locus-tag class description FIV04_RS00005 PF11638 DnaA N-terminal domain FIV04_RS00005 PF00308 Bacterial dnaA protein FIV04_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix FIV04_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain FIV04_RS00010 PF02767 DNA polymerase III beta subunit, central domain FIV04_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain FIV04_RS00015 PF02463 RecF/RecN/SMC N terminal domain FIV04_RS00020 PF01751 Toprim domain FIV04_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS00020 PF18053 DNA gyrase B subunit insert domain FIV04_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus FIV04_RS00020 PF00204 DNA gyrase B FIV04_RS00025 PF00011 Hsp20/alpha crystallin family FIV04_RS00030 PF00155 Aminotransferase class I and II FIV04_RS00035 PF00128 Alpha amylase, catalytic domain FIV04_RS00040 PF05746 DALR anticodon binding domain FIV04_RS00040 PF02092 Glycyl-tRNA synthetase beta subunit FIV04_RS00045 PF02091 Glycyl-tRNA synthetase alpha subunit FIV04_RS00050 PF01169 Uncharacterized protein family UPF0016 FIV04_RS00060 PF01206 Sulfurtransferase TusA FIV04_RS00070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS00070 PF03466 LysR substrate binding domain FIV04_RS00075 PF00107 Zinc-binding dehydrogenase FIV04_RS00075 PF08240 Alcohol dehydrogenase GroES-like domain FIV04_RS00080 PF00108 Thiolase, N-terminal domain FIV04_RS00080 PF02803 Thiolase, C-terminal domain FIV04_RS00085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FIV04_RS00085 PF00378 Enoyl-CoA hydratase/isomerase FIV04_RS00085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FIV04_RS00090 PF01205 Uncharacterized protein family UPF0029 FIV04_RS00090 PF09186 Domain of unknown function (DUF1949) FIV04_RS00095 PF02386 Cation transport protein FIV04_RS00100 PF12724 Flavodoxin domain FIV04_RS00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS00140 PF03466 LysR substrate binding domain FIV04_RS00145 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FIV04_RS00145 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FIV04_RS00150 PF04380 Membrane fusogenic activity FIV04_RS00155 PF00873 AcrB/AcrD/AcrF family FIV04_RS00160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV04_RS00165 PF00440 Bacterial regulatory proteins, tetR family FIV04_RS00170 PF13361 UvrD-like helicase C-terminal domain FIV04_RS00170 PF00580 UvrD/REP helicase N-terminal domain FIV04_RS00175 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FIV04_RS00205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV04_RS00205 PF00005 ABC transporter FIV04_RS00210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV04_RS00215 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS00220 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV04_RS00220 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS00260 PF00069 Protein kinase domain FIV04_RS00265 PF03116 NQR2, RnfD, RnfE family FIV04_RS00275 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS00275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV04_RS00285 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FIV04_RS00290 PF01432 Peptidase family M3 FIV04_RS00295 PF01037 Lrp/AsnC ligand binding domain FIV04_RS00300 PF00563 EAL domain FIV04_RS00300 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS00300 PF08448 PAS fold FIV04_RS00305 PF04445 Putative SAM-dependent methyltransferase FIV04_RS00315 PF00892 EamA-like transporter family FIV04_RS00320 PF00582 Universal stress protein family FIV04_RS00325 PF00210 Ferritin-like domain FIV04_RS00330 PF10625 Universal stress protein B (UspB) FIV04_RS00345 PF02646 RmuC family FIV04_RS00350 PF01209 ubiE/COQ5 methyltransferase family FIV04_RS00355 PF02036 SCP-2 sterol transfer family FIV04_RS00360 PF03109 ABC1 family FIV04_RS00365 PF02416 mttA/Hcf106 family FIV04_RS00370 PF02416 mttA/Hcf106 family FIV04_RS00375 PF00902 Sec-independent protein translocase protein (TatC) FIV04_RS00380 PF01026 TatD related DNase FIV04_RS00385 PF00490 Delta-aminolevulinic acid dehydratase FIV04_RS00395 PF00476 DNA polymerase family A FIV04_RS00395 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FIV04_RS00395 PF01367 5'-3' exonuclease, C-terminal SAM fold FIV04_RS00395 PF01612 3'-5' exonuclease FIV04_RS00405 PF01926 50S ribosome-binding GTPase FIV04_RS00410 PF00034 Cytochrome c FIV04_RS00420 PF04220 Der GTPase activator (YihI) FIV04_RS00430 PF06969 HemN C-terminal domain FIV04_RS00430 PF04055 Radical SAM superfamily FIV04_RS00435 PF03707 Bacterial signalling protein N terminal repeat FIV04_RS00435 PF00563 EAL domain FIV04_RS00435 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS00440 PF02954 Bacterial regulatory protein, Fis family FIV04_RS00440 PF00072 Response regulator receiver domain FIV04_RS00440 PF00158 Sigma-54 interaction domain FIV04_RS00445 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS00445 PF00989 PAS fold FIV04_RS00445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS00455 PF00120 Glutamine synthetase, catalytic domain FIV04_RS00455 PF03951 Glutamine synthetase, beta-Grasp domain FIV04_RS00460 PF00679 Elongation factor G C-terminus FIV04_RS00460 PF00009 Elongation factor Tu GTP binding domain FIV04_RS00460 PF03144 Elongation factor Tu domain 2 FIV04_RS00475 PF03631 Virulence factor BrkB FIV04_RS00480 PF02580 D-Tyr-tRNA(Tyr) deacylase FIV04_RS00485 PF00583 Acetyltransferase (GNAT) family FIV04_RS00485 PF09500 Putative thioesterase (yiiD_Cterm) FIV04_RS00495 PF01293 Phosphoenolpyruvate carboxykinase FIV04_RS00500 PF01430 Hsp33 protein FIV04_RS00505 PF01479 S4 domain FIV04_RS00510 PF11356 Type II secretion system protein C FIV04_RS00515 PF03958 Bacterial type II/III secretion system short domain FIV04_RS00515 PF00263 Bacterial type II and III secretion system protein FIV04_RS00520 PF00437 Type II/IV secretion system protein FIV04_RS00525 PF00482 Type II secretion system (T2SS), protein F FIV04_RS00530 PF08334 Type II secretion system (T2SS), protein G FIV04_RS00530 PF07963 Prokaryotic N-terminal methylation motif FIV04_RS00535 PF12019 Type II transport protein GspH FIV04_RS00540 PF07963 Prokaryotic N-terminal methylation motif FIV04_RS00540 PF02501 Type II secretion system (T2SS), protein I FIV04_RS00545 PF07963 Prokaryotic N-terminal methylation motif FIV04_RS00545 PF11612 Type II secretion system (T2SS), protein J FIV04_RS00550 PF03934 Type II secretion system (T2SS), protein K FIV04_RS00555 PF05134 Type II secretion system (T2SS), protein L FIV04_RS00555 PF12693 GspL periplasmic domain FIV04_RS00560 PF04612 Type II secretion system (T2SS), protein M FIV04_RS00565 PF01203 Type II secretion system (T2SS), protein N FIV04_RS00570 PF00459 Inositol monophosphatase family FIV04_RS00575 PF00293 NUDIX domain FIV04_RS00580 PF01106 NifU-like domain FIV04_RS00580 PF01521 Iron-sulphur cluster biosynthesis FIV04_RS00585 PF00156 Phosphoribosyl transferase domain FIV04_RS00590 PF00561 alpha/beta hydrolase fold FIV04_RS00600 PF17674 HHH domain FIV04_RS00600 PF09371 Tex-like protein N-terminal domain FIV04_RS00600 PF00575 S1 RNA binding domain FIV04_RS00600 PF16921 Tex protein YqgF-like domain FIV04_RS00605 PF03449 Transcription elongation factor, N-terminal FIV04_RS00605 PF01272 Transcription elongation factor, GreA/GreB, C-term FIV04_RS00610 PF00072 Response regulator receiver domain FIV04_RS00610 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS00615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS00615 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS00615 PF00672 HAMP domain FIV04_RS00620 PF00270 DEAD/DEAH box helicase FIV04_RS00620 PF17191 RecG wedge domain FIV04_RS00620 PF00271 Helicase conserved C-terminal domain FIV04_RS00625 PF02824 TGS domain FIV04_RS00625 PF04607 Region found in RelA / SpoT proteins FIV04_RS00625 PF13291 ACT domain FIV04_RS00630 PF01192 RNA polymerase Rpb6 FIV04_RS00635 PF00625 Guanylate kinase FIV04_RS00640 PF00860 Permease family FIV04_RS00665 PF03755 YicC-like family, N-terminal region FIV04_RS00665 PF08340 Domain of unknown function (DUF1732) FIV04_RS00670 PF03725 3' exoribonuclease family, domain 2 FIV04_RS00670 PF01138 3' exoribonuclease family, domain 1 FIV04_RS00675 PF00156 Phosphoribosyl transferase domain FIV04_RS00680 PF03279 Bacterial lipid A biosynthesis acyltransferase FIV04_RS00685 PF00440 Bacterial regulatory proteins, tetR family FIV04_RS00690 PF04127 DNA / pantothenate metabolism flavoprotein FIV04_RS00690 PF02441 Flavoprotein FIV04_RS00695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS00695 PF17200 Single Cache domain 2 FIV04_RS00695 PF00672 HAMP domain FIV04_RS00700 PF04002 RadC-like JAB domain FIV04_RS00705 PF00830 Ribosomal L28 family FIV04_RS00710 PF00471 Ribosomal protein L33 FIV04_RS00725 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FIV04_RS00725 PF06827 Zinc finger found in FPG and IleRS FIV04_RS00725 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FIV04_RS00735 PF01467 Cytidylyltransferase-like FIV04_RS00740 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FIV04_RS00745 PF00535 Glycosyl transferase family 2 FIV04_RS00750 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FIV04_RS00755 PF01219 Prokaryotic diacylglycerol kinase FIV04_RS00765 PF00884 Sulfatase FIV04_RS00765 PF11893 Domain of unknown function (DUF3413) FIV04_RS00770 PF16363 GDP-mannose 4,6 dehydratase FIV04_RS00775 PF00483 Nucleotidyl transferase FIV04_RS00780 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FIV04_RS00785 PF00793 DAHP synthetase I family FIV04_RS00790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV04_RS00790 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FIV04_RS00800 PF00535 Glycosyl transferase family 2 FIV04_RS00805 PF00535 Glycosyl transferase family 2 FIV04_RS00810 PF00534 Glycosyl transferases group 1 FIV04_RS00810 PF13439 Glycosyltransferase Family 4 FIV04_RS00815 PF02719 Polysaccharide biosynthesis protein FIV04_RS00820 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FIV04_RS00825 PF02350 UDP-N-acetylglucosamine 2-epimerase FIV04_RS00830 PF08666 SAF domain FIV04_RS00830 PF03102 NeuB family FIV04_RS00840 PF00483 Nucleotidyl transferase FIV04_RS00850 PF02348 Cytidylyltransferase FIV04_RS00870 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FIV04_RS00875 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FIV04_RS00880 PF03279 Bacterial lipid A biosynthesis acyltransferase FIV04_RS00885 PF01370 NAD dependent epimerase/dehydratase family FIV04_RS00890 PF08360 QacR-like protein, C-terminal region FIV04_RS00890 PF00440 Bacterial regulatory proteins, tetR family FIV04_RS00895 PF01551 Peptidase family M23 FIV04_RS00900 PF00132 Bacterial transferase hexapeptide (six repeats) FIV04_RS00900 PF06426 Serine acetyltransferase, N-terminal FIV04_RS00905 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FIV04_RS00905 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FIV04_RS00910 PF02556 Preprotein translocase subunit SecB FIV04_RS00915 PF00581 Rhodanese-like domain FIV04_RS00925 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF FIV04_RS00935 PF06082 Exopolysaccharide biosynthesis protein YbjH FIV04_RS00940 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FIV04_RS00940 PF02563 Polysaccharide biosynthesis/export protein FIV04_RS00940 PF10531 SLBB domain FIV04_RS00945 PF01451 Low molecular weight phosphotyrosine protein phosphatase FIV04_RS00950 PF02706 Chain length determinant protein FIV04_RS00950 PF13614 AAA domain FIV04_RS00950 PF13807 G-rich domain on putative tyrosine kinase FIV04_RS00955 PF02350 UDP-N-acetylglucosamine 2-epimerase FIV04_RS00960 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FIV04_RS00960 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FIV04_RS00960 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FIV04_RS00965 PF03102 NeuB family FIV04_RS00965 PF08666 SAF domain FIV04_RS00970 PF02350 UDP-N-acetylglucosamine 2-epimerase FIV04_RS00975 PF02348 Cytidylyltransferase FIV04_RS00995 PF00132 Bacterial transferase hexapeptide (six repeats) FIV04_RS01025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FIV04_RS01025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV04_RS01040 PF01370 NAD dependent epimerase/dehydratase family FIV04_RS01045 PF02397 Bacterial sugar transferase FIV04_RS01050 PF02719 Polysaccharide biosynthesis protein FIV04_RS01055 PF01676 Metalloenzyme superfamily FIV04_RS01055 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FIV04_RS01060 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FIV04_RS01060 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FIV04_RS01065 PF01554 MatE FIV04_RS01070 PF00166 Chaperonin 10 Kd subunit FIV04_RS01075 PF00118 TCP-1/cpn60 chaperonin family FIV04_RS01090 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS01095 PF02308 MgtC family FIV04_RS01100 PF14245 Type IV pilin PilA FIV04_RS01100 PF07963 Prokaryotic N-terminal methylation motif FIV04_RS01105 PF04055 Radical SAM superfamily FIV04_RS01110 PF01132 Elongation factor P (EF-P) OB domain FIV04_RS01110 PF08207 Elongation factor P (EF-P) KOW-like domain FIV04_RS01110 PF09285 Elongation factor P, C-terminal FIV04_RS01125 PF02313 Fumarate reductase subunit D FIV04_RS01130 PF02300 Fumarate reductase subunit C FIV04_RS01135 PF13085 2Fe-2S iron-sulfur cluster binding domain FIV04_RS01135 PF13183 4Fe-4S dicluster domain FIV04_RS01140 PF02910 Fumarate reductase flavoprotein C-term FIV04_RS01140 PF00890 FAD binding domain FIV04_RS01145 PF00152 tRNA synthetases class II (D, K and N) FIV04_RS01155 PF03600 Citrate transporter FIV04_RS01155 PF02080 TrkA-C domain FIV04_RS01160 PF02666 Phosphatidylserine decarboxylase FIV04_RS01165 PF03193 RsgA GTPase FIV04_RS01170 PF00929 Exonuclease FIV04_RS01245 PF08331 Domain of unknown function (DUF1730) FIV04_RS01250 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FIV04_RS01255 PF01520 N-acetylmuramoyl-L-alanine amidase FIV04_RS01260 PF08676 MutL C terminal dimerisation domain FIV04_RS01260 PF01119 DNA mismatch repair protein, C-terminal domain FIV04_RS01270 PF17209 Hfq protein FIV04_RS01275 PF16360 GTP-binding GTPase Middle Region FIV04_RS01275 PF01926 50S ribosome-binding GTPase FIV04_RS01275 PF13167 GTP-binding GTPase N-terminal FIV04_RS01280 PF12221 Bacterial membrane protein N terminal FIV04_RS01280 PF01145 SPFH domain / Band 7 family FIV04_RS01285 PF01145 SPFH domain / Band 7 family FIV04_RS01290 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FIV04_RS01295 PF00709 Adenylosuccinate synthetase FIV04_RS01305 PF08238 Sel1 repeat FIV04_RS01310 PF01979 Amidohydrolase family FIV04_RS01315 PF00773 RNB domain FIV04_RS01315 PF08461 Ribonuclease R winged-helix domain FIV04_RS01315 PF17876 Cold shock domain FIV04_RS01315 PF00575 S1 RNA binding domain FIV04_RS01315 PF08206 Ribonuclease B OB domain FIV04_RS01320 PF08032 RNA 2'-O ribose methyltransferase substrate binding FIV04_RS01320 PF00588 SpoU rRNA Methylase family FIV04_RS01325 PF01250 Ribosomal protein S6 FIV04_RS01330 PF01084 Ribosomal protein S18 FIV04_RS01335 PF01281 Ribosomal protein L9, N-terminal domain FIV04_RS01335 PF03948 Ribosomal protein L9, C-terminal domain FIV04_RS01345 PF00772 DnaB-like helicase N terminal domain FIV04_RS01345 PF03796 DnaB-like helicase C terminal domain FIV04_RS01350 PF01168 Alanine racemase, N-terminal domain FIV04_RS01350 PF00842 Alanine racemase, C-terminal domain FIV04_RS01360 PF01894 Uncharacterised protein family UPF0047 FIV04_RS01365 PF00342 Phosphoglucose isomerase FIV04_RS01375 PF01475 Ferric uptake regulator family FIV04_RS01380 PF01207 Dihydrouridine synthase (Dus) FIV04_RS01400 PF00667 FAD binding domain FIV04_RS01400 PF00175 Oxidoreductase NAD-binding domain FIV04_RS01400 PF00258 Flavodoxin FIV04_RS01405 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FIV04_RS01405 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FIV04_RS01410 PF01507 Phosphoadenosine phosphosulfate reductase family FIV04_RS01495 PF00999 Sodium/hydrogen exchanger family FIV04_RS01500 PF02310 B12 binding domain FIV04_RS01500 PF02607 B12 binding domain FIV04_RS01500 PF02965 Vitamin B12 dependent methionine synthase, activation domain FIV04_RS01500 PF00809 Pterin binding enzyme FIV04_RS01500 PF02574 Homocysteine S-methyltransferase FIV04_RS01505 PF01842 ACT domain FIV04_RS01505 PF00696 Amino acid kinase family FIV04_RS01510 PF00266 Aminotransferase class-V FIV04_RS01520 PF17760 UvrA interaction domain FIV04_RS01520 PF00005 ABC transporter FIV04_RS01520 PF17755 UvrA DNA-binding domain FIV04_RS01525 PF00483 Nucleotidyl transferase FIV04_RS01530 PF00196 Bacterial regulatory proteins, luxR family FIV04_RS01535 PF00436 Single-strand binding protein family FIV04_RS01540 PF17157 Gammaproteobacterial periplasmic sensor domain FIV04_RS01540 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS01540 PF00563 EAL domain FIV04_RS01560 PF03958 Bacterial type II/III secretion system short domain FIV04_RS01560 PF11741 AMIN domain FIV04_RS01560 PF00263 Bacterial type II and III secretion system protein FIV04_RS01560 PF07660 Secretin and TonB N terminus short domain FIV04_RS01565 PF13401 AAA domain FIV04_RS01565 PF01471 Putative peptidoglycan binding domain FIV04_RS01575 PF00437 Type II/IV secretion system protein FIV04_RS01575 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FIV04_RS01580 PF00482 Type II secretion system (T2SS), protein F FIV04_RS01590 PF07963 Prokaryotic N-terminal methylation motif FIV04_RS01595 PF07963 Prokaryotic N-terminal methylation motif FIV04_RS01630 PF04085 rod shape-determining protein MreC FIV04_RS01635 PF04093 rod shape-determining protein MreD FIV04_RS01640 PF02545 Maf-like protein FIV04_RS01645 PF10150 Ribonuclease E/G family FIV04_RS01645 PF00575 S1 RNA binding domain FIV04_RS01655 PF00795 Carbon-nitrogen hydrolase FIV04_RS01660 PF01523 Putative modulator of DNA gyrase FIV04_RS01665 PF02562 PhoH-like protein FIV04_RS01665 PF13638 PIN domain FIV04_RS01670 PF18337 RapA N-terminal Tudor like domain FIV04_RS01670 PF18339 RapA N-terminal Tudor like domain 1 FIV04_RS01670 PF00176 SNF2 family N-terminal domain FIV04_RS01670 PF12137 RNA polymerase recycling family C-terminal FIV04_RS01670 PF00271 Helicase conserved C-terminal domain FIV04_RS01675 PF00849 RNA pseudouridylate synthase FIV04_RS01680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIV04_RS01680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIV04_RS01685 PF00582 Universal stress protein family FIV04_RS01695 PF16868 NMT1-like family FIV04_RS01700 PF02863 Arginine repressor, C-terminal domain FIV04_RS01700 PF01316 Arginine repressor, DNA binding domain FIV04_RS01705 PF00056 lactate/malate dehydrogenase, NAD binding domain FIV04_RS01705 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FIV04_RS01715 PF00348 Polyprenyl synthetase FIV04_RS01725 PF00829 Ribosomal prokaryotic L21 protein FIV04_RS01730 PF01016 Ribosomal L27 protein FIV04_RS01735 PF01926 50S ribosome-binding GTPase FIV04_RS01735 PF01018 GTP1/OBG FIV04_RS01740 PF06738 Putative threonine/serine exporter FIV04_RS01745 PF12821 Threonine/Serine exporter, ThrE FIV04_RS01750 PF00186 Dihydrofolate reductase FIV04_RS01755 PF00149 Calcineurin-like phosphoesterase FIV04_RS01760 PF04379 ApaG domain FIV04_RS01765 PF00398 Ribosomal RNA adenine dimethylase FIV04_RS01770 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FIV04_RS01775 PF00639 PPIC-type PPIASE domain FIV04_RS01775 PF09312 SurA N-terminal domain FIV04_RS01780 PF04453 LPS transport system D FIV04_RS01780 PF03968 OstA-like protein FIV04_RS01785 PF00226 DnaJ domain FIV04_RS01785 PF05099 Tellurite resistance protein TerB FIV04_RS01800 PF00694 Aconitase C-terminal domain FIV04_RS01805 PF00330 Aconitase family (aconitate hydratase) FIV04_RS01810 PF00180 Isocitrate/isopropylmalate dehydrogenase FIV04_RS01815 PF00682 HMGL-like FIV04_RS01815 PF08502 LeuA allosteric (dimerisation) domain FIV04_RS01830 PF00873 AcrB/AcrD/AcrF family FIV04_RS01835 PF01569 PAP2 superfamily FIV04_RS01845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS01845 PF03466 LysR substrate binding domain FIV04_RS01850 PF00501 AMP-binding enzyme FIV04_RS01855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIV04_RS01855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIV04_RS01855 PF00205 Thiamine pyrophosphate enzyme, central domain FIV04_RS01860 PF10369 Small subunit of acetolactate synthase FIV04_RS01865 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS01875 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS01875 PF07729 FCD domain FIV04_RS01880 PF02887 Pyruvate kinase, alpha/beta domain FIV04_RS01880 PF00224 Pyruvate kinase, barrel domain FIV04_RS01885 PF00455 DeoR C terminal sensor domain FIV04_RS01885 PF08220 DeoR-like helix-turn-helix domain FIV04_RS01890 PF01380 SIS domain FIV04_RS01895 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV04_RS01900 PF01053 Cys/Met metabolism PLP-dependent enzyme FIV04_RS01910 PF04546 Sigma-70, non-essential region FIV04_RS01910 PF03979 Sigma-70 factor, region 1.1 FIV04_RS01910 PF04545 Sigma-70, region 4 FIV04_RS01910 PF04539 Sigma-70 region 3 FIV04_RS01910 PF04542 Sigma-70 region 2 FIV04_RS01910 PF00140 Sigma-70 factor, region 1.2 FIV04_RS01915 PF10410 DnaB-helicase binding domain of primase FIV04_RS01915 PF01807 CHC2 zinc finger FIV04_RS01915 PF08275 DNA primase catalytic core, N-terminal domain FIV04_RS01915 PF08278 DNA primase DnaG DnaB-binding FIV04_RS01920 PF09424 Yqey-like protein FIV04_RS01925 PF01165 Ribosomal protein S21 FIV04_RS01930 PF00814 Glycoprotease family FIV04_RS01935 PF12697 Alpha/beta hydrolase family FIV04_RS01940 PF02660 Glycerol-3-phosphate acyltransferase FIV04_RS01945 PF02152 Dihydroneopterin aldolase FIV04_RS01955 PF02673 Bacitracin resistance protein BacA FIV04_RS01960 PF01966 HD domain FIV04_RS01960 PF01743 Poly A polymerase head domain FIV04_RS01960 PF12627 Probable RNA and SrmB- binding site of polymerase A FIV04_RS01965 PF01471 Putative peptidoglycan binding domain FIV04_RS01965 PF13401 AAA domain FIV04_RS01975 PF08239 Bacterial SH3 domain FIV04_RS01980 PF01384 Phosphate transporter family FIV04_RS01985 PF01865 Protein of unknown function DUF47 FIV04_RS01990 PF01928 CYTH domain FIV04_RS01995 PF07885 Ion channel FIV04_RS02000 PF02743 Cache domain FIV04_RS02000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS02000 PF00672 HAMP domain FIV04_RS02005 PF08335 GlnD PII-uridylyltransferase FIV04_RS02005 PF03710 Glutamate-ammonia ligase adenylyltransferase FIV04_RS02010 PF01467 Cytidylyltransferase-like FIV04_RS02010 PF00294 pfkB family carbohydrate kinase FIV04_RS02015 PF02321 Outer membrane efflux protein FIV04_RS02020 PF00293 NUDIX domain FIV04_RS02025 PF06853 Protein of unknown function (DUF1249) FIV04_RS02030 PF00149 Calcineurin-like phosphoesterase FIV04_RS02035 PF05728 Uncharacterised protein family (UPF0227) FIV04_RS02040 PF01751 Toprim domain FIV04_RS02040 PF00204 DNA gyrase B FIV04_RS02040 PF00986 DNA gyrase B subunit, carboxyl terminus FIV04_RS02040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS02045 PF03989 DNA gyrase C-terminal domain, beta-propeller FIV04_RS02045 PF00521 DNA gyrase/topoisomerase IV, subunit A FIV04_RS02050 PF13180 PDZ domain FIV04_RS02055 PF00595 PDZ domain FIV04_RS02055 PF13180 PDZ domain FIV04_RS02060 PF06295 Protein of unknown function (DUF1043) FIV04_RS02065 PF03969 AFG1-like ATPase FIV04_RS02075 PF00572 Ribosomal protein L13 FIV04_RS02080 PF00380 Ribosomal protein S9/S16 FIV04_RS02085 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FIV04_RS02085 PF00355 Rieske [2Fe-2S] domain FIV04_RS02090 PF00032 Cytochrome b(C-terminal)/b6/petD FIV04_RS02090 PF00033 Cytochrome b/b6/petB FIV04_RS02095 PF02167 Cytochrome C1 family FIV04_RS02100 PF02798 Glutathione S-transferase, N-terminal domain FIV04_RS02100 PF00043 Glutathione S-transferase, C-terminal domain FIV04_RS02105 PF04386 Stringent starvation protein B FIV04_RS02110 PF04972 BON domain FIV04_RS02115 PF13580 SIS domain FIV04_RS02120 PF02021 Uncharacterised protein family UPF0102 FIV04_RS02125 PF04348 LppC putative lipoprotein FIV04_RS02130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FIV04_RS02140 PF01795 MraW methylase family FIV04_RS02145 PF04999 Cell division protein FtsL FIV04_RS02150 PF00905 Penicillin binding protein transpeptidase domain FIV04_RS02150 PF03717 Penicillin-binding Protein dimerisation domain FIV04_RS02155 PF08245 Mur ligase middle domain FIV04_RS02155 PF01225 Mur ligase family, catalytic domain FIV04_RS02155 PF02875 Mur ligase family, glutamate ligase domain FIV04_RS02160 PF08245 Mur ligase middle domain FIV04_RS02160 PF02875 Mur ligase family, glutamate ligase domain FIV04_RS02160 PF01225 Mur ligase family, catalytic domain FIV04_RS02165 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FIV04_RS02165 PF00953 Glycosyl transferase family 4 FIV04_RS02170 PF08245 Mur ligase middle domain FIV04_RS02170 PF02875 Mur ligase family, glutamate ligase domain FIV04_RS02175 PF01098 Cell cycle protein FIV04_RS02180 PF04101 Glycosyltransferase family 28 C-terminal domain FIV04_RS02180 PF03033 Glycosyltransferase family 28 N-terminal domain FIV04_RS02185 PF01225 Mur ligase family, catalytic domain FIV04_RS02185 PF08245 Mur ligase middle domain FIV04_RS02185 PF02875 Mur ligase family, glutamate ligase domain FIV04_RS02195 PF08478 POTRA domain, FtsQ-type FIV04_RS02195 PF03799 Cell division protein FtsQ FIV04_RS02200 PF02491 SHS2 domain inserted in FTSA FIV04_RS02205 PF00091 Tubulin/FtsZ family, GTPase domain FIV04_RS02205 PF12327 FtsZ family, C-terminal domain FIV04_RS02210 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FIV04_RS02215 PF01043 SecA preprotein cross-linking domain FIV04_RS02215 PF07516 SecA Wing and Scaffold domain FIV04_RS02215 PF02810 SEC-C motif FIV04_RS02215 PF07517 SecA DEAD-like domain FIV04_RS02220 PF00293 NUDIX domain FIV04_RS02225 PF05173 Dihydrodipicolinate reductase, C-terminus FIV04_RS02225 PF01113 Dihydrodipicolinate reductase, N-terminus FIV04_RS02230 PF00117 Glutamine amidotransferase class-I FIV04_RS02230 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FIV04_RS02235 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FIV04_RS02235 PF02142 MGS-like domain FIV04_RS02235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FIV04_RS02240 PF01925 Sulfite exporter TauE/SafE FIV04_RS02245 PF03466 LysR substrate binding domain FIV04_RS02245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS02260 PF03458 UPF0126 domain FIV04_RS02265 PF01497 Periplasmic binding protein FIV04_RS02275 PF01048 Phosphorylase superfamily FIV04_RS02285 PF00667 FAD binding domain FIV04_RS02285 PF00175 Oxidoreductase NAD-binding domain FIV04_RS02285 PF00258 Flavodoxin FIV04_RS02290 PF01645 Conserved region in glutamate synthase FIV04_RS02290 PF04898 Glutamate synthase central domain FIV04_RS02290 PF01493 GXGXG motif FIV04_RS02290 PF00310 Glutamine amidotransferases class-II FIV04_RS02295 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS02295 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FIV04_RS02300 PF01493 GXGXG motif FIV04_RS02300 PF04898 Glutamate synthase central domain FIV04_RS02300 PF00310 Glutamine amidotransferases class-II FIV04_RS02300 PF01645 Conserved region in glutamate synthase FIV04_RS02305 PF04055 Radical SAM superfamily FIV04_RS02305 PF16199 Radical_SAM C-terminal domain FIV04_RS02310 PF00563 EAL domain FIV04_RS02310 PF01590 GAF domain FIV04_RS02310 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS02310 PF00360 Phytochrome region FIV04_RS02315 PF00989 PAS fold FIV04_RS02315 PF00072 Response regulator receiver domain FIV04_RS02315 PF01627 Hpt domain FIV04_RS02315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS02315 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS02315 PF18415 Histidine kinase receptor ArcB trans-membrane domain FIV04_RS02325 PF00072 Response regulator receiver domain FIV04_RS02325 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS02330 PF03737 Aldolase/RraA FIV04_RS02340 PF00696 Amino acid kinase family FIV04_RS02340 PF01842 ACT domain FIV04_RS02340 PF13840 ACT domain FIV04_RS02340 PF03447 Homoserine dehydrogenase, NAD binding domain FIV04_RS02340 PF00742 Homoserine dehydrogenase FIV04_RS02345 PF08544 GHMP kinases C terminal FIV04_RS02345 PF00288 GHMP kinases N terminal domain FIV04_RS02350 PF00291 Pyridoxal-phosphate dependent enzyme FIV04_RS02350 PF14821 Threonine synthase N terminus FIV04_RS02355 PF03358 NADPH-dependent FMN reductase FIV04_RS02360 PF01228 Glycine radical FIV04_RS02365 PF01261 Xylose isomerase-like TIM barrel FIV04_RS02370 PF03167 Uracil DNA glycosylase superfamily FIV04_RS02385 PF01235 Sodium:alanine symporter family FIV04_RS02390 PF03883 Peroxide stress protein YaaA FIV04_RS02395 PF00271 Helicase conserved C-terminal domain FIV04_RS02395 PF00270 DEAD/DEAH box helicase FIV04_RS02400 PF05175 Methyltransferase small domain FIV04_RS02405 PF05525 Branched-chain amino acid transport protein FIV04_RS02410 PF00258 Flavodoxin FIV04_RS02415 PF00589 Phage integrase family FIV04_RS02415 PF02899 Phage integrase, N-terminal SAM-like domain FIV04_RS02420 PF13098 Thioredoxin-like domain FIV04_RS02420 PF10411 Disulfide bond isomerase protein N-terminus FIV04_RS02425 PF17768 RecJ OB domain FIV04_RS02425 PF02272 DHHA1 domain FIV04_RS02425 PF01368 DHH family FIV04_RS02435 PF00152 tRNA synthetases class II (D, K and N) FIV04_RS02435 PF01336 OB-fold nucleic acid binding domain FIV04_RS02440 PF00158 Sigma-54 interaction domain FIV04_RS02440 PF06505 Activator of aromatic catabolism FIV04_RS02440 PF02830 V4R domain FIV04_RS02440 PF02954 Bacterial regulatory protein, Fis family FIV04_RS02460 PF02976 DNA mismatch repair enzyme MutH FIV04_RS02465 PF00293 NUDIX domain FIV04_RS02470 PF02896 PEP-utilising enzyme, TIM barrel domain FIV04_RS02470 PF00391 PEP-utilising enzyme, mobile domain FIV04_RS02470 PF05524 PEP-utilising enzyme, N-terminal FIV04_RS02470 PF01590 GAF domain FIV04_RS02475 PF01925 Sulfite exporter TauE/SafE FIV04_RS02480 PF01790 Prolipoprotein diacylglyceryl transferase FIV04_RS02485 PF00303 Thymidylate synthase FIV04_RS02490 PF02690 Na+/Pi-cotransporter FIV04_RS02495 PF03466 LysR substrate binding domain FIV04_RS02495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS02500 PF01022 Bacterial regulatory protein, arsR family FIV04_RS02505 PF01649 Ribosomal protein S20 FIV04_RS02510 PF03023 Lipid II flippase MurJ FIV04_RS02515 PF06574 FAD synthetase FIV04_RS02515 PF01687 Riboflavin kinase FIV04_RS02520 PF08264 Anticodon-binding domain of tRNA FIV04_RS02520 PF00133 tRNA synthetases class I (I, L, M and V) FIV04_RS02520 PF06827 Zinc finger found in FPG and IleRS FIV04_RS02525 PF01252 Signal peptidase (SPase) II FIV04_RS02530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIV04_RS02535 PF02401 LytB protein FIV04_RS02540 PF00072 Response regulator receiver domain FIV04_RS02540 PF04397 LytTr DNA-binding domain FIV04_RS02545 PF06580 Histidine kinase FIV04_RS02545 PF07694 5TMR of 5TMR-LYT FIV04_RS02550 PF02554 Carbon starvation protein CstA FIV04_RS02560 PF13580 SIS domain FIV04_RS02565 PF03702 Anhydro-N-acetylmuramic acid kinase FIV04_RS02570 PF00933 Glycosyl hydrolase family 3 N terminal domain FIV04_RS02575 PF00793 DAHP synthetase I family FIV04_RS02580 PF01817 Chorismate mutase type II FIV04_RS02580 PF02153 Prephenate dehydrogenase FIV04_RS02585 PF04225 Opacity-associated protein A LysM-like domain FIV04_RS02585 PF01551 Peptidase family M23 FIV04_RS02590 PF07238 PilZ domain FIV04_RS02595 PF12848 ABC transporter FIV04_RS02595 PF00005 ABC transporter FIV04_RS02600 PF01464 Transglycosylase SLT domain FIV04_RS02600 PF14718 Soluble lytic murein transglycosylase L domain FIV04_RS02605 PF01371 Trp repressor protein FIV04_RS02610 PF01931 Protein of unknown function DUF84 FIV04_RS02615 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS02615 PF00563 EAL domain FIV04_RS02620 PF13416 Bacterial extracellular solute-binding protein FIV04_RS02625 PF01817 Chorismate mutase type II FIV04_RS02625 PF00800 Prephenate dehydratase FIV04_RS02630 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FIV04_RS02635 PF01464 Transglycosylase SLT domain FIV04_RS02640 PF13525 Outer membrane lipoprotein FIV04_RS02645 PF00849 RNA pseudouridylate synthase FIV04_RS02645 PF01479 S4 domain FIV04_RS02650 PF02578 Multi-copper polyphenol oxidoreductase laccase FIV04_RS02655 PF02861 Clp amino terminal domain, pathogenicity island component FIV04_RS02655 PF17871 AAA lid domain FIV04_RS02655 PF10431 C-terminal, D2-small domain, of ClpB protein FIV04_RS02655 PF00004 ATPase family associated with various cellular activities (AAA) FIV04_RS02655 PF07724 AAA domain (Cdc48 subfamily) FIV04_RS02695 PF03411 Penicillin-insensitive murein endopeptidase FIV04_RS02705 PF12838 4Fe-4S dicluster domain FIV04_RS02710 PF16325 Peptidase family U32 C-terminal domain FIV04_RS02710 PF01136 Peptidase family U32 FIV04_RS02715 PF04381 Putative exonuclease, RdgC FIV04_RS02720 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS02720 PF00072 Response regulator receiver domain FIV04_RS02725 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS02725 PF11808 Phosphate regulon sensor protein PhoR FIV04_RS02725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS02725 PF00989 PAS fold FIV04_RS02730 PF12849 PBP superfamily domain FIV04_RS02735 PF02541 Ppx/GppA phosphatase family FIV04_RS02740 PF13089 Polyphosphate kinase N-terminal domain FIV04_RS02740 PF17941 Polyphosphate kinase C-terminal domain 1 FIV04_RS02740 PF13090 Polyphosphate kinase C-terminal domain 2 FIV04_RS02740 PF02503 Polyphosphate kinase middle domain FIV04_RS02745 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS02750 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS02755 PF00005 ABC transporter FIV04_RS02760 PF01895 PhoU domain FIV04_RS02775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS02775 