locus-tag	class	description
LTQ02_RS00035	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
LTQ02_RS00045	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LTQ02_RS00050	COG0826	peptidase U32
LTQ02_RS00055	COG2974	May be involved in recombination
LTQ02_RS00060	COG0745	RESPONSE REGULATOR receiver
LTQ02_RS00065	COG5002	protein histidine kinase activity
LTQ02_RS00075	COG0248	Ppx GppA phosphatase
LTQ02_RS00080	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LTQ02_RS00085	COG0573	inorganic phosphate transmembrane transporter activity
LTQ02_RS00090	COG0581	inorganic phosphate transmembrane transporter activity
LTQ02_RS00095	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
LTQ02_RS00100	COG0704	Plays a role in the regulation of phosphate uptake
LTQ02_RS00120	COG3142	Participates in the control of copper homeostasis
LTQ02_RS00125	COG0450	alkyl hydroperoxide reductase
LTQ02_RS00130	COG0583	DNA-binding transcription factor activity
LTQ02_RS00150	COG0517	IMP dehydrogenase activity
LTQ02_RS00155	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
LTQ02_RS00160	COG0343	queuine tRNA-ribosyltransferase activity
LTQ02_RS00165	COG1862	Preprotein translocase
LTQ02_RS00170	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LTQ02_RS00175	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LTQ02_RS00180	COG0483	inositol monophosphate 1-phosphatase activity
LTQ02_RS00185	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
LTQ02_RS00190	COG1959	2 iron, 2 sulfur cluster binding
LTQ02_RS00195	COG1104	cysteine desulfurase activity
LTQ02_RS00200	COG0822	iron-sulfur transferase activity
LTQ02_RS00210	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
LTQ02_RS00215	COG0443	Heat shock 70 kDa protein
LTQ02_RS00225	COG2975	iron-sulfur cluster assembly
LTQ02_RS00230	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LTQ02_RS00235	COG0105	UTP biosynthetic process
LTQ02_RS00240	COG0820	rRNA (adenine-C2-)-methyltransferase activity
LTQ02_RS00245	COG1426	Protein conserved in bacteria
LTQ02_RS00250	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
LTQ02_RS00255	COG0124	histidyl-tRNA synthetase
LTQ02_RS00260	COG2976	Protein conserved in bacteria
LTQ02_RS00265	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LTQ02_RS00270	COG1160	GTP binding
LTQ02_RS00280	COG3706	GGDEF domain
LTQ02_RS00320	COG0831	urea catabolic process
LTQ02_RS00325	COG0832	Belongs to the urease beta subunit family
LTQ02_RS00330	COG0804	urea catabolic process
LTQ02_RS00335	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
LTQ02_RS00350	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
LTQ02_RS00355	COG1570	exodeoxyribonuclease VII activity
LTQ02_RS00360	COG0516	GMP reductase activity
LTQ02_RS00360	COG0517	IMP dehydrogenase activity
LTQ02_RS00365	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LTQ02_RS00365	COG0519	Catalyzes the synthesis of GMP from XMP
LTQ02_RS00380	COG1584	GPR1 FUN34 yaaH family protein
LTQ02_RS00385	COG1115	amino acid carrier protein
LTQ02_RS00395	COG0204	Acyl-transferase
LTQ02_RS00415	COG0189	ligase activity
LTQ02_RS00415	COG4067	protein conserved in archaea
LTQ02_RS00430	COG2867	negative regulation of translational initiation
LTQ02_RS00435	COG2914	Belongs to the UPF0125 (RnfH) family
LTQ02_RS00445	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LTQ02_RS00450	COG0497	DNA recombination
LTQ02_RS00455	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LTQ02_RS00460	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LTQ02_RS00480	COG0484	heat shock protein binding
LTQ02_RS00510	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
LTQ02_RS00515	COG1253	flavin adenine dinucleotide binding
LTQ02_RS00530	COG0047	phosphoribosylformylglycinamidine synthase activity
LTQ02_RS00530	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LTQ02_RS00540	COG2171	N-acyltransferase activity
LTQ02_RS00545	COG0737	Belongs to the 5'-nucleotidase family
LTQ02_RS00550	COG2095	MarC family integral membrane protein
LTQ02_RS00565	COG3141	response to X-ray
LTQ02_RS00570	COG0583	DNA-binding transcription factor activity
LTQ02_RS00605	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
LTQ02_RS00605	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LTQ02_RS00615	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
LTQ02_RS00620	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LTQ02_RS00625	COG2166	iron-sulfur cluster assembly
LTQ02_RS00630	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LTQ02_RS00635	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LTQ02_RS00650	COG2211	Major facilitator Superfamily
LTQ02_RS00655	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LTQ02_RS00665	COG2813	Specifically methylates the guanine in position
LTQ02_RS00670	COG0271	Belongs to the BolA IbaG family
LTQ02_RS00675	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LTQ02_RS00680	COG1805	sodium ion transport
LTQ02_RS00690	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LTQ02_RS00695	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LTQ02_RS00700	COG2871	sodium ion transport
LTQ02_RS00705	COG1477	protein flavinylation
LTQ02_RS00710	COG2991	Protein conserved in bacteria
LTQ02_RS00720	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LTQ02_RS00740	COG0733	neurotransmitter:sodium symporter activity
LTQ02_RS00745	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LTQ02_RS00750	COG0321	lipoyl(octanoyl) transferase activity
LTQ02_RS00760	COG1686	Belongs to the peptidase S11 family
LTQ02_RS00765	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LTQ02_RS00770	COG0772	Belongs to the SEDS family
LTQ02_RS00775	COG0768	penicillin binding
LTQ02_RS00780	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LTQ02_RS00785	COG0799	negative regulation of ribosome biogenesis
LTQ02_RS00790	COG1466	dna polymerase III delta subunit
LTQ02_RS00795	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
LTQ02_RS00800	COG0495	leucyl-tRNA aminoacylation
LTQ02_RS00805	COG2888	peptidyl-tyrosine sulfation
LTQ02_RS00810	COG0815	Transfers the fatty acyl group on membrane lipoproteins
LTQ02_RS00815	COG4535	Mg2 and Co2 transporter CorC
LTQ02_RS00820	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LTQ02_RS00825	COG1702	phosphate starvation-inducible protein PhoH
LTQ02_RS00835	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LTQ02_RS00840	COG2706	6-phosphogluconolactonase activity
LTQ02_RS00945	COG0193	aminoacyl-tRNA hydrolase activity
LTQ02_RS00950	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LTQ02_RS00960	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
LTQ02_RS00965	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
LTQ02_RS00970	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LTQ02_RS00975	COG2890	protein-(glutamine-N5) methyltransferase activity
LTQ02_RS00980	COG3094	Invasion gene expression up-regulator, SirB
LTQ02_RS00985	COG2912	Transglutaminase-like superfamily
LTQ02_RS00990	COG2877	3-deoxy-8-phosphooctulonate synthase activity
LTQ02_RS01000	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LTQ02_RS01005	COG1187	pseudouridine synthase activity
LTQ02_RS01010	COG2840	Smr protein MutS2
LTQ02_RS01050	COG2608	mercury ion transmembrane transporter activity
