locus-tag class description LTQ54_RS00015 PF10672 S-adenosylmethionine-dependent methyltransferase LTQ54_RS00015 PF17785 PUA-like domain LTQ54_RS00020 PF12729 Four helix bundle sensory module for signal transduction LTQ54_RS00020 PF00672 HAMP domain LTQ54_RS00020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS00025 PF00708 Acylphosphatase LTQ54_RS00030 PF04358 DsrC like protein LTQ54_RS00035 PF01027 Inhibitor of apoptosis-promoting Bax1 LTQ54_RS00040 PF00005 ABC transporter LTQ54_RS00045 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS00050 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS00055 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_RS00060 PF10414 Sirohaem synthase dimerisation region LTQ54_RS00060 PF14824 Sirohaem biosynthesis protein central LTQ54_RS00060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LTQ54_RS00065 PF04461 Protein of unknown function (DUF520) LTQ54_RS00070 PF00793 DAHP synthetase I family LTQ54_RS00075 PF02896 PEP-utilising enzyme, TIM barrel domain LTQ54_RS00075 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LTQ54_RS00075 PF00391 PEP-utilising enzyme, mobile domain LTQ54_RS00090 PF13509 S1 domain LTQ54_RS00090 PF17783 CvfB-like winged helix domain LTQ54_RS00095 PF01189 16S rRNA methyltransferase RsmB/F LTQ54_RS00095 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF LTQ54_RS00095 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LTQ54_RS00100 PF02470 MlaD protein LTQ54_RS00105 PF04403 Paraquat-inducible protein A LTQ54_RS00110 PF00005 ABC transporter LTQ54_RS00110 PF00664 ABC transporter transmembrane region LTQ54_RS00115 PF13185 GAF domain LTQ54_RS00120 PF04352 ProQ/FINO family LTQ54_RS00120 PF17516 ProQ C-terminal domain LTQ54_RS00125 PF03572 Peptidase family S41 LTQ54_RS00125 PF17804 Tail specific protease N-terminal domain LTQ54_RS00125 PF11818 C-terminal domain of tail specific protease (DUF3340) LTQ54_RS00125 PF00595 PDZ domain LTQ54_RS00135 PF01433 Peptidase family M1 domain LTQ54_RS00135 PF11940 Domain of unknown function (DUF3458) Ig-like fold LTQ54_RS00135 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LTQ54_RS00145 PF05088 Bacterial NAD-glutamate dehydrogenase LTQ54_RS00150 PF01180 Dihydroorotate dehydrogenase LTQ54_RS00155 PF07126 Cell-division protein ZapC LTQ54_RS00160 PF10672 S-adenosylmethionine-dependent methyltransferase LTQ54_RS00160 PF01170 Putative RNA methylase family UPF0020 LTQ54_RS00160 PF02926 THUMP domain LTQ54_RS00170 PF12848 ABC transporter LTQ54_RS00170 PF16326 ABC transporter C-terminal domain LTQ54_RS00170 PF00005 ABC transporter LTQ54_RS00180 PF04957 Ribosome modulation factor LTQ54_RS00185 PF07977 FabA-like domain LTQ54_RS00190 PF05362 Lon protease (S16) C-terminal proteolytic domain LTQ54_RS00190 PF13654 AAA domain LTQ54_RS00195 PF17414 MatP C-terminal ribbon-helix-helix domain LTQ54_RS00195 PF06303 MatP N-terminal domain LTQ54_RS00300 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS00300 PF09308 LuxQ, periplasmic LTQ54_RS00300 PF00072 Response regulator receiver domain LTQ54_RS00300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS00315 PF00115 Cytochrome C and Quinol oxidase polypeptide I LTQ54_RS00330 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LTQ54_RS00330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LTQ54_RS00340 PF00403 Heavy-metal-associated domain LTQ54_RS00355 PF00027 Cyclic nucleotide-binding domain LTQ54_RS00355 PF13545 Crp-like helix-turn-helix domain LTQ54_RS00360 PF00582 Universal stress protein family LTQ54_RS00365 PF01171 PP-loop family LTQ54_RS00385 PF00005 ABC transporter LTQ54_RS00385 PF08402 TOBE domain LTQ54_RS00390 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS00395 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS00400 PF13416 Bacterial extracellular solute-binding protein LTQ54_RS00405 PF13416 Bacterial extracellular solute-binding protein LTQ54_RS00415 PF02146 Sir2 family LTQ54_RS00420 PF00909 Ammonium Transporter Family LTQ54_RS00435 PF13247 4Fe-4S dicluster domain LTQ54_RS00440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LTQ54_RS00440 PF01568 Molydopterin dinucleotide binding domain LTQ54_RS00440 PF00384 Molybdopterin oxidoreductase LTQ54_RS00450 PF02613 Nitrate reductase delta subunit LTQ54_RS00470 PF02634 FdhD/NarQ family LTQ54_RS00475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS00475 PF00672 HAMP domain LTQ54_RS00480 PF12848 ABC transporter LTQ54_RS00480 PF00005 ABC transporter LTQ54_RS00495 PF08269 Cache domain LTQ54_RS00495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS00500 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS00505 PF00158 Sigma-54 interaction domain LTQ54_RS00505 PF00072 Response regulator receiver domain LTQ54_RS00505 PF02954 Bacterial regulatory protein, Fis family LTQ54_RS00510 PF12849 PBP superfamily domain LTQ54_RS00515 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS00520 PF00005 ABC transporter LTQ54_RS00520 PF08402 TOBE domain LTQ54_RS00525 PF12804 MobA-like NTP transferase domain LTQ54_RS00530 PF03453 MoeA N-terminal region (domain I and II) LTQ54_RS00530 PF03454 MoeA C-terminal region (domain IV) LTQ54_RS00530 PF00994 Probable molybdopterin binding domain LTQ54_RS00540 PF00480 ROK family LTQ54_RS00545 PF03942 DTW domain LTQ54_RS00555 PF02743 Cache domain LTQ54_RS00555 PF00672 HAMP domain LTQ54_RS00555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS00560 PF00877 NlpC/P60 family LTQ54_RS00570 PF03881 Fructosamine kinase LTQ54_RS00580 PF00677 Lumazine binding domain LTQ54_RS00585 PF01554 MatE LTQ54_RS00590 PF01068 ATP dependent DNA ligase domain LTQ54_RS00590 PF14743 DNA ligase OB-like domain LTQ54_RS00600 PF00691 OmpA family LTQ54_RS00620 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS00625 PF00571 CBS domain LTQ54_RS00625 PF00005 ABC transporter LTQ54_RS00635 PF00158 Sigma-54 interaction domain LTQ54_RS00635 PF00072 Response regulator receiver domain LTQ54_RS00635 PF02954 Bacterial regulatory protein, Fis family LTQ54_RS00640 PF00534 Glycosyl transferases group 1 LTQ54_RS00640 PF13439 Glycosyltransferase Family 4 LTQ54_RS00665 PF13439 Glycosyltransferase Family 4 LTQ54_RS00665 PF00534 Glycosyl transferases group 1 LTQ54_RS00675 PF02397 Bacterial sugar transferase LTQ54_RS00680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS00680 PF03466 LysR substrate binding domain LTQ54_RS00690 PF00873 AcrB/AcrD/AcrF family LTQ54_RS00695 PF02321 Outer membrane efflux protein LTQ54_RS00705 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LTQ54_RS00780 PF08241 Methyltransferase domain LTQ54_RS00800 PF13419 Haloacid dehalogenase-like hydrolase LTQ54_RS00845 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS00850 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS00855 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_RS00860 PF00005 ABC transporter LTQ54_RS00865 PF00664 ABC transporter transmembrane region LTQ54_RS00865 PF00005 ABC transporter LTQ54_RS00875 PF01609 Transposase DDE domain LTQ54_RS00875 PF13006 Insertion element 4 transposase N-terminal LTQ54_RS00880 PF12392 Collagenase LTQ54_RS00880 PF01136 Peptidase family U32 LTQ54_RS00895 PF03616 Sodium/glutamate symporter LTQ54_RS00925 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_RS00940 PF13419 Haloacid dehalogenase-like hydrolase LTQ54_RS00945 PF02810 SEC-C motif LTQ54_RS00945 PF07517 SecA DEAD-like domain LTQ54_RS00945 PF01043 SecA preprotein cross-linking domain LTQ54_RS00945 PF07516 SecA Wing and Scaffold domain LTQ54_RS00965 PF02016 LD-carboxypeptidase N-terminal domain LTQ54_RS00965 PF17676 LD-carboxypeptidase C-terminal domain LTQ54_RS00985 PF00583 Acetyltransferase (GNAT) family LTQ54_RS00995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LTQ54_RS01045 PF00293 NUDIX domain LTQ54_RS01055 PF08264 Anticodon-binding domain of tRNA LTQ54_RS01055 PF09334 tRNA synthetases class I (M) LTQ54_RS01055 PF01588 Putative tRNA binding domain LTQ54_RS01070 PF03737 Aldolase/RraA LTQ54_RS01110 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_RS01110 PF12464 Maltose acetyltransferase LTQ54_RS01120 PF00849 RNA pseudouridylate synthase LTQ54_RS01120 PF01479 S4 domain LTQ54_RS01135 PF00293 NUDIX domain LTQ54_RS01155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LTQ54_RS01155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LTQ54_RS01165 PF03009 Glycerophosphoryl diester phosphodiesterase family LTQ54_RS01170 PF07690 Major Facilitator Superfamily LTQ54_RS01190 PF00582 Universal stress protein family LTQ54_RS01195 PF03441 FAD binding domain of DNA photolyase LTQ54_RS01195 PF00875 DNA photolyase LTQ54_RS01200 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LTQ54_RS01220 PF13476 AAA domain LTQ54_RS01225 PF00149 Calcineurin-like phosphoesterase LTQ54_RS01225 PF12320 Type 5 capsule protein repressor C-terminal domain LTQ54_RS01240 PF01810 LysE type translocator LTQ54_RS01245 PF00082 Subtilase family LTQ54_RS01250 PF00583 Acetyltransferase (GNAT) family LTQ54_RS01255 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS01260 PF13649 Methyltransferase domain LTQ54_RS01265 PF00593 TonB dependent receptor LTQ54_RS01265 PF07715 TonB-dependent Receptor Plug Domain LTQ54_RS01270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS01270 PF03466 LysR substrate binding domain LTQ54_RS01275 PF00704 Glycosyl hydrolases family 18 LTQ54_RS01305 PF00535 Glycosyl transferase family 2 LTQ54_RS01315 PF12729 Four helix bundle sensory module for signal transduction LTQ54_RS01315 PF00672 HAMP domain LTQ54_RS01315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS01325 PF01545 Cation efflux family LTQ54_RS01330 PF00144 Beta-lactamase LTQ54_RS01340 PF00144 Beta-lactamase LTQ54_RS01350 PF12833 Helix-turn-helix domain LTQ54_RS01355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS01355 PF03466 LysR substrate binding domain LTQ54_RS01360 PF00709 Adenylosuccinate synthetase LTQ54_RS01365 PF08448 PAS fold LTQ54_RS01365 PF00563 EAL domain LTQ54_RS01365 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS01370 PF04972 BON domain LTQ54_RS01370 PF00691 OmpA family LTQ54_RS01405 PF00437 Type II/IV secretion system protein LTQ54_RS01410 PF10609 NUBPL iron-transfer P-loop NTPase LTQ54_RS01420 PF00263 Bacterial type II and III secretion system protein LTQ54_RS01420 PF04972 BON domain LTQ54_RS01420 PF13629 Pilus formation protein N terminal region LTQ54_RS01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS01440 PF03466 LysR substrate binding domain LTQ54_RS01445 PF01638 HxlR-like helix-turn-helix LTQ54_RS01470 PF00072 Response regulator receiver domain LTQ54_RS01470 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS01475 PF07687 Peptidase dimerisation domain LTQ54_RS01475 PF01546 Peptidase family M20/M25/M40 LTQ54_RS01490 PF04204 Homoserine O-succinyltransferase LTQ54_RS01500 PF05971 RNA methyltransferase LTQ54_RS01505 PF01863 Protein of unknown function DUF45 LTQ54_RS01515 PF03466 LysR substrate binding domain LTQ54_RS01515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS01520 PF07690 Major Facilitator Superfamily LTQ54_RS01530 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS01540 PF00583 Acetyltransferase (GNAT) family LTQ54_RS01565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS01565 PF03466 LysR substrate binding domain LTQ54_RS01585 PF02322 Cytochrome bd terminal oxidase subunit II LTQ54_RS01590 PF01654 Cytochrome bd terminal oxidase subunit I LTQ54_RS01595 PF00155 Aminotransferase class I and II LTQ54_RS01595 PF00392 Bacterial regulatory proteins, gntR family LTQ54_RS01610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS01610 PF03466 LysR substrate binding domain LTQ54_RS01615 PF00107 Zinc-binding dehydrogenase LTQ54_RS01615 PF08240 Alcohol dehydrogenase GroES-like domain LTQ54_RS01625 PF00005 ABC transporter LTQ54_RS01630 PF01032 FecCD transport family LTQ54_RS01635 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LTQ54_RS01650 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LTQ54_RS01655 PF02654 Cobalamin-5-phosphate synthase LTQ54_RS01660 PF02277 Phosphoribosyltransferase LTQ54_RS01665 PF01613 Flavin reductase like domain LTQ54_RS01675 PF13460 NAD(P)H-binding LTQ54_RS01680 PF00375 Sodium:dicarboxylate symporter family LTQ54_RS01685 PF03928 Haem-degrading LTQ54_RS01690 PF00248 Aldo/keto reductase family LTQ54_RS01695 PF03466 LysR substrate binding domain LTQ54_RS01695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS01705 PF03440 Aerolysin/Pertussis toxin (APT) domain LTQ54_RS01705 PF01117 Aerolysin toxin LTQ54_RS01720 PF07969 Amidohydrolase family LTQ54_RS01735 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LTQ54_RS01740 PF03372 Endonuclease/Exonuclease/phosphatase family LTQ54_RS01760 PF04116 Fatty acid hydroxylase superfamily LTQ54_RS01785 PF08411 Exonuclease C-terminal LTQ54_RS01785 PF00929 Exonuclease LTQ54_RS01790 PF03788 LrgA family LTQ54_RS01795 PF04172 LrgB-like family LTQ54_RS01800 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LTQ54_RS01800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LTQ54_RS01805 PF02222 ATP-grasp domain LTQ54_RS01810 PF05724 Thiopurine S-methyltransferase (TPMT) LTQ54_RS01820 PF00034 Cytochrome c LTQ54_RS01855 PF00216 Bacterial DNA-binding protein LTQ54_RS01865 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_RS01870 PF07683 Cobalamin synthesis protein cobW C-terminal domain LTQ54_RS01870 PF02492 CobW/HypB/UreG, nucleotide-binding domain LTQ54_RS01880 PF00392 Bacterial regulatory proteins, gntR family LTQ54_RS01880 PF00155 Aminotransferase class I and II LTQ54_RS01885 PF00155 Aminotransferase class I and II LTQ54_RS01890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS01890 PF00072 Response regulator receiver domain LTQ54_RS01895 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LTQ54_RS01905 PF03466 LysR substrate binding domain LTQ54_RS01905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS01910 PF04151 Bacterial pre-peptidase C-terminal domain LTQ54_RS01910 PF00082 Subtilase family LTQ54_RS01910 PF05922 Peptidase inhibitor I9 LTQ54_RS01920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS01920 PF17200 Single Cache domain 2 LTQ54_RS01920 PF00672 HAMP domain LTQ54_RS01950 PF00216 Bacterial DNA-binding protein LTQ54_RS01965 PF01048 Phosphorylase superfamily LTQ54_RS01970 PF04973 Nicotinamide mononucleotide transporter LTQ54_RS01990 PF02001 Protein of unknown function DUF134 LTQ54_RS02005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS02005 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS02005 PF07689 KaiB domain LTQ54_RS02010 PF00072 Response regulator receiver domain LTQ54_RS02010 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS02025 PF03824 High-affinity nickel-transport protein LTQ54_RS02040 PF12805 FUSC-like inner membrane protein yccS LTQ54_RS02045 PF01156 Inosine-uridine preferring nucleoside hydrolase LTQ54_RS02050 PF12833 Helix-turn-helix domain LTQ54_RS02055 PF02627 Carboxymuconolactone decarboxylase family LTQ54_RS02075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS02075 PF03466 LysR substrate binding domain LTQ54_RS02085 PF00892 EamA-like transporter family LTQ54_RS02095 PF01053 Cys/Met metabolism PLP-dependent enzyme LTQ54_RS02100 PF01037 Lrp/AsnC ligand binding domain LTQ54_RS02110 PF01738 Dienelactone hydrolase family LTQ54_RS02115 PF03180 NLPA lipoprotein LTQ54_RS02130 PF04231 Endonuclease I LTQ54_RS02135 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LTQ54_RS02140 PF02152 Dihydroneopterin aldolase LTQ54_RS02145 PF01227 GTP cyclohydrolase I LTQ54_RS02160 PF01734 Patatin-like phospholipase LTQ54_RS02200 PF00561 alpha/beta hydrolase fold LTQ54_RS02215 PF03147 Ferredoxin-fold anticodon binding domain LTQ54_RS02215 PF03484 tRNA synthetase B5 domain LTQ54_RS02215 PF03483 B3/4 domain LTQ54_RS02215 PF01588 Putative tRNA binding domain LTQ54_RS02215 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LTQ54_RS02220 PF01409 tRNA synthetases class II core domain (F) LTQ54_RS02220 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LTQ54_RS02225 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS02225 PF00072 Response regulator receiver domain LTQ54_RS02265 PF04408 Helicase associated domain (HA2) LTQ54_RS02265 PF00271 Helicase conserved C-terminal domain LTQ54_RS02265 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LTQ54_RS02265 PF11898 Domain of unknown function (DUF3418) LTQ54_RS02265 PF00270 DEAD/DEAH box helicase LTQ54_RS02295 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS02315 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS02325 PF00012 Hsp70 protein LTQ54_RS02330 PF00012 Hsp70 protein LTQ54_RS02345 PF13302 Acetyltransferase (GNAT) domain LTQ54_RS02350 PF18024 Helix-turn-helix domain LTQ54_RS02350 PF00158 Sigma-54 interaction domain LTQ54_RS02355 PF05128 Domain of unknown function (DUF697) LTQ54_RS02360 PF04317 YcjX-like family, DUF463 LTQ54_RS02375 PF04715 Anthranilate synthase component I, N terminal region LTQ54_RS02375 PF00425 chorismate binding enzyme LTQ54_RS02380 PF00072 Response regulator receiver domain LTQ54_RS02380 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS02380 PF09308 LuxQ, periplasmic LTQ54_RS02380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS02390 PF00293 NUDIX domain LTQ54_RS02395 PF03222 Tryptophan/tyrosine permease family LTQ54_RS02400 PF03315 Serine dehydratase beta chain LTQ54_RS02400 PF03313 Serine dehydratase alpha chain LTQ54_RS02405 PF03222 Tryptophan/tyrosine permease family LTQ54_RS02415 PF02634 FdhD/NarQ family LTQ54_RS02420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS02420 PF03466 LysR substrate binding domain LTQ54_RS02425 PF00384 Molybdopterin oxidoreductase LTQ54_RS02425 PF01568 Molydopterin dinucleotide binding domain LTQ54_RS02430 PF00672 HAMP domain LTQ54_RS02430 PF02743 Cache domain LTQ54_RS02430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS02435 PF01740 STAS domain LTQ54_RS02435 PF00916 Sulfate permease family LTQ54_RS02440 PF01336 OB-fold nucleic acid binding domain LTQ54_RS02440 PF00152 tRNA synthetases class II (D, K and N) LTQ54_RS02460 PF00392 Bacterial regulatory proteins, gntR family LTQ54_RS02460 PF00155 Aminotransferase class I and II LTQ54_RS02470 PF01966 HD domain LTQ54_RS02470 PF00672 HAMP domain LTQ54_RS02475 PF00155 Aminotransferase class I and II LTQ54_RS02490 PF07733 Bacterial DNA polymerase III alpha NTPase domain LTQ54_RS02490 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LTQ54_RS02490 PF14579 Helix-hairpin-helix motif LTQ54_RS02490 PF02811 PHP domain LTQ54_RS02490 PF00929 Exonuclease LTQ54_RS02495 PF03475 3-alpha domain LTQ54_RS02495 PF03473 MOSC domain LTQ54_RS02505 PF12833 Helix-turn-helix domain LTQ54_RS02505 PF10114 Sensory domain found in PocR LTQ54_RS02510 PF07694 5TMR of 5TMR-LYT LTQ54_RS02510 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS02520 PF00266 Aminotransferase class-V LTQ54_RS02530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS02530 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS02530 PF00989 PAS fold LTQ54_RS02535 PF00158 Sigma-54 interaction domain LTQ54_RS02535 PF00072 Response regulator receiver domain LTQ54_RS02535 PF02954 Bacterial regulatory protein, Fis family LTQ54_RS02545 PF04994 TfoX C-terminal domain LTQ54_RS02545 PF04993 TfoX N-terminal domain LTQ54_RS02555 PF03956 Lysine exporter LysO LTQ54_RS02565 PF00282 Pyridoxal-dependent decarboxylase conserved domain LTQ54_RS02570 PF01418 Helix-turn-helix domain, rpiR family LTQ54_RS02570 PF01380 SIS domain LTQ54_RS02575 PF00465 Iron-containing alcohol dehydrogenase LTQ54_RS02580 PF00462 Glutaredoxin LTQ54_RS02585 PF06826 Predicted Permease Membrane Region LTQ54_RS02585 PF02080 TrkA-C domain LTQ54_RS02590 PF07055 Enoyl reductase FAD binding domain LTQ54_RS02590 PF12241 Trans-2-enoyl-CoA reductase catalytic region LTQ54_RS02590 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LTQ54_RS02595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LTQ54_RS02595 PF09317 Domain of unknown function (DUF1974) LTQ54_RS02595 PF02770 Acyl-CoA dehydrogenase, middle domain LTQ54_RS02595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LTQ54_RS02600 PF16295 Tetracyclin repressor-like, C-terminal domain LTQ54_RS02600 PF00440 Bacterial regulatory proteins, tetR family LTQ54_RS02615 PF06965 Na+/H+ antiporter 1 LTQ54_RS02630 PF00005 ABC transporter LTQ54_RS02635 PF01554 MatE LTQ54_RS02640 PF11066 Protein of unknown function (DUF2867) LTQ54_RS02640 PF13460 NAD(P)H-binding LTQ54_RS02650 PF07690 Major Facilitator Superfamily LTQ54_RS02655 PF01479 S4 domain LTQ54_RS02655 PF00849 RNA pseudouridylate synthase LTQ54_RS02660 PF04851 Type III restriction enzyme, res subunit LTQ54_RS02660 PF00271 Helicase conserved C-terminal domain LTQ54_RS02670 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS02670 PF00072 Response regulator receiver domain LTQ54_RS02675 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS02675 PF00672 HAMP domain LTQ54_RS02675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS02685 PF05193 Peptidase M16 inactive domain LTQ54_RS02685 PF00675 Insulinase (Peptidase family M16) LTQ54_RS02690 PF00005 ABC transporter LTQ54_RS02690 PF06472 ABC transporter transmembrane region 2 LTQ54_RS02695 PF07715 TonB-dependent Receptor Plug Domain LTQ54_RS02705 PF01618 MotA/TolQ/ExbB proton channel family LTQ54_RS02710 PF01618 MotA/TolQ/ExbB proton channel family LTQ54_RS02715 PF02472 Biopolymer transport protein ExbD/TolR LTQ54_RS02730 PF09335 SNARE associated Golgi protein LTQ54_RS02735 PF00535 Glycosyl transferase family 2 LTQ54_RS02735 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 LTQ54_RS02740 PF01386 Ribosomal L25p family LTQ54_RS02765 PF13302 Acetyltransferase (GNAT) domain LTQ54_RS02810 PF02470 MlaD protein LTQ54_RS02815 PF04403 Paraquat-inducible protein A LTQ54_RS02820 PF08787 Alginate lyase LTQ54_RS02825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS02825 PF03466 LysR substrate binding domain LTQ54_RS02835 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LTQ54_RS02840 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS02845 PF00571 CBS domain LTQ54_RS02845 PF00005 ABC transporter LTQ54_RS02865 PF00246 Zinc carboxypeptidase LTQ54_RS02865 PF18027 Cytosolic carboxypeptidase N-terminal domain LTQ54_RS02875 PF01810 LysE type translocator LTQ54_RS02880 PF00270 DEAD/DEAH box helicase LTQ54_RS02880 PF00271 Helicase conserved C-terminal domain LTQ54_RS02890 PF01910 Thiamine-binding protein LTQ54_RS02910 PF13416 Bacterial extracellular solute-binding protein LTQ54_RS02915 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS02920 PF00005 ABC transporter LTQ54_RS02925 PF01066 CDP-alcohol phosphatidyltransferase LTQ54_RS02930 PF10672 S-adenosylmethionine-dependent methyltransferase LTQ54_RS02930 PF02926 THUMP domain LTQ54_RS02930 PF01170 Putative RNA methylase family UPF0020 LTQ54_RS02935 PF00849 RNA pseudouridylate synthase LTQ54_RS02940 PF00672 HAMP domain LTQ54_RS02940 PF12729 Four helix bundle sensory module for signal transduction LTQ54_RS02940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS02945 PF00209 Sodium:neurotransmitter symporter family LTQ54_RS02950 PF13091 PLD-like domain LTQ54_RS02950 PF13396 Phospholipase_D-nuclease N-terminal LTQ54_RS02955 PF01053 Cys/Met metabolism PLP-dependent enzyme LTQ54_RS02970 PF03352 Methyladenine glycosylase LTQ54_RS02975 PF00873 AcrB/AcrD/AcrF family LTQ54_RS02980 PF13533 Biotin-lipoyl like LTQ54_RS02985 PF00529 HlyD membrane-fusion protein of T1SS LTQ54_RS02985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LTQ54_RS02990 PF04024 PspC domain LTQ54_RS02995 PF06667 Phage shock protein B LTQ54_RS03000 PF04012 PspA/IM30 family LTQ54_RS03005 PF00158 Sigma-54 interaction domain LTQ54_RS03005 PF02954 Bacterial regulatory protein, Fis family LTQ54_RS03010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_RS03015 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS03025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_RS03025 PF00005 ABC transporter LTQ54_RS03030 PF00005 ABC transporter LTQ54_RS03045 PF01368 DHH family LTQ54_RS03045 PF02833 DHHA2 domain LTQ54_RS03055 PF00384 Molybdopterin oxidoreductase LTQ54_RS03055 PF18364 Molybdopterin oxidoreductase N-terminal domain LTQ54_RS03055 PF01568 Molydopterin dinucleotide binding domain LTQ54_RS03060 PF03264 NapC/NirT cytochrome c family, N-terminal region LTQ54_RS03065 PF06796 Periplasmic nitrate reductase protein NapE LTQ54_RS03070 PF03649 Uncharacterised protein family (UPF0014) LTQ54_RS03075 PF01226 Formate/nitrite transporter LTQ54_RS03100 PF00265 Thymidine kinase LTQ54_RS03105 PF09190 DALR domain LTQ54_RS03105 PF01406 tRNA synthetases class I (C) catalytic domain LTQ54_RS03110 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LTQ54_RS03115 PF00149 Calcineurin-like phosphoesterase LTQ54_RS03120 PF00563 EAL domain LTQ54_RS03120 PF08668 HDOD domain LTQ54_RS03125 PF02810 SEC-C motif LTQ54_RS03130 PF01502 Phosphoribosyl-AMP cyclohydrolase LTQ54_RS03130 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LTQ54_RS03135 PF00977 Histidine biosynthesis protein LTQ54_RS03185 PF00580 UvrD/REP helicase N-terminal domain LTQ54_RS03185 PF13361 UvrD-like helicase C-terminal domain LTQ54_RS03185 PF12462 DNA helicase IV / RNA helicase N terminal LTQ54_RS03230 PF00012 Hsp70 protein LTQ54_RS03270 PF00977 Histidine biosynthesis protein LTQ54_RS03275 PF00117 Glutamine amidotransferase class-I LTQ54_RS03280 PF08645 Polynucleotide kinase 3 phosphatase LTQ54_RS03280 PF00475 Imidazoleglycerol-phosphate dehydratase LTQ54_RS03285 PF00155 Aminotransferase class I and II LTQ54_RS03290 PF00815 Histidinol dehydrogenase LTQ54_RS03295 PF08029 HisG, C-terminal domain LTQ54_RS03295 PF01634 ATP phosphoribosyltransferase LTQ54_RS03300 PF03553 Na+/H+ antiporter family LTQ54_RS03305 PF00816 H-NS histone family LTQ54_RS03310 PF00294 pfkB family carbohydrate kinase LTQ54_RS03325 PF04356 Protein of unknown function (DUF489) LTQ54_RS03330 PF00206 Lyase LTQ54_RS03330 PF08328 Adenylosuccinate lyase C-terminal LTQ54_RS03335 PF01435 Peptidase family M48 LTQ54_RS03350 PF08241 Methyltransferase domain LTQ54_RS03355 PF00155 Aminotransferase class I and II LTQ54_RS03360 PF06968 Biotin and Thiamin Synthesis associated domain LTQ54_RS03360 PF04055 Radical SAM superfamily LTQ54_RS03365 PF00202 Aminotransferase class-III LTQ54_RS03370 PF01258 Prokaryotic dksA/traR C4-type zinc finger LTQ54_RS03375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LTQ54_RS03375 PF02403 Seryl-tRNA synthetase N-terminal domain LTQ54_RS03380 PF00004 ATPase family associated with various cellular activities (AAA) LTQ54_RS03380 PF16193 AAA C-terminal domain LTQ54_RS03380 PF12002 MgsA AAA+ ATPase C terminal LTQ54_RS03385 PF03548 Outer membrane lipoprotein carrier protein LolA LTQ54_RS03390 PF17854 FtsK alpha domain LTQ54_RS03390 PF09397 Ftsk gamma domain LTQ54_RS03390 PF01580 FtsK/SpoIIIE family LTQ54_RS03390 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LTQ54_RS03395 PF01037 Lrp/AsnC ligand binding domain LTQ54_RS03400 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LTQ54_RS03400 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LTQ54_RS03410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS03410 PF03466 LysR substrate binding domain LTQ54_RS03420 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LTQ54_RS03425 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LTQ54_RS03430 PF18073 Rubredoxin metal binding domain LTQ54_RS03435 PF06305 Lipopolysaccharide assembly protein A domain LTQ54_RS03440 PF00216 Bacterial DNA-binding protein LTQ54_RS03445 PF00575 S1 RNA binding domain LTQ54_RS03450 PF02224 Cytidylate kinase LTQ54_RS03455 PF02348 Cytidylyltransferase LTQ54_RS03460 PF03966 Trm112p-like protein LTQ54_RS03470 PF00664 ABC transporter transmembrane region LTQ54_RS03470 PF00005 ABC transporter LTQ54_RS03475 PF00753 Metallo-beta-lactamase superfamily LTQ54_RS03475 PF03772 Competence protein LTQ54_RS03485 PF12704 MacB-like periplasmic core domain LTQ54_RS03485 PF02687 FtsX-like permease family LTQ54_RS03490 PF00005 ABC transporter LTQ54_RS03495 PF02687 FtsX-like permease family LTQ54_RS03495 PF12704 MacB-like periplasmic core domain LTQ54_RS03505 PF02559 CarD-like/TRCF domain LTQ54_RS03505 PF03461 TRCF domain LTQ54_RS03505 PF00271 Helicase conserved C-terminal domain LTQ54_RS03505 PF00270 DEAD/DEAH box helicase LTQ54_RS03505 PF17757 UvrB interaction domain LTQ54_RS03520 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_RS03525 PF05728 Uncharacterised protein family (UPF0227) LTQ54_RS03535 PF13036 Peptidoglycan-synthase activator LpoB LTQ54_RS03535 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LTQ54_RS03550 PF01230 HIT domain LTQ54_RS03555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS03555 PF00672 HAMP domain LTQ54_RS03565 PF01048 Phosphorylase superfamily LTQ54_RS03570 PF00403 Heavy-metal-associated domain LTQ54_RS03575 PF01554 MatE LTQ54_RS03580 PF01743 Poly A polymerase head domain LTQ54_RS03580 PF00571 CBS domain LTQ54_RS03595 PF02885 Glycosyl transferase family, helical bundle domain LTQ54_RS03595 PF00591 Glycosyl transferase family, a/b domain LTQ54_RS03610 PF01323 DSBA-like thioredoxin domain LTQ54_RS03615 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LTQ54_RS03640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LTQ54_RS03645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LTQ54_RS03650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS03650 PF03466 LysR substrate binding domain LTQ54_RS03655 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LTQ54_RS03670 PF14863 Alkyl sulfatase dimerisation LTQ54_RS03670 PF14864 Alkyl sulfatase C-terminal LTQ54_RS03670 PF00753 Metallo-beta-lactamase superfamily LTQ54_RS03680 PF01040 UbiA prenyltransferase family LTQ54_RS03685 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LTQ54_RS03690 PF00510 Cytochrome c oxidase subunit III LTQ54_RS03695 PF00115 Cytochrome C and Quinol oxidase polypeptide I LTQ54_RS03700 PF06481 COX Aromatic Rich Motif LTQ54_RS03700 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LTQ54_RS03705 PF00873 AcrB/AcrD/AcrF family LTQ54_RS03715 PF00440 Bacterial regulatory proteins, tetR family LTQ54_RS03715 PF17932 Tetracyclin repressor-like, C-terminal domain LTQ54_RS03720 PF03466 LysR substrate binding domain LTQ54_RS03720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS03725 PF08803 Putative mono-oxygenase ydhR LTQ54_RS03735 PF08212 Lipocalin-like domain LTQ54_RS03740 PF12833 Helix-turn-helix domain LTQ54_RS03740 PF10114 Sensory domain found in PocR LTQ54_RS03750 PF01979 Amidohydrolase family LTQ54_RS03760 PF00005 ABC transporter LTQ54_RS03765 PF01497 Periplasmic binding protein LTQ54_RS03770 PF01032 FecCD transport family LTQ54_RS03780 PF00593 TonB dependent receptor LTQ54_RS03780 PF07715 TonB-dependent Receptor Plug Domain LTQ54_RS03790 PF09286 Pro-kumamolisin, activation domain LTQ54_RS03790 PF04151 Bacterial pre-peptidase C-terminal domain LTQ54_RS03805 PF13382 Adenine deaminase C-terminal domain LTQ54_RS03805 PF01979 Amidohydrolase family LTQ54_RS03815 PF00085 Thioredoxin LTQ54_RS03820 PF11412 Disulphide bond corrector protein DsbC LTQ54_RS03820 PF02683 Cytochrome C biogenesis protein transmembrane region LTQ54_RS03830 PF01425 Amidase LTQ54_RS03840 PF12833 Helix-turn-helix domain LTQ54_RS03840 PF02311 AraC-like ligand binding domain LTQ54_RS03845 PF00892 EamA-like transporter family LTQ54_RS03855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS03855 PF03466 LysR substrate binding domain LTQ54_RS03880 PF02833 DHHA2 domain LTQ54_RS03880 PF01368 DHH family LTQ54_RS03885 PF05036 Sporulation related domain LTQ54_RS03885 PF03330 Lytic transglycolase LTQ54_RS03890 