PF03466 LysR substrate binding domain FIV04_RS02780 PF03932 CutC family FIV04_RS02785 PF00578 AhpC/TSA family FIV04_RS02785 PF10417 C-terminal domain of 1-Cys peroxiredoxin FIV04_RS02790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS02790 PF03466 LysR substrate binding domain FIV04_RS02795 PF00571 CBS domain FIV04_RS02800 PF02547 Queuosine biosynthesis protein FIV04_RS02805 PF01702 Queuine tRNA-ribosyltransferase FIV04_RS02810 PF02699 Preprotein translocase subunit FIV04_RS02815 PF07549 SecD/SecF GG Motif FIV04_RS02815 PF02355 Protein export membrane protein FIV04_RS02815 PF13721 SecD export protein N-terminal TM region FIV04_RS02820 PF02355 Protein export membrane protein FIV04_RS02820 PF07549 SecD/SecF GG Motif FIV04_RS02825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS02825 PF03466 LysR substrate binding domain FIV04_RS02835 PF00459 Inositol monophosphatase family FIV04_RS02840 PF00588 SpoU rRNA Methylase family FIV04_RS02845 PF02082 Transcriptional regulator FIV04_RS02850 PF00266 Aminotransferase class-V FIV04_RS02855 PF01592 NifU-like N terminal domain FIV04_RS02860 PF01521 Iron-sulphur cluster biosynthesis FIV04_RS02865 PF00226 DnaJ domain FIV04_RS02865 PF07743 HSCB C-terminal oligomerisation domain FIV04_RS02870 PF00012 Hsp70 protein FIV04_RS02875 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV04_RS02880 PF04384 Iron-sulphur cluster assembly FIV04_RS02885 PF00883 Cytosol aminopeptidase family, catalytic domain FIV04_RS02885 PF12404 Peptidase FIV04_RS02890 PF00334 Nucleoside diphosphate kinase FIV04_RS02895 PF04055 Radical SAM superfamily FIV04_RS02900 PF13464 Domain of unknown function (DUF4115) FIV04_RS02905 PF04551 GcpE protein FIV04_RS02910 PF13393 Histidyl-tRNA synthetase FIV04_RS02910 PF03129 Anticodon binding domain FIV04_RS02915 PF09976 Tetratricopeptide repeat-like domain FIV04_RS02920 PF13360 PQQ-like domain FIV04_RS02925 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FIV04_RS02925 PF01926 50S ribosome-binding GTPase FIV04_RS02935 PF08448 PAS fold FIV04_RS02935 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS02950 PF02653 Branched-chain amino acid transport system / permease component FIV04_RS02960 PF12399 Branched-chain amino acid ATP-binding cassette transporter FIV04_RS02960 PF00005 ABC transporter FIV04_RS02965 PF00005 ABC transporter FIV04_RS02970 PF01774 UreD urease accessory protein FIV04_RS02975 PF00547 Urease, gamma subunit FIV04_RS02980 PF00699 Urease beta subunit FIV04_RS02985 PF00449 Urease alpha-subunit, N-terminal domain FIV04_RS02985 PF01979 Amidohydrolase family FIV04_RS02990 PF05194 UreE urease accessory protein, C-terminal domain FIV04_RS02990 PF02814 UreE urease accessory protein, N-terminal domain FIV04_RS03000 PF01730 UreF FIV04_RS03005 PF02492 CobW/HypB/UreG, nucleotide-binding domain FIV04_RS03010 PF02601 Exonuclease VII, large subunit FIV04_RS03010 PF13742 OB-fold nucleic acid binding domain FIV04_RS03015 PF00478 IMP dehydrogenase / GMP reductase domain FIV04_RS03015 PF00571 CBS domain FIV04_RS03020 PF00117 Glutamine amidotransferase class-I FIV04_RS03020 PF02540 NAD synthase FIV04_RS03020 PF00958 GMP synthase C terminal domain FIV04_RS03025 PF00704 Glycosyl hydrolases family 18 FIV04_RS03025 PF06483 Chitinase C FIV04_RS03030 PF01184 GPR1/FUN34/yaaH family FIV04_RS03035 PF01235 Sodium:alanine symporter family FIV04_RS03040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FIV04_RS03040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FIV04_RS03040 PF02378 Phosphotransferase system, EIIC FIV04_RS03045 PF05068 Mannitol repressor FIV04_RS03050 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FIV04_RS03050 PF10996 Beta-Casp domain FIV04_RS03050 PF00753 Metallo-beta-lactamase superfamily FIV04_RS03055 PF01553 Acyltransferase FIV04_RS03150 PF00291 Pyridoxal-phosphate dependent enzyme FIV04_RS03160 PF08534 Redoxin FIV04_RS03165 PF08534 Redoxin FIV04_RS03170 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS03170 PF00072 Response regulator receiver domain FIV04_RS03175 PF16527 Two-component sensor protein CpxA, periplasmic domain FIV04_RS03175 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS03175 PF00672 HAMP domain FIV04_RS03190 PF03150 Di-haem cytochrome c peroxidase FIV04_RS03190 PF00034 Cytochrome c FIV04_RS03205 PF18030 RimK PreATP-grasp domain FIV04_RS03205 PF08443 RimK-like ATP-grasp domain FIV04_RS03215 PF01668 SmpB protein FIV04_RS03220 PF03364 Polyketide cyclase / dehydrase and lipid transport FIV04_RS03225 PF03658 RnfH family Ubiquitin FIV04_RS03230 PF04355 SmpA / OmlA family FIV04_RS03235 PF02463 RecF/RecN/SMC N terminal domain FIV04_RS03240 PF01541 GIY-YIG catalytic domain FIV04_RS03245 PF01513 ATP-NAD kinase FIV04_RS03250 PF01025 GrpE FIV04_RS03255 PF00375 Sodium:dicarboxylate symporter family FIV04_RS03265 PF00012 Hsp70 protein FIV04_RS03270 PF00684 DnaJ central domain FIV04_RS03270 PF01556 DnaJ C terminal domain FIV04_RS03270 PF00226 DnaJ domain FIV04_RS03275 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor FIV04_RS03275 PF07963 Prokaryotic N-terminal methylation motif FIV04_RS03300 PF03806 AbgT putative transporter family FIV04_RS03305 PF03471 Transporter associated domain FIV04_RS03305 PF00571 CBS domain FIV04_RS03305 PF01595 Cyclin M transmembrane N-terminal domain FIV04_RS03310 PF14437 MafB19-like deaminase FIV04_RS03315 PF02566 OsmC-like protein FIV04_RS03320 PF01047 MarR family FIV04_RS03325 PF01464 Transglycosylase SLT domain FIV04_RS03325 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV04_RS03330 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FIV04_RS03330 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FIV04_RS03330 PF02769 AIR synthase related protein, C-terminal domain FIV04_RS03340 PF14602 Hexapeptide repeat of succinyl-transferase FIV04_RS03340 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle FIV04_RS03345 PF01914 MarC family integral membrane protein FIV04_RS03360 PF07130 YebG protein FIV04_RS03365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS03365 PF03466 LysR substrate binding domain FIV04_RS03375 PF17946 RecC C-terminal domain FIV04_RS03380 PF00580 UvrD/REP helicase N-terminal domain FIV04_RS03380 PF12705 PD-(D/E)XK nuclease superfamily FIV04_RS03380 PF13361 UvrD-like helicase C-terminal domain FIV04_RS03385 PF13538 UvrD-like helicase C-terminal domain FIV04_RS03395 PF00583 Acetyltransferase (GNAT) family FIV04_RS03395 PF00696 Amino acid kinase family FIV04_RS03405 PF06725 3D domain FIV04_RS03405 PF03562 MltA specific insert domain FIV04_RS03410 PF00899 ThiF family FIV04_RS03415 PF02657 Fe-S metabolism associated domain FIV04_RS03420 PF00266 Aminotransferase class-V FIV04_RS03425 PF08546 Ketopantoate reductase PanE/ApbA C terminal FIV04_RS03425 PF02558 Ketopantoate reductase PanE/ApbA FIV04_RS03435 PF07690 Major Facilitator Superfamily FIV04_RS03440 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FIV04_RS03450 PF05175 Methyltransferase small domain FIV04_RS03455 PF01722 BolA-like protein FIV04_RS03460 PF11973 NQRA C-terminal domain FIV04_RS03460 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) FIV04_RS03465 PF03116 NQR2, RnfD, RnfE family FIV04_RS03470 PF04205 FMN-binding domain FIV04_RS03475 PF02508 Rnf-Nqr subunit, membrane protein FIV04_RS03480 PF02508 Rnf-Nqr subunit, membrane protein FIV04_RS03485 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV04_RS03485 PF00175 Oxidoreductase NAD-binding domain FIV04_RS03485 PF00970 Oxidoreductase FAD-binding domain FIV04_RS03490 PF02424 ApbE family FIV04_RS03495 PF04400 (Na+)-NQR maturation NqrM FIV04_RS03500 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS03500 PF00072 Response regulator receiver domain FIV04_RS03505 PF00817 impB/mucB/samB family FIV04_RS03505 PF11799 impB/mucB/samB family C-terminal domain FIV04_RS03505 PF11798 IMS family HHH motif FIV04_RS03510 PF09382 RQC domain FIV04_RS03510 PF16124 RecQ zinc-binding FIV04_RS03510 PF00271 Helicase conserved C-terminal domain FIV04_RS03510 PF00270 DEAD/DEAH box helicase FIV04_RS03510 PF00570 HRDC domain FIV04_RS03515 PF01272 Transcription elongation factor, GreA/GreB, C-term FIV04_RS03515 PF03449 Transcription elongation factor, N-terminal FIV04_RS03525 PF00209 Sodium:neurotransmitter symporter family FIV04_RS03530 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FIV04_RS03530 PF04055 Radical SAM superfamily FIV04_RS03535 PF03099 Biotin/lipoate A/B protein ligase family FIV04_RS03540 PF04359 Protein of unknown function (DUF493) FIV04_RS03545 PF07943 Penicillin-binding protein 5, C-terminal domain FIV04_RS03545 PF00768 D-alanyl-D-alanine carboxypeptidase FIV04_RS03550 PF03330 Lytic transglycolase FIV04_RS03550 PF05036 Sporulation related domain FIV04_RS03555 PF01098 Cell cycle protein FIV04_RS03560 PF03717 Penicillin-binding Protein dimerisation domain FIV04_RS03560 PF00905 Penicillin binding protein transpeptidase domain FIV04_RS03565 PF02590 Predicted SPOUT methyltransferase FIV04_RS03575 PF06144 DNA polymerase III, delta subunit FIV04_RS03575 PF14840 Processivity clamp loader gamma complex DNA pol III C-term FIV04_RS03580 PF04390 Lipopolysaccharide-assembly FIV04_RS03585 PF13603 Leucyl-tRNA synthetase, Domain 2 FIV04_RS03585 PF00133 tRNA synthetases class I (I, L, M and V) FIV04_RS03585 PF08264 Anticodon-binding domain of tRNA FIV04_RS03590 PF07295 Zinc-ribbon containing domain FIV04_RS03595 PF00795 Carbon-nitrogen hydrolase FIV04_RS03600 PF03471 Transporter associated domain FIV04_RS03600 PF00571 CBS domain FIV04_RS03605 PF02130 Uncharacterized protein family UPF0054 FIV04_RS03610 PF02562 PhoH-like protein FIV04_RS03615 PF04055 Radical SAM superfamily FIV04_RS03615 PF01938 TRAM domain FIV04_RS03615 PF00919 Uncharacterized protein family UPF0004 FIV04_RS03620 PF01494 FAD binding domain FIV04_RS03625 PF10282 Lactonase, 7-bladed beta-propeller FIV04_RS03735 PF06071 Protein of unknown function (DUF933) FIV04_RS03735 PF01926 50S ribosome-binding GTPase FIV04_RS03740 PF01195 Peptidyl-tRNA hydrolase FIV04_RS03745 PF14572 Phosphoribosyl synthetase-associated domain FIV04_RS03745 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FIV04_RS03750 PF08544 GHMP kinases C terminal FIV04_RS03750 PF00288 GHMP kinases N terminal domain FIV04_RS03755 PF03550 Outer membrane lipoprotein LolB FIV04_RS03760 PF01488 Shikimate / quinate 5-dehydrogenase FIV04_RS03760 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FIV04_RS03760 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FIV04_RS03765 PF00472 RF-1 domain FIV04_RS03765 PF03462 PCRF domain FIV04_RS03770 PF13847 Methyltransferase domain FIV04_RS03770 PF17827 PrmC N-terminal domain FIV04_RS03775 PF04247 Invasion gene expression up-regulator, SirB FIV04_RS03780 PF13369 Transglutaminase-like superfamily FIV04_RS03785 PF00793 DAHP synthetase I family FIV04_RS03790 PF02872 5'-nucleotidase, C-terminal domain FIV04_RS03790 PF00149 Calcineurin-like phosphoesterase FIV04_RS03795 PF04073 Aminoacyl-tRNA editing domain FIV04_RS03800 PF00849 RNA pseudouridylate synthase FIV04_RS03800 PF01479 S4 domain FIV04_RS03805 PF01713 Smr domain FIV04_RS03830 PF03173 Putative carbohydrate binding domain FIV04_RS03830 PF00728 Glycosyl hydrolase family 20, catalytic domain FIV04_RS03830 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain FIV04_RS03830 PF02838 Glycosyl hydrolase family 20, domain 2 FIV04_RS03845 PF00403 Heavy-metal-associated domain FIV04_RS03850 PF00749 tRNA synthetases class I (E and Q), catalytic domain FIV04_RS03860 PF02801 Beta-ketoacyl synthase, C-terminal domain FIV04_RS03860 PF00109 Beta-ketoacyl synthase, N-terminal domain FIV04_RS03875 PF00109 Beta-ketoacyl synthase, N-terminal domain FIV04_RS03875 PF02801 Beta-ketoacyl synthase, C-terminal domain FIV04_RS03900 PF00221 Aromatic amino acid lyase FIV04_RS03905 PF00535 Glycosyl transferase family 2 FIV04_RS03915 PF13193 AMP-binding enzyme C-terminal domain FIV04_RS03915 PF00501 AMP-binding enzyme FIV04_RS03925 PF00550 Phosphopantetheine attachment site FIV04_RS03930 PF00550 Phosphopantetheine attachment site FIV04_RS03955 PF04820 Tryptophan halogenase FIV04_RS03990 PF13144 Chaperone for flagella basal body P-ring formation FIV04_RS03995 PF00072 Response regulator receiver domain FIV04_RS03995 PF01584 CheW-like domain FIV04_RS04000 PF01739 CheR methyltransferase, SAM binding domain FIV04_RS04000 PF03705 CheR methyltransferase, all-alpha domain FIV04_RS04005 PF00460 Flagella basal body rod protein FIV04_RS04010 PF00460 Flagella basal body rod protein FIV04_RS04010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV04_RS04015 PF13861 FlgD Tudor-like domain FIV04_RS04015 PF13860 FlgD Ig-like domain FIV04_RS04015 PF03963 Flagellar hook capping protein - N-terminal region FIV04_RS04020 PF00460 Flagella basal body rod protein FIV04_RS04020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV04_RS04020 PF07559 Flagellar basal body protein FlaE FIV04_RS04025 PF00460 Flagella basal body rod protein FIV04_RS04025 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV04_RS04030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV04_RS04030 PF00460 Flagella basal body rod protein FIV04_RS04035 PF02107 Flagellar L-ring protein FIV04_RS04040 PF02119 Flagellar P-ring protein FIV04_RS04045 PF10135 Rod binding protein FIV04_RS04045 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FIV04_RS04050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV04_RS04050 PF07196 Flagellin hook IN motif FIV04_RS04060 PF00700 Bacterial flagellin C-terminal helical region FIV04_RS04060 PF00669 Bacterial flagellin N-terminal helical region FIV04_RS04060 PF07196 Flagellin hook IN motif FIV04_RS04070 PF07196 Flagellin hook IN motif FIV04_RS04070 PF00700 Bacterial flagellin C-terminal helical region FIV04_RS04070 PF00669 Bacterial flagellin N-terminal helical region FIV04_RS04075 PF00669 Bacterial flagellin N-terminal helical region FIV04_RS04075 PF00700 Bacterial flagellin C-terminal helical region FIV04_RS04075 PF07196 Flagellin hook IN motif FIV04_RS04080 PF03646 FlaG protein FIV04_RS04085 PF02465 Flagellar hook-associated protein 2 N-terminus FIV04_RS04085 PF07196 Flagellin hook IN motif FIV04_RS04085 PF07195 Flagellar hook-associated protein 2 C-terminus FIV04_RS04095 PF02561 Flagellar protein FliS FIV04_RS04100 PF02954 Bacterial regulatory protein, Fis family FIV04_RS04100 PF00158 Sigma-54 interaction domain FIV04_RS04100 PF06490 Flagellar regulatory protein FleQ FIV04_RS04105 PF13188 PAS domain FIV04_RS04105 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS04105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS04110 PF02954 Bacterial regulatory protein, Fis family FIV04_RS04110 PF00158 Sigma-54 interaction domain FIV04_RS04110 PF00072 Response regulator receiver domain FIV04_RS04115 PF02049 Flagellar hook-basal body complex protein FliE FIV04_RS04120 PF01514 Secretory protein of YscJ/FliF family FIV04_RS04120 PF08345 Flagellar M-ring protein C-terminal FIV04_RS04125 PF01706 FliG C-terminal domain FIV04_RS04125 PF14841 FliG middle domain FIV04_RS04125 PF14842 FliG N-terminal domain FIV04_RS04135 PF18269 T3SS EscN ATPase C-terminal domain FIV04_RS04135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV04_RS04155 PF02154 Flagellar motor switch protein FliM FIV04_RS04155 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FIV04_RS04160 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FIV04_RS04165 PF04347 Flagellar biosynthesis protein, FliO FIV04_RS04170 PF00813 FliP family FIV04_RS04175 PF01313 Bacterial export proteins, family 3 FIV04_RS04180 PF01311 Bacterial export proteins, family 1 FIV04_RS04185 PF01312 FlhB HrpN YscU SpaS Family FIV04_RS04190 PF00771 FHIPEP family FIV04_RS04195 PF00448 SRP54-type protein, GTPase domain FIV04_RS04200 PF10609 NUBPL iron-transfer P-loop NTPase FIV04_RS04205 PF04542 Sigma-70 region 2 FIV04_RS04205 PF04545 Sigma-70, region 4 FIV04_RS04205 PF04539 Sigma-70 region 3 FIV04_RS04210 PF00072 Response regulator receiver domain FIV04_RS04215 PF04344 Chemotaxis phosphatase, CheZ FIV04_RS04220 PF00072 Response regulator receiver domain FIV04_RS04220 PF01584 CheW-like domain FIV04_RS04220 PF02895 Signal transducing histidine kinase, homodimeric domain FIV04_RS04220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS04220 PF01627 Hpt domain FIV04_RS04225 PF00072 Response regulator receiver domain FIV04_RS04225 PF01339 CheB methylesterase FIV04_RS04230 PF13614 AAA domain FIV04_RS04240 PF01584 CheW-like domain FIV04_RS04250 PF00005 ABC transporter FIV04_RS04255 PF03379 CcmB protein FIV04_RS04260 PF01578 Cytochrome C assembly protein FIV04_RS04265 PF04995 Heme exporter protein D (CcmD) FIV04_RS04270 PF03100 CcmE FIV04_RS04275 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FIV04_RS04275 PF01578 Cytochrome C assembly protein FIV04_RS04280 PF08534 Redoxin FIV04_RS04285 PF03918 Cytochrome C biogenesis protein FIV04_RS04290 PF03918 Cytochrome C biogenesis protein FIV04_RS04295 PF04333 MlaA lipoprotein FIV04_RS04300 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FIV04_RS04305 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FIV04_RS04315 PF08281 Sigma-70, region 4 FIV04_RS04315 PF04542 Sigma-70 region 2 FIV04_RS04320 PF00108 Thiolase, N-terminal domain FIV04_RS04320 PF02803 Thiolase, C-terminal domain FIV04_RS04325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FIV04_RS04325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FIV04_RS04325 PF00378 Enoyl-CoA hydratase/isomerase FIV04_RS04330 PF05193 Peptidase M16 inactive domain FIV04_RS04330 PF00675 Insulinase (Peptidase family M16) FIV04_RS04335 PF00300 Histidine phosphatase superfamily (branch 1) FIV04_RS04340 PF01713 Smr domain FIV04_RS04345 PF05175 Methyltransferase small domain FIV04_RS04350 PF01810 LysE type translocator FIV04_RS04355 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FIV04_RS04360 PF00072 Response regulator receiver domain FIV04_RS04360 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS04365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS04365 PF00672 HAMP domain FIV04_RS04365 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS04370 PF01547 Bacterial extracellular solute-binding protein FIV04_RS04375 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS04380 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS04385 PF17912 MalK OB fold domain FIV04_RS04385 PF00005 ABC transporter FIV04_RS04385 PF03459 TOBE domain FIV04_RS04390 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV04_RS04395 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FIV04_RS04400 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV04_RS04410 PF00158 Sigma-54 interaction domain FIV04_RS04410 PF00072 Response regulator receiver domain FIV04_RS04410 PF02954 Bacterial regulatory protein, Fis family FIV04_RS04415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS04415 PF02743 Cache domain FIV04_RS04415 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS04425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIV04_RS04425 PF05698 Bacterial trigger factor protein (TF) C-terminus FIV04_RS04425 PF05697 Bacterial trigger factor protein (TF) FIV04_RS04430 PF00574 Clp protease FIV04_RS04435 PF06689 ClpX C4-type zinc finger FIV04_RS04435 PF10431 C-terminal, D2-small domain, of ClpB protein FIV04_RS04435 PF07724 AAA domain (Cdc48 subfamily) FIV04_RS04440 PF02190 ATP-dependent protease La (LON) substrate-binding domain FIV04_RS04440 PF00004 ATPase family associated with various cellular activities (AAA) FIV04_RS04440 PF05362 Lon protease (S16) C-terminal proteolytic domain FIV04_RS04445 PF00216 Bacterial DNA-binding protein FIV04_RS04450 PF13145 PPIC-type PPIASE domain FIV04_RS04470 PF01966 HD domain FIV04_RS04470 PF13286 Phosphohydrolase-associated domain FIV04_RS04480 PF00155 Aminotransferase class I and II FIV04_RS04485 PF00425 chorismate binding enzyme FIV04_RS04490 PF16582 Middle domain of thiamine pyrophosphate FIV04_RS04490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIV04_RS04490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIV04_RS04495 PF12697 Alpha/beta hydrolase family FIV04_RS04500 PF00378 Enoyl-CoA hydratase/isomerase FIV04_RS04505 PF13378 Enolase C-terminal domain-like FIV04_RS04510 PF00501 AMP-binding enzyme FIV04_RS04510 PF13193 AMP-binding enzyme C-terminal domain FIV04_RS04515 PF02378 Phosphotransferase system, EIIC FIV04_RS04515 PF00367 phosphotransferase system, EIIB FIV04_RS04515 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FIV04_RS04520 PF03466 LysR substrate binding domain FIV04_RS04520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS04525 PF03601 Conserved hypothetical protein 698 FIV04_RS04530 PF07690 Major Facilitator Superfamily FIV04_RS04585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV04_RS04590 PF00873 AcrB/AcrD/AcrF family FIV04_RS04605 PF00291 Pyridoxal-phosphate dependent enzyme FIV04_RS04610 PF01037 Lrp/AsnC ligand binding domain FIV04_RS04610 PF13404 AsnC-type helix-turn-helix domain FIV04_RS04625 PF09619 Type III secretion system lipoprotein chaperone (YscW) FIV04_RS04630 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FIV04_RS04645 PF07702 UTRA domain FIV04_RS04645 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS04650 PF00367 phosphotransferase system, EIIB FIV04_RS04650 PF02378 Phosphotransferase system, EIIC FIV04_RS04655 PF00251 Glycosyl hydrolases family 32 N-terminal domain FIV04_RS04655 PF08244 Glycosyl hydrolases family 32 C terminal FIV04_RS04665 PF00294 pfkB family carbohydrate kinase FIV04_RS04670 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV04_RS04680 PF00107 Zinc-binding dehydrogenase FIV04_RS04680 PF08240 Alcohol dehydrogenase GroES-like domain FIV04_RS04685 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS04685 PF00360 Phytochrome region FIV04_RS04685 PF01590 GAF domain FIV04_RS04685 PF00563 EAL domain FIV04_RS04715 PF08274 PhnA Zinc-Ribbon FIV04_RS04715 PF03831 PhnA domain FIV04_RS04725 PF06291 Bor protein FIV04_RS04730 PF00072 Response regulator receiver domain FIV04_RS04730 PF09308 LuxQ, periplasmic FIV04_RS04730 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS04730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS04735 PF00072 Response regulator receiver domain FIV04_RS04735 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS04765 PF00892 EamA-like transporter family FIV04_RS04795 PF00884 Sulfatase FIV04_RS04800 PF00356 Bacterial regulatory proteins, lacI family FIV04_RS04815 PF07690 Major Facilitator Superfamily FIV04_RS04820 PF00474 Sodium:solute symporter family FIV04_RS04825 PF03313 Serine dehydratase alpha chain FIV04_RS04825 PF03315 Serine dehydratase beta chain FIV04_RS04830 PF01037 Lrp/AsnC ligand binding domain FIV04_RS04830 PF13404 AsnC-type helix-turn-helix domain FIV04_RS04835 PF01810 LysE type translocator FIV04_RS04840 PF05036 Sporulation related domain FIV04_RS04840 PF03330 Lytic transglycolase FIV04_RS04850 PF01979 Amidohydrolase family FIV04_RS04850 PF13382 Adenine deaminase C-terminal domain FIV04_RS04860 PF01979 Amidohydrolase family FIV04_RS04865 PF08212 Lipocalin-like domain FIV04_RS04875 PF08803 Putative mono-oxygenase ydhR FIV04_RS04895 PF00873 AcrB/AcrD/AcrF family FIV04_RS04915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS04915 PF03466 LysR substrate binding domain FIV04_RS04920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV04_RS04925 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FIV04_RS04950 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FIV04_RS04960 PF00591 Glycosyl transferase family, a/b domain FIV04_RS04960 PF02885 Glycosyl transferase family, helical bundle domain FIV04_RS04975 PF00571 CBS domain FIV04_RS04975 PF01743 Poly A polymerase head domain FIV04_RS04980 PF01554 MatE FIV04_RS04985 PF00403 Heavy-metal-associated domain FIV04_RS04990 PF01048 Phosphorylase superfamily FIV04_RS05000 PF00672 HAMP domain FIV04_RS05000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS05005 PF01230 HIT domain FIV04_RS05020 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FIV04_RS05020 PF13036 Peptidoglycan-synthase activator LpoB FIV04_RS05030 PF05728 Uncharacterised protein family (UPF0227) FIV04_RS05035 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS05040 PF00106 short chain dehydrogenase FIV04_RS05045 PF08496 Peptidase family S49 N-terminal FIV04_RS05045 PF01343 Peptidase family S49 FIV04_RS05050 PF04293 SpoVR like protein FIV04_RS05055 PF04285 Protein of unknown function (DUF444) FIV04_RS05060 PF08298 PrkA AAA domain FIV04_RS05060 PF06798 PrkA serine protein kinase C-terminal domain FIV04_RS05070 PF03887 YfbU domain FIV04_RS05075 PF04055 Radical SAM superfamily FIV04_RS05085 PF02901 Pyruvate formate lyase-like FIV04_RS05085 PF01228 Glycine radical FIV04_RS05100 PF00005 ABC transporter FIV04_RS05105 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV04_RS05110 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS05115 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS05130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV04_RS05130 PF00529 HlyD membrane-fusion protein of T1SS FIV04_RS05135 PF00005 ABC transporter FIV04_RS05135 PF00664 ABC transporter transmembrane region FIV04_RS05140 PF03372 Endonuclease/Exonuclease/phosphatase family FIV04_RS05145 PF00326 Prolyl oligopeptidase family FIV04_RS05145 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FIV04_RS05150 PF07690 Major Facilitator Superfamily FIV04_RS05155 PF00672 HAMP domain FIV04_RS05155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS05160 PF08007 Cupin superfamily protein FIV04_RS05165 PF10689 Protein of unknown function (DUF2496) FIV04_RS05175 PF01925 Sulfite exporter TauE/SafE FIV04_RS05180 PF13307 Helicase C-terminal domain FIV04_RS05180 PF06733 DEAD_2 FIV04_RS05190 PF00849 RNA pseudouridylate synthase FIV04_RS05195 PF03971 Monomeric isocitrate dehydrogenase FIV04_RS05200 PF00313 'Cold-shock' DNA-binding domain FIV04_RS05205 PF02617 ATP-dependent Clp protease adaptor protein ClpS FIV04_RS05210 PF07724 AAA domain (Cdc48 subfamily) FIV04_RS05210 PF10431 C-terminal, D2-small domain, of ClpB protein FIV04_RS05210 PF02861 Clp amino terminal domain, pathogenicity island component FIV04_RS05210 PF17871 AAA lid domain FIV04_RS05210 PF00004 ATPase family associated with various cellular activities (AAA) FIV04_RS05215 PF01176 Translation initiation factor 1A / IF-1 FIV04_RS05220 PF04377 Arginine-tRNA-protein transferase, C terminus FIV04_RS05220 PF04376 Arginine-tRNA-protein transferase, N terminus FIV04_RS05225 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FIV04_RS05235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FIV04_RS05240 PF10692 Protein of unknown function (DUF2498) FIV04_RS05245 PF08272 Topoisomerase I zinc-ribbon-like FIV04_RS05245 PF01131 DNA topoisomerase FIV04_RS05245 PF01751 Toprim domain FIV04_RS05245 PF01396 Topoisomerase DNA binding C4 zinc finger FIV04_RS05250 PF00483 Nucleotidyl transferase FIV04_RS05255 PF08323 Starch synthase catalytic domain FIV04_RS05255 PF00534 Glycosyl transferases group 1 FIV04_RS05275 PF04994 TfoX C-terminal domain FIV04_RS05275 PF04993 TfoX N-terminal domain FIV04_RS05280 PF00356 Bacterial regulatory proteins, lacI family FIV04_RS05285 PF02613 Nitrate reductase delta subunit FIV04_RS05290 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS05290 PF00072 Response regulator receiver domain FIV04_RS05295 PF02698 DUF218 domain FIV04_RS05300 PF13847 Methyltransferase domain FIV04_RS05305 PF03882 MukF winged-helix domain FIV04_RS05305 PF17192 MukF middle domain FIV04_RS05305 PF17193 MukF C-terminal domain FIV04_RS05310 PF04288 MukE-like family FIV04_RS05315 PF16330 MukB hinge domain FIV04_RS05315 PF04310 MukB N-terminal FIV04_RS05320 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FIV04_RS05320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FIV04_RS05320 PF00384 Molybdopterin oxidoreductase FIV04_RS05320 PF12838 4Fe-4S dicluster domain FIV04_RS05320 PF01568 Molydopterin dinucleotide binding domain FIV04_RS05335 PF18030 RimK PreATP-grasp domain FIV04_RS05335 PF08443 RimK-like ATP-grasp domain FIV04_RS05340 PF08003 Protein of unknown function (DUF1698) FIV04_RS05345 PF13649 Methyltransferase domain FIV04_RS05350 PF01904 Protein of unknown function DUF72 FIV04_RS05355 PF01336 OB-fold nucleic acid binding domain FIV04_RS05355 PF00152 tRNA synthetases class II (D, K and N) FIV04_RS05355 PF02938 GAD domain FIV04_RS05360 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS05365 PF02075 Crossover junction endodeoxyribonuclease RuvC FIV04_RS05370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS05370 PF00672 HAMP domain FIV04_RS05370 PF17200 Single Cache domain 2 FIV04_RS05375 PF01330 RuvA N terminal domain FIV04_RS05375 PF07499 RuvA, C-terminal domain FIV04_RS05380 PF17864 RuvB AAA lid domain FIV04_RS05380 PF05491 RuvB C-terminal winged helix domain FIV04_RS05380 PF05496 Holliday junction DNA helicase RuvB P-loop domain FIV04_RS05385 PF01654 Cytochrome bd terminal oxidase subunit I FIV04_RS05390 PF02322 Cytochrome bd terminal oxidase subunit II FIV04_RS05395 PF08173 Membrane bound YbgT-like protein FIV04_RS05405 PF03061 Thioesterase superfamily FIV04_RS05410 PF01618 MotA/TolQ/ExbB proton channel family FIV04_RS05415 PF02472 Biopolymer transport protein ExbD/TolR FIV04_RS05425 PF04052 TolB amino-terminal domain FIV04_RS05425 PF07676 WD40-like Beta Propeller Repeat FIV04_RS05430 PF00691 OmpA family FIV04_RS05435 PF16331 TolA binding protein trimerisation FIV04_RS05435 PF13174 Tetratricopeptide repeat FIV04_RS05440 PF02445 Quinolinate synthetase A protein FIV04_RS05455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS05455 PF00072 Response regulator receiver domain FIV04_RS05455 PF09308 LuxQ, periplasmic FIV04_RS05455 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS05460 PF06610 L-alanine exporter FIV04_RS05470 PF00356 Bacterial regulatory proteins, lacI family FIV04_RS05480 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS05485 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS05490 PF03636 Glycosyl hydrolase family 65, N-terminal domain FIV04_RS05490 PF03632 Glycosyl hydrolase family 65 central catalytic domain FIV04_RS05490 PF03633 Glycosyl hydrolase family 65, C-terminal domain FIV04_RS05495 PF13419 Haloacid dehalogenase-like hydrolase FIV04_RS05500 PF17912 MalK OB fold domain FIV04_RS05500 PF00005 ABC transporter FIV04_RS05510 PF08244 Glycosyl hydrolases family 32 C terminal FIV04_RS05510 PF00251 Glycosyl hydrolases family 32 N-terminal domain FIV04_RS05515 PF00128 Alpha amylase, catalytic domain FIV04_RS05530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS05530 PF03466 LysR substrate binding domain FIV04_RS05535 PF00455 DeoR C terminal sensor domain FIV04_RS05535 PF08220 DeoR-like helix-turn-helix domain FIV04_RS05540 PF03009 Glycerophosphoryl diester phosphodiesterase family FIV04_RS05545 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV04_RS05555 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV04_RS05580 PF01464 Transglycosylase SLT domain FIV04_RS05580 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FIV04_RS05595 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS05600 PF00873 AcrB/AcrD/AcrF family FIV04_RS05615 PF01266 FAD dependent oxidoreductase FIV04_RS05635 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS05635 PF00072 Response regulator receiver domain FIV04_RS05640 PF00535 Glycosyl transferase family 2 FIV04_RS05645 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FIV04_RS05655 PF11842 Domain of unknown function (DUF3362) FIV04_RS05655 PF04055 Radical SAM superfamily FIV04_RS05655 PF08497 Radical SAM N-terminal FIV04_RS05670 PF03466 LysR substrate binding domain FIV04_RS05670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS05675 PF01717 Cobalamin-independent synthase, Catalytic domain FIV04_RS05675 PF08267 Cobalamin-independent synthase, N-terminal domain FIV04_RS05685 PF03795 YCII-related domain FIV04_RS05690 PF03061 Thioesterase superfamily FIV04_RS05695 PF04279 Intracellular septation protein A FIV04_RS05705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS05705 PF03466 LysR substrate binding domain FIV04_RS05715 PF00155 Aminotransferase class I and II FIV04_RS05720 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV04_RS05725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS05725 PF00672 HAMP domain FIV04_RS05745 PF00375 Sodium:dicarboxylate symporter family FIV04_RS05755 PF01145 SPFH domain / Band 7 family FIV04_RS05755 PF16200 C-terminal region of band_7 FIV04_RS05760 PF00290 Tryptophan synthase alpha chain FIV04_RS05765 PF00291 Pyridoxal-phosphate dependent enzyme FIV04_RS05770 PF00218 Indole-3-glycerol phosphate synthase FIV04_RS05770 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FIV04_RS05775 PF02885 Glycosyl transferase family, helical bundle domain FIV04_RS05775 PF00591 Glycosyl transferase family, a/b domain FIV04_RS05780 PF00117 Glutamine amidotransferase class-I FIV04_RS05785 PF04715 Anthranilate synthase component I, N terminal region FIV04_RS05785 PF00425 chorismate binding enzyme FIV04_RS05790 PF08056 Tryptophan operon leader peptide FIV04_RS05800 PF01300 Telomere recombination FIV04_RS05805 PF01479 S4 domain FIV04_RS05805 PF00849 RNA pseudouridylate synthase FIV04_RS05815 PF04269 Protein of unknown function, DUF440 FIV04_RS05820 PF01132 Elongation factor P (EF-P) OB domain FIV04_RS05820 PF08207 Elongation factor P (EF-P) KOW-like domain FIV04_RS05820 PF09285 Elongation factor P, C-terminal FIV04_RS05830 PF00136 DNA polymerase family B FIV04_RS05830 PF03104 DNA polymerase family B, exonuclease domain FIV04_RS05835 PF00072 Response regulator receiver domain FIV04_RS05835 PF00196 Bacterial regulatory proteins, luxR family FIV04_RS05840 PF08459 