LTQ02_RS01050	COG2217	Heavy metal translocating P-type atpase
LTQ02_RS01065	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ02_RS01100	COG2986	histidine ammonia-lyase
LTQ02_RS01105	COG1216	Glycosyl transferase, family 2
LTQ02_RS01125	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LTQ02_RS01130	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LTQ02_RS01190	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
LTQ02_RS01195	COG0835	chemotaxis
LTQ02_RS01195	COG0784	Response regulator, receiver
LTQ02_RS01200	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LTQ02_RS01205	COG1815	bacterial-type flagellum-dependent cell motility
LTQ02_RS01210	COG1558	bacterial-type flagellum-dependent cell motility
LTQ02_RS01220	COG1749	Flagellar hook protein flgE
LTQ02_RS01225	COG4787	bacterial-type flagellum-dependent cell motility
LTQ02_RS01235	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
LTQ02_RS01240	COG1706	bacterial-type flagellum-dependent cell motility
LTQ02_RS01245	COG1705	Flagellar rod assembly protein muramidase FlgJ
LTQ02_RS01245	COG3951	Flagellar rod assembly protein muramidase FlgJ
LTQ02_RS01265	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LTQ02_RS01270	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LTQ02_RS01280	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
LTQ02_RS01290	COG1516	flagellar protein fliS
LTQ02_RS01310	COG1677	Flagellar hook-basal body complex protein FliE
LTQ02_RS01320	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LTQ02_RS01370	COG1987	bacterial-type flagellum assembly
LTQ02_RS01375	COG1684	flagellar biosynthetic protein fliR
LTQ02_RS01410	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
LTQ02_RS01415	COG2198	Histidine kinase
LTQ02_RS01415	COG0784	Response regulator, receiver
LTQ02_RS01415	COG0643	Histidine kinase
LTQ02_RS01420	COG2201	protein-glutamate methylesterase activity
LTQ02_RS01425	COG1192	Involved in chromosome partitioning
LTQ02_RS01435	COG0835	chemotaxis
LTQ02_RS01445	COG4133	protoheme IX ABC transporter activity
LTQ02_RS01450	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LTQ02_RS01455	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LTQ02_RS01460	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LTQ02_RS01465	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
LTQ02_RS01470	COG1138	Cytochrome C-type biogenesis protein
LTQ02_RS01475	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LTQ02_RS01485	COG4235	cytochrome complex assembly
LTQ02_RS01485	COG3088	subunit of a heme lyase
LTQ02_RS01500	COG2067	long-chain fatty acid transport protein
LTQ02_RS01515	COG0183	Belongs to the thiolase family
LTQ02_RS01520	COG1250	3-hydroxyacyl-CoA dehydrogenase
LTQ02_RS01520	COG1024	Enoyl-CoA hydratase
LTQ02_RS01530	COG2062	phosphohistidine phosphatase, SixA
LTQ02_RS01535	COG2840	Smr protein MutS2
LTQ02_RS01540	COG2890	protein-(glutamine-N5) methyltransferase activity
LTQ02_RS01545	COG1280	lysine exporter protein (LysE YggA)
LTQ02_RS01550	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
LTQ02_RS01570	COG1175	transmembrane transport
LTQ02_RS01580	COG3842	ATPase activity
LTQ02_RS01585	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LTQ02_RS01590	COG2070	2-Nitropropane dioxygenase
LTQ02_RS01590	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
LTQ02_RS01605	COG3321	synthase
LTQ02_RS01605	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LTQ02_RS01620	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
LTQ02_RS01625	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
LTQ02_RS01630	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
LTQ02_RS01640	COG2204	response regulator
LTQ02_RS01650	COG0544	peptidyl-prolyl cis-trans isomerase activity
LTQ02_RS01655	COG0740	serine-type endopeptidase activity
LTQ02_RS01660	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LTQ02_RS01665	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LTQ02_RS01670	COG0776	regulation of translation
LTQ02_RS01675	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LTQ02_RS01680	COG1555	photosystem II stabilization
LTQ02_RS01695	COG0232	Belongs to the dGTPase family. Type 2 subfamily
LTQ02_RS01700	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
LTQ02_RS01705	COG0436	Aminotransferase
LTQ02_RS01710	COG1169	isochorismate synthase
LTQ02_RS01715	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
LTQ02_RS01720	COG2267	carboxylic ester hydrolase activity
LTQ02_RS01725	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
LTQ02_RS01745	COG2855	membrane
LTQ02_RS01765	COG0813	purine-nucleoside phosphorylase activity
LTQ02_RS01820	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LTQ02_RS01835	COG1522	sequence-specific DNA binding
LTQ02_RS01845	COG1946	Acyl-CoA thioesterase
LTQ02_RS01910	COG3341	Caulimovirus viroplasmin
LTQ02_RS01910	COG0328	RNA-DNA hybrid ribonuclease activity
LTQ02_RS01915	COG0438	transferase activity, transferring glycosyl groups
LTQ02_RS01920	COG0463	Glycosyl transferase, family 2
LTQ02_RS01920	COG1216	Glycosyl transferase, family 2
LTQ02_RS01960	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
LTQ02_RS01985	COG0069	glutamate synthase activity
LTQ02_RS02000	COG0583	DNA-binding transcription factor activity
LTQ02_RS02005	COG0789	Transcriptional regulator
LTQ02_RS02015	COG1486	melibiose metabolic process
LTQ02_RS02020	COG0583	DNA-binding transcription factor activity
LTQ02_RS02045	COG3119	arylsulfatase activity
LTQ02_RS02050	COG1609	Transcriptional regulator
LTQ02_RS02065	COG2814	Major facilitator Superfamily
LTQ02_RS02075	COG1760	l-serine dehydratase
LTQ02_RS02080	COG1522	sequence-specific DNA binding
LTQ02_RS02085	COG1280	lysine exporter protein (LysE YggA)
LTQ02_RS02105	COG2233	PERMEase
LTQ02_RS02110	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LTQ02_RS02115	COG1227	inorganic diphosphatase activity
LTQ02_RS02150	COG0583	DNA-binding transcription factor activity
LTQ02_RS02160	COG0697	spore germination
LTQ02_RS02165	COG2207	Transcriptional regulator
LTQ02_RS02185	COG4232	protein-disulfide reductase activity
LTQ02_RS02190	COG3118	belongs to the thioredoxin family
LTQ02_RS02200	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
LTQ02_RS02240	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LTQ02_RS02245	COG1120	ATPase activity
LTQ02_RS02255	COG1228	amidohydrolase
LTQ02_RS02270	COG3040	lipid binding
LTQ02_RS02285	COG0583	DNA-binding transcription factor activity
LTQ02_RS02290	COG1309	transcriptional regulator
LTQ02_RS02300	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LTQ02_RS02305	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LTQ02_RS02315	COG1845	cytochrome c oxidase, subunit III
LTQ02_RS02320	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
LTQ02_RS02335	COG2015	COG2015, Alkyl sulfatase and related hydrolases
LTQ02_RS02355	COG0583	DNA-binding transcription factor activity
LTQ02_RS02360	COG0346	lactoylglutathione lyase activity
LTQ02_RS02365	COG1902	pentaerythritol trinitrate reductase activity
LTQ02_RS02390	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LTQ02_RS02395	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LTQ02_RS02425	COG0617	tRNA 3'-terminal CCA addition