PF00860 Permease family LTQ54_RS03900 PF10417 C-terminal domain of 1-Cys peroxiredoxin LTQ54_RS03900 PF00578 AhpC/TSA family LTQ54_RS03905 PF13192 Thioredoxin domain LTQ54_RS03905 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_RS03910 PF01810 LysE type translocator LTQ54_RS03915 PF01037 Lrp/AsnC ligand binding domain LTQ54_RS03920 PF03313 Serine dehydratase alpha chain LTQ54_RS03920 PF03315 Serine dehydratase beta chain LTQ54_RS03925 PF00474 Sodium:solute symporter family LTQ54_RS03930 PF07690 Major Facilitator Superfamily LTQ54_RS03945 PF00356 Bacterial regulatory proteins, lacI family LTQ54_RS03950 PF00884 Sulfatase LTQ54_RS03975 PF03466 LysR substrate binding domain LTQ54_RS03975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS03980 PF02056 Family 4 glycosyl hydrolase LTQ54_RS03980 PF11975 Family 4 glycosyl hydrolase C-terminal domain LTQ54_RS03985 PF04794 YdjC-like protein LTQ54_RS03990 PF00376 MerR family regulatory protein LTQ54_RS03990 PF09278 MerR, DNA binding LTQ54_RS03995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS03995 PF03466 LysR substrate binding domain LTQ54_RS04010 PF01645 Conserved region in glutamate synthase LTQ54_RS04020 PF00158 Sigma-54 interaction domain LTQ54_RS04020 PF00072 Response regulator receiver domain LTQ54_RS04020 PF02954 Bacterial regulatory protein, Fis family LTQ54_RS04035 PF03109 ABC1 family LTQ54_RS04040 PF00255 Glutathione peroxidase LTQ54_RS04075 PF00535 Glycosyl transferase family 2 LTQ54_RS04080 PF00534 Glycosyl transferases group 1 LTQ54_RS04080 PF13439 Glycosyltransferase Family 4 LTQ54_RS04085 PF01693 Caulimovirus viroplasmin LTQ54_RS04115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS04115 PF03466 LysR substrate binding domain LTQ54_RS04125 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_RS04140 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LTQ54_RS04145 PF09619 Type III secretion system lipoprotein chaperone (YscW) LTQ54_RS04160 PF13404 AsnC-type helix-turn-helix domain LTQ54_RS04160 PF01037 Lrp/AsnC ligand binding domain LTQ54_RS04165 PF00291 Pyridoxal-phosphate dependent enzyme LTQ54_RS04175 PF00873 AcrB/AcrD/AcrF family LTQ54_RS04180 PF13533 Biotin-lipoyl like LTQ54_RS04230 PF01048 Phosphorylase superfamily LTQ54_RS04245 PF07690 Major Facilitator Superfamily LTQ54_RS04250 PF03601 Conserved hypothetical protein 698 LTQ54_RS04260 PF13193 AMP-binding enzyme C-terminal domain LTQ54_RS04260 PF00501 AMP-binding enzyme LTQ54_RS04265 PF13378 Enolase C-terminal domain-like LTQ54_RS04270 PF00378 Enoyl-CoA hydratase/isomerase LTQ54_RS04275 PF00561 alpha/beta hydrolase fold LTQ54_RS04280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LTQ54_RS04280 PF16582 Middle domain of thiamine pyrophosphate LTQ54_RS04280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LTQ54_RS04285 PF00425 chorismate binding enzyme LTQ54_RS04290 PF00155 Aminotransferase class I and II LTQ54_RS04300 PF01966 HD domain LTQ54_RS04300 PF13286 Phosphohydrolase-associated domain LTQ54_RS04320 PF13145 PPIC-type PPIASE domain LTQ54_RS04325 PF00216 Bacterial DNA-binding protein LTQ54_RS04330 PF02190 ATP-dependent protease La (LON) substrate-binding domain LTQ54_RS04330 PF00004 ATPase family associated with various cellular activities (AAA) LTQ54_RS04330 PF05362 Lon protease (S16) C-terminal proteolytic domain LTQ54_RS04335 PF06689 ClpX C4-type zinc finger LTQ54_RS04335 PF07724 AAA domain (Cdc48 subfamily) LTQ54_RS04335 PF10431 C-terminal, D2-small domain, of ClpB protein LTQ54_RS04340 PF00574 Clp protease LTQ54_RS04345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LTQ54_RS04345 PF05698 Bacterial trigger factor protein (TF) C-terminus LTQ54_RS04345 PF05697 Bacterial trigger factor protein (TF) LTQ54_RS04350 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS04350 PF02743 Cache domain LTQ54_RS04350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS04355 PF02954 Bacterial regulatory protein, Fis family LTQ54_RS04355 PF00158 Sigma-54 interaction domain LTQ54_RS04355 PF00072 Response regulator receiver domain LTQ54_RS04365 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LTQ54_RS04370 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LTQ54_RS04375 PF03480 Bacterial extracellular solute-binding protein, family 7 LTQ54_RS04385 PF01648 4'-phosphopantetheinyl transferase superfamily LTQ54_RS04390 PF02801 Beta-ketoacyl synthase, C-terminal domain LTQ54_RS04390 PF00109 Beta-ketoacyl synthase, N-terminal domain LTQ54_RS04390 PF08659 KR domain LTQ54_RS04390 PF00550 Phosphopantetheine attachment site LTQ54_RS04390 PF14765 Polyketide synthase dehydratase LTQ54_RS04390 PF16197 Ketoacyl-synthetase C-terminal extension LTQ54_RS04390 PF00698 Acyl transferase domain LTQ54_RS04400 PF02801 Beta-ketoacyl synthase, C-terminal domain LTQ54_RS04400 PF16197 Ketoacyl-synthetase C-terminal extension LTQ54_RS04400 PF14765 Polyketide synthase dehydratase LTQ54_RS04400 PF00550 Phosphopantetheine attachment site LTQ54_RS04400 PF00698 Acyl transferase domain LTQ54_RS04400 PF08659 KR domain LTQ54_RS04400 PF00109 Beta-ketoacyl synthase, N-terminal domain LTQ54_RS04405 PF00698 Acyl transferase domain LTQ54_RS04405 PF03060 Nitronate monooxygenase LTQ54_RS04410 PF16360 GTP-binding GTPase Middle Region LTQ54_RS04410 PF13167 GTP-binding GTPase N-terminal LTQ54_RS04410 PF01926 50S ribosome-binding GTPase LTQ54_RS04415 PF00005 ABC transporter LTQ54_RS04415 PF17912 MalK OB fold domain LTQ54_RS04415 PF03459 TOBE domain LTQ54_RS04420 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS04425 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS04430 PF01547 Bacterial extracellular solute-binding protein LTQ54_RS04435 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS04435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS04435 PF00672 HAMP domain LTQ54_RS04440 PF00072 Response regulator receiver domain LTQ54_RS04440 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS04445 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LTQ54_RS04450 PF01810 LysE type translocator LTQ54_RS04455 PF05175 Methyltransferase small domain LTQ54_RS04460 PF01713 Smr domain LTQ54_RS04465 PF00300 Histidine phosphatase superfamily (branch 1) LTQ54_RS04470 PF00675 Insulinase (Peptidase family M16) LTQ54_RS04470 PF05193 Peptidase M16 inactive domain LTQ54_RS04470 PF16187 Middle or third domain of peptidase_M16 LTQ54_RS04475 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LTQ54_RS04475 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LTQ54_RS04475 PF00378 Enoyl-CoA hydratase/isomerase LTQ54_RS04480 PF00108 Thiolase, N-terminal domain LTQ54_RS04480 PF02803 Thiolase, C-terminal domain LTQ54_RS04485 PF04542 Sigma-70 region 2 LTQ54_RS04485 PF08281 Sigma-70, region 4 LTQ54_RS04495 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LTQ54_RS04500 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LTQ54_RS04505 PF04333 MlaA lipoprotein LTQ54_RS04510 PF03918 Cytochrome C biogenesis protein LTQ54_RS04515 PF03918 Cytochrome C biogenesis protein LTQ54_RS04520 PF08534 Redoxin LTQ54_RS04525 PF01578 Cytochrome C assembly protein LTQ54_RS04525 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LTQ54_RS04530 PF03100 CcmE LTQ54_RS04535 PF04995 Heme exporter protein D (CcmD) LTQ54_RS04540 PF01578 Cytochrome C assembly protein LTQ54_RS04545 PF03379 CcmB protein LTQ54_RS04550 PF00005 ABC transporter LTQ54_RS04560 PF01584 CheW-like domain LTQ54_RS04570 PF13614 AAA domain LTQ54_RS04575 PF01339 CheB methylesterase LTQ54_RS04575 PF00072 Response regulator receiver domain LTQ54_RS04580 PF01584 CheW-like domain LTQ54_RS04580 PF02895 Signal transducing histidine kinase, homodimeric domain LTQ54_RS04580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS04580 PF01627 Hpt domain LTQ54_RS04580 PF00072 Response regulator receiver domain LTQ54_RS04585 PF04344 Chemotaxis phosphatase, CheZ LTQ54_RS04590 PF00072 Response regulator receiver domain LTQ54_RS04595 PF04542 Sigma-70 region 2 LTQ54_RS04595 PF04539 Sigma-70 region 3 LTQ54_RS04595 PF04545 Sigma-70, region 4 LTQ54_RS04600 PF10609 NUBPL iron-transfer P-loop NTPase LTQ54_RS04605 PF00448 SRP54-type protein, GTPase domain LTQ54_RS04610 PF00771 FHIPEP family LTQ54_RS04615 PF01312 FlhB HrpN YscU SpaS Family LTQ54_RS04620 PF01311 Bacterial export proteins, family 1 LTQ54_RS04625 PF01313 Bacterial export proteins, family 3 LTQ54_RS04630 PF00813 FliP family LTQ54_RS04635 PF04347 Flagellar biosynthesis protein, FliO LTQ54_RS04640 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LTQ54_RS04645 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LTQ54_RS04645 PF02154 Flagellar motor switch protein FliM LTQ54_RS04665 PF18269 T3SS EscN ATPase C-terminal domain LTQ54_RS04665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LTQ54_RS04675 PF14842 FliG N-terminal domain LTQ54_RS04675 PF14841 FliG middle domain LTQ54_RS04675 PF01706 FliG C-terminal domain LTQ54_RS04680 PF08345 Flagellar M-ring protein C-terminal LTQ54_RS04680 PF01514 Secretory protein of YscJ/FliF family LTQ54_RS04685 PF02049 Flagellar hook-basal body complex protein FliE LTQ54_RS04690 PF00072 Response regulator receiver domain LTQ54_RS04690 PF00158 Sigma-54 interaction domain LTQ54_RS04690 PF02954 Bacterial regulatory protein, Fis family LTQ54_RS04695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS04695 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS04695 PF13188 PAS domain LTQ54_RS04700 PF00158 Sigma-54 interaction domain LTQ54_RS04700 PF06490 Flagellar regulatory protein FleQ LTQ54_RS04700 PF02954 Bacterial regulatory protein, Fis family LTQ54_RS04705 PF02561 Flagellar protein FliS LTQ54_RS04715 PF02465 Flagellar hook-associated protein 2 N-terminus LTQ54_RS04715 PF07195 Flagellar hook-associated protein 2 C-terminus LTQ54_RS04715 PF07196 Flagellin hook IN motif LTQ54_RS04720 PF03646 FlaG protein LTQ54_RS04725 PF00669 Bacterial flagellin N-terminal helical region LTQ54_RS04725 PF07196 Flagellin hook IN motif LTQ54_RS04725 PF00700 Bacterial flagellin C-terminal helical region LTQ54_RS04730 PF00669 Bacterial flagellin N-terminal helical region LTQ54_RS04730 PF07196 Flagellin hook IN motif LTQ54_RS04730 PF00700 Bacterial flagellin C-terminal helical region LTQ54_RS04735 PF00669 Bacterial flagellin N-terminal helical region LTQ54_RS04735 PF00700 Bacterial flagellin C-terminal helical region LTQ54_RS04735 PF07196 Flagellin hook IN motif LTQ54_RS04745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LTQ54_RS04745 PF07196 Flagellin hook IN motif LTQ54_RS04750 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LTQ54_RS04750 PF10135 Rod binding protein LTQ54_RS04755 PF02119 Flagellar P-ring protein LTQ54_RS04760 PF02107 Flagellar L-ring protein LTQ54_RS04765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LTQ54_RS04765 PF00460 Flagella basal body rod protein LTQ54_RS04770 PF00460 Flagella basal body rod protein LTQ54_RS04770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LTQ54_RS04775 PF07559 Flagellar basal body protein FlaE LTQ54_RS04775 PF00460 Flagella basal body rod protein LTQ54_RS04775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LTQ54_RS04780 PF03963 Flagellar hook capping protein - N-terminal region LTQ54_RS04780 PF13860 FlgD Ig-like domain LTQ54_RS04780 PF13861 FlgD Tudor-like domain LTQ54_RS04785 PF00460 Flagella basal body rod protein LTQ54_RS04785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LTQ54_RS04790 PF00460 Flagella basal body rod protein LTQ54_RS04795 PF01739 CheR methyltransferase, SAM binding domain LTQ54_RS04795 PF03705 CheR methyltransferase, all-alpha domain LTQ54_RS04800 PF01584 CheW-like domain LTQ54_RS04800 PF00072 Response regulator receiver domain LTQ54_RS04805 PF13144 Chaperone for flagella basal body P-ring formation LTQ54_RS04840 PF04820 Tryptophan halogenase LTQ54_RS04865 PF00550 Phosphopantetheine attachment site LTQ54_RS04870 PF00550 Phosphopantetheine attachment site LTQ54_RS04880 PF00501 AMP-binding enzyme LTQ54_RS04880 PF13193 AMP-binding enzyme C-terminal domain LTQ54_RS04890 PF00535 Glycosyl transferase family 2 LTQ54_RS04895 PF00221 Aromatic amino acid lyase LTQ54_RS04920 PF00109 Beta-ketoacyl synthase, N-terminal domain LTQ54_RS04920 PF02801 Beta-ketoacyl synthase, C-terminal domain LTQ54_RS04935 PF00109 Beta-ketoacyl synthase, N-terminal domain LTQ54_RS04935 PF02801 Beta-ketoacyl synthase, C-terminal domain LTQ54_RS04940 PF00749 tRNA synthetases class I (E and Q), catalytic domain LTQ54_RS04945 PF00403 Heavy-metal-associated domain LTQ54_RS04960 PF03173 Putative carbohydrate binding domain LTQ54_RS04960 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain LTQ54_RS04960 PF00728 Glycosyl hydrolase family 20, catalytic domain LTQ54_RS04960 PF02838 Glycosyl hydrolase family 20, domain 2 LTQ54_RS04985 PF01713 Smr domain LTQ54_RS04990 PF00849 RNA pseudouridylate synthase LTQ54_RS04990 PF01479 S4 domain LTQ54_RS04995 PF04073 Aminoacyl-tRNA editing domain LTQ54_RS05000 PF02872 5'-nucleotidase, C-terminal domain LTQ54_RS05000 PF00149 Calcineurin-like phosphoesterase LTQ54_RS05005 PF00793 DAHP synthetase I family LTQ54_RS05010 PF13369 Transglutaminase-like superfamily LTQ54_RS05015 PF04247 Invasion gene expression up-regulator, SirB LTQ54_RS05020 PF13847 Methyltransferase domain LTQ54_RS05020 PF17827 PrmC N-terminal domain LTQ54_RS05025 PF03462 PCRF domain LTQ54_RS05025 PF00472 RF-1 domain LTQ54_RS05030 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LTQ54_RS05030 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LTQ54_RS05030 PF01488 Shikimate / quinate 5-dehydrogenase LTQ54_RS05035 PF03550 Outer membrane lipoprotein LolB LTQ54_RS05040 PF08544 GHMP kinases C terminal LTQ54_RS05040 PF00288 GHMP kinases N terminal domain LTQ54_RS05045 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LTQ54_RS05045 PF14572 Phosphoribosyl synthetase-associated domain LTQ54_RS05050 PF01195 Peptidyl-tRNA hydrolase LTQ54_RS05055 PF01926 50S ribosome-binding GTPase LTQ54_RS05055 PF06071 Protein of unknown function (DUF933) LTQ54_RS05155 PF10282 Lactonase, 7-bladed beta-propeller LTQ54_RS05160 PF01494 FAD binding domain LTQ54_RS05165 PF00919 Uncharacterized protein family UPF0004 LTQ54_RS05165 PF01938 TRAM domain LTQ54_RS05165 PF04055 Radical SAM superfamily LTQ54_RS05170 PF02562 PhoH-like protein LTQ54_RS05175 PF02130 Uncharacterized protein family UPF0054 LTQ54_RS05180 PF00571 CBS domain LTQ54_RS05180 PF03471 Transporter associated domain LTQ54_RS05185 PF00795 Carbon-nitrogen hydrolase LTQ54_RS05190 PF07295 Zinc-ribbon containing domain LTQ54_RS05195 PF08264 Anticodon-binding domain of tRNA LTQ54_RS05195 PF00133 tRNA synthetases class I (I, L, M and V) LTQ54_RS05195 PF13603 Leucyl-tRNA synthetase, Domain 2 LTQ54_RS05200 PF04390 Lipopolysaccharide-assembly LTQ54_RS05205 PF06144 DNA polymerase III, delta subunit LTQ54_RS05205 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LTQ54_RS05215 PF02590 Predicted SPOUT methyltransferase LTQ54_RS05220 PF00905 Penicillin binding protein transpeptidase domain LTQ54_RS05220 PF03717 Penicillin-binding Protein dimerisation domain LTQ54_RS05225 PF01098 Cell cycle protein LTQ54_RS05230 PF05036 Sporulation related domain LTQ54_RS05230 PF03330 Lytic transglycolase LTQ54_RS05235 PF07943 Penicillin-binding protein 5, C-terminal domain LTQ54_RS05235 PF00768 D-alanyl-D-alanine carboxypeptidase LTQ54_RS05240 PF04359 Protein of unknown function (DUF493) LTQ54_RS05245 PF03099 Biotin/lipoate A/B protein ligase family LTQ54_RS05250 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LTQ54_RS05250 PF04055 Radical SAM superfamily LTQ54_RS05255 PF00209 Sodium:neurotransmitter symporter family LTQ54_RS05270 PF09382 RQC domain LTQ54_RS05270 PF00270 DEAD/DEAH box helicase LTQ54_RS05270 PF00271 Helicase conserved C-terminal domain LTQ54_RS05270 PF00570 HRDC domain LTQ54_RS05270 PF16124 RecQ zinc-binding LTQ54_RS05275 PF11798 IMS family HHH motif LTQ54_RS05275 PF00817 impB/mucB/samB family LTQ54_RS05275 PF11799 impB/mucB/samB family C-terminal domain LTQ54_RS05280 PF00072 Response regulator receiver domain LTQ54_RS05280 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS05285 PF04400 (Na+)-NQR maturation NqrM LTQ54_RS05290 PF02424 ApbE family LTQ54_RS05295 PF00970 Oxidoreductase FAD-binding domain LTQ54_RS05295 PF00111 2Fe-2S iron-sulfur cluster binding domain LTQ54_RS05295 PF00175 Oxidoreductase NAD-binding domain LTQ54_RS05300 PF02508 Rnf-Nqr subunit, membrane protein LTQ54_RS05305 PF02508 Rnf-Nqr subunit, membrane protein LTQ54_RS05310 PF04205 FMN-binding domain LTQ54_RS05315 PF03116 NQR2, RnfD, RnfE family LTQ54_RS05320 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) LTQ54_RS05320 PF11973 NQRA C-terminal domain LTQ54_RS05325 PF01722 BolA-like protein LTQ54_RS05330 PF05175 Methyltransferase small domain LTQ54_RS05340 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LTQ54_RS05345 PF07690 Major Facilitator Superfamily LTQ54_RS05355 PF03502 Nucleoside-specific channel-forming protein, Tsx LTQ54_RS05360 PF08546 Ketopantoate reductase PanE/ApbA C terminal LTQ54_RS05360 PF02558 Ketopantoate reductase PanE/ApbA LTQ54_RS05365 PF00266 Aminotransferase class-V LTQ54_RS05370 PF02657 Fe-S metabolism associated domain LTQ54_RS05375 PF00899 ThiF family LTQ54_RS05380 PF06725 3D domain LTQ54_RS05380 PF03562 MltA specific insert domain LTQ54_RS05390 PF00696 Amino acid kinase family LTQ54_RS05390 PF00583 Acetyltransferase (GNAT) family LTQ54_RS05400 PF13538 UvrD-like helicase C-terminal domain LTQ54_RS05405 PF13361 UvrD-like helicase C-terminal domain LTQ54_RS05405 PF12705 PD-(D/E)XK nuclease superfamily LTQ54_RS05405 PF00580 UvrD/REP helicase N-terminal domain LTQ54_RS05415 PF17946 RecC C-terminal domain LTQ54_RS05425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS05425 PF03466 LysR substrate binding domain LTQ54_RS05430 PF07130 YebG protein LTQ54_RS05445 PF01914 MarC family integral membrane protein LTQ54_RS05450 PF02872 5'-nucleotidase, C-terminal domain LTQ54_RS05450 PF00149 Calcineurin-like phosphoesterase LTQ54_RS05455 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle LTQ54_RS05455 PF14602 Hexapeptide repeat of succinyl-transferase LTQ54_RS05465 PF02769 AIR synthase related protein, C-terminal domain LTQ54_RS05465 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LTQ54_RS05465 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LTQ54_RS05470 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_RS05470 PF01464 Transglycosylase SLT domain LTQ54_RS05475 PF14437 MafB19-like deaminase LTQ54_RS05480 PF03471 Transporter associated domain LTQ54_RS05480 PF01595 Cyclin M transmembrane N-terminal domain LTQ54_RS05480 PF00571 CBS domain LTQ54_RS05485 PF03806 AbgT putative transporter family LTQ54_RS05510 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor LTQ54_RS05510 PF07963 Prokaryotic N-terminal methylation motif LTQ54_RS05515 PF00226 DnaJ domain LTQ54_RS05515 PF01556 DnaJ C terminal domain LTQ54_RS05515 PF00684 DnaJ central domain LTQ54_RS05520 PF00012 Hsp70 protein LTQ54_RS05525 PF13006 Insertion element 4 transposase N-terminal LTQ54_RS05525 PF01609 Transposase DDE domain LTQ54_RS05535 PF00375 Sodium:dicarboxylate symporter family LTQ54_RS05540 PF01025 GrpE LTQ54_RS05545 PF01513 ATP-NAD kinase LTQ54_RS05550 PF02463 RecF/RecN/SMC N terminal domain LTQ54_RS05555 PF04355 SmpA / OmlA family LTQ54_RS05560 PF03658 RnfH family Ubiquitin LTQ54_RS05565 PF03364 Polyketide cyclase / dehydrase and lipid transport LTQ54_RS05570 PF01668 SmpB protein LTQ54_RS05580 PF08443 RimK-like ATP-grasp domain LTQ54_RS05580 PF18030 RimK PreATP-grasp domain LTQ54_RS05605 PF01553 Acyltransferase LTQ54_RS05610 PF00753 Metallo-beta-lactamase superfamily LTQ54_RS05610 PF10996 Beta-Casp domain LTQ54_RS05610 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LTQ54_RS05615 PF01235 Sodium:alanine symporter family LTQ54_RS05620 PF01184 GPR1/FUN34/yaaH family LTQ54_RS05625 PF03553 Na+/H+ antiporter family LTQ54_RS05630 PF00704 Glycosyl hydrolases family 18 LTQ54_RS05630 PF06483 Chitinase C LTQ54_RS05635 PF00958 GMP synthase C terminal domain LTQ54_RS05635 PF02540 NAD synthase LTQ54_RS05635 PF00117 Glutamine amidotransferase class-I LTQ54_RS05640 PF00571 CBS domain LTQ54_RS05640 PF00478 IMP dehydrogenase / GMP reductase domain LTQ54_RS05645 PF13742 OB-fold nucleic acid binding domain LTQ54_RS05645 PF02601 Exonuclease VII, large subunit LTQ54_RS05650 PF02492 CobW/HypB/UreG, nucleotide-binding domain LTQ54_RS05655 PF01730 UreF LTQ54_RS05665 PF05194 UreE urease accessory protein, C-terminal domain LTQ54_RS05665 PF02814 UreE urease accessory protein, N-terminal domain LTQ54_RS05670 PF01979 Amidohydrolase family LTQ54_RS05670 PF00449 Urease alpha-subunit, N-terminal domain LTQ54_RS05675 PF00699 Urease beta subunit LTQ54_RS05680 PF00547 Urease, gamma subunit LTQ54_RS05685 PF01774 UreD urease accessory protein LTQ54_RS05690 PF00005 ABC transporter LTQ54_RS05695 PF12399 Branched-chain amino acid ATP-binding cassette transporter LTQ54_RS05695 PF00005 ABC transporter LTQ54_RS05705 PF02653 Branched-chain amino acid transport system / permease component LTQ54_RS05720 PF08448 PAS fold LTQ54_RS05720 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS05730 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LTQ54_RS05730 PF01926 50S ribosome-binding GTPase LTQ54_RS05735 PF13360 PQQ-like domain LTQ54_RS05740 PF09976 Tetratricopeptide repeat-like domain LTQ54_RS05745 PF03129 Anticodon binding domain LTQ54_RS05745 PF13393 Histidyl-tRNA synthetase LTQ54_RS05750 PF04551 GcpE protein LTQ54_RS05755 PF13464 Domain of unknown function (DUF4115) LTQ54_RS05760 PF04055 Radical SAM superfamily LTQ54_RS05765 PF00334 Nucleoside diphosphate kinase LTQ54_RS05770 PF00883 Cytosol aminopeptidase family, catalytic domain LTQ54_RS05770 PF12404 Peptidase LTQ54_RS05775 PF04384 Iron-sulphur cluster assembly LTQ54_RS05780 PF00111 2Fe-2S iron-sulfur cluster binding domain LTQ54_RS05785 PF00012 Hsp70 protein LTQ54_RS05790 PF00226 DnaJ domain LTQ54_RS05790 PF07743 HSCB C-terminal oligomerisation domain LTQ54_RS05795 PF01521 Iron-sulphur cluster biosynthesis LTQ54_RS05800 PF01592 NifU-like N terminal domain LTQ54_RS05805 PF00266 Aminotransferase class-V LTQ54_RS05810 PF02082 Transcriptional regulator LTQ54_RS05815 PF00588 SpoU rRNA Methylase family LTQ54_RS05820 PF00459 Inositol monophosphatase family LTQ54_RS05825 PF07549 SecD/SecF GG Motif LTQ54_RS05825 PF02355 Protein export membrane protein LTQ54_RS05830 PF07549 SecD/SecF GG Motif LTQ54_RS05830 PF02355 Protein export membrane protein LTQ54_RS05830 PF13721 SecD export protein N-terminal TM region LTQ54_RS05835 PF02699 Preprotein translocase subunit LTQ54_RS05840 PF01702 Queuine tRNA-ribosyltransferase LTQ54_RS05845 PF02547 Queuosine biosynthesis protein LTQ54_RS05850 PF00571 CBS domain LTQ54_RS05870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS05870 PF03466 LysR substrate binding domain LTQ54_RS05875 PF10417 C-terminal domain of 1-Cys peroxiredoxin LTQ54_RS05875 PF00578 AhpC/TSA family LTQ54_RS05880 PF03932 CutC family LTQ54_RS05885 PF03466 LysR substrate binding domain LTQ54_RS05885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS05900 PF01895 PhoU domain LTQ54_RS05905 PF00005 ABC transporter LTQ54_RS05910 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS05915 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS05920 PF17941 Polyphosphate kinase C-terminal domain 1 LTQ54_RS05920 PF02503 Polyphosphate kinase middle domain LTQ54_RS05920 PF13089 Polyphosphate kinase N-terminal domain LTQ54_RS05920 PF13090 Polyphosphate kinase C-terminal domain 2 LTQ54_RS05925 PF02541 Ppx/GppA phosphatase family LTQ54_RS05930 PF12849 PBP superfamily domain LTQ54_RS05935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS05935 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS05935 PF00989 PAS fold LTQ54_RS05935 PF11808 Phosphate regulon sensor protein PhoR LTQ54_RS05940 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS05940 PF00072 Response regulator receiver domain LTQ54_RS05945 PF04381 Putative exonuclease, RdgC LTQ54_RS05950 PF01136 Peptidase family U32 LTQ54_RS05950 PF16325 Peptidase family U32 C-terminal domain LTQ54_RS05955 PF12838 4Fe-4S dicluster domain LTQ54_RS05965 PF03411 Penicillin-insensitive murein endopeptidase LTQ54_RS06000 PF07724 AAA domain (Cdc48 subfamily) LTQ54_RS06000 PF17871 AAA lid domain LTQ54_RS06000 PF00004 ATPase family associated with various cellular activities (AAA) LTQ54_RS06000 PF02861 Clp amino terminal domain, pathogenicity island component LTQ54_RS06000 PF10431 C-terminal, D2-small domain, of ClpB protein LTQ54_RS06005 PF02578 Multi-copper polyphenol oxidoreductase laccase LTQ54_RS06010 PF00849 RNA pseudouridylate synthase LTQ54_RS06010 PF01479 S4 domain LTQ54_RS06015 PF13525 Outer membrane lipoprotein LTQ54_RS06020 PF01464 Transglycosylase SLT domain LTQ54_RS06025 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LTQ54_RS06030 PF00800 Prephenate dehydratase LTQ54_RS06030 PF01817 Chorismate mutase type II LTQ54_RS06035 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS06035 PF00563 EAL domain LTQ54_RS06040 PF01931 Protein of unknown function DUF84 LTQ54_RS06045 PF01371 Trp repressor protein LTQ54_RS06050 PF14718 Soluble lytic murein transglycosylase L domain LTQ54_RS06050 PF01464 Transglycosylase SLT domain LTQ54_RS06055 PF00005 ABC transporter LTQ54_RS06055 PF12848 ABC transporter LTQ54_RS06060 PF07238 PilZ domain LTQ54_RS06065 PF01551 Peptidase family M23 LTQ54_RS06065 PF04225 Opacity-associated protein A LysM-like domain LTQ54_RS06070 PF02153 Prephenate dehydrogenase LTQ54_RS06070 PF01817 Chorismate mutase type II LTQ54_RS06075 PF00793 DAHP synthetase I family LTQ54_RS06080 PF00933 Glycosyl hydrolase family 3 N terminal domain LTQ54_RS06085 PF03702 Anhydro-N-acetylmuramic acid kinase LTQ54_RS06090 PF13580 SIS domain LTQ54_RS06100 PF02554 Carbon starvation protein CstA LTQ54_RS06105 PF06580 Histidine kinase LTQ54_RS06105 PF07694 5TMR of 5TMR-LYT LTQ54_RS06110 PF00072 Response regulator receiver domain LTQ54_RS06110 PF04397 LytTr DNA-binding domain LTQ54_RS06115 PF02401 LytB protein LTQ54_RS06120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LTQ54_RS06125 PF01252 Signal peptidase (SPase) II LTQ54_RS06130 PF00133 tRNA synthetases class I (I, L, M and V) LTQ54_RS06130 PF08264 Anticodon-binding domain of tRNA LTQ54_RS06130 PF06827 Zinc finger found in FPG and IleRS LTQ54_RS06135 PF06574 FAD synthetase LTQ54_RS06135 PF01687 Riboflavin kinase LTQ54_RS06140 PF03023 Lipid II flippase MurJ LTQ54_RS06145 PF01649 Ribosomal protein S20 LTQ54_RS06150 PF01022 Bacterial regulatory protein, arsR family LTQ54_RS06155 PF03466 LysR substrate binding domain LTQ54_RS06155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS06160 PF02690 Na+/Pi-cotransporter LTQ54_RS06170 PF00072 Response regulator receiver domain LTQ54_RS06170 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS06175 PF00303 Thymidylate synthase LTQ54_RS06180 PF01790 Prolipoprotein diacylglyceryl transferase LTQ54_RS06185 PF01925 Sulfite exporter TauE/SafE LTQ54_RS06195 PF00293 NUDIX domain LTQ54_RS06200 PF02976 DNA mismatch repair enzyme MutH LTQ54_RS06215 PF06505 Activator of aromatic catabolism LTQ54_RS06215 PF02830 V4R domain LTQ54_RS06215 PF00158 Sigma-54 interaction domain LTQ54_RS06215 PF02954 Bacterial regulatory protein, Fis family LTQ54_RS06220 PF00152 tRNA synthetases class II (D, K and N) LTQ54_RS06220 PF01336 OB-fold nucleic acid binding domain LTQ54_RS06230 PF17768 RecJ OB domain LTQ54_RS06230 PF01368 DHH family LTQ54_RS06230 PF02272 DHHA1 domain LTQ54_RS06235 PF13098 Thioredoxin-like domain LTQ54_RS06235 PF10411 Disulfide bond isomerase protein N-terminus LTQ54_RS06240 PF00589 Phage integrase family LTQ54_RS06240 PF02899 Phage integrase, N-terminal SAM-like domain LTQ54_RS06245 PF00258 Flavodoxin LTQ54_RS06250 PF05525 Branched-chain amino acid transport protein LTQ54_RS06255 PF05175 Methyltransferase small domain LTQ54_RS06260 PF00270 DEAD/DEAH box helicase LTQ54_RS06260 PF00271 Helicase conserved C-terminal domain LTQ54_RS06265 PF03883 Peroxide stress protein YaaA LTQ54_RS06270 PF01235 Sodium:alanine symporter family LTQ54_RS06285 PF03167 Uracil DNA glycosylase superfamily LTQ54_RS06290 PF01261 Xylose isomerase-like TIM barrel LTQ54_RS06295 PF01228 Glycine radical LTQ54_RS06300 PF14821 Threonine synthase N terminus LTQ54_RS06300 PF00291 Pyridoxal-phosphate dependent enzyme LTQ54_RS06305 PF00288 GHMP kinases N terminal domain LTQ54_RS06305 PF08544 GHMP kinases C terminal LTQ54_RS06310 PF00696 Amino acid kinase family LTQ54_RS06310 PF13840 ACT domain LTQ54_RS06310 PF00742 Homoserine dehydrogenase LTQ54_RS06310 PF03447 Homoserine dehydrogenase, NAD binding domain LTQ54_RS06310 PF01842 ACT domain LTQ54_RS06320 PF03737 Aldolase/RraA LTQ54_RS06325 PF00072 Response regulator receiver domain LTQ54_RS06325 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS06335 PF18415 Histidine kinase receptor ArcB trans-membrane domain LTQ54_RS06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS06335 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS06335 PF01627 Hpt domain LTQ54_RS06335 PF00989 PAS fold LTQ54_RS06335 PF00072 Response regulator receiver domain LTQ54_RS06340 PF00563 EAL domain LTQ54_RS06340 PF01590 GAF domain LTQ54_RS06340 PF00360 Phytochrome region LTQ54_RS06340 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS06345 PF16199 Radical_SAM C-terminal domain LTQ54_RS06345 PF04055 Radical SAM superfamily LTQ54_RS06350 PF04898 Glutamate synthase central domain LTQ54_RS06350 PF00310 Glutamine amidotransferases class-II LTQ54_RS06350 PF01645 Conserved region in glutamate synthase LTQ54_RS06350 PF01493 GXGXG motif LTQ54_RS06355 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LTQ54_RS06355 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_RS06360 PF00310 Glutamine amidotransferases class-II LTQ54_RS06360 PF04898 Glutamate synthase central domain LTQ54_RS06360 PF01645 Conserved region in glutamate synthase LTQ54_RS06360 PF01493 GXGXG motif LTQ54_RS06365 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_RS06365 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LTQ54_RS06375 PF01048 Phosphorylase superfamily LTQ54_RS06385 PF01497 Periplasmic binding protein LTQ54_RS06390 PF03458 UPF0126 domain LTQ54_RS06400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS06400 PF03466 LysR substrate binding domain LTQ54_RS06405 PF01925 Sulfite exporter TauE/SafE LTQ54_RS06410 PF02142 MGS-like domain LTQ54_RS06410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LTQ54_RS06410 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LTQ54_RS06415 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LTQ54_RS06415 PF00117 Glutamine amidotransferase class-I LTQ54_RS06420 PF01113 Dihydrodipicolinate reductase, N-terminus LTQ54_RS06420 PF05173 Dihydrodipicolinate reductase, C-terminus LTQ54_RS06425 PF00293 NUDIX domain LTQ54_RS06430 PF07516 SecA Wing and Scaffold domain LTQ54_RS06430 PF07517 SecA DEAD-like domain LTQ54_RS06430 PF02810 SEC-C motif LTQ54_RS06430 PF01043 SecA preprotein cross-linking domain LTQ54_RS06435 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LTQ54_RS06440 PF00091 Tubulin/FtsZ family, GTPase domain LTQ54_RS06440 PF12327 FtsZ family, C-terminal domain LTQ54_RS06445 PF02491 SHS2 domain inserted in FTSA LTQ54_RS06450 PF03799 Cell division protein FtsQ LTQ54_RS06450 PF08478 POTRA domain, FtsQ-type LTQ54_RS06455 PF02875 Mur ligase family, glutamate ligase domain LTQ54_RS06455 PF01225 Mur ligase family, catalytic domain LTQ54_RS06455 PF08245 Mur ligase middle domain LTQ54_RS06460 PF04101 Glycosyltransferase family 28 C-terminal domain LTQ54_RS06460 PF03033 Glycosyltransferase family 