UvrC Helix-hairpin-helix N-terminal FIV04_RS05840 PF02151 UvrB/uvrC motif FIV04_RS05840 PF01541 GIY-YIG catalytic domain FIV04_RS05845 PF01066 CDP-alcohol phosphatidyltransferase FIV04_RS05875 PF00202 Aminotransferase class-III FIV04_RS05880 PF16653 Saccharopine dehydrogenase C-terminal domain FIV04_RS05880 PF03435 Saccharopine dehydrogenase NADP binding domain FIV04_RS05885 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FIV04_RS05910 PF00994 Probable molybdopterin binding domain FIV04_RS05915 PF00175 Oxidoreductase NAD-binding domain FIV04_RS05915 PF00970 Oxidoreductase FAD-binding domain FIV04_RS05915 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV04_RS05920 PF00268 Ribonucleotide reductase, small chain FIV04_RS05925 PF03477 ATP cone domain FIV04_RS05925 PF02867 Ribonucleotide reductase, barrel domain FIV04_RS05925 PF00317 Ribonucleotide reductase, all-alpha domain FIV04_RS05940 PF03989 DNA gyrase C-terminal domain, beta-propeller FIV04_RS05940 PF00521 DNA gyrase/topoisomerase IV, subunit A FIV04_RS05950 PF00581 Rhodanese-like domain FIV04_RS05955 PF02335 Cytochrome c552 FIV04_RS05965 PF13247 4Fe-4S dicluster domain FIV04_RS05970 PF03916 Polysulphide reductase, NrfD FIV04_RS05975 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FIV04_RS05975 PF01578 Cytochrome C assembly protein FIV04_RS05980 PF08534 Redoxin FIV04_RS05985 PF03918 Cytochrome C biogenesis protein FIV04_RS05990 PF00925 GTP cyclohydrolase II FIV04_RS06015 PF01471 Putative peptidoglycan binding domain FIV04_RS06015 PF03734 L,D-transpeptidase catalytic domain FIV04_RS06020 PF05951 Bacterial protein of unknown function (DUF882) FIV04_RS06025 PF00753 Metallo-beta-lactamase superfamily FIV04_RS06040 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV04_RS06050 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV04_RS06055 PF17200 Single Cache domain 2 FIV04_RS06055 PF07730 Histidine kinase FIV04_RS06060 PF00196 Bacterial regulatory proteins, luxR family FIV04_RS06060 PF00072 Response regulator receiver domain FIV04_RS06065 PF02028 BCCT, betaine/carnitine/choline family transporter FIV04_RS06070 PF00672 HAMP domain FIV04_RS06070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS06080 PF00127 Copper binding proteins, plastocyanin/azurin family FIV04_RS06090 PF02657 Fe-S metabolism associated domain FIV04_RS06095 PF00266 Aminotransferase class-V FIV04_RS06100 PF01458 Uncharacterized protein family (UPF0051) FIV04_RS06105 PF00005 ABC transporter FIV04_RS06110 PF01458 Uncharacterized protein family (UPF0051) FIV04_RS06115 PF01521 Iron-sulphur cluster biosynthesis FIV04_RS06125 PF07972 NrdI Flavodoxin like FIV04_RS06130 PF02867 Ribonucleotide reductase, barrel domain FIV04_RS06130 PF08343 Ribonucleotide reductase N-terminal FIV04_RS06130 PF00317 Ribonucleotide reductase, all-alpha domain FIV04_RS06135 PF00268 Ribonucleotide reductase, small chain FIV04_RS06140 PF08534 Redoxin FIV04_RS06145 PF00664 ABC transporter transmembrane region FIV04_RS06145 PF00005 ABC transporter FIV04_RS06150 PF00005 ABC transporter FIV04_RS06150 PF00664 ABC transporter transmembrane region FIV04_RS06155 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS06170 PF00266 Aminotransferase class-V FIV04_RS06200 PF00072 Response regulator receiver domain FIV04_RS06200 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS06205 PF00939 Sodium:sulfate symporter transmembrane region FIV04_RS06210 PF02698 DUF218 domain FIV04_RS06215 PF00390 Malic enzyme, N-terminal domain FIV04_RS06215 PF03949 Malic enzyme, NAD binding domain FIV04_RS06220 PF00271 Helicase conserved C-terminal domain FIV04_RS06220 PF00270 DEAD/DEAH box helicase FIV04_RS06220 PF04408 Helicase associated domain (HA2) FIV04_RS06220 PF08482 ATP-dependent helicase C-terminal FIV04_RS06230 PF01259 SAICAR synthetase FIV04_RS06250 PF00691 OmpA family FIV04_RS06265 PF13183 4Fe-4S dicluster domain FIV04_RS06265 PF02913 FAD linked oxidases, C-terminal domain FIV04_RS06265 PF01565 FAD binding domain FIV04_RS06280 PF00221 Aromatic amino acid lyase FIV04_RS06285 PF17391 Urocanase N-terminal domain FIV04_RS06285 PF17392 Urocanase C-terminal domain FIV04_RS06285 PF01175 Urocanase Rossmann-like domain FIV04_RS06290 PF00491 Arginase family FIV04_RS06295 PF01979 Amidohydrolase family FIV04_RS06300 PF07702 UTRA domain FIV04_RS06300 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS06305 PF07070 SpoOM protein FIV04_RS06315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FIV04_RS06315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FIV04_RS06315 PF02824 TGS domain FIV04_RS06315 PF03129 Anticodon binding domain FIV04_RS06320 PF05198 Translation initiation factor IF-3, N-terminal domain FIV04_RS06320 PF00707 Translation initiation factor IF-3, C-terminal domain FIV04_RS06325 PF01632 Ribosomal protein L35 FIV04_RS06330 PF00453 Ribosomal protein L20 FIV04_RS06335 PF04266 ASCH domain FIV04_RS06350 PF01177 Asp/Glu/Hydantoin racemase FIV04_RS06355 PF17932 Tetracyclin repressor-like, C-terminal domain FIV04_RS06355 PF00440 Bacterial regulatory proteins, tetR family FIV04_RS06360 PF00171 Aldehyde dehydrogenase family FIV04_RS06365 PF17810 Arginine decarboxylase helical bundle domain FIV04_RS06365 PF17944 Arginine decarboxylase C-terminal helical extension FIV04_RS06365 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FIV04_RS06370 PF00491 Arginase family FIV04_RS06380 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV04_RS06385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FIV04_RS06385 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FIV04_RS06395 PF01554 MatE FIV04_RS06400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV04_RS06400 PF00005 ABC transporter FIV04_RS06405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV04_RS06405 PF00005 ABC transporter FIV04_RS06410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV04_RS06415 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS06425 PF06629 MltA-interacting protein MipA FIV04_RS06430 PF08448 PAS fold FIV04_RS06430 PF08447 PAS fold FIV04_RS06430 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS06430 PF00563 EAL domain FIV04_RS06435 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS06435 PF00072 Response regulator receiver domain FIV04_RS06440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS06440 PF08918 PhoQ Sensor FIV04_RS06445 PF01625 Peptide methionine sulfoxide reductase FIV04_RS06445 PF01641 SelR domain FIV04_RS06455 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FIV04_RS06460 PF01810 LysE type translocator FIV04_RS06465 PF01235 Sodium:alanine symporter family FIV04_RS06475 PF01235 Sodium:alanine symporter family FIV04_RS06490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV04_RS06505 PF00989 PAS fold FIV04_RS06505 PF17203 Single cache domain 3 FIV04_RS06505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS06505 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FIV04_RS06510 PF12431 Transcriptional regulator FIV04_RS06510 PF00072 Response regulator receiver domain FIV04_RS06515 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FIV04_RS06515 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FIV04_RS06520 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FIV04_RS06525 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FIV04_RS06525 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FIV04_RS06530 PF00072 Response regulator receiver domain FIV04_RS06535 PF09905 DNA-binding protein VF530 FIV04_RS06550 PF01970 Tripartite tricarboxylate transporter TctA family FIV04_RS06585 PF00285 Citrate synthase, C-terminal domain FIV04_RS06590 PF00330 Aconitase family (aconitate hydratase) FIV04_RS06590 PF00694 Aconitase C-terminal domain FIV04_RS06595 PF04303 PrpF protein FIV04_RS06600 PF13193 AMP-binding enzyme C-terminal domain FIV04_RS06600 PF16177 Acetyl-coenzyme A synthetase N-terminus FIV04_RS06600 PF00501 AMP-binding enzyme FIV04_RS06620 PF04055 Radical SAM superfamily FIV04_RS06625 PF06508 Queuosine biosynthesis protein QueC FIV04_RS06630 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS06630 PF17151 Periplasmic sensor domain FIV04_RS06640 PF05736 OprF membrane domain FIV04_RS06640 PF00691 OmpA family FIV04_RS06655 PF10672 S-adenosylmethionine-dependent methyltransferase FIV04_RS06655 PF17785 PUA-like domain FIV04_RS06660 PF00672 HAMP domain FIV04_RS06660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS06660 PF17200 Single Cache domain 2 FIV04_RS06665 PF00708 Acylphosphatase FIV04_RS06670 PF04358 DsrC like protein FIV04_RS06675 PF01027 Inhibitor of apoptosis-promoting Bax1 FIV04_RS06680 PF00005 ABC transporter FIV04_RS06685 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS06690 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS06695 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV04_RS06700 PF10414 Sirohaem synthase dimerisation region FIV04_RS06700 PF14824 Sirohaem biosynthesis protein central FIV04_RS06700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FIV04_RS06705 PF04461 Protein of unknown function (DUF520) FIV04_RS06710 PF00793 DAHP synthetase I family FIV04_RS06725 PF17783 CvfB-like winged helix domain FIV04_RS06725 PF13509 S1 domain FIV04_RS06730 PF01189 16S rRNA methyltransferase RsmB/F FIV04_RS06730 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FIV04_RS06730 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF FIV04_RS06735 PF02470 MlaD protein FIV04_RS06740 PF04403 Paraquat-inducible protein A FIV04_RS06745 PF00005 ABC transporter FIV04_RS06745 PF00664 ABC transporter transmembrane region FIV04_RS06750 PF13185 GAF domain FIV04_RS06755 PF04352 ProQ/FINO family FIV04_RS06755 PF17516 ProQ C-terminal domain FIV04_RS06760 PF11818 C-terminal domain of tail specific protease (DUF3340) FIV04_RS06760 PF03572 Peptidase family S41 FIV04_RS06760 PF00595 PDZ domain FIV04_RS06760 PF17804 Tail specific protease N-terminal domain FIV04_RS06770 PF01433 Peptidase family M1 domain FIV04_RS06770 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FIV04_RS06770 PF11940 Domain of unknown function (DUF3458) Ig-like fold FIV04_RS06780 PF05088 Bacterial NAD-glutamate dehydrogenase FIV04_RS06785 PF01180 Dihydroorotate dehydrogenase FIV04_RS06790 PF07126 Cell-division protein ZapC FIV04_RS06795 PF02926 THUMP domain FIV04_RS06795 PF10672 S-adenosylmethionine-dependent methyltransferase FIV04_RS06795 PF01170 Putative RNA methylase family UPF0020 FIV04_RS06805 PF12848 ABC transporter FIV04_RS06805 PF16326 ABC transporter C-terminal domain FIV04_RS06805 PF00005 ABC transporter FIV04_RS06815 PF04957 Ribosome modulation factor FIV04_RS06820 PF07977 FabA-like domain FIV04_RS06825 PF13654 AAA domain FIV04_RS06825 PF05362 Lon protease (S16) C-terminal proteolytic domain FIV04_RS06830 PF17414 MatP C-terminal ribbon-helix-helix domain FIV04_RS06830 PF06303 MatP N-terminal domain FIV04_RS07160 PF00072 Response regulator receiver domain FIV04_RS07160 PF09308 LuxQ, periplasmic FIV04_RS07160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS07160 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS07175 PF00115 Cytochrome C and Quinol oxidase polypeptide I FIV04_RS07190 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FIV04_RS07190 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FIV04_RS07200 PF00403 Heavy-metal-associated domain FIV04_RS07215 PF00027 Cyclic nucleotide-binding domain FIV04_RS07215 PF13545 Crp-like helix-turn-helix domain FIV04_RS07220 PF00582 Universal stress protein family FIV04_RS07225 PF01171 PP-loop family FIV04_RS07245 PF00005 ABC transporter FIV04_RS07245 PF08402 TOBE domain FIV04_RS07250 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS07255 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS07260 PF13416 Bacterial extracellular solute-binding protein FIV04_RS07265 PF13416 Bacterial extracellular solute-binding protein FIV04_RS07270 PF08448 PAS fold FIV04_RS07270 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS07270 PF00563 EAL domain FIV04_RS07275 PF02146 Sir2 family FIV04_RS07280 PF00909 Ammonium Transporter Family FIV04_RS07295 PF13247 4Fe-4S dicluster domain FIV04_RS07300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FIV04_RS07300 PF00384 Molybdopterin oxidoreductase FIV04_RS07300 PF01568 Molydopterin dinucleotide binding domain FIV04_RS07310 PF02613 Nitrate reductase delta subunit FIV04_RS07330 PF02634 FdhD/NarQ family FIV04_RS07335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS07335 PF00672 HAMP domain FIV04_RS07340 PF12848 ABC transporter FIV04_RS07340 PF00005 ABC transporter FIV04_RS07355 PF12729 Four helix bundle sensory module for signal transduction FIV04_RS07355 PF00672 HAMP domain FIV04_RS07355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS07370 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS07370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS07375 PF00158 Sigma-54 interaction domain FIV04_RS07375 PF00072 Response regulator receiver domain FIV04_RS07375 PF02954 Bacterial regulatory protein, Fis family FIV04_RS07380 PF12849 PBP superfamily domain FIV04_RS07385 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS07390 PF08402 TOBE domain FIV04_RS07390 PF00005 ABC transporter FIV04_RS07395 PF12804 MobA-like NTP transferase domain FIV04_RS07400 PF03453 MoeA N-terminal region (domain I and II) FIV04_RS07400 PF00994 Probable molybdopterin binding domain FIV04_RS07400 PF03454 MoeA C-terminal region (domain IV) FIV04_RS07410 PF00480 ROK family FIV04_RS07415 PF03942 DTW domain FIV04_RS07425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS07425 PF12729 Four helix bundle sensory module for signal transduction FIV04_RS07425 PF00672 HAMP domain FIV04_RS07430 PF00877 NlpC/P60 family FIV04_RS07440 PF03881 Fructosamine kinase FIV04_RS07450 PF00677 Lumazine binding domain FIV04_RS07455 PF01554 MatE FIV04_RS07470 PF00691 OmpA family FIV04_RS07490 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS07495 PF00005 ABC transporter FIV04_RS07495 PF00571 CBS domain FIV04_RS07505 PF02954 Bacterial regulatory protein, Fis family FIV04_RS07505 PF00072 Response regulator receiver domain FIV04_RS07505 PF00158 Sigma-54 interaction domain FIV04_RS07510 PF00534 Glycosyl transferases group 1 FIV04_RS07510 PF13439 Glycosyltransferase Family 4 FIV04_RS07515 PF08323 Starch synthase catalytic domain FIV04_RS07515 PF00534 Glycosyl transferases group 1 FIV04_RS07560 PF02397 Bacterial sugar transferase FIV04_RS07565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS07565 PF03466 LysR substrate binding domain FIV04_RS07570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV04_RS07575 PF00873 AcrB/AcrD/AcrF family FIV04_RS07595 PF13419 Haloacid dehalogenase-like hydrolase FIV04_RS07600 PF00132 Bacterial transferase hexapeptide (six repeats) FIV04_RS07600 PF12464 Maltose acetyltransferase FIV04_RS07620 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS07625 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS07630 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV04_RS07635 PF00005 ABC transporter FIV04_RS07640 PF00664 ABC transporter transmembrane region FIV04_RS07640 PF00005 ABC transporter FIV04_RS07650 PF00561 alpha/beta hydrolase fold FIV04_RS07665 PF00815 Histidinol dehydrogenase FIV04_RS07670 PF03328 HpcH/HpaI aldolase/citrate lyase family FIV04_RS07675 PF00356 Bacterial regulatory proteins, lacI family FIV04_RS07680 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV04_RS07690 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV04_RS07690 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FIV04_RS07695 PF17912 MalK OB fold domain FIV04_RS07695 PF00005 ABC transporter FIV04_RS07695 PF03459 TOBE domain FIV04_RS07705 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS07710 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS07730 PF12392 Collagenase FIV04_RS07730 PF01136 Peptidase family U32 FIV04_RS07755 PF00132 Bacterial transferase hexapeptide (six repeats) FIV04_RS07765 PF00582 Universal stress protein family FIV04_RS07770 PF00875 DNA photolyase FIV04_RS07770 PF03441 FAD binding domain of DNA photolyase FIV04_RS07775 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FIV04_RS07780 PF00106 short chain dehydrogenase FIV04_RS07790 PF13476 AAA domain FIV04_RS07795 PF00149 Calcineurin-like phosphoesterase FIV04_RS07795 PF12320 Type 5 capsule protein repressor C-terminal domain FIV04_RS07800 PF08787 Alginate lyase FIV04_RS07805 PF08787 Alginate lyase FIV04_RS07820 PF07883 Cupin domain FIV04_RS07830 PF00571 CBS domain FIV04_RS07835 PF07733 Bacterial DNA polymerase III alpha NTPase domain FIV04_RS07835 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FIV04_RS07835 PF14480 DNA polymerase III polC-type N-terminus I FIV04_RS07835 PF00929 Exonuclease FIV04_RS07835 PF14579 Helix-hairpin-helix motif FIV04_RS07835 PF11490 DNA polymerase III polC-type N-terminus II FIV04_RS07835 PF02811 PHP domain FIV04_RS07840 PF00474 Sodium:solute symporter family FIV04_RS07850 PF00672 HAMP domain FIV04_RS07850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS07850 PF02743 Cache domain FIV04_RS07855 PF14310 Fibronectin type III-like domain FIV04_RS07855 PF00933 Glycosyl hydrolase family 3 N terminal domain FIV04_RS07855 PF01915 Glycosyl hydrolase family 3 C-terminal domain FIV04_RS07860 PF01810 LysE type translocator FIV04_RS07865 PF00583 Acetyltransferase (GNAT) family FIV04_RS07870 PF07715 TonB-dependent Receptor Plug Domain FIV04_RS07870 PF00593 TonB dependent receptor FIV04_RS07875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS07875 PF03466 LysR substrate binding domain FIV04_RS07885 PF13533 Biotin-lipoyl like FIV04_RS07890 PF00196 Bacterial regulatory proteins, luxR family FIV04_RS07890 PF00072 Response regulator receiver domain FIV04_RS07895 PF02321 Outer membrane efflux protein FIV04_RS07900 PF00664 ABC transporter transmembrane region FIV04_RS07900 PF00005 ABC transporter FIV04_RS07905 PF00664 ABC transporter transmembrane region FIV04_RS07905 PF00005 ABC transporter FIV04_RS07910 PF00704 Glycosyl hydrolases family 18 FIV04_RS07915 PF12792 CSS motif domain associated with EAL FIV04_RS07915 PF00563 EAL domain FIV04_RS07920 PF00582 Universal stress protein family FIV04_RS07925 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV04_RS07930 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FIV04_RS07935 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV04_RS07940 PF00171 Aldehyde dehydrogenase family FIV04_RS07945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS07945 PF03466 LysR substrate binding domain FIV04_RS07950 PF01266 FAD dependent oxidoreductase FIV04_RS07955 PF08943 CsiD FIV04_RS07960 PF03466 LysR substrate binding domain FIV04_RS07960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS07965 PF00202 Aminotransferase class-III FIV04_RS07995 PF07687 Peptidase dimerisation domain FIV04_RS07995 PF01546 Peptidase family M20/M25/M40 FIV04_RS08015 PF04204 Homoserine O-succinyltransferase FIV04_RS08025 PF05971 RNA methyltransferase FIV04_RS08030 PF01863 Protein of unknown function DUF45 FIV04_RS08040 PF03466 LysR substrate binding domain FIV04_RS08040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS08045 PF07690 Major Facilitator Superfamily FIV04_RS08055 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS08065 PF00583 Acetyltransferase (GNAT) family FIV04_RS08070 PF00005 ABC transporter FIV04_RS08075 PF01032 FecCD transport family FIV04_RS08080 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FIV04_RS08095 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FIV04_RS08100 PF02654 Cobalamin-5-phosphate synthase FIV04_RS08105 PF02277 Phosphoribosyltransferase FIV04_RS08110 PF01613 Flavin reductase like domain FIV04_RS08115 PF13460 NAD(P)H-binding FIV04_RS08120 PF00375 Sodium:dicarboxylate symporter family FIV04_RS08125 PF03928 Haem-degrading FIV04_RS08130 PF00248 Aldo/keto reductase family FIV04_RS08135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS08135 PF03466 LysR substrate binding domain FIV04_RS08145 PF02028 BCCT, betaine/carnitine/choline family transporter FIV04_RS08150 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FIV04_RS08155 PF02311 AraC-like ligand binding domain FIV04_RS08155 PF12833 Helix-turn-helix domain FIV04_RS08165 PF04116 Fatty acid hydroxylase superfamily FIV04_RS08170 PF07196 Flagellin hook IN motif FIV04_RS08170 PF00669 Bacterial flagellin N-terminal helical region FIV04_RS08170 PF00700 Bacterial flagellin C-terminal helical region FIV04_RS08175 PF08411 Exonuclease C-terminal FIV04_RS08175 PF00929 Exonuclease FIV04_RS08180 PF03788 LrgA family FIV04_RS08185 PF04172 LrgB-like family FIV04_RS08190 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region FIV04_RS08190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FIV04_RS08195 PF02222 ATP-grasp domain FIV04_RS08200 PF05724 Thiopurine S-methyltransferase (TPMT) FIV04_RS08215 PF00216 Bacterial DNA-binding protein FIV04_RS08230 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS08230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS08230 PF00672 HAMP domain FIV04_RS08235 PF00072 Response regulator receiver domain FIV04_RS08235 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS08245 PF00950 ABC 3 transport family FIV04_RS08250 PF00950 ABC 3 transport family FIV04_RS08255 PF00005 ABC transporter FIV04_RS08260 PF01297 Zinc-uptake complex component A periplasmic FIV04_RS08265 PF01475 Ferric uptake regulator family FIV04_RS08275 PF00672 HAMP domain FIV04_RS08275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS08275 PF02743 Cache domain FIV04_RS08290 PF02583 Metal-sensitive transcriptional repressor FIV04_RS08300 PF17954 Quercetinase C-terminal cupin domain FIV04_RS08300 PF02678 Pirin FIV04_RS08305 PF03466 LysR substrate binding domain FIV04_RS08305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS08315 PF03466 LysR substrate binding domain FIV04_RS08315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS08320 PF01039 Carboxyl transferase domain FIV04_RS08320 PF17848 Acetyl-coA carboxylase zinc finger domain FIV04_RS08330 PF01810 LysE type translocator FIV04_RS08340 PF01053 Cys/Met metabolism PLP-dependent enzyme FIV04_RS08345 PF01037 Lrp/AsnC ligand binding domain FIV04_RS08355 PF13700 Domain of unknown function (DUF4158) FIV04_RS08355 PF01526 Tn3 transposase DDE domain FIV04_RS08360 PF00403 Heavy-metal-associated domain FIV04_RS08360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV04_RS08360 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS08370 PF00403 Heavy-metal-associated domain FIV04_RS08375 PF02411 MerT mercuric transport protein FIV04_RS08380 PF00376 MerR family regulatory protein FIV04_RS08380 PF09278 MerR, DNA binding FIV04_RS08385 PF00239 Resolvase, N terminal domain FIV04_RS08385 PF02796 Helix-turn-helix domain of resolvase FIV04_RS08390 PF00005 ABC transporter FIV04_RS08390 PF12848 ABC transporter FIV04_RS08400 PF01734 Patatin-like phospholipase FIV04_RS08430 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV04_RS08430 PF00175 Oxidoreductase NAD-binding domain FIV04_RS08430 PF00970 Oxidoreductase FAD-binding domain FIV04_RS08475 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FIV04_RS08475 PF03484 tRNA synthetase B5 domain FIV04_RS08475 PF03483 B3/4 domain FIV04_RS08475 PF03147 Ferredoxin-fold anticodon binding domain FIV04_RS08475 PF01588 Putative tRNA binding domain FIV04_RS08480 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FIV04_RS08480 PF01409 tRNA synthetases class II core domain (F) FIV04_RS08485 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS08485 PF00072 Response regulator receiver domain FIV04_RS08525 PF11898 Domain of unknown function (DUF3418) FIV04_RS08525 PF04408 Helicase associated domain (HA2) FIV04_RS08525 PF00271 Helicase conserved C-terminal domain FIV04_RS08525 PF00270 DEAD/DEAH box helicase FIV04_RS08525 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FIV04_RS08530 PF02525 Flavodoxin-like fold FIV04_RS08535 PF01915 Glycosyl hydrolase family 3 C-terminal domain FIV04_RS08535 PF14310 Fibronectin type III-like domain FIV04_RS08535 PF00933 Glycosyl hydrolase family 3 N terminal domain FIV04_RS08545 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS08550 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS08555 PF13416 Bacterial extracellular solute-binding protein FIV04_RS08560 PF00356 Bacterial regulatory proteins, lacI family FIV04_RS08565 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FIV04_RS08570 PF17912 MalK OB fold domain FIV04_RS08570 PF03459 TOBE domain FIV04_RS08570 PF00005 ABC transporter FIV04_RS08610 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS08640 PF17151 Periplasmic sensor domain FIV04_RS08640 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS08650 PF00012 Hsp70 protein FIV04_RS08655 PF00012 Hsp70 protein FIV04_RS08670 PF13302 Acetyltransferase (GNAT) domain FIV04_RS08675 PF00158 Sigma-54 interaction domain FIV04_RS08675 PF18024 Helix-turn-helix domain FIV04_RS08680 PF05128 Domain of unknown function (DUF697) FIV04_RS08685 PF04317 YcjX-like family, DUF463 FIV04_RS08700 PF00425 chorismate binding enzyme FIV04_RS08700 PF04715 Anthranilate synthase component I, N terminal region FIV04_RS08705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS08705 PF09456 RcsC Alpha-Beta-Loop (ABL) FIV04_RS08705 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS08705 PF00072 Response regulator receiver domain FIV04_RS08715 PF00293 NUDIX domain FIV04_RS08720 PF03222 Tryptophan/tyrosine permease family FIV04_RS08725 PF03315 Serine dehydratase beta chain FIV04_RS08725 PF03313 Serine dehydratase alpha chain FIV04_RS08730 PF03222 Tryptophan/tyrosine permease family FIV04_RS08735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS08735 PF00672 HAMP domain FIV04_RS08735 PF12729 Four helix bundle sensory module for signal transduction FIV04_RS08740 PF01336 OB-fold nucleic acid binding domain FIV04_RS08740 PF00152 tRNA synthetases class II (D, K and N) FIV04_RS08760 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS08760 PF00155 Aminotransferase class I and II FIV04_RS08770 PF01966 HD domain FIV04_RS08770 PF00672 HAMP domain FIV04_RS08775 PF00155 Aminotransferase class I and II FIV04_RS08795 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS08795 PF07694 5TMR of 5TMR-LYT FIV04_RS08805 PF00266 Aminotransferase class-V FIV04_RS08815 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV04_RS08815 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS08815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS08830 PF04993 TfoX N-terminal domain FIV04_RS08830 PF04994 TfoX C-terminal domain FIV04_RS08840 PF03956 Lysine exporter LysO FIV04_RS08850 PF00282 Pyridoxal-dependent decarboxylase conserved domain FIV04_RS08855 PF01418 Helix-turn-helix domain, rpiR family FIV04_RS08855 PF01380 SIS domain FIV04_RS08860 PF00465 Iron-containing alcohol dehydrogenase FIV04_RS08865 PF00462 Glutaredoxin FIV04_RS08870 PF02080 TrkA-C domain FIV04_RS08870 PF06826 Predicted Permease Membrane Region FIV04_RS08875 PF12241 Trans-2-enoyl-CoA reductase catalytic region FIV04_RS08875 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FIV04_RS08875 PF07055 Enoyl reductase FAD binding domain FIV04_RS08885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV04_RS08885 PF09317 Domain of unknown function (DUF1974) FIV04_RS08885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV04_RS08885 PF02770 Acyl-CoA dehydrogenase, middle domain FIV04_RS08890 PF00440 Bacterial regulatory proteins, tetR family FIV04_RS08890 PF16295 Tetracyclin repressor-like, C-terminal domain FIV04_RS08905 PF06965 Na+/H+ antiporter 1 FIV04_RS08920 PF00005 ABC transporter FIV04_RS08925 PF01554 MatE FIV04_RS08930 PF00034 Cytochrome c FIV04_RS08930 PF03150 Di-haem cytochrome c peroxidase FIV04_RS08930 PF14376 Haem-binding domain FIV04_RS08935 PF13460 NAD(P)H-binding FIV04_RS08935 PF11066 Protein of unknown function (DUF2867) FIV04_RS08945 PF07690 Major Facilitator Superfamily FIV04_RS08950 PF00849 RNA pseudouridylate synthase FIV04_RS08950 PF01479 S4 domain FIV04_RS08955 PF00271 Helicase conserved C-terminal domain FIV04_RS08955 PF04851 Type III restriction enzyme, res subunit FIV04_RS08965 PF00072 Response regulator receiver domain FIV04_RS08965 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS08970 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS08970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS08970 PF00672 HAMP domain FIV04_RS08980 PF00675 Insulinase (Peptidase family M16) FIV04_RS08980 PF05193 Peptidase M16 inactive domain FIV04_RS08985 PF06472 ABC transporter transmembrane region 2 FIV04_RS08985 PF00005 ABC transporter FIV04_RS08990 PF07715 TonB-dependent Receptor Plug Domain FIV04_RS09000 PF01618 MotA/TolQ/ExbB proton channel family FIV04_RS09005 PF01618 MotA/TolQ/ExbB proton channel family FIV04_RS09010 PF02472 Biopolymer transport protein ExbD/TolR FIV04_RS09030 PF00535 Glycosyl transferase family 2 FIV04_RS09035 PF01386 Ribosomal L25p family FIV04_RS09130 PF02492 CobW/HypB/UreG, nucleotide-binding domain FIV04_RS09130 PF07683 Cobalamin synthesis protein cobW C-terminal domain FIV04_RS09140 PF02567 Phenazine biosynthesis-like protein FIV04_RS09155 PF00924 Mechanosensitive ion channel FIV04_RS09155 PF12795 Mechanosensitive ion channel porin domain FIV04_RS09155 PF12794 Mechanosensitive ion channel inner membrane domain 1 FIV04_RS09165 PF03466 LysR substrate binding domain FIV04_RS09165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS09180 PF02470 MlaD protein FIV04_RS09185 PF04403 Paraquat-inducible protein A FIV04_RS09190 PF08787 Alginate lyase FIV04_RS09195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS09195 PF03466 LysR substrate binding domain FIV04_RS09215 PF07715 TonB-dependent Receptor Plug Domain FIV04_RS09215 PF00593 TonB dependent receptor FIV04_RS09220 PF11008 Protein of unknown function (DUF2846) FIV04_RS09225 PF00384 Molybdopterin oxidoreductase FIV04_RS09225 PF18364 Molybdopterin oxidoreductase N-terminal domain FIV04_RS09225 PF01568 Molydopterin dinucleotide binding domain FIV04_RS09230 PF03264 NapC/NirT cytochrome c family, N-terminal region FIV04_RS09240 PF00246 Zinc carboxypeptidase FIV04_RS09240 PF18027 Cytosolic carboxypeptidase N-terminal domain FIV04_RS09250 PF00271 Helicase conserved C-terminal domain FIV04_RS09250 PF00270 DEAD/DEAH box helicase FIV04_RS09260 PF06945 Protein of unknown function (DUF1289) FIV04_RS09270 PF13416 Bacterial extracellular solute-binding protein FIV04_RS09275 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS09280 PF00005 ABC transporter FIV04_RS09285 PF01066 CDP-alcohol phosphatidyltransferase FIV04_RS09290 PF02926 THUMP domain FIV04_RS09290 PF10672 S-adenosylmethionine-dependent methyltransferase FIV04_RS09290 PF01170 Putative RNA methylase family UPF0020 FIV04_RS09295 PF00849 RNA pseudouridylate synthase FIV04_RS09300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS09300 PF00672 HAMP domain FIV04_RS09300 PF12729 Four helix bundle sensory module for signal transduction FIV04_RS09305 PF00209 Sodium:neurotransmitter symporter family FIV04_RS09310 PF13396 Phospholipase_D-nuclease N-terminal FIV04_RS09310 PF13091 PLD-like domain FIV04_RS09315 PF01053 Cys/Met metabolism PLP-dependent enzyme FIV04_RS09330 PF03352 Methyladenine glycosylase FIV04_RS09335 PF00873 AcrB/AcrD/AcrF family FIV04_RS09340 PF13533 Biotin-lipoyl like FIV04_RS09345 PF13533 Biotin-lipoyl like FIV04_RS09350 PF04024 PspC domain FIV04_RS09355 PF06667 Phage shock protein B FIV04_RS09360 PF04012 PspA/IM30 family FIV04_RS09365 PF02954 Bacterial regulatory protein, Fis family FIV04_RS09365 PF00158 Sigma-54 interaction domain FIV04_RS09370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV04_RS09375 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS09380 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS09380 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV04_RS09385 PF00005 ABC transporter FIV04_RS09385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV04_RS09390 PF00005 ABC transporter FIV04_RS09405 PF01368 DHH family FIV04_RS09405 PF02833 DHHA2 domain FIV04_RS09415 PF01568 Molydopterin dinucleotide binding domain FIV04_RS09415 PF18364 Molybdopterin oxidoreductase N-terminal domain FIV04_RS09415 PF00384 Molybdopterin oxidoreductase FIV04_RS09420 PF03264 NapC/NirT cytochrome c family, N-terminal region FIV04_RS09425 PF06796 Periplasmic nitrate reductase protein NapE FIV04_RS09430 PF03649 Uncharacterised protein family (UPF0014) FIV04_RS09435 PF01226 Formate/nitrite transporter FIV04_RS09460 PF00265 Thymidine kinase FIV04_RS09465 PF01406 tRNA synthetases class I (C) catalytic domain FIV04_RS09465 PF09190 DALR domain FIV04_RS09470 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FIV04_RS09475 PF00149 Calcineurin-like phosphoesterase FIV04_RS09480 PF08668 HDOD domain FIV04_RS09480 PF00563 EAL domain FIV04_RS09485 PF02810 SEC-C motif FIV04_RS09490 PF01502 Phosphoribosyl-AMP cyclohydrolase FIV04_RS09490 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FIV04_RS09495 PF00977 Histidine biosynthesis protein FIV04_RS09500 PF00977 Histidine biosynthesis protein FIV04_RS09505 PF00117 Glutamine amidotransferase class-I FIV04_RS09510 PF00475 Imidazoleglycerol-phosphate dehydratase FIV04_RS09510 PF08645 Polynucleotide kinase 3 phosphatase FIV04_RS09515 PF00155 Aminotransferase class I and II FIV04_RS09520 PF00815 Histidinol dehydrogenase FIV04_RS09525 PF08029 HisG, C-terminal domain FIV04_RS09525 PF01634 ATP phosphoribosyltransferase FIV04_RS09530 PF03553 Na+/H+ antiporter family FIV04_RS09535 PF00816 H-NS histone family FIV04_RS09540 PF00294 pfkB family carbohydrate kinase FIV04_RS09555 PF04356 Protein of unknown function (DUF489) FIV04_RS09560 PF08328 Adenylosuccinate lyase C-terminal