LTQ02_RS02425	COG0517	IMP dehydrogenase activity
LTQ02_RS02425	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
LTQ02_RS02455	COG0537	adenosine 5'-monophosphoramidase activity
LTQ02_RS02480	COG3150	esterase
LTQ02_RS02485	COG1252	NADH dehydrogenase
LTQ02_RS02500	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LTQ02_RS02510	COG4591	ABC-type transport system involved in lipoprotein release permease component
LTQ02_RS02515	COG1136	(ABC) transporter
LTQ02_RS02520	COG4591	ABC-type transport system involved in lipoprotein release permease component
LTQ02_RS02530	COG0658	competence protein
LTQ02_RS02530	COG2333	competence protein COMEC
LTQ02_RS02535	COG1132	(ABC) transporter
LTQ02_RS02540	COG1663	tetraacyldisaccharide 4'-kinase activity
LTQ02_RS02545	COG2835	tetraacyldisaccharide 4'-kinase activity
LTQ02_RS02550	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
LTQ02_RS02555	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
LTQ02_RS02560	COG0539	negative regulation of cytoplasmic translation
LTQ02_RS02565	COG0776	regulation of translation
LTQ02_RS02570	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
LTQ02_RS02575	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
LTQ02_RS02580	COG0284	orotidine-5'-phosphate decarboxylase activity
LTQ02_RS02595	COG0583	DNA-binding transcription factor activity
LTQ02_RS02605	COG0686	Belongs to the AlaDH PNT family
LTQ02_RS02610	COG1522	sequence-specific DNA binding
LTQ02_RS02615	COG1674	ftsk spoiiie
LTQ02_RS02620	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
LTQ02_RS02625	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LTQ02_RS02630	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LTQ02_RS02635	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LTQ02_RS02640	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LTQ02_RS02645	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
LTQ02_RS02650	COG0156	8-amino-7-oxononanoate synthase activity
LTQ02_RS02670	COG0501	Belongs to the peptidase M48B family
LTQ02_RS02675	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LTQ02_RS02680	COG2915	High frequency lysogenization protein hflD homolog
LTQ02_RS02695	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LTQ02_RS02700	COG2916	Histone family protein nucleoid-structuring protein H-NS
LTQ02_RS02705	COG1757	Na H antiporter
LTQ02_RS02720	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LTQ02_RS02725	COG0131	Imidazoleglycerol-phosphate dehydratase
LTQ02_RS02725	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LTQ02_RS02730	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LTQ02_RS02735	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LTQ02_RS02825	COG0210	DNA helicase
LTQ02_RS02875	COG0107	imidazoleglycerol-phosphate synthase activity
LTQ02_RS02880	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LTQ02_RS02880	COG0140	phosphoribosyl-ATP diphosphatase activity
LTQ02_RS02885	COG3012	SEC-C Motif Domain Protein
LTQ02_RS02890	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
LTQ02_RS02895	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LTQ02_RS02900	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LTQ02_RS02905	COG0215	cysteine-tRNA ligase activity
LTQ02_RS02935	COG2116	formate transmembrane transporter activity
LTQ02_RS02940	COG0390	transport system, permease component
LTQ02_RS02945	COG4459	periplasmic nitrate reductase
LTQ02_RS02950	COG3005	denitrification pathway
LTQ02_RS02955	COG0243	molybdopterin cofactor binding
LTQ02_RS02965	COG1227	inorganic diphosphatase activity
LTQ02_RS02980	COG4172	Belongs to the ABC transporter superfamily
LTQ02_RS02995	COG4168	peptide transport system, permease
LTQ02_RS03000	COG4166	transmembrane transport
LTQ02_RS03005	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
LTQ02_RS03010	COG1842	Phage shock protein A
LTQ02_RS03020	COG1983	PspC domain protein
LTQ02_RS03040	COG2818	Glycosylase
LTQ02_RS03055	COG0626	cystathionine gamma-synthase activity
LTQ02_RS03065	COG0733	neurotransmitter:sodium symporter activity
LTQ02_RS03075	COG0564	pseudouridine synthase activity
LTQ02_RS03080	COG0116	Belongs to the methyltransferase superfamily
LTQ02_RS03080	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LTQ02_RS03085	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LTQ02_RS03090	COG4136	ATPase activity
LTQ02_RS03095	COG4135	transport system, permease component
LTQ02_RS03110	COG3313	Fe-S protein
LTQ02_RS03135	COG1280	lysine exporter protein (LysE YggA)
LTQ02_RS03145	COG2866	Carboxypeptidase
LTQ02_RS03170	COG4176	ABC-type proline glycine betaine transport system permease component
LTQ02_RS03175	COG2113	Glycine betaine
LTQ02_RS03185	COG0583	DNA-binding transcription factor activity
LTQ02_RS03195	COG2995	paraquat-inducible protein a
LTQ02_RS03200	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LTQ02_RS03200	COG3008	intermembrane lipid transfer
LTQ02_RS03245	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LTQ02_RS03270	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
LTQ02_RS03280	COG0586	Pfam SNARE associated Golgi protein
LTQ02_RS03295	COG0848	biopolymer transport protein
LTQ02_RS03300	COG0811	peptide transport
LTQ02_RS03315	COG4771	TonB-dependent receptor
LTQ02_RS03320	COG4178	(ABC) transporter
LTQ02_RS03325	COG0612	Peptidase, M16
LTQ02_RS03335	COG0642	Histidine kinase
LTQ02_RS03350	COG1061	Type III restriction enzyme res subunit
LTQ02_RS03360	COG2814	Major facilitator Superfamily
LTQ02_RS03370	COG0702	epimerase
LTQ02_RS03375	COG0534	Mate efflux family protein
LTQ02_RS03380	COG1136	(ABC) transporter
LTQ02_RS03395	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LTQ02_RS03420	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
LTQ02_RS03425	COG3273	potassium ion transport
LTQ02_RS03425	COG2985	domain, Protein
LTQ02_RS03430	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LTQ02_RS03440	COG1737	Transcriptional regulator
LTQ02_RS03445	COG0076	glutamate decarboxylase activity
LTQ02_RS03455	COG2431	L-lysine efflux transmembrane transporter activity
LTQ02_RS03465	COG3070	regulator of competence-specific genes
LTQ02_RS03475	COG2204	response regulator
LTQ02_RS03480	COG3852	Histidine kinase
LTQ02_RS03490	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LTQ02_RS03500	COG2199	diguanylate cyclase activity
LTQ02_RS03515	COG2258	MOSC domain
LTQ02_RS03520	COG2176	DNA-directed DNA polymerase activity
LTQ02_RS03535	COG1448	Aminotransferase
LTQ02_RS03540	COG2770	Histidine kinase
LTQ02_RS03540	COG3437	response regulator, receiver
LTQ02_RS03550	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LTQ02_RS03570	COG0017	Asparaginyl-tRNA synthetase
LTQ02_RS03575	COG0659	secondary active sulfate transmembrane transporter activity
LTQ02_RS03580	COG0840	transmembrane signaling receptor activity
LTQ02_RS03590	COG0583	DNA-binding transcription factor activity
LTQ02_RS03595	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LTQ02_RS03605	COG0814	amino acid
LTQ02_RS03610	COG1760	l-serine dehydratase
LTQ02_RS03615	COG0814	amino acid
LTQ02_RS03620	COG0494	nUDIX hydrolase
LTQ02_RS03630	COG0784	Response regulator, receiver
LTQ02_RS03630	COG2205	protein histidine kinase activity