28 N-terminal domain LTQ54_RS06465 PF01098 Cell cycle protein LTQ54_RS06470 PF08245 Mur ligase middle domain LTQ54_RS06470 PF02875 Mur ligase family, glutamate ligase domain LTQ54_RS06475 PF00953 Glycosyl transferase family 4 LTQ54_RS06475 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LTQ54_RS06480 PF01225 Mur ligase family, catalytic domain LTQ54_RS06480 PF02875 Mur ligase family, glutamate ligase domain LTQ54_RS06480 PF08245 Mur ligase middle domain LTQ54_RS06485 PF01225 Mur ligase family, catalytic domain LTQ54_RS06485 PF02875 Mur ligase family, glutamate ligase domain LTQ54_RS06485 PF08245 Mur ligase middle domain LTQ54_RS06490 PF03717 Penicillin-binding Protein dimerisation domain LTQ54_RS06490 PF00905 Penicillin binding protein transpeptidase domain LTQ54_RS06495 PF04999 Cell division protein FtsL LTQ54_RS06500 PF01795 MraW methylase family LTQ54_RS06510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LTQ54_RS06515 PF04348 LppC putative lipoprotein LTQ54_RS06520 PF02021 Uncharacterised protein family UPF0102 LTQ54_RS06525 PF13580 SIS domain LTQ54_RS06530 PF04972 BON domain LTQ54_RS06535 PF04386 Stringent starvation protein B LTQ54_RS06540 PF00043 Glutathione S-transferase, C-terminal domain LTQ54_RS06540 PF02798 Glutathione S-transferase, N-terminal domain LTQ54_RS06545 PF02167 Cytochrome C1 family LTQ54_RS06550 PF00032 Cytochrome b(C-terminal)/b6/petD LTQ54_RS06550 PF00033 Cytochrome b/b6/petB LTQ54_RS06555 PF00355 Rieske [2Fe-2S] domain LTQ54_RS06555 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LTQ54_RS06560 PF00380 Ribosomal protein S9/S16 LTQ54_RS06565 PF00572 Ribosomal protein L13 LTQ54_RS06570 PF03969 AFG1-like ATPase LTQ54_RS06575 PF06295 Protein of unknown function (DUF1043) LTQ54_RS06580 PF00595 PDZ domain LTQ54_RS06585 PF13180 PDZ domain LTQ54_RS06590 PF03989 DNA gyrase C-terminal domain, beta-propeller LTQ54_RS06590 PF00521 DNA gyrase/topoisomerase IV, subunit A LTQ54_RS06595 PF01751 Toprim domain LTQ54_RS06595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS06595 PF00986 DNA gyrase B subunit, carboxyl terminus LTQ54_RS06595 PF00204 DNA gyrase B LTQ54_RS06600 PF05728 Uncharacterised protein family (UPF0227) LTQ54_RS06605 PF00149 Calcineurin-like phosphoesterase LTQ54_RS06610 PF06853 Protein of unknown function (DUF1249) LTQ54_RS06615 PF00293 NUDIX domain LTQ54_RS06620 PF02321 Outer membrane efflux protein LTQ54_RS06625 PF01467 Cytidylyltransferase-like LTQ54_RS06625 PF00294 pfkB family carbohydrate kinase LTQ54_RS06630 PF08335 GlnD PII-uridylyltransferase LTQ54_RS06630 PF03710 Glutamate-ammonia ligase adenylyltransferase LTQ54_RS06635 PF02743 Cache domain LTQ54_RS06635 PF00672 HAMP domain LTQ54_RS06635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS06640 PF07885 Ion channel LTQ54_RS06645 PF01928 CYTH domain LTQ54_RS06650 PF01865 Protein of unknown function DUF47 LTQ54_RS06655 PF01384 Phosphate transporter family LTQ54_RS06660 PF08239 Bacterial SH3 domain LTQ54_RS06670 PF13401 AAA domain LTQ54_RS06670 PF01471 Putative peptidoglycan binding domain LTQ54_RS06675 PF01966 HD domain LTQ54_RS06675 PF01743 Poly A polymerase head domain LTQ54_RS06675 PF12627 Probable RNA and SrmB- binding site of polymerase A LTQ54_RS06680 PF02673 Bacitracin resistance protein BacA LTQ54_RS06685 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LTQ54_RS06690 PF02152 Dihydroneopterin aldolase LTQ54_RS06695 PF02660 Glycerol-3-phosphate acyltransferase LTQ54_RS06700 PF12697 Alpha/beta hydrolase family LTQ54_RS06705 PF00814 Glycoprotease family LTQ54_RS06710 PF01165 Ribosomal protein S21 LTQ54_RS06715 PF09424 Yqey-like protein LTQ54_RS06720 PF01807 CHC2 zinc finger LTQ54_RS06720 PF08275 DNA primase catalytic core, N-terminal domain LTQ54_RS06720 PF08278 DNA primase DnaG DnaB-binding LTQ54_RS06720 PF10410 DnaB-helicase binding domain of primase LTQ54_RS06725 PF00140 Sigma-70 factor, region 1.2 LTQ54_RS06725 PF03979 Sigma-70 factor, region 1.1 LTQ54_RS06725 PF04542 Sigma-70 region 2 LTQ54_RS06725 PF04539 Sigma-70 region 3 LTQ54_RS06725 PF04545 Sigma-70, region 4 LTQ54_RS06725 PF04546 Sigma-70, non-essential region LTQ54_RS06735 PF01053 Cys/Met metabolism PLP-dependent enzyme LTQ54_RS06740 PF01380 SIS domain LTQ54_RS06745 PF08220 DeoR-like helix-turn-helix domain LTQ54_RS06745 PF00455 DeoR C terminal sensor domain LTQ54_RS06750 PF00224 Pyruvate kinase, barrel domain LTQ54_RS06750 PF02887 Pyruvate kinase, alpha/beta domain LTQ54_RS06755 PF07729 FCD domain LTQ54_RS06755 PF00392 Bacterial regulatory proteins, gntR family LTQ54_RS06760 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS06760 PF17158 Membrane-associated sensor, integral membrane domain LTQ54_RS06765 PF10369 Small subunit of acetolactate synthase LTQ54_RS06770 PF00205 Thiamine pyrophosphate enzyme, central domain LTQ54_RS06770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LTQ54_RS06770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LTQ54_RS06775 PF00501 AMP-binding enzyme LTQ54_RS06780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS06780 PF03466 LysR substrate binding domain LTQ54_RS06790 PF01569 PAP2 superfamily LTQ54_RS06795 PF00873 AcrB/AcrD/AcrF family LTQ54_RS06810 PF08502 LeuA allosteric (dimerisation) domain LTQ54_RS06810 PF00682 HMGL-like LTQ54_RS06815 PF00180 Isocitrate/isopropylmalate dehydrogenase LTQ54_RS06820 PF00330 Aconitase family (aconitate hydratase) LTQ54_RS06825 PF00694 Aconitase C-terminal domain LTQ54_RS06840 PF05099 Tellurite resistance protein TerB LTQ54_RS06840 PF00226 DnaJ domain LTQ54_RS06845 PF03968 OstA-like protein LTQ54_RS06845 PF04453 LPS transport system D LTQ54_RS06850 PF00639 PPIC-type PPIASE domain LTQ54_RS06850 PF09312 SurA N-terminal domain LTQ54_RS06855 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LTQ54_RS06860 PF00398 Ribosomal RNA adenine dimethylase LTQ54_RS06865 PF04379 ApaG domain LTQ54_RS06870 PF00149 Calcineurin-like phosphoesterase LTQ54_RS06875 PF00186 Dihydrofolate reductase LTQ54_RS06880 PF12821 Threonine/Serine exporter, ThrE LTQ54_RS06885 PF06738 Putative threonine/serine exporter LTQ54_RS06890 PF01018 GTP1/OBG LTQ54_RS06890 PF01926 50S ribosome-binding GTPase LTQ54_RS06895 PF01016 Ribosomal L27 protein LTQ54_RS06900 PF00829 Ribosomal prokaryotic L21 protein LTQ54_RS06905 PF00348 Polyprenyl synthetase LTQ54_RS06915 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LTQ54_RS06915 PF00056 lactate/malate dehydrogenase, NAD binding domain LTQ54_RS06920 PF01316 Arginine repressor, DNA binding domain LTQ54_RS06920 PF02863 Arginine repressor, C-terminal domain LTQ54_RS06935 PF00582 Universal stress protein family LTQ54_RS06940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LTQ54_RS06940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LTQ54_RS06945 PF00849 RNA pseudouridylate synthase LTQ54_RS06955 PF18337 RapA N-terminal Tudor like domain LTQ54_RS06955 PF18339 RapA N-terminal Tudor like domain 1 LTQ54_RS06955 PF00176 SNF2 family N-terminal domain LTQ54_RS06955 PF12137 RNA polymerase recycling family C-terminal LTQ54_RS06955 PF00271 Helicase conserved C-terminal domain LTQ54_RS06960 PF13638 PIN domain LTQ54_RS06960 PF02562 PhoH-like protein LTQ54_RS06965 PF13006 Insertion element 4 transposase N-terminal LTQ54_RS06965 PF01609 Transposase DDE domain LTQ54_RS06970 PF01523 Putative modulator of DNA gyrase LTQ54_RS06975 PF00795 Carbon-nitrogen hydrolase LTQ54_RS06990 PF02545 Maf-like protein LTQ54_RS06995 PF04093 rod shape-determining protein MreD LTQ54_RS07000 PF04085 rod shape-determining protein MreC LTQ54_RS07035 PF07963 Prokaryotic N-terminal methylation motif LTQ54_RS07040 PF07963 Prokaryotic N-terminal methylation motif LTQ54_RS07050 PF00482 Type II secretion system (T2SS), protein F LTQ54_RS07055 PF00437 Type II/IV secretion system protein LTQ54_RS07055 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LTQ54_RS07065 PF13401 AAA domain LTQ54_RS07065 PF01471 Putative peptidoglycan binding domain LTQ54_RS07070 PF00263 Bacterial type II and III secretion system protein LTQ54_RS07070 PF03958 Bacterial type II/III secretion system short domain LTQ54_RS07090 PF00563 EAL domain LTQ54_RS07090 PF17157 Gammaproteobacterial periplasmic sensor domain LTQ54_RS07090 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS07095 PF00436 Single-strand binding protein family LTQ54_RS07100 PF00196 Bacterial regulatory proteins, luxR family LTQ54_RS07105 PF00483 Nucleotidyl transferase LTQ54_RS07110 PF17755 UvrA DNA-binding domain LTQ54_RS07110 PF17760 UvrA interaction domain LTQ54_RS07110 PF00005 ABC transporter LTQ54_RS07120 PF00266 Aminotransferase class-V LTQ54_RS07125 PF00696 Amino acid kinase family LTQ54_RS07125 PF01842 ACT domain LTQ54_RS07130 PF02574 Homocysteine S-methyltransferase LTQ54_RS07130 PF02310 B12 binding domain LTQ54_RS07130 PF02607 B12 binding domain LTQ54_RS07130 PF02965 Vitamin B12 dependent methionine synthase, activation domain LTQ54_RS07130 PF00809 Pterin binding enzyme LTQ54_RS07135 PF00999 Sodium/hydrogen exchanger family LTQ54_RS07210 PF01507 Phosphoadenosine phosphosulfate reductase family LTQ54_RS07215 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LTQ54_RS07215 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LTQ54_RS07220 PF00667 FAD binding domain LTQ54_RS07220 PF00258 Flavodoxin LTQ54_RS07220 PF00175 Oxidoreductase NAD-binding domain LTQ54_RS07235 PF09583 Phage shock protein G (Phageshock_PspG) LTQ54_RS07240 PF01207 Dihydrouridine synthase (Dus) LTQ54_RS07280 PF01475 Ferric uptake regulator family LTQ54_RS07290 PF00342 Phosphoglucose isomerase LTQ54_RS07295 PF01894 Uncharacterised protein family UPF0047 LTQ54_RS07305 PF00842 Alanine racemase, C-terminal domain LTQ54_RS07305 PF01168 Alanine racemase, N-terminal domain LTQ54_RS07310 PF00772 DnaB-like helicase N terminal domain LTQ54_RS07310 PF03796 DnaB-like helicase C terminal domain LTQ54_RS07320 PF03948 Ribosomal protein L9, C-terminal domain LTQ54_RS07320 PF01281 Ribosomal protein L9, N-terminal domain LTQ54_RS07325 PF01084 Ribosomal protein S18 LTQ54_RS07330 PF01250 Ribosomal protein S6 LTQ54_RS07335 PF00588 SpoU rRNA Methylase family LTQ54_RS07335 PF08032 RNA 2'-O ribose methyltransferase substrate binding LTQ54_RS07340 PF17876 Cold shock domain LTQ54_RS07340 PF08461 Ribonuclease R winged-helix domain LTQ54_RS07340 PF08206 Ribonuclease B OB domain LTQ54_RS07340 PF00773 RNB domain LTQ54_RS07340 PF00575 S1 RNA binding domain LTQ54_RS07345 PF01979 Amidohydrolase family LTQ54_RS07350 PF08238 Sel1 repeat LTQ54_RS07355 PF00709 Adenylosuccinate synthetase LTQ54_RS07360 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) LTQ54_RS07365 PF01145 SPFH domain / Band 7 family LTQ54_RS07370 PF01145 SPFH domain / Band 7 family LTQ54_RS07370 PF12221 Bacterial membrane protein N terminal LTQ54_RS07375 PF16360 GTP-binding GTPase Middle Region LTQ54_RS07375 PF13167 GTP-binding GTPase N-terminal LTQ54_RS07375 PF01926 50S ribosome-binding GTPase LTQ54_RS07380 PF17209 Hfq protein LTQ54_RS07390 PF01119 DNA mismatch repair protein, C-terminal domain LTQ54_RS07390 PF08676 MutL C terminal dimerisation domain LTQ54_RS07395 PF01520 N-acetylmuramoyl-L-alanine amidase LTQ54_RS07400 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LTQ54_RS07405 PF08331 Domain of unknown function (DUF1730) LTQ54_RS07495 PF00929 Exonuclease LTQ54_RS07500 PF03193 RsgA GTPase LTQ54_RS07505 PF02666 Phosphatidylserine decarboxylase LTQ54_RS07510 PF03600 Citrate transporter LTQ54_RS07510 PF02080 TrkA-C domain LTQ54_RS07515 PF00672 HAMP domain LTQ54_RS07515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS07525 PF00152 tRNA synthetases class II (D, K and N) LTQ54_RS07530 PF00890 FAD binding domain LTQ54_RS07530 PF02910 Fumarate reductase flavoprotein C-term LTQ54_RS07535 PF13085 2Fe-2S iron-sulfur cluster binding domain LTQ54_RS07535 PF13183 4Fe-4S dicluster domain LTQ54_RS07540 PF02300 Fumarate reductase subunit C LTQ54_RS07545 PF02313 Fumarate reductase subunit D LTQ54_RS07550 PF08207 Elongation factor P (EF-P) KOW-like domain LTQ54_RS07550 PF01132 Elongation factor P (EF-P) OB domain LTQ54_RS07550 PF09285 Elongation factor P, C-terminal LTQ54_RS07555 PF04055 Radical SAM superfamily LTQ54_RS07560 PF02308 MgtC family LTQ54_RS07565 PF00563 EAL domain LTQ54_RS07565 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS07565 PF13426 PAS domain LTQ54_RS07575 PF08448 PAS fold LTQ54_RS07575 PF00563 EAL domain LTQ54_RS07575 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS07575 PF05231 MASE1 LTQ54_RS07575 PF08447 PAS fold LTQ54_RS07575 PF13426 PAS domain LTQ54_RS07580 PF00118 TCP-1/cpn60 chaperonin family LTQ54_RS07585 PF00166 Chaperonin 10 Kd subunit LTQ54_RS07590 PF01554 MatE LTQ54_RS07595 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LTQ54_RS07595 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LTQ54_RS07605 PF01676 Metalloenzyme superfamily LTQ54_RS07605 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LTQ54_RS07610 PF02719 Polysaccharide biosynthesis protein LTQ54_RS07615 PF02397 Bacterial sugar transferase LTQ54_RS07620 PF01370 NAD dependent epimerase/dehydratase family LTQ54_RS07630 PF01370 NAD dependent epimerase/dehydratase family LTQ54_RS07635 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LTQ54_RS07635 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LTQ54_RS07635 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LTQ54_RS07650 PF00534 Glycosyl transferases group 1 LTQ54_RS07650 PF13439 Glycosyltransferase Family 4 LTQ54_RS07665 PF01943 Polysaccharide biosynthesis protein LTQ54_RS07675 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LTQ54_RS07680 PF05523 WxcM-like, C-terminal LTQ54_RS07685 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LTQ54_RS07690 PF04321 RmlD substrate binding domain LTQ54_RS07695 PF00483 Nucleotidyl transferase LTQ54_RS07700 PF16363 GDP-mannose 4,6 dehydratase LTQ54_RS07730 PF13807 G-rich domain on putative tyrosine kinase LTQ54_RS07730 PF13614 AAA domain LTQ54_RS07730 PF02706 Chain length determinant protein LTQ54_RS07735 PF01451 Low molecular weight phosphotyrosine protein phosphatase LTQ54_RS07740 PF10531 SLBB domain LTQ54_RS07740 PF02563 Polysaccharide biosynthesis/export protein LTQ54_RS07740 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LTQ54_RS07745 PF06082 Exopolysaccharide biosynthesis protein YbjH LTQ54_RS07765 PF00581 Rhodanese-like domain LTQ54_RS07770 PF02556 Preprotein translocase subunit SecB LTQ54_RS07775 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LTQ54_RS07775 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LTQ54_RS07780 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_RS07780 PF06426 Serine acetyltransferase, N-terminal LTQ54_RS07785 PF01551 Peptidase family M23 LTQ54_RS07790 PF08360 QacR-like protein, C-terminal region LTQ54_RS07790 PF00440 Bacterial regulatory proteins, tetR family LTQ54_RS07795 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LTQ54_RS07795 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LTQ54_RS07795 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LTQ54_RS07800 PF01370 NAD dependent epimerase/dehydratase family LTQ54_RS07805 PF03279 Bacterial lipid A biosynthesis acyltransferase LTQ54_RS07810 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LTQ54_RS07815 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LTQ54_RS07825 PF08666 SAF domain LTQ54_RS07825 PF03102 NeuB family LTQ54_RS07835 PF02348 Cytidylyltransferase LTQ54_RS07840 PF00977 Histidine biosynthesis protein LTQ54_RS07845 PF00117 Glutamine amidotransferase class-I LTQ54_RS07855 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LTQ54_RS07860 PF02719 Polysaccharide biosynthesis protein LTQ54_RS07875 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LTQ54_RS07880 PF00535 Glycosyl transferase family 2 LTQ54_RS07885 PF00535 Glycosyl transferase family 2 LTQ54_RS07890 PF01467 Cytidylyltransferase-like LTQ54_RS07895 PF05686 Glycosyl transferase family 90 LTQ54_RS07900 PF01219 Prokaryotic diacylglycerol kinase LTQ54_RS07910 PF06827 Zinc finger found in FPG and IleRS LTQ54_RS07910 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LTQ54_RS07910 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LTQ54_RS07920 PF00471 Ribosomal protein L33 LTQ54_RS07925 PF00830 Ribosomal L28 family LTQ54_RS07930 PF04002 RadC-like JAB domain LTQ54_RS07935 PF04127 DNA / pantothenate metabolism flavoprotein LTQ54_RS07935 PF02441 Flavoprotein LTQ54_RS07940 PF00440 Bacterial regulatory proteins, tetR family LTQ54_RS07945 PF03279 Bacterial lipid A biosynthesis acyltransferase LTQ54_RS07950 PF00156 Phosphoribosyl transferase domain LTQ54_RS07955 PF03725 3' exoribonuclease family, domain 2 LTQ54_RS07955 PF01138 3' exoribonuclease family, domain 1 LTQ54_RS07960 PF03755 YicC-like family, N-terminal region LTQ54_RS07960 PF08340 Domain of unknown function (DUF1732) LTQ54_RS07965 PF00313 'Cold-shock' DNA-binding domain LTQ54_RS07995 PF00860 Permease family LTQ54_RS08000 PF00625 Guanylate kinase LTQ54_RS08005 PF01192 RNA polymerase Rpb6 LTQ54_RS08010 PF02824 TGS domain LTQ54_RS08010 PF04607 Region found in RelA / SpoT proteins LTQ54_RS08010 PF13291 ACT domain LTQ54_RS08015 PF00270 DEAD/DEAH box helicase LTQ54_RS08015 PF00271 Helicase conserved C-terminal domain LTQ54_RS08015 PF17191 RecG wedge domain LTQ54_RS08020 PF00672 HAMP domain LTQ54_RS08020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS08020 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS08025 PF00072 Response regulator receiver domain LTQ54_RS08025 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS08030 PF03449 Transcription elongation factor, N-terminal LTQ54_RS08030 PF01272 Transcription elongation factor, GreA/GreB, C-term LTQ54_RS08035 PF17674 HHH domain LTQ54_RS08035 PF00575 S1 RNA binding domain LTQ54_RS08035 PF16921 Tex protein YqgF-like domain LTQ54_RS08035 PF09371 Tex-like protein N-terminal domain LTQ54_RS08045 PF00561 alpha/beta hydrolase fold LTQ54_RS08050 PF00156 Phosphoribosyl transferase domain LTQ54_RS08055 PF01521 Iron-sulphur cluster biosynthesis LTQ54_RS08055 PF01106 NifU-like domain LTQ54_RS08060 PF00293 NUDIX domain LTQ54_RS08065 PF00459 Inositol monophosphatase family LTQ54_RS08075 PF01203 Type II secretion system (T2SS), protein N LTQ54_RS08080 PF04612 Type II secretion system (T2SS), protein M LTQ54_RS08085 PF12693 GspL periplasmic domain LTQ54_RS08085 PF05134 Type II secretion system (T2SS), protein L LTQ54_RS08090 PF03934 Type II secretion system (T2SS), protein K LTQ54_RS08095 PF11612 Type II secretion system (T2SS), protein J LTQ54_RS08095 PF07963 Prokaryotic N-terminal methylation motif LTQ54_RS08100 PF07963 Prokaryotic N-terminal methylation motif LTQ54_RS08100 PF02501 Type II secretion system (T2SS), protein I LTQ54_RS08105 PF12019 Type II transport protein GspH LTQ54_RS08110 PF07963 Prokaryotic N-terminal methylation motif LTQ54_RS08110 PF08334 Type II secretion system (T2SS), protein G LTQ54_RS08115 PF00482 Type II secretion system (T2SS), protein F LTQ54_RS08120 PF00437 Type II/IV secretion system protein LTQ54_RS08125 PF00263 Bacterial type II and III secretion system protein LTQ54_RS08125 PF03958 Bacterial type II/III secretion system short domain LTQ54_RS08130 PF11356 Type II secretion system protein C LTQ54_RS08135 PF01479 S4 domain LTQ54_RS08140 PF01430 Hsp33 protein LTQ54_RS08145 PF01293 Phosphoenolpyruvate carboxykinase LTQ54_RS08155 PF00583 Acetyltransferase (GNAT) family LTQ54_RS08155 PF09500 Putative thioesterase (yiiD_Cterm) LTQ54_RS08160 PF02580 D-Tyr-tRNA(Tyr) deacylase LTQ54_RS08165 PF03631 Virulence factor BrkB LTQ54_RS08180 PF00679 Elongation factor G C-terminus LTQ54_RS08180 PF00009 Elongation factor Tu GTP binding domain LTQ54_RS08180 PF03144 Elongation factor Tu domain 2 LTQ54_RS08185 PF00120 Glutamine synthetase, catalytic domain LTQ54_RS08185 PF03951 Glutamine synthetase, beta-Grasp domain LTQ54_RS08195 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS08195 PF00989 PAS fold LTQ54_RS08195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS08200 PF00158 Sigma-54 interaction domain LTQ54_RS08200 PF00072 Response regulator receiver domain LTQ54_RS08200 PF02954 Bacterial regulatory protein, Fis family LTQ54_RS08205 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS08205 PF00563 EAL domain LTQ54_RS08205 PF03707 Bacterial signalling protein N terminal repeat LTQ54_RS08210 PF06969 HemN C-terminal domain LTQ54_RS08210 PF04055 Radical SAM superfamily LTQ54_RS08215 PF10675 Protein of unknown function (DUF2489) LTQ54_RS08220 PF04220 Der GTPase activator (YihI) LTQ54_RS08230 PF00034 Cytochrome c LTQ54_RS08235 PF01926 50S ribosome-binding GTPase LTQ54_RS08245 PF01367 5'-3' exonuclease, C-terminal SAM fold LTQ54_RS08245 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LTQ54_RS08245 PF00476 DNA polymerase family A LTQ54_RS08245 PF01612 3'-5' exonuclease LTQ54_RS08255 PF00490 Delta-aminolevulinic acid dehydratase LTQ54_RS08260 PF01026 TatD related DNase LTQ54_RS08265 PF00902 Sec-independent protein translocase protein (TatC) LTQ54_RS08270 PF02416 mttA/Hcf106 family LTQ54_RS08275 PF02416 mttA/Hcf106 family LTQ54_RS08280 PF03109 ABC1 family LTQ54_RS08285 PF02036 SCP-2 sterol transfer family LTQ54_RS08290 PF01209 ubiE/COQ5 methyltransferase family LTQ54_RS08295 PF02646 RmuC family LTQ54_RS08310 PF10625 Universal stress protein B (UspB) LTQ54_RS08315 PF00210 Ferritin-like domain LTQ54_RS08320 PF00582 Universal stress protein family LTQ54_RS08325 PF00892 EamA-like transporter family LTQ54_RS08335 PF04445 Putative SAM-dependent methyltransferase LTQ54_RS08340 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS08340 PF00563 EAL domain LTQ54_RS08340 PF08448 PAS fold LTQ54_RS08345 PF01037 Lrp/AsnC ligand binding domain LTQ54_RS08350 PF01432 Peptidase family M3 LTQ54_RS08355 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LTQ54_RS08360 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_RS08360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LTQ54_RS08365 PF00069 Protein kinase domain LTQ54_RS08380 PF03116 NQR2, RnfD, RnfE family LTQ54_RS08385 PF03793 PASTA domain LTQ54_RS08385 PF00069 Protein kinase domain LTQ54_RS08420 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS08420 PF12911 N-terminal TM domain of oligopeptide transport permease C LTQ54_RS08425 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS08430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_RS08435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_RS08435 PF00005 ABC transporter LTQ54_RS08465 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LTQ54_RS08470 PF00580 UvrD/REP helicase N-terminal domain LTQ54_RS08470 PF13361 UvrD-like helicase C-terminal domain LTQ54_RS08475 PF00440 Bacterial regulatory proteins, tetR family LTQ54_RS08480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LTQ54_RS08485 PF00873 AcrB/AcrD/AcrF family LTQ54_RS08490 PF04380 Membrane fusogenic activity LTQ54_RS08495 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LTQ54_RS08495 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LTQ54_RS08500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS08500 PF03466 LysR substrate binding domain LTQ54_RS08545 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_RS08550 PF07369 Protein of unknown function (DUF1488) LTQ54_RS08555 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LTQ54_RS08555 PF01488 Shikimate / quinate 5-dehydrogenase LTQ54_RS08555 PF08501 Shikimate dehydrogenase substrate binding domain LTQ54_RS08560 PF01218 Coproporphyrinogen III oxidase LTQ54_RS08565 PF01300 Telomere recombination LTQ54_RS08570 PF00731 AIR carboxylase LTQ54_RS08575 PF02222 ATP-grasp domain LTQ54_RS08575 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LTQ54_RS08580 PF01396 Topoisomerase DNA binding C4 zinc finger LTQ54_RS08585 PF04361 Protein of unknown function (DUF494) LTQ54_RS08590 PF02481 DNA recombination-mediator protein A LTQ54_RS08590 PF17782 DprA winged helix domain LTQ54_RS08600 PF01327 Polypeptide deformylase LTQ54_RS08605 PF02911 Formyl transferase, C-terminal domain LTQ54_RS08605 PF00551 Formyl transferase LTQ54_RS08610 PF01189 16S rRNA methyltransferase RsmB/F LTQ54_RS08610 PF01029 NusB family LTQ54_RS08615 PF02080 TrkA-C domain LTQ54_RS08615 PF02254 TrkA-N domain LTQ54_RS08620 PF02386 Cation transport protein LTQ54_RS08630 PF03006 Haemolysin-III related LTQ54_RS08635 PF07070 SpoOM protein LTQ54_RS08645 PF06288 Protein of unknown function (DUF1040) LTQ54_RS08650 PF13746 4Fe-4S dicluster domain LTQ54_RS08650 PF12801 4Fe-4S binding domain LTQ54_RS08650 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LTQ54_RS08655 PF01636 Phosphotransferase enzyme family LTQ54_RS08660 PF01323 DSBA-like thioredoxin domain LTQ54_RS08670 PF01078 Magnesium chelatase, subunit ChlI LTQ54_RS08670 PF13335 Magnesium chelatase, subunit ChlI C-terminal LTQ54_RS08675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LTQ54_RS08675 PF00205 Thiamine pyrophosphate enzyme, central domain LTQ54_RS08675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LTQ54_RS08685 PF01063 Amino-transferase class IV LTQ54_RS08690 PF00920 Dehydratase family LTQ54_RS08695 PF00585 C-terminal regulatory domain of Threonine dehydratase LTQ54_RS08695 PF00291 Pyridoxal-phosphate dependent enzyme LTQ54_RS08700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS08700 PF03466 LysR substrate binding domain LTQ54_RS08705 PF07690 Major Facilitator Superfamily LTQ54_RS08710 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_RS08710 PF12804 MobA-like NTP transferase domain LTQ54_RS08715 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LTQ54_RS08715 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LTQ54_RS08720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LTQ54_RS08720 PF02874 ATP synthase alpha/beta family, beta-barrel domain LTQ54_RS08725 PF00231 ATP synthase LTQ54_RS08730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LTQ54_RS08730 PF00306 ATP synthase alpha/beta chain, C terminal domain LTQ54_RS08730 PF02874 ATP synthase alpha/beta family, beta-barrel domain LTQ54_RS08735 PF00213 ATP synthase delta (OSCP) subunit LTQ54_RS08740 PF00430 ATP synthase B/B' CF(0) LTQ54_RS08745 PF00137 ATP synthase subunit C LTQ54_RS08750 PF00119 ATP synthase A chain LTQ54_RS08755 PF03899 ATP synthase I chain LTQ54_RS08760 PF17762 HTH domain found in ParB protein LTQ54_RS08760 PF02195 ParB-like nuclease domain LTQ54_RS08765 PF13614 AAA domain LTQ54_RS08770 PF02527 rRNA small subunit methyltransferase G LTQ54_RS08775 PF01134 Glucose inhibited division protein A LTQ54_RS08775 PF13932 GidA associated domain LTQ54_RS08780 PF00258 Flavodoxin LTQ54_RS08785 PF12631 MnmE helical domain LTQ54_RS08785 PF10396 GTP-binding protein TrmE N-terminus LTQ54_RS08785 PF01926 50S ribosome-binding GTPase LTQ54_RS08790 PF02096 60Kd inner membrane protein LTQ54_RS08790 PF14849 YidC periplasmic domain LTQ54_RS08795 PF01809 Putative membrane protein insertion efficiency factor LTQ54_RS08800 PF00825 Ribonuclease P LTQ54_RS08805 PF00468 Ribosomal protein L34 LTQ54_RS08810 PF00005 ABC transporter LTQ54_RS08815 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS08820 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_RS08825 PF00308 Bacterial dnaA protein LTQ54_RS08825 PF11638 DnaA N-terminal domain LTQ54_RS08825 PF08299 Bacterial dnaA protein helix-turn-helix LTQ54_RS08830 PF00712 DNA polymerase III beta subunit, N-terminal domain LTQ54_RS08830 PF02767 DNA polymerase III beta subunit, central domain LTQ54_RS08830 PF02768 DNA polymerase III beta subunit, C-terminal domain LTQ54_RS08835 PF02463 RecF/RecN/SMC N terminal domain LTQ54_RS08840 PF00204 DNA gyrase B LTQ54_RS08840 PF00986 DNA gyrase B subunit, carboxyl terminus LTQ54_RS08840 PF18053 DNA gyrase B subunit insert domain LTQ54_RS08840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS08840 PF01751 Toprim domain LTQ54_RS08845 PF00011 Hsp20/alpha crystallin family LTQ54_RS08850 PF00155 Aminotransferase class I and II LTQ54_RS08855 PF00128 Alpha amylase, catalytic domain LTQ54_RS08860 PF05746 DALR anticodon binding domain LTQ54_RS08860 PF02092 Glycyl-tRNA synthetase beta subunit LTQ54_RS08865 PF02091 Glycyl-tRNA synthetase alpha subunit LTQ54_RS08870 PF01169 Uncharacterized protein family UPF0016 LTQ54_RS08880 PF01206 Sulfurtransferase TusA LTQ54_RS08890 PF03466 LysR substrate binding domain LTQ54_RS08890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS08895 PF08240 Alcohol dehydrogenase GroES-like domain LTQ54_RS08895 PF00107 Zinc-binding dehydrogenase LTQ54_RS08900 PF00108 Thiolase, N-terminal domain LTQ54_RS08900 PF02803 Thiolase, C-terminal domain LTQ54_RS08905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LTQ54_RS08905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LTQ54_RS08905 PF00378 Enoyl-CoA hydratase/isomerase LTQ54_RS08910 PF09186 Domain of unknown function (DUF1949) LTQ54_RS08910 PF01205 Uncharacterized protein family UPF0029 LTQ54_RS08915 PF02386 Cation transport protein LTQ54_RS08920 PF12724 Flavodoxin domain LTQ54_RS08965 PF07731 Multicopper oxidase LTQ54_RS08965 PF00394 Multicopper oxidase LTQ54_RS08965 PF07732 Multicopper oxidase LTQ54_RS08970 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LTQ54_RS08975 PF13667 ThiC-associated domain LTQ54_RS08975 PF01964 Radical SAM ThiC family LTQ54_RS08980 PF02581 Thiamine monophosphate synthase LTQ54_RS08985 PF00899 ThiF family LTQ54_RS08990 PF02597 ThiS family LTQ54_RS08995 PF05690 Thiazole biosynthesis protein ThiG LTQ54_RS09000 PF06968 Biotin and Thiamin Synthesis associated domain LTQ54_RS09000 PF04055 Radical SAM superfamily LTQ54_RS09005 PF00557 Metallopeptidase family M24 LTQ54_RS09005 PF01321 Creatinase/Prolidase N-terminal domain LTQ54_RS09005 PF00557 Metallopeptidase family M24 LTQ54_RS09005 PF01321 Creatinase/Prolidase N-terminal domain LTQ54_RS09010 PF03466 LysR substrate binding domain LTQ54_RS09010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS09015 PF07690 Major Facilitator Superfamily LTQ54_RS09035 PF05114 Protein of unknown function (DUF692) LTQ54_RS09045 PF13361 UvrD-like helicase C-terminal domain LTQ54_RS09045 PF00580 UvrD/REP helicase N-terminal domain LTQ54_RS09050 PF08534 Redoxin LTQ54_RS09060 PF01810 LysE type translocator LTQ54_RS09065 PF12833 Helix-turn-helix domain LTQ54_RS09065 PF02311 AraC-like ligand binding domain LTQ54_RS09070 PF00892 EamA-like transporter family LTQ54_RS09075 PF00270 DEAD/DEAH box helicase LTQ54_RS09075 PF00271 Helicase conserved C-terminal domain LTQ54_RS09075 PF16124 RecQ zinc-binding LTQ54_RS09075 PF09382 RQC domain LTQ54_RS09075 PF00570 HRDC domain LTQ54_RS09085 PF02592 Putative vitamin uptake transporter LTQ54_RS09090 PF02541 Ppx/GppA phosphatase family LTQ54_RS09095 PF00271 Helicase conserved C-terminal domain LTQ54_RS09095 PF00270 DEAD/DEAH box helicase LTQ54_RS09100 PF00085 Thioredoxin LTQ54_RS09105 PF07497 Rho termination factor, RNA-binding domain LTQ54_RS09105 PF07498 Rho termination factor, N-terminal domain LTQ54_RS09105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LTQ54_RS09115 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LTQ54_RS09120 PF00175 Oxidoreductase NAD-binding domain LTQ54_RS09120 PF00111 2Fe-2S iron-sulfur cluster binding domain LTQ54_RS09125 PF00175 Oxidoreductase NAD-binding domain LTQ54_RS09175 PF07219 HemY protein N-terminus LTQ54_RS09180 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LTQ54_RS09185 PF02602 Uroporphyrinogen-III synthase HemD LTQ54_RS09190 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LTQ54_RS09190 PF03900 Porphobilinogen deaminase, C-terminal domain LTQ54_RS09195 PF12633 Adenylate cyclase NT domain LTQ54_RS09195 PF01295 Adenylate cyclase, class-I LTQ54_RS09200 PF01491 Frataxin-like domain LTQ54_RS09210 