FIV04_RS09560 PF00206 Lyase FIV04_RS09565 PF01435 Peptidase family M48 FIV04_RS09575 PF08241 Methyltransferase domain FIV04_RS09580 PF00155 Aminotransferase class I and II FIV04_RS09585 PF04055 Radical SAM superfamily FIV04_RS09585 PF06968 Biotin and Thiamin Synthesis associated domain FIV04_RS09590 PF00202 Aminotransferase class-III FIV04_RS09595 PF01258 Prokaryotic dksA/traR C4-type zinc finger FIV04_RS09600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FIV04_RS09600 PF02403 Seryl-tRNA synthetase N-terminal domain FIV04_RS09605 PF00004 ATPase family associated with various cellular activities (AAA) FIV04_RS09605 PF16193 AAA C-terminal domain FIV04_RS09605 PF12002 MgsA AAA+ ATPase C terminal FIV04_RS09610 PF03548 Outer membrane lipoprotein carrier protein LolA FIV04_RS09615 PF09397 Ftsk gamma domain FIV04_RS09615 PF01580 FtsK/SpoIIIE family FIV04_RS09615 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FIV04_RS09615 PF17854 FtsK alpha domain FIV04_RS09620 PF01037 Lrp/AsnC ligand binding domain FIV04_RS09625 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FIV04_RS09625 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FIV04_RS09635 PF03466 LysR substrate binding domain FIV04_RS09635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS09645 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FIV04_RS09660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV04_RS09660 PF00005 ABC transporter FIV04_RS09665 PF00005 ABC transporter FIV04_RS09665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV04_RS09670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV04_RS09675 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV04_RS09675 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS09680 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS09685 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FIV04_RS09690 PF18073 Rubredoxin metal binding domain FIV04_RS09695 PF06305 Lipopolysaccharide assembly protein A domain FIV04_RS09700 PF00216 Bacterial DNA-binding protein FIV04_RS09705 PF00575 S1 RNA binding domain FIV04_RS09710 PF02224 Cytidylate kinase FIV04_RS09715 PF02348 Cytidylyltransferase FIV04_RS09720 PF03966 Trm112p-like protein FIV04_RS09725 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FIV04_RS09730 PF00664 ABC transporter transmembrane region FIV04_RS09730 PF00005 ABC transporter FIV04_RS09735 PF03772 Competence protein FIV04_RS09735 PF00753 Metallo-beta-lactamase superfamily FIV04_RS09745 PF12704 MacB-like periplasmic core domain FIV04_RS09745 PF02687 FtsX-like permease family FIV04_RS09750 PF00005 ABC transporter FIV04_RS09755 PF12704 MacB-like periplasmic core domain FIV04_RS09755 PF02687 FtsX-like permease family FIV04_RS09765 PF00271 Helicase conserved C-terminal domain FIV04_RS09765 PF02559 CarD-like/TRCF domain FIV04_RS09765 PF00270 DEAD/DEAH box helicase FIV04_RS09765 PF17757 UvrB interaction domain FIV04_RS09765 PF03461 TRCF domain FIV04_RS09775 PF13302 Acetyltransferase (GNAT) domain FIV04_RS09790 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FIV04_RS09790 PF14579 Helix-hairpin-helix motif FIV04_RS09790 PF02811 PHP domain FIV04_RS09790 PF07733 Bacterial DNA polymerase III alpha NTPase domain FIV04_RS09790 PF01336 OB-fold nucleic acid binding domain FIV04_RS09795 PF00072 Response regulator receiver domain FIV04_RS09795 PF01584 CheW-like domain FIV04_RS09800 PF00480 ROK family FIV04_RS09805 PF02887 Pyruvate kinase, alpha/beta domain FIV04_RS09805 PF00224 Pyruvate kinase, barrel domain FIV04_RS09810 PF01734 Patatin-like phospholipase FIV04_RS09830 PF02378 Phosphotransferase system, EIIC FIV04_RS09830 PF00367 phosphotransferase system, EIIB FIV04_RS09835 PF01026 TatD related DNase FIV04_RS09840 PF09115 DNA polymerase III, delta subunit, C terminal FIV04_RS09845 PF02223 Thymidylate kinase FIV04_RS09850 PF02618 YceG-like family FIV04_RS09855 PF01063 Amino-transferase class IV FIV04_RS09860 PF00109 Beta-ketoacyl synthase, N-terminal domain FIV04_RS09860 PF02801 Beta-ketoacyl synthase, C-terminal domain FIV04_RS09865 PF00550 Phosphopantetheine attachment site FIV04_RS09875 PF00698 Acyl transferase domain FIV04_RS09880 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FIV04_RS09880 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FIV04_RS09885 PF02504 Fatty acid synthesis protein FIV04_RS09890 PF01783 Ribosomal L32p protein family FIV04_RS09895 PF02620 Large ribosomal RNA subunit accumulation protein YceD FIV04_RS09900 PF02545 Maf-like protein FIV04_RS09905 PF01479 S4 domain FIV04_RS09905 PF00849 RNA pseudouridylate synthase FIV04_RS09910 PF00575 S1 RNA binding domain FIV04_RS09910 PF10150 Ribonuclease E/G family FIV04_RS09910 PF12111 Polyribonucleotide phosphorylase C terminal FIV04_RS09915 PF00916 Sulfate permease family FIV04_RS09915 PF01740 STAS domain FIV04_RS09920 PF01451 Low molecular weight phosphotyrosine protein phosphatase FIV04_RS09925 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FIV04_RS09925 PF12557 Cob(I)alamin adenosyltransferase N terminal FIV04_RS09930 PF05170 AsmA family FIV04_RS09935 PF00485 Phosphoribulokinase / Uridine kinase family FIV04_RS09940 PF10609 NUBPL iron-transfer P-loop NTPase FIV04_RS09945 PF01588 Putative tRNA binding domain FIV04_RS09945 PF09334 tRNA synthetases class I (M) FIV04_RS09955 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS09955 PF07840 FadR C-terminal domain FIV04_RS09960 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FIV04_RS09965 PF02600 Disulfide bond formation protein DsbB FIV04_RS09970 PF02810 SEC-C motif FIV04_RS09970 PF07517 SecA DEAD-like domain FIV04_RS09970 PF07516 SecA Wing and Scaffold domain FIV04_RS09970 PF01043 SecA preprotein cross-linking domain FIV04_RS09975 PF01207 Dihydrouridine synthase (Dus) FIV04_RS09980 PF05230 MASE2 domain FIV04_RS09980 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS09985 PF00128 Alpha amylase, catalytic domain FIV04_RS09985 PF02903 Alpha amylase, N-terminal ig-like domain FIV04_RS09995 PF04217 Protein of unknown function, DUF412 FIV04_RS10000 PF00871 Acetokinase family FIV04_RS10005 PF07085 DRTGG domain FIV04_RS10005 PF01515 Phosphate acetyl/butaryl transferase FIV04_RS10010 PF13409 Glutathione S-transferase, N-terminal domain FIV04_RS10015 PF00005 ABC transporter FIV04_RS10015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV04_RS10020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV04_RS10020 PF00005 ABC transporter FIV04_RS10025 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV04_RS10025 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS10030 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS10035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV04_RS10040 PF02391 MoaE protein FIV04_RS10045 PF02597 ThiS family FIV04_RS10050 PF01967 MoaC family FIV04_RS10055 PF00994 Probable molybdopterin binding domain FIV04_RS10060 PF06463 Molybdenum Cofactor Synthesis C FIV04_RS10060 PF04055 Radical SAM superfamily FIV04_RS10065 PF01933 Uncharacterised protein family UPF0052 FIV04_RS10070 PF01627 Hpt domain FIV04_RS10075 PF00158 Sigma-54 interaction domain FIV04_RS10075 PF02954 Bacterial regulatory protein, Fis family FIV04_RS10075 PF00072 Response regulator receiver domain FIV04_RS10080 PF04851 Type III restriction enzyme, res subunit FIV04_RS10080 PF02151 UvrB/uvrC motif FIV04_RS10080 PF12344 Ultra-violet resistance protein B FIV04_RS10080 PF00271 Helicase conserved C-terminal domain FIV04_RS10080 PF17757 UvrB interaction domain FIV04_RS10090 PF02508 Rnf-Nqr subunit, membrane protein FIV04_RS10095 PF04060 Putative Fe-S cluster FIV04_RS10100 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FIV04_RS10100 PF12838 4Fe-4S dicluster domain FIV04_RS10100 PF10531 SLBB domain FIV04_RS10100 PF13375 RnfC Barrel sandwich hybrid domain FIV04_RS10105 PF03116 NQR2, RnfD, RnfE family FIV04_RS10110 PF04205 FMN-binding domain FIV04_RS10115 PF02508 Rnf-Nqr subunit, membrane protein FIV04_RS10120 PF00633 Helix-hairpin-helix motif FIV04_RS10120 PF10576 Iron-sulfur binding domain of endonuclease III FIV04_RS10120 PF00730 HhH-GPD superfamily base excision DNA repair protein FIV04_RS10125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV04_RS10130 PF10952 Protein of unknown function (DUF2753) FIV04_RS10135 PF00691 OmpA family FIV04_RS10135 PF18393 MotY N-terminal domain FIV04_RS10140 PF00929 Exonuclease FIV04_RS10145 PF03553 Na+/H+ antiporter family FIV04_RS10145 PF13726 Na+-H+ antiporter family FIV04_RS10155 PF00672 HAMP domain FIV04_RS10155 PF01627 Hpt domain FIV04_RS10155 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS10155 PF00072 Response regulator receiver domain FIV04_RS10155 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FIV04_RS10155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS10165 PF00462 Glutaredoxin FIV04_RS10170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FIV04_RS10170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FIV04_RS10185 PF00171 Aldehyde dehydrogenase family FIV04_RS10185 PF00465 Iron-containing alcohol dehydrogenase FIV04_RS10190 PF01914 MarC family integral membrane protein FIV04_RS10195 PF00027 Cyclic nucleotide-binding domain FIV04_RS10195 PF00520 Ion transport protein FIV04_RS10200 PF01118 Semialdehyde dehydrogenase, NAD binding domain FIV04_RS10200 PF02774 Semialdehyde dehydrogenase, dimerisation domain FIV04_RS10205 PF03553 Na+/H+ antiporter family FIV04_RS10215 PF04245 37-kD nucleoid-associated bacterial protein FIV04_RS10220 PF07208 Protein of unknown function (DUF1414) FIV04_RS10225 PF00884 Sulfatase FIV04_RS10225 PF11893 Domain of unknown function (DUF3413) FIV04_RS10240 PF00850 Histone deacetylase domain FIV04_RS10245 PF00106 short chain dehydrogenase FIV04_RS10255 PF01751 Toprim domain FIV04_RS10255 PF01131 DNA topoisomerase FIV04_RS10260 PF00881 Nitroreductase family FIV04_RS10265 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS10265 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FIV04_RS10270 PF01343 Peptidase family S49 FIV04_RS10275 PF17763 Glutaminase/Asparaginase C-terminal domain FIV04_RS10275 PF00710 Asparaginase, N-terminal FIV04_RS10280 PF07023 Protein of unknown function (DUF1315) FIV04_RS10290 PF01641 SelR domain FIV04_RS10295 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FIV04_RS10295 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FIV04_RS10300 PF01263 Aldose 1-epimerase FIV04_RS10305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS10305 PF13426 PAS domain FIV04_RS10305 PF08447 PAS fold FIV04_RS10310 PF13847 Methyltransferase domain FIV04_RS10325 PF02028 BCCT, betaine/carnitine/choline family transporter FIV04_RS10330 PF03692 Putative zinc- or iron-chelating domain FIV04_RS10335 PF03692 Putative zinc- or iron-chelating domain FIV04_RS10340 PF13662 Toprim domain FIV04_RS10340 PF02132 RecR protein FIV04_RS10345 PF02575 YbaB/EbfC DNA-binding family FIV04_RS10350 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FIV04_RS10350 PF12170 DNA polymerase III tau subunit V interacting with alpha FIV04_RS10350 PF12169 DNA polymerase III subunits gamma and tau domain III FIV04_RS10355 PF00156 Phosphoribosyl transferase domain FIV04_RS10360 PF04304 Protein of unknown function (DUF454) FIV04_RS10365 PF00072 Response regulator receiver domain FIV04_RS10370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS10370 PF03466 LysR substrate binding domain FIV04_RS10375 PF00156 Phosphoribosyl transferase domain FIV04_RS10380 PF02674 Colicin V production protein FIV04_RS10385 PF05036 Sporulation related domain FIV04_RS10390 PF08245 Mur ligase middle domain FIV04_RS10390 PF02875 Mur ligase family, glutamate ligase domain FIV04_RS10395 PF17848 Acetyl-coA carboxylase zinc finger domain FIV04_RS10395 PF01039 Carboxyl transferase domain FIV04_RS10405 PF01416 tRNA pseudouridine synthase FIV04_RS10415 PF02774 Semialdehyde dehydrogenase, dimerisation domain FIV04_RS10415 PF01118 Semialdehyde dehydrogenase, NAD binding domain FIV04_RS10420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIV04_RS10420 PF11890 Domain of unknown function (DUF3410) FIV04_RS10420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIV04_RS10425 PF00109 Beta-ketoacyl synthase, N-terminal domain FIV04_RS10425 PF02801 Beta-ketoacyl synthase, C-terminal domain FIV04_RS10430 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FIV04_RS10430 PF01266 FAD dependent oxidoreductase FIV04_RS10435 PF03358 NADPH-dependent FMN reductase FIV04_RS10440 PF08891 YfcL protein FIV04_RS10445 PF04315 Elongation factor P hydroxylase FIV04_RS10450 PF03458 UPF0126 domain FIV04_RS10455 PF01264 Chorismate synthase FIV04_RS10470 PF03793 PASTA domain FIV04_RS10470 PF00069 Protein kinase domain FIV04_RS10480 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FIV04_RS10480 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FIV04_RS10485 PF01773 Na+ dependent nucleoside transporter N-terminus FIV04_RS10485 PF07662 Na+ dependent nucleoside transporter C-terminus FIV04_RS10485 PF07670 Nucleoside recognition FIV04_RS10490 PF03466 LysR substrate binding domain FIV04_RS10490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS10495 PF13406 Transglycosylase SLT domain FIV04_RS10500 PF05166 YcgL domain FIV04_RS10505 PF03775 Septum formation inhibitor MinC, C-terminal domain FIV04_RS10505 PF05209 Septum formation inhibitor MinC, N-terminal domain FIV04_RS10510 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FIV04_RS10515 PF03776 Septum formation topological specificity factor MinE FIV04_RS10525 PF01612 3'-5' exonuclease FIV04_RS10525 PF00570 HRDC domain FIV04_RS10530 PF13193 AMP-binding enzyme C-terminal domain FIV04_RS10530 PF00501 AMP-binding enzyme FIV04_RS10535 PF00561 alpha/beta hydrolase fold FIV04_RS10540 PF03843 Outer membrane lipoprotein Slp family FIV04_RS10550 PF00814 Glycoprotease family FIV04_RS10555 PF13307 Helicase C-terminal domain FIV04_RS10555 PF04851 Type III restriction enzyme, res subunit FIV04_RS10560 PF01842 ACT domain FIV04_RS10560 PF00551 Formyl transferase FIV04_RS10565 PF06185 YecM protein FIV04_RS10570 PF00750 tRNA synthetases class I (R) FIV04_RS10570 PF05746 DALR anticodon binding domain FIV04_RS10570 PF03485 Arginyl tRNA synthetase N terminal domain FIV04_RS10585 PF07664 Ferrous iron transport protein B C terminus FIV04_RS10585 PF07670 Nucleoside recognition FIV04_RS10585 PF02421 Ferrous iron transport protein B FIV04_RS10590 PF04023 FeoA domain FIV04_RS10600 PF12833 Helix-turn-helix domain FIV04_RS10605 PF01297 Zinc-uptake complex component A periplasmic FIV04_RS10610 PF00005 ABC transporter FIV04_RS10615 PF00950 ABC 3 transport family FIV04_RS10620 PF02629 CoA binding domain FIV04_RS10620 PF00549 CoA-ligase FIV04_RS10625 PF08442 ATP-grasp domain FIV04_RS10625 PF00549 CoA-ligase FIV04_RS10630 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FIV04_RS10630 PF00364 Biotin-requiring enzyme FIV04_RS10630 PF02817 e3 binding domain FIV04_RS10635 PF02779 Transketolase, pyrimidine binding domain FIV04_RS10635 PF16870 2-oxoglutarate dehydrogenase C-terminal FIV04_RS10635 PF00676 Dehydrogenase E1 component FIV04_RS10635 PF16078 2-oxoglutarate dehydrogenase N-terminus FIV04_RS10640 PF13085 2Fe-2S iron-sulfur cluster binding domain FIV04_RS10645 PF02910 Fumarate reductase flavoprotein C-term FIV04_RS10645 PF00890 FAD binding domain FIV04_RS10650 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FIV04_RS10655 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FIV04_RS10660 PF00285 Citrate synthase, C-terminal domain FIV04_RS10665 PF01784 NIF3 (NGG1p interacting factor 3) FIV04_RS10675 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FIV04_RS10675 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FIV04_RS10675 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FIV04_RS10675 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FIV04_RS10680 PF17206 SeqA protein N-terminal domain FIV04_RS10680 PF03925 SeqA protein C-terminal domain FIV04_RS10685 PF12697 Alpha/beta hydrolase family FIV04_RS10695 PF00258 Flavodoxin FIV04_RS10705 PF01475 Ferric uptake regulator family FIV04_RS10710 PF07963 Prokaryotic N-terminal methylation motif FIV04_RS10710 PF00114 Pilin (bacterial filament) FIV04_RS10715 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FIV04_RS10715 PF00749 tRNA synthetases class I (E and Q), catalytic domain FIV04_RS10720 PF02378 Phosphotransferase system, EIIC FIV04_RS10720 PF00367 phosphotransferase system, EIIB FIV04_RS10720 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FIV04_RS10725 PF01979 Amidohydrolase family FIV04_RS10730 PF00480 ROK family FIV04_RS10730 PF01047 MarR family FIV04_RS10735 PF00999 Sodium/hydrogen exchanger family FIV04_RS10735 PF02254 TrkA-N domain FIV04_RS10740 PF13537 Glutamine amidotransferase domain FIV04_RS10740 PF00733 Asparagine synthase FIV04_RS10745 PF02357 Transcription termination factor nusG FIV04_RS10750 PF00854 POT family FIV04_RS10755 PF00762 Ferrochelatase FIV04_RS10760 PF05191 Adenylate kinase, active site lid FIV04_RS10765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS10765 PF00183 Hsp90 protein FIV04_RS10770 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS10775 PF17323 Trans-membrane regulatory protein ToxS FIV04_RS10785 PF12850 Calcineurin-like phosphoesterase superfamily domain FIV04_RS10800 PF07556 Protein of unknown function (DUF1538) FIV04_RS10805 PF07556 Protein of unknown function (DUF1538) FIV04_RS10810 PF01370 NAD dependent epimerase/dehydratase family FIV04_RS10810 PF08338 Domain of unknown function (DUF1731) FIV04_RS10815 PF00106 short chain dehydrogenase FIV04_RS10820 PF00085 Thioredoxin FIV04_RS10825 PF01145 SPFH domain / Band 7 family FIV04_RS10825 PF16200 C-terminal region of band_7 FIV04_RS10835 PF13411 MerR HTH family regulatory protein FIV04_RS10845 PF13609 Gram-negative porin FIV04_RS10855 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FIV04_RS10855 PF01653 NAD-dependent DNA ligase adenylation domain FIV04_RS10855 PF00533 BRCA1 C Terminus (BRCT) domain FIV04_RS10855 PF12826 Helix-hairpin-helix motif FIV04_RS10855 PF03120 NAD-dependent DNA ligase OB-fold domain FIV04_RS10860 PF04354 ZipA, C-terminal FtsZ-binding domain FIV04_RS10870 PF00291 Pyridoxal-phosphate dependent enzyme FIV04_RS10880 PF00381 PTS HPr component phosphorylation site FIV04_RS10885 PF02896 PEP-utilising enzyme, TIM barrel domain FIV04_RS10885 PF05524 PEP-utilising enzyme, N-terminal FIV04_RS10885 PF00391 PEP-utilising enzyme, mobile domain FIV04_RS10890 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FIV04_RS10895 PF00700 Bacterial flagellin C-terminal helical region FIV04_RS10895 PF07196 Flagellin hook IN motif FIV04_RS10895 PF00669 Bacterial flagellin N-terminal helical region FIV04_RS10900 PF07196 Flagellin hook IN motif FIV04_RS10900 PF00700 Bacterial flagellin C-terminal helical region FIV04_RS10900 PF00669 Bacterial flagellin N-terminal helical region FIV04_RS10905 PF07196 Flagellin hook IN motif FIV04_RS10905 PF00669 Bacterial flagellin N-terminal helical region FIV04_RS10905 PF00700 Bacterial flagellin C-terminal helical region FIV04_RS10910 PF04261 Dyp-type peroxidase family FIV04_RS10915 PF11143 Protein of unknown function (DUF2919) FIV04_RS10935 PF03960 ArsC family FIV04_RS10940 PF01546 Peptidase family M20/M25/M40 FIV04_RS10940 PF07687 Peptidase dimerisation domain FIV04_RS10945 PF02557 D-alanyl-D-alanine carboxypeptidase FIV04_RS10955 PF06804 NlpB/DapX lipoprotein FIV04_RS10960 PF00701 Dihydrodipicolinate synthetase family FIV04_RS10965 PF01842 ACT domain FIV04_RS10970 PF00578 AhpC/TSA family FIV04_RS10975 PF01594 AI-2E family transporter FIV04_RS10985 PF01435 Peptidase family M48 FIV04_RS10985 PF13181 Tetratricopeptide repeat FIV04_RS10990 PF03960 ArsC family FIV04_RS10995 PF03358 NADPH-dependent FMN reductase FIV04_RS11010 PF00860 Permease family FIV04_RS11020 PF02769 AIR synthase related protein, C-terminal domain FIV04_RS11020 PF00586 AIR synthase related protein, N-terminal domain FIV04_RS11025 PF00551 Formyl transferase FIV04_RS11030 PF13230 Glutamine amidotransferases class-II FIV04_RS11035 PF13580 SIS domain FIV04_RS11040 PF09317 Domain of unknown function (DUF1974) FIV04_RS11040 PF02770 Acyl-CoA dehydrogenase, middle domain FIV04_RS11040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV04_RS11040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV04_RS11050 PF00929 Exonuclease FIV04_RS11055 PF00075 RNase H FIV04_RS11060 PF08241 Methyltransferase domain FIV04_RS11065 PF00753 Metallo-beta-lactamase superfamily FIV04_RS11065 PF16123 Hydroxyacylglutathione hydrolase C-terminus FIV04_RS11070 PF01464 Transglycosylase SLT domain FIV04_RS11070 PF01476 LysM domain FIV04_RS11085 PF00543 Nitrogen regulatory protein P-II FIV04_RS11090 PF00034 Cytochrome c FIV04_RS11095 PF11734 TilS substrate C-terminal domain FIV04_RS11095 PF01171 PP-loop family FIV04_RS11095 PF09179 TilS substrate binding domain FIV04_RS11100 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FIV04_RS11105 PF02811 PHP domain FIV04_RS11105 PF01336 OB-fold nucleic acid binding domain FIV04_RS11105 PF07733 Bacterial DNA polymerase III alpha NTPase domain FIV04_RS11105 PF14579 Helix-hairpin-helix motif FIV04_RS11105 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FIV04_RS11110 PF01351 Ribonuclease HII FIV04_RS11115 PF02684 Lipid-A-disaccharide synthetase FIV04_RS11120 PF00132 Bacterial transferase hexapeptide (six repeats) FIV04_RS11120 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FIV04_RS11125 PF07977 FabA-like domain FIV04_RS11130 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FIV04_RS11130 PF00132 Bacterial transferase hexapeptide (six repeats) FIV04_RS11135 PF03938 Outer membrane protein (OmpH-like) FIV04_RS11140 PF01103 Surface antigen FIV04_RS11140 PF07244 Surface antigen variable number repeat FIV04_RS11145 PF17820 PDZ domain FIV04_RS11145 PF02163 Peptidase family M50 FIV04_RS11150 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FIV04_RS11150 PF13288 DXP reductoisomerase C-terminal domain FIV04_RS11150 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FIV04_RS11160 PF01255 Putative undecaprenyl diphosphate synthase FIV04_RS11165 PF01765 Ribosome recycling factor FIV04_RS11170 PF00696 Amino acid kinase family FIV04_RS11175 PF00889 Elongation factor TS FIV04_RS11180 PF00318 Ribosomal protein S2 FIV04_RS11185 PF00557 Metallopeptidase family M24 FIV04_RS11190 PF01966 HD domain FIV04_RS11190 PF01909 Nucleotidyltransferase domain FIV04_RS11190 PF01842 ACT domain FIV04_RS11190 PF08335 GlnD PII-uridylyltransferase FIV04_RS11195 PF11944 Protein of unknown function (DUF3461) FIV04_RS11200 PF00849 RNA pseudouridylate synthase FIV04_RS11205 PF04287 tRNA pseudouridine synthase C FIV04_RS11230 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FIV04_RS11240 PF03806 AbgT putative transporter family FIV04_RS11245 PF00444 Ribosomal protein L36 FIV04_RS11250 PF01197 Ribosomal protein L31 FIV04_RS11255 PF18389 TrmO C-terminal domain FIV04_RS11255 PF01980 tRNA-methyltransferase O FIV04_RS11260 PF04073 Aminoacyl-tRNA editing domain FIV04_RS11260 PF03129 Anticodon binding domain FIV04_RS11260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FIV04_RS11270 PF06786 Uncharacterised protein family (UPF0253) FIV04_RS11285 PF00464 Serine hydroxymethyltransferase FIV04_RS11290 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FIV04_RS11290 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FIV04_RS11305 PF00128 Alpha amylase, catalytic domain FIV04_RS11305 PF16657 Maltogenic Amylase, C-terminal domain FIV04_RS11310 PF02378 Phosphotransferase system, EIIC FIV04_RS11310 PF00367 phosphotransferase system, EIIB FIV04_RS11315 PF00356 Bacterial regulatory proteins, lacI family FIV04_RS11330 PF09383 NIL domain FIV04_RS11330 PF00005 ABC transporter FIV04_RS11335 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS11340 PF03180 NLPA lipoprotein FIV04_RS11345 PF02264 LamB porin FIV04_RS11350 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) FIV04_RS11355 PF07348 Syd protein (SUKH-2) FIV04_RS11360 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FIV04_RS11360 PF14489 QueF-like protein FIV04_RS11370 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS11375 PF11892 Domain of unknown function (DUF3412) FIV04_RS11375 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FIV04_RS11375 PF03641 Possible lysine decarboxylase FIV04_RS11380 PF01367 5'-3' exonuclease, C-terminal SAM fold FIV04_RS11380 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FIV04_RS11385 PF01223 DNA/RNA non-specific endonuclease FIV04_RS11390 PF18125 RlmM ferredoxin-like domain FIV04_RS11390 PF01728 FtsJ-like methyltransferase FIV04_RS11395 PF04241 Protein of unknown function (DUF423) FIV04_RS11405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS11405 PF03466 LysR substrate binding domain FIV04_RS11410 PF02798 Glutathione S-transferase, N-terminal domain FIV04_RS11415 PF02568 Thiamine biosynthesis protein (ThiI) FIV04_RS11415 PF02926 THUMP domain FIV04_RS11420 PF13677 Membrane MotB of proton-channel complex MotA/MotB FIV04_RS11420 PF00691 OmpA family FIV04_RS11425 PF01618 MotA/TolQ/ExbB proton channel family FIV04_RS11430 PF02609 Exonuclease VII small subunit FIV04_RS11435 PF00348 Polyprenyl synthetase FIV04_RS11440 PF02780 Transketolase, C-terminal domain FIV04_RS11440 PF02779 Transketolase, pyrimidine binding domain FIV04_RS11440 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FIV04_RS11450 PF04608 Phosphatidylglycerophosphatase A FIV04_RS11455 PF02769 AIR synthase related protein, C-terminal domain FIV04_RS11455 PF00586 AIR synthase related protein, N-terminal domain FIV04_RS11460 PF01029 NusB family FIV04_RS11465 PF00885 6,7-dimethyl-8-ribityllumazine synthase FIV04_RS11470 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FIV04_RS11470 PF00925 GTP cyclohydrolase II FIV04_RS11475 PF00677 Lumazine binding domain FIV04_RS11480 PF01872 RibD C-terminal domain FIV04_RS11480 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FIV04_RS11485 PF03477 ATP cone domain FIV04_RS11490 PF00171 Aldehyde dehydrogenase family FIV04_RS11495 PF00696 Amino acid kinase family FIV04_RS11495 PF01472 PUA domain FIV04_RS11500 PF07417 Sigma factor-binding transcriptional regulator Crl FIV04_RS11505 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) FIV04_RS11510 PF00156 Phosphoribosyl transferase domain FIV04_RS11515 PF00860 Permease family FIV04_RS11520 PF07687 Peptidase dimerisation domain FIV04_RS11520 PF01546 Peptidase family M20/M25/M40 FIV04_RS11540 PF00962 Adenosine/AMP deaminase FIV04_RS11555 PF01588 Putative tRNA binding domain FIV04_RS11560 PF00356 Bacterial regulatory proteins, lacI family FIV04_RS11565 PF01263 Aldose 1-epimerase FIV04_RS11570 PF00288 GHMP kinases N terminal domain FIV04_RS11570 PF08544 GHMP kinases C terminal FIV04_RS11570 PF10509 Galactokinase galactose-binding signature FIV04_RS11575 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FIV04_RS11575 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FIV04_RS11580 PF16363 GDP-mannose 4,6 dehydratase FIV04_RS11585 PF00356 Bacterial regulatory proteins, lacI family FIV04_RS11590 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FIV04_RS11590 PF16353 Domain of unknown function(DUF4981) FIV04_RS11590 PF02929 Beta galactosidase small chain FIV04_RS11590 PF00703 Glycosyl hydrolases family 2 FIV04_RS11590 PF02837 Glycosyl hydrolases family 2, sugar binding domain FIV04_RS11595 PF04074 YhcH/YjgK/YiaL FIV04_RS11600 PF13520 Amino acid permease FIV04_RS11605 PF13520 Amino acid permease FIV04_RS11615 PF01204 Trehalase FIV04_RS11620 PF02837 Glycosyl hydrolases family 2, sugar binding domain FIV04_RS11620 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FIV04_RS11620 PF00703 Glycosyl hydrolases family 2 FIV04_RS11620 PF16353 Domain of unknown function(DUF4981) FIV04_RS11620 PF02929 Beta galactosidase small chain FIV04_RS11630 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS11635 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS11640 PF17912 MalK OB fold domain FIV04_RS11640 PF00005 ABC transporter FIV04_RS11645 PF01554 MatE FIV04_RS11650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS11650 PF03466 LysR substrate binding domain FIV04_RS11655 PF02417 Chromate transporter FIV04_RS11695 PF00437 Type II/IV secretion system protein FIV04_RS11710 PF04972 BON domain FIV04_RS11710 PF00263 Bacterial type II and III secretion system protein FIV04_RS11710 PF13629 Pilus formation protein N terminal region FIV04_RS11730 PF12833 Helix-turn-helix domain FIV04_RS11730 PF02311 AraC-like ligand binding domain FIV04_RS11735 PF00501 AMP-binding enzyme FIV04_RS11745 PF03466 LysR substrate binding domain FIV04_RS11745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS11755 PF14492 Elongation Factor G, domain II FIV04_RS11755 PF03144 Elongation factor Tu domain 2 FIV04_RS11755 PF00009 Elongation factor Tu GTP binding domain FIV04_RS11755 PF03764 Elongation factor G, domain IV FIV04_RS11755 PF00679 Elongation factor G C-terminus FIV04_RS11760 PF18073 Rubredoxin metal binding domain FIV04_RS11770 PF18429 Domain of unknown function (DUF5609) FIV04_RS11780 PF01048 Phosphorylase superfamily FIV04_RS11785 PF01676 Metalloenzyme superfamily FIV04_RS11790 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FIV04_RS11790 PF00591 Glycosyl transferase family, a/b domain FIV04_RS11790 PF02885 Glycosyl transferase family, helical bundle domain FIV04_RS11795 PF01791 DeoC/LacD family aldolase FIV04_RS11800 PF07670 Nucleoside recognition FIV04_RS11800 PF01773 Na+ dependent nucleoside transporter N-terminus FIV04_RS11800 PF07662 Na+ dependent nucleoside transporter C-terminus FIV04_RS11805 PF01026 TatD related DNase FIV04_RS11810 PF00009 Elongation factor Tu GTP binding domain FIV04_RS11810 PF03144 Elongation factor Tu domain 2 FIV04_RS11810 PF16658 Class II release factor RF3, C-terminal domain FIV04_RS11815 PF00563 EAL domain FIV04_RS11815 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS11815 PF03707 Bacterial signalling protein N terminal repeat FIV04_RS11820 PF12849 PBP superfamily domain FIV04_RS11825 PF00583 Acetyltransferase (GNAT) family FIV04_RS11835 PF13508 Acetyltransferase (GNAT) domain FIV04_RS11840 PF02036 SCP-2 sterol transfer family FIV04_RS11845 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS11845 PF00563 EAL domain FIV04_RS11845 PF03707 Bacterial signalling protein N terminal repeat FIV04_RS11850 PF01136 Peptidase family U32 FIV04_RS11855 PF01136 Peptidase family U32 FIV04_RS11860 PF01554 MatE FIV04_RS11870 PF13181 Tetratricopeptide repeat FIV04_RS11870 PF07719 Tetratricopeptide repeat FIV04_RS11875 PF00575 S1 RNA binding domain FIV04_RS11875 PF03725 3' exoribonuclease family, domain 2 FIV04_RS11875 PF01138 3' exoribonuclease family, domain 1 FIV04_RS11875 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FIV04_RS11875 PF00013 KH domain FIV04_RS11880 PF00312 Ribosomal protein S15 FIV04_RS11885 PF01509 TruB family pseudouridylate synthase (N terminal domain) FIV04_RS11885 PF16198 tRNA pseudouridylate synthase B C-terminal domain FIV04_RS11885 PF09157 Pseudouridine synthase II TruB, C-terminal FIV04_RS11890 PF02033 Ribosome-binding factor A FIV04_RS11895 PF11987 Translation-initiation factor 2 FIV04_RS11895 PF00009 Elongation factor Tu GTP binding domain FIV04_RS11895 PF08364 Bacterial translation initiation factor IF-2 associated region FIV04_RS11895 PF04760 Translation initiation factor IF-2, N-terminal region FIV04_RS11900 PF08529 NusA N-terminal domain FIV04_RS11900 PF00575 S1 RNA binding domain FIV04_RS11900 PF13184 NusA-like KH domain FIV04_RS11905 PF17384 RimP C-terminal SH3 domain FIV04_RS11905 PF02576 RimP N-terminal domain FIV04_RS11920 PF03840 Preprotein translocase SecG subunit FIV04_RS11925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FIV04_RS11925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FIV04_RS11925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FIV04_RS11925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FIV04_RS11930 PF00809 Pterin binding enzyme FIV04_RS11935 PF17862 AAA+ lid domain FIV04_RS11935 PF01434 Peptidase family M41 FIV04_RS11935 PF00004 ATPase family associated with various cellular activities (AAA) FIV04_RS11935 PF06480 FtsH Extracellular FIV04_RS11940 PF01728 FtsJ-like methyltransferase FIV04_RS11945 PF01985 CRS1 / YhbY (CRM) domain FIV04_RS11950 PF01272 Transcription elongation factor, GreA/GreB, C-term FIV04_RS11950 PF03449 Transcription elongation factor, N-terminal FIV04_RS11955 PF13609 Gram-negative porin FIV04_RS11960 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FIV04_RS11965 PF01769 Divalent cation transporter FIV04_RS11965 PF00571 CBS domain FIV04_RS11965 PF03448 MgtE intracellular N domain FIV04_RS11975 PF00579 tRNA synthetases class I (W and Y) FIV04_RS11980 PF01476 LysM domain FIV04_RS11980 PF08525 Opacity-associated protein A N-terminal motif FIV04_RS11980 PF01551 Peptidase family M23 FIV04_RS11985 PF00873 AcrB/AcrD/AcrF family FIV04_RS11995 PF01521 Iron-sulphur cluster biosynthesis FIV04_RS12000 PF00202 Aminotransferase class-III FIV04_RS12005 PF01594 AI-2E family transporter FIV04_RS12010 PF05175 Methyltransferase small domain FIV04_RS12010 PF08468 Methyltransferase small domain N-terminal FIV04_RS12015 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS12015 PF09308 LuxQ, periplasmic FIV04_RS12015 PF00072 Response regulator receiver domain FIV04_RS12015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS12020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV04_RS12025 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS12030 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV04_RS12030 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS12035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV04_RS12035 