LTQ02_RS03650	COG3106	COG3106 Predicted ATPase
LTQ02_RS03665	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LTQ02_RS03680	COG0443	Heat shock 70 kDa protein
LTQ02_RS03695	COG3706	GGDEF domain
LTQ02_RS03715	COG3710	Transcriptional regulator
LTQ02_RS03745	COG1643	Atp-dependent helicase
LTQ02_RS03790	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LTQ02_RS03795	COG0072	phenylalanine-tRNA ligase activity
LTQ02_RS03795	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LTQ02_RS03810	COG0596	Alpha beta hydrolase
LTQ02_RS03870	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LTQ02_RS03875	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LTQ02_RS03880	COG2356	endonuclease I
LTQ02_RS03895	COG1464	Belongs to the NlpA lipoprotein family
LTQ02_RS03910	COG1522	sequence-specific DNA binding
LTQ02_RS03915	COG2873	o-acetylhomoserine
LTQ02_RS03925	COG0697	spore germination
LTQ02_RS03955	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LTQ02_RS03970	COG1289	transmembrane transporter activity
LTQ02_RS03985	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
LTQ02_RS04005	COG2205	protein histidine kinase activity
LTQ02_RS04020	COG1342	Belongs to the UPF0251 family
LTQ02_RS04045	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
LTQ02_RS04060	COG0776	regulation of translation
LTQ02_RS04090	COG0840	transmembrane signaling receptor activity
LTQ02_RS04100	COG1404	Belongs to the peptidase S8 family
LTQ02_RS04105	COG0583	DNA-binding transcription factor activity
LTQ02_RS04130	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LTQ02_RS04155	COG0776	regulation of translation
LTQ02_RS04200	COG0500	methyltransferase
LTQ02_RS04215	COG1346	cytolysis
LTQ02_RS04225	COG2925	Exonuclease
LTQ02_RS04290	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
LTQ02_RS04320	COG4989	oxidoreductase activity
LTQ02_RS04330	COG1823	symporter activity
LTQ02_RS04335	COG0702	epimerase
LTQ02_RS04345	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LTQ02_RS04350	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
LTQ02_RS04355	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
LTQ02_RS04375	COG2988	succinylglutamate desuccinylase activity
LTQ02_RS04380	COG4139	cobalamin transport
LTQ02_RS04385	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
LTQ02_RS04415	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LTQ02_RS04420	COG1271	oxidase subunit
LTQ02_RS04425	COG1294	oxidase, subunit
LTQ02_RS04470	COG1247	-acetyltransferase
LTQ02_RS04490	COG2814	Major facilitator Superfamily
LTQ02_RS04505	COG1451	nucleotide metabolic process
LTQ02_RS04515	COG3063	Type IV pilus biogenesis stability protein PilW
LTQ02_RS04520	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
LTQ02_RS04535	COG2195	Cleaves the N-terminal amino acid of tripeptides
LTQ02_RS04590	COG0583	DNA-binding transcription factor activity
LTQ02_RS04650	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ02_RS04690	COG2003	Belongs to the UPF0758 family
LTQ02_RS04700	COG0328	RNA-DNA hybrid ribonuclease activity
LTQ02_RS04715	COG2186	Transcriptional regulator
LTQ02_RS04725	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LTQ02_RS04730	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LTQ02_RS04740	COG2267	carboxylic ester hydrolase activity
LTQ02_RS04745	COG1012	belongs to the aldehyde dehydrogenase family
LTQ02_RS04750	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LTQ02_RS04755	COG1012	belongs to the aldehyde dehydrogenase family
LTQ02_RS04760	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LTQ02_RS04800	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
LTQ02_RS04805	COG0732	type I restriction modification DNA specificity domain
LTQ02_RS04810	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
LTQ02_RS04830	COG0494	nUDIX hydrolase
LTQ02_RS04840	COG1401	restriction endodeoxyribonuclease activity
LTQ02_RS04845	COG1401	restriction endodeoxyribonuclease activity
LTQ02_RS04870	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LTQ02_RS04875	COG3385	transposase activity
LTQ02_RS04885	COG1733	regulation of RNA biosynthetic process
LTQ02_RS04890	COG0583	DNA-binding transcription factor activity
LTQ02_RS04910	COG4964	Belongs to the GSP D family
LTQ02_RS04920	COG0455	bacterial-type flagellum organization
LTQ02_RS04965	COG5001	Diguanylate cyclase
LTQ02_RS04965	COG5002	protein histidine kinase activity
LTQ02_RS04970	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LTQ02_RS04975	COG0583	DNA-binding transcription factor activity
LTQ02_RS05015	COG0840	transmembrane signaling receptor activity
LTQ02_RS05025	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LTQ02_RS05030	COG1482	cell wall glycoprotein biosynthetic process
LTQ02_RS05035	COG0246	Mannitol dehydrogenase
LTQ02_RS05040	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LTQ02_RS05045	COG1312	Catalyzes the dehydration of D-mannonate
LTQ02_RS05050	COG0110	maltose O-acetyltransferase activity
LTQ02_RS05060	COG2186	Transcriptional regulator
LTQ02_RS05070	COG3469	chitinase activity
LTQ02_RS05080	COG4771	TonB-dependent receptor
LTQ02_RS05085	COG2226	methyltransferase
LTQ02_RS05090	COG2203	Gaf domain
LTQ02_RS05090	COG2199	diguanylate cyclase activity
LTQ02_RS05095	COG0454	-acetyltransferase
LTQ02_RS05120	COG0420	3'-5' exonuclease activity
LTQ02_RS05125	COG0419	ATPase involved in DNA repair
LTQ02_RS05145	COG3046	protein related to deoxyribodipyrimidine photolyase
LTQ02_RS05150	COG0415	Belongs to the DNA photolyase family
LTQ02_RS05155	COG0589	response to stress
LTQ02_RS05175	COG2271	Major facilitator Superfamily
LTQ02_RS05180	COG0584	glycerophosphoryl diester phosphodiesterase
LTQ02_RS05190	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LTQ02_RS05210	COG0494	nUDIX hydrolase
LTQ02_RS05225	COG1187	pseudouridine synthase activity
LTQ02_RS05235	COG0110	maltose O-acetyltransferase activity
LTQ02_RS05275	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LTQ02_RS05290	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LTQ02_RS05290	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LTQ02_RS05300	COG1051	belongs to the nudix hydrolase family
LTQ02_RS05350	COG0346	lactoylglutathione lyase activity
LTQ02_RS05360	COG0456	acetyltransferase
LTQ02_RS05380	COG1619	proteins homologs of microcin C7 resistance protein MccF
LTQ02_RS05400	COG0653	protein targeting
LTQ02_RS05405	COG0546	phosphoglycolate phosphatase activity
LTQ02_RS05415	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ02_RS05450	COG0786	glutamate:sodium symporter activity
LTQ02_RS05465	COG0826	peptidase U32
LTQ02_RS05470	COG3385	transposase activity
LTQ02_RS05485	COG1126	abc transporter atp-binding protein
LTQ02_RS05490	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LTQ02_RS05495	COG4215	(ABC) transporter
LTQ02_RS05500	COG4160	amino acid transport
LTQ02_RS05630	COG1742	UPF0060 membrane protein
LTQ02_RS05660	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LTQ02_RS05665	COG1215	transferase activity, transferring glycosyl groups
LTQ02_RS05670	COG0438	transferase activity, transferring glycosyl groups
LTQ02_RS05695	COG0438	transferase activity, transferring glycosyl groups
LTQ02_RS05700	COG2204	response regulator
LTQ02_RS05710	COG3448	diguanylate cyclase activity