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LTQ54_RS09210 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LTQ54_RS09215 PF01678 Diaminopimelate epimerase LTQ54_RS09225 PF02899 Phage integrase, N-terminal SAM-like domain LTQ54_RS09225 PF00589 Phage integrase family LTQ54_RS09230 PF13419 Haloacid dehalogenase-like hydrolase LTQ54_RS09235 PF08495 FIST N domain LTQ54_RS09235 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS09235 PF00563 EAL domain LTQ54_RS09235 PF10442 FIST C domain LTQ54_RS09240 PF08495 FIST N domain LTQ54_RS09240 PF10442 FIST C domain LTQ54_RS09240 PF00563 EAL domain LTQ54_RS09240 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS09245 PF03942 DTW domain LTQ54_RS09265 PF12146 Serine aminopeptidase, S33 LTQ54_RS09270 PF01810 LysE type translocator LTQ54_RS09275 PF08668 HDOD domain LTQ54_RS09275 PF00563 EAL domain LTQ54_RS09280 PF01022 Bacterial regulatory protein, arsR family LTQ54_RS09285 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LTQ54_RS09285 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LTQ54_RS09325 PF01914 MarC family integral membrane protein LTQ54_RS09340 PF00448 SRP54-type protein, GTPase domain LTQ54_RS09340 PF02881 SRP54-type protein, helical bundle domain LTQ54_RS09345 PF00005 ABC transporter LTQ54_RS09350 PF18075 FtsX extracellular domain LTQ54_RS09355 PF04545 Sigma-70, region 4 LTQ54_RS09355 PF04542 Sigma-70 region 2 LTQ54_RS09355 PF00140 Sigma-70 factor, region 1.2 LTQ54_RS09360 PF00581 Rhodanese-like domain LTQ54_RS09365 PF01694 Rhomboid family LTQ54_RS09365 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LTQ54_RS09370 PF03748 Flagellar basal body-associated protein FliL LTQ54_RS09375 PF04345 Chorismate lyase LTQ54_RS09380 PF01040 UbiA prenyltransferase family LTQ54_RS09385 PF01553 Acyltransferase LTQ54_RS09390 PF01219 Prokaryotic diacylglycerol kinase LTQ54_RS09395 PF01726 LexA DNA binding domain LTQ54_RS09395 PF00717 Peptidase S24-like LTQ54_RS09400 PF04072 Leucine carboxyl methyltransferase LTQ54_RS09405 PF01554 MatE LTQ54_RS09410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LTQ54_RS09410 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_RS09420 PF00440 Bacterial regulatory proteins, tetR family LTQ54_RS09430 PF05958 tRNA (Uracil-5-)-methyltransferase LTQ54_RS09435 PF00593 TonB dependent receptor LTQ54_RS09435 PF07715 TonB-dependent Receptor Plug Domain LTQ54_RS09445 PF01177 Asp/Glu/Hydantoin racemase LTQ54_RS09545 PF13091 PLD-like domain LTQ54_RS09555 PF01565 FAD binding domain LTQ54_RS09555 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LTQ54_RS09560 PF02237 Biotin protein ligase C terminal domain LTQ54_RS09560 PF08279 HTH domain LTQ54_RS09560 PF03099 Biotin/lipoate A/B protein ligase family LTQ54_RS09565 PF00485 Phosphoribulokinase / Uridine kinase family LTQ54_RS09590 PF03144 Elongation factor Tu domain 2 LTQ54_RS09590 PF03143 Elongation factor Tu C-terminal domain LTQ54_RS09590 PF00009 Elongation factor Tu GTP binding domain LTQ54_RS09595 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LTQ54_RS09600 PF02357 Transcription termination factor nusG LTQ54_RS09600 PF00467 KOW motif LTQ54_RS09605 PF03946 Ribosomal protein L11, N-terminal domain LTQ54_RS09605 PF00298 Ribosomal protein L11, RNA binding domain LTQ54_RS09610 PF00687 Ribosomal protein L1p/L10e family LTQ54_RS09615 PF00466 Ribosomal protein L10 LTQ54_RS09620 PF00542 Ribosomal protein L7/L12 C-terminal domain LTQ54_RS09620 PF16320 Ribosomal protein L7/L12 dimerisation domain LTQ54_RS09625 PF04563 RNA polymerase beta subunit LTQ54_RS09625 PF04565 RNA polymerase Rpb2, domain 3 LTQ54_RS09625 PF10385 RNA polymerase beta subunit external 1 domain LTQ54_RS09625 PF00562 RNA polymerase Rpb2, domain 6 LTQ54_RS09625 PF04560 RNA polymerase Rpb2, domain 7 LTQ54_RS09625 PF04561 RNA polymerase Rpb2, domain 2 LTQ54_RS09630 PF04997 RNA polymerase Rpb1, domain 1 LTQ54_RS09630 PF05000 RNA polymerase Rpb1, domain 4 LTQ54_RS09630 PF00623 RNA polymerase Rpb1, domain 2 LTQ54_RS09630 PF04983 RNA polymerase Rpb1, domain 3 LTQ54_RS09630 PF04998 RNA polymerase Rpb1, domain 5 LTQ54_RS09635 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LTQ54_RS09640 PF09297 NADH pyrophosphatase zinc ribbon domain LTQ54_RS09640 PF00293 NUDIX domain LTQ54_RS09645 PF01208 Uroporphyrinogen decarboxylase (URO-D) LTQ54_RS09660 PF04222 Protein of unknown function (DUF416) LTQ54_RS09665 PF00571 CBS domain LTQ54_RS09665 PF01595 Cyclin M transmembrane N-terminal domain LTQ54_RS09670 PF00216 Bacterial DNA-binding protein LTQ54_RS09680 PF02843 Phosphoribosylglycinamide synthetase, C domain LTQ54_RS09680 PF02844 Phosphoribosylglycinamide synthetase, N domain LTQ54_RS09680 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LTQ54_RS09685 PF01808 AICARFT/IMPCHase bienzyme LTQ54_RS09685 PF02142 MGS-like domain LTQ54_RS09690 PF13411 MerR HTH family regulatory protein LTQ54_RS09695 PF02954 Bacterial regulatory protein, Fis family LTQ54_RS09700 PF01207 Dihydrouridine synthase (Dus) LTQ54_RS09710 PF02785 Biotin carboxylase C-terminal domain LTQ54_RS09710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LTQ54_RS09710 PF00289 Biotin carboxylase, N-terminal domain LTQ54_RS09715 PF00364 Biotin-requiring enzyme LTQ54_RS09720 PF01220 Dehydroquinase class II LTQ54_RS09725 PF16177 Acetyl-coenzyme A synthetase N-terminus LTQ54_RS09725 PF00501 AMP-binding enzyme LTQ54_RS09725 PF13193 AMP-binding enzyme C-terminal domain LTQ54_RS09740 PF12832 MFS_1 like family LTQ54_RS09745 PF00672 HAMP domain LTQ54_RS09745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS09745 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS09745 PF01627 Hpt domain LTQ54_RS09745 PF00072 Response regulator receiver domain LTQ54_RS09750 PF10415 Fumarase C C-terminus LTQ54_RS09750 PF00206 Lyase LTQ54_RS09760 PF00474 Sodium:solute symporter family LTQ54_RS09770 PF03471 Transporter associated domain LTQ54_RS09770 PF00999 Sodium/hydrogen exchanger family LTQ54_RS09770 PF02080 TrkA-C domain LTQ54_RS09775 PF00072 Response regulator receiver domain LTQ54_RS09775 PF00196 Bacterial regulatory proteins, luxR family LTQ54_RS09780 PF02683 Cytochrome C biogenesis protein transmembrane region LTQ54_RS09780 PF11412 Disulphide bond corrector protein DsbC LTQ54_RS09785 PF02863 Arginine repressor, C-terminal domain LTQ54_RS09785 PF01316 Arginine repressor, DNA binding domain LTQ54_RS09790 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LTQ54_RS09790 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LTQ54_RS09795 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LTQ54_RS09795 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LTQ54_RS09800 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LTQ54_RS09800 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LTQ54_RS09805 PF00696 Amino acid kinase family LTQ54_RS09815 PF03606 C4-dicarboxylate anaerobic carrier LTQ54_RS09820 PF03605 Anaerobic c4-dicarboxylate membrane transporter LTQ54_RS09825 PF10415 Fumarase C C-terminus LTQ54_RS09825 PF00206 Lyase LTQ54_RS09830 PF04186 FxsA cytoplasmic membrane protein LTQ54_RS09835 PF00588 SpoU rRNA Methylase family LTQ54_RS09840 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LTQ54_RS09840 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LTQ54_RS09845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS09845 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS09845 PF00672 HAMP domain LTQ54_RS09845 PF16527 Two-component sensor protein CpxA, periplasmic domain LTQ54_RS09850 PF00072 Response regulator receiver domain LTQ54_RS09850 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS09860 PF01545 Cation efflux family LTQ54_RS09860 PF16916 Dimerisation domain of Zinc Transporter LTQ54_RS09865 PF00365 Phosphofructokinase LTQ54_RS09870 PF00121 Triosephosphate isomerase LTQ54_RS09880 PF05656 Protein of unknown function (DUF805) LTQ54_RS09895 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LTQ54_RS09900 PF06005 Cell division protein ZapB LTQ54_RS09905 PF03737 Aldolase/RraA LTQ54_RS09910 PF01040 UbiA prenyltransferase family LTQ54_RS09915 PF00004 ATPase family associated with various cellular activities (AAA) LTQ54_RS09915 PF07724 AAA domain (Cdc48 subfamily) LTQ54_RS09920 PF00227 Proteasome subunit LTQ54_RS09930 PF00356 Bacterial regulatory proteins, lacI family LTQ54_RS09935 PF00270 DEAD/DEAH box helicase LTQ54_RS09935 PF00271 Helicase conserved C-terminal domain LTQ54_RS09935 PF17764 3′ DNA-binding domain (3′BD) LTQ54_RS09935 PF18074 Primosomal protein N C-terminal domain LTQ54_RS09935 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LTQ54_RS09940 PF01197 Ribosomal protein L31 LTQ54_RS09945 PF00390 Malic enzyme, N-terminal domain LTQ54_RS09945 PF03949 Malic enzyme, NAD binding domain LTQ54_RS09950 PF01340 Met Apo-repressor, MetJ LTQ54_RS09955 PF01053 Cys/Met metabolism PLP-dependent enzyme LTQ54_RS09960 PF00696 Amino acid kinase family LTQ54_RS09960 PF00742 Homoserine dehydrogenase LTQ54_RS09960 PF03447 Homoserine dehydrogenase, NAD binding domain LTQ54_RS09965 PF02219 Methylenetetrahydrofolate reductase LTQ54_RS09975 PF00311 Phosphoenolpyruvate carboxylase LTQ54_RS09980 PF01546 Peptidase family M20/M25/M40 LTQ54_RS09980 PF07687 Peptidase dimerisation domain LTQ54_RS09985 PF01118 Semialdehyde dehydrogenase, NAD binding domain LTQ54_RS09985 PF02774 Semialdehyde dehydrogenase, dimerisation domain LTQ54_RS09990 PF00696 Amino acid kinase family LTQ54_RS09995 PF00764 Arginosuccinate synthase LTQ54_RS10000 PF00206 Lyase LTQ54_RS10000 PF14698 Argininosuccinate lyase C-terminal LTQ54_RS10000 PF00583 Acetyltransferase (GNAT) family LTQ54_RS10010 PF01042 Endoribonuclease L-PSP LTQ54_RS10015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LTQ54_RS10015 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_RS10020 PF00462 Glutaredoxin LTQ54_RS10020 PF08534 Redoxin LTQ54_RS10030 PF03466 LysR substrate binding domain LTQ54_RS10030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS10035 PF00912 Transglycosylase LTQ54_RS10035 PF00905 Penicillin binding protein transpeptidase domain LTQ54_RS10035 PF17092 Penicillin-binding protein OB-like domain LTQ54_RS10060 PF11741 AMIN domain LTQ54_RS10060 PF03958 Bacterial type II/III secretion system short domain LTQ54_RS10060 PF07660 Secretin and TonB N terminus short domain LTQ54_RS10060 PF00263 Bacterial type II and III secretion system protein LTQ54_RS10065 PF01202 Shikimate kinase LTQ54_RS10070 PF01761 3-dehydroquinate synthase LTQ54_RS10080 PF02086 D12 class N6 adenine-specific DNA methyltransferase LTQ54_RS10085 PF00834 Ribulose-phosphate 3 epimerase family LTQ54_RS10090 PF13419 Haloacid dehalogenase-like hydrolase LTQ54_RS10095 PF00579 tRNA synthetases class I (W and Y) LTQ54_RS10115 PF04231 Endonuclease I LTQ54_RS10120 PF00117 Glutamine amidotransferase class-I LTQ54_RS10125 PF00202 Aminotransferase class-III LTQ54_RS10130 PF04958 Arginine N-succinyltransferase beta subunit LTQ54_RS10135 PF00171 Aldehyde dehydrogenase family LTQ54_RS10145 PF00027 Cyclic nucleotide-binding domain LTQ54_RS10145 PF13545 Crp-like helix-turn-helix domain LTQ54_RS10150 PF00485 Phosphoribulokinase / Uridine kinase family LTQ54_RS10155 PF06794 Uncharacterised protein family (UPF0270) LTQ54_RS10160 PF00561 alpha/beta hydrolase fold LTQ54_RS10170 PF12848 ABC transporter LTQ54_RS10170 PF00005 ABC transporter LTQ54_RS10175 PF02525 Flavodoxin-like fold LTQ54_RS10180 PF00999 Sodium/hydrogen exchanger family LTQ54_RS10180 PF02254 TrkA-N domain LTQ54_RS10190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LTQ54_RS10195 PF01112 Asparaginase LTQ54_RS10200 PF04102 SlyX LTQ54_RS10210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LTQ54_RS10210 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LTQ54_RS10215 PF08348 YheO-like PAS domain LTQ54_RS10215 PF13309 HTH domain LTQ54_RS10220 PF02635 DsrE/DsrF-like family LTQ54_RS10225 PF02635 DsrE/DsrF-like family LTQ54_RS10235 PF00164 Ribosomal protein S12/S23 LTQ54_RS10240 PF00177 Ribosomal protein S7p/S5e LTQ54_RS10245 PF00009 Elongation factor Tu GTP binding domain LTQ54_RS10245 PF03144 Elongation factor Tu domain 2 LTQ54_RS10245 PF14492 Elongation Factor G, domain II LTQ54_RS10245 PF00679 Elongation factor G C-terminus LTQ54_RS10245 PF03764 Elongation factor G, domain IV LTQ54_RS10250 PF00009 Elongation factor Tu GTP binding domain LTQ54_RS10250 PF03144 Elongation factor Tu domain 2 LTQ54_RS10250 PF03143 Elongation factor Tu C-terminal domain LTQ54_RS10255 PF00338 Ribosomal protein S10p/S20e LTQ54_RS10260 PF00297 Ribosomal protein L3 LTQ54_RS10265 PF00573 Ribosomal protein L4/L1 family LTQ54_RS10270 PF00276 Ribosomal protein L23 LTQ54_RS10275 PF03947 Ribosomal Proteins L2, C-terminal domain LTQ54_RS10275 PF00181 Ribosomal Proteins L2, RNA binding domain LTQ54_RS10280 PF00203 Ribosomal protein S19 LTQ54_RS10285 PF00237 Ribosomal protein L22p/L17e LTQ54_RS10290 PF07650 KH domain LTQ54_RS10290 PF00189 Ribosomal protein S3, C-terminal domain LTQ54_RS10295 PF00252 Ribosomal protein L16p/L10e LTQ54_RS10300 PF00831 Ribosomal L29 protein LTQ54_RS10305 PF00366 Ribosomal protein S17 LTQ54_RS10310 PF00238 Ribosomal protein L14p/L23e LTQ54_RS10315 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LTQ54_RS10315 PF00467 KOW motif LTQ54_RS10320 PF00673 ribosomal L5P family C-terminus LTQ54_RS10320 PF00281 Ribosomal protein L5 LTQ54_RS10325 PF00253 Ribosomal protein S14p/S29e LTQ54_RS10330 PF00410 Ribosomal protein S8 LTQ54_RS10335 PF00347 Ribosomal protein L6 LTQ54_RS10340 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LTQ54_RS10345 PF03719 Ribosomal protein S5, C-terminal domain LTQ54_RS10345 PF00333 Ribosomal protein S5, N-terminal domain LTQ54_RS10350 PF00327 Ribosomal protein L30p/L7e LTQ54_RS10355 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LTQ54_RS10360 PF00344 SecY translocase LTQ54_RS10365 PF00444 Ribosomal protein L36 LTQ54_RS10370 PF00416 Ribosomal protein S13/S18 LTQ54_RS10375 PF00411 Ribosomal protein S11 LTQ54_RS10380 PF00163 Ribosomal protein S4/S9 N-terminal domain LTQ54_RS10380 PF01479 S4 domain LTQ54_RS10385 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LTQ54_RS10385 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LTQ54_RS10385 PF01000 RNA polymerase Rpb3/RpoA insert domain LTQ54_RS10390 PF01196 Ribosomal protein L17 LTQ54_RS10400 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LTQ54_RS10400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LTQ54_RS10405 PF08525 Opacity-associated protein A N-terminal motif LTQ54_RS10405 PF04225 Opacity-associated protein A LysM-like domain LTQ54_RS10415 PF13673 Acetyltransferase (GNAT) domain LTQ54_RS10460 PF00149 Calcineurin-like phosphoesterase LTQ54_RS10460 PF02872 5'-nucleotidase, C-terminal domain LTQ54_RS10465 PF01507 Phosphoadenosine phosphosulfate reductase family LTQ54_RS10470 PF00009 Elongation factor Tu GTP binding domain LTQ54_RS10475 PF03600 Citrate transporter LTQ54_RS10475 PF02080 TrkA-C domain LTQ54_RS10500 PF00005 ABC transporter LTQ54_RS10510 PF10795 Protein of unknown function (DUF2607) LTQ54_RS10515 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) LTQ54_RS10520 PF06526 Protein of unknown function (DUF1107) LTQ54_RS10525 PF01625 Peptide methionine sulfoxide reductase LTQ54_RS10530 PF07244 Surface antigen variable number repeat LTQ54_RS10530 PF01103 Surface antigen LTQ54_RS10530 PF17243 POTRA domain TamA domain 1 LTQ54_RS10535 PF04357 TamB, inner membrane protein subunit of TAM complex LTQ54_RS10540 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LTQ54_RS10550 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LTQ54_RS10555 PF01225 Mur ligase family, catalytic domain LTQ54_RS10555 PF08245 Mur ligase middle domain LTQ54_RS10555 PF02875 Mur ligase family, glutamate ligase domain LTQ54_RS10560 PF02441 Flavoprotein LTQ54_RS10570 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS10575 PF00005 ABC transporter LTQ54_RS10580 PF04751 Protein of unknown function (DUF615) LTQ54_RS10585 PF01523 Putative modulator of DNA gyrase LTQ54_RS10590 PF03448 MgtE intracellular N domain LTQ54_RS10590 PF01769 Divalent cation transporter LTQ54_RS10590 PF00571 CBS domain LTQ54_RS10595 PF00381 PTS HPr component phosphorylation site LTQ54_RS10600 PF03668 P-loop ATPase protein family LTQ54_RS10605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LTQ54_RS10610 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LTQ54_RS10615 PF04552 Sigma-54, DNA binding domain LTQ54_RS10615 PF04963 Sigma-54 factor, core binding domain LTQ54_RS10615 PF00309 Sigma-54 factor, Activator interacting domain (AID) LTQ54_RS10620 PF12399 Branched-chain amino acid ATP-binding cassette transporter LTQ54_RS10620 PF00005 ABC transporter LTQ54_RS10625 PF03968 OstA-like protein LTQ54_RS10640 PF00571 CBS domain LTQ54_RS10640 PF01380 SIS domain LTQ54_RS10645 PF01699 Sodium/calcium exchanger protein LTQ54_RS10650 PF00005 ABC transporter LTQ54_RS10655 PF02405 Permease MlaE LTQ54_RS10660 PF02470 MlaD protein LTQ54_RS10665 PF05494 MlaC protein LTQ54_RS10675 PF01722 BolA-like protein LTQ54_RS10680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LTQ54_RS10685 PF01553 Acyltransferase LTQ54_RS10690 PF01042 Endoribonuclease L-PSP LTQ54_RS10695 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LTQ54_RS10695 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LTQ54_RS10700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LTQ54_RS10700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LTQ54_RS10705 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LTQ54_RS10705 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LTQ54_RS10715 PF06877 Regulator of ribonuclease activity B LTQ54_RS10725 PF00583 Acetyltransferase (GNAT) family LTQ54_RS10735 PF05987 Bacterial protein of unknown function (DUF898) LTQ54_RS10740 PF01435 Peptidase family M48 LTQ54_RS10745 PF08264 Anticodon-binding domain of tRNA LTQ54_RS10745 PF00133 tRNA synthetases class I (I, L, M and V) LTQ54_RS10745 PF10458 Valyl tRNA synthetase tRNA binding arm LTQ54_RS10750 PF04364 DNA polymerase III chi subunit, HolC LTQ54_RS10755 PF00883 Cytosol aminopeptidase family, catalytic domain LTQ54_RS10755 PF02789 Cytosol aminopeptidase family, N-terminal domain LTQ54_RS10760 PF03739 Lipopolysaccharide export system permease LptF/LptG LTQ54_RS10765 PF03739 Lipopolysaccharide export system permease LptF/LptG LTQ54_RS10785 PF00072 Response regulator receiver domain LTQ54_RS10875 PF12729 Four helix bundle sensory module for signal transduction LTQ54_RS10875 PF00672 HAMP domain LTQ54_RS10875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS10915 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LTQ54_RS10915 PF01464 Transglycosylase SLT domain LTQ54_RS10920 PF04362 Bacterial Fe(2+) trafficking LTQ54_RS10925 PF14815 NUDIX domain LTQ54_RS10925 PF00633 Helix-hairpin-helix motif LTQ54_RS10925 PF00730 HhH-GPD superfamily base excision DNA repair protein LTQ54_RS10930 PF02390 Putative methyltransferase LTQ54_RS10935 PF04960 Glutaminase LTQ54_RS10940 PF04055 Radical SAM superfamily LTQ54_RS10940 PF06969 HemN C-terminal domain LTQ54_RS10945 PF01725 Ham1 family LTQ54_RS10955 PF02594 Uncharacterised ACR, YggU family COG1872 LTQ54_RS10960 PF02325 YGGT family LTQ54_RS10965 PF03807 NADP oxidoreductase coenzyme F420-dependent LTQ54_RS10965 PF14748 Pyrroline-5-carboxylate reductase dimerisation LTQ54_RS10970 PF01168 Alanine racemase, N-terminal domain LTQ54_RS10975 PF00437 Type II/IV secretion system protein LTQ54_RS10980 PF00437 Type II/IV secretion system protein LTQ54_RS10990 PF03652 Holliday junction resolvase LTQ54_RS10995 PF02622 Uncharacterized ACR, COG1678 LTQ54_RS11000 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LTQ54_RS11000 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LTQ54_RS11005 PF04452 RNA methyltransferase LTQ54_RS11015 PF04231 Endonuclease I LTQ54_RS11020 PF10263 SprT-like family LTQ54_RS11020 PF17283 SprT-like zinc ribbon domain LTQ54_RS11030 PF02773 S-adenosylmethionine synthetase, C-terminal domain LTQ54_RS11030 PF02772 S-adenosylmethionine synthetase, central domain LTQ54_RS11030 PF00438 S-adenosylmethionine synthetase, N-terminal domain LTQ54_RS11035 PF00456 Transketolase, thiamine diphosphate binding domain LTQ54_RS11035 PF02779 Transketolase, pyrimidine binding domain LTQ54_RS11035 PF02780 Transketolase, C-terminal domain LTQ54_RS11040 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LTQ54_RS11040 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LTQ54_RS11045 PF00162 Phosphoglycerate kinase LTQ54_RS11050 PF01116 Fructose-bisphosphate aldolase class-II LTQ54_RS11055 PF00924 Mechanosensitive ion channel LTQ54_RS11055 PF05552 Conserved TM helix LTQ54_RS11060 PF01810 LysE type translocator LTQ54_RS11065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS11065 PF03466 LysR substrate binding domain LTQ54_RS11075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LTQ54_RS11075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LTQ54_RS11075 PF01842 ACT domain LTQ54_RS11080 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LTQ54_RS11085 PF01812 5-formyltetrahydrofolate cyclo-ligase family LTQ54_RS11095 PF05164 Cell division protein ZapA LTQ54_RS11100 PF03695 Uncharacterised protein family (UPF0149) LTQ54_RS11105 PF01494 FAD binding domain LTQ54_RS11110 PF01494 FAD binding domain LTQ54_RS11130 PF03937 Flavinator of succinate dehydrogenase LTQ54_RS11135 PF00890 FAD binding domain LTQ54_RS11135 PF02910 Fumarate reductase flavoprotein C-term LTQ54_RS11140 PF04542 Sigma-70 region 2 LTQ54_RS11140 PF08281 Sigma-70, region 4 LTQ54_RS11145 PF03873 Anti sigma-E protein RseA, C-terminal domain LTQ54_RS11145 PF03872 Anti sigma-E protein RseA, N-terminal domain LTQ54_RS11150 PF17188 MucB/RseB C-terminal domain LTQ54_RS11150 PF03888 MucB/RseB N-terminal domain LTQ54_RS11160 PF00009 Elongation factor Tu GTP binding domain LTQ54_RS11160 PF03144 Elongation factor Tu domain 2 LTQ54_RS11160 PF06421 GTP-binding protein LepA C-terminus LTQ54_RS11160 PF00679 Elongation factor G C-terminus LTQ54_RS11165 PF10502 Signal peptidase, peptidase S26 LTQ54_RS11170 PF14622 Ribonuclease-III-like LTQ54_RS11170 PF00035 Double-stranded RNA binding motif LTQ54_RS11175 PF07650 KH domain LTQ54_RS11175 PF01926 50S ribosome-binding GTPase LTQ54_RS11180 PF02565 Recombination protein O C terminal LTQ54_RS11180 PF11967 Recombination protein O N terminal LTQ54_RS11185 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LTQ54_RS11190 PF01648 4'-phosphopantetheinyl transferase superfamily LTQ54_RS11195 PF00672 HAMP domain LTQ54_RS11195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS11195 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS11195 PF01627 Hpt domain LTQ54_RS11195 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LTQ54_RS11195 PF00072 Response regulator receiver domain LTQ54_RS11200 PF05958 tRNA (Uracil-5-)-methyltransferase LTQ54_RS11200 PF01938 TRAM domain LTQ54_RS11205 PF02824 TGS domain LTQ54_RS11205 PF04607 Region found in RelA / SpoT proteins LTQ54_RS11205 PF13291 ACT domain LTQ54_RS11210 PF03819 MazG nucleotide pyrophosphohydrolase domain LTQ54_RS11215 PF06418 CTP synthase N-terminus LTQ54_RS11215 PF00117 Glutamine amidotransferase class-I LTQ54_RS11220 PF00113 Enolase, C-terminal TIM barrel domain LTQ54_RS11220 PF03952 Enolase, N-terminal domain LTQ54_RS11225 PF04977 Septum formation initiator LTQ54_RS11230 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LTQ54_RS11235 PF02542 YgbB family LTQ54_RS11240 PF01142 tRNA pseudouridine synthase D (TruD) LTQ54_RS11245 PF01975 Survival protein SurE LTQ54_RS11255 PF01476 LysM domain LTQ54_RS11255 PF01551 Peptidase family M23 LTQ54_RS11260 PF00140 Sigma-70 factor, region 1.2 LTQ54_RS11260 PF04542 Sigma-70 region 2 LTQ54_RS11260 PF04539 Sigma-70 region 3 LTQ54_RS11260 PF04545 Sigma-70, region 4 LTQ54_RS11265 PF05190 MutS family domain IV LTQ54_RS11265 PF00488 MutS domain V LTQ54_RS11265 PF05192 MutS domain III LTQ54_RS11265 PF05188 MutS domain II LTQ54_RS11265 PF01624 MutS domain I LTQ54_RS11270 PF02464 Competence-damaged protein LTQ54_RS11275 PF00154 recA bacterial DNA recombination protein LTQ54_RS11280 PF02272 DHHA1 domain LTQ54_RS11280 PF01411 tRNA synthetases class II (A) LTQ54_RS11280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LTQ54_RS11285 PF00696 Amino acid kinase family LTQ54_RS11285 PF01842 ACT domain LTQ54_RS11285 PF13840 ACT domain LTQ54_RS11290 PF02599 Global regulator protein family LTQ54_RS11345 PF04277 Oxaloacetate decarboxylase, gamma chain LTQ54_RS11350 PF00682 HMGL-like LTQ54_RS11350 PF00364 Biotin-requiring enzyme LTQ54_RS11350 PF02436 Conserved carboxylase domain LTQ54_RS11355 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit LTQ54_RS11360 PF00107 Zinc-binding dehydrogenase LTQ54_RS11360 PF08240 Alcohol dehydrogenase GroES-like domain LTQ54_RS11365 PF09335 SNARE associated Golgi protein LTQ54_RS11370 PF05193 Peptidase M16 inactive domain LTQ54_RS11370 PF00675 Insulinase (Peptidase family M16) LTQ54_RS11375 PF04262 Glutamate-cysteine ligase LTQ54_RS11385 PF02664 S-Ribosylhomocysteinase (LuxS) LTQ54_RS11390 PF00571 CBS domain LTQ54_RS11390 PF03471 Transporter associated domain LTQ54_RS11390 PF01595 Cyclin M transmembrane N-terminal domain LTQ54_RS11395 PF01578 Cytochrome C assembly protein LTQ54_RS11400 PF00448 SRP54-type protein, GTPase domain LTQ54_RS11400 PF02881 SRP54-type protein, helical bundle domain LTQ54_RS11400 PF02978 Signal peptide binding domain LTQ54_RS11405 PF00886 Ribosomal protein S16 LTQ54_RS11410 PF01782 RimM N-terminal domain LTQ54_RS11410 PF05239 PRC-barrel domain LTQ54_RS11415 PF01746 tRNA (Guanine-1)-methyltransferase LTQ54_RS11420 PF01245 Ribosomal protein L19 LTQ54_RS11425 PF03884 DNA gyrase inhibitor YacG LTQ54_RS11430 PF07072 Cell division protein LTQ54_RS11435 PF01121 Dephospho-CoA kinase LTQ54_RS11440 PF06750 Bacterial Peptidase A24 N-terminal domain LTQ54_RS11440 PF01478 Type IV leader peptidase family LTQ54_RS11445 PF00482 Type II secretion system (T2SS), protein F LTQ54_RS11450 PF00437 Type II/IV secretion system protein LTQ54_RS11450 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LTQ54_RS11455 PF07963 Prokaryotic N-terminal methylation motif LTQ54_RS11455 PF00114 Pilin (bacterial filament) LTQ54_RS11460 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LTQ54_RS11460 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LTQ54_RS11465 PF01510 N-acetylmuramoyl-L-alanine amidase LTQ54_RS11470 PF07729 FCD domain LTQ54_RS11470 PF00392 Bacterial regulatory proteins, gntR family LTQ54_RS11475 PF00456 Transketolase, thiamine diphosphate binding domain LTQ54_RS11475 PF17831 Pyruvate dehydrogenase E1 component middle domain LTQ54_RS11480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LTQ54_RS11480 PF00364 Biotin-requiring enzyme LTQ54_RS11480 PF02817 e3 binding domain LTQ54_RS11485 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_RS11485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LTQ54_RS11490 PF00440 Bacterial regulatory proteins, tetR family LTQ54_RS11495 PF00156 Phosphoribosyl transferase domain LTQ54_RS11500 PF00484 Carbonic anhydrase LTQ54_RS11505 PF00916 Sulfate permease family LTQ54_RS11505 PF01740 STAS domain LTQ54_RS11510 PF00005 ABC transporter LTQ54_RS11515 PF01061 ABC-2 type transporter LTQ54_RS11520 PF02569 Pantoate-beta-alanine ligase LTQ54_RS11525 PF02548 Ketopantoate hydroxymethyltransferase LTQ54_RS11530 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LTQ54_RS11535 PF01743 Poly A polymerase head domain LTQ54_RS11535 PF12626 Polymerase A arginine-rich C-terminus LTQ54_RS11535 PF12627 Probable RNA and SrmB- binding site of polymerase A LTQ54_RS11540 PF00749 tRNA synthetases class I (E and Q), catalytic domain LTQ54_RS11545 PF01258 Prokaryotic dksA/traR C4-type zinc finger LTQ54_RS11550 PF03749 Sugar fermentation stimulation protein RE domain LTQ54_RS11550 PF17746 SfsA N-terminal OB domain LTQ54_RS11555 PF00270 DEAD/DEAH box helicase LTQ54_RS11555 PF04408 Helicase associated domain (HA2) LTQ54_RS11555 PF00271 Helicase conserved C-terminal domain LTQ54_RS11555 PF08482 ATP-dependent helicase C-terminal LTQ54_RS11560 PF00912 Transglycosylase LTQ54_RS11560 PF00905 Penicillin binding protein transpeptidase domain LTQ54_RS11560 PF14814 Bifunctional transglycosylase second domain LTQ54_RS11565 PF01734 Patatin-like phospholipase LTQ54_RS11570 PF00330 Aconitase family (aconitate hydratase) LTQ54_RS11570 PF06434 Aconitate hydratase 2 N-terminus LTQ54_RS11570 PF11791 Aconitate B N-terminal domain LTQ54_RS11575 PF06062 Uncharacterised protein family (UPF0231) LTQ54_RS11580 PF00543 Nitrogen regulatory protein P-II LTQ54_RS11585 PF00909 Ammonium Transporter Family LTQ54_RS11590 PF13416 Bacterial extracellular solute-binding protein LTQ54_RS11600 PF08402 TOBE domain LTQ54_RS11600 PF00005 ABC transporter LTQ54_RS11605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LTQ54_RS11605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LTQ54_RS11605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LTQ54_RS11605 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LTQ54_RS11610 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LTQ54_RS11610 PF06165 Glycosyltransferase family 36 LTQ54_RS11615 PF00728 Glycosyl hydrolase family 20, catalytic domain LTQ54_RS11615 PF02838 Glycosyl hydrolase family 20, domain 2 LTQ54_RS11620 PF01869 BadF/BadG/BcrA/BcrD ATPase family LTQ54_RS11630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_RS11630 PF00005 ABC transporter LTQ54_RS11635 PF00005 ABC transporter LTQ54_RS11635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_RS11640 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS11640 PF12911 N-terminal TM domain of oligopeptide transport permease C LTQ54_RS11645 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS11650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_RS11655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS11655 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS11655 PF01627 Hpt domain LTQ54_RS11655 PF00072 Response regulator receiver domain LTQ54_RS11655 PF17149 Periplasmic sensor domain found in signal transduction proteins LTQ54_RS11655 PF00672 HAMP domain LTQ54_RS11660 PF05175 Methyltransferase small domain LTQ54_RS11660 PF08468 Methyltransferase small domain N-terminal LTQ54_RS11665 PF01594 AI-2E family transporter LTQ54_RS11670 PF00202 Aminotransferase class-III LTQ54_RS11675 PF01521 Iron-sulphur cluster biosynthesis LTQ54_RS11685 PF00873 AcrB/AcrD/AcrF family LTQ54_RS11690 PF01476 LysM domain LTQ54_RS11690 PF08525 Opacity-associated protein A N-terminal motif LTQ54_RS11690 PF01551 Peptidase family M23 LTQ54_RS11695 PF00579 tRNA synthetases class I (W and Y) LTQ54_RS11700 PF00571 CBS domain LTQ54_RS11700 PF01769 Divalent cation transporter LTQ54_RS11700 PF03448 MgtE intracellular N domain LTQ54_RS11705 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LTQ54_RS11710 PF13609 Gram-negative porin LTQ54_RS11715 PF01272 Transcription elongation factor, GreA/GreB, C-term LTQ54_RS11715 PF03449 Transcription elongation factor, N-terminal LTQ54_RS11720 PF01985 CRS1 / YhbY (CRM) domain LTQ54_RS11725 PF01728 FtsJ-like methyltransferase LTQ54_RS11730 PF00004 ATPase family associated with various cellular activities (AAA) LTQ54_RS11730 PF17862 AAA+ lid domain LTQ54_RS11730 PF06480 FtsH Extracellular LTQ54_RS11730 PF01434 Peptidase family M41 LTQ54_RS11735 PF00809 Pterin binding enzyme LTQ54_RS11740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LTQ54_RS11740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LTQ54_RS11740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LTQ54_RS11740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LTQ54_RS11745 PF03840 