PF00005 ABC transporter FIV04_RS12040 PF00005 ABC transporter FIV04_RS12040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV04_RS12050 PF01869 BadF/BadG/BcrA/BcrD ATPase family FIV04_RS12055 PF00728 Glycosyl hydrolase family 20, catalytic domain FIV04_RS12055 PF02838 Glycosyl hydrolase family 20, domain 2 FIV04_RS12060 PF06165 Glycosyltransferase family 36 FIV04_RS12060 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FIV04_RS12065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FIV04_RS12065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FIV04_RS12065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FIV04_RS12065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FIV04_RS12070 PF08402 TOBE domain FIV04_RS12070 PF00005 ABC transporter FIV04_RS12080 PF13416 Bacterial extracellular solute-binding protein FIV04_RS12085 PF00909 Ammonium Transporter Family FIV04_RS12090 PF00543 Nitrogen regulatory protein P-II FIV04_RS12095 PF06062 Uncharacterised protein family (UPF0231) FIV04_RS12100 PF00330 Aconitase family (aconitate hydratase) FIV04_RS12100 PF06434 Aconitate hydratase 2 N-terminus FIV04_RS12100 PF11791 Aconitate B N-terminal domain FIV04_RS12105 PF01734 Patatin-like phospholipase FIV04_RS12110 PF00905 Penicillin binding protein transpeptidase domain FIV04_RS12110 PF00912 Transglycosylase FIV04_RS12110 PF14814 Bifunctional transglycosylase second domain FIV04_RS12115 PF08482 ATP-dependent helicase C-terminal FIV04_RS12115 PF00271 Helicase conserved C-terminal domain FIV04_RS12115 PF04408 Helicase associated domain (HA2) FIV04_RS12115 PF00270 DEAD/DEAH box helicase FIV04_RS12120 PF03749 Sugar fermentation stimulation protein RE domain FIV04_RS12120 PF17746 SfsA N-terminal OB domain FIV04_RS12125 PF01258 Prokaryotic dksA/traR C4-type zinc finger FIV04_RS12130 PF00749 tRNA synthetases class I (E and Q), catalytic domain FIV04_RS12135 PF12627 Probable RNA and SrmB- binding site of polymerase A FIV04_RS12135 PF12626 Polymerase A arginine-rich C-terminus FIV04_RS12135 PF01743 Poly A polymerase head domain FIV04_RS12140 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FIV04_RS12145 PF02548 Ketopantoate hydroxymethyltransferase FIV04_RS12150 PF02569 Pantoate-beta-alanine ligase FIV04_RS12155 PF01061 ABC-2 type transporter FIV04_RS12160 PF00005 ABC transporter FIV04_RS12165 PF01740 STAS domain FIV04_RS12165 PF00916 Sulfate permease family FIV04_RS12170 PF00484 Carbonic anhydrase FIV04_RS12175 PF00156 Phosphoribosyl transferase domain FIV04_RS12180 PF00440 Bacterial regulatory proteins, tetR family FIV04_RS12185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV04_RS12185 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS12190 PF00364 Biotin-requiring enzyme FIV04_RS12190 PF02817 e3 binding domain FIV04_RS12190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FIV04_RS12195 PF00456 Transketolase, thiamine diphosphate binding domain FIV04_RS12195 PF17831 Pyruvate dehydrogenase E1 component middle domain FIV04_RS12200 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS12200 PF07729 FCD domain FIV04_RS12205 PF01510 N-acetylmuramoyl-L-alanine amidase FIV04_RS12215 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FIV04_RS12215 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FIV04_RS12220 PF07963 Prokaryotic N-terminal methylation motif FIV04_RS12220 PF00114 Pilin (bacterial filament) FIV04_RS12225 PF00437 Type II/IV secretion system protein FIV04_RS12225 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FIV04_RS12230 PF00482 Type II secretion system (T2SS), protein F FIV04_RS12235 PF01478 Type IV leader peptidase family FIV04_RS12235 PF06750 Bacterial Peptidase A24 N-terminal domain FIV04_RS12240 PF01121 Dephospho-CoA kinase FIV04_RS12245 PF07072 Cell division protein FIV04_RS12250 PF03884 DNA gyrase inhibitor YacG FIV04_RS12260 PF01245 Ribosomal protein L19 FIV04_RS12265 PF01746 tRNA (Guanine-1)-methyltransferase FIV04_RS12270 PF05239 PRC-barrel domain FIV04_RS12270 PF01782 RimM N-terminal domain FIV04_RS12275 PF00886 Ribosomal protein S16 FIV04_RS12280 PF02978 Signal peptide binding domain FIV04_RS12280 PF02881 SRP54-type protein, helical bundle domain FIV04_RS12280 PF00448 SRP54-type protein, GTPase domain FIV04_RS12285 PF01578 Cytochrome C assembly protein FIV04_RS12290 PF03471 Transporter associated domain FIV04_RS12290 PF00571 CBS domain FIV04_RS12290 PF01595 Cyclin M transmembrane N-terminal domain FIV04_RS12295 PF02664 S-Ribosylhomocysteinase (LuxS) FIV04_RS12305 PF04262 Glutamate-cysteine ligase FIV04_RS12310 PF00675 Insulinase (Peptidase family M16) FIV04_RS12310 PF05193 Peptidase M16 inactive domain FIV04_RS12315 PF09335 SNARE associated Golgi protein FIV04_RS12320 PF00107 Zinc-binding dehydrogenase FIV04_RS12320 PF08240 Alcohol dehydrogenase GroES-like domain FIV04_RS12325 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FIV04_RS12330 PF02436 Conserved carboxylase domain FIV04_RS12330 PF00682 HMGL-like FIV04_RS12330 PF00364 Biotin-requiring enzyme FIV04_RS12335 PF04277 Oxaloacetate decarboxylase, gamma chain FIV04_RS12395 PF02599 Global regulator protein family FIV04_RS12400 PF00696 Amino acid kinase family FIV04_RS12400 PF01842 ACT domain FIV04_RS12400 PF13840 ACT domain FIV04_RS12405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FIV04_RS12405 PF02272 DHHA1 domain FIV04_RS12405 PF01411 tRNA synthetases class II (A) FIV04_RS12410 PF08534 Redoxin FIV04_RS12420 PF00154 recA bacterial DNA recombination protein FIV04_RS12425 PF02464 Competence-damaged protein FIV04_RS12430 PF01624 MutS domain I FIV04_RS12430 PF00488 MutS domain V FIV04_RS12430 PF05188 MutS domain II FIV04_RS12430 PF05192 MutS domain III FIV04_RS12430 PF05190 MutS family domain IV FIV04_RS12435 PF04539 Sigma-70 region 3 FIV04_RS12435 PF04542 Sigma-70 region 2 FIV04_RS12435 PF00140 Sigma-70 factor, region 1.2 FIV04_RS12435 PF04545 Sigma-70, region 4 FIV04_RS12440 PF01476 LysM domain FIV04_RS12440 PF01551 Peptidase family M23 FIV04_RS12450 PF01975 Survival protein SurE FIV04_RS12455 PF01142 tRNA pseudouridine synthase D (TruD) FIV04_RS12460 PF02542 YgbB family FIV04_RS12465 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FIV04_RS12470 PF04977 Septum formation initiator FIV04_RS12475 PF00113 Enolase, C-terminal TIM barrel domain FIV04_RS12475 PF03952 Enolase, N-terminal domain FIV04_RS12480 PF00117 Glutamine amidotransferase class-I FIV04_RS12480 PF06418 CTP synthase N-terminus FIV04_RS12485 PF03819 MazG nucleotide pyrophosphohydrolase domain FIV04_RS12490 PF13291 ACT domain FIV04_RS12490 PF04607 Region found in RelA / SpoT proteins FIV04_RS12490 PF02824 TGS domain FIV04_RS12495 PF01938 TRAM domain FIV04_RS12495 PF05958 tRNA (Uracil-5-)-methyltransferase FIV04_RS12505 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FIV04_RS12505 PF00072 Response regulator receiver domain FIV04_RS12505 PF01627 Hpt domain FIV04_RS12505 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS12505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS12505 PF00672 HAMP domain FIV04_RS12510 PF01648 4'-phosphopantetheinyl transferase superfamily FIV04_RS12515 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FIV04_RS12520 PF11967 Recombination protein O N terminal FIV04_RS12520 PF02565 Recombination protein O C terminal FIV04_RS12525 PF01926 50S ribosome-binding GTPase FIV04_RS12525 PF07650 KH domain FIV04_RS12530 PF00035 Double-stranded RNA binding motif FIV04_RS12530 PF14622 Ribonuclease-III-like FIV04_RS12535 PF10502 Signal peptidase, peptidase S26 FIV04_RS12540 PF03144 Elongation factor Tu domain 2 FIV04_RS12540 PF06421 GTP-binding protein LepA C-terminus FIV04_RS12540 PF00679 Elongation factor G C-terminus FIV04_RS12540 PF00009 Elongation factor Tu GTP binding domain FIV04_RS12550 PF03888 MucB/RseB N-terminal domain FIV04_RS12550 PF17188 MucB/RseB C-terminal domain FIV04_RS12555 PF03873 Anti sigma-E protein RseA, C-terminal domain FIV04_RS12555 PF03872 Anti sigma-E protein RseA, N-terminal domain FIV04_RS12560 PF08281 Sigma-70, region 4 FIV04_RS12560 PF04542 Sigma-70 region 2 FIV04_RS12565 PF02910 Fumarate reductase flavoprotein C-term FIV04_RS12565 PF00890 FAD binding domain FIV04_RS12575 PF03937 Flavinator of succinate dehydrogenase FIV04_RS12585 PF04073 Aminoacyl-tRNA editing domain FIV04_RS12585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FIV04_RS12585 PF03129 Anticodon binding domain FIV04_RS12595 PF01494 FAD binding domain FIV04_RS12600 PF01494 FAD binding domain FIV04_RS12605 PF03695 Uncharacterised protein family (UPF0149) FIV04_RS12610 PF05164 Cell division protein ZapA FIV04_RS12620 PF01812 5-formyltetrahydrofolate cyclo-ligase family FIV04_RS12625 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FIV04_RS12630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIV04_RS12630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIV04_RS12630 PF01842 ACT domain FIV04_RS12640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS12640 PF03466 LysR substrate binding domain FIV04_RS12645 PF01810 LysE type translocator FIV04_RS12650 PF00924 Mechanosensitive ion channel FIV04_RS12650 PF05552 Conserved TM helix FIV04_RS12655 PF01116 Fructose-bisphosphate aldolase class-II FIV04_RS12660 PF00162 Phosphoglycerate kinase FIV04_RS12665 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FIV04_RS12665 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FIV04_RS12675 PF00456 Transketolase, thiamine diphosphate binding domain FIV04_RS12675 PF02779 Transketolase, pyrimidine binding domain FIV04_RS12675 PF02780 Transketolase, C-terminal domain FIV04_RS12680 PF00438 S-adenosylmethionine synthetase, N-terminal domain FIV04_RS12680 PF02772 S-adenosylmethionine synthetase, central domain FIV04_RS12680 PF02773 S-adenosylmethionine synthetase, C-terminal domain FIV04_RS12690 PF17283 SprT-like zinc ribbon domain FIV04_RS12690 PF10263 SprT-like family FIV04_RS12695 PF04231 Endonuclease I FIV04_RS12705 PF04452 RNA methyltransferase FIV04_RS12710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FIV04_RS12710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FIV04_RS12715 PF02622 Uncharacterized ACR, COG1678 FIV04_RS12720 PF03652 Holliday junction resolvase FIV04_RS12725 PF00437 Type II/IV secretion system protein FIV04_RS12730 PF00437 Type II/IV secretion system protein FIV04_RS12735 PF01168 Alanine racemase, N-terminal domain FIV04_RS12740 PF14748 Pyrroline-5-carboxylate reductase dimerisation FIV04_RS12740 PF03807 NADP oxidoreductase coenzyme F420-dependent FIV04_RS12745 PF02325 YGGT family FIV04_RS12750 PF02594 Uncharacterised ACR, YggU family COG1872 FIV04_RS12760 PF01725 Ham1 family FIV04_RS12765 PF04055 Radical SAM superfamily FIV04_RS12765 PF06969 HemN C-terminal domain FIV04_RS12770 PF04960 Glutaminase FIV04_RS12775 PF02390 Putative methyltransferase FIV04_RS12780 PF00633 Helix-hairpin-helix motif FIV04_RS12780 PF14815 NUDIX domain FIV04_RS12780 PF00730 HhH-GPD superfamily base excision DNA repair protein FIV04_RS12785 PF04362 Bacterial Fe(2+) trafficking FIV04_RS12790 PF01464 Transglycosylase SLT domain FIV04_RS12790 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FIV04_RS12830 PF17200 Single Cache domain 2 FIV04_RS12830 PF00672 HAMP domain FIV04_RS12830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS12900 PF00072 Response regulator receiver domain FIV04_RS12910 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS12910 PF05230 MASE2 domain FIV04_RS12915 PF00072 Response regulator receiver domain FIV04_RS12915 PF08769 Sporulation initiation factor Spo0A C terminal FIV04_RS12925 PF16655 PhoD-like phosphatase, N-terminal domain FIV04_RS12925 PF09423 PhoD-like phosphatase FIV04_RS12940 PF03739 Lipopolysaccharide export system permease LptF/LptG FIV04_RS12945 PF03739 Lipopolysaccharide export system permease LptF/LptG FIV04_RS12950 PF02789 Cytosol aminopeptidase family, N-terminal domain FIV04_RS12950 PF00883 Cytosol aminopeptidase family, catalytic domain FIV04_RS12955 PF04364 DNA polymerase III chi subunit, HolC FIV04_RS12960 PF10458 Valyl tRNA synthetase tRNA binding arm FIV04_RS12960 PF00133 tRNA synthetases class I (I, L, M and V) FIV04_RS12960 PF08264 Anticodon-binding domain of tRNA FIV04_RS12965 PF07720 Tetratricopeptide repeat FIV04_RS12965 PF01435 Peptidase family M48 FIV04_RS12970 PF05987 Bacterial protein of unknown function (DUF898) FIV04_RS12980 PF00583 Acetyltransferase (GNAT) family FIV04_RS12990 PF06877 Regulator of ribonuclease activity B FIV04_RS13000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FIV04_RS13000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FIV04_RS13005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FIV04_RS13005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FIV04_RS13010 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain FIV04_RS13010 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain FIV04_RS13015 PF01042 Endoribonuclease L-PSP FIV04_RS13020 PF01553 Acyltransferase FIV04_RS13025 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FIV04_RS13030 PF01722 BolA-like protein FIV04_RS13040 PF05494 MlaC protein FIV04_RS13045 PF02470 MlaD protein FIV04_RS13055 PF01699 Sodium/calcium exchanger protein FIV04_RS13060 PF00571 CBS domain FIV04_RS13060 PF01380 SIS domain FIV04_RS13075 PF03968 OstA-like protein FIV04_RS13080 PF00005 ABC transporter FIV04_RS13080 PF12399 Branched-chain amino acid ATP-binding cassette transporter FIV04_RS13085 PF00309 Sigma-54 factor, Activator interacting domain (AID) FIV04_RS13085 PF04552 Sigma-54, DNA binding domain FIV04_RS13085 PF04963 Sigma-54 factor, core binding domain FIV04_RS13090 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FIV04_RS13095 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FIV04_RS13100 PF03668 P-loop ATPase protein family FIV04_RS13105 PF00381 PTS HPr component phosphorylation site FIV04_RS13110 PF01769 Divalent cation transporter FIV04_RS13110 PF00571 CBS domain FIV04_RS13110 PF03448 MgtE intracellular N domain FIV04_RS13115 PF01523 Putative modulator of DNA gyrase FIV04_RS13120 PF04751 Protein of unknown function (DUF615) FIV04_RS13125 PF00005 ABC transporter FIV04_RS13130 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS13140 PF02441 Flavoprotein FIV04_RS13145 PF01225 Mur ligase family, catalytic domain FIV04_RS13145 PF08245 Mur ligase middle domain FIV04_RS13145 PF02875 Mur ligase family, glutamate ligase domain FIV04_RS13150 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FIV04_RS13160 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like FIV04_RS13165 PF04357 TamB, inner membrane protein subunit of TAM complex FIV04_RS13170 PF01103 Surface antigen FIV04_RS13170 PF07244 Surface antigen variable number repeat FIV04_RS13170 PF17243 POTRA domain TamA domain 1 FIV04_RS13175 PF01625 Peptide methionine sulfoxide reductase FIV04_RS13180 PF06526 Protein of unknown function (DUF1107) FIV04_RS13185 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FIV04_RS13200 PF00005 ABC transporter FIV04_RS13225 PF02080 TrkA-C domain FIV04_RS13225 PF03600 Citrate transporter FIV04_RS13230 PF00009 Elongation factor Tu GTP binding domain FIV04_RS13235 PF01507 Phosphoadenosine phosphosulfate reductase family FIV04_RS13240 PF02872 5'-nucleotidase, C-terminal domain FIV04_RS13240 PF00149 Calcineurin-like phosphoesterase FIV04_RS13250 PF02875 Mur ligase family, glutamate ligase domain FIV04_RS13250 PF08245 Mur ligase middle domain FIV04_RS13250 PF08443 RimK-like ATP-grasp domain FIV04_RS13285 PF13673 Acetyltransferase (GNAT) domain FIV04_RS13295 PF04225 Opacity-associated protein A LysM-like domain FIV04_RS13295 PF08525 Opacity-associated protein A N-terminal motif FIV04_RS13300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIV04_RS13300 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FIV04_RS13310 PF01196 Ribosomal protein L17 FIV04_RS13315 PF01000 RNA polymerase Rpb3/RpoA insert domain FIV04_RS13315 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FIV04_RS13315 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FIV04_RS13320 PF01479 S4 domain FIV04_RS13320 PF00163 Ribosomal protein S4/S9 N-terminal domain FIV04_RS13325 PF00411 Ribosomal protein S11 FIV04_RS13330 PF00416 Ribosomal protein S13/S18 FIV04_RS13335 PF00444 Ribosomal protein L36 FIV04_RS13340 PF00344 SecY translocase FIV04_RS13345 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FIV04_RS13350 PF00327 Ribosomal protein L30p/L7e FIV04_RS13355 PF00333 Ribosomal protein S5, N-terminal domain FIV04_RS13355 PF03719 Ribosomal protein S5, C-terminal domain FIV04_RS13360 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FIV04_RS13365 PF00347 Ribosomal protein L6 FIV04_RS13370 PF00410 Ribosomal protein S8 FIV04_RS13375 PF00253 Ribosomal protein S14p/S29e FIV04_RS13380 PF00281 Ribosomal protein L5 FIV04_RS13380 PF00673 ribosomal L5P family C-terminus FIV04_RS13385 PF00467 KOW motif FIV04_RS13385 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FIV04_RS13390 PF00238 Ribosomal protein L14p/L23e FIV04_RS13395 PF00366 Ribosomal protein S17 FIV04_RS13400 PF00831 Ribosomal L29 protein FIV04_RS13405 PF00252 Ribosomal protein L16p/L10e FIV04_RS13410 PF07650 KH domain FIV04_RS13410 PF00189 Ribosomal protein S3, C-terminal domain FIV04_RS13415 PF00237 Ribosomal protein L22p/L17e FIV04_RS13420 PF00203 Ribosomal protein S19 FIV04_RS13425 PF00181 Ribosomal Proteins L2, RNA binding domain FIV04_RS13425 PF03947 Ribosomal Proteins L2, C-terminal domain FIV04_RS13430 PF00276 Ribosomal protein L23 FIV04_RS13435 PF00573 Ribosomal protein L4/L1 family FIV04_RS13440 PF00297 Ribosomal protein L3 FIV04_RS13445 PF00338 Ribosomal protein S10p/S20e FIV04_RS13450 PF00210 Ferritin-like domain FIV04_RS13455 PF04324 BFD-like [2Fe-2S] binding domain FIV04_RS13460 PF03143 Elongation factor Tu C-terminal domain FIV04_RS13460 PF03144 Elongation factor Tu domain 2 FIV04_RS13460 PF00009 Elongation factor Tu GTP binding domain FIV04_RS13465 PF03144 Elongation factor Tu domain 2 FIV04_RS13465 PF00009 Elongation factor Tu GTP binding domain FIV04_RS13465 PF03764 Elongation factor G, domain IV FIV04_RS13465 PF14492 Elongation Factor G, domain II FIV04_RS13465 PF00679 Elongation factor G C-terminus FIV04_RS13470 PF00177 Ribosomal protein S7p/S5e FIV04_RS13475 PF00164 Ribosomal protein S12/S23 FIV04_RS13485 PF02635 DsrE/DsrF-like family FIV04_RS13490 PF02635 DsrE/DsrF-like family FIV04_RS13495 PF08348 YheO-like PAS domain FIV04_RS13495 PF13309 HTH domain FIV04_RS13500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIV04_RS13500 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FIV04_RS13510 PF04102 SlyX FIV04_RS13515 PF01112 Asparaginase FIV04_RS13520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIV04_RS13530 PF02254 TrkA-N domain FIV04_RS13530 PF00999 Sodium/hydrogen exchanger family FIV04_RS13535 PF02525 Flavodoxin-like fold FIV04_RS13540 PF00005 ABC transporter FIV04_RS13540 PF12848 ABC transporter FIV04_RS13550 PF00561 alpha/beta hydrolase fold FIV04_RS13555 PF06794 Uncharacterised protein family (UPF0270) FIV04_RS13560 PF00485 Phosphoribulokinase / Uridine kinase family FIV04_RS13565 PF13545 Crp-like helix-turn-helix domain FIV04_RS13565 PF00027 Cyclic nucleotide-binding domain FIV04_RS13575 PF00171 Aldehyde dehydrogenase family FIV04_RS13580 PF04958 Arginine N-succinyltransferase beta subunit FIV04_RS13585 PF00202 Aminotransferase class-III FIV04_RS13590 PF00117 Glutamine amidotransferase class-I FIV04_RS13595 PF04231 Endonuclease I FIV04_RS13615 PF00579 tRNA synthetases class I (W and Y) FIV04_RS13620 PF13419 Haloacid dehalogenase-like hydrolase FIV04_RS13625 PF00834 Ribulose-phosphate 3 epimerase family FIV04_RS13630 PF02086 D12 class N6 adenine-specific DNA methyltransferase FIV04_RS13640 PF01761 3-dehydroquinate synthase FIV04_RS13645 PF01202 Shikimate kinase FIV04_RS13650 PF11741 AMIN domain FIV04_RS13650 PF00263 Bacterial type II and III secretion system protein FIV04_RS13650 PF03958 Bacterial type II/III secretion system short domain FIV04_RS13650 PF07660 Secretin and TonB N terminus short domain FIV04_RS13675 PF17092 Penicillin-binding protein OB-like domain FIV04_RS13675 PF00912 Transglycosylase FIV04_RS13675 PF00905 Penicillin binding protein transpeptidase domain FIV04_RS13680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS13680 PF03466 LysR substrate binding domain FIV04_RS13685 PF00462 Glutaredoxin FIV04_RS13685 PF08534 Redoxin FIV04_RS13690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV04_RS13690 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS13695 PF01042 Endoribonuclease L-PSP FIV04_RS13705 PF14698 Argininosuccinate lyase C-terminal FIV04_RS13705 PF00206 Lyase FIV04_RS13705 PF00583 Acetyltransferase (GNAT) family FIV04_RS13710 PF00764 Arginosuccinate synthase FIV04_RS13715 PF00696 Amino acid kinase family FIV04_RS13720 PF01118 Semialdehyde dehydrogenase, NAD binding domain FIV04_RS13720 PF02774 Semialdehyde dehydrogenase, dimerisation domain FIV04_RS13725 PF01546 Peptidase family M20/M25/M40 FIV04_RS13725 PF07687 Peptidase dimerisation domain FIV04_RS13730 PF00311 Phosphoenolpyruvate carboxylase FIV04_RS13740 PF02219 Methylenetetrahydrofolate reductase FIV04_RS13745 PF00742 Homoserine dehydrogenase FIV04_RS13745 PF03447 Homoserine dehydrogenase, NAD binding domain FIV04_RS13745 PF00696 Amino acid kinase family FIV04_RS13750 PF01053 Cys/Met metabolism PLP-dependent enzyme FIV04_RS13755 PF01340 Met Apo-repressor, MetJ FIV04_RS13760 PF03949 Malic enzyme, NAD binding domain FIV04_RS13760 PF00390 Malic enzyme, N-terminal domain FIV04_RS13765 PF01197 Ribosomal protein L31 FIV04_RS13770 PF00271 Helicase conserved C-terminal domain FIV04_RS13770 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FIV04_RS13770 PF00270 DEAD/DEAH box helicase FIV04_RS13770 PF17764 3′ DNA-binding domain (3′BD) FIV04_RS13770 PF18074 Primosomal protein N C-terminal domain FIV04_RS13775 PF00356 Bacterial regulatory proteins, lacI family FIV04_RS13785 PF00227 Proteasome subunit FIV04_RS13790 PF07724 AAA domain (Cdc48 subfamily) FIV04_RS13790 PF00004 ATPase family associated with various cellular activities (AAA) FIV04_RS13795 PF01040 UbiA prenyltransferase family FIV04_RS13800 PF03737 Aldolase/RraA FIV04_RS13805 PF06005 Cell division protein ZapB FIV04_RS13810 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FIV04_RS13835 PF00121 Triosephosphate isomerase FIV04_RS13840 PF00365 Phosphofructokinase FIV04_RS13845 PF01545 Cation efflux family FIV04_RS13845 PF16916 Dimerisation domain of Zinc Transporter FIV04_RS13855 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS13855 PF00072 Response regulator receiver domain FIV04_RS13860 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS13860 PF16527 Two-component sensor protein CpxA, periplasmic domain FIV04_RS13860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS13860 PF00672 HAMP domain FIV04_RS13865 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FIV04_RS13865 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FIV04_RS13870 PF00588 SpoU rRNA Methylase family FIV04_RS13875 PF04186 FxsA cytoplasmic membrane protein FIV04_RS13880 PF00206 Lyase FIV04_RS13880 PF10415 Fumarase C C-terminus FIV04_RS13885 PF03605 Anaerobic c4-dicarboxylate membrane transporter FIV04_RS13890 PF11412 Disulphide bond corrector protein DsbC FIV04_RS13890 PF02683 Cytochrome C biogenesis protein transmembrane region FIV04_RS13895 PF00072 Response regulator receiver domain FIV04_RS13895 PF00196 Bacterial regulatory proteins, luxR family FIV04_RS13900 PF01914 MarC family integral membrane protein FIV04_RS13910 PF00474 Sodium:solute symporter family FIV04_RS13920 PF10415 Fumarase C C-terminus FIV04_RS13920 PF00206 Lyase FIV04_RS13925 PF01627 Hpt domain FIV04_RS13925 PF00072 Response regulator receiver domain FIV04_RS13925 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS13925 PF00672 HAMP domain FIV04_RS13925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS13930 PF12832 MFS_1 like family FIV04_RS13945 PF00501 AMP-binding enzyme FIV04_RS13945 PF16177 Acetyl-coenzyme A synthetase N-terminus FIV04_RS13945 PF13193 AMP-binding enzyme C-terminal domain FIV04_RS13950 PF01220 Dehydroquinase class II FIV04_RS13955 PF00364 Biotin-requiring enzyme FIV04_RS13960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FIV04_RS13960 PF00289 Biotin carboxylase, N-terminal domain FIV04_RS13960 PF02785 Biotin carboxylase C-terminal domain FIV04_RS13975 PF01207 Dihydrouridine synthase (Dus) FIV04_RS13980 PF02954 Bacterial regulatory protein, Fis family FIV04_RS13985 PF00376 MerR family regulatory protein FIV04_RS13985 PF09278 MerR, DNA binding FIV04_RS13995 PF02142 MGS-like domain FIV04_RS13995 PF01808 AICARFT/IMPCHase bienzyme FIV04_RS14000 PF02843 Phosphoribosylglycinamide synthetase, C domain FIV04_RS14000 PF02844 Phosphoribosylglycinamide synthetase, N domain FIV04_RS14000 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FIV04_RS14010 PF00216 Bacterial DNA-binding protein FIV04_RS14020 PF04222 Protein of unknown function (DUF416) FIV04_RS14035 PF01208 Uroporphyrinogen decarboxylase (URO-D) FIV04_RS14040 PF09297 NADH pyrophosphatase zinc ribbon domain FIV04_RS14040 PF00293 NUDIX domain FIV04_RS14045 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ FIV04_RS14050 PF05000 RNA polymerase Rpb1, domain 4 FIV04_RS14050 PF04983 RNA polymerase Rpb1, domain 3 FIV04_RS14050 PF04997 RNA polymerase Rpb1, domain 1 FIV04_RS14050 PF04998 RNA polymerase Rpb1, domain 5 FIV04_RS14050 PF00623 RNA polymerase Rpb1, domain 2 FIV04_RS14055 PF04560 RNA polymerase Rpb2, domain 7 FIV04_RS14055 PF04565 RNA polymerase Rpb2, domain 3 FIV04_RS14055 PF04561 RNA polymerase Rpb2, domain 2 FIV04_RS14055 PF04563 RNA polymerase beta subunit FIV04_RS14055 PF10385 RNA polymerase beta subunit external 1 domain FIV04_RS14055 PF00562 RNA polymerase Rpb2, domain 6 FIV04_RS14060 PF16320 Ribosomal protein L7/L12 dimerisation domain FIV04_RS14060 PF00542 Ribosomal protein L7/L12 C-terminal domain FIV04_RS14065 PF00466 Ribosomal protein L10 FIV04_RS14070 PF00687 Ribosomal protein L1p/L10e family FIV04_RS14075 PF03946 Ribosomal protein L11, N-terminal domain FIV04_RS14075 PF00298 Ribosomal protein L11, RNA binding domain FIV04_RS14080 PF00467 KOW motif FIV04_RS14080 PF02357 Transcription termination factor nusG FIV04_RS14085 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FIV04_RS14090 PF03144 Elongation factor Tu domain 2 FIV04_RS14090 PF03143 Elongation factor Tu C-terminal domain FIV04_RS14090 PF00009 Elongation factor Tu GTP binding domain FIV04_RS14115 PF00485 Phosphoribulokinase / Uridine kinase family FIV04_RS14120 PF08279 HTH domain FIV04_RS14120 PF03099 Biotin/lipoate A/B protein ligase family FIV04_RS14120 PF02237 Biotin protein ligase C terminal domain FIV04_RS14125 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FIV04_RS14125 PF01565 FAD binding domain FIV04_RS14135 PF13091 PLD-like domain FIV04_RS14220 PF01177 Asp/Glu/Hydantoin racemase FIV04_RS14225 PF00764 Arginosuccinate synthase FIV04_RS14230 PF07715 TonB-dependent Receptor Plug Domain FIV04_RS14230 PF00593 TonB dependent receptor FIV04_RS14235 PF05958 tRNA (Uracil-5-)-methyltransferase FIV04_RS14245 PF00440 Bacterial regulatory proteins, tetR family FIV04_RS14250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV04_RS14250 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS14255 PF01554 MatE FIV04_RS14265 PF01726 LexA DNA binding domain FIV04_RS14265 PF00717 Peptidase S24-like FIV04_RS14270 PF01553 Acyltransferase FIV04_RS14275 PF01040 UbiA prenyltransferase family FIV04_RS14280 PF04345 Chorismate lyase FIV04_RS14285 PF03748 Flagellar basal body-associated protein FliL FIV04_RS14290 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FIV04_RS14290 PF01694 Rhomboid family FIV04_RS14295 PF00581 Rhodanese-like domain FIV04_RS14300 PF00140 Sigma-70 factor, region 1.2 FIV04_RS14300 PF04542 Sigma-70 region 2 FIV04_RS14300 PF04545 Sigma-70, region 4 FIV04_RS14305 PF18075 FtsX extracellular domain FIV04_RS14310 PF00005 ABC transporter FIV04_RS14315 PF02881 SRP54-type protein, helical bundle domain FIV04_RS14315 PF00448 SRP54-type protein, GTPase domain FIV04_RS14330 PF01914 MarC family integral membrane protein FIV04_RS14375 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FIV04_RS14375 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FIV04_RS14380 PF01022 Bacterial regulatory protein, arsR family FIV04_RS14385 PF00563 EAL domain FIV04_RS14385 PF08668 HDOD domain FIV04_RS14390 PF01810 LysE type translocator FIV04_RS14415 PF03942 DTW domain FIV04_RS14420 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS14420 PF10442 FIST C domain FIV04_RS14420 PF00563 EAL domain FIV04_RS14420 PF08495 FIST N domain FIV04_RS14425 PF08495 FIST N domain FIV04_RS14425 PF00563 EAL domain FIV04_RS14425 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS14425 PF10442 FIST C domain FIV04_RS14430 PF13419 Haloacid dehalogenase-like hydrolase FIV04_RS14435 PF02899 Phage integrase, N-terminal SAM-like domain FIV04_RS14435 PF00589 Phage integrase family FIV04_RS14445 PF01678 Diaminopimelate epimerase FIV04_RS14450 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FIV04_RS14450 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FIV04_RS14460 PF01491 Frataxin-like domain FIV04_RS14465 PF12633 Adenylate cyclase NT domain FIV04_RS14465 PF01295 Adenylate cyclase, class-I FIV04_RS14470 PF03900 Porphobilinogen deaminase, C-terminal domain FIV04_RS14470 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FIV04_RS14475 PF02602 Uroporphyrinogen-III synthase HemD FIV04_RS14480 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FIV04_RS14485 PF07219 HemY protein N-terminus FIV04_RS14540 PF00175 Oxidoreductase NAD-binding domain FIV04_RS14550 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FIV04_RS14560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV04_RS14560 PF07498 Rho termination factor, N-terminal domain FIV04_RS14560 PF07497 Rho termination factor, RNA-binding domain FIV04_RS14565 PF00085 Thioredoxin FIV04_RS14570 PF00270 DEAD/DEAH box helicase FIV04_RS14570 PF00271 Helicase conserved C-terminal domain FIV04_RS14575 PF02541 Ppx/GppA phosphatase family FIV04_RS14580 PF02592 Putative vitamin uptake transporter FIV04_RS14590 PF09382 RQC domain FIV04_RS14590 PF00570 HRDC domain FIV04_RS14590 PF00271 Helicase conserved C-terminal domain FIV04_RS14590 PF16124 RecQ zinc-binding FIV04_RS14590 PF00270 DEAD/DEAH box helicase FIV04_RS14595 PF00892 EamA-like transporter family FIV04_RS14600 PF12833 Helix-turn-helix domain FIV04_RS14600 PF02311 AraC-like ligand binding domain FIV04_RS14605 PF01810 LysE type translocator FIV04_RS14620 PF13361 UvrD-like helicase C-terminal domain FIV04_RS14620 PF00580 UvrD/REP helicase N-terminal domain FIV04_RS14630 PF05114 Protein of unknown function (DUF692) FIV04_RS14650 PF07690 Major Facilitator Superfamily FIV04_RS14655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS14655 PF03466 LysR substrate binding domain FIV04_RS14660 PF00557 Metallopeptidase family M24 FIV04_RS14660 PF01321 Creatinase/Prolidase N-terminal domain FIV04_RS14660 PF00557 Metallopeptidase family M24 FIV04_RS14660 PF01321 Creatinase/Prolidase N-terminal domain FIV04_RS14665 PF04055 Radical SAM superfamily FIV04_RS14665 PF06968 Biotin and Thiamin Synthesis associated domain FIV04_RS14670 PF05690 Thiazole biosynthesis protein ThiG FIV04_RS14680 PF00899 ThiF family FIV04_RS14685 PF02581 Thiamine monophosphate synthase FIV04_RS14690 PF13667 ThiC-associated domain FIV04_RS14690 PF01964 Radical SAM ThiC family FIV04_RS14695 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FIV04_RS14700 PF10518 TAT (twin-arginine translocation) pathway signal sequence FIV04_RS14700 PF07731 Multicopper oxidase FIV04_RS14700 PF00394 Multicopper oxidase FIV04_RS14700 PF07732 Multicopper oxidase FIV04_RS14705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS14705 PF00672 HAMP domain FIV04_RS14705 PF02743 Cache domain FIV04_RS14755 PF00132 Bacterial transferase hexapeptide (six repeats) FIV04_RS14760 PF07369 Protein of unknown function (DUF1488) FIV04_RS14765 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FIV04_RS14765 PF01488 Shikimate / quinate 5-dehydrogenase FIV04_RS14765 PF08501 Shikimate dehydrogenase substrate binding domain FIV04_RS14770 PF01218 Coproporphyrinogen III oxidase FIV04_RS14775 PF01300 Telomere recombination FIV04_RS14780 PF00731 AIR carboxylase FIV04_RS14785 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FIV04_RS14785 PF02222 ATP-grasp domain FIV04_RS14790 PF01396 Topoisomerase DNA binding C4 zinc finger FIV04_RS14795 PF04361 Protein of unknown function (DUF494) FIV04_RS14800 PF02481 DNA recombination-mediator protein A FIV04_RS14800 PF17782 DprA winged helix domain FIV04_RS14810 PF01327 Polypeptide deformylase FIV04_RS14815 PF00551 Formyl transferase FIV04_RS14815 PF02911 Formyl transferase, C-terminal domain FIV04_RS14820 PF01029 NusB family FIV04_RS14820 PF01189 16S rRNA methyltransferase RsmB/F FIV04_RS14825 PF02080 TrkA-C domain FIV04_RS14825 PF02254 TrkA-N domain FIV04_RS14830 PF02386 Cation transport protein FIV04_RS14840 PF03006 Haemolysin-III related FIV04_RS14845 PF07070 SpoOM protein FIV04_RS14850 PF06288 Protein of unknown function (DUF1040) FIV04_RS14855 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FIV04_RS14855 PF12801 4Fe-4S binding domain FIV04_RS14855 PF13746 4Fe-4S dicluster domain FIV04_RS14860 PF01636 Phosphotransferase enzyme family FIV04_RS14865 PF01323 DSBA-like thioredoxin domain FIV04_RS14915 PF13335 Magnesium chelatase, subunit ChlI C-terminal FIV04_RS14915 PF01078 Magnesium chelatase, subunit ChlI FIV04_RS14920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIV04_RS14920 PF00205 Thiamine pyrophosphate enzyme, central domain