LTQ02_RS05710	COG4175	Glycine betaine
LTQ02_RS05715	COG4176	ABC-type proline glycine betaine transport system permease component
LTQ02_RS05735	COG2885	chlorophyll binding
LTQ02_RS05745	COG1793	dna ligase
LTQ02_RS05750	COG0534	Mate efflux family protein
LTQ02_RS05755	COG0307	riboflavin synthase, alpha
LTQ02_RS05765	COG3001	Fructosamine kinase
LTQ02_RS05775	COG0791	NLP P60 protein
LTQ02_RS05790	COG3148	PFAM DTW domain containing protein
LTQ02_RS05795	COG1940	carbohydrate kinase activity
LTQ02_RS05805	COG0303	'Molybdopterin
LTQ02_RS05810	COG0746	molybdenum cofactor guanylyltransferase activity
LTQ02_RS05815	COG3842	ATPase activity
LTQ02_RS05820	COG4662	Binding-protein-dependent transport system inner membrane component
LTQ02_RS05830	COG2204	response regulator
LTQ02_RS05835	COG4191	Histidine kinase
LTQ02_RS05855	COG0488	(ABC) transporter
LTQ02_RS05885	COG3381	protein complex oligomerization
LTQ02_RS05895	COG0243	molybdopterin cofactor binding
LTQ02_RS05895	COG3383	formate dehydrogenase (NAD+) activity
LTQ02_RS05900	COG0437	4 iron, 4 sulfur cluster binding
LTQ02_RS05915	COG0004	ammonium transporteR
LTQ02_RS05920	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LTQ02_RS05930	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
LTQ02_RS05940	COG1177	transmembrane transport
LTQ02_RS05950	COG3842	ATPase activity
LTQ02_RS05970	COG0037	tRNA processing
LTQ02_RS05975	COG0589	response to stress
LTQ02_RS05980	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LTQ02_RS05995	COG2217	Heavy metal translocating P-type atpase
LTQ02_RS06005	COG2010	Cytochrome c
LTQ02_RS06020	COG3278	Belongs to the heme-copper respiratory oxidase family
LTQ02_RS06035	COG0784	Response regulator, receiver
LTQ02_RS06035	COG5002	protein histidine kinase activity
LTQ02_RS06140	COG3120	sequence-specific DNA binding
LTQ02_RS06145	COG1067	ATP-dependent peptidase activity
LTQ02_RS06165	COG0488	(ABC) transporter
LTQ02_RS06175	COG0116	Belongs to the methyltransferase superfamily
LTQ02_RS06175	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LTQ02_RS06185	COG0167	dihydroorotate dehydrogenase activity
LTQ02_RS06190	COG2902	Dehydrogenase
LTQ02_RS06200	COG0308	aminopeptidase N
LTQ02_RS06215	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
LTQ02_RS06220	COG1956	GAF domain-containing protein
LTQ02_RS06225	COG1132	(ABC) transporter
LTQ02_RS06235	COG3008	intermembrane lipid transfer
LTQ02_RS06240	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LTQ02_RS06240	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
LTQ02_RS06245	COG2996	Protein conserved in bacteria
LTQ02_RS06260	COG0574	Belongs to the PEP-utilizing enzyme family
LTQ02_RS06260	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LTQ02_RS06265	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LTQ02_RS06270	COG1666	GTP binding
LTQ02_RS06280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LTQ02_RS06285	COG4597	amino acid ABC transporter
LTQ02_RS06290	COG0765	amino acid transport
LTQ02_RS06295	COG1126	abc transporter atp-binding protein
LTQ02_RS06300	COG0670	Belongs to the BI1 family
LTQ02_RS06305	COG2920	part of a sulfur-relay system
LTQ02_RS06310	COG1254	Belongs to the acylphosphatase family
LTQ02_RS06315	COG0840	transmembrane signaling receptor activity
LTQ02_RS06340	COG2885	chlorophyll binding
LTQ02_RS06350	COG3706	GGDEF domain
LTQ02_RS06355	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LTQ02_RS06360	COG0602	queuosine metabolic process
LTQ02_RS06365	COG0561	phosphatase activity
LTQ02_RS06395	COG2828	Protein conserved in bacteria
LTQ02_RS06400	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LTQ02_RS06405	COG0372	Belongs to the citrate synthase family
LTQ02_RS06410	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
LTQ02_RS06420	COG2814	Major facilitator Superfamily
LTQ02_RS06430	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
LTQ02_RS06460	COG4628	conserved protein (DUF2132)
LTQ02_RS06470	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LTQ02_RS06475	COG0363	glucosamine-6-phosphate deaminase activity
LTQ02_RS06480	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LTQ02_RS06485	COG4565	transcriptional regulatory protein
LTQ02_RS06490	COG3290	protein histidine kinase activity
LTQ02_RS06505	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LTQ02_RS06520	COG1115	amino acid carrier protein
LTQ02_RS06540	COG1115	amino acid carrier protein
LTQ02_RS06560	COG1280	lysine exporter protein (LysE YggA)
LTQ02_RS06565	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
LTQ02_RS06575	COG0730	response to heat
LTQ02_RS06615	COG0454	-acetyltransferase
LTQ02_RS06635	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LTQ02_RS06635	COG4191	Histidine kinase
LTQ02_RS06640	COG0471	metal ion transport
LTQ02_RS06690	COG3033	Beta-eliminating lyase
LTQ02_RS06715	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LTQ02_RS06735	COG2176	DNA-directed DNA polymerase activity
LTQ02_RS06740	COG0517	IMP dehydrogenase activity
LTQ02_RS06745	COG2186	Transcriptional regulator
LTQ02_RS06750	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ02_RS06755	COG2186	Transcriptional regulator
LTQ02_RS06790	COG0840	transmembrane signaling receptor activity
LTQ02_RS06805	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LTQ02_RS06810	COG2186	Transcriptional regulator
LTQ02_RS06830	COG1917	Cupin 2, conserved barrel domain protein
LTQ02_RS06835	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LTQ02_RS06840	COG0800	Aldolase
LTQ02_RS06845	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LTQ02_RS06850	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
LTQ02_RS06860	COG0010	Belongs to the arginase family
LTQ02_RS06865	COG1166	arginine decarboxylase activity
LTQ02_RS06875	COG1309	transcriptional regulator
LTQ02_RS06880	COG0488	(ABC) transporter
LTQ02_RS06895	COG3097	Belongs to the UPF0267 family
LTQ02_RS06900	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LTQ02_RS06905	COG0291	Belongs to the bacterial ribosomal protein bL35 family
LTQ02_RS06915	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LTQ02_RS06920	COG3081	Nucleoid-associated protein
LTQ02_RS07045	COG0740	serine-type endopeptidase activity
LTQ02_RS07080	COG3772	lysozyme
LTQ02_RS07100	COG1078	dGTPase activity
LTQ02_RS07155	COG4197	protein conserved in bacteria, prophage-related
LTQ02_RS07205	COG2856	Zn peptidase
LTQ02_RS07215	COG0582	viral genome integration into host DNA
LTQ02_RS07225	COG4326	sporulation control protein
LTQ02_RS07240	COG0010	Belongs to the arginase family
LTQ02_RS07265	COG0247	lactate metabolic process
LTQ02_RS07265	COG0277	FAD linked oxidase domain protein
LTQ02_RS07300	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
LTQ02_RS07315	COG0281	malic enzyme
LTQ02_RS07320	COG2949	membrane
LTQ02_RS07325	COG0471	metal ion transport
LTQ02_RS07345	COG2199	diguanylate cyclase activity
LTQ02_RS07345	COG2203	Gaf domain
LTQ02_RS07385	COG0492	ferredoxin-NADP+ reductase activity
LTQ02_RS07390	COG4988	ABC transporter
LTQ02_RS07395	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LTQ02_RS07400	COG0840	transmembrane signaling receptor activity
LTQ02_RS07410	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LTQ02_RS07435	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