Preprotein translocase SecG subunit LTQ54_RS11760 PF17384 RimP C-terminal SH3 domain LTQ54_RS11760 PF02576 RimP N-terminal domain LTQ54_RS11765 PF08529 NusA N-terminal domain LTQ54_RS11765 PF00575 S1 RNA binding domain LTQ54_RS11765 PF13184 NusA-like KH domain LTQ54_RS11770 PF00009 Elongation factor Tu GTP binding domain LTQ54_RS11770 PF11987 Translation-initiation factor 2 LTQ54_RS11770 PF08364 Bacterial translation initiation factor IF-2 associated region LTQ54_RS11770 PF04760 Translation initiation factor IF-2, N-terminal region LTQ54_RS11775 PF02033 Ribosome-binding factor A LTQ54_RS11780 PF09157 Pseudouridine synthase II TruB, C-terminal LTQ54_RS11780 PF16198 tRNA pseudouridylate synthase B C-terminal domain LTQ54_RS11780 PF01509 TruB family pseudouridylate synthase (N terminal domain) LTQ54_RS11785 PF00312 Ribosomal protein S15 LTQ54_RS11790 PF00013 KH domain LTQ54_RS11790 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LTQ54_RS11790 PF01138 3' exoribonuclease family, domain 1 LTQ54_RS11790 PF03725 3' exoribonuclease family, domain 2 LTQ54_RS11790 PF00575 S1 RNA binding domain LTQ54_RS11795 PF07719 Tetratricopeptide repeat LTQ54_RS11795 PF13181 Tetratricopeptide repeat LTQ54_RS11805 PF01554 MatE LTQ54_RS11810 PF01136 Peptidase family U32 LTQ54_RS11815 PF01136 Peptidase family U32 LTQ54_RS11820 PF00563 EAL domain LTQ54_RS11820 PF03707 Bacterial signalling protein N terminal repeat LTQ54_RS11820 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS11825 PF02036 SCP-2 sterol transfer family LTQ54_RS11830 PF13508 Acetyltransferase (GNAT) domain LTQ54_RS11840 PF00583 Acetyltransferase (GNAT) family LTQ54_RS11845 PF16658 Class II release factor RF3, C-terminal domain LTQ54_RS11845 PF03144 Elongation factor Tu domain 2 LTQ54_RS11845 PF00009 Elongation factor Tu GTP binding domain LTQ54_RS11855 PF01026 TatD related DNase LTQ54_RS11860 PF01773 Na+ dependent nucleoside transporter N-terminus LTQ54_RS11860 PF07662 Na+ dependent nucleoside transporter C-terminus LTQ54_RS11860 PF07670 Nucleoside recognition LTQ54_RS11865 PF01791 DeoC/LacD family aldolase LTQ54_RS11870 PF00591 Glycosyl transferase family, a/b domain LTQ54_RS11870 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LTQ54_RS11870 PF02885 Glycosyl transferase family, helical bundle domain LTQ54_RS11875 PF01676 Metalloenzyme superfamily LTQ54_RS11880 PF01048 Phosphorylase superfamily LTQ54_RS11890 PF18429 Domain of unknown function (DUF5609) LTQ54_RS11900 PF18073 Rubredoxin metal binding domain LTQ54_RS11905 PF00009 Elongation factor Tu GTP binding domain LTQ54_RS11905 PF03144 Elongation factor Tu domain 2 LTQ54_RS11905 PF14492 Elongation Factor G, domain II LTQ54_RS11905 PF00679 Elongation factor G C-terminus LTQ54_RS11905 PF03764 Elongation factor G, domain IV LTQ54_RS11935 PF09905 DNA-binding protein VF530 LTQ54_RS11940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS11940 PF03466 LysR substrate binding domain LTQ54_RS11950 PF03466 LysR substrate binding domain LTQ54_RS11950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS11970 PF00501 AMP-binding enzyme LTQ54_RS11975 PF02311 AraC-like ligand binding domain LTQ54_RS11975 PF12833 Helix-turn-helix domain LTQ54_RS12000 PF00263 Bacterial type II and III secretion system protein LTQ54_RS12000 PF04972 BON domain LTQ54_RS12000 PF13629 Pilus formation protein N terminal region LTQ54_RS12030 PF00437 Type II/IV secretion system protein LTQ54_RS12050 PF02417 Chromate transporter LTQ54_RS12055 PF03466 LysR substrate binding domain LTQ54_RS12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS12065 PF00356 Bacterial regulatory proteins, lacI family LTQ54_RS12070 PF16874 Glycosyl hydrolase family 36 C-terminal domain LTQ54_RS12070 PF16875 Glycosyl hydrolase family 36 N-terminal domain LTQ54_RS12075 PF00474 Sodium:solute symporter family LTQ54_RS12080 PF01554 MatE LTQ54_RS12085 PF00005 ABC transporter LTQ54_RS12085 PF17912 MalK OB fold domain LTQ54_RS12090 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS12095 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS12105 PF00703 Glycosyl hydrolases family 2 LTQ54_RS12105 PF02837 Glycosyl hydrolases family 2, sugar binding domain LTQ54_RS12105 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LTQ54_RS12105 PF02929 Beta galactosidase small chain LTQ54_RS12105 PF16353 Domain of unknown function(DUF4981) LTQ54_RS12110 PF01204 Trehalase LTQ54_RS12120 PF13520 Amino acid permease LTQ54_RS12125 PF13520 Amino acid permease LTQ54_RS12130 PF04074 YhcH/YjgK/YiaL LTQ54_RS12135 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LTQ54_RS12135 PF02929 Beta galactosidase small chain LTQ54_RS12135 PF16353 Domain of unknown function(DUF4981) LTQ54_RS12135 PF00703 Glycosyl hydrolases family 2 LTQ54_RS12135 PF02837 Glycosyl hydrolases family 2, sugar binding domain LTQ54_RS12140 PF00356 Bacterial regulatory proteins, lacI family LTQ54_RS12145 PF16363 GDP-mannose 4,6 dehydratase LTQ54_RS12150 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LTQ54_RS12150 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LTQ54_RS12155 PF08544 GHMP kinases C terminal LTQ54_RS12155 PF00288 GHMP kinases N terminal domain LTQ54_RS12155 PF10509 Galactokinase galactose-binding signature LTQ54_RS12160 PF01263 Aldose 1-epimerase LTQ54_RS12165 PF00356 Bacterial regulatory proteins, lacI family LTQ54_RS12170 PF01588 Putative tRNA binding domain LTQ54_RS12185 PF00962 Adenosine/AMP deaminase LTQ54_RS12205 PF07687 Peptidase dimerisation domain LTQ54_RS12205 PF01546 Peptidase family M20/M25/M40 LTQ54_RS12210 PF00860 Permease family LTQ54_RS12215 PF00156 Phosphoribosyl transferase domain LTQ54_RS12220 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) LTQ54_RS12225 PF07417 Sigma factor-binding transcriptional regulator Crl LTQ54_RS12230 PF01472 PUA domain LTQ54_RS12230 PF00696 Amino acid kinase family LTQ54_RS12235 PF00171 Aldehyde dehydrogenase family LTQ54_RS12240 PF03477 ATP cone domain LTQ54_RS12245 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LTQ54_RS12245 PF01872 RibD C-terminal domain LTQ54_RS12250 PF00677 Lumazine binding domain LTQ54_RS12255 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LTQ54_RS12255 PF00925 GTP cyclohydrolase II LTQ54_RS12260 PF00885 6,7-dimethyl-8-ribityllumazine synthase LTQ54_RS12265 PF01029 NusB family LTQ54_RS12270 PF02769 AIR synthase related protein, C-terminal domain LTQ54_RS12270 PF00586 AIR synthase related protein, N-terminal domain LTQ54_RS12275 PF04608 Phosphatidylglycerophosphatase A LTQ54_RS12285 PF02779 Transketolase, pyrimidine binding domain LTQ54_RS12285 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LTQ54_RS12285 PF02780 Transketolase, C-terminal domain LTQ54_RS12290 PF00348 Polyprenyl synthetase LTQ54_RS12295 PF02609 Exonuclease VII small subunit LTQ54_RS12300 PF01618 MotA/TolQ/ExbB proton channel family LTQ54_RS12305 PF13677 Membrane MotB of proton-channel complex MotA/MotB LTQ54_RS12305 PF00691 OmpA family LTQ54_RS12310 PF02926 THUMP domain LTQ54_RS12310 PF02568 Thiamine biosynthesis protein (ThiI) LTQ54_RS12315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS12315 PF03466 LysR substrate binding domain LTQ54_RS12330 PF18125 RlmM ferredoxin-like domain LTQ54_RS12330 PF01728 FtsJ-like methyltransferase LTQ54_RS12335 PF01223 DNA/RNA non-specific endonuclease LTQ54_RS12340 PF01367 5'-3' exonuclease, C-terminal SAM fold LTQ54_RS12340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LTQ54_RS12345 PF11892 Domain of unknown function (DUF3412) LTQ54_RS12345 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LTQ54_RS12345 PF03641 Possible lysine decarboxylase LTQ54_RS12350 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS12360 PF14489 QueF-like protein LTQ54_RS12360 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LTQ54_RS12365 PF07348 Syd protein (SUKH-2) LTQ54_RS12370 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) LTQ54_RS12375 PF02264 LamB porin LTQ54_RS12380 PF03180 NLPA lipoprotein LTQ54_RS12385 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS12390 PF00005 ABC transporter LTQ54_RS12390 PF09383 NIL domain LTQ54_RS12405 PF00356 Bacterial regulatory proteins, lacI family LTQ54_RS12410 PF00367 phosphotransferase system, EIIB LTQ54_RS12410 PF02378 Phosphotransferase system, EIIC LTQ54_RS12415 PF00128 Alpha amylase, catalytic domain LTQ54_RS12415 PF16657 Maltogenic Amylase, C-terminal domain LTQ54_RS12435 PF00464 Serine hydroxymethyltransferase LTQ54_RS12450 PF06786 Uncharacterised protein family (UPF0253) LTQ54_RS12460 PF03129 Anticodon binding domain LTQ54_RS12460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LTQ54_RS12460 PF04073 Aminoacyl-tRNA editing domain LTQ54_RS12465 PF01980 tRNA-methyltransferase O LTQ54_RS12465 PF18389 TrmO C-terminal domain LTQ54_RS12470 PF01197 Ribosomal protein L31 LTQ54_RS12475 PF00444 Ribosomal protein L36 LTQ54_RS12480 PF03806 AbgT putative transporter family LTQ54_RS12490 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LTQ54_RS12515 PF04287 tRNA pseudouridine synthase C LTQ54_RS12520 PF00849 RNA pseudouridylate synthase LTQ54_RS12525 PF11944 Protein of unknown function (DUF3461) LTQ54_RS12530 PF01909 Nucleotidyltransferase domain LTQ54_RS12530 PF08335 GlnD PII-uridylyltransferase LTQ54_RS12530 PF01842 ACT domain LTQ54_RS12530 PF01966 HD domain LTQ54_RS12535 PF00557 Metallopeptidase family M24 LTQ54_RS12540 PF00318 Ribosomal protein S2 LTQ54_RS12545 PF00889 Elongation factor TS LTQ54_RS12550 PF00696 Amino acid kinase family LTQ54_RS12555 PF01765 Ribosome recycling factor LTQ54_RS12560 PF01255 Putative undecaprenyl diphosphate synthase LTQ54_RS12570 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LTQ54_RS12570 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LTQ54_RS12570 PF13288 DXP reductoisomerase C-terminal domain LTQ54_RS12575 PF17820 PDZ domain LTQ54_RS12575 PF02163 Peptidase family M50 LTQ54_RS12580 PF01103 Surface antigen LTQ54_RS12580 PF07244 Surface antigen variable number repeat LTQ54_RS12585 PF03938 Outer membrane protein (OmpH-like) LTQ54_RS12590 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_RS12590 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LTQ54_RS12595 PF07977 FabA-like domain LTQ54_RS12600 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LTQ54_RS12600 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_RS12605 PF02684 Lipid-A-disaccharide synthetase LTQ54_RS12610 PF01351 Ribonuclease HII LTQ54_RS12615 PF14579 Helix-hairpin-helix motif LTQ54_RS12615 PF01336 OB-fold nucleic acid binding domain LTQ54_RS12615 PF02811 PHP domain LTQ54_RS12615 PF07733 Bacterial DNA polymerase III alpha NTPase domain LTQ54_RS12615 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LTQ54_RS12620 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LTQ54_RS12625 PF01171 PP-loop family LTQ54_RS12625 PF09179 TilS substrate binding domain LTQ54_RS12625 PF11734 TilS substrate C-terminal domain LTQ54_RS12630 PF00034 Cytochrome c LTQ54_RS12635 PF00543 Nitrogen regulatory protein P-II LTQ54_RS12640 PF03372 Endonuclease/Exonuclease/phosphatase family LTQ54_RS12650 PF01476 LysM domain LTQ54_RS12650 PF01464 Transglycosylase SLT domain LTQ54_RS12655 PF16123 Hydroxyacylglutathione hydrolase C-terminus LTQ54_RS12655 PF00753 Metallo-beta-lactamase superfamily LTQ54_RS12660 PF08241 Methyltransferase domain LTQ54_RS12665 PF00075 RNase H LTQ54_RS12670 PF00929 Exonuclease LTQ54_RS12680 PF02770 Acyl-CoA dehydrogenase, middle domain LTQ54_RS12680 PF09317 Domain of unknown function (DUF1974) LTQ54_RS12680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LTQ54_RS12680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LTQ54_RS12685 PF13580 SIS domain LTQ54_RS12690 PF13230 Glutamine amidotransferases class-II LTQ54_RS12695 PF00551 Formyl transferase LTQ54_RS12700 PF00586 AIR synthase related protein, N-terminal domain LTQ54_RS12700 PF02769 AIR synthase related protein, C-terminal domain LTQ54_RS12710 PF00860 Permease family LTQ54_RS12725 PF03358 NADPH-dependent FMN reductase LTQ54_RS12730 PF03960 ArsC family LTQ54_RS12735 PF13181 Tetratricopeptide repeat LTQ54_RS12735 PF01435 Peptidase family M48 LTQ54_RS12745 PF01594 AI-2E family transporter LTQ54_RS12750 PF00578 AhpC/TSA family LTQ54_RS12755 PF01842 ACT domain LTQ54_RS12760 PF00701 Dihydrodipicolinate synthetase family LTQ54_RS12765 PF06804 NlpB/DapX lipoprotein LTQ54_RS12780 PF01546 Peptidase family M20/M25/M40 LTQ54_RS12780 PF07687 Peptidase dimerisation domain LTQ54_RS12785 PF03960 ArsC family LTQ54_RS12805 PF11143 Protein of unknown function (DUF2919) LTQ54_RS12810 PF04261 Dyp-type peroxidase family LTQ54_RS12815 PF00669 Bacterial flagellin N-terminal helical region LTQ54_RS12815 PF00700 Bacterial flagellin C-terminal helical region LTQ54_RS12815 PF07196 Flagellin hook IN motif LTQ54_RS12820 PF07196 Flagellin hook IN motif LTQ54_RS12820 PF00700 Bacterial flagellin C-terminal helical region LTQ54_RS12820 PF00669 Bacterial flagellin N-terminal helical region LTQ54_RS12825 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LTQ54_RS12830 PF05524 PEP-utilising enzyme, N-terminal LTQ54_RS12830 PF00391 PEP-utilising enzyme, mobile domain LTQ54_RS12830 PF02896 PEP-utilising enzyme, TIM barrel domain LTQ54_RS12835 PF00381 PTS HPr component phosphorylation site LTQ54_RS12840 PF00291 Pyridoxal-phosphate dependent enzyme LTQ54_RS12850 PF04354 ZipA, C-terminal FtsZ-binding domain LTQ54_RS12855 PF12826 Helix-hairpin-helix motif LTQ54_RS12855 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LTQ54_RS12855 PF03120 NAD-dependent DNA ligase OB-fold domain LTQ54_RS12855 PF01653 NAD-dependent DNA ligase adenylation domain LTQ54_RS12855 PF00533 BRCA1 C Terminus (BRCT) domain LTQ54_RS12865 PF03573 outer membrane porin, OprD family LTQ54_RS12880 PF13411 MerR HTH family regulatory protein LTQ54_RS12890 PF16200 C-terminal region of band_7 LTQ54_RS12890 PF01145 SPFH domain / Band 7 family LTQ54_RS12895 PF00085 Thioredoxin LTQ54_RS12900 PF00106 short chain dehydrogenase LTQ54_RS12905 PF08338 Domain of unknown function (DUF1731) LTQ54_RS12905 PF01370 NAD dependent epimerase/dehydratase family LTQ54_RS12910 PF07556 Protein of unknown function (DUF1538) LTQ54_RS12915 PF07556 Protein of unknown function (DUF1538) LTQ54_RS12930 PF12850 Calcineurin-like phosphoesterase superfamily domain LTQ54_RS12940 PF17323 Trans-membrane regulatory protein ToxS LTQ54_RS12945 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS12950 PF00183 Hsp90 protein LTQ54_RS12950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS12955 PF05191 Adenylate kinase, active site lid LTQ54_RS12960 PF00762 Ferrochelatase LTQ54_RS12965 PF00854 POT family LTQ54_RS12970 PF02357 Transcription termination factor nusG LTQ54_RS12975 PF00733 Asparagine synthase LTQ54_RS12975 PF13537 Glutamine amidotransferase domain LTQ54_RS12980 PF00999 Sodium/hydrogen exchanger family LTQ54_RS12980 PF02254 TrkA-N domain LTQ54_RS12985 PF01047 MarR family LTQ54_RS12985 PF00480 ROK family LTQ54_RS12990 PF01979 Amidohydrolase family LTQ54_RS12995 PF02378 Phosphotransferase system, EIIC LTQ54_RS12995 PF00367 phosphotransferase system, EIIB LTQ54_RS13000 PF00749 tRNA synthetases class I (E and Q), catalytic domain LTQ54_RS13000 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LTQ54_RS13005 PF01475 Ferric uptake regulator family LTQ54_RS13015 PF00258 Flavodoxin LTQ54_RS13025 PF12697 Alpha/beta hydrolase family LTQ54_RS13030 PF03925 SeqA protein C-terminal domain LTQ54_RS13030 PF17206 SeqA protein N-terminal domain LTQ54_RS13035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LTQ54_RS13035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LTQ54_RS13035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LTQ54_RS13035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LTQ54_RS13045 PF01784 NIF3 (NGG1p interacting factor 3) LTQ54_RS13050 PF00285 Citrate synthase, C-terminal domain LTQ54_RS13055 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LTQ54_RS13060 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LTQ54_RS13065 PF00890 FAD binding domain LTQ54_RS13065 PF02910 Fumarate reductase flavoprotein C-term LTQ54_RS13070 PF13085 2Fe-2S iron-sulfur cluster binding domain LTQ54_RS13075 PF16078 2-oxoglutarate dehydrogenase N-terminus LTQ54_RS13075 PF00676 Dehydrogenase E1 component LTQ54_RS13075 PF16870 2-oxoglutarate dehydrogenase C-terminal LTQ54_RS13075 PF02779 Transketolase, pyrimidine binding domain LTQ54_RS13080 PF02817 e3 binding domain LTQ54_RS13080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LTQ54_RS13080 PF00364 Biotin-requiring enzyme LTQ54_RS13085 PF08442 ATP-grasp domain LTQ54_RS13085 PF00549 CoA-ligase LTQ54_RS13090 PF02629 CoA binding domain LTQ54_RS13090 PF00549 CoA-ligase LTQ54_RS13095 PF00950 ABC 3 transport family LTQ54_RS13100 PF00005 ABC transporter LTQ54_RS13105 PF01297 Zinc-uptake complex component A periplasmic LTQ54_RS13110 PF12833 Helix-turn-helix domain LTQ54_RS13120 PF04023 FeoA domain LTQ54_RS13125 PF02421 Ferrous iron transport protein B LTQ54_RS13125 PF07670 Nucleoside recognition LTQ54_RS13125 PF07664 Ferrous iron transport protein B C terminus LTQ54_RS13140 PF03485 Arginyl tRNA synthetase N terminal domain LTQ54_RS13140 PF05746 DALR anticodon binding domain LTQ54_RS13140 PF00750 tRNA synthetases class I (R) LTQ54_RS13145 PF06185 YecM protein LTQ54_RS13150 PF01842 ACT domain LTQ54_RS13150 PF00551 Formyl transferase LTQ54_RS13160 PF04851 Type III restriction enzyme, res subunit LTQ54_RS13160 PF13307 Helicase C-terminal domain LTQ54_RS13165 PF00814 Glycoprotease family LTQ54_RS13180 PF00561 alpha/beta hydrolase fold LTQ54_RS13185 PF00501 AMP-binding enzyme LTQ54_RS13185 PF13193 AMP-binding enzyme C-terminal domain LTQ54_RS13190 PF01612 3'-5' exonuclease LTQ54_RS13190 PF00570 HRDC domain LTQ54_RS13195 PF03776 Septum formation topological specificity factor MinE LTQ54_RS13200 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LTQ54_RS13205 PF05209 Septum formation inhibitor MinC, N-terminal domain LTQ54_RS13205 PF03775 Septum formation inhibitor MinC, C-terminal domain LTQ54_RS13210 PF05166 YcgL domain LTQ54_RS13215 PF13406 Transglycosylase SLT domain LTQ54_RS13220 PF03466 LysR substrate binding domain LTQ54_RS13220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS13225 PF01773 Na+ dependent nucleoside transporter N-terminus LTQ54_RS13225 PF07662 Na+ dependent nucleoside transporter C-terminus LTQ54_RS13225 PF07670 Nucleoside recognition LTQ54_RS13235 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LTQ54_RS13235 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LTQ54_RS13250 PF01264 Chorismate synthase LTQ54_RS13255 PF03458 UPF0126 domain LTQ54_RS13260 PF04315 Elongation factor P hydroxylase LTQ54_RS13265 PF08891 YfcL protein LTQ54_RS13270 PF03358 NADPH-dependent FMN reductase LTQ54_RS13275 PF01266 FAD dependent oxidoreductase LTQ54_RS13275 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LTQ54_RS13280 PF00109 Beta-ketoacyl synthase, N-terminal domain LTQ54_RS13280 PF02801 Beta-ketoacyl synthase, C-terminal domain LTQ54_RS13290 PF11890 Domain of unknown function (DUF3410) LTQ54_RS13290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LTQ54_RS13290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LTQ54_RS13295 PF02774 Semialdehyde dehydrogenase, dimerisation domain LTQ54_RS13295 PF01118 Semialdehyde dehydrogenase, NAD binding domain LTQ54_RS13305 PF01416 tRNA pseudouridine synthase LTQ54_RS13310 PF17848 Acetyl-coA carboxylase zinc finger domain LTQ54_RS13310 PF01039 Carboxyl transferase domain LTQ54_RS13315 PF08245 Mur ligase middle domain LTQ54_RS13315 PF02875 Mur ligase family, glutamate ligase domain LTQ54_RS13320 PF05036 Sporulation related domain LTQ54_RS13325 PF02674 Colicin V production protein LTQ54_RS13330 PF00156 Phosphoribosyl transferase domain LTQ54_RS13335 PF03466 LysR substrate binding domain LTQ54_RS13335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS13340 PF00072 Response regulator receiver domain LTQ54_RS13350 PF04304 Protein of unknown function (DUF454) LTQ54_RS13355 PF00156 Phosphoribosyl transferase domain LTQ54_RS13360 PF12170 DNA polymerase III tau subunit V interacting with alpha LTQ54_RS13360 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LTQ54_RS13360 PF12169 DNA polymerase III subunits gamma and tau domain III LTQ54_RS13365 PF02575 YbaB/EbfC DNA-binding family LTQ54_RS13370 PF02132 RecR protein LTQ54_RS13370 PF13662 Toprim domain LTQ54_RS13375 PF00230 Major intrinsic protein LTQ54_RS13380 PF03692 Putative zinc- or iron-chelating domain LTQ54_RS13385 PF03692 Putative zinc- or iron-chelating domain LTQ54_RS13390 PF00245 Alkaline phosphatase LTQ54_RS13395 PF02028 BCCT, betaine/carnitine/choline family transporter LTQ54_RS13410 PF13847 Methyltransferase domain LTQ54_RS13415 PF13426 PAS domain LTQ54_RS13415 PF08447 PAS fold LTQ54_RS13415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS13420 PF01263 Aldose 1-epimerase LTQ54_RS13425 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LTQ54_RS13425 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LTQ54_RS13430 PF01641 SelR domain LTQ54_RS13440 PF07023 Protein of unknown function (DUF1315) LTQ54_RS13445 PF00710 Asparaginase, N-terminal LTQ54_RS13445 PF17763 Glutaminase/Asparaginase C-terminal domain LTQ54_RS13450 PF01343 Peptidase family S49 LTQ54_RS13455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LTQ54_RS13455 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_RS13460 PF00881 Nitroreductase family LTQ54_RS13465 PF01751 Toprim domain LTQ54_RS13465 PF01131 DNA topoisomerase LTQ54_RS13475 PF00106 short chain dehydrogenase LTQ54_RS13480 PF00850 Histone deacetylase domain LTQ54_RS13485 PF02743 Cache domain LTQ54_RS13485 PF00672 HAMP domain LTQ54_RS13485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS13495 PF02082 Transcriptional regulator LTQ54_RS13510 PF00012 Hsp70 protein LTQ54_RS13515 PF00226 DnaJ domain LTQ54_RS13515 PF01556 DnaJ C terminal domain LTQ54_RS13515 PF00684 DnaJ central domain LTQ54_RS13525 PF11893 Domain of unknown function (DUF3413) LTQ54_RS13525 PF00884 Sulfatase LTQ54_RS13530 PF07208 Protein of unknown function (DUF1414) LTQ54_RS13535 PF04245 37-kD nucleoid-associated bacterial protein LTQ54_RS13550 PF03553 Na+/H+ antiporter family LTQ54_RS13555 PF02774 Semialdehyde dehydrogenase, dimerisation domain LTQ54_RS13555 PF01118 Semialdehyde dehydrogenase, NAD binding domain LTQ54_RS13560 PF00520 Ion transport protein LTQ54_RS13560 PF00027 Cyclic nucleotide-binding domain LTQ54_RS13565 PF01914 MarC family integral membrane protein LTQ54_RS13570 PF00465 Iron-containing alcohol dehydrogenase LTQ54_RS13570 PF00171 Aldehyde dehydrogenase family LTQ54_RS13585 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LTQ54_RS13585 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LTQ54_RS13590 PF00462 Glutaredoxin LTQ54_RS13600 PF03553 Na+/H+ antiporter family LTQ54_RS13600 PF13726 Na+-H+ antiporter family LTQ54_RS13605 PF00929 Exonuclease LTQ54_RS13610 PF18393 MotY N-terminal domain LTQ54_RS13610 PF00691 OmpA family LTQ54_RS13615 PF10952 Protein of unknown function (DUF2753) LTQ54_RS13620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LTQ54_RS13625 PF00730 HhH-GPD superfamily base excision DNA repair protein LTQ54_RS13625 PF00633 Helix-hairpin-helix motif LTQ54_RS13625 PF10576 Iron-sulfur binding domain of endonuclease III LTQ54_RS13630 PF02508 Rnf-Nqr subunit, membrane protein LTQ54_RS13635 PF04205 FMN-binding domain LTQ54_RS13640 PF03116 NQR2, RnfD, RnfE family LTQ54_RS13645 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LTQ54_RS13645 PF12838 4Fe-4S dicluster domain LTQ54_RS13645 PF13375 RnfC Barrel sandwich hybrid domain LTQ54_RS13645 PF10531 SLBB domain LTQ54_RS13650 PF04060 Putative Fe-S cluster LTQ54_RS13655 PF02508 Rnf-Nqr subunit, membrane protein LTQ54_RS13665 PF17757 UvrB interaction domain LTQ54_RS13665 PF12344 Ultra-violet resistance protein B LTQ54_RS13665 PF00271 Helicase conserved C-terminal domain LTQ54_RS13665 PF04851 Type III restriction enzyme, res subunit LTQ54_RS13665 PF02151 UvrB/uvrC motif LTQ54_RS13670 PF00072 Response regulator receiver domain LTQ54_RS13670 PF02954 Bacterial regulatory protein, Fis family LTQ54_RS13670 PF00158 Sigma-54 interaction domain LTQ54_RS13675 PF01627 Hpt domain LTQ54_RS13680 PF01933 Uncharacterised protein family UPF0052 LTQ54_RS13685 PF06463 Molybdenum Cofactor Synthesis C LTQ54_RS13685 PF04055 Radical SAM superfamily LTQ54_RS13690 PF00994 Probable molybdopterin binding domain LTQ54_RS13695 PF01967 MoaC family LTQ54_RS13700 PF02597 ThiS family LTQ54_RS13705 PF02391 MoaE protein LTQ54_RS13710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_RS13715 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS13720 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS13720 PF12911 N-terminal TM domain of oligopeptide transport permease C LTQ54_RS13725 PF00005 ABC transporter LTQ54_RS13725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_RS13730 PF00005 ABC transporter LTQ54_RS13730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_RS13735 PF13409 Glutathione S-transferase, N-terminal domain LTQ54_RS13740 PF07085 DRTGG domain LTQ54_RS13740 PF01515 Phosphate acetyl/butaryl transferase LTQ54_RS13745 PF00871 Acetokinase family LTQ54_RS13750 PF04217 Protein of unknown function, DUF412 LTQ54_RS13760 PF02903 Alpha amylase, N-terminal ig-like domain LTQ54_RS13760 PF00128 Alpha amylase, catalytic domain LTQ54_RS13765 PF05230 MASE2 domain LTQ54_RS13765 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS13770 PF01207 Dihydrouridine synthase (Dus) LTQ54_RS13775 PF08334 Type II secretion system (T2SS), protein G LTQ54_RS13775 PF07963 Prokaryotic N-terminal methylation motif LTQ54_RS13780 PF02810 SEC-C motif LTQ54_RS13780 PF07517 SecA DEAD-like domain LTQ54_RS13780 PF01043 SecA preprotein cross-linking domain LTQ54_RS13780 PF07516 SecA Wing and Scaffold domain LTQ54_RS13785 PF02600 Disulfide bond formation protein DsbB LTQ54_RS13790 PF06450 Bacterial Na+/H+ antiporter B (NhaB) LTQ54_RS13795 PF00392 Bacterial regulatory proteins, gntR family LTQ54_RS13795 PF07840 FadR C-terminal domain LTQ54_RS13805 PF01588 Putative tRNA binding domain LTQ54_RS13805 PF09334 tRNA synthetases class I (M) LTQ54_RS13810 PF10609 NUBPL iron-transfer P-loop NTPase LTQ54_RS13815 PF00485 Phosphoribulokinase / Uridine kinase family LTQ54_RS13820 PF05170 AsmA family LTQ54_RS13825 PF12557 Cob(I)alamin adenosyltransferase N terminal LTQ54_RS13825 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LTQ54_RS13830 PF01451 Low molecular weight phosphotyrosine protein phosphatase LTQ54_RS13835 PF01740 STAS domain LTQ54_RS13835 PF00916 Sulfate permease family LTQ54_RS13840 PF00575 S1 RNA binding domain LTQ54_RS13840 PF12111 Polyribonucleotide phosphorylase C terminal LTQ54_RS13840 PF10150 Ribonuclease E/G family LTQ54_RS13845 PF00849 RNA pseudouridylate synthase LTQ54_RS13845 PF01479 S4 domain LTQ54_RS13850 PF02545 Maf-like protein LTQ54_RS13855 PF02620 Large ribosomal RNA subunit accumulation protein YceD LTQ54_RS13860 PF01783 Ribosomal L32p protein family LTQ54_RS13865 PF02504 Fatty acid synthesis protein LTQ54_RS13870 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LTQ54_RS13870 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LTQ54_RS13875 PF00698 Acyl transferase domain LTQ54_RS13885 PF00550 Phosphopantetheine attachment site LTQ54_RS13890 PF00109 Beta-ketoacyl synthase, N-terminal domain LTQ54_RS13890 PF02801 Beta-ketoacyl synthase, C-terminal domain LTQ54_RS13895 PF01063 Amino-transferase class IV LTQ54_RS13900 PF02618 YceG-like family LTQ54_RS13905 PF02223 Thymidylate kinase LTQ54_RS13910 PF09115 DNA polymerase III, delta subunit, C terminal LTQ54_RS13915 PF01026 TatD related DNase LTQ54_RS13920 PF02378 Phosphotransferase system, EIIC LTQ54_RS13920 PF00367 phosphotransferase system, EIIB LTQ54_RS13940 PF01734 Patatin-like phospholipase LTQ54_RS13945 PF00224 Pyruvate kinase, barrel domain LTQ54_RS13945 PF02887 Pyruvate kinase, alpha/beta domain LTQ54_RS13950 PF00480 ROK family LTQ54_RS13955 PF00072 Response regulator receiver domain LTQ54_RS13955 PF01584 CheW-like domain LTQ54_RS13960 PF02811 PHP domain LTQ54_RS13960 PF01336 OB-fold nucleic acid binding domain LTQ54_RS13960 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LTQ54_RS13960 PF07733 Bacterial DNA polymerase III alpha NTPase domain LTQ54_RS13960 PF14579 Helix-hairpin-helix motif LTQ54_RS13970 PF00154 recA bacterial DNA recombination protein LTQ54_RS13975 PF00106 short chain dehydrogenase LTQ54_RS13980 PF01343 Peptidase family S49 LTQ54_RS13980 PF08496 Peptidase family S49 N-terminal LTQ54_RS13985 PF04293 SpoVR like protein LTQ54_RS13990 PF04285 Protein of unknown function (DUF444) LTQ54_RS13995 PF06798 PrkA serine protein kinase C-terminal domain LTQ54_RS13995 PF08298 PrkA AAA domain LTQ54_RS14000 PF06629 MltA-interacting protein MipA LTQ54_RS14015 PF03887 YfbU domain LTQ54_RS14020 PF04055 Radical SAM superfamily LTQ54_RS14030 PF01228 Glycine radical LTQ54_RS14030 PF02901 Pyruvate formate lyase-like LTQ54_RS14045 PF00005 ABC transporter LTQ54_RS14050 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_RS14055 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS14060 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS14065 PF18642 Immunomodulating metalloprotease helical domain LTQ54_RS14065 PF18650 Immunomodulating metalloprotease N-terminal domain LTQ54_RS14065 PF13402 Peptidase M60, enhancin and enhancin-like LTQ54_RS14070 PF03372 Endonuclease/Exonuclease/phosphatase family LTQ54_RS14075 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LTQ54_RS14075 PF00326 Prolyl oligopeptidase family LTQ54_RS14080 PF07690 Major Facilitator Superfamily LTQ54_RS14085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS14085 PF00672 HAMP domain LTQ54_RS14090 PF08007 Cupin superfamily protein LTQ54_RS14095 PF10689 Protein of unknown function (DUF2496) LTQ54_RS14105 PF01925 Sulfite exporter TauE/SafE LTQ54_RS14110 PF06733 DEAD_2 LTQ54_RS14110 PF13307 Helicase C-terminal domain LTQ54_RS14120 PF00849 RNA pseudouridylate synthase LTQ54_RS14125 PF03971 Monomeric isocitrate dehydrogenase LTQ54_RS14135 PF00313 'Cold-shock' DNA-binding domain LTQ54_RS14140 PF02617 ATP-dependent Clp protease adaptor protein ClpS LTQ54_RS14145 PF02861 Clp amino terminal domain, pathogenicity island component LTQ54_RS14145 PF10431 C-terminal, D2-small domain, of ClpB protein LTQ54_RS14145 PF00004 ATPase family associated with various cellular activities (AAA) LTQ54_RS14145 PF07724 AAA domain (Cdc48 subfamily) LTQ54_RS14145 PF17871 AAA lid domain LTQ54_RS14150 PF01176 Translation initiation factor 1A / IF-1 LTQ54_RS14155 PF04377 Arginine-tRNA-protein transferase, C terminus LTQ54_RS14155 PF04376 Arginine-tRNA-protein transferase, N terminus LTQ54_RS14160 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LTQ54_RS14170 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LTQ54_RS14175 PF10692 Protein of unknown function (DUF2498) LTQ54_RS14180 PF08272 Topoisomerase I zinc-ribbon-like LTQ54_RS14180 PF01131 DNA topoisomerase LTQ54_RS14180 PF01751 Toprim domain LTQ54_RS14180 PF01396 Topoisomerase DNA binding C4 zinc finger LTQ54_RS14185 PF00483 Nucleotidyl transferase LTQ54_RS14190 PF00534 Glycosyl transferases group 1 LTQ54_RS14190 PF08323 Starch synthase catalytic domain LTQ54_RS14210 PF04993 TfoX N-terminal domain LTQ54_RS14210 PF04994 TfoX C-terminal domain LTQ54_RS14215 PF00356 Bacterial regulatory proteins, lacI family LTQ54_RS14220 PF02613 Nitrate reductase delta subunit LTQ54_RS14225 PF00072 Response regulator receiver domain LTQ54_RS14225 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS14230 PF02698 DUF218 