FIV04_RS14920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIV04_RS14930 PF01063 Amino-transferase class IV FIV04_RS14935 PF00920 Dehydratase family FIV04_RS14940 PF00585 C-terminal regulatory domain of Threonine dehydratase FIV04_RS14940 PF00291 Pyridoxal-phosphate dependent enzyme FIV04_RS14945 PF03466 LysR substrate binding domain FIV04_RS14945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS14950 PF07690 Major Facilitator Superfamily FIV04_RS14955 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS14960 PF00132 Bacterial transferase hexapeptide (six repeats) FIV04_RS14960 PF12804 MobA-like NTP transferase domain FIV04_RS14965 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FIV04_RS14965 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FIV04_RS14970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV04_RS14970 PF02874 ATP synthase alpha/beta family, beta-barrel domain FIV04_RS14975 PF00231 ATP synthase FIV04_RS14980 PF00306 ATP synthase alpha/beta chain, C terminal domain FIV04_RS14980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV04_RS14980 PF02874 ATP synthase alpha/beta family, beta-barrel domain FIV04_RS14985 PF00213 ATP synthase delta (OSCP) subunit FIV04_RS14990 PF00430 ATP synthase B/B' CF(0) FIV04_RS14995 PF00137 ATP synthase subunit C FIV04_RS15000 PF00119 ATP synthase A chain FIV04_RS15005 PF03899 ATP synthase I chain FIV04_RS15010 PF02195 ParB-like nuclease domain FIV04_RS15010 PF17762 HTH domain found in ParB protein FIV04_RS15015 PF13614 AAA domain FIV04_RS15020 PF02527 rRNA small subunit methyltransferase G FIV04_RS15025 PF01134 Glucose inhibited division protein A FIV04_RS15025 PF13932 GidA associated domain FIV04_RS15030 PF00258 Flavodoxin FIV04_RS15035 PF10396 GTP-binding protein TrmE N-terminus FIV04_RS15035 PF12631 MnmE helical domain FIV04_RS15035 PF01926 50S ribosome-binding GTPase FIV04_RS15040 PF14849 YidC periplasmic domain FIV04_RS15040 PF02096 60Kd inner membrane protein FIV04_RS15045 PF01809 Putative membrane protein insertion efficiency factor FIV04_RS15050 PF00825 Ribonuclease P FIV04_RS15055 PF00468 Ribosomal protein L34 FIV04_RS15060 PF00005 ABC transporter FIV04_RS15065 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS15070 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV04_RS15085 PF16220 Domain of unknown function (DUF4880) FIV04_RS15085 PF04773 FecR protein FIV04_RS15120 PF01618 MotA/TolQ/ExbB proton channel family FIV04_RS15125 PF02472 Biopolymer transport protein ExbD/TolR FIV04_RS15130 PF03544 Gram-negative bacterial TonB protein C-terminal FIV04_RS15135 PF01565 FAD binding domain FIV04_RS15135 PF09330 D-lactate dehydrogenase, membrane binding FIV04_RS15140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS15140 PF03466 LysR substrate binding domain FIV04_RS15175 PF02322 Cytochrome bd terminal oxidase subunit II FIV04_RS15180 PF01654 Cytochrome bd terminal oxidase subunit I FIV04_RS15185 PF00155 Aminotransferase class I and II FIV04_RS15185 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS15190 PF00672 HAMP domain FIV04_RS15190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS15210 PF05762 VWA domain containing CoxE-like protein FIV04_RS15215 PF12592 Protein of unknown function (DUF3763) FIV04_RS15215 PF17868 AAA lid domain FIV04_RS15215 PF07728 AAA domain (dynein-related subfamily) FIV04_RS15220 PF00293 NUDIX domain FIV04_RS15225 PF01212 Beta-eliminating lyase FIV04_RS15230 PF01926 50S ribosome-binding GTPase FIV04_RS15235 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS15240 PF00814 Glycoprotease family FIV04_RS15240 PF00583 Acetyltransferase (GNAT) family FIV04_RS15260 PF01238 Phosphomannose isomerase type I FIV04_RS15265 PF02595 Glycerate kinase family FIV04_RS15270 PF07748 Glycosyl hydrolases family 38 C-terminal domain FIV04_RS15270 PF01074 Glycosyl hydrolases family 38 N-terminal domain FIV04_RS15270 PF09261 Alpha mannosidase middle domain FIV04_RS15275 PF02378 Phosphotransferase system, EIIC FIV04_RS15275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FIV04_RS15275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FIV04_RS15280 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS15280 PF07702 UTRA domain FIV04_RS15290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS15290 PF00672 HAMP domain FIV04_RS15290 PF12729 Four helix bundle sensory module for signal transduction FIV04_RS15295 PF00873 AcrB/AcrD/AcrF family FIV04_RS15300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV04_RS15305 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FIV04_RS15310 PF12262 Bacterial virulence factor lipase N-terminal FIV04_RS15315 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS15315 PF00072 Response regulator receiver domain FIV04_RS15325 PF03606 C4-dicarboxylate anaerobic carrier FIV04_RS15330 PF00196 Bacterial regulatory proteins, luxR family FIV04_RS15330 PF00072 Response regulator receiver domain FIV04_RS15335 PF07730 Histidine kinase FIV04_RS15335 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FIV04_RS15335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS15335 PF00672 HAMP domain FIV04_RS15350 PF00384 Molybdopterin oxidoreductase FIV04_RS15350 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FIV04_RS15350 PF01568 Molydopterin dinucleotide binding domain FIV04_RS15355 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FIV04_RS15360 PF03264 NapC/NirT cytochrome c family, N-terminal region FIV04_RS15370 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FIV04_RS15370 PF00561 alpha/beta hydrolase fold FIV04_RS15380 PF00108 Thiolase, N-terminal domain FIV04_RS15380 PF02803 Thiolase, C-terminal domain FIV04_RS15385 PF00106 short chain dehydrogenase FIV04_RS15405 PF01037 Lrp/AsnC ligand binding domain FIV04_RS15420 PF16736 Single Cache-like FIV04_RS15420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS15420 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS15420 PF00989 PAS fold FIV04_RS15425 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS15425 PF00072 Response regulator receiver domain FIV04_RS15455 PF01810 LysE type translocator FIV04_RS15460 PF00271 Helicase conserved C-terminal domain FIV04_RS15460 PF00270 DEAD/DEAH box helicase FIV04_RS15465 PF07683 Cobalamin synthesis protein cobW C-terminal domain FIV04_RS15465 PF02492 CobW/HypB/UreG, nucleotide-binding domain FIV04_RS15470 PF00654 Voltage gated chloride channel FIV04_RS15480 PF00563 EAL domain FIV04_RS15480 PF13426 PAS domain FIV04_RS15480 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS15485 PF00042 Globin FIV04_RS15485 PF00175 Oxidoreductase NAD-binding domain FIV04_RS15485 PF00970 Oxidoreductase FAD-binding domain FIV04_RS15490 PF00158 Sigma-54 interaction domain FIV04_RS15490 PF01590 GAF domain FIV04_RS15500 PF00691 OmpA family FIV04_RS15500 PF13488 Glycine zipper FIV04_RS15510 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FIV04_RS15510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIV04_RS15515 PF16925 Tetracyclin repressor-like, C-terminal domain FIV04_RS15515 PF00440 Bacterial regulatory proteins, tetR family FIV04_RS15520 PF00107 Zinc-binding dehydrogenase FIV04_RS15520 PF16884 N-terminal domain of oxidoreductase FIV04_RS15530 PF00849 RNA pseudouridylate synthase FIV04_RS15540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS15540 PF03466 LysR substrate binding domain FIV04_RS15545 PF00768 D-alanyl-D-alanine carboxypeptidase FIV04_RS15545 PF07943 Penicillin-binding protein 5, C-terminal domain FIV04_RS15560 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS15565 PF06483 Chitinase C FIV04_RS15565 PF00704 Glycosyl hydrolases family 18 FIV04_RS15575 PF02028 BCCT, betaine/carnitine/choline family transporter FIV04_RS15595 PF01212 Beta-eliminating lyase FIV04_RS15615 PF12833 Helix-turn-helix domain FIV04_RS15615 PF06719 AraC-type transcriptional regulator N-terminus FIV04_RS15620 PF00465 Iron-containing alcohol dehydrogenase FIV04_RS15625 PF00005 ABC transporter FIV04_RS15630 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS15635 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV04_RS15640 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS15645 PF07715 TonB-dependent Receptor Plug Domain FIV04_RS15645 PF00593 TonB dependent receptor FIV04_RS15650 PF12833 Helix-turn-helix domain FIV04_RS15650 PF02311 AraC-like ligand binding domain FIV04_RS15655 PF03466 LysR substrate binding domain FIV04_RS15655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS15660 PF01810 LysE type translocator FIV04_RS15745 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FIV04_RS15765 PF00378 Enoyl-CoA hydratase/isomerase FIV04_RS15770 PF01032 FecCD transport family FIV04_RS15780 PF00593 TonB dependent receptor FIV04_RS15780 PF07715 TonB-dependent Receptor Plug Domain FIV04_RS15785 PF12833 Helix-turn-helix domain FIV04_RS15795 PF00005 ABC transporter FIV04_RS15800 PF07690 Major Facilitator Superfamily FIV04_RS15805 PF07995 Glucose / Sorbosone dehydrogenase FIV04_RS15815 PF00313 'Cold-shock' DNA-binding domain FIV04_RS15820 PF07152 YaeQ protein FIV04_RS15830 PF01227 GTP cyclohydrolase I FIV04_RS15835 PF03453 MoeA N-terminal region (domain I and II) FIV04_RS15835 PF03454 MoeA C-terminal region (domain IV) FIV04_RS15835 PF00994 Probable molybdopterin binding domain FIV04_RS15840 PF00899 ThiF family FIV04_RS15860 PF00581 Rhodanese-like domain FIV04_RS15865 PF00563 EAL domain FIV04_RS15865 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS15865 PF03707 Bacterial signalling protein N terminal repeat FIV04_RS15875 PF00923 Transaldolase/Fructose-6-phosphate aldolase FIV04_RS15880 PF00456 Transketolase, thiamine diphosphate binding domain FIV04_RS15880 PF02779 Transketolase, pyrimidine binding domain FIV04_RS15880 PF02780 Transketolase, C-terminal domain FIV04_RS15885 PF01037 Lrp/AsnC ligand binding domain FIV04_RS15895 PF08447 PAS fold FIV04_RS15895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS15900 PF03279 Bacterial lipid A biosynthesis acyltransferase FIV04_RS15905 PF07690 Major Facilitator Superfamily FIV04_RS15910 PF03466 LysR substrate binding domain FIV04_RS15910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS15915 PF00072 Response regulator receiver domain FIV04_RS15915 PF09308 LuxQ, periplasmic FIV04_RS15915 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS15915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS15920 PF00072 Response regulator receiver domain FIV04_RS15925 PF00474 Sodium:solute symporter family FIV04_RS15940 PF07729 FCD domain FIV04_RS15940 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS15945 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS15945 PF07729 FCD domain FIV04_RS15960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS15960 PF03466 LysR substrate binding domain FIV04_RS15970 PF00005 ABC transporter FIV04_RS15975 PF01032 FecCD transport family FIV04_RS15980 PF01032 FecCD transport family FIV04_RS15985 PF01497 Periplasmic binding protein FIV04_RS15990 PF01557 Fumarylacetoacetate (FAA) hydrolase family FIV04_RS16000 PF05426 Alginate lyase FIV04_RS16000 PF07940 Heparinase II/III-like protein FIV04_RS16005 PF07940 Heparinase II/III-like protein FIV04_RS16005 PF05426 Alginate lyase FIV04_RS16010 PF07883 Cupin domain FIV04_RS16015 PF00294 pfkB family carbohydrate kinase FIV04_RS16020 PF01081 KDPG and KHG aldolase FIV04_RS16045 PF01594 AI-2E family transporter FIV04_RS16055 PF13533 Biotin-lipoyl like FIV04_RS16070 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FIV04_RS16070 PF12833 Helix-turn-helix domain FIV04_RS16080 PF00873 AcrB/AcrD/AcrF family FIV04_RS16105 PF02581 Thiamine monophosphate synthase FIV04_RS16110 PF02743 Cache domain FIV04_RS16110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS16110 PF00672 HAMP domain FIV04_RS16115 PF02110 Hydroxyethylthiazole kinase family FIV04_RS16120 PF03070 TENA/THI-4/PQQC family FIV04_RS16125 PF09084 NMT1/THI5 like FIV04_RS16130 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS16135 PF00005 ABC transporter FIV04_RS16140 PF08543 Phosphomethylpyrimidine kinase FIV04_RS16155 PF03471 Transporter associated domain FIV04_RS16155 PF03741 Integral membrane protein TerC family FIV04_RS16170 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS16170 PF18500 CadC C-terminal domain 1 FIV04_RS16190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV04_RS16200 PF08241 Methyltransferase domain FIV04_RS16205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS16205 PF12729 Four helix bundle sensory module for signal transduction FIV04_RS16205 PF00672 HAMP domain FIV04_RS16210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS16210 PF03466 LysR substrate binding domain FIV04_RS16225 PF12837 4Fe-4S binding domain FIV04_RS16225 PF12801 4Fe-4S binding domain FIV04_RS16230 PF12800 4Fe-4S binding domain FIV04_RS16230 PF12838 4Fe-4S dicluster domain FIV04_RS16290 PF00072 Response regulator receiver domain FIV04_RS16290 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS16295 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS16295 PF00672 HAMP domain FIV04_RS16295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS16300 PF13460 NAD(P)H-binding FIV04_RS16300 PF11066 Protein of unknown function (DUF2867) FIV04_RS16315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS16315 PF12729 Four helix bundle sensory module for signal transduction FIV04_RS16315 PF00672 HAMP domain FIV04_RS16325 PF00563 EAL domain FIV04_RS16325 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS16325 PF03707 Bacterial signalling protein N terminal repeat FIV04_RS16340 PF01965 DJ-1/PfpI family FIV04_RS16345 PF13737 Transposase DDE domain FIV04_RS16350 PF00478 IMP dehydrogenase / GMP reductase domain FIV04_RS16380 PF01554 MatE FIV04_RS16385 PF03466 LysR substrate binding domain FIV04_RS16385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS16390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS16395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS16395 PF08447 PAS fold FIV04_RS16400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV04_RS16415 PF00069 Protein kinase domain FIV04_RS16430 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FIV04_RS16450 PF10431 C-terminal, D2-small domain, of ClpB protein FIV04_RS16450 PF07724 AAA domain (Cdc48 subfamily) FIV04_RS16450 PF00004 ATPase family associated with various cellular activities (AAA) FIV04_RS16450 PF17871 AAA lid domain FIV04_RS16475 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FIV04_RS16510 PF04717 Type VI secretion system, phage-baseplate injector FIV04_RS16510 PF06715 Gp5 C-terminal repeat (3 copies) FIV04_RS16520 PF07690 Major Facilitator Superfamily FIV04_RS16530 PF11849 Domain of unknown function (DUF3369) FIV04_RS16535 PF00072 Response regulator receiver domain FIV04_RS16535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS16535 PF13426 PAS domain FIV04_RS16555 PF03594 Benzoate membrane transport protein FIV04_RS16560 PF01381 Helix-turn-helix FIV04_RS16560 PF07883 Cupin domain FIV04_RS16565 PF01734 Patatin-like phospholipase FIV04_RS16570 PF04231 Endonuclease I FIV04_RS16595 PF00132 Bacterial transferase hexapeptide (six repeats) FIV04_RS16620 PF08448 PAS fold FIV04_RS16620 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS16625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS16625 PF02743 Cache domain FIV04_RS16625 PF00672 HAMP domain FIV04_RS16630 PF03707 Bacterial signalling protein N terminal repeat FIV04_RS16630 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS16630 PF00563 EAL domain FIV04_RS16635 PF00871 Acetokinase family FIV04_RS16640 PF03707 Bacterial signalling protein N terminal repeat FIV04_RS16640 PF00563 EAL domain FIV04_RS16640 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS16645 PF00271 Helicase conserved C-terminal domain FIV04_RS16645 PF00270 DEAD/DEAH box helicase FIV04_RS16645 PF03880 DbpA RNA binding domain FIV04_RS16650 PF17876 Cold shock domain FIV04_RS16650 PF08206 Ribonuclease B OB domain FIV04_RS16650 PF00773 RNB domain FIV04_RS16650 PF00575 S1 RNA binding domain FIV04_RS16655 PF12833 Helix-turn-helix domain FIV04_RS16665 PF12849 PBP superfamily domain FIV04_RS16670 PF01575 MaoC like domain FIV04_RS16675 PF00873 AcrB/AcrD/AcrF family FIV04_RS16680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV04_RS16685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FIV04_RS16700 PF01546 Peptidase family M20/M25/M40 FIV04_RS16700 PF07687 Peptidase dimerisation domain FIV04_RS16705 PF00248 Aldo/keto reductase family FIV04_RS16710 PF00588 SpoU rRNA Methylase family FIV04_RS16710 PF08032 RNA 2'-O ribose methyltransferase substrate binding FIV04_RS16715 PF11953 Domain of unknown function (DUF3470) FIV04_RS16715 PF00037 4Fe-4S binding domain FIV04_RS16725 PF00881 Nitroreductase family FIV04_RS16730 PF00270 DEAD/DEAH box helicase FIV04_RS16730 PF00271 Helicase conserved C-terminal domain FIV04_RS16735 PF00132 Bacterial transferase hexapeptide (six repeats) FIV04_RS16735 PF12804 MobA-like NTP transferase domain FIV04_RS16735 PF03479 Plants and Prokaryotes Conserved (PCC) domain FIV04_RS16740 PF07733 Bacterial DNA polymerase III alpha NTPase domain FIV04_RS16740 PF02811 PHP domain FIV04_RS16740 PF14579 Helix-hairpin-helix motif FIV04_RS16740 PF11490 DNA polymerase III polC-type N-terminus II FIV04_RS16740 PF00929 Exonuclease FIV04_RS16740 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FIV04_RS16755 PF00270 DEAD/DEAH box helicase FIV04_RS16755 PF00271 Helicase conserved C-terminal domain FIV04_RS16755 PF03880 DbpA RNA binding domain FIV04_RS16760 PF00114 Pilin (bacterial filament) FIV04_RS16760 PF07963 Prokaryotic N-terminal methylation motif FIV04_RS16765 PF00248 Aldo/keto reductase family FIV04_RS16795 PF00196 Bacterial regulatory proteins, luxR family FIV04_RS16795 PF00072 Response regulator receiver domain FIV04_RS16805 PF05552 Conserved TM helix FIV04_RS16805 PF00924 Mechanosensitive ion channel FIV04_RS16820 PF11412 Disulphide bond corrector protein DsbC FIV04_RS16820 PF02683 Cytochrome C biogenesis protein transmembrane region FIV04_RS16825 PF00085 Thioredoxin FIV04_RS16840 PF13609 Gram-negative porin FIV04_RS16845 PF00892 EamA-like transporter family FIV04_RS16850 PF00462 Glutaredoxin FIV04_RS16860 PF07690 Major Facilitator Superfamily FIV04_RS16865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS16865 PF03466 LysR substrate binding domain FIV04_RS16870 PF00563 EAL domain FIV04_RS16870 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS16870 PF08447 PAS fold FIV04_RS16870 PF08448 PAS fold FIV04_RS16875 PF01476 LysM domain FIV04_RS16875 PF08525 Opacity-associated protein A N-terminal motif FIV04_RS16875 PF01551 Peptidase family M23 FIV04_RS16900 PF07670 Nucleoside recognition FIV04_RS16905 PF02743 Cache domain FIV04_RS16905 PF00672 HAMP domain FIV04_RS16905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS16910 PF00128 Alpha amylase, catalytic domain FIV04_RS16920 PF01584 CheW-like domain FIV04_RS16920 PF00072 Response regulator receiver domain FIV04_RS16930 PF01243 Pyridoxamine 5'-phosphate oxidase FIV04_RS16935 PF06228 Haem utilisation ChuX/HutX FIV04_RS16940 PF04055 Radical SAM superfamily FIV04_RS16945 PF03544 Gram-negative bacterial TonB protein C-terminal FIV04_RS16950 PF01618 MotA/TolQ/ExbB proton channel family FIV04_RS16955 PF02472 Biopolymer transport protein ExbD/TolR FIV04_RS16965 PF01032 FecCD transport family FIV04_RS16970 PF00005 ABC transporter FIV04_RS17015 PF02540 NAD synthase FIV04_RS17020 PF03476 MOSC N-terminal beta barrel domain FIV04_RS17020 PF03473 MOSC domain FIV04_RS17020 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV04_RS17025 PF01679 Proteolipid membrane potential modulator FIV04_RS17030 PF01979 Amidohydrolase family FIV04_RS17035 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS17035 PF17151 Periplasmic sensor domain FIV04_RS17050 PF01274 Malate synthase FIV04_RS17055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS17055 PF03466 LysR substrate binding domain FIV04_RS17060 PF00463 Isocitrate lyase family FIV04_RS17070 PF01523 Putative modulator of DNA gyrase FIV04_RS17075 PF01523 Putative modulator of DNA gyrase FIV04_RS17100 PF00005 ABC transporter FIV04_RS17105 PF02687 FtsX-like permease family FIV04_RS17105 PF12704 MacB-like periplasmic core domain FIV04_RS17125 PF07690 Major Facilitator Superfamily FIV04_RS17130 PF03466 LysR substrate binding domain FIV04_RS17130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS17135 PF00155 Aminotransferase class I and II FIV04_RS17160 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS17165 PF14785 Maltose transport system permease protein MalF P2 domain FIV04_RS17165 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS17170 PF01547 Bacterial extracellular solute-binding protein FIV04_RS17175 PF00005 ABC transporter FIV04_RS17175 PF08402 TOBE domain FIV04_RS17185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS17185 PF00672 HAMP domain FIV04_RS17185 PF02743 Cache domain FIV04_RS17190 PF17863 AAA lid domain FIV04_RS17190 PF07726 ATPase family associated with various cellular activities (AAA) FIV04_RS17195 PF01882 Protein of unknown function DUF58 FIV04_RS17210 PF13519 von Willebrand factor type A domain FIV04_RS17210 PF07584 Aerotolerance regulator N-terminal FIV04_RS17220 PF17158 Membrane-associated sensor, integral membrane domain FIV04_RS17220 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS17225 PF00005 ABC transporter FIV04_RS17230 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS17235 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS17240 PF12849 PBP superfamily domain FIV04_RS17245 PF02743 Cache domain FIV04_RS17245 PF00672 HAMP domain FIV04_RS17245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS17265 PF07715 TonB-dependent Receptor Plug Domain FIV04_RS17265 PF00593 TonB dependent receptor FIV04_RS17270 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FIV04_RS17270 PF00326 Prolyl oligopeptidase family FIV04_RS17275 PF03280 Proteobacterial lipase chaperone protein FIV04_RS17280 PF00561 alpha/beta hydrolase fold FIV04_RS17285 PF00657 GDSL-like Lipase/Acylhydrolase FIV04_RS17290 PF00271 Helicase conserved C-terminal domain FIV04_RS17290 PF00270 DEAD/DEAH box helicase FIV04_RS17300 PF03734 L,D-transpeptidase catalytic domain FIV04_RS17300 PF17969 L,D-transpeptidase C-terminal domain FIV04_RS17300 PF01476 LysM domain FIV04_RS17305 PF01048 Phosphorylase superfamily FIV04_RS17320 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS17330 PF11742 Protein of unknown function (DUF3302) FIV04_RS17335 PF00529 HlyD membrane-fusion protein of T1SS FIV04_RS17335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV04_RS17340 PF07155 ECF-type riboflavin transporter, S component FIV04_RS17345 PF12558 ATP-binding cassette cobalt transporter FIV04_RS17345 PF00005 ABC transporter FIV04_RS17360 PF02806 Alpha amylase, C-terminal all-beta domain FIV04_RS17360 PF00128 Alpha amylase, catalytic domain FIV04_RS17360 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FIV04_RS17365 PF02446 4-alpha-glucanotransferase FIV04_RS17370 PF00343 Carbohydrate phosphorylase FIV04_RS17375 PF17874 MalT-like TPR region FIV04_RS17375 PF00196 Bacterial regulatory proteins, luxR family FIV04_RS17390 PF02630 SCO1/SenC FIV04_RS17400 PF03193 RsgA GTPase FIV04_RS17405 PF00375 Sodium:dicarboxylate symporter family FIV04_RS17415 PF03466 LysR substrate binding domain FIV04_RS17415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS17420 PF01037 Lrp/AsnC ligand binding domain FIV04_RS17425 PF01810 LysE type translocator FIV04_RS17440 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FIV04_RS17440 PF18494 Pullulanase Ins domain FIV04_RS17440 PF11852 Domain of unknown function (DUF3372) FIV04_RS17440 PF03714 Bacterial pullanase-associated domain FIV04_RS17440 PF17967 Pullulanase N2 domain FIV04_RS17445 PF03466 LysR substrate binding domain FIV04_RS17445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS17450 PF00128 Alpha amylase, catalytic domain FIV04_RS17450 PF16657 Maltogenic Amylase, C-terminal domain FIV04_RS17455 PF01547 Bacterial extracellular solute-binding protein FIV04_RS17475 PF02264 LamB porin FIV04_RS17480 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FIV04_RS17480 PF00128 Alpha amylase, catalytic domain FIV04_RS17490 PF04816 tRNA (adenine(22)-N(1))-methyltransferase FIV04_RS17495 PF01553 Acyltransferase FIV04_RS17500 PF12833 Helix-turn-helix domain FIV04_RS17500 PF01965 DJ-1/PfpI family FIV04_RS17520 PF00970 Oxidoreductase FAD-binding domain FIV04_RS17520 PF00175 Oxidoreductase NAD-binding domain FIV04_RS17525 PF09313 Domain of unknown function (DUF1971) FIV04_RS17530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIV04_RS17530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIV04_RS17535 PF01734 Patatin-like phospholipase FIV04_RS17540 PF02595 Glycerate kinase family FIV04_RS17550 PF01261 Xylose isomerase-like TIM barrel FIV04_RS17555 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FIV04_RS17565 PF00596 Class II Aldolase and Adducin N-terminal domain FIV04_RS17570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FIV04_RS17575 PF03611 PTS system sugar-specific permease component FIV04_RS17580 PF08220 DeoR-like helix-turn-helix domain FIV04_RS17580 PF00455 DeoR C terminal sensor domain FIV04_RS17605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FIV04_RS17605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV04_RS17615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS17615 PF03466 LysR substrate binding domain FIV04_RS17630 PF00376 MerR family regulatory protein FIV04_RS17630 PF09278 MerR, DNA binding FIV04_RS17660 PF01758 Sodium Bile acid symporter family FIV04_RS17665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS17665 PF03466 LysR substrate binding domain FIV04_RS17675 PF00230 Major intrinsic protein FIV04_RS17680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FIV04_RS17680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FIV04_RS17685 PF08220 DeoR-like helix-turn-helix domain FIV04_RS17685 PF00455 DeoR C terminal sensor domain FIV04_RS17690 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FIV04_RS17690 PF01266 FAD dependent oxidoreductase FIV04_RS17695 PF00106 short chain dehydrogenase FIV04_RS17700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS17700 PF03466 LysR substrate binding domain FIV04_RS17715 PF00106 short chain dehydrogenase FIV04_RS17735 PF00005 ABC transporter FIV04_RS17740 PF01497 Periplasmic binding protein FIV04_RS17745 PF01032 FecCD transport family FIV04_RS17755 PF07715 TonB-dependent Receptor Plug Domain FIV04_RS17755 PF00593 TonB dependent receptor FIV04_RS17760 PF13091 PLD-like domain FIV04_RS17765 PF16326 ABC transporter C-terminal domain FIV04_RS17765 PF00005 ABC transporter FIV04_RS17765 PF12848 ABC transporter FIV04_RS17770 PF00248 Aldo/keto reductase family FIV04_RS17780 PF12833 Helix-turn-helix domain FIV04_RS17780 PF02311 AraC-like ligand binding domain FIV04_RS17785 PF02909 Tetracyclin repressor-like, C-terminal domain FIV04_RS17785 PF00440 Bacterial regulatory proteins, tetR family FIV04_RS17790 PF01872 RibD C-terminal domain FIV04_RS17810 PF00480 ROK family FIV04_RS17815 PF16657 Maltogenic Amylase, C-terminal domain FIV04_RS17815 PF02903 Alpha amylase, N-terminal ig-like domain FIV04_RS17815 PF00128 Alpha amylase, catalytic domain FIV04_RS17820 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS17825 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS17830 PF13416 Bacterial extracellular solute-binding protein FIV04_RS17840 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FIV04_RS17840 PF00132 Bacterial transferase hexapeptide (six repeats) FIV04_RS17855 PF00005 ABC transporter FIV04_RS17855 PF17912 MalK OB fold domain FIV04_RS17855 PF03459 TOBE domain FIV04_RS17860 PF00686 Starch binding domain FIV04_RS17860 PF00128 Alpha amylase, catalytic domain FIV04_RS17865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS17865 PF03466 LysR substrate binding domain FIV04_RS17870 PF07690 Major Facilitator Superfamily FIV04_RS17875 PF14602 Hexapeptide repeat of succinyl-transferase FIV04_RS17875 PF12464 Maltose acetyltransferase FIV04_RS17880 PF00107 Zinc-binding dehydrogenase FIV04_RS17880 PF08240 Alcohol dehydrogenase GroES-like domain FIV04_RS17885 PF00356 Bacterial regulatory proteins, lacI family FIV04_RS17890 PF00232 Glycosyl hydrolase family 1 FIV04_RS17905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV04_RS17915 PF01554 MatE FIV04_RS17920 PF00106 short chain dehydrogenase FIV04_RS17925 PF02219 Methylenetetrahydrofolate reductase FIV04_RS17925 PF02574 Homocysteine S-methyltransferase FIV04_RS17930 PF01475 Ferric uptake regulator family FIV04_RS17945 PF00109 Beta-ketoacyl synthase, N-terminal domain FIV04_RS17945 PF16197 Ketoacyl-synthetase C-terminal extension FIV04_RS17945 PF00107 Zinc-binding dehydrogenase FIV04_RS17945 PF02801 Beta-ketoacyl synthase, C-terminal domain FIV04_RS17945 PF14765 Polyketide synthase dehydratase FIV04_RS17945 PF00550 Phosphopantetheine attachment site FIV04_RS17945 PF08240 Alcohol dehydrogenase GroES-like domain FIV04_RS17945 PF00698 Acyl transferase domain FIV04_RS17945 PF08659 KR domain FIV04_RS17955 PF07690 Major Facilitator Superfamily FIV04_RS17960 PF02311 AraC-like ligand binding domain FIV04_RS17960 PF12833 Helix-turn-helix domain FIV04_RS17970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS17970 PF03466 LysR substrate binding domain FIV04_RS17975 PF00962 Adenosine/AMP deaminase FIV04_RS17985 PF07963 Prokaryotic N-terminal methylation motif FIV04_RS17995 PF00255 Glutathione peroxidase FIV04_RS18000 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS18000 PF07702 UTRA domain FIV04_RS18010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FIV04_RS18010 PF13378 Enolase C-terminal domain-like FIV04_RS18015 PF02378 Phosphotransferase system, EIIC FIV04_RS18015 PF00367 phosphotransferase system, EIIB FIV04_RS18020 PF00294 pfkB family carbohydrate kinase FIV04_RS18025 PF01081 KDPG and KHG aldolase FIV04_RS18030 PF03109 ABC1 family FIV04_RS18035 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS18035 PF03707 Bacterial signalling protein N terminal repeat FIV04_RS18035 PF00563 EAL domain FIV04_RS18040 PF01047 MarR family FIV04_RS18045 PF00664 ABC transporter transmembrane region FIV04_RS18045 PF00005 ABC transporter FIV04_RS18050 PF00005 ABC transporter FIV04_RS18050 PF00664 ABC transporter transmembrane region FIV04_RS18055 PF00593 TonB dependent receptor FIV04_RS18055 PF07715 TonB-dependent Receptor Plug Domain FIV04_RS18065 PF12833 Helix-turn-helix domain FIV04_RS18070 PF00005 ABC transporter FIV04_RS18070 PF00571 CBS domain FIV04_RS18075 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS18080 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FIV04_RS18085 PF05199 GMC oxidoreductase FIV04_RS18085 PF00732 GMC oxidoreductase FIV04_RS18090 PF00171 Aldehyde dehydrogenase family FIV04_RS18095 PF00440 Bacterial regulatory proteins, tetR family FIV04_RS18095 PF13977 BetI-type transcriptional repressor, C-terminal FIV04_RS18115 PF08402 TOBE domain FIV04_RS18115 PF00005 ABC transporter FIV04_RS18135 PF01547 Bacterial extracellular solute-binding protein FIV04_RS18140 PF07702 UTRA domain FIV04_RS18140 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS18160 PF00202 Aminotransferase class-III FIV04_RS18165 PF00171 Aldehyde dehydrogenase family FIV04_RS18170 PF04371 Porphyromonas-type peptidyl-arginine deiminase FIV04_RS18175 PF00795 Carbon-nitrogen hydrolase FIV04_RS18180 PF01266 FAD dependent oxidoreductase FIV04_RS18185 PF00171 Aldehyde dehydrogenase family FIV04_RS18190 PF07883 Cupin domain FIV04_RS18190 PF01381 Helix-turn-helix FIV04_RS18195 PF07722 Peptidase C26 FIV04_RS18205 PF00120 Glutamine synthetase, catalytic domain FIV04_RS18210 PF03553 Na+/H+ antiporter family FIV04_RS18225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS18225 PF03466 LysR substrate binding domain FIV04_RS18240 PF00664 ABC transporter transmembrane region FIV04_RS18240 PF00005 ABC transporter FIV04_RS18260 PF01037 Lrp/AsnC ligand binding domain FIV04_RS18270 PF00474 Sodium:solute symporter family FIV04_RS18280 PF14850 DNA-binding domain of Proline dehydrogenase FIV04_RS18280 PF01619 Proline dehydrogenase FIV04_RS18280 PF00171 Aldehyde dehydrogenase family FIV04_RS18280 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FIV04_RS18285 PF12833 Helix-turn-helix domain FIV04_RS18305 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FIV04_RS18305 PF01243 Pyridoxamine 5'-phosphate oxidase FIV04_RS18310 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS18310 PF02743 Cache domain FIV04_RS18310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS18315 PF00158 Sigma-54 interaction domain FIV04_RS18315 PF02954 Bacterial regulatory protein, Fis family FIV04_RS18315 PF00072 Response regulator receiver domain FIV04_RS18320 PF00529 HlyD membrane-fusion protein of T1SS FIV04_RS18335 PF03412 Peptidase C39 family FIV04_RS18335 PF00005 ABC transporter FIV04_RS18335 PF00664 ABC transporter transmembrane region FIV04_RS18345 PF13718 GNAT acetyltransferase 2 FIV04_RS18345 PF05127 Helicase FIV04_RS18350 PF08775 ParB family FIV04_RS18350 PF02195 ParB-like nuclease domain FIV04_RS18355 PF18607 ParA helix turn helix domain FIV04_RS18355 PF13614 AAA domain FIV04_RS18370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV04_RS18370 PF00005 ABC transporter FIV04_RS18375 PF00005 ABC transporter FIV04_RS18375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV04_RS18385 PF08719 Domain of unknown function (DUF1768) FIV04_RS18385 PF00925 GTP cyclohydrolase II FIV04_RS18395 PF00072 Response regulator receiver domain FIV04_RS18395 PF01627 Hpt domain FIV04_RS18395 