LTQ02_RS07455	COG3108	Peptidase M15
LTQ02_RS07460	COG2989	Protein conserved in bacteria
LTQ02_RS07485	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LTQ02_RS07495	COG4235	cytochrome complex assembly
LTQ02_RS07495	COG3088	subunit of a heme lyase
LTQ02_RS07510	COG3301	Polysulphide reductase, NrfD
LTQ02_RS07515	COG0437	4 iron, 4 sulfur cluster binding
LTQ02_RS07520	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
LTQ02_RS07525	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
LTQ02_RS07530	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LTQ02_RS07545	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LTQ02_RS07550	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LTQ02_RS07555	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LTQ02_RS07570	COG3381	protein complex oligomerization
LTQ02_RS07575	COG0243	molybdopterin cofactor binding
LTQ02_RS07580	COG0437	4 iron, 4 sulfur cluster binding
LTQ02_RS07585	COG3302	dmso reductase anchor subunit
LTQ02_RS07615	COG0019	diaminopimelate decarboxylase activity
LTQ02_RS07655	COG0322	excinuclease ABC activity
LTQ02_RS07660	COG2197	response regulator
LTQ02_RS07665	COG0417	DNA replication proofreading
LTQ02_RS07675	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LTQ02_RS07690	COG1187	pseudouridine synthase activity
LTQ02_RS07695	COG0009	L-threonylcarbamoyladenylate synthase
LTQ02_RS07700	COG0613	PHP domain protein
LTQ02_RS07710	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LTQ02_RS07715	COG0512	Glutamine amidotransferase of anthranilate synthase
LTQ02_RS07720	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LTQ02_RS07725	COG0135	phosphoribosylanthranilate isomerase activity
LTQ02_RS07725	COG0134	indole-3-glycerol-phosphate synthase activity
LTQ02_RS07730	COG0133	tryptophan synthase activity
LTQ02_RS07735	COG0159	tryptophan synthase activity
LTQ02_RS07740	COG0330	HflC and HflK could
LTQ02_RS07750	COG1301	dicarboxylic acid transport
LTQ02_RS07760	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
LTQ02_RS07775	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LTQ02_RS07790	COG2917	probably involved in intracellular septation
LTQ02_RS07795	COG1607	acyl-coa hydrolase
LTQ02_RS07800	COG2350	Protein conserved in bacteria
LTQ02_RS07810	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LTQ02_RS07815	COG0583	DNA-binding transcription factor activity
LTQ02_RS07835	COG1032	radical SAM domain protein
LTQ02_RS07850	COG0463	Glycosyl transferase, family 2
LTQ02_RS07855	COG0745	RESPONSE REGULATOR receiver
LTQ02_RS07875	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LTQ02_RS07880	COG0583	DNA-binding transcription factor activity
LTQ02_RS07920	COG0786	glutamate:sodium symporter activity
LTQ02_RS07935	COG5002	protein histidine kinase activity
LTQ02_RS07935	COG0784	Response regulator, receiver
LTQ02_RS07950	COG2977	Belongs to the P-Pant transferase superfamily
LTQ02_RS07955	COG1120	ATPase activity
LTQ02_RS07965	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LTQ02_RS07970	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LTQ02_RS07975	COG4592	Periplasmic binding protein
LTQ02_RS07980	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LTQ02_RS07980	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
LTQ02_RS07985	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LTQ02_RS07990	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ02_RS07995	COG1169	isochorismate synthase
LTQ02_RS08000	COG1021	2,3-dihydroxybenzoate-AMP ligase
LTQ02_RS08005	COG2375	cellular response to nickel ion
LTQ02_RS08020	COG1021	2,3-dihydroxybenzoate-AMP ligase
LTQ02_RS08030	COG1629	transport
LTQ02_RS08030	COG4774	siderophore transport
LTQ02_RS08050	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
LTQ02_RS08055	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
LTQ02_RS08060	COG2885	chlorophyll binding
LTQ02_RS08065	COG0823	Involved in the tonB-independent uptake of proteins
LTQ02_RS08080	COG0811	peptide transport
LTQ02_RS08085	COG0824	Thioesterase
LTQ02_RS08095	COG4890	Cyd operon protein YbgT
LTQ02_RS08100	COG1294	oxidase, subunit
LTQ02_RS08105	COG1271	oxidase subunit
LTQ02_RS08110	COG2255	four-way junction helicase activity
LTQ02_RS08115	COG0632	four-way junction helicase activity
LTQ02_RS08120	COG0840	transmembrane signaling receptor activity
LTQ02_RS08125	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
LTQ02_RS08130	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LTQ02_RS08135	COG1801	Protein of unknown function DUF72
LTQ02_RS08140	COG4106	trans-aconitate 2-methyltransferase activity
LTQ02_RS08145	COG0500	methyltransferase
LTQ02_RS08150	COG0189	ligase activity
LTQ02_RS08150	COG4067	protein conserved in archaea
LTQ02_RS08165	COG3383	formate dehydrogenase (NAD+) activity
LTQ02_RS08170	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
LTQ02_RS08175	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
LTQ02_RS08180	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
LTQ02_RS08185	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LTQ02_RS08190	COG1434	Gram-negative-bacterium-type cell wall biogenesis
LTQ02_RS08195	COG0745	RESPONSE REGULATOR receiver
LTQ02_RS08200	COG3381	protein complex oligomerization
LTQ02_RS08205	COG1609	Transcriptional regulator
LTQ02_RS08210	COG3070	regulator of competence-specific genes
LTQ02_RS08230	COG0297	glycogen (starch) synthase activity
LTQ02_RS08235	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LTQ02_RS08240	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LTQ02_RS08250	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
LTQ02_RS08260	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
LTQ02_RS08265	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
LTQ02_RS08270	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LTQ02_RS08275	COG0542	response to heat
LTQ02_RS08280	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
LTQ02_RS08285	COG1278	Cold shock
LTQ02_RS08300	COG1187	pseudouridine synthase activity
LTQ02_RS08310	COG1199	ATP-dependent helicase activity
LTQ02_RS08315	COG0730	response to heat
LTQ02_RS08330	COG2850	peptidyl-arginine hydroxylation
LTQ02_RS08340	COG2814	Major facilitator Superfamily
LTQ02_RS08345	COG1770	oligopeptidase
LTQ02_RS08350	COG0708	Exodeoxyribonuclease III
LTQ02_RS08360	COG4160	amino acid transport
LTQ02_RS08390	COG1882	Formate acetyltransferase
LTQ02_RS08400	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LTQ02_RS08405	COG3013	Belongs to the UPF0304 family
LTQ02_RS08420	COG3713	MltA-interacting MipA family protein
LTQ02_RS08425	COG2766	serine protein kinase
LTQ02_RS08430	COG2718	Belongs to the UPF0229 family
LTQ02_RS08435	COG2719	SpoVR family
LTQ02_RS08440	COG0616	signal peptide processing
LTQ02_RS08445	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ02_RS08450	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LTQ02_RS08465	COG0784	Response regulator, receiver
LTQ02_RS08465	COG0835	chemotaxis
LTQ02_RS08470	COG1940	carbohydrate kinase activity
LTQ02_RS08475	COG0469	pyruvate kinase activity
LTQ02_RS08480	COG4667	esterase of the alpha-beta hydrolase superfamily
LTQ02_RS08500	COG1263	PTS System