domain LTQ54_RS14235 PF13847 Methyltransferase domain LTQ54_RS14240 PF17192 MukF middle domain LTQ54_RS14240 PF03882 MukF winged-helix domain LTQ54_RS14240 PF17193 MukF C-terminal domain LTQ54_RS14245 PF04288 MukE-like family LTQ54_RS14250 PF04310 MukB N-terminal LTQ54_RS14250 PF16330 MukB hinge domain LTQ54_RS14255 PF12838 4Fe-4S dicluster domain LTQ54_RS14255 PF00384 Molybdopterin oxidoreductase LTQ54_RS14255 PF01568 Molydopterin dinucleotide binding domain LTQ54_RS14255 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LTQ54_RS14255 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LTQ54_RS14270 PF08443 RimK-like ATP-grasp domain LTQ54_RS14270 PF18030 RimK PreATP-grasp domain LTQ54_RS14275 PF08003 Protein of unknown function (DUF1698) LTQ54_RS14280 PF13649 Methyltransferase domain LTQ54_RS14285 PF01904 Protein of unknown function DUF72 LTQ54_RS14290 PF02938 GAD domain LTQ54_RS14290 PF00152 tRNA synthetases class II (D, K and N) LTQ54_RS14290 PF01336 OB-fold nucleic acid binding domain LTQ54_RS14295 PF02075 Crossover junction endodeoxyribonuclease RuvC LTQ54_RS14300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS14300 PF02203 Tar ligand binding domain homologue LTQ54_RS14300 PF00672 HAMP domain LTQ54_RS14305 PF07499 RuvA, C-terminal domain LTQ54_RS14305 PF01330 RuvA N terminal domain LTQ54_RS14310 PF17864 RuvB AAA lid domain LTQ54_RS14310 PF05491 RuvB C-terminal winged helix domain LTQ54_RS14310 PF05496 Holliday junction DNA helicase RuvB P-loop domain LTQ54_RS14315 PF01654 Cytochrome bd terminal oxidase subunit I LTQ54_RS14320 PF02322 Cytochrome bd terminal oxidase subunit II LTQ54_RS14325 PF08173 Membrane bound YbgT-like protein LTQ54_RS14335 PF03061 Thioesterase superfamily LTQ54_RS14340 PF01618 MotA/TolQ/ExbB proton channel family LTQ54_RS14345 PF02472 Biopolymer transport protein ExbD/TolR LTQ54_RS14355 PF07676 WD40-like Beta Propeller Repeat LTQ54_RS14355 PF04052 TolB amino-terminal domain LTQ54_RS14360 PF00691 OmpA family LTQ54_RS14365 PF16331 TolA binding protein trimerisation LTQ54_RS14365 PF13174 Tetratricopeptide repeat LTQ54_RS14370 PF02445 Quinolinate synthetase A protein LTQ54_RS14375 PF07690 Major Facilitator Superfamily LTQ54_RS14390 PF07715 TonB-dependent Receptor Plug Domain LTQ54_RS14400 PF00501 AMP-binding enzyme LTQ54_RS14400 PF13193 AMP-binding enzyme C-terminal domain LTQ54_RS14405 PF01817 Chorismate mutase type II LTQ54_RS14410 PF00857 Isochorismatase family LTQ54_RS14410 PF00550 Phosphopantetheine attachment site LTQ54_RS14415 PF08021 Siderophore-interacting FAD-binding domain LTQ54_RS14415 PF04954 Siderophore-interacting protein LTQ54_RS14420 PF13193 AMP-binding enzyme C-terminal domain LTQ54_RS14420 PF00501 AMP-binding enzyme LTQ54_RS14425 PF00425 chorismate binding enzyme LTQ54_RS14435 PF00793 DAHP synthetase I family LTQ54_RS14440 PF00501 AMP-binding enzyme LTQ54_RS14440 PF13193 AMP-binding enzyme C-terminal domain LTQ54_RS14440 PF00668 Condensation domain LTQ54_RS14440 PF00550 Phosphopantetheine attachment site LTQ54_RS14440 PF00975 Thioesterase domain LTQ54_RS14445 PF01497 Periplasmic binding protein LTQ54_RS14450 PF01032 FecCD transport family LTQ54_RS14455 PF01032 FecCD transport family LTQ54_RS14460 PF13193 AMP-binding enzyme C-terminal domain LTQ54_RS14460 PF00668 Condensation domain LTQ54_RS14460 PF07993 Male sterility protein LTQ54_RS14460 PF00550 Phosphopantetheine attachment site LTQ54_RS14460 PF00501 AMP-binding enzyme LTQ54_RS14465 PF00005 ABC transporter LTQ54_RS14470 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LTQ54_RS14470 PF01648 4'-phosphopantetheinyl transferase superfamily LTQ54_RS14485 PF09308 LuxQ, periplasmic LTQ54_RS14485 PF00072 Response regulator receiver domain LTQ54_RS14485 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS14485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS14490 PF06610 L-alanine exporter LTQ54_RS14500 PF03616 Sodium/glutamate symporter LTQ54_RS14520 PF01464 Transglycosylase SLT domain LTQ54_RS14520 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LTQ54_RS14540 PF03466 LysR substrate binding domain LTQ54_RS14540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS14545 PF01266 FAD dependent oxidoreductase LTQ54_RS14565 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS14565 PF00072 Response regulator receiver domain LTQ54_RS14570 PF00535 Glycosyl transferase family 2 LTQ54_RS14575 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LTQ54_RS14585 PF08497 Radical SAM N-terminal LTQ54_RS14585 PF11842 Domain of unknown function (DUF3362) LTQ54_RS14585 PF04055 Radical SAM superfamily LTQ54_RS14605 PF03466 LysR substrate binding domain LTQ54_RS14605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS14610 PF08267 Cobalamin-independent synthase, N-terminal domain LTQ54_RS14610 PF01717 Cobalamin-independent synthase, Catalytic domain LTQ54_RS14620 PF03795 YCII-related domain LTQ54_RS14625 PF03061 Thioesterase superfamily LTQ54_RS14630 PF04279 Intracellular septation protein A LTQ54_RS14640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS14640 PF03466 LysR substrate binding domain LTQ54_RS14645 PF00155 Aminotransferase class I and II LTQ54_RS14650 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_RS14655 PF03480 Bacterial extracellular solute-binding protein, family 7 LTQ54_RS14660 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LTQ54_RS14665 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LTQ54_RS14670 PF00375 Sodium:dicarboxylate symporter family LTQ54_RS14680 PF01145 SPFH domain / Band 7 family LTQ54_RS14680 PF16200 C-terminal region of band_7 LTQ54_RS14685 PF00290 Tryptophan synthase alpha chain LTQ54_RS14690 PF00291 Pyridoxal-phosphate dependent enzyme LTQ54_RS14695 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LTQ54_RS14695 PF00218 Indole-3-glycerol phosphate synthase LTQ54_RS14700 PF02885 Glycosyl transferase family, helical bundle domain LTQ54_RS14700 PF00591 Glycosyl transferase family, a/b domain LTQ54_RS14705 PF00117 Glutamine amidotransferase class-I LTQ54_RS14710 PF04715 Anthranilate synthase component I, N terminal region LTQ54_RS14710 PF00425 chorismate binding enzyme LTQ54_RS14715 PF08056 Tryptophan operon leader peptide LTQ54_RS14720 PF02811 PHP domain LTQ54_RS14725 PF01300 Telomere recombination LTQ54_RS14730 PF00849 RNA pseudouridylate synthase LTQ54_RS14730 PF01479 S4 domain LTQ54_RS14740 PF04269 Protein of unknown function, DUF440 LTQ54_RS14745 PF08207 Elongation factor P (EF-P) KOW-like domain LTQ54_RS14745 PF09285 Elongation factor P, C-terminal LTQ54_RS14745 PF01132 Elongation factor P (EF-P) OB domain LTQ54_RS14755 PF00136 DNA polymerase family B LTQ54_RS14755 PF03104 DNA polymerase family B, exonuclease domain LTQ54_RS14760 PF00196 Bacterial regulatory proteins, luxR family LTQ54_RS14760 PF00072 Response regulator receiver domain LTQ54_RS14765 PF01541 GIY-YIG catalytic domain LTQ54_RS14765 PF02151 UvrB/uvrC motif LTQ54_RS14765 PF08459 UvrC Helix-hairpin-helix N-terminal LTQ54_RS14770 PF01066 CDP-alcohol phosphatidyltransferase LTQ54_RS14795 PF00202 Aminotransferase class-III LTQ54_RS14800 PF16653 Saccharopine dehydrogenase C-terminal domain LTQ54_RS14800 PF03435 Saccharopine dehydrogenase NADP binding domain LTQ54_RS14805 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LTQ54_RS14830 PF00994 Probable molybdopterin binding domain LTQ54_RS14835 PF01609 Transposase DDE domain LTQ54_RS14835 PF13006 Insertion element 4 transposase N-terminal LTQ54_RS14840 PF04976 DMSO reductase anchor subunit (DmsC) LTQ54_RS14845 PF13247 4Fe-4S dicluster domain LTQ54_RS14845 PF12800 4Fe-4S binding domain LTQ54_RS14850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LTQ54_RS14850 PF00384 Molybdopterin oxidoreductase LTQ54_RS14850 PF01568 Molydopterin dinucleotide binding domain LTQ54_RS14855 PF02613 Nitrate reductase delta subunit LTQ54_RS14865 PF00111 2Fe-2S iron-sulfur cluster binding domain LTQ54_RS14865 PF00175 Oxidoreductase NAD-binding domain LTQ54_RS14865 PF00970 Oxidoreductase FAD-binding domain LTQ54_RS14870 PF00268 Ribonucleotide reductase, small chain LTQ54_RS14875 PF00317 Ribonucleotide reductase, all-alpha domain LTQ54_RS14875 PF02867 Ribonucleotide reductase, barrel domain LTQ54_RS14875 PF03477 ATP cone domain LTQ54_RS14885 PF00521 DNA gyrase/topoisomerase IV, subunit A LTQ54_RS14885 PF03989 DNA gyrase C-terminal domain, beta-propeller LTQ54_RS14895 PF00581 Rhodanese-like domain LTQ54_RS14900 PF02335 Cytochrome c552 LTQ54_RS14910 PF13247 4Fe-4S dicluster domain LTQ54_RS14915 PF03916 Polysulphide reductase, NrfD LTQ54_RS14920 PF01578 Cytochrome C assembly protein LTQ54_RS14920 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LTQ54_RS14925 PF08534 Redoxin LTQ54_RS14930 PF03918 Cytochrome C biogenesis protein LTQ54_RS14940 PF00925 GTP cyclohydrolase II LTQ54_RS14965 PF01471 Putative peptidoglycan binding domain LTQ54_RS14965 PF03734 L,D-transpeptidase catalytic domain LTQ54_RS14970 PF05951 Bacterial protein of unknown function (DUF882) LTQ54_RS14975 PF00753 Metallo-beta-lactamase superfamily LTQ54_RS14990 PF03480 Bacterial extracellular solute-binding protein, family 7 LTQ54_RS15000 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LTQ54_RS15005 PF07730 Histidine kinase LTQ54_RS15005 PF17200 Single Cache domain 2 LTQ54_RS15010 PF00196 Bacterial regulatory proteins, luxR family LTQ54_RS15010 PF00072 Response regulator receiver domain LTQ54_RS15015 PF02028 BCCT, betaine/carnitine/choline family transporter LTQ54_RS15020 PF02028 BCCT, betaine/carnitine/choline family transporter LTQ54_RS15025 PF02743 Cache domain LTQ54_RS15025 PF00672 HAMP domain LTQ54_RS15025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS15030 PF00664 ABC transporter transmembrane region LTQ54_RS15030 PF00005 ABC transporter LTQ54_RS15035 PF00664 ABC transporter transmembrane region LTQ54_RS15035 PF00005 ABC transporter LTQ54_RS15040 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_RS15070 PF00266 Aminotransferase class-V LTQ54_RS15080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS15080 PF03466 LysR substrate binding domain LTQ54_RS15085 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS15095 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS15095 PF00072 Response regulator receiver domain LTQ54_RS15100 PF06942 GlpM protein LTQ54_RS15105 PF00939 Sodium:sulfate symporter transmembrane region LTQ54_RS15110 PF02698 DUF218 domain LTQ54_RS15115 PF00390 Malic enzyme, N-terminal domain LTQ54_RS15115 PF03949 Malic enzyme, NAD binding domain LTQ54_RS15120 PF00271 Helicase conserved C-terminal domain LTQ54_RS15120 PF00270 DEAD/DEAH box helicase LTQ54_RS15120 PF11898 Domain of unknown function (DUF3418) LTQ54_RS15120 PF04408 Helicase associated domain (HA2) LTQ54_RS15120 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LTQ54_RS15130 PF01259 SAICAR synthetase LTQ54_RS15150 PF00691 OmpA family LTQ54_RS15165 PF02913 FAD linked oxidases, C-terminal domain LTQ54_RS15165 PF01565 FAD binding domain LTQ54_RS15165 PF13183 4Fe-4S dicluster domain LTQ54_RS15170 PF04191 Phospholipid methyltransferase LTQ54_RS15180 PF00221 Aromatic amino acid lyase LTQ54_RS15185 PF17391 Urocanase N-terminal domain LTQ54_RS15185 PF17392 Urocanase C-terminal domain LTQ54_RS15185 PF01175 Urocanase Rossmann-like domain LTQ54_RS15190 PF00491 Arginase family LTQ54_RS15195 PF01979 Amidohydrolase family LTQ54_RS15200 PF07702 UTRA domain LTQ54_RS15200 PF00392 Bacterial regulatory proteins, gntR family LTQ54_RS15205 PF07070 SpoOM protein LTQ54_RS15215 PF13356 Arm DNA-binding domain LTQ54_RS15215 PF00589 Phage integrase family LTQ54_RS15225 PF06114 IrrE N-terminal-like domain LTQ54_RS15270 PF01381 Helix-turn-helix LTQ54_RS15270 PF00717 Peptidase S24-like LTQ54_RS15275 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT LTQ54_RS15330 PF01966 HD domain LTQ54_RS15350 PF00959 Phage lysozyme LTQ54_RS15385 PF00574 Clp protease LTQ54_RS15510 PF04245 37-kD nucleoid-associated bacterial protein LTQ54_RS15515 PF03129 Anticodon binding domain LTQ54_RS15515 PF02824 TGS domain LTQ54_RS15515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LTQ54_RS15515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LTQ54_RS15520 PF00707 Translation initiation factor IF-3, C-terminal domain LTQ54_RS15520 PF05198 Translation initiation factor IF-3, N-terminal domain LTQ54_RS15525 PF01632 Ribosomal protein L35 LTQ54_RS15530 PF00453 Ribosomal protein L20 LTQ54_RS15535 PF04266 ASCH domain LTQ54_RS15550 PF00005 ABC transporter LTQ54_RS15550 PF16326 ABC transporter C-terminal domain LTQ54_RS15550 PF12848 ABC transporter LTQ54_RS15555 PF17932 Tetracyclin repressor-like, C-terminal domain LTQ54_RS15555 PF00440 Bacterial regulatory proteins, tetR family LTQ54_RS15560 PF00171 Aldehyde dehydrogenase family LTQ54_RS15565 PF17944 Arginine decarboxylase C-terminal helical extension LTQ54_RS15565 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LTQ54_RS15565 PF17810 Arginine decarboxylase helical bundle domain LTQ54_RS15570 PF00491 Arginase family LTQ54_RS15580 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_RS15580 PF01464 Transglycosylase SLT domain LTQ54_RS15585 PF00474 Sodium:solute symporter family LTQ54_RS15590 PF01081 KDPG and KHG aldolase LTQ54_RS15595 PF00294 pfkB family carbohydrate kinase LTQ54_RS15600 PF07883 Cupin domain LTQ54_RS15605 PF05426 Alginate lyase LTQ54_RS15605 PF07940 Heparinase II/III-like protein LTQ54_RS15610 PF05426 Alginate lyase LTQ54_RS15610 PF07940 Heparinase II/III-like protein LTQ54_RS15615 PF01557 Fumarylacetoacetate (FAA) hydrolase family LTQ54_RS15620 PF00392 Bacterial regulatory proteins, gntR family LTQ54_RS15620 PF07729 FCD domain LTQ54_RS15625 PF00474 Sodium:solute symporter family LTQ54_RS15635 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LTQ54_RS15635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LTQ54_RS15640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS15640 PF00672 HAMP domain LTQ54_RS15640 PF02743 Cache domain LTQ54_RS15645 PF08787 Alginate lyase LTQ54_RS15650 PF08787 Alginate lyase LTQ54_RS15665 PF08787 Alginate lyase LTQ54_RS15675 PF00392 Bacterial regulatory proteins, gntR family LTQ54_RS15675 PF07729 FCD domain LTQ54_RS15685 PF00392 Bacterial regulatory proteins, gntR family LTQ54_RS15685 PF07729 FCD domain LTQ54_RS15690 PF00571 CBS domain LTQ54_RS15695 PF00929 Exonuclease LTQ54_RS15695 PF02811 PHP domain LTQ54_RS15695 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LTQ54_RS15695 PF11490 DNA polymerase III polC-type N-terminus II LTQ54_RS15695 PF14579 Helix-hairpin-helix motif LTQ54_RS15695 PF07733 Bacterial DNA polymerase III alpha NTPase domain LTQ54_RS15705 PF00672 HAMP domain LTQ54_RS15705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS15705 PF12729 Four helix bundle sensory module for signal transduction LTQ54_RS15715 PF00474 Sodium:solute symporter family LTQ54_RS15725 PF01625 Peptide methionine sulfoxide reductase LTQ54_RS15725 PF01641 SelR domain LTQ54_RS15740 PF01212 Beta-eliminating lyase LTQ54_RS15765 PF02868 Thermolysin metallopeptidase, alpha-helical domain LTQ54_RS15765 PF07504 Fungalysin/Thermolysin Propeptide Motif LTQ54_RS15765 PF03413 Peptidase propeptide and YPEB domain LTQ54_RS15765 PF01447 Thermolysin metallopeptidase, catalytic domain LTQ54_RS15765 PF04151 Bacterial pre-peptidase C-terminal domain LTQ54_RS15805 PF00939 Sodium:sulfate symporter transmembrane region LTQ54_RS15810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS15810 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_RS15810 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS15815 PF00158 Sigma-54 interaction domain LTQ54_RS15815 PF00072 Response regulator receiver domain LTQ54_RS15815 PF02954 Bacterial regulatory protein, Fis family LTQ54_RS15825 PF00753 Metallo-beta-lactamase superfamily LTQ54_RS15840 PF00583 Acetyltransferase (GNAT) family LTQ54_RS15845 PF13673 Acetyltransferase (GNAT) domain LTQ54_RS15855 PF01928 CYTH domain LTQ54_RS15875 PF01717 Cobalamin-independent synthase, Catalytic domain LTQ54_RS15875 PF08267 Cobalamin-independent synthase, N-terminal domain LTQ54_RS15885 PF01925 Sulfite exporter TauE/SafE LTQ54_RS15895 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LTQ54_RS15900 PF01810 LysE type translocator LTQ54_RS15905 PF01117 Aerolysin toxin LTQ54_RS15905 PF03440 Aerolysin/Pertussis toxin (APT) domain LTQ54_RS15920 PF01235 Sodium:alanine symporter family LTQ54_RS15940 PF01235 Sodium:alanine symporter family LTQ54_RS15955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LTQ54_RS15970 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LTQ54_RS15970 PF00989 PAS fold LTQ54_RS15970 PF17203 Single cache domain 3 LTQ54_RS15970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS15975 PF12431 Transcriptional regulator LTQ54_RS15975 PF00072 Response regulator receiver domain LTQ54_RS15980 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LTQ54_RS15980 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LTQ54_RS15985 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LTQ54_RS15990 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LTQ54_RS15990 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LTQ54_RS15995 PF00072 Response regulator receiver domain LTQ54_RS16000 PF09905 DNA-binding protein VF530 LTQ54_RS16015 PF01970 Tripartite tricarboxylate transporter TctA family LTQ54_RS16040 PF07690 Major Facilitator Superfamily LTQ54_RS16055 PF00285 Citrate synthase, C-terminal domain LTQ54_RS16060 PF00330 Aconitase family (aconitate hydratase) LTQ54_RS16060 PF00694 Aconitase C-terminal domain LTQ54_RS16065 PF04303 PrpF protein LTQ54_RS16070 PF16177 Acetyl-coenzyme A synthetase N-terminus LTQ54_RS16070 PF13193 AMP-binding enzyme C-terminal domain LTQ54_RS16070 PF00501 AMP-binding enzyme LTQ54_RS16100 PF04055 Radical SAM superfamily LTQ54_RS16105 PF06508 Queuosine biosynthesis protein QueC LTQ54_RS16110 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS16110 PF17151 Periplasmic sensor domain LTQ54_RS16120 PF00691 OmpA family LTQ54_RS16120 PF13488 Glycine zipper LTQ54_RS16145 PF02310 B12 binding domain LTQ54_RS16145 PF02607 B12 binding domain LTQ54_RS16145 PF02965 Vitamin B12 dependent methionine synthase, activation domain LTQ54_RS16145 PF00809 Pterin binding enzyme LTQ54_RS16145 PF02574 Homocysteine S-methyltransferase LTQ54_RS16170 PF14765 Polyketide synthase dehydratase LTQ54_RS16170 PF08240 Alcohol dehydrogenase GroES-like domain LTQ54_RS16170 PF00698 Acyl transferase domain LTQ54_RS16170 PF02801 Beta-ketoacyl synthase, C-terminal domain LTQ54_RS16170 PF00109 Beta-ketoacyl synthase, N-terminal domain LTQ54_RS16170 PF16197 Ketoacyl-synthetase C-terminal extension LTQ54_RS16170 PF00550 Phosphopantetheine attachment site LTQ54_RS16170 PF08659 KR domain LTQ54_RS16185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS16185 PF03466 LysR substrate binding domain LTQ54_RS16190 PF00962 Adenosine/AMP deaminase LTQ54_RS16195 PF14602 Hexapeptide repeat of succinyl-transferase LTQ54_RS16195 PF12464 Maltose acetyltransferase LTQ54_RS16200 PF17853 GGDEF-like domain LTQ54_RS16200 PF12833 Helix-turn-helix domain LTQ54_RS16210 PF00392 Bacterial regulatory proteins, gntR family LTQ54_RS16210 PF07702 UTRA domain LTQ54_RS16215 PF13378 Enolase C-terminal domain-like LTQ54_RS16215 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LTQ54_RS16220 PF00367 phosphotransferase system, EIIB LTQ54_RS16220 PF02378 Phosphotransferase system, EIIC LTQ54_RS16225 PF00294 pfkB family carbohydrate kinase LTQ54_RS16230 PF01081 KDPG and KHG aldolase LTQ54_RS16235 PF07687 Peptidase dimerisation domain LTQ54_RS16235 PF01546 Peptidase family M20/M25/M40 LTQ54_RS16245 PF01321 Creatinase/Prolidase N-terminal domain LTQ54_RS16245 PF00557 Metallopeptidase family M24 LTQ54_RS16250 PF13309 HTH domain LTQ54_RS16250 PF08348 YheO-like PAS domain LTQ54_RS16255 PF01042 Endoribonuclease L-PSP LTQ54_RS16260 PF00291 Pyridoxal-phosphate dependent enzyme LTQ54_RS16265 PF02600 Disulfide bond formation protein DsbB LTQ54_RS16280 PF01594 AI-2E family transporter LTQ54_RS16310 PF00924 Mechanosensitive ion channel LTQ54_RS16315 PF00781 Diacylglycerol kinase catalytic domain LTQ54_RS16315 PF02142 MGS-like domain LTQ54_RS16340 PF02954 Bacterial regulatory protein, Fis family LTQ54_RS16340 PF01590 GAF domain LTQ54_RS16340 PF00158 Sigma-54 interaction domain LTQ54_RS16345 PF13840 ACT domain LTQ54_RS16345 PF00696 Amino acid kinase family LTQ54_RS16350 PF06339 Ectoine synthase LTQ54_RS16355 PF00202 Aminotransferase class-III LTQ54_RS16360 PF00583 Acetyltransferase (GNAT) family LTQ54_RS16380 PF00440 Bacterial regulatory proteins, tetR family LTQ54_RS16380 PF16925 Tetracyclin repressor-like, C-terminal domain LTQ54_RS16385 PF13186 Iron-sulfur cluster-binding domain LTQ54_RS16385 PF04055 Radical SAM superfamily LTQ54_RS16390 PF00884 Sulfatase LTQ54_RS16400 PF00465 Iron-containing alcohol dehydrogenase LTQ54_RS16410 PF00171 Aldehyde dehydrogenase family LTQ54_RS16415 PF01047 MarR family LTQ54_RS16420 PF00005 ABC transporter LTQ54_RS16420 PF00571 CBS domain LTQ54_RS16425 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS16430 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LTQ54_RS16435 PF00732 GMC oxidoreductase LTQ54_RS16435 PF05199 GMC oxidoreductase LTQ54_RS16440 PF00171 Aldehyde dehydrogenase family LTQ54_RS16445 PF00440 Bacterial regulatory proteins, tetR family LTQ54_RS16445 PF13977 BetI-type transcriptional repressor, C-terminal LTQ54_RS16450 PF00557 Metallopeptidase family M24 LTQ54_RS16450 PF01321 Creatinase/Prolidase N-terminal domain LTQ54_RS16455 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LTQ54_RS16465 PF03480 Bacterial extracellular solute-binding protein, family 7 LTQ54_RS16470 PF01546 Peptidase family M20/M25/M40 LTQ54_RS16470 PF07687 Peptidase dimerisation domain LTQ54_RS16480 PF01037 Lrp/AsnC ligand binding domain LTQ54_RS16485 PF00291 Pyridoxal-phosphate dependent enzyme LTQ54_RS16495 PF00072 Response regulator receiver domain LTQ54_RS16495 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS16500 PF00672 HAMP domain LTQ54_RS16500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS16500 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS16510 PF03413 Peptidase propeptide and YPEB domain LTQ54_RS16510 PF01447 Thermolysin metallopeptidase, catalytic domain LTQ54_RS16510 PF02868 Thermolysin metallopeptidase, alpha-helical domain LTQ54_RS16510 PF04151 Bacterial pre-peptidase C-terminal domain LTQ54_RS16510 PF07504 Fungalysin/Thermolysin Propeptide Motif LTQ54_RS16515 PF04389 Peptidase family M28 LTQ54_RS16515 PF04151 Bacterial pre-peptidase C-terminal domain LTQ54_RS16520 PF01266 FAD dependent oxidoreductase LTQ54_RS16535 PF00158 Sigma-54 interaction domain LTQ54_RS16535 PF00072 Response regulator receiver domain LTQ54_RS16535 PF02954 Bacterial regulatory protein, Fis family LTQ54_RS16540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS16540 PF02743 Cache domain LTQ54_RS16540 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS16545 PF02838 Glycosyl hydrolase family 20, domain 2 LTQ54_RS16545 PF00728 Glycosyl hydrolase family 20, catalytic domain LTQ54_RS16550 PF01081 KDPG and KHG aldolase LTQ54_RS16555 PF00294 pfkB family carbohydrate kinase LTQ54_RS16560 PF00474 Sodium:solute symporter family LTQ54_RS16570 PF07969 Amidohydrolase family LTQ54_RS16580 PF02685 Glucokinase LTQ54_RS16580 PF01418 Helix-turn-helix domain, rpiR family LTQ54_RS16580 PF01380 SIS domain LTQ54_RS16600 PF08019 Phosphoethanolamine transferase EptA/EptB LTQ54_RS16600 PF00884 Sulfatase LTQ54_RS16605 PF01544 CorA-like Mg2+ transporter protein LTQ54_RS16635 PF00005 ABC transporter LTQ54_RS16635 PF00664 ABC transporter transmembrane region LTQ54_RS16640 PF04286 Protein of unknown function (DUF445) LTQ54_RS16645 PF01037 Lrp/AsnC ligand binding domain LTQ54_RS16670 PF00474 Sodium:solute symporter family LTQ54_RS16680 PF00171 Aldehyde dehydrogenase family LTQ54_RS16680 PF01619 Proline dehydrogenase LTQ54_RS16680 PF14850 DNA-binding domain of Proline dehydrogenase LTQ54_RS16680 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LTQ54_RS16685 PF12833 Helix-turn-helix domain LTQ54_RS16700 PF00196 Bacterial regulatory proteins, luxR family LTQ54_RS16700 PF00072 Response regulator receiver domain LTQ54_RS16705 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LTQ54_RS16705 PF01243 Pyridoxamine 5'-phosphate oxidase LTQ54_RS16710 PF02743 Cache domain LTQ54_RS16710 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS16710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS16715 PF00072 Response regulator receiver domain LTQ54_RS16715 PF00158 Sigma-54 interaction domain LTQ54_RS16715 PF02954 Bacterial regulatory protein, Fis family LTQ54_RS16720 PF00529 HlyD membrane-fusion protein of T1SS LTQ54_RS16735 PF00664 ABC transporter transmembrane region LTQ54_RS16735 PF03412 Peptidase C39 family LTQ54_RS16735 PF00005 ABC transporter LTQ54_RS16745 PF05127 Helicase LTQ54_RS16745 PF13718 GNAT acetyltransferase 2 LTQ54_RS16750 PF08775 ParB family LTQ54_RS16750 PF02195 ParB-like nuclease domain LTQ54_RS16755 PF13614 AAA domain LTQ54_RS16755 PF18607 ParA helix turn helix domain LTQ54_RS16770 PF00005 ABC transporter LTQ54_RS16770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_RS16775 PF00005 ABC transporter LTQ54_RS16775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_RS16785 PF00925 GTP cyclohydrolase II LTQ54_RS16785 PF08719 Domain of unknown function (DUF1768) LTQ54_RS16795 PF17149 Periplasmic sensor domain found in signal transduction proteins LTQ54_RS16795 PF00072 Response regulator receiver domain LTQ54_RS16795 PF01627 Hpt domain LTQ54_RS16795 PF00672 HAMP domain LTQ54_RS16795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS16795 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS16800 PF00392 Bacterial regulatory proteins, gntR family LTQ54_RS16800 PF07702 UTRA domain LTQ54_RS16825 PF00005 ABC transporter LTQ54_RS16825 PF08402 TOBE domain LTQ54_RS16835 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS16835 PF00072 Response regulator receiver domain LTQ54_RS16840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS16840 PF00672 HAMP domain LTQ54_RS16840 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS16855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LTQ54_RS16860 PF04209 homogentisate 1,2-dioxygenase LTQ54_RS16870 PF02798 Glutathione S-transferase, N-terminal domain LTQ54_RS16870 PF14497 Glutathione S-transferase, C-terminal domain LTQ54_RS16875 PF00696 Amino acid kinase family LTQ54_RS16880 PF13193 AMP-binding enzyme C-terminal domain LTQ54_RS16880 PF00501 AMP-binding enzyme LTQ54_RS16885 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LTQ54_RS16890 PF01329 Pterin 4 alpha carbinolamine dehydratase LTQ54_RS16900 PF01709 Transcriptional regulator LTQ54_RS16915 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LTQ54_RS16915 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LTQ54_RS16920 PF01546 Peptidase family M20/M25/M40 LTQ54_RS16920 PF07687 Peptidase dimerisation domain LTQ54_RS16930 PF00144 Beta-lactamase LTQ54_RS16935 PF01609 Transposase DDE domain LTQ54_RS16935 PF13006 Insertion element 4 transposase N-terminal LTQ54_RS16945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS16945 PF03466 LysR substrate binding domain LTQ54_RS16985 PF00672 HAMP domain LTQ54_RS16985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS16985 PF02743 Cache domain LTQ54_RS17000 PF00005 ABC transporter LTQ54_RS17005 PF02687 FtsX-like permease family LTQ54_RS17005 PF12704 MacB-like periplasmic core domain LTQ54_RS17020 PF06580 Histidine kinase LTQ54_RS17020 PF07694 5TMR of 5TMR-LYT LTQ54_RS17025 PF04397 LytTr DNA-binding domain LTQ54_RS17025 PF00072 Response regulator receiver domain LTQ54_RS17030 PF00675 Insulinase (Peptidase family M16) LTQ54_RS17030 PF05193 Peptidase M16 inactive domain LTQ54_RS17040 PF07549 SecD/SecF GG Motif LTQ54_RS17040 PF02355 Protein export membrane protein LTQ54_RS17040 PF13721 SecD export protein N-terminal TM region LTQ54_RS17045 PF02355 Protein export membrane protein LTQ54_RS17045 PF07549 SecD/SecF GG Motif LTQ54_RS17060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LTQ54_RS17065 PF07690 Major Facilitator Superfamily LTQ54_RS17075 PF03466 LysR substrate binding domain LTQ54_RS17075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS17080 PF14863 Alkyl sulfatase dimerisation LTQ54_RS17080 PF00753 Metallo-beta-lactamase superfamily LTQ54_RS17080 PF14864 Alkyl sulfatase C-terminal LTQ54_RS17085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS17085 PF03466 LysR substrate binding domain LTQ54_RS17105 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LTQ54_RS17110 PF00106 short chain dehydrogenase LTQ54_RS17145 PF01593 Flavin containing amine oxidoreductase LTQ54_RS17150 PF00106 short chain dehydrogenase LTQ54_RS17160 PF00875 DNA photolyase LTQ54_RS17160 PF03441 FAD binding domain of DNA photolyase LTQ54_RS17170 PF12973 ChrR Cupin-like domain LTQ54_RS17175 PF04542 Sigma-70 region 2 LTQ54_RS17175 PF04545 Sigma-70, region 4 LTQ54_RS17185 PF14552 Tautomerase enzyme LTQ54_RS17195 PF10928 Protein of unknown function (DUF2810) LTQ54_RS17200 PF03616 Sodium/glutamate symporter LTQ54_RS17205 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_RS17205 PF18113 Rubredoxin binding C-terminal domain LTQ54_RS17210 PF00258 Flavodoxin LTQ54_RS17210 PF00753 Metallo-beta-lactamase superfamily LTQ54_RS17210 PF00301 Rubredoxin LTQ54_RS17215 PF00881 Nitroreductase family LTQ54_RS17225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LTQ54_RS17225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LTQ54_RS17225 PF02378 Phosphotransferase system, EIIC LTQ54_RS17230 PF08125 Mannitol dehydrogenase C-terminal domain LTQ54_RS17230 PF01232 Mannitol dehydrogenase Rossmann domain LTQ54_RS17235 PF05068 Mannitol repressor LTQ54_RS17240 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LTQ54_RS17250 PF03466 LysR substrate binding domain LTQ54_RS17250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS17260 PF00730 HhH-GPD superfamily base excision DNA repair protein LTQ54_RS17260 PF06029 AlkA N-terminal domain LTQ54_RS17265 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LTQ54_RS17265 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LTQ54_RS17275 PF03600 Citrate transporter LTQ54_RS17285 PF07670 Nucleoside recognition LTQ54_RS17290 PF07670 Nucleoside recognition LTQ54_RS17295 PF01124 MAPEG family LTQ54_RS17315 PF12852 Cupin LTQ54_RS17315 PF12833 Helix-turn-helix domain LTQ54_RS17340 PF12697 Alpha/beta hydrolase family LTQ54_RS17345 PF08329 Chitinase A, N-terminal domain LTQ54_RS17345 PF00704 Glycosyl hydrolases family 18 LTQ54_RS17355 PF06865 Pyrimidine/purine nucleoside phosphorylase LTQ54_RS17360 PF05726 Pirin C-terminal cupin domain LTQ54_RS17360 PF02678 Pirin LTQ54_RS17370 PF00563 EAL domain LTQ54_RS17370 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS17370 PF03707 Bacterial signalling protein N terminal repeat LTQ54_RS17380 PF07690 Major Facilitator Superfamily LTQ54_RS17385 PF00072 Response regulator receiver domain LTQ54_RS17385 PF00196 Bacterial regulatory proteins, luxR family LTQ54_RS17390 PF07730 Histidine kinase LTQ54_RS17390 PF05231 MASE1 LTQ54_RS17390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS17395 PF07690 Major Facilitator Superfamily LTQ54_RS17400 PF01238 Phosphomannose isomerase type I LTQ54_RS17420 PF17773 UPF0176 acylphosphatase like domain LTQ54_RS17420 PF00581 Rhodanese-like domain LTQ54_RS17435 PF00155 Aminotransferase class I and II LTQ54_RS17440 PF12833 Helix-turn-helix domain LTQ54_RS17440 PF01497 Periplasmic binding protein LTQ54_RS17445 PF01554 MatE LTQ54_RS17450 PF00005 ABC