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FIV04_RS18395 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS18395 PF00672 HAMP domain FIV04_RS18395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS18400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV04_RS18405 PF04209 homogentisate 1,2-dioxygenase FIV04_RS18415 PF14497 Glutathione S-transferase, C-terminal domain FIV04_RS18415 PF02798 Glutathione S-transferase, N-terminal domain FIV04_RS18420 PF00501 AMP-binding enzyme FIV04_RS18420 PF13193 AMP-binding enzyme C-terminal domain FIV04_RS18425 PF00351 Biopterin-dependent aromatic amino acid hydroxylase FIV04_RS18430 PF01329 Pterin 4 alpha carbinolamine dehydratase FIV04_RS18440 PF01709 Transcriptional regulator FIV04_RS18455 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FIV04_RS18455 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FIV04_RS18460 PF00102 Protein-tyrosine phosphatase FIV04_RS18460 PF09013 YopH, N-terminal FIV04_RS18480 PF12704 MacB-like periplasmic core domain FIV04_RS18480 PF02687 FtsX-like permease family FIV04_RS18480 PF00005 ABC transporter FIV04_RS18500 PF07694 5TMR of 5TMR-LYT FIV04_RS18500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS18500 PF06580 Histidine kinase FIV04_RS18505 PF04397 LytTr DNA-binding domain FIV04_RS18505 PF00072 Response regulator receiver domain FIV04_RS18510 PF00675 Insulinase (Peptidase family M16) FIV04_RS18510 PF05193 Peptidase M16 inactive domain FIV04_RS18520 PF07549 SecD/SecF GG Motif FIV04_RS18520 PF02355 Protein export membrane protein FIV04_RS18520 PF13721 SecD export protein N-terminal TM region FIV04_RS18525 PF07549 SecD/SecF GG Motif FIV04_RS18525 PF02355 Protein export membrane protein FIV04_RS18535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FIV04_RS18540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS18540 PF03466 LysR substrate binding domain FIV04_RS18560 PF01220 Dehydroquinase class II FIV04_RS18565 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FIV04_RS18565 PF08501 Shikimate dehydrogenase substrate binding domain FIV04_RS18570 PF03737 Aldolase/RraA FIV04_RS18575 PF04303 PrpF protein FIV04_RS18580 PF04909 Amidohydrolase FIV04_RS18585 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit FIV04_RS18590 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FIV04_RS18595 PF01161 Phosphatidylethanolamine-binding protein FIV04_RS18600 PF12833 Helix-turn-helix domain FIV04_RS18605 PF02585 GlcNAc-PI de-N-acetylase FIV04_RS18610 PF00248 Aldo/keto reductase family FIV04_RS18615 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV04_RS18625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS18625 PF03466 LysR substrate binding domain FIV04_RS18630 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV04_RS18640 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV04_RS18645 PF03547 Membrane transport protein FIV04_RS18655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV04_RS18655 PF01261 Xylose isomerase-like TIM barrel FIV04_RS18660 PF13192 Thioredoxin domain FIV04_RS18660 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS18665 PF00578 AhpC/TSA family FIV04_RS18665 PF10417 C-terminal domain of 1-Cys peroxiredoxin FIV04_RS18690 PF01593 Flavin containing amine oxidoreductase FIV04_RS18695 PF00106 short chain dehydrogenase FIV04_RS18705 PF00875 DNA photolyase FIV04_RS18705 PF03441 FAD binding domain of DNA photolyase FIV04_RS18715 PF12973 ChrR Cupin-like domain FIV04_RS18720 PF04545 Sigma-70, region 4 FIV04_RS18720 PF04542 Sigma-70 region 2 FIV04_RS18730 PF14552 Tautomerase enzyme FIV04_RS18740 PF10928 Protein of unknown function (DUF2810) FIV04_RS18745 PF03616 Sodium/glutamate symporter FIV04_RS18750 PF18113 Rubredoxin binding C-terminal domain FIV04_RS18750 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS18755 PF00301 Rubredoxin FIV04_RS18755 PF00753 Metallo-beta-lactamase superfamily FIV04_RS18755 PF00258 Flavodoxin FIV04_RS18760 PF00881 Nitroreductase family FIV04_RS18770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FIV04_RS18770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FIV04_RS18770 PF02378 Phosphotransferase system, EIIC FIV04_RS18775 PF08125 Mannitol dehydrogenase C-terminal domain FIV04_RS18775 PF01232 Mannitol dehydrogenase Rossmann domain FIV04_RS18780 PF05068 Mannitol repressor FIV04_RS18785 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FIV04_RS18795 PF03466 LysR substrate binding domain FIV04_RS18795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS18805 PF06029 AlkA N-terminal domain FIV04_RS18805 PF00730 HhH-GPD superfamily base excision DNA repair protein FIV04_RS18810 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FIV04_RS18810 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FIV04_RS18820 PF03600 Citrate transporter FIV04_RS18825 PF07670 Nucleoside recognition FIV04_RS18830 PF07670 Nucleoside recognition FIV04_RS18835 PF01124 MAPEG family FIV04_RS18855 PF01569 PAP2 superfamily FIV04_RS18865 PF12852 Cupin FIV04_RS18865 PF12833 Helix-turn-helix domain FIV04_RS18890 PF12697 Alpha/beta hydrolase family FIV04_RS18895 PF08329 Chitinase A, N-terminal domain FIV04_RS18895 PF00704 Glycosyl hydrolases family 18 FIV04_RS18905 PF06865 Pyrimidine/purine nucleoside phosphorylase FIV04_RS18910 PF05726 Pirin C-terminal cupin domain FIV04_RS18910 PF02678 Pirin FIV04_RS18920 PF00563 EAL domain FIV04_RS18920 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS18940 PF00581 Rhodanese-like domain FIV04_RS18940 PF17773 UPF0176 acylphosphatase like domain FIV04_RS18950 PF00155 Aminotransferase class I and II FIV04_RS18955 PF12833 Helix-turn-helix domain FIV04_RS18955 PF01497 Periplasmic binding protein FIV04_RS18965 PF01070 FMN-dependent dehydrogenase FIV04_RS18970 PF02652 L-lactate permease FIV04_RS18975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS18975 PF03466 LysR substrate binding domain FIV04_RS18980 PF00326 Prolyl oligopeptidase family FIV04_RS18980 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FIV04_RS18985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV04_RS18985 PF00005 ABC transporter FIV04_RS18995 PF13654 AAA domain FIV04_RS18995 PF05362 Lon protease (S16) C-terminal proteolytic domain FIV04_RS19000 PF07238 PilZ domain FIV04_RS19000 PF12945 Flagellar protein YcgR FIV04_RS19030 PF00892 EamA-like transporter family FIV04_RS19050 PF03466 LysR substrate binding domain FIV04_RS19050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS19060 PF01047 MarR family FIV04_RS19070 PF01274 Malate synthase FIV04_RS19075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIV04_RS19075 PF00205 Thiamine pyrophosphate enzyme, central domain FIV04_RS19075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIV04_RS19080 PF01261 Xylose isomerase-like TIM barrel FIV04_RS19085 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FIV04_RS19085 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FIV04_RS19090 PF13660 Domain of unknown function (DUF4147) FIV04_RS19090 PF05161 MOFRL family FIV04_RS19100 PF01979 Amidohydrolase family FIV04_RS19115 PF01979 Amidohydrolase family FIV04_RS19125 PF00860 Permease family FIV04_RS19130 PF00576 HIUase/Transthyretin family FIV04_RS19140 PF01014 Uricase FIV04_RS19140 PF09349 OHCU decarboxylase FIV04_RS19145 PF03561 Allantoicase repeat FIV04_RS19150 PF04115 Ureidoglycolate lyase FIV04_RS19170 PF01979 Amidohydrolase family FIV04_RS19180 PF01979 Amidohydrolase family FIV04_RS19190 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FIV04_RS19190 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FIV04_RS19195 PF03450 CO dehydrogenase flavoprotein C-terminal domain FIV04_RS19195 PF00941 FAD binding domain in molybdopterin dehydrogenase FIV04_RS19200 PF07729 FCD domain FIV04_RS19200 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS19210 PF01966 HD domain FIV04_RS19215 PF13419 Haloacid dehalogenase-like hydrolase FIV04_RS19220 PF03605 Anaerobic c4-dicarboxylate membrane transporter FIV04_RS19235 PF00579 tRNA synthetases class I (W and Y) FIV04_RS19240 PF00043 Glutathione S-transferase, C-terminal domain FIV04_RS19240 PF02798 Glutathione S-transferase, N-terminal domain FIV04_RS19245 PF03466 LysR substrate binding domain FIV04_RS19245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS19250 PF00158 Sigma-54 interaction domain FIV04_RS19250 PF02954 Bacterial regulatory protein, Fis family FIV04_RS19250 PF01590 GAF domain FIV04_RS19255 PF00171 Aldehyde dehydrogenase family FIV04_RS19265 PF01546 Peptidase family M20/M25/M40 FIV04_RS19265 PF07687 Peptidase dimerisation domain FIV04_RS19270 PF03606 C4-dicarboxylate anaerobic carrier FIV04_RS19280 PF13344 Haloacid dehalogenase-like hydrolase FIV04_RS19280 PF00293 NUDIX domain FIV04_RS19295 PF01180 Dihydroorotate dehydrogenase FIV04_RS19305 PF00873 AcrB/AcrD/AcrF family FIV04_RS19315 PF00072 Response regulator receiver domain FIV04_RS19315 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS19320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS19320 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS19325 PF00756 Putative esterase FIV04_RS19330 PF08240 Alcohol dehydrogenase GroES-like domain FIV04_RS19330 PF00107 Zinc-binding dehydrogenase FIV04_RS19360 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS19360 PF00072 Response regulator receiver domain FIV04_RS19365 PF16527 Two-component sensor protein CpxA, periplasmic domain FIV04_RS19365 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS19365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS19365 PF00672 HAMP domain FIV04_RS19370 PF00893 Small Multidrug Resistance protein FIV04_RS19375 PF03466 LysR substrate binding domain FIV04_RS19375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS19385 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FIV04_RS19385 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV04_RS19390 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV04_RS19395 PF01266 FAD dependent oxidoreductase FIV04_RS19405 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS19405 PF04324 BFD-like [2Fe-2S] binding domain FIV04_RS19410 PF01042 Endoribonuclease L-PSP FIV04_RS19420 PF00893 Small Multidrug Resistance protein FIV04_RS19435 PF00246 Zinc carboxypeptidase FIV04_RS19440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV04_RS19445 PF03466 LysR substrate binding domain FIV04_RS19445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS19450 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS19455 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS19470 PF13419 Haloacid dehalogenase-like hydrolase FIV04_RS19475 PF17912 MalK OB fold domain FIV04_RS19475 PF00005 ABC transporter FIV04_RS19475 PF03459 TOBE domain FIV04_RS19480 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS19485 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV04_RS19510 PF01238 Phosphomannose isomerase type I FIV04_RS19515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FIV04_RS19515 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FIV04_RS19520 PF12833 Helix-turn-helix domain FIV04_RS19530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FIV04_RS19545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS19545 PF00672 HAMP domain FIV04_RS19545 PF12729 Four helix bundle sensory module for signal transduction FIV04_RS19550 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS19550 PF07702 UTRA domain FIV04_RS19555 PF07690 Major Facilitator Superfamily FIV04_RS19560 PF00294 pfkB family carbohydrate kinase FIV04_RS19565 PF03747 ADP-ribosylglycohydrolase FIV04_RS19570 PF03825 Nucleoside H+ symporter FIV04_RS19585 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS19585 PF00155 Aminotransferase class I and II FIV04_RS19600 PF00672 HAMP domain FIV04_RS19600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS19600 PF17200 Single Cache domain 2 FIV04_RS19610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS19610 PF03466 LysR substrate binding domain FIV04_RS19620 PF00672 HAMP domain FIV04_RS19620 PF17200 Single Cache domain 2 FIV04_RS19620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS19640 PF00128 Alpha amylase, catalytic domain FIV04_RS19640 PF02903 Alpha amylase, N-terminal ig-like domain FIV04_RS19640 PF16657 Maltogenic Amylase, C-terminal domain FIV04_RS19645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS19645 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS19645 PF02743 Cache domain FIV04_RS19650 PF00158 Sigma-54 interaction domain FIV04_RS19650 PF00072 Response regulator receiver domain FIV04_RS19650 PF02954 Bacterial regulatory protein, Fis family FIV04_RS19665 PF00005 ABC transporter FIV04_RS19670 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS19675 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS19695 PF03606 C4-dicarboxylate anaerobic carrier FIV04_RS19700 PF00483 Nucleotidyl transferase FIV04_RS19705 PF03922 OmpW family FIV04_RS19715 PF16868 NMT1-like family FIV04_RS19725 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS19725 PF01590 GAF domain FIV04_RS19725 PF00563 EAL domain FIV04_RS19725 PF00360 Phytochrome region FIV04_RS19730 PF00106 short chain dehydrogenase FIV04_RS19735 PF03466 LysR substrate binding domain FIV04_RS19735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS19740 PF01638 HxlR-like helix-turn-helix FIV04_RS19755 PF13460 NAD(P)H-binding FIV04_RS19760 PF03466 LysR substrate binding domain FIV04_RS19760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS19770 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FIV04_RS19775 PF01569 PAP2 superfamily FIV04_RS19795 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FIV04_RS19820 PF04013 Putative SAM-dependent RNA methyltransferase FIV04_RS19875 PF00698 Acyl transferase domain FIV04_RS19875 PF14765 Polyketide synthase dehydratase FIV04_RS19875 PF08240 Alcohol dehydrogenase GroES-like domain FIV04_RS19875 PF16197 Ketoacyl-synthetase C-terminal extension FIV04_RS19875 PF00109 Beta-ketoacyl synthase, N-terminal domain FIV04_RS19875 PF00550 Phosphopantetheine attachment site FIV04_RS19875 PF02801 Beta-ketoacyl synthase, C-terminal domain FIV04_RS19875 PF08659 KR domain FIV04_RS19880 PF00155 Aminotransferase class I and II FIV04_RS19885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS19885 PF00072 Response regulator receiver domain FIV04_RS19890 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS19890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV04_RS19895 PF00375 Sodium:dicarboxylate symporter family FIV04_RS19900 PF01042 Endoribonuclease L-PSP FIV04_RS19905 PF13309 HTH domain FIV04_RS19905 PF08348 YheO-like PAS domain FIV04_RS19910 PF01554 MatE FIV04_RS19915 PF12833 Helix-turn-helix domain FIV04_RS19915 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FIV04_RS19930 PF00391 PEP-utilising enzyme, mobile domain FIV04_RS19930 PF02896 PEP-utilising enzyme, TIM barrel domain FIV04_RS19930 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FIV04_RS19935 PF03618 Kinase/pyrophosphorylase FIV04_RS19965 PF00672 HAMP domain FIV04_RS19965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS19980 PF13417 Glutathione S-transferase, N-terminal domain FIV04_RS19980 PF04399 Glutaredoxin 2, C terminal domain FIV04_RS19990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV04_RS20005 PF03009 Glycerophosphoryl diester phosphodiesterase family FIV04_RS20020 PF08443 RimK-like ATP-grasp domain FIV04_RS20020 PF18030 RimK PreATP-grasp domain FIV04_RS20025 PF18030 RimK PreATP-grasp domain FIV04_RS20025 PF08443 RimK-like ATP-grasp domain FIV04_RS20035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS20035 PF00672 HAMP domain FIV04_RS20035 PF02743 Cache domain FIV04_RS20040 PF12706 Beta-lactamase superfamily domain FIV04_RS20055 PF12833 Helix-turn-helix domain FIV04_RS20070 PF00849 RNA pseudouridylate synthase FIV04_RS20080 PF13344 Haloacid dehalogenase-like hydrolase FIV04_RS20080 PF00293 NUDIX domain FIV04_RS20100 PF00005 ABC transporter FIV04_RS20110 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS20110 PF00563 EAL domain FIV04_RS20110 PF03707 Bacterial signalling protein N terminal repeat FIV04_RS20115 PF00563 EAL domain FIV04_RS20115 PF17153 Periplasmic sensor domain, extracellular FIV04_RS20125 PF00563 EAL domain FIV04_RS20125 PF13426 PAS domain FIV04_RS20125 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS20135 PF00072 Response regulator receiver domain FIV04_RS20135 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS20140 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS20140 PF00672 HAMP domain FIV04_RS20140 PF16527 Two-component sensor protein CpxA, periplasmic domain FIV04_RS20140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS20145 PF13302 Acetyltransferase (GNAT) domain FIV04_RS20150 PF01966 HD domain FIV04_RS20160 PF07662 Na+ dependent nucleoside transporter C-terminus FIV04_RS20160 PF01773 Na+ dependent nucleoside transporter N-terminus FIV04_RS20160 PF07670 Nucleoside recognition FIV04_RS20180 PF00563 EAL domain FIV04_RS20180 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS20180 PF03707 Bacterial signalling protein N terminal repeat FIV04_RS20185 PF00270 DEAD/DEAH box helicase FIV04_RS20185 PF00271 Helicase conserved C-terminal domain FIV04_RS20200 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS20205 PF00313 'Cold-shock' DNA-binding domain FIV04_RS20210 PF07969 Amidohydrolase family FIV04_RS20215 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FIV04_RS20220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV04_RS20220 PF00529 HlyD membrane-fusion protein of T1SS FIV04_RS20230 PF12833 Helix-turn-helix domain FIV04_RS20230 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FIV04_RS20240 PF00155 Aminotransferase class I and II FIV04_RS20240 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS20245 PF13520 Amino acid permease FIV04_RS20250 PF01037 Lrp/AsnC ligand binding domain FIV04_RS20255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS20255 PF03466 LysR substrate binding domain FIV04_RS20275 PF03063 Prismane/CO dehydrogenase family FIV04_RS20280 PF00175 Oxidoreductase NAD-binding domain FIV04_RS20280 PF00970 Oxidoreductase FAD-binding domain FIV04_RS20280 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV04_RS20285 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FIV04_RS20285 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FIV04_RS20290 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS20290 PF01627 Hpt domain FIV04_RS20290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS20290 PF00672 HAMP domain FIV04_RS20290 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FIV04_RS20290 PF00072 Response regulator receiver domain FIV04_RS20305 PF04363 Protein of unknown function (DUF496) FIV04_RS20315 PF04337 Protein of unknown function, DUF480 FIV04_RS20320 PF01541 GIY-YIG catalytic domain FIV04_RS20325 PF13407 Periplasmic binding protein domain FIV04_RS20330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS20330 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS20330 PF00072 Response regulator receiver domain FIV04_RS20330 PF09308 LuxQ, periplasmic FIV04_RS20350 PF00012 Hsp70 protein FIV04_RS20360 PF01557 Fumarylacetoacetate (FAA) hydrolase family FIV04_RS20365 PF01810 LysE type translocator FIV04_RS20370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FIV04_RS20370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FIV04_RS20370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FIV04_RS20370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FIV04_RS20375 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FIV04_RS20375 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FIV04_RS20380 PF00115 Cytochrome C and Quinol oxidase polypeptide I FIV04_RS20385 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FIV04_RS20390 PF00510 Cytochrome c oxidase subunit III FIV04_RS20410 PF02628 Cytochrome oxidase assembly protein FIV04_RS20415 PF01040 UbiA prenyltransferase family FIV04_RS20430 PF12843 Putative quorum-sensing-regulated virulence factor FIV04_RS20435 PF00793 DAHP synthetase I family FIV04_RS20445 PF00924 Mechanosensitive ion channel FIV04_RS20450 PF02080 TrkA-C domain FIV04_RS20450 PF02254 TrkA-N domain FIV04_RS20455 PF02386 Cation transport protein FIV04_RS20460 PF01641 SelR domain FIV04_RS20460 PF01625 Peptide methionine sulfoxide reductase FIV04_RS20465 PF02566 OsmC-like protein FIV04_RS20470 PF13505 Outer membrane protein beta-barrel domain FIV04_RS20470 PF00691 OmpA family FIV04_RS20475 PF13419 Haloacid dehalogenase-like hydrolase FIV04_RS20480 PF00202 Aminotransferase class-III FIV04_RS20485 PF00266 Aminotransferase class-V FIV04_RS20495 PF01266 FAD dependent oxidoreductase FIV04_RS20500 PF00005 ABC transporter FIV04_RS20505 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS20510 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS20510 PF07702 UTRA domain FIV04_RS20520 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV04_RS20530 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FIV04_RS20530 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV04_RS20535 PF01202 Shikimate kinase FIV04_RS20540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FIV04_RS20540 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FIV04_RS20545 PF00356 Bacterial regulatory proteins, lacI family FIV04_RS20545 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FIV04_RS20555 PF00854 POT family FIV04_RS20560 PF03315 Serine dehydratase beta chain FIV04_RS20560 PF03313 Serine dehydratase alpha chain FIV04_RS20585 PF08264 Anticodon-binding domain of tRNA FIV04_RS20585 PF00133 tRNA synthetases class I (I, L, M and V) FIV04_RS20595 PF00043 Glutathione S-transferase, C-terminal domain FIV04_RS20595 PF13417 Glutathione S-transferase, N-terminal domain FIV04_RS20600 PF03466 LysR substrate binding domain FIV04_RS20600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS20605 PF02525 Flavodoxin-like fold FIV04_RS20610 PF11471 Maltoporin periplasmic N-terminal extension FIV04_RS20610 PF02264 LamB porin FIV04_RS20615 PF00356 Bacterial regulatory proteins, lacI family FIV04_RS20620 PF02378 Phosphotransferase system, EIIC FIV04_RS20620 PF00367 phosphotransferase system, EIIB FIV04_RS20625 PF00294 pfkB family carbohydrate kinase FIV04_RS20630 PF00251 Glycosyl hydrolases family 32 N-terminal domain FIV04_RS20630 PF08244 Glycosyl hydrolases family 32 C terminal FIV04_RS20635 PF08787 Alginate lyase FIV04_RS20640 PF01979 Amidohydrolase family FIV04_RS20645 PF00132 Bacterial transferase hexapeptide (six repeats) FIV04_RS20650 PF02492 CobW/HypB/UreG, nucleotide-binding domain FIV04_RS20650 PF07683 Cobalamin synthesis protein cobW C-terminal domain FIV04_RS20655 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FIV04_RS20660 PF00005 ABC transporter FIV04_RS20660 PF00664 ABC transporter transmembrane region FIV04_RS20665 PF00005 ABC transporter FIV04_RS20665 PF00664 ABC transporter transmembrane region FIV04_RS20670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS20670 PF03466 LysR substrate binding domain FIV04_RS20675 PF00884 Sulfatase FIV04_RS20695 PF01476 LysM domain FIV04_RS20695 PF01551 Peptidase family M23 FIV04_RS20695 PF08525 Opacity-associated protein A N-terminal motif FIV04_RS20700 PF01906 Putative heavy-metal-binding FIV04_RS20705 PF03466 LysR substrate binding domain FIV04_RS20705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS20715 PF01966 HD domain FIV04_RS20715 PF11871 Domain of unknown function (DUF3391) FIV04_RS20740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV04_RS20745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS20745 PF03466 LysR substrate binding domain FIV04_RS20750 PF07690 Major Facilitator Superfamily FIV04_RS20765 PF00155 Aminotransferase class I and II FIV04_RS20770 PF08240 Alcohol dehydrogenase GroES-like domain FIV04_RS20770 PF00107 Zinc-binding dehydrogenase FIV04_RS20785 PF00999 Sodium/hydrogen exchanger family FIV04_RS20785 PF02254 TrkA-N domain FIV04_RS20790 PF02525 Flavodoxin-like fold FIV04_RS20815 PF00465 Iron-containing alcohol dehydrogenase FIV04_RS20820 PF13419 Haloacid dehalogenase-like hydrolase FIV04_RS20825 PF01590 GAF domain FIV04_RS20825 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS20825 PF00563 EAL domain FIV04_RS20825 PF00360 Phytochrome region FIV04_RS20830 PF00892 EamA-like transporter family FIV04_RS20840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS20840 PF03466 LysR substrate binding domain FIV04_RS20850 PF11230 Protein of unknown function (DUF3029) FIV04_RS20855 PF04055 Radical SAM superfamily FIV04_RS20870 PF01966 HD domain FIV04_RS20870 PF13286 Phosphohydrolase-associated domain FIV04_RS20880 PF02371 Transposase IS116/IS110/IS902 family FIV04_RS20880 PF01548 Transposase FIV04_RS20890 PF02371 Transposase IS116/IS110/IS902 family FIV04_RS20890 PF01548 Transposase FIV04_RS20915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS20915 PF03466 LysR substrate binding domain FIV04_RS20930 PF12805 FUSC-like inner membrane protein yccS FIV04_RS20935 PF12462 DNA helicase IV / RNA helicase N terminal FIV04_RS20935 PF00580 UvrD/REP helicase N-terminal domain FIV04_RS20935 PF13361 UvrD-like helicase C-terminal domain FIV04_RS20945 PF02142 MGS-like domain FIV04_RS20950 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FIV04_RS20955 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS20955 PF01627 Hpt domain FIV04_RS20955 PF00672 HAMP domain FIV04_RS20955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS20955 PF00072 Response regulator receiver domain FIV04_RS20965 PF07715 TonB-dependent Receptor Plug Domain FIV04_RS20965 PF00593 TonB dependent receptor FIV04_RS20970 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS20970 PF16750 Sensor domain of 2-component histidine kinase FIV04_RS20970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS20970 PF00672 HAMP domain FIV04_RS20975 PF00072 Response regulator receiver domain FIV04_RS20975 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS20980 PF18081 Fanconi anemia-associated nuclease SAP domain FIV04_RS20980 PF08774 VRR-NUC domain FIV04_RS20995 PF01844 HNH endonuclease FIV04_RS21000 PF02798 Glutathione S-transferase, N-terminal domain FIV04_RS21010 PF00672 HAMP domain FIV04_RS21010 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS21010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS21015 PF00072 Response regulator receiver domain FIV04_RS21015 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS21020 PF04116 Fatty acid hydroxylase superfamily FIV04_RS21035 PF13533 Biotin-lipoyl like FIV04_RS21040 PF00873 AcrB/AcrD/AcrF family FIV04_RS21050 PF02378 Phosphotransferase system, EIIC FIV04_RS21050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FIV04_RS21055 PF00294 pfkB family carbohydrate kinase FIV04_RS21060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FIV04_RS21060 PF00381 PTS HPr component phosphorylation site FIV04_RS21065 PF00356 Bacterial regulatory proteins, lacI family FIV04_RS21065 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FIV04_RS21070 PF00069 Protein kinase domain FIV04_RS21070 PF03793 PASTA domain FIV04_RS21075 PF07690 Major Facilitator Superfamily FIV04_RS21085 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FIV04_RS21085 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FIV04_RS21085 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS21085 PF18267 Rubredoxin NAD+ reductase C-terminal domain FIV04_RS21085 PF04324 BFD-like [2Fe-2S] binding domain FIV04_RS21085 PF13806 Rieske-like [2Fe-2S] domain FIV04_RS21090 PF01568 Molydopterin dinucleotide binding domain FIV04_RS21090 PF00384 Molybdopterin oxidoreductase FIV04_RS21090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FIV04_RS21190 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS21190 PF08521 Two-component sensor kinase N-terminal FIV04_RS21190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS21195 PF00072 Response regulator receiver domain FIV04_RS21195 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS21200 PF00873 AcrB/AcrD/AcrF family FIV04_RS21210 PF02321 Outer membrane efflux protein FIV04_RS21215 PF01810 LysE type translocator FIV04_RS21225 PF13411 MerR HTH family regulatory protein FIV04_RS21230 PF02627 Carboxymuconolactone decarboxylase family FIV04_RS21235 PF00583 Acetyltransferase (GNAT) family FIV04_RS21265 PF00267 Gram-negative porin FIV04_RS21275 PF03466 LysR substrate binding domain FIV04_RS21275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS21280 PF13533 Biotin-lipoyl like FIV04_RS21285 PF00873 AcrB/AcrD/AcrF family FIV04_RS21290 PF03466 LysR substrate binding domain FIV04_RS21290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS21300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS21300 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS21300 PF09308 LuxQ, periplasmic FIV04_RS21300 PF00072 Response regulator receiver domain FIV04_RS21305 PF00563 EAL domain FIV04_RS21305 PF08668 HDOD domain FIV04_RS21310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS21310 PF08447 PAS fold FIV04_RS21315 PF00356 Bacterial regulatory proteins, lacI family FIV04_RS21320 PF00294 pfkB family carbohydrate kinase FIV04_RS21325 PF13407 Periplasmic binding protein domain FIV04_RS21330 PF02653 Branched-chain amino acid transport system / permease component FIV04_RS21335 PF00005 ABC transporter FIV04_RS21340 PF05025 RbsD / FucU transport protein family FIV04_RS21375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV04_RS21380 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS21385 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV04_RS21385 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS21390 PF00005 ABC transporter FIV04_RS21390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV04_RS21395 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS21400 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV04_RS21400 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS21405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV04_RS21410 PF00005 ABC transporter FIV04_RS21410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV04_RS21415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV04_RS21415 PF00005 ABC transporter FIV04_RS21430 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS21430 PF00072 Response regulator receiver domain FIV04_RS21435 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS21435 PF13755 Sensor N-terminal transmembrane domain FIV04_RS21435 PF13756 Stimulus-sensing domain FIV04_RS21435 PF00672 HAMP domain FIV04_RS21435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS21450 PF00672 HAMP domain FIV04_RS21450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS21455 PF12849 PBP superfamily domain FIV04_RS21460 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS21465 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS21470 PF00005 ABC transporter FIV04_RS21485 PF17676 LD-carboxypeptidase C-terminal domain FIV04_RS21485 PF02016 LD-carboxypeptidase N-terminal domain FIV04_RS21490 PF03466 LysR substrate binding domain FIV04_RS21490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS21500 PF00171 Aldehyde dehydrogenase family FIV04_RS21510 PF02028 BCCT, betaine/carnitine/choline family transporter FIV04_RS21525 PF02321 Outer membrane efflux protein FIV04_RS21535 PF00873 AcrB/AcrD/AcrF family FIV04_RS21540 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS21540 PF00072 Response regulator receiver domain FIV04_RS21545 PF00672 HAMP domain FIV04_RS21545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS21545 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS21550 PF00561 alpha/beta hydrolase fold FIV04_RS21560 PF00034 Cytochrome c FIV04_RS21560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FIV04_RS21570 PF00115 Cytochrome C and Quinol oxidase polypeptide I FIV04_RS21580 PF00881 Nitroreductase family FIV04_RS21595 PF13673 Acetyltransferase (GNAT) domain FIV04_RS21610 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FIV04_RS21615 PF09308 LuxQ, periplasmic FIV04_RS21615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS21615 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS21615 PF00072 Response regulator receiver domain FIV04_RS21620 PF00034 Cytochrome c FIV04_RS21620 PF03150 Di-haem cytochrome c peroxidase FIV04_RS21625 PF00884 Sulfatase FIV04_RS21630 PF00884 Sulfatase FIV04_RS21640 PF17863 AAA lid domain FIV04_RS21640 PF07726 ATPase family associated with various cellular activities (AAA) FIV04_RS21655 PF13519 von Willebrand factor type A domain FIV04_RS21670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS21670 PF03466 LysR substrate binding domain FIV04_RS21675 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS21675 PF00563 EAL domain FIV04_RS21675 PF03707 Bacterial signalling protein N terminal repeat FIV04_RS21685 PF13407 Periplasmic binding protein domain FIV04_RS21695 PF03781 Sulfatase-modifying factor enzyme 1 FIV04_RS21700 PF13186 Iron-sulfur cluster-binding domain FIV04_RS21700 PF04055 Radical SAM superfamily FIV04_RS21720 PF00072 Response regulator receiver domain FIV04_RS21720 PF01627 Hpt domain FIV04_RS21720 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS21720 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FIV04_RS21720 PF00672 HAMP domain FIV04_RS21720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS21735 PF00005 ABC transporter FIV04_RS21735 PF00664 ABC transporter transmembrane region FIV04_RS21740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV04_RS21740 PF00529 HlyD membrane-fusion protein of T1SS FIV04_RS21765 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS21765 PF00072 Response regulator receiver domain FIV04_RS21770 PF01740 STAS domain FIV04_RS21775 PF00483 Nucleotidyl transferase FIV04_RS21810 