LTQ02_RS08500	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LTQ02_RS08505	COG0084	hydrolase, TatD family'
LTQ02_RS08510	COG0470	DNA polymerase III
LTQ02_RS08520	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LTQ02_RS08525	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LTQ02_RS08550	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LTQ02_RS08555	COG0416	fatty acid biosynthetic process
LTQ02_RS08560	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LTQ02_RS08565	COG1399	metal-binding, possibly nucleic acid-binding protein
LTQ02_RS08570	COG0424	maF-like protein
LTQ02_RS08575	COG0564	pseudouridine synthase activity
LTQ02_RS08580	COG1530	ribonuclease E activity
LTQ02_RS08585	COG0659	secondary active sulfate transmembrane transporter activity
LTQ02_RS08590	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LTQ02_RS08595	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
LTQ02_RS08600	COG2982	Protein involved in outer membrane biogenesis
LTQ02_RS08605	COG0572	uridine kinase
LTQ02_RS08610	COG0489	protein tyrosine kinase activity
LTQ02_RS08625	COG2186	Transcriptional regulator
LTQ02_RS08630	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LTQ02_RS08640	COG0653	protein targeting
LTQ02_RS08645	COG2165	general secretion pathway protein
LTQ02_RS08655	COG3706	GGDEF domain
LTQ02_RS08660	COG0366	Alpha amylase catalytic
LTQ02_RS08670	COG3092	negative regulation of chromosome organization
LTQ02_RS08675	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LTQ02_RS08680	COG0857	belongs to the CobB CobQ family
LTQ02_RS08680	COG0280	phosphate acetyltransferase
LTQ02_RS08685	COG0435	Glutathione S-transferase
LTQ02_RS08695	COG0444	Belongs to the ABC transporter superfamily
LTQ02_RS08700	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LTQ02_RS08705	COG0601	transmembrane transport
LTQ02_RS08715	COG0314	molybdopterin synthase activity
LTQ02_RS08720	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
LTQ02_RS08725	COG0315	cyclic pyranopterin monophosphate synthase activity
LTQ02_RS08730	COG0521	Mo-molybdopterin cofactor biosynthetic process
LTQ02_RS08735	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LTQ02_RS08740	COG0391	Required for morphogenesis under gluconeogenic growth conditions
LTQ02_RS08745	COG2198	Histidine kinase
LTQ02_RS08750	COG2204	response regulator
LTQ02_RS08755	COG0556	nucleotide-excision repair
LTQ02_RS08765	COG4657	Part of a membrane complex involved in electron transport
LTQ02_RS08770	COG2878	Part of a membrane complex involved in electron transport
LTQ02_RS08775	COG4656	Part of a membrane complex involved in electron transport
LTQ02_RS08780	COG4658	electron transport chain
LTQ02_RS08785	COG4659	FMN binding
LTQ02_RS08790	COG4660	Part of a membrane complex involved in electron transport
LTQ02_RS08795	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LTQ02_RS08800	COG0346	lactoylglutathione lyase activity
LTQ02_RS08820	COG2056	Na+-H+ antiporter family
LTQ02_RS08830	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
LTQ02_RS08850	COG1454	alcohol dehydrogenase
LTQ02_RS08850	COG1012	belongs to the aldehyde dehydrogenase family
LTQ02_RS08855	COG2095	MarC family integral membrane protein
LTQ02_RS08860	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LTQ02_RS08865	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LTQ02_RS08870	COG1757	Na H antiporter
LTQ02_RS08885	COG3081	Nucleoid-associated protein
LTQ02_RS08890	COG3082	Protein of unknown function (DUF1414)
LTQ02_RS08905	COG0484	heat shock protein binding
LTQ02_RS08910	COG0443	Heat shock 70 kDa protein
LTQ02_RS08925	COG1959	2 iron, 2 sulfur cluster binding
LTQ02_RS08935	COG0840	transmembrane signaling receptor activity
LTQ02_RS08940	COG0123	including yeast histone deacetylase and acetoin utilization protein
LTQ02_RS08955	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LTQ02_RS08960	COG0778	Nitroreductase
LTQ02_RS08965	COG0446	pyridine nucleotide-disulphide oxidoreductase
LTQ02_RS08965	COG1902	pentaerythritol trinitrate reductase activity
LTQ02_RS08975	COG0252	asparaginase activity
LTQ02_RS08980	COG3139	Protein of unknown function (DUF1315)
LTQ02_RS08990	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LTQ02_RS08995	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LTQ02_RS09010	COG2226	methyltransferase
LTQ02_RS09030	COG1785	Belongs to the alkaline phosphatase family
LTQ02_RS09035	COG2983	Belongs to the UPF0260 family
LTQ02_RS09050	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LTQ02_RS09055	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LTQ02_RS09060	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LTQ02_RS09065	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LTQ02_RS09070	COG2832	Protein of unknown function (DUF454)
LTQ02_RS09080	COG0745	RESPONSE REGULATOR receiver
LTQ02_RS09085	COG0583	DNA-binding transcription factor activity
LTQ02_RS09090	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LTQ02_RS09095	COG1286	toxin biosynthetic process
LTQ02_RS09100	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
LTQ02_RS09105	COG0285	dihydrofolate synthase activity
LTQ02_RS09110	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LTQ02_RS09115	COG0101	tRNA pseudouridine synthase activity
LTQ02_RS09125	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LTQ02_RS09130	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LTQ02_RS09140	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LTQ02_RS09160	COG3101	peptidyl-lysine hydroxylation
LTQ02_RS09165	COG2860	membrane
LTQ02_RS09170	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LTQ02_RS09185	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LTQ02_RS09195	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LTQ02_RS09200	COG0583	DNA-binding transcription factor activity
LTQ02_RS09205	COG2951	lytic endotransglycosylase activity
LTQ02_RS09210	COG3100	YcgL domain-containing protein
LTQ02_RS09215	COG0850	regulation of cytokinetic process
LTQ02_RS09220	COG2894	cell division
LTQ02_RS09225	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
LTQ02_RS09230	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
LTQ02_RS09235	COG0318	PFAM AMP-dependent synthetase and ligase
LTQ02_RS09240	COG0596	Alpha beta hydrolase
LTQ02_RS09255	COG1214	PFAM Peptidase M22, glycoprotease
LTQ02_RS09260	COG1199	ATP-dependent helicase activity
LTQ02_RS09270	COG0788	formyltetrahydrofolate deformylase activity
LTQ02_RS09275	COG3102	Protein conserved in bacteria
LTQ02_RS09280	COG0018	arginyl-trna synthetase
LTQ02_RS09300	COG1918	ferrous iron import across plasma membrane
LTQ02_RS09315	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
LTQ02_RS09320	COG1121	(ABC) transporter
LTQ02_RS09325	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LTQ02_RS09335	COG0045	succinate-CoA ligase (ADP-forming) activity
LTQ02_RS09340	COG0508	dehydrogenase complex catalyzes the overall conversion of
LTQ02_RS09345	COG0567	Dehydrogenase, E1 component
LTQ02_RS09355	COG1053	succinate dehydrogenase
LTQ02_RS09360	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
LTQ02_RS09370	COG0372	Belongs to the citrate synthase family
LTQ02_RS09375	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LTQ02_RS09385	COG0033	Phosphoglucomutase