transporter LTQ54_RS17450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_RS17455 PF00005 ABC transporter LTQ54_RS17460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_RS17465 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS17480 PF01070 FMN-dependent dehydrogenase LTQ54_RS17485 PF02652 L-lactate permease LTQ54_RS17490 PF03466 LysR substrate binding domain LTQ54_RS17490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS17495 PF00326 Prolyl oligopeptidase family LTQ54_RS17495 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LTQ54_RS17505 PF17200 Single Cache domain 2 LTQ54_RS17505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS17505 PF00672 HAMP domain LTQ54_RS17510 PF00356 Bacterial regulatory proteins, lacI family LTQ54_RS17520 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS17525 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS17530 PF00232 Glycosyl hydrolase family 1 LTQ54_RS17535 PF17912 MalK OB fold domain LTQ54_RS17535 PF00005 ABC transporter LTQ54_RS17535 PF03459 TOBE domain LTQ54_RS17540 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LTQ54_RS17540 PF06165 Glycosyltransferase family 36 LTQ54_RS17545 PF01263 Aldose 1-epimerase LTQ54_RS17555 PF00356 Bacterial regulatory proteins, lacI family LTQ54_RS17575 PF00005 ABC transporter LTQ54_RS17575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_RS17585 PF13654 AAA domain LTQ54_RS17585 PF05362 Lon protease (S16) C-terminal proteolytic domain LTQ54_RS17590 PF07238 PilZ domain LTQ54_RS17590 PF12945 Flagellar protein YcgR LTQ54_RS17620 PF00892 EamA-like transporter family LTQ54_RS17625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS17625 PF03466 LysR substrate binding domain LTQ54_RS17650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS17650 PF03466 LysR substrate binding domain LTQ54_RS17660 PF01047 MarR family LTQ54_RS17665 PF07681 DoxX LTQ54_RS17675 PF01274 Malate synthase LTQ54_RS17680 PF00205 Thiamine pyrophosphate enzyme, central domain LTQ54_RS17680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LTQ54_RS17680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LTQ54_RS17685 PF01261 Xylose isomerase-like TIM barrel LTQ54_RS17690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LTQ54_RS17690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LTQ54_RS17695 PF13660 Domain of unknown function (DUF4147) LTQ54_RS17695 PF05161 MOFRL family LTQ54_RS17705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS17705 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS17710 PF00072 Response regulator receiver domain LTQ54_RS17710 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS17720 PF00873 AcrB/AcrD/AcrF family LTQ54_RS17725 PF01979 Amidohydrolase family LTQ54_RS17740 PF01979 Amidohydrolase family LTQ54_RS17745 PF00860 Permease family LTQ54_RS17750 PF00860 Permease family LTQ54_RS17755 PF00576 HIUase/Transthyretin family LTQ54_RS17765 PF01014 Uricase LTQ54_RS17765 PF09349 OHCU decarboxylase LTQ54_RS17770 PF03561 Allantoicase repeat LTQ54_RS17775 PF04115 Ureidoglycolate lyase LTQ54_RS17790 PF04229 GrpB protein LTQ54_RS17805 PF13411 MerR HTH family regulatory protein LTQ54_RS17810 PF02627 Carboxymuconolactone decarboxylase family LTQ54_RS17820 PF01979 Amidohydrolase family LTQ54_RS17830 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LTQ54_RS17830 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LTQ54_RS17835 PF00941 FAD binding domain in molybdopterin dehydrogenase LTQ54_RS17835 PF03450 CO dehydrogenase flavoprotein C-terminal domain LTQ54_RS17855 PF01966 HD domain LTQ54_RS17860 PF13419 Haloacid dehalogenase-like hydrolase LTQ54_RS17865 PF03605 Anaerobic c4-dicarboxylate membrane transporter LTQ54_RS17870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS17870 PF03466 LysR substrate binding domain LTQ54_RS17875 PF00171 Aldehyde dehydrogenase family LTQ54_RS17880 PF06441 Epoxide hydrolase N terminus LTQ54_RS17920 PF02264 LamB porin LTQ54_RS17920 PF11471 Maltoporin periplasmic N-terminal extension LTQ54_RS17925 PF00356 Bacterial regulatory proteins, lacI family LTQ54_RS17930 PF00367 phosphotransferase system, EIIB LTQ54_RS17930 PF02378 Phosphotransferase system, EIIC LTQ54_RS17935 PF00294 pfkB family carbohydrate kinase LTQ54_RS17940 PF08244 Glycosyl hydrolases family 32 C terminal LTQ54_RS17940 PF00251 Glycosyl hydrolases family 32 N-terminal domain LTQ54_RS17950 PF14497 Glutathione S-transferase, C-terminal domain LTQ54_RS17950 PF02798 Glutathione S-transferase, N-terminal domain LTQ54_RS17955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS17955 PF03466 LysR substrate binding domain LTQ54_RS17960 PF00672 HAMP domain LTQ54_RS17960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS17965 PF01590 GAF domain LTQ54_RS17965 PF02954 Bacterial regulatory protein, Fis family LTQ54_RS17965 PF00158 Sigma-54 interaction domain LTQ54_RS17970 PF00171 Aldehyde dehydrogenase family LTQ54_RS17975 PF00293 NUDIX domain LTQ54_RS17975 PF13344 Haloacid dehalogenase-like hydrolase LTQ54_RS17990 PF00756 Putative esterase LTQ54_RS17995 PF08240 Alcohol dehydrogenase GroES-like domain LTQ54_RS17995 PF00107 Zinc-binding dehydrogenase LTQ54_RS18005 PF00893 Small Multidrug Resistance protein LTQ54_RS18015 PF00246 Zinc carboxypeptidase LTQ54_RS18020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_RS18030 PF03707 Bacterial signalling protein N terminal repeat LTQ54_RS18030 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS18030 PF00563 EAL domain LTQ54_RS18045 PF01238 Phosphomannose isomerase type I LTQ54_RS18050 PF02378 Phosphotransferase system, EIIC LTQ54_RS18050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LTQ54_RS18050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LTQ54_RS18055 PF12833 Helix-turn-helix domain LTQ54_RS18065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LTQ54_RS18080 PF13977 BetI-type transcriptional repressor, C-terminal LTQ54_RS18080 PF00440 Bacterial regulatory proteins, tetR family LTQ54_RS18090 PF11066 Protein of unknown function (DUF2867) LTQ54_RS18090 PF13460 NAD(P)H-binding LTQ54_RS18100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS18100 PF00672 HAMP domain LTQ54_RS18100 PF12729 Four helix bundle sensory module for signal transduction LTQ54_RS18110 PF00171 Aldehyde dehydrogenase family LTQ54_RS18120 PF02566 OsmC-like protein LTQ54_RS18125 PF01047 MarR family LTQ54_RS18130 PF03222 Tryptophan/tyrosine permease family LTQ54_RS18135 PF07690 Major Facilitator Superfamily LTQ54_RS18140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS18140 PF03466 LysR substrate binding domain LTQ54_RS18150 PF00155 Aminotransferase class I and II LTQ54_RS18150 PF00392 Bacterial regulatory proteins, gntR family LTQ54_RS18165 PF00672 HAMP domain LTQ54_RS18165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS18165 PF02743 Cache domain LTQ54_RS18175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS18175 PF03466 LysR substrate binding domain LTQ54_RS18185 PF17200 Single Cache domain 2 LTQ54_RS18185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS18185 PF00672 HAMP domain LTQ54_RS18200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS18200 PF03466 LysR substrate binding domain LTQ54_RS18210 PF13378 Enolase C-terminal domain-like LTQ54_RS18210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LTQ54_RS18215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS18215 PF02743 Cache domain LTQ54_RS18215 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS18220 PF00158 Sigma-54 interaction domain LTQ54_RS18220 PF00072 Response regulator receiver domain LTQ54_RS18220 PF02954 Bacterial regulatory protein, Fis family LTQ54_RS18235 PF00005 ABC transporter LTQ54_RS18240 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS18245 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS18270 PF03606 C4-dicarboxylate anaerobic carrier LTQ54_RS18275 PF00483 Nucleotidyl transferase LTQ54_RS18280 PF03922 OmpW family LTQ54_RS18290 PF00501 AMP-binding enzyme LTQ54_RS18295 PF00668 Condensation domain LTQ54_RS18295 PF00501 AMP-binding enzyme LTQ54_RS18295 PF00550 Phosphopantetheine attachment site LTQ54_RS18295 PF13193 AMP-binding enzyme C-terminal domain LTQ54_RS18300 PF00106 short chain dehydrogenase LTQ54_RS18305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS18305 PF03466 LysR substrate binding domain LTQ54_RS18310 PF01638 HxlR-like helix-turn-helix LTQ54_RS18325 PF13460 NAD(P)H-binding LTQ54_RS18330 PF03466 LysR substrate binding domain LTQ54_RS18330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS18340 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LTQ54_RS18370 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LTQ54_RS18375 PF04542 Sigma-70 region 2 LTQ54_RS18375 PF08281 Sigma-70, region 4 LTQ54_RS18395 PF04013 Putative SAM-dependent RNA methyltransferase LTQ54_RS18460 PF01554 MatE LTQ54_RS18465 PF00391 PEP-utilising enzyme, mobile domain LTQ54_RS18465 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LTQ54_RS18465 PF02896 PEP-utilising enzyme, TIM barrel domain LTQ54_RS18470 PF03618 Kinase/pyrophosphorylase LTQ54_RS18475 PF04399 Glutaredoxin 2, C terminal domain LTQ54_RS18475 PF13417 Glutathione S-transferase, N-terminal domain LTQ54_RS18485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LTQ54_RS18505 PF03009 Glycerophosphoryl diester phosphodiesterase family LTQ54_RS18510 PF17912 MalK OB fold domain LTQ54_RS18510 PF00005 ABC transporter LTQ54_RS18515 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS18520 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS18525 PF13416 Bacterial extracellular solute-binding protein LTQ54_RS18545 PF18030 RimK PreATP-grasp domain LTQ54_RS18545 PF08443 RimK-like ATP-grasp domain LTQ54_RS18550 PF08443 RimK-like ATP-grasp domain LTQ54_RS18550 PF18030 RimK PreATP-grasp domain LTQ54_RS18555 PF12793 Sugar transport-related sRNA regulator N-term LTQ54_RS18555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_RS18560 PF12706 Beta-lactamase superfamily domain LTQ54_RS18585 PF00171 Aldehyde dehydrogenase family LTQ54_RS18590 PF09339 IclR helix-turn-helix domain LTQ54_RS18590 PF01614 Bacterial transcriptional regulator LTQ54_RS18595 PF01515 Phosphate acetyl/butaryl transferase LTQ54_RS18600 PF01925 Sulfite exporter TauE/SafE LTQ54_RS18605 PF06213 Cobalamin biosynthesis protein CobT LTQ54_RS18605 PF11775 Cobalamin biosynthesis protein CobT VWA domain LTQ54_RS18610 PF08406 CbbQ/NirQ/NorQ C-terminal LTQ54_RS18610 PF07728 AAA domain (dynein-related subfamily) LTQ54_RS18610 PF12556 Cobaltochelatase CobS subunit N terminal LTQ54_RS18615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LTQ54_RS18615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LTQ54_RS18615 PF00205 Thiamine pyrophosphate enzyme, central domain LTQ54_RS18630 PF01266 FAD dependent oxidoreductase LTQ54_RS18635 PF03480 Bacterial extracellular solute-binding protein, family 7 LTQ54_RS18640 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LTQ54_RS18645 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LTQ54_RS18645 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LTQ54_RS18660 PF02028 BCCT, betaine/carnitine/choline family transporter LTQ54_RS18670 PF05661 Protein of unknown function (DUF808) LTQ54_RS18675 PF01979 Amidohydrolase family LTQ54_RS18685 PF00111 2Fe-2S iron-sulfur cluster binding domain LTQ54_RS18685 PF03476 MOSC N-terminal beta barrel domain LTQ54_RS18685 PF03473 MOSC domain LTQ54_RS18690 PF02540 NAD synthase LTQ54_RS18695 PF01467 Cytidylyltransferase-like LTQ54_RS18735 PF00005 ABC transporter LTQ54_RS18740 PF01032 FecCD transport family LTQ54_RS18750 PF02472 Biopolymer transport protein ExbD/TolR LTQ54_RS18755 PF01618 MotA/TolQ/ExbB proton channel family LTQ54_RS18760 PF03544 Gram-negative bacterial TonB protein C-terminal LTQ54_RS18765 PF04055 Radical SAM superfamily LTQ54_RS18770 PF06228 Haem utilisation ChuX/HutX LTQ54_RS18775 PF01243 Pyridoxamine 5'-phosphate oxidase LTQ54_RS18780 PF01923 Cobalamin adenosyltransferase LTQ54_RS18785 PF01584 CheW-like domain LTQ54_RS18785 PF00072 Response regulator receiver domain LTQ54_RS18795 PF00128 Alpha amylase, catalytic domain LTQ54_RS18800 PF00672 HAMP domain LTQ54_RS18800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS18800 PF02743 Cache domain LTQ54_RS18805 PF07670 Nucleoside recognition LTQ54_RS18830 PF01551 Peptidase family M23 LTQ54_RS18830 PF01476 LysM domain LTQ54_RS18830 PF08525 Opacity-associated protein A N-terminal motif LTQ54_RS18835 PF08447 PAS fold LTQ54_RS18835 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS18835 PF00563 EAL domain LTQ54_RS18835 PF08448 PAS fold LTQ54_RS18840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS18840 PF03466 LysR substrate binding domain LTQ54_RS18845 PF07690 Major Facilitator Superfamily LTQ54_RS18855 PF00462 Glutaredoxin LTQ54_RS18860 PF00892 EamA-like transporter family LTQ54_RS18880 PF00085 Thioredoxin LTQ54_RS18885 PF11412 Disulphide bond corrector protein DsbC LTQ54_RS18885 PF02683 Cytochrome C biogenesis protein transmembrane region LTQ54_RS18900 PF05552 Conserved TM helix LTQ54_RS18900 PF00924 Mechanosensitive ion channel LTQ54_RS18945 PF00248 Aldo/keto reductase family LTQ54_RS18950 PF00270 DEAD/DEAH box helicase LTQ54_RS18950 PF03880 DbpA RNA binding domain LTQ54_RS18950 PF00271 Helicase conserved C-terminal domain LTQ54_RS18965 PF00929 Exonuclease LTQ54_RS18965 PF02811 PHP domain LTQ54_RS18965 PF14579 Helix-hairpin-helix motif LTQ54_RS18965 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LTQ54_RS18965 PF07733 Bacterial DNA polymerase III alpha NTPase domain LTQ54_RS18965 PF11490 DNA polymerase III polC-type N-terminus II LTQ54_RS18975 PF00271 Helicase conserved C-terminal domain LTQ54_RS18975 PF00270 DEAD/DEAH box helicase LTQ54_RS18980 PF00881 Nitroreductase family LTQ54_RS18990 PF00037 4Fe-4S binding domain LTQ54_RS18990 PF11953 Domain of unknown function (DUF3470) LTQ54_RS18995 PF08032 RNA 2'-O ribose methyltransferase substrate binding LTQ54_RS18995 PF00588 SpoU rRNA Methylase family LTQ54_RS19000 PF00248 Aldo/keto reductase family LTQ54_RS19010 PF07687 Peptidase dimerisation domain LTQ54_RS19010 PF01546 Peptidase family M20/M25/M40 LTQ54_RS19025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LTQ54_RS19030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LTQ54_RS19035 PF00873 AcrB/AcrD/AcrF family LTQ54_RS19040 PF01575 MaoC like domain LTQ54_RS19045 PF12849 PBP superfamily domain LTQ54_RS19055 PF12833 Helix-turn-helix domain LTQ54_RS19060 PF17876 Cold shock domain LTQ54_RS19060 PF08206 Ribonuclease B OB domain LTQ54_RS19060 PF00773 RNB domain LTQ54_RS19060 PF00575 S1 RNA binding domain LTQ54_RS19065 PF00270 DEAD/DEAH box helicase LTQ54_RS19065 PF00271 Helicase conserved C-terminal domain LTQ54_RS19065 PF03880 DbpA RNA binding domain LTQ54_RS19070 PF00871 Acetokinase family LTQ54_RS19080 PF00571 CBS domain LTQ54_RS19080 PF00291 Pyridoxal-phosphate dependent enzyme LTQ54_RS19085 PF07883 Cupin domain LTQ54_RS19085 PF01381 Helix-turn-helix LTQ54_RS19090 PF03594 Benzoate membrane transport protein LTQ54_RS19115 PF08240 Alcohol dehydrogenase GroES-like domain LTQ54_RS19115 PF00107 Zinc-binding dehydrogenase LTQ54_RS19140 PF00892 EamA-like transporter family LTQ54_RS19145 PF00128 Alpha amylase, catalytic domain LTQ54_RS19150 PF01494 FAD binding domain LTQ54_RS19155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS19155 PF03466 LysR substrate binding domain LTQ54_RS19160 PF01554 MatE LTQ54_RS19190 PF00478 IMP dehydrogenase / GMP reductase domain LTQ54_RS19195 PF02223 Thymidylate kinase LTQ54_RS19215 PF08378 Nuclease-related domain LTQ54_RS19230 PF18500 CadC C-terminal domain 1 LTQ54_RS19230 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS19240 PF13417 Glutathione S-transferase, N-terminal domain LTQ54_RS19240 PF00043 Glutathione S-transferase, C-terminal domain LTQ54_RS19265 PF00892 EamA-like transporter family LTQ54_RS19270 PF08543 Phosphomethylpyrimidine kinase LTQ54_RS19275 PF00005 ABC transporter LTQ54_RS19280 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS19285 PF09084 NMT1/THI5 like LTQ54_RS19290 PF03070 TENA/THI-4/PQQC family LTQ54_RS19295 PF02110 Hydroxyethylthiazole kinase family LTQ54_RS19300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS19300 PF00672 HAMP domain LTQ54_RS19300 PF02743 Cache domain LTQ54_RS19305 PF02581 Thiamine monophosphate synthase LTQ54_RS19315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS19315 PF03466 LysR substrate binding domain LTQ54_RS19325 PF12833 Helix-turn-helix domain LTQ54_RS19325 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LTQ54_RS19330 PF01979 Amidohydrolase family LTQ54_RS19355 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS19365 PF13533 Biotin-lipoyl like LTQ54_RS19375 PF01594 AI-2E family transporter LTQ54_RS19405 PF01497 Periplasmic binding protein LTQ54_RS19410 PF01032 FecCD transport family LTQ54_RS19415 PF01032 FecCD transport family LTQ54_RS19420 PF00005 ABC transporter LTQ54_RS19425 PF00072 Response regulator receiver domain LTQ54_RS19430 PF00672 HAMP domain LTQ54_RS19430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS19430 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS19430 PF01627 Hpt domain LTQ54_RS19430 PF00072 Response regulator receiver domain LTQ54_RS19430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LTQ54_RS19435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS19435 PF03466 LysR substrate binding domain LTQ54_RS19440 PF07690 Major Facilitator Superfamily LTQ54_RS19445 PF05547 Immune inhibitor A peptidase M6 LTQ54_RS19445 PF00801 PKD domain LTQ54_RS19460 PF01037 Lrp/AsnC ligand binding domain LTQ54_RS19465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS19465 PF08447 PAS fold LTQ54_RS19470 PF00456 Transketolase, thiamine diphosphate binding domain LTQ54_RS19470 PF02780 Transketolase, C-terminal domain LTQ54_RS19470 PF02779 Transketolase, pyrimidine binding domain LTQ54_RS19475 PF00923 Transaldolase/Fructose-6-phosphate aldolase LTQ54_RS19485 PF00704 Glycosyl hydrolases family 18 LTQ54_RS19485 PF08329 Chitinase A, N-terminal domain LTQ54_RS19490 PF00360 Phytochrome region LTQ54_RS19490 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS19490 PF00563 EAL domain LTQ54_RS19490 PF01590 GAF domain LTQ54_RS19495 PF00581 Rhodanese-like domain LTQ54_RS19515 PF00899 ThiF family LTQ54_RS19520 PF03454 MoeA C-terminal region (domain IV) LTQ54_RS19520 PF03453 MoeA N-terminal region (domain I and II) LTQ54_RS19520 PF00994 Probable molybdopterin binding domain LTQ54_RS19525 PF01227 GTP cyclohydrolase I LTQ54_RS19530 PF03577 Peptidase family C69 LTQ54_RS19540 PF07152 YaeQ protein LTQ54_RS19545 PF00313 'Cold-shock' DNA-binding domain LTQ54_RS19550 PF07995 Glucose / Sorbosone dehydrogenase LTQ54_RS19555 PF07690 Major Facilitator Superfamily LTQ54_RS19560 PF00005 ABC transporter LTQ54_RS19570 PF12833 Helix-turn-helix domain LTQ54_RS19575 PF07715 TonB-dependent Receptor Plug Domain LTQ54_RS19575 PF00593 TonB dependent receptor LTQ54_RS19585 PF01032 FecCD transport family LTQ54_RS19590 PF00378 Enoyl-CoA hydratase/isomerase LTQ54_RS19605 PF00155 Aminotransferase class I and II LTQ54_RS19610 PF06826 Predicted Permease Membrane Region LTQ54_RS19610 PF02080 TrkA-C domain LTQ54_RS19620 PF13533 Biotin-lipoyl like LTQ54_RS19625 PF00873 AcrB/AcrD/AcrF family LTQ54_RS19635 PF02253 Phospholipase A1 LTQ54_RS19640 PF18500 CadC C-terminal domain 1 LTQ54_RS19640 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS19650 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_RS19650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LTQ54_RS19655 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_RS19665 PF00664 ABC transporter transmembrane region LTQ54_RS19665 PF00005 ABC transporter LTQ54_RS19670 PF00529 HlyD membrane-fusion protein of T1SS LTQ54_RS19690 PF00529 HlyD membrane-fusion protein of T1SS LTQ54_RS19690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LTQ54_RS19695 PF00873 AcrB/AcrD/AcrF family LTQ54_RS19725 PF03831 PhnA domain LTQ54_RS19725 PF08274 PhnA Zinc-Ribbon LTQ54_RS19745 PF12833 Helix-turn-helix domain LTQ54_RS19745 PF02311 AraC-like ligand binding domain LTQ54_RS19760 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS19765 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_RS19770 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS19775 PF00005 ABC transporter LTQ54_RS19780 PF00465 Iron-containing alcohol dehydrogenase LTQ54_RS19785 PF12833 Helix-turn-helix domain LTQ54_RS19785 PF06719 AraC-type transcriptional regulator N-terminus LTQ54_RS19795 PF01042 Endoribonuclease L-PSP LTQ54_RS19825 PF14602 Hexapeptide repeat of succinyl-transferase LTQ54_RS19825 PF12804 MobA-like NTP transferase domain LTQ54_RS19825 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_RS19845 PF04224 Protein of unknown function, DUF417 LTQ54_RS19850 PF01042 Endoribonuclease L-PSP LTQ54_RS19855 PF02028 BCCT, betaine/carnitine/choline family transporter LTQ54_RS19860 PF00704 Glycosyl hydrolases family 18 LTQ54_RS19860 PF06483 Chitinase C LTQ54_RS19865 PF07694 5TMR of 5TMR-LYT LTQ54_RS19865 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS19880 PF00768 D-alanyl-D-alanine carboxypeptidase LTQ54_RS19880 PF07943 Penicillin-binding protein 5, C-terminal domain LTQ54_RS19890 PF00849 RNA pseudouridylate synthase LTQ54_RS19900 PF00107 Zinc-binding dehydrogenase LTQ54_RS19900 PF16884 N-terminal domain of oxidoreductase LTQ54_RS19905 PF00440 Bacterial regulatory proteins, tetR family LTQ54_RS19905 PF16925 Tetracyclin repressor-like, C-terminal domain LTQ54_RS19910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LTQ54_RS19910 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LTQ54_RS19920 PF00691 OmpA family LTQ54_RS19920 PF04972 BON domain LTQ54_RS19930 PF00158 Sigma-54 interaction domain LTQ54_RS19930 PF01590 GAF domain LTQ54_RS19935 PF00970 Oxidoreductase FAD-binding domain LTQ54_RS19935 PF00042 Globin LTQ54_RS19935 PF00175 Oxidoreductase NAD-binding domain LTQ54_RS19945 PF00654 Voltage gated chloride channel LTQ54_RS19950 PF02492 CobW/HypB/UreG, nucleotide-binding domain LTQ54_RS19950 PF07683 Cobalamin synthesis protein cobW C-terminal domain LTQ54_RS19955 PF00270 DEAD/DEAH box helicase LTQ54_RS19955 PF00271 Helicase conserved C-terminal domain LTQ54_RS19960 PF01810 LysE type translocator LTQ54_RS19985 PF00072 Response regulator receiver domain LTQ54_RS19985 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS19990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS19990 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS20005 PF01037 Lrp/AsnC ligand binding domain LTQ54_RS20030 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS20030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS20035 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS20035 PF00072 Response regulator receiver domain LTQ54_RS20040 PF00873 AcrB/AcrD/AcrF family LTQ54_RS20050 PF02321 Outer membrane efflux protein LTQ54_RS20060 PF03264 NapC/NirT cytochrome c family, N-terminal region LTQ54_RS20065 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LTQ54_RS20070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LTQ54_RS20070 PF00384 Molybdopterin oxidoreductase LTQ54_RS20070 PF01568 Molydopterin dinucleotide binding domain LTQ54_RS20080 PF00037 4Fe-4S binding domain LTQ54_RS20080 PF12800 4Fe-4S binding domain LTQ54_RS20080 PF13187 4Fe-4S dicluster domain LTQ54_RS20085 PF00672 HAMP domain LTQ54_RS20085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS20085 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LTQ54_RS20085 PF07730 Histidine kinase LTQ54_RS20090 PF00196 Bacterial regulatory proteins, luxR family LTQ54_RS20090 PF00072 Response regulator receiver domain LTQ54_RS20095 PF03606 C4-dicarboxylate anaerobic carrier LTQ54_RS20110 PF12262 Bacterial virulence factor lipase N-terminal LTQ54_RS20115 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LTQ54_RS20120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LTQ54_RS20125 PF00873 AcrB/AcrD/AcrF family LTQ54_RS20145 PF00392 Bacterial regulatory proteins, gntR family LTQ54_RS20145 PF07702 UTRA domain LTQ54_RS20150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LTQ54_RS20150 PF02378 Phosphotransferase system, EIIC LTQ54_RS20150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LTQ54_RS20155 PF09261 Alpha mannosidase middle domain LTQ54_RS20155 PF07748 Glycosyl hydrolases family 38 C-terminal domain LTQ54_RS20155 PF01074 Glycosyl hydrolases family 38 N-terminal domain LTQ54_RS20160 PF02595 Glycerate kinase family LTQ54_RS20165 PF01238 Phosphomannose isomerase type I LTQ54_RS20190 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS20190 PF05230 MASE2 domain LTQ54_RS20195 PF01926 50S ribosome-binding GTPase LTQ54_RS20200 PF00034 Cytochrome c LTQ54_RS20205 PF00196 Bacterial regulatory proteins, luxR family LTQ54_RS20240 PF01212 Beta-eliminating lyase LTQ54_RS20245 PF00293 NUDIX domain LTQ54_RS20250 PF12592 Protein of unknown function (DUF3763) LTQ54_RS20250 PF07728 AAA domain (dynein-related subfamily) LTQ54_RS20250 PF17868 AAA lid domain LTQ54_RS20255 PF05762 VWA domain containing CoxE-like protein LTQ54_RS20280 PF00672 HAMP domain LTQ54_RS20280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS20315 PF04393 Protein of unknown function (DUF535) LTQ54_RS20330 PF02472 Biopolymer transport protein ExbD/TolR LTQ54_RS20335 PF01618 MotA/TolQ/ExbB proton channel family LTQ54_RS20370 PF04542 Sigma-70 region 2 LTQ54_RS20370 PF08281 Sigma-70, region 4 LTQ54_RS20380 PF03150 Di-haem cytochrome c peroxidase LTQ54_RS20385 PF03150 Di-haem cytochrome c peroxidase LTQ54_RS20385 PF00034 Cytochrome c LTQ54_RS20395 PF18465 Rieske 3Fe-4S LTQ54_RS20395 PF00384 Molybdopterin oxidoreductase LTQ54_RS20395 PF01568 Molydopterin dinucleotide binding domain LTQ54_RS20410 PF04324 BFD-like [2Fe-2S] binding domain LTQ54_RS20410 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LTQ54_RS20410 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LTQ54_RS20410 PF18267 Rubredoxin NAD+ reductase C-terminal domain LTQ54_RS20410 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_RS20415 PF13806 Rieske-like [2Fe-2S] domain LTQ54_RS20420 PF01226 Formate/nitrite transporter LTQ54_RS20425 PF10414 Sirohaem synthase dimerisation region LTQ54_RS20425 PF14824 Sirohaem biosynthesis protein central LTQ54_RS20425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LTQ54_RS20440 PF00072 Response regulator receiver domain LTQ54_RS20440 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS20445 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS20445 PF00672 HAMP domain LTQ54_RS20445 PF16527 Two-component sensor protein CpxA, periplasmic domain LTQ54_RS20445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS20450 PF00375 Sodium:dicarboxylate symporter family LTQ54_RS20455 PF07715 TonB-dependent Receptor Plug Domain LTQ54_RS20455 PF00593 TonB dependent receptor LTQ54_RS20465 PF01618 MotA/TolQ/ExbB proton channel family LTQ54_RS20470 PF01618 MotA/TolQ/ExbB proton channel family LTQ54_RS20475 PF02472 Biopolymer transport protein ExbD/TolR LTQ54_RS20520 PF01297 Zinc-uptake complex component A periplasmic LTQ54_RS20525 PF00005 ABC transporter LTQ54_RS20530 PF00950 ABC 3 transport family LTQ54_RS20550 PF11756 Nitrous oxide-stimulated promoter LTQ54_RS20555 PF01554 MatE LTQ54_RS20575 PF07690 Major Facilitator Superfamily LTQ54_RS20580 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LTQ54_RS20580 PF12833 Helix-turn-helix domain LTQ54_RS20585 PF13193 AMP-binding enzyme C-terminal domain LTQ54_RS20585 PF00501 AMP-binding enzyme LTQ54_RS20590 PF05199 GMC oxidoreductase LTQ54_RS20590 PF00732 GMC oxidoreductase LTQ54_RS20595 PF00085 Thioredoxin LTQ54_RS20600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LTQ54_RS20600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LTQ54_RS20615 PF04143 Sulphur transport LTQ54_RS20630 PF13597 Anaerobic ribonucleoside-triphosphate reductase LTQ54_RS20630 PF03477 ATP cone domain LTQ54_RS20640 PF00155 Aminotransferase class I and II LTQ54_RS20645 PF08443 RimK-like ATP-grasp domain LTQ54_RS20645 PF18030 RimK PreATP-grasp domain LTQ54_RS20650 PF12848 ABC transporter LTQ54_RS20650 PF00005 ABC transporter LTQ54_RS20665 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LTQ54_RS20665 PF07685 CobB/CobQ-like glutamine amidotransferase domain LTQ54_RS20675 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS20680 PF03459 TOBE domain LTQ54_RS20680 PF00005 ABC transporter LTQ54_RS20690 PF01590 GAF domain LTQ54_RS20690 PF00563 EAL domain LTQ54_RS20690 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS20690 PF00360 Phytochrome region LTQ54_RS20700 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS20700 PF17158 Membrane-associated sensor, integral membrane domain LTQ54_RS20715 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LTQ54_RS20715 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LTQ54_RS20715 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LTQ54_RS20720 PF02233 NAD(P) transhydrogenase beta subunit LTQ54_RS20730 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS20730 PF00072 Response regulator receiver domain LTQ54_RS20745 PF03701 Uncharacterised protein family (UPF0181) LTQ54_RS20750 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS20750 PF08448 PAS fold LTQ54_RS20775 PF01253 Translation initiation factor SUI1 LTQ54_RS20790 PF07478 D-ala D-ala ligase C-terminus LTQ54_RS20790 PF01820 D-ala D-ala ligase N-terminus LTQ54_RS20795 PF05036 Sporulation related domain LTQ54_RS20800 PF00583 Acetyltransferase (GNAT) family LTQ54_RS20800 PF13380 CoA binding domain LTQ54_RS20800 PF13607 Succinyl-CoA ligase like flavodoxin domain LTQ54_RS20805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS20805 PF03466 LysR substrate binding domain LTQ54_RS20810 PF04886 PT repeat LTQ54_RS20810 PF00593 TonB dependent receptor LTQ54_RS20810 PF07715 TonB-dependent Receptor Plug Domain LTQ54_RS20815 PF16363 GDP-mannose 4,6 dehydratase LTQ54_RS20820 PF03707 Bacterial signalling protein N terminal repeat LTQ54_RS20820 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS20820 PF00563 EAL domain LTQ54_RS20835 PF03746 LamB/YcsF family LTQ54_RS20840 PF02682 Carboxyltransferase domain, subdomain C and D LTQ54_RS20845 PF02626 Carboxyltransferase domain, subdomain A and B LTQ54_RS20860 PF00005 ABC transporter LTQ54_RS20865 PF13472 GDSL-like Lipase/Acylhydrolase family LTQ54_RS20870 PF07055 Enoyl reductase FAD binding domain LTQ54_RS20870 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LTQ54_RS20870 PF12241 Trans-2-enoyl-CoA reductase catalytic region LTQ54_RS20875 PF00563 EAL domain LTQ54_RS20875 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS20875 PF00498 FHA domain LTQ54_RS20885 PF03717 Penicillin-binding Protein dimerisation domain LTQ54_RS20885 PF00905 Penicillin binding protein transpeptidase domain LTQ54_RS20890 PF00684 DnaJ central domain LTQ54_RS20890 PF00226 DnaJ domain LTQ54_RS20890 PF01556 DnaJ C terminal domain LTQ54_RS20910 PF00892 EamA-like transporter family LTQ54_RS20915 PF12793 Sugar transport-related sRNA regulator N-term LTQ54_RS20915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_RS20925 PF03061 Thioesterase superfamily LTQ54_RS20930 PF01435 Peptidase family M48 LTQ54_RS20940 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LTQ54_RS20945 PF12262 Bacterial virulence factor lipase N-terminal LTQ54_RS20960 PF03466 LysR substrate binding domain LTQ54_RS20960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS20975 PF08543 Phosphomethylpyrimidine kinase LTQ54_RS20980 PF00155 Aminotransferase class I and II LTQ54_RS20985 PF06826 Predicted Permease Membrane Region LTQ54_RS20985 PF02080 