PF00722 Glycosyl hydrolases family 16 FIV04_RS21835 PF13533 Biotin-lipoyl like FIV04_RS21840 PF03466 LysR substrate binding domain FIV04_RS21840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS21850 PF03150 Di-haem cytochrome c peroxidase FIV04_RS21855 PF00034 Cytochrome c FIV04_RS21855 PF03150 Di-haem cytochrome c peroxidase FIV04_RS21865 PF18465 Rieske 3Fe-4S FIV04_RS21865 PF00384 Molybdopterin oxidoreductase FIV04_RS21865 PF01568 Molydopterin dinucleotide binding domain FIV04_RS21890 PF03606 C4-dicarboxylate anaerobic carrier FIV04_RS21895 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FIV04_RS21910 PF07963 Prokaryotic N-terminal methylation motif FIV04_RS21920 PF01810 LysE type translocator FIV04_RS21925 PF01554 MatE FIV04_RS21935 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FIV04_RS21935 PF04324 BFD-like [2Fe-2S] binding domain FIV04_RS21935 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS21935 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FIV04_RS21935 PF18267 Rubredoxin NAD+ reductase C-terminal domain FIV04_RS21940 PF13806 Rieske-like [2Fe-2S] domain FIV04_RS21945 PF01226 Formate/nitrite transporter FIV04_RS21950 PF14824 Sirohaem biosynthesis protein central FIV04_RS21950 PF10414 Sirohaem synthase dimerisation region FIV04_RS21950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FIV04_RS21965 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS21965 PF00072 Response regulator receiver domain FIV04_RS21970 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS21970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS21970 PF00672 HAMP domain FIV04_RS21970 PF16527 Two-component sensor protein CpxA, periplasmic domain FIV04_RS21975 PF13188 PAS domain FIV04_RS21975 PF00563 EAL domain FIV04_RS21975 PF03707 Bacterial signalling protein N terminal repeat FIV04_RS21975 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS21980 PF00375 Sodium:dicarboxylate symporter family FIV04_RS21985 PF07715 TonB-dependent Receptor Plug Domain FIV04_RS21985 PF00593 TonB dependent receptor FIV04_RS21995 PF01618 MotA/TolQ/ExbB proton channel family FIV04_RS22000 PF01618 MotA/TolQ/ExbB proton channel family FIV04_RS22005 PF02472 Biopolymer transport protein ExbD/TolR FIV04_RS22010 PF03544 Gram-negative bacterial TonB protein C-terminal FIV04_RS22045 PF01297 Zinc-uptake complex component A periplasmic FIV04_RS22050 PF00005 ABC transporter FIV04_RS22055 PF00950 ABC 3 transport family FIV04_RS22070 PF11756 Nitrous oxide-stimulated promoter FIV04_RS22075 PF01554 MatE FIV04_RS22085 PF07690 Major Facilitator Superfamily FIV04_RS22090 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FIV04_RS22090 PF12833 Helix-turn-helix domain FIV04_RS22095 PF13193 AMP-binding enzyme C-terminal domain FIV04_RS22095 PF00501 AMP-binding enzyme FIV04_RS22100 PF05199 GMC oxidoreductase FIV04_RS22100 PF00732 GMC oxidoreductase FIV04_RS22105 PF00085 Thioredoxin FIV04_RS22110 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FIV04_RS22110 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FIV04_RS22125 PF03477 ATP cone domain FIV04_RS22125 PF13597 Anaerobic ribonucleoside-triphosphate reductase FIV04_RS22135 PF01554 MatE FIV04_RS22140 PF12833 Helix-turn-helix domain FIV04_RS22145 PF00155 Aminotransferase class I and II FIV04_RS22150 PF08443 RimK-like ATP-grasp domain FIV04_RS22150 PF18030 RimK PreATP-grasp domain FIV04_RS22155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS22155 PF02743 Cache domain FIV04_RS22155 PF00672 HAMP domain FIV04_RS22170 PF07685 CobB/CobQ-like glutamine amidotransferase domain FIV04_RS22170 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FIV04_RS22180 PF00528 Binding-protein-dependent transport system inner membrane component FIV04_RS22185 PF03459 TOBE domain FIV04_RS22185 PF00005 ABC transporter FIV04_RS22195 PF00563 EAL domain FIV04_RS22195 PF01590 GAF domain FIV04_RS22195 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS22195 PF00360 Phytochrome region FIV04_RS22205 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS22205 PF17158 Membrane-associated sensor, integral membrane domain FIV04_RS22220 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FIV04_RS22220 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FIV04_RS22220 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FIV04_RS22225 PF02233 NAD(P) transhydrogenase beta subunit FIV04_RS22235 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS22235 PF00072 Response regulator receiver domain FIV04_RS22250 PF03701 Uncharacterised protein family (UPF0181) FIV04_RS22255 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS22265 PF01253 Translation initiation factor SUI1 FIV04_RS22280 PF01820 D-ala D-ala ligase N-terminus FIV04_RS22280 PF07478 D-ala D-ala ligase C-terminus FIV04_RS22285 PF05036 Sporulation related domain FIV04_RS22290 PF13607 Succinyl-CoA ligase like flavodoxin domain FIV04_RS22290 PF13380 CoA binding domain FIV04_RS22290 PF00583 Acetyltransferase (GNAT) family FIV04_RS22295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS22295 PF03466 LysR substrate binding domain FIV04_RS22300 PF00593 TonB dependent receptor FIV04_RS22300 PF07715 TonB-dependent Receptor Plug Domain FIV04_RS22305 PF16363 GDP-mannose 4,6 dehydratase FIV04_RS22310 PF03746 LamB/YcsF family FIV04_RS22315 PF02682 Carboxyltransferase domain, subdomain C and D FIV04_RS22320 PF02626 Carboxyltransferase domain, subdomain A and B FIV04_RS22335 PF00005 ABC transporter FIV04_RS22340 PF13472 GDSL-like Lipase/Acylhydrolase family FIV04_RS22345 PF07055 Enoyl reductase FAD binding domain FIV04_RS22345 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FIV04_RS22345 PF12241 Trans-2-enoyl-CoA reductase catalytic region FIV04_RS22350 PF00498 FHA domain FIV04_RS22350 PF00563 EAL domain FIV04_RS22350 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS22360 PF01556 DnaJ C terminal domain FIV04_RS22360 PF00226 DnaJ domain FIV04_RS22360 PF00684 DnaJ central domain FIV04_RS22380 PF00892 EamA-like transporter family FIV04_RS22385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV04_RS22385 PF12793 Sugar transport-related sRNA regulator N-term FIV04_RS22395 PF03061 Thioesterase superfamily FIV04_RS22410 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FIV04_RS22415 PF12262 Bacterial virulence factor lipase N-terminal FIV04_RS22425 PF00270 DEAD/DEAH box helicase FIV04_RS22425 PF00271 Helicase conserved C-terminal domain FIV04_RS22440 PF03741 Integral membrane protein TerC family FIV04_RS22445 PF02872 5'-nucleotidase, C-terminal domain FIV04_RS22445 PF00149 Calcineurin-like phosphoesterase FIV04_RS22450 PF11398 Protein of unknown function (DUF2813) FIV04_RS22455 PF06496 Protein of unknown function (DUF1097) FIV04_RS22460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS22460 PF03466 LysR substrate binding domain FIV04_RS22465 PF01226 Formate/nitrite transporter FIV04_RS22470 PF04264 YceI-like domain FIV04_RS22475 PF01292 Prokaryotic cytochrome b561 FIV04_RS22490 PF00563 EAL domain FIV04_RS22490 PF12792 CSS motif domain associated with EAL FIV04_RS22495 PF00873 AcrB/AcrD/AcrF family FIV04_RS22500 PF13533 Biotin-lipoyl like FIV04_RS22505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV04_RS22515 PF00271 Helicase conserved C-terminal domain FIV04_RS22515 PF00270 DEAD/DEAH box helicase FIV04_RS22520 PF04336 Acyl carrier protein phosphodiesterase FIV04_RS22525 PF03222 Tryptophan/tyrosine permease family FIV04_RS22530 PF17200 Single Cache domain 2 FIV04_RS22530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS22530 PF00672 HAMP domain FIV04_RS22535 PF00873 AcrB/AcrD/AcrF family FIV04_RS22550 PF13419 Haloacid dehalogenase-like hydrolase FIV04_RS22565 PF00294 pfkB family carbohydrate kinase FIV04_RS22570 PF01268 Formate--tetrahydrofolate ligase FIV04_RS22575 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS22580 PF13419 Haloacid dehalogenase-like hydrolase FIV04_RS22585 PF00472 RF-1 domain FIV04_RS22605 PF08669 Glycine cleavage T-protein C-terminal barrel domain FIV04_RS22605 PF01571 Aminomethyltransferase folate-binding domain FIV04_RS22615 PF00464 Serine hydroxymethyltransferase FIV04_RS22620 PF01597 Glycine cleavage H-protein FIV04_RS22625 PF02347 Glycine cleavage system P-protein FIV04_RS22630 PF00144 Beta-lactamase FIV04_RS22640 PF09339 IclR helix-turn-helix domain FIV04_RS22640 PF01614 Bacterial transcriptional regulator FIV04_RS22645 PF00106 short chain dehydrogenase FIV04_RS22650 PF00593 TonB dependent receptor FIV04_RS22650 PF07715 TonB-dependent Receptor Plug Domain FIV04_RS22660 PF01032 FecCD transport family FIV04_RS22665 PF01032 FecCD transport family FIV04_RS22670 PF00005 ABC transporter FIV04_RS22680 PF02678 Pirin FIV04_RS22680 PF17954 Quercetinase C-terminal cupin domain FIV04_RS22685 PF07681 DoxX FIV04_RS22695 PF02423 Ornithine cyclodeaminase/mu-crystallin family FIV04_RS22700 PF01037 Lrp/AsnC ligand binding domain FIV04_RS22710 PF02743 Cache domain FIV04_RS22710 PF00672 HAMP domain FIV04_RS22710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS22715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS22720 PF02424 ApbE family FIV04_RS22725 PF00890 FAD binding domain FIV04_RS22725 PF04205 FMN-binding domain FIV04_RS22725 PF03358 NADPH-dependent FMN reductase FIV04_RS22735 PF03824 High-affinity nickel-transport protein FIV04_RS22740 PF06226 Protein of unknown function (DUF1007) FIV04_RS22750 PF13443 Cro/C1-type HTH DNA-binding domain FIV04_RS22770 PF00141 Peroxidase FIV04_RS22775 PF01568 Molydopterin dinucleotide binding domain FIV04_RS22775 PF18364 Molybdopterin oxidoreductase N-terminal domain FIV04_RS22775 PF00384 Molybdopterin oxidoreductase FIV04_RS22790 PF02028 BCCT, betaine/carnitine/choline family transporter FIV04_RS22795 PF13378 Enolase C-terminal domain-like FIV04_RS22795 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FIV04_RS22800 PF00890 FAD binding domain FIV04_RS22800 PF04205 FMN-binding domain FIV04_RS22805 PF07729 FCD domain FIV04_RS22805 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS22815 PF03466 LysR substrate binding domain FIV04_RS22815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS22820 PF01227 GTP cyclohydrolase I FIV04_RS22820 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FIV04_RS22825 PF02152 Dihydroneopterin aldolase FIV04_RS22830 PF01227 GTP cyclohydrolase I FIV04_RS22845 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FIV04_RS22850 PF01575 MaoC like domain FIV04_RS22870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV04_RS22870 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FIV04_RS22880 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV04_RS22885 PF00171 Aldehyde dehydrogenase family FIV04_RS22890 PF00202 Aminotransferase class-III FIV04_RS22895 PF03466 LysR substrate binding domain FIV04_RS22895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS22905 PF00753 Metallo-beta-lactamase superfamily FIV04_RS22905 PF14863 Alkyl sulfatase dimerisation FIV04_RS22905 PF14864 Alkyl sulfatase C-terminal FIV04_RS22910 PF12833 Helix-turn-helix domain FIV04_RS22910 PF14525 AraC-binding-like domain FIV04_RS22920 PF09234 Domain of unknown function (DUF1963) FIV04_RS22930 PF03358 NADPH-dependent FMN reductase FIV04_RS22935 PF03466 LysR substrate binding domain FIV04_RS22935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS22940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS22940 PF03466 LysR substrate binding domain FIV04_RS22955 PF00158 Sigma-54 interaction domain FIV04_RS22955 PF01590 GAF domain FIV04_RS22980 PF03466 LysR substrate binding domain FIV04_RS22980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS22985 PF00291 Pyridoxal-phosphate dependent enzyme FIV04_RS22990 PF08361 MAATS-type transcriptional repressor, C-terminal region FIV04_RS22990 PF00440 Bacterial regulatory proteins, tetR family FIV04_RS23000 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS23000 PF00072 Response regulator receiver domain FIV04_RS23015 PF13378 Enolase C-terminal domain-like FIV04_RS23015 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FIV04_RS23035 PF02472 Biopolymer transport protein ExbD/TolR FIV04_RS23040 PF01618 MotA/TolQ/ExbB proton channel family FIV04_RS23045 PF05992 SbmA/BacA-like family FIV04_RS23060 PF13614 AAA domain FIV04_RS23065 PF02195 ParB-like nuclease domain FIV04_RS23065 PF08775 ParB family FIV04_RS23100 PF00875 DNA photolyase FIV04_RS23100 PF03441 FAD binding domain of DNA photolyase FIV04_RS23110 PF00593 TonB dependent receptor FIV04_RS23110 PF07715 TonB-dependent Receptor Plug Domain FIV04_RS23125 PF12833 Helix-turn-helix domain FIV04_RS23130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV04_RS23140 PF12833 Helix-turn-helix domain FIV04_RS23150 PF01256 Carbohydrate kinase FIV04_RS23150 PF03853 YjeF-related protein N-terminus FIV04_RS23160 PF01638 HxlR-like helix-turn-helix FIV04_RS23195 PF00356 Bacterial regulatory proteins, lacI family FIV04_RS23230 PF02837 Glycosyl hydrolases family 2, sugar binding domain FIV04_RS23230 PF02929 Beta galactosidase small chain FIV04_RS23230 PF16353 Domain of unknown function(DUF4981) FIV04_RS23230 PF00703 Glycosyl hydrolases family 2 FIV04_RS23230 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FIV04_RS23240 PF02264 LamB porin FIV04_RS23250 PF16875 Glycosyl hydrolase family 36 N-terminal domain FIV04_RS23250 PF16874 Glycosyl hydrolase family 36 C-terminal domain FIV04_RS23260 PF01638 HxlR-like helix-turn-helix FIV04_RS23270 PF01654 Cytochrome bd terminal oxidase subunit I FIV04_RS23275 PF02322 Cytochrome bd terminal oxidase subunit II FIV04_RS23280 PF03334 Na+/H+ antiporter subunit FIV04_RS23285 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FIV04_RS23290 PF01899 Na+/H+ ion antiporter subunit FIV04_RS23295 PF00361 Proton-conducting membrane transporter FIV04_RS23300 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FIV04_RS23305 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FIV04_RS23305 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FIV04_RS23305 PF13244 Domain of unknown function (DUF4040) FIV04_RS23305 PF00361 Proton-conducting membrane transporter FIV04_RS23315 PF00582 Universal stress protein family FIV04_RS23325 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS23325 PF08448 PAS fold FIV04_RS23340 PF03466 LysR substrate binding domain FIV04_RS23340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS23365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FIV04_RS23370 PF03466 LysR substrate binding domain FIV04_RS23370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS23375 PF03466 LysR substrate binding domain FIV04_RS23375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS23385 PF00892 EamA-like transporter family FIV04_RS23390 PF03466 LysR substrate binding domain FIV04_RS23390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS23400 PF00106 short chain dehydrogenase FIV04_RS23405 PF01810 LysE type translocator FIV04_RS23425 PF00117 Glutamine amidotransferase class-I FIV04_RS23430 PF12852 Cupin FIV04_RS23430 PF12833 Helix-turn-helix domain FIV04_RS23435 PF12833 Helix-turn-helix domain FIV04_RS23435 PF02311 AraC-like ligand binding domain FIV04_RS23450 PF16363 GDP-mannose 4,6 dehydratase FIV04_RS23455 PF03466 LysR substrate binding domain FIV04_RS23455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS23465 PF00082 Subtilase family FIV04_RS23465 PF05922 Peptidase inhibitor I9 FIV04_RS23480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS23480 PF03466 LysR substrate binding domain FIV04_RS23485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS23485 PF03466 LysR substrate binding domain FIV04_RS23490 PF05368 NmrA-like family FIV04_RS23505 PF00171 Aldehyde dehydrogenase family FIV04_RS23515 PF00881 Nitroreductase family FIV04_RS23520 PF03466 LysR substrate binding domain FIV04_RS23520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS23535 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS23535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV04_RS23545 PF04143 Sulphur transport FIV04_RS23575 PF01797 Transposase IS200 like FIV04_RS23660 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FIV04_RS23675 PF01906 Putative heavy-metal-binding FIV04_RS23685 PF03466 LysR substrate binding domain FIV04_RS23685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS23780 PF01548 Transposase FIV04_RS23780 PF02371 Transposase IS116/IS110/IS902 family FIV04_RS23805 PF13361 UvrD-like helicase C-terminal domain FIV04_RS23805 PF00580 UvrD/REP helicase N-terminal domain FIV04_RS23805 PF12462 DNA helicase IV / RNA helicase N terminal FIV04_RS23825 PF00293 NUDIX domain FIV04_RS23865 PF04463 Protein of unknown function (DUF523) FIV04_RS23880 PF00132 Bacterial transferase hexapeptide (six repeats) FIV04_RS23885 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS23890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV04_RS23890 PF00529 HlyD membrane-fusion protein of T1SS FIV04_RS23900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS23900 PF03466 LysR substrate binding domain FIV04_RS23910 PF00873 AcrB/AcrD/AcrF family FIV04_RS23915 PF02321 Outer membrane efflux protein FIV04_RS23930 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FIV04_RS23935 PF13188 PAS domain FIV04_RS23935 PF00563 EAL domain FIV04_RS23935 PF03707 Bacterial signalling protein N terminal repeat FIV04_RS23935 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS23945 PF12706 Beta-lactamase superfamily domain FIV04_RS23950 PF00171 Aldehyde dehydrogenase family FIV04_RS23960 PF00465 Iron-containing alcohol dehydrogenase FIV04_RS23965 PF02743 Cache domain FIV04_RS23965 PF00672 HAMP domain FIV04_RS23965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS23975 PF01810 LysE type translocator FIV04_RS23980 PF03466 LysR substrate binding domain FIV04_RS23980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS23985 PF12697 Alpha/beta hydrolase family FIV04_RS23995 PF01638 HxlR-like helix-turn-helix FIV04_RS24010 PF00294 pfkB family carbohydrate kinase FIV04_RS24015 PF01156 Inosine-uridine preferring nucleoside hydrolase FIV04_RS24020 PF00962 Adenosine/AMP deaminase FIV04_RS24040 PF00561 alpha/beta hydrolase fold FIV04_RS24045 PF17200 Single Cache domain 2 FIV04_RS24045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS24045 PF00672 HAMP domain FIV04_RS24075 PF00106 short chain dehydrogenase FIV04_RS24085 PF07715 TonB-dependent Receptor Plug Domain FIV04_RS24085 PF00593 TonB dependent receptor FIV04_RS24090 PF00756 Putative esterase FIV04_RS24090 PF11806 Domain of unknown function (DUF3327) FIV04_RS24095 PF12833 Helix-turn-helix domain FIV04_RS24100 PF01266 FAD dependent oxidoreductase FIV04_RS24110 PF03466 LysR substrate binding domain FIV04_RS24110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS24125 PF01928 CYTH domain FIV04_RS24135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS24135 PF00072 Response regulator receiver domain FIV04_RS24135 PF09308 LuxQ, periplasmic FIV04_RS24135 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS24145 PF12802 MarR family FIV04_RS24150 PF01965 DJ-1/PfpI family FIV04_RS24155 PF02901 Pyruvate formate lyase-like FIV04_RS24155 PF01228 Glycine radical FIV04_RS24185 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS24205 PF07963 Prokaryotic N-terminal methylation motif FIV04_RS24215 PF00672 HAMP domain FIV04_RS24215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS24215 PF02743 Cache domain FIV04_RS24245 PF00672 HAMP domain FIV04_RS24245 PF01966 HD domain FIV04_RS24260 PF03466 LysR substrate binding domain FIV04_RS24260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS24265 PF13460 NAD(P)H-binding FIV04_RS24270 PF02311 AraC-like ligand binding domain FIV04_RS24270 PF12833 Helix-turn-helix domain FIV04_RS24280 PF00860 Permease family FIV04_RS24285 PF00873 AcrB/AcrD/AcrF family FIV04_RS24295 PF00196 Bacterial regulatory proteins, luxR family FIV04_RS24295 PF03472 Autoinducer binding domain FIV04_RS24305 PF02311 AraC-like ligand binding domain FIV04_RS24305 PF12833 Helix-turn-helix domain FIV04_RS24315 PF00950 ABC 3 transport family FIV04_RS24320 PF00005 ABC transporter FIV04_RS24345 PF00593 TonB dependent receptor FIV04_RS24345 PF07715 TonB-dependent Receptor Plug Domain FIV04_RS24375 PF00474 Sodium:solute symporter family FIV04_RS24380 PF16875 Glycosyl hydrolase family 36 N-terminal domain FIV04_RS24380 PF16874 Glycosyl hydrolase family 36 C-terminal domain FIV04_RS24385 PF00356 Bacterial regulatory proteins, lacI family FIV04_RS24400 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FIV04_RS24400 PF12833 Helix-turn-helix domain FIV04_RS24415 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS24415 PF00155 Aminotransferase class I and II FIV04_RS24435 PF02525 Flavodoxin-like fold FIV04_RS24445 PF14863 Alkyl sulfatase dimerisation FIV04_RS24445 PF00753 Metallo-beta-lactamase superfamily FIV04_RS24445 PF14864 Alkyl sulfatase C-terminal FIV04_RS24450 PF03466 LysR substrate binding domain FIV04_RS24450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS24465 PF01032 FecCD transport family FIV04_RS24490 PF04229 GrpB protein FIV04_RS24510 PF00873 AcrB/AcrD/AcrF family FIV04_RS24515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV04_RS24515 PF00529 HlyD membrane-fusion protein of T1SS FIV04_RS24520 PF00440 Bacterial regulatory proteins, tetR family FIV04_RS24530 PF00583 Acetyltransferase (GNAT) family FIV04_RS24535 PF01925 Sulfite exporter TauE/SafE FIV04_RS24545 PF08267 Cobalamin-independent synthase, N-terminal domain FIV04_RS24545 PF01717 Cobalamin-independent synthase, Catalytic domain FIV04_RS24575 PF02311 AraC-like ligand binding domain FIV04_RS24575 PF12833 Helix-turn-helix domain FIV04_RS24585 PF00768 D-alanyl-D-alanine carboxypeptidase FIV04_RS24585 PF07943 Penicillin-binding protein 5, C-terminal domain FIV04_RS24590 PF02875 Mur ligase family, glutamate ligase domain FIV04_RS24590 PF01225 Mur ligase family, catalytic domain FIV04_RS24590 PF08245 Mur ligase middle domain FIV04_RS24595 PF03466 LysR substrate binding domain FIV04_RS24595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS24605 PF00106 short chain dehydrogenase FIV04_RS24615 PF00107 Zinc-binding dehydrogenase FIV04_RS24615 PF08240 Alcohol dehydrogenase GroES-like domain FIV04_RS24620 PF03466 LysR substrate binding domain FIV04_RS24620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS24630 PF00563 EAL domain FIV04_RS24630 PF05231 MASE1 FIV04_RS24635 PF03466 LysR substrate binding domain FIV04_RS24635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS24655 PF02595 Glycerate kinase family FIV04_RS24660 PF02056 Family 4 glycosyl hydrolase FIV04_RS24660 PF11975 Family 4 glycosyl hydrolase C-terminal domain FIV04_RS24665 PF02378 Phosphotransferase system, EIIC FIV04_RS24665 PF00367 phosphotransferase system, EIIB FIV04_RS24670 PF07702 UTRA domain FIV04_RS24670 PF00392 Bacterial regulatory proteins, gntR family FIV04_RS24675 PF00005 ABC transporter FIV04_RS24680 PF01032 FecCD transport family FIV04_RS24685 PF01032 FecCD transport family FIV04_RS24690 PF01497 Periplasmic binding protein FIV04_RS24695 PF07715 TonB-dependent Receptor Plug Domain FIV04_RS24695 PF00593 TonB dependent receptor FIV04_RS24695 PF07660 Secretin and TonB N terminus short domain FIV04_RS24700 PF07715 TonB-dependent Receptor Plug Domain FIV04_RS24700 PF00593 TonB dependent receptor FIV04_RS24705 PF00206 Lyase FIV04_RS24705 PF02655 ATP-grasp domain FIV04_RS24720 PF06276 Ferric iron reductase FhuF-like transporter FIV04_RS24720 PF04183 IucA / IucC family FIV04_RS24725 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FIV04_RS24725 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FIV04_RS24730 PF13673 Acetyltransferase (GNAT) domain FIV04_RS24750 PF08240 Alcohol dehydrogenase GroES-like domain FIV04_RS24750 PF00107 Zinc-binding dehydrogenase FIV04_RS24765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIV04_RS24765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIV04_RS24775 PF01872 RibD C-terminal domain FIV04_RS24775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FIV04_RS24790 PF13302 Acetyltransferase (GNAT) domain FIV04_RS24810 PF01784 NIF3 (NGG1p interacting factor 3) FIV04_RS24835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV04_RS24850 PF02540 NAD synthase FIV04_RS24850 PF00795 Carbon-nitrogen hydrolase FIV04_RS24865 PF00248 Aldo/keto reductase family FIV04_RS24885 PF02525 Flavodoxin-like fold FIV04_RS24890 PF01661 Macro domain FIV04_RS24905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS24905 PF03466 LysR substrate binding domain FIV04_RS24920 PF02743 Cache domain FIV04_RS24920 PF00672 HAMP domain FIV04_RS24920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS24925 PF12146 Serine aminopeptidase, S33 FIV04_RS24950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS24950 PF03466 LysR substrate binding domain FIV04_RS24960 PF02625 XdhC and CoxI family FIV04_RS24960 PF13478 XdhC Rossmann domain FIV04_RS24965 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FIV04_RS24970 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV04_RS24970 PF01799 [2Fe-2S] binding domain FIV04_RS24990 PF01645 Conserved region in glutamate synthase FIV04_RS24995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV04_RS25010 PF01797 Transposase IS200 like FIV04_RS25020 PF03466 LysR substrate binding domain FIV04_RS25020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS25025 PF00210 Ferritin-like domain FIV04_RS25045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV04_RS25045 PF03466 LysR substrate binding domain FIV04_RS25060 PF02567 Phenazine biosynthesis-like protein FIV04_RS25065 PF08534 Redoxin FIV04_RS25070 PF07690 Major Facilitator Superfamily FIV04_RS25075 PF00578 AhpC/TSA family FIV04_RS25075 PF10417 C-terminal domain of 1-Cys peroxiredoxin FIV04_RS25085 PF13411 MerR HTH family regulatory protein FIV04_RS25095 PF01547 Bacterial extracellular solute-binding protein FIV04_RS25100 PF00672 HAMP domain FIV04_RS25100 PF12729 Four helix bundle sensory module for signal transduction FIV04_RS25100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS25105 PF00465 Iron-containing alcohol dehydrogenase FIV04_RS25110 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FIV04_RS25110 PF00356 Bacterial regulatory proteins, lacI family FIV04_RS25115 PF00294 pfkB family carbohydrate kinase FIV04_RS25120 PF00571 CBS domain FIV04_RS25120 PF01380 SIS domain FIV04_RS25125 PF03928 Haem-degrading FIV04_RS25130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FIV04_RS25130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV04_RS25135 PF05524 PEP-utilising enzyme, N-terminal FIV04_RS25135 PF00391 PEP-utilising enzyme, mobile domain FIV04_RS25135 PF02896 PEP-utilising enzyme, TIM barrel domain FIV04_RS25135 PF00381 PTS HPr component phosphorylation site FIV04_RS25135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FIV04_RS25145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FIV04_RS25150 PF02901 Pyruvate formate lyase-like FIV04_RS25150 PF01228 Glycine radical FIV04_RS25155 PF04055 Radical SAM superfamily FIV04_RS25165 PF00923 Transaldolase/Fructose-6-phosphate aldolase FIV04_RS25170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FIV04_RS25175 PF12833 Helix-turn-helix domain FIV04_RS25185 PF01238 Phosphomannose isomerase type I FIV04_RS25220 PF00899 ThiF family FIV04_RS25220 PF14461 Prokaryotic E2 family B FIV04_RS25230 PF03120 NAD-dependent DNA ligase OB-fold domain FIV04_RS25230 PF01653 NAD-dependent DNA ligase adenylation domain FIV04_RS25230 PF00533 BRCA1 C Terminus (BRCT) domain FIV04_RS25255 PF04539 Sigma-70 region 3 FIV04_RS25255 PF04542 Sigma-70 region 2 FIV04_RS25255 PF04545 Sigma-70, region 4 FIV04_RS25255 PF00140 Sigma-70 factor, region 1.2 FIV04_RS25260 PF04994 TfoX C-terminal domain FIV04_RS25260 PF04993 TfoX N-terminal domain FIV04_RS25310 PF04381 Putative exonuclease, RdgC FIV04_RS25320 PF06750 Bacterial Peptidase A24 N-terminal domain FIV04_RS25320 PF01478 Type IV leader peptidase family FIV04_RS25400 PF00589 Phage integrase family FIV04_RS25400 PF02899 Phage integrase, N-terminal SAM-like domain FIV04_RS25445 PF00145 C-5 cytosine-specific DNA methylase FIV04_RS25465 PF00873 AcrB/AcrD/AcrF family FIV04_RS25470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV04_RS25485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS25485 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS25485 PF00672 HAMP domain FIV04_RS25490 PF00072 Response regulator receiver domain FIV04_RS25490 PF00486 Transcriptional regulatory protein, C terminal FIV04_RS25515 PF00403 Heavy-metal-associated domain FIV04_RS25520 PF13411 MerR HTH family regulatory protein FIV04_RS25545 PF00072 Response regulator receiver domain FIV04_RS25545 PF09308 LuxQ, periplasmic FIV04_RS25545 PF00512 His Kinase A (phospho-acceptor) domain FIV04_RS25545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV04_RS25620 PF02768 DNA polymerase III beta subunit, C-terminal domain FIV04_RS25620 PF02767 DNA polymerase III beta subunit, central domain FIV04_RS25620 PF00712 DNA polymerase III beta subunit, N-terminal domain FIV04_RS25720 PF01751 Toprim domain FIV04_RS25720 PF01131 DNA topoisomerase FIV04_RS25755 PF00437 Type II/IV secretion system protein FIV04_RS25780 PF10411 Disulfide bond isomerase protein N-terminus FIV04_RS25780 PF13098 Thioredoxin-like domain FIV04_RS25885 PF00436 Single-strand binding protein family FIV04_RS25970 PF01850 PIN domain FIV04_RS25975 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FIV04_RS26015 PF01381 Helix-turn-helix FIV04_RS26015 PF00145 C-5 cytosine-specific DNA methylase FIV04_RS26095 PF02796 Helix-turn-helix domain of resolvase FIV04_RS26095 PF00239 Resolvase, N terminal domain FIV04_RS26100 PF00239 Resolvase, N terminal domain FIV04_RS26100 PF02796 Helix-turn-helix domain of resolvase FIV04_RS26105 PF09278 MerR, DNA binding FIV04_RS26105 PF00376 MerR family regulatory protein FIV04_RS26110 PF02411 MerT mercuric transport protein FIV04_RS26115 PF00403 Heavy-metal-associated domain FIV04_RS26125 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS26125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV04_RS26125 PF00403 Heavy-metal-associated domain FIV04_RS26130 PF01526 Tn3 transposase DDE domain FIV04_RS26130 PF13700 Domain of unknown function (DUF4158) FIV04_RS26155 PF16363 GDP-mannose 4,6 dehydratase FIV04_RS26160 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FIV04_RS26160 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FIV04_RS26165 PF08544 GHMP kinases C terminal FIV04_RS26165 PF00288 GHMP kinases N terminal domain FIV04_RS26165 PF10509 Galactokinase galactose-binding signature FIV04_RS26175 PF13322 Domain of unknown function (DUF4092) FIV04_RS26175 PF17291 N-terminal domain of M60-like peptidases FIV04_RS26175 PF13402 Peptidase M60, enhancin and enhancin-like FIV04_RS26185 PF07963 Prokaryotic N-terminal methylation motif FIV04_RS26205 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS26210 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS26230 PF08775 ParB family FIV04_RS26230 PF02195 ParB-like nuclease domain FIV04_RS26265 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system FIV04_RS26270 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system FIV04_RS26290 PF01223 DNA/RNA non-specific endonuclease FIV04_RS26340 PF00239 Resolvase, N terminal domain FIV04_RS26340 PF02796 Helix-turn-helix domain of resolvase FIV04_RS26360 PF02253 Phospholipase A1 FIV04_RS26400 PF00990 Diguanylate cyclase, GGDEF domain FIV04_RS26400 PF17151 Periplasmic sensor domain FIV04_RS26410 PF11849 Domain of unknown function (DUF3369) FIV04_RS26465 PF12833 Helix-turn-helix domain FIV04_RS26470 PF01263 Aldose 1-epimerase FIV04_RS26480 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FIV04_RS26500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV04_RS26500 PF00672 HAMP domain FIV04_RS26515 PF01966 HD domain FIV04_RS26515 PF00672 HAMP domain FIV04_RS26550 PF00239 Resolvase, N terminal domain FIV04_RS26550 PF02796 Helix-turn-helix domain of resolvase FIV04_RS26555 PF00376 MerR family regulatory protein FIV04_RS26555 PF09278 MerR, DNA binding FIV04_RS26560 PF02411 MerT mercuric transport protein FIV04_RS26565 PF00403 Heavy-metal-associated domain FIV04_RS26575 PF00403 Heavy-metal-associated domain FIV04_RS26575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV04_RS26575 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS26580 PF13700 Domain of unknown function (DUF4158) FIV04_RS26580 PF01526 Tn3 transposase DDE domain FIV04_RS26600 PF00226 DnaJ domain FIV04_RS26600 PF01556 DnaJ C terminal domain FIV04_RS26600 PF00684 DnaJ central domain FIV04_RS26675 PF13614 AAA domain FIV04_RS26770 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer FIV04_RS26785 PF06834 TraU protein FIV04_RS26795 PF06986 Type-1V conjugative transfer system mating pair stabilisation FIV04_RS26800 PF13728 F plasmid transfer operon protein FIV04_RS26810 PF06122 Conjugative relaxosome accessory transposon protein FIV04_RS26830 PF12615 F sex factor protein N terminal FIV04_RS26830 PF10412 Type IV secretion-system coupling protein DNA-binding domain FIV04_RS26840 PF00239 Resolvase, N terminal domain FIV04_RS26840 PF02796 Helix-turn-helix domain of resolvase FIV04_RS26845 PF09278 MerR, DNA binding FIV04_RS26845 PF00376 MerR family regulatory protein FIV04_RS26850 PF02411 MerT mercuric transport protein FIV04_RS26855 PF00403 Heavy-metal-associated domain FIV04_RS26865 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV04_RS26865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV04_RS26865 PF00403 Heavy-metal-associated domain FIV04_RS26870 PF01526 Tn3 transposase DDE domain FIV04_RS26870 PF13700 Domain of unknown function (DUF4158)