TrkA-C domain LTQ54_RS20995 PF13533 Biotin-lipoyl like LTQ54_RS21010 PF00135 Carboxylesterase family LTQ54_RS21015 PF13091 PLD-like domain LTQ54_RS21020 PF01177 Asp/Glu/Hydantoin racemase LTQ54_RS21030 PF00270 DEAD/DEAH box helicase LTQ54_RS21030 PF00271 Helicase conserved C-terminal domain LTQ54_RS21045 PF03741 Integral membrane protein TerC family LTQ54_RS21050 PF00149 Calcineurin-like phosphoesterase LTQ54_RS21050 PF02872 5'-nucleotidase, C-terminal domain LTQ54_RS21055 PF11398 Protein of unknown function (DUF2813) LTQ54_RS21060 PF06496 Protein of unknown function (DUF1097) LTQ54_RS21065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS21065 PF03466 LysR substrate binding domain LTQ54_RS21070 PF01226 Formate/nitrite transporter LTQ54_RS21075 PF04264 YceI-like domain LTQ54_RS21080 PF01292 Prokaryotic cytochrome b561 LTQ54_RS21095 PF00563 EAL domain LTQ54_RS21095 PF12792 CSS motif domain associated with EAL LTQ54_RS21100 PF00873 AcrB/AcrD/AcrF family LTQ54_RS21105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LTQ54_RS21105 PF00529 HlyD membrane-fusion protein of T1SS LTQ54_RS21110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LTQ54_RS21110 PF00529 HlyD membrane-fusion protein of T1SS LTQ54_RS21120 PF00271 Helicase conserved C-terminal domain LTQ54_RS21120 PF00270 DEAD/DEAH box helicase LTQ54_RS21125 PF04336 Acyl carrier protein phosphodiesterase LTQ54_RS21130 PF03222 Tryptophan/tyrosine permease family LTQ54_RS21135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS21140 PF13419 Haloacid dehalogenase-like hydrolase LTQ54_RS21145 PF11849 Domain of unknown function (DUF3369) LTQ54_RS21160 PF00294 pfkB family carbohydrate kinase LTQ54_RS21165 PF01268 Formate--tetrahydrofolate ligase LTQ54_RS21170 PF17158 Membrane-associated sensor, integral membrane domain LTQ54_RS21170 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS21175 PF13419 Haloacid dehalogenase-like hydrolase LTQ54_RS21180 PF00472 RF-1 domain LTQ54_RS21200 PF01571 Aminomethyltransferase folate-binding domain LTQ54_RS21200 PF08669 Glycine cleavage T-protein C-terminal barrel domain LTQ54_RS21210 PF00464 Serine hydroxymethyltransferase LTQ54_RS21215 PF01597 Glycine cleavage H-protein LTQ54_RS21220 PF02347 Glycine cleavage system P-protein LTQ54_RS21235 PF01554 MatE LTQ54_RS21245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS21245 PF00672 HAMP domain LTQ54_RS21245 PF02743 Cache domain LTQ54_RS21250 PF03466 LysR substrate binding domain LTQ54_RS21250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS21260 PF01810 LysE type translocator LTQ54_RS21275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LTQ54_RS21280 PF03413 Peptidase propeptide and YPEB domain LTQ54_RS21280 PF01447 Thermolysin metallopeptidase, catalytic domain LTQ54_RS21280 PF04151 Bacterial pre-peptidase C-terminal domain LTQ54_RS21280 PF02868 Thermolysin metallopeptidase, alpha-helical domain LTQ54_RS21280 PF07504 Fungalysin/Thermolysin Propeptide Motif LTQ54_RS21290 PF00579 tRNA synthetases class I (W and Y) LTQ54_RS21300 PF00291 Pyridoxal-phosphate dependent enzyme LTQ54_RS21305 PF07690 Major Facilitator Superfamily LTQ54_RS21315 PF01161 Phosphatidylethanolamine-binding protein LTQ54_RS21320 PF00989 PAS fold LTQ54_RS21320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS21320 PF00672 HAMP domain LTQ54_RS21320 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS21325 PF00072 Response regulator receiver domain LTQ54_RS21325 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS21340 PF03466 LysR substrate binding domain LTQ54_RS21340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS21345 PF13533 Biotin-lipoyl like LTQ54_RS21350 PF07690 Major Facilitator Superfamily LTQ54_RS21365 PF04542 Sigma-70 region 2 LTQ54_RS21365 PF04545 Sigma-70, region 4 LTQ54_RS21365 PF04539 Sigma-70 region 3 LTQ54_RS21365 PF00140 Sigma-70 factor, region 1.2 LTQ54_RS21385 PF13533 Biotin-lipoyl like LTQ54_RS21390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS21390 PF00072 Response regulator receiver domain LTQ54_RS21395 PF02321 Outer membrane efflux protein LTQ54_RS21400 PF00005 ABC transporter LTQ54_RS21400 PF00664 ABC transporter transmembrane region LTQ54_RS21405 PF00005 ABC transporter LTQ54_RS21415 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LTQ54_RS21415 PF00072 Response regulator receiver domain LTQ54_RS21415 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS21415 PF00672 HAMP domain LTQ54_RS21415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS21415 PF01627 Hpt domain LTQ54_RS21440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS21440 PF00672 HAMP domain LTQ54_RS21455 PF13186 Iron-sulfur cluster-binding domain LTQ54_RS21455 PF04055 Radical SAM superfamily LTQ54_RS21460 PF03781 Sulfatase-modifying factor enzyme 1 LTQ54_RS21470 PF13407 Periplasmic binding protein domain LTQ54_RS21480 PF00563 EAL domain LTQ54_RS21480 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS21480 PF03707 Bacterial signalling protein N terminal repeat LTQ54_RS21485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS21485 PF03466 LysR substrate binding domain LTQ54_RS21500 PF13519 von Willebrand factor type A domain LTQ54_RS21515 PF07726 ATPase family associated with various cellular activities (AAA) LTQ54_RS21515 PF17863 AAA lid domain LTQ54_RS21525 PF00884 Sulfatase LTQ54_RS21530 PF00884 Sulfatase LTQ54_RS21535 PF03150 Di-haem cytochrome c peroxidase LTQ54_RS21535 PF00034 Cytochrome c LTQ54_RS21545 PF01609 Transposase DDE domain LTQ54_RS21545 PF13006 Insertion element 4 transposase N-terminal LTQ54_RS21550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS21550 PF09308 LuxQ, periplasmic LTQ54_RS21550 PF00072 Response regulator receiver domain LTQ54_RS21550 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS21560 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LTQ54_RS21575 PF00962 Adenosine/AMP deaminase LTQ54_RS21580 PF00196 Bacterial regulatory proteins, luxR family LTQ54_RS21580 PF00072 Response regulator receiver domain LTQ54_RS21595 PF02469 Fasciclin domain LTQ54_RS21625 PF02567 Phenazine biosynthesis-like protein LTQ54_RS21630 PF01810 LysE type translocator LTQ54_RS21640 PF00563 EAL domain LTQ54_RS21640 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS21640 PF03707 Bacterial signalling protein N terminal repeat LTQ54_RS21660 PF00115 Cytochrome C and Quinol oxidase polypeptide I LTQ54_RS21670 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LTQ54_RS21670 PF00034 Cytochrome c LTQ54_RS21685 PF00561 alpha/beta hydrolase fold LTQ54_RS21700 PF02028 BCCT, betaine/carnitine/choline family transporter LTQ54_RS21710 PF00171 Aldehyde dehydrogenase family LTQ54_RS21720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS21720 PF03466 LysR substrate binding domain LTQ54_RS21730 PF00119 ATP synthase A chain LTQ54_RS21735 PF00137 ATP synthase subunit C LTQ54_RS21740 PF00430 ATP synthase B/B' CF(0) LTQ54_RS21745 PF00213 ATP synthase delta (OSCP) subunit LTQ54_RS21750 PF00306 ATP synthase alpha/beta chain, C terminal domain LTQ54_RS21750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LTQ54_RS21750 PF02874 ATP synthase alpha/beta family, beta-barrel domain LTQ54_RS21755 PF00231 ATP synthase LTQ54_RS21760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LTQ54_RS21760 PF02874 ATP synthase alpha/beta family, beta-barrel domain LTQ54_RS21765 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LTQ54_RS21765 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LTQ54_RS21775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS21775 PF03466 LysR substrate binding domain LTQ54_RS21785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS21785 PF09456 RcsC Alpha-Beta-Loop (ABL) LTQ54_RS21785 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS21785 PF00072 Response regulator receiver domain LTQ54_RS21790 PF00072 Response regulator receiver domain LTQ54_RS21790 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS21805 PF00005 ABC transporter LTQ54_RS21805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_RS21810 PF00005 ABC transporter LTQ54_RS21810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_RS21815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_RS21820 PF12911 N-terminal TM domain of oligopeptide transport permease C LTQ54_RS21820 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS21825 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS21830 PF00005 ABC transporter LTQ54_RS21830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_RS21835 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS21835 PF12911 N-terminal TM domain of oligopeptide transport permease C LTQ54_RS21840 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS21845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_RS21865 PF05025 RbsD / FucU transport protein family LTQ54_RS21870 PF00005 ABC transporter LTQ54_RS21875 PF02653 Branched-chain amino acid transport system / permease component LTQ54_RS21880 PF13407 Periplasmic binding protein domain LTQ54_RS21885 PF00294 pfkB family carbohydrate kinase LTQ54_RS21890 PF00356 Bacterial regulatory proteins, lacI family LTQ54_RS21895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS21895 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS21895 PF09308 LuxQ, periplasmic LTQ54_RS21895 PF00072 Response regulator receiver domain LTQ54_RS21915 PF03707 Bacterial signalling protein N terminal repeat LTQ54_RS21915 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS21915 PF00563 EAL domain LTQ54_RS21920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS21920 PF03466 LysR substrate binding domain LTQ54_RS21965 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LTQ54_RS21990 PF01548 Transposase LTQ54_RS21990 PF02371 Transposase IS116/IS110/IS902 family LTQ54_RS22010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LTQ54_RS22010 PF00384 Molybdopterin oxidoreductase LTQ54_RS22010 PF01568 Molydopterin dinucleotide binding domain LTQ54_RS22015 PF18267 Rubredoxin NAD+ reductase C-terminal domain LTQ54_RS22015 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_RS22015 PF04324 BFD-like [2Fe-2S] binding domain LTQ54_RS22015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LTQ54_RS22015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LTQ54_RS22025 PF07690 Major Facilitator Superfamily LTQ54_RS22030 PF03793 PASTA domain LTQ54_RS22030 PF00069 Protein kinase domain LTQ54_RS22035 PF00356 Bacterial regulatory proteins, lacI family LTQ54_RS22035 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LTQ54_RS22040 PF00381 PTS HPr component phosphorylation site LTQ54_RS22040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LTQ54_RS22045 PF00294 pfkB family carbohydrate kinase LTQ54_RS22050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LTQ54_RS22050 PF02378 Phosphotransferase system, EIIC LTQ54_RS22060 PF00873 AcrB/AcrD/AcrF family LTQ54_RS22080 PF04116 Fatty acid hydroxylase superfamily LTQ54_RS22085 PF00072 Response regulator receiver domain LTQ54_RS22085 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS22105 PF02798 Glutathione S-transferase, N-terminal domain LTQ54_RS22110 PF01844 HNH endonuclease LTQ54_RS22120 PF07690 Major Facilitator Superfamily LTQ54_RS22125 PF18081 Fanconi anemia-associated nuclease SAP domain LTQ54_RS22125 PF08774 VRR-NUC domain LTQ54_RS22155 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS22155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS22155 PF00672 HAMP domain LTQ54_RS22155 PF17149 Periplasmic sensor domain found in signal transduction proteins LTQ54_RS22155 PF00072 Response regulator receiver domain LTQ54_RS22155 PF01627 Hpt domain LTQ54_RS22165 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LTQ54_RS22170 PF02142 MGS-like domain LTQ54_RS22180 PF00580 UvrD/REP helicase N-terminal domain LTQ54_RS22180 PF13361 UvrD-like helicase C-terminal domain LTQ54_RS22180 PF12462 DNA helicase IV / RNA helicase N terminal LTQ54_RS22185 PF12805 FUSC-like inner membrane protein yccS LTQ54_RS22205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS22205 PF03466 LysR substrate binding domain LTQ54_RS22210 PF04055 Radical SAM superfamily LTQ54_RS22215 PF11230 Protein of unknown function (DUF3029) LTQ54_RS22225 PF03466 LysR substrate binding domain LTQ54_RS22225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS22240 PF00892 EamA-like transporter family LTQ54_RS22245 PF13419 Haloacid dehalogenase-like hydrolase LTQ54_RS22255 PF00465 Iron-containing alcohol dehydrogenase LTQ54_RS22275 PF02525 Flavodoxin-like fold LTQ54_RS22280 PF00999 Sodium/hydrogen exchanger family LTQ54_RS22280 PF02254 TrkA-N domain LTQ54_RS22300 PF13817 IS66 C-terminal element LTQ54_RS22300 PF13007 Transposase C of IS166 homeodomain LTQ54_RS22300 PF13005 zinc-finger binding domain of transposase IS66 LTQ54_RS22300 PF03050 Transposase IS66 family LTQ54_RS22325 PF03793 PASTA domain LTQ54_RS22325 PF00069 Protein kinase domain LTQ54_RS22335 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LTQ54_RS22370 PF08240 Alcohol dehydrogenase GroES-like domain LTQ54_RS22370 PF00107 Zinc-binding dehydrogenase LTQ54_RS22375 PF00155 Aminotransferase class I and II LTQ54_RS22380 PF00563 EAL domain LTQ54_RS22380 PF17153 Periplasmic sensor domain, extracellular LTQ54_RS22395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS22395 PF03466 LysR substrate binding domain LTQ54_RS22400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LTQ54_RS22425 PF01966 HD domain LTQ54_RS22435 PF03466 LysR substrate binding domain LTQ54_RS22435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS22440 PF01906 Putative heavy-metal-binding LTQ54_RS22445 PF08525 Opacity-associated protein A N-terminal motif LTQ54_RS22445 PF01476 LysM domain LTQ54_RS22445 PF01551 Peptidase family M23 LTQ54_RS22470 PF00005 ABC transporter LTQ54_RS22470 PF00664 ABC transporter transmembrane region LTQ54_RS22475 PF00664 ABC transporter transmembrane region LTQ54_RS22475 PF00005 ABC transporter LTQ54_RS22480 PF00133 tRNA synthetases class I (I, L, M and V) LTQ54_RS22480 PF08264 Anticodon-binding domain of tRNA LTQ54_RS22500 PF03315 Serine dehydratase beta chain LTQ54_RS22500 PF03313 Serine dehydratase alpha chain LTQ54_RS22505 PF00854 POT family LTQ54_RS22510 PF04954 Siderophore-interacting protein LTQ54_RS22510 PF08021 Siderophore-interacting FAD-binding domain LTQ54_RS22515 PF00356 Bacterial regulatory proteins, lacI family LTQ54_RS22515 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LTQ54_RS22520 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LTQ54_RS22520 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LTQ54_RS22525 PF01202 Shikimate kinase LTQ54_RS22530 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LTQ54_RS22540 PF03480 Bacterial extracellular solute-binding protein, family 7 LTQ54_RS22550 PF07702 UTRA domain LTQ54_RS22550 PF00392 Bacterial regulatory proteins, gntR family LTQ54_RS22555 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS22560 PF00005 ABC transporter LTQ54_RS22565 PF01266 FAD dependent oxidoreductase LTQ54_RS22575 PF00266 Aminotransferase class-V LTQ54_RS22580 PF00202 Aminotransferase class-III LTQ54_RS22585 PF13419 Haloacid dehalogenase-like hydrolase LTQ54_RS22590 PF13488 Glycine zipper LTQ54_RS22590 PF00691 OmpA family LTQ54_RS22595 PF02566 OsmC-like protein LTQ54_RS22600 PF01625 Peptide methionine sulfoxide reductase LTQ54_RS22600 PF01641 SelR domain LTQ54_RS22605 PF02386 Cation transport protein LTQ54_RS22610 PF02080 TrkA-C domain LTQ54_RS22610 PF02254 TrkA-N domain LTQ54_RS22615 PF00924 Mechanosensitive ion channel LTQ54_RS22620 PF00483 Nucleotidyl transferase LTQ54_RS22620 PF01050 Mannose-6-phosphate isomerase LTQ54_RS22625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LTQ54_RS22625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LTQ54_RS22625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LTQ54_RS22625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LTQ54_RS22630 PF00793 DAHP synthetase I family LTQ54_RS22635 PF12843 Putative quorum-sensing-regulated virulence factor LTQ54_RS22645 PF18416 N-acetylglucosamine binding protein domain 2 LTQ54_RS22645 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LTQ54_RS22650 PF01040 UbiA prenyltransferase family LTQ54_RS22655 PF02628 Cytochrome oxidase assembly protein LTQ54_RS22675 PF00510 Cytochrome c oxidase subunit III LTQ54_RS22680 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 LTQ54_RS22685 PF00115 Cytochrome C and Quinol oxidase polypeptide I LTQ54_RS22690 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LTQ54_RS22690 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LTQ54_RS22695 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LTQ54_RS22695 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LTQ54_RS22695 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LTQ54_RS22695 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LTQ54_RS22700 PF01810 LysE type translocator LTQ54_RS22705 PF01557 Fumarylacetoacetate (FAA) hydrolase family LTQ54_RS22715 PF00012 Hsp70 protein LTQ54_RS22735 PF09308 LuxQ, periplasmic LTQ54_RS22735 PF00072 Response regulator receiver domain LTQ54_RS22735 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS22735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS22740 PF13407 Periplasmic binding protein domain LTQ54_RS22745 PF01541 GIY-YIG catalytic domain LTQ54_RS22750 PF04337 Protein of unknown function, DUF480 LTQ54_RS22760 PF04363 Protein of unknown function (DUF496) LTQ54_RS22775 PF00672 HAMP domain LTQ54_RS22775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS22775 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS22775 PF01627 Hpt domain LTQ54_RS22775 PF00072 Response regulator receiver domain LTQ54_RS22775 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LTQ54_RS22780 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LTQ54_RS22780 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LTQ54_RS22785 PF00175 Oxidoreductase NAD-binding domain LTQ54_RS22785 PF00970 Oxidoreductase FAD-binding domain LTQ54_RS22785 PF00111 2Fe-2S iron-sulfur cluster binding domain LTQ54_RS22790 PF03063 Prismane/CO dehydrogenase family LTQ54_RS22805 PF01810 LysE type translocator LTQ54_RS22810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS22810 PF03466 LysR substrate binding domain LTQ54_RS22820 PF13520 Amino acid permease LTQ54_RS22825 PF00155 Aminotransferase class I and II LTQ54_RS22825 PF00392 Bacterial regulatory proteins, gntR family LTQ54_RS22835 PF03253 Urea transporter LTQ54_RS22840 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LTQ54_RS22840 PF12833 Helix-turn-helix domain LTQ54_RS22855 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LTQ54_RS22860 PF07969 Amidohydrolase family LTQ54_RS22865 PF00313 'Cold-shock' DNA-binding domain LTQ54_RS22870 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS22885 PF00271 Helicase conserved C-terminal domain LTQ54_RS22885 PF00270 DEAD/DEAH box helicase LTQ54_RS22890 PF00563 EAL domain LTQ54_RS22890 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS22890 PF03707 Bacterial signalling protein N terminal repeat LTQ54_RS22905 PF00672 HAMP domain LTQ54_RS22905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS22905 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS22910 PF00072 Response regulator receiver domain LTQ54_RS22910 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS22915 PF00873 AcrB/AcrD/AcrF family LTQ54_RS22925 PF02321 Outer membrane efflux protein LTQ54_RS22935 PF07670 Nucleoside recognition LTQ54_RS22935 PF07662 Na+ dependent nucleoside transporter C-terminus LTQ54_RS22935 PF01773 Na+ dependent nucleoside transporter N-terminus LTQ54_RS22945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LTQ54_RS22950 PF03611 PTS system sugar-specific permease component LTQ54_RS22955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LTQ54_RS22960 PF01966 HD domain LTQ54_RS22965 PF13302 Acetyltransferase (GNAT) domain LTQ54_RS22970 PF16527 Two-component sensor protein CpxA, periplasmic domain LTQ54_RS22970 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS22970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS22970 PF00672 HAMP domain LTQ54_RS22975 PF00072 Response regulator receiver domain LTQ54_RS22975 PF00486 Transcriptional regulatory protein, C terminal LTQ54_RS22980 PF13426 PAS domain LTQ54_RS22980 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS22980 PF00563 EAL domain LTQ54_RS22990 PF08447 PAS fold LTQ54_RS22990 PF08448 PAS fold LTQ54_RS22990 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS22990 PF00563 EAL domain LTQ54_RS23000 PF00005 ABC transporter LTQ54_RS23020 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LTQ54_RS23020 PF01872 RibD C-terminal domain LTQ54_RS23030 PF00849 RNA pseudouridylate synthase LTQ54_RS23040 PF07690 Major Facilitator Superfamily LTQ54_RS23050 PF12833 Helix-turn-helix domain LTQ54_RS23055 PF02311 AraC-like ligand binding domain LTQ54_RS23055 PF12833 Helix-turn-helix domain LTQ54_RS23070 PF01274 Malate synthase LTQ54_RS23075 PF03466 LysR substrate binding domain LTQ54_RS23075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS23080 PF00463 Isocitrate lyase family LTQ54_RS23095 PF01752 Collagenase LTQ54_RS23095 PF08453 Peptidase family M9 N-terminal LTQ54_RS23095 PF04151 Bacterial pre-peptidase C-terminal domain LTQ54_RS23100 PF17327 Acyl homoserine lactone synthase LTQ54_RS23105 PF00072 Response regulator receiver domain LTQ54_RS23105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS23110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS23110 PF03466 LysR substrate binding domain LTQ54_RS23150 PF00072 Response regulator receiver domain LTQ54_RS23150 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS23165 PF01032 FecCD transport family LTQ54_RS23175 PF00005 ABC transporter LTQ54_RS23180 PF00149 Calcineurin-like phosphoesterase LTQ54_RS23180 PF02872 5'-nucleotidase, C-terminal domain LTQ54_RS23185 PF00465 Iron-containing alcohol dehydrogenase LTQ54_RS23190 PF00596 Class II Aldolase and Adducin N-terminal domain LTQ54_RS23195 PF05025 RbsD / FucU transport protein family LTQ54_RS23200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LTQ54_RS23200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LTQ54_RS23205 PF02952 L-fucose isomerase, C-terminal domain LTQ54_RS23205 PF07881 L-fucose isomerase, first N-terminal domain LTQ54_RS23205 PF07882 L-fucose isomerase, second N-terminal domain LTQ54_RS23210 PF07690 Major Facilitator Superfamily LTQ54_RS23215 PF00455 DeoR C terminal sensor domain LTQ54_RS23215 PF08220 DeoR-like helix-turn-helix domain LTQ54_RS23220 PF00005 ABC transporter LTQ54_RS23225 PF12704 MacB-like periplasmic core domain LTQ54_RS23225 PF02687 FtsX-like permease family LTQ54_RS23235 PF04231 Endonuclease I LTQ54_RS23245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS23245 PF03466 LysR substrate binding domain LTQ54_RS23260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_RS23275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_RS23275 PF12793 Sugar transport-related sRNA regulator N-term LTQ54_RS23285 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS23290 PF14785 Maltose transport system permease protein MalF P2 domain LTQ54_RS23290 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS23295 PF01547 Bacterial extracellular solute-binding protein LTQ54_RS23300 PF08402 TOBE domain LTQ54_RS23300 PF00005 ABC transporter LTQ54_RS23310 PF02743 Cache domain LTQ54_RS23310 PF00672 HAMP domain LTQ54_RS23310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS23315 PF17863 AAA lid domain LTQ54_RS23315 PF07726 ATPase family associated with various cellular activities (AAA) LTQ54_RS23320 PF01882 Protein of unknown function DUF58 LTQ54_RS23330 PF07584 Aerotolerance regulator N-terminal LTQ54_RS23330 PF00092 von Willebrand factor type A domain LTQ54_RS23335 PF07584 Aerotolerance regulator N-terminal LTQ54_RS23335 PF00092 von Willebrand factor type A domain LTQ54_RS23345 PF17151 Periplasmic sensor domain LTQ54_RS23345 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS23350 PF00005 ABC transporter LTQ54_RS23355 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS23360 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_RS23365 PF12849 PBP superfamily domain LTQ54_RS23370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_RS23370 PF17200 Single Cache domain 2 LTQ54_RS23370 PF00672 HAMP domain LTQ54_RS23390 PF07715 TonB-dependent Receptor Plug Domain LTQ54_RS23390 PF00593 TonB dependent receptor LTQ54_RS23395 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LTQ54_RS23395 PF00326 Prolyl oligopeptidase family LTQ54_RS23400 PF03280 Proteobacterial lipase chaperone protein LTQ54_RS23405 PF00561 alpha/beta hydrolase fold LTQ54_RS23410 PF00657 GDSL-like Lipase/Acylhydrolase LTQ54_RS23415 PF00271 Helicase conserved C-terminal domain LTQ54_RS23415 PF00270 DEAD/DEAH box helicase LTQ54_RS23425 PF17969 L,D-transpeptidase C-terminal domain LTQ54_RS23425 PF03734 L,D-transpeptidase catalytic domain LTQ54_RS23425 PF01476 LysM domain LTQ54_RS23430 PF01048 Phosphorylase superfamily LTQ54_RS23445 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_RS23455 PF11742 Protein of unknown function (DUF3302) LTQ54_RS23460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LTQ54_RS23460 PF00529 HlyD membrane-fusion protein of T1SS LTQ54_RS23465 PF07155 ECF-type riboflavin transporter, S component LTQ54_RS23470 PF12558 ATP-binding cassette cobalt transporter LTQ54_RS23470 PF00005 ABC transporter LTQ54_RS23485 PF02806 Alpha amylase, C-terminal all-beta domain LTQ54_RS23485 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LTQ54_RS23485 PF00128 Alpha amylase, catalytic domain LTQ54_RS23490 PF02446 4-alpha-glucanotransferase LTQ54_RS23495 PF00343 Carbohydrate phosphorylase LTQ54_RS23500 PF17874 MalT-like TPR region LTQ54_RS23500 PF00196 Bacterial regulatory proteins, luxR family LTQ54_RS23515 PF02630 SCO1/SenC LTQ54_RS23525 PF03193 RsgA GTPase LTQ54_RS23530 PF00375 Sodium:dicarboxylate symporter family LTQ54_RS23540 PF00196 Bacterial regulatory proteins, luxR family LTQ54_RS23540 PF00072 Response regulator receiver domain LTQ54_RS23545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_RS23545 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_RS23550 PF13247 4Fe-4S dicluster domain LTQ54_RS23555 PF03916 Polysulphide reductase, NrfD LTQ54_RS23560 PF01568 Molydopterin dinucleotide binding domain LTQ54_RS23560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LTQ54_RS23560 PF00384 Molybdopterin oxidoreductase LTQ54_RS23570 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LTQ54_RS23575 PF02028 BCCT, betaine/carnitine/choline family transporter LTQ54_RS23580 PF13378 Enolase C-terminal domain-like LTQ54_RS23580 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LTQ54_RS23585 PF00890 FAD binding domain LTQ54_RS23585 PF04205 FMN-binding domain LTQ54_RS23590 PF00392 Bacterial regulatory proteins, gntR family LTQ54_RS23590 PF07729 FCD domain LTQ54_RS23595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS23595 PF03466 LysR substrate binding domain LTQ54_RS23600 PF01037 Lrp/AsnC ligand binding domain LTQ54_RS23605 PF01810 LysE type translocator LTQ54_RS23615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LTQ54_RS23615 PF17999 Pullulanase N1-terminal domain LTQ54_RS23615 PF00128 Alpha amylase, catalytic domain LTQ54_RS23620 PF17967 Pullulanase N2 domain LTQ54_RS23620 PF18494 Pullulanase Ins domain LTQ54_RS23620 PF03714 Bacterial pullanase-associated domain LTQ54_RS23620 PF11852 Domain of unknown function (DUF3372) LTQ54_RS23620 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LTQ54_RS23630 PF02264 LamB porin LTQ54_RS23635 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LTQ54_RS23635 PF00128 Alpha amylase, catalytic domain LTQ54_RS23650 PF01553 Acyltransferase LTQ54_RS23655 PF00970 Oxidoreductase FAD-binding domain LTQ54_RS23655 PF00175 Oxidoreductase NAD-binding domain LTQ54_RS23665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LTQ54_RS23665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LTQ54_RS23670 PF01734 Patatin-like phospholipase LTQ54_RS23675 PF00199 Catalase LTQ54_RS23675 PF06628 Catalase-related immune-responsive LTQ54_RS23680 PF02595 Glycerate kinase family LTQ54_RS23690 PF01261 Xylose isomerase-like TIM barrel LTQ54_RS23695 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LTQ54_RS23705 PF00596 Class II Aldolase and Adducin N-terminal domain LTQ54_RS23710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LTQ54_RS23715 PF03611 PTS system sugar-specific permease component LTQ54_RS23720 PF08220 DeoR-like helix-turn-helix domain LTQ54_RS23720 PF00455 DeoR C terminal sensor domain LTQ54_RS23745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LTQ54_RS23745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LTQ54_RS23755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS23755 PF03466 LysR substrate binding domain LTQ54_RS23780 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 LTQ54_RS23780 PF00535 Glycosyl transferase family 2 LTQ54_RS23785 PF01852 START domain LTQ54_RS23790 PF00440 Bacterial regulatory proteins, tetR family LTQ54_RS23805 PF01758 Sodium Bile acid symporter family LTQ54_RS23810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS23810 PF03466 LysR substrate binding domain LTQ54_RS23820 PF07634 RtxA repeat LTQ54_RS23820 PF16671 Actin cross-linking domain LTQ54_RS23820 PF12146 Serine aminopeptidase, S33 LTQ54_RS23820 PF11647 Membrane Localization Domain LTQ54_RS23820 PF11713 Peptidase C80 family LTQ54_RS23825 PF02794 RTX toxin acyltransferase family LTQ54_RS23835 PF03412 Peptidase C39 family LTQ54_RS23835 PF00005 ABC transporter LTQ54_RS23835 PF00664 ABC transporter transmembrane region LTQ54_RS23845 PF03412 Peptidase C39 family LTQ54_RS23845 PF00005 ABC transporter LTQ54_RS23845 PF00664 ABC transporter transmembrane region LTQ54_RS23850 PF00230 Major intrinsic protein LTQ54_RS23855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LTQ54_RS23855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LTQ54_RS23860 PF08220 DeoR-like helix-turn-helix domain LTQ54_RS23860 PF00455 DeoR C terminal sensor domain LTQ54_RS23865 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LTQ54_RS23865 PF01266 FAD dependent oxidoreductase LTQ54_RS23870 PF00106 short chain dehydrogenase LTQ54_RS23875 PF03466 LysR substrate binding domain LTQ54_RS23875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS23885 PF01177 Asp/Glu/Hydantoin racemase LTQ54_RS23895 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_RS23895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LTQ54_RS23900 PF00881 Nitroreductase family LTQ54_RS23905 PF13091 PLD-like domain LTQ54_RS23920 PF03466 LysR substrate binding domain LTQ54_RS23920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS23925 PF07690 Major Facilitator Superfamily LTQ54_RS23930 PF12464 Maltose acetyltransferase LTQ54_RS23930 PF14602 Hexapeptide repeat of succinyl-transferase LTQ54_RS23935 PF00356 Bacterial regulatory proteins, lacI family LTQ54_RS23940 PF00232 Glycosyl hydrolase family 1 LTQ54_RS23975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS23975 PF03466 LysR substrate binding domain LTQ54_RS23980 PF14864 Alkyl sulfatase C-terminal LTQ54_RS23980 PF14863 Alkyl sulfatase dimerisation LTQ54_RS23980 PF00753 Metallo-beta-lactamase superfamily LTQ54_RS23985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_RS23985 PF03466 LysR substrate binding domain LTQ54_RS23990 PF01554 MatE LTQ54_RS23995 PF00378 Enoyl-CoA hydratase/isomerase LTQ54_RS24000 PF00106 short chain dehydrogenase LTQ54_RS24020 PF01980 tRNA-methyltransferase O