LTQ02_RS09390	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
LTQ02_RS09395	COG0596	Alpha beta hydrolase
LTQ02_RS09420	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LTQ02_RS09425	COG1263	PTS System
LTQ02_RS09425	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LTQ02_RS09430	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LTQ02_RS09435	COG1846	Transcriptional regulator
LTQ02_RS09435	COG1940	carbohydrate kinase activity
LTQ02_RS09440	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LTQ02_RS09440	COG4651	solute:proton antiporter activity
LTQ02_RS09445	COG0367	asparagine synthase
LTQ02_RS09450	COG0250	Participates in transcription elongation, termination and antitermination
LTQ02_RS09455	COG3104	oligopeptide transport
LTQ02_RS09460	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
LTQ02_RS09465	COG0563	adenylate kinase activity
LTQ02_RS09470	COG0326	Molecular chaperone. Has ATPase activity
LTQ02_RS09475	COG3710	Transcriptional regulator
LTQ02_RS09490	COG0622	Phosphoesterase
LTQ02_RS09515	COG1090	epimerase
LTQ02_RS09520	COG0300	oxidoreductase activity
LTQ02_RS09525	COG3118	belongs to the thioredoxin family
LTQ02_RS09530	COG0330	HflC and HflK could
LTQ02_RS09540	COG0789	Transcriptional regulator
LTQ02_RS09565	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LTQ02_RS09575	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
LTQ02_RS09585	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ02_RS09595	COG2190	(PTS) system
LTQ02_RS09600	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LTQ02_RS09605	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LTQ02_RS09610	COG2837	iron assimilation
LTQ02_RS09635	COG1393	Belongs to the ArsC family
LTQ02_RS09640	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LTQ02_RS09655	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
LTQ02_RS09660	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LTQ02_RS09665	COG2716	regulation of RNA biosynthetic process
LTQ02_RS09670	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LTQ02_RS09685	COG4783	chaperone-mediated protein folding
LTQ02_RS09690	COG1393	Belongs to the ArsC family
LTQ02_RS09710	COG2233	PERMEase
LTQ02_RS09715	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LTQ02_RS09720	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
LTQ02_RS09725	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LTQ02_RS09730	COG0121	glutamine amidotransferase
LTQ02_RS09735	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
LTQ02_RS09750	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LTQ02_RS09755	COG0328	RNA-DNA hybrid ribonuclease activity
LTQ02_RS09760	COG2226	methyltransferase
LTQ02_RS09765	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LTQ02_RS09770	COG0741	lytic transglycosylase activity
LTQ02_RS09770	COG1388	LysM domain
LTQ02_RS09780	COG3021	interspecies interaction between organisms
LTQ02_RS09785	COG0347	Belongs to the P(II) protein family
LTQ02_RS09795	COG0037	tRNA processing
LTQ02_RS09800	COG0825	malonyl-CoA metabolic process
LTQ02_RS09805	COG0587	DNA-directed DNA polymerase activity
LTQ02_RS09810	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LTQ02_RS09820	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LTQ02_RS09825	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LTQ02_RS09830	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LTQ02_RS09835	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
LTQ02_RS09845	COG0750	zinc metalloprotease
LTQ02_RS09855	COG0575	Belongs to the CDS family
LTQ02_RS09860	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LTQ02_RS09865	COG0233	cytoplasmic translational termination
LTQ02_RS09870	COG0528	UMP kinase activity
LTQ02_RS09875	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LTQ02_RS09880	COG0052	Belongs to the universal ribosomal protein uS2 family
LTQ02_RS09885	COG0024	Methionine aminopeptidase
LTQ02_RS09890	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
LTQ02_RS09900	COG0564	pseudouridine synthase activity
LTQ02_RS09905	COG3098	single-species biofilm formation
LTQ02_RS09930	COG1671	Belongs to the UPF0178 family
LTQ02_RS09940	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
LTQ02_RS09950	COG0254	rRNA binding
LTQ02_RS09955	COG1720	tRNA m6t6A37 methyltransferase activity
LTQ02_RS09960	COG0442	prolyl-tRNA aminoacylation
LTQ02_RS09985	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LTQ02_RS10005	COG0366	Alpha amylase catalytic
LTQ02_RS10010	COG1263	PTS System
LTQ02_RS10010	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LTQ02_RS10015	COG1609	Transcriptional regulator
LTQ02_RS10025	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LTQ02_RS10030	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LTQ02_RS10035	COG2011	ABC-type metal ion transport system permease component
LTQ02_RS10040	COG1464	Belongs to the NlpA lipoprotein family
LTQ02_RS10045	COG4580	involved in the transport of maltose and maltodextrins
LTQ02_RS10050	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
LTQ02_RS10060	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
LTQ02_RS10060	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
LTQ02_RS10075	COG1611	Belongs to the LOG family
LTQ02_RS10080	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LTQ02_RS10090	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
LTQ02_RS10105	COG0583	DNA-binding transcription factor activity
LTQ02_RS10110	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LTQ02_RS10110	COG0301	tRNA thio-modification
LTQ02_RS10120	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LTQ02_RS10125	COG1722	exodeoxyribonuclease VII activity
LTQ02_RS10130	COG0142	geranyltranstransferase activity
LTQ02_RS10135	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LTQ02_RS10145	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LTQ02_RS10155	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LTQ02_RS10175	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LTQ02_RS10175	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LTQ02_RS10180	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LTQ02_RS10185	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LTQ02_RS10200	COG1073	alpha beta
LTQ02_RS10205	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
LTQ02_RS10210	COG2252	PERMEase
LTQ02_RS10215	COG2195	Cleaves the N-terminal amino acid of tripeptides
LTQ02_RS10235	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LTQ02_RS10250	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LTQ02_RS10255	COG1609	Transcriptional regulator
LTQ02_RS10260	COG2017	converts alpha-aldose to the beta-anomer
LTQ02_RS10270	COG1085	galactose-1-phosphate uridylyltransferase
LTQ02_RS10275	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LTQ02_RS10280	COG1609	Transcriptional regulator
LTQ02_RS10285	COG3250	beta-galactosidase activity
LTQ02_RS10290	COG2731	YhcH YjgK YiaL family protein
LTQ02_RS10295	COG0531	amino acid
LTQ02_RS10300	COG0531	amino acid
LTQ02_RS10310	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
LTQ02_RS10310	COG3408	Glycogen debranching enzyme
LTQ02_RS10315	COG3250	beta-galactosidase activity
LTQ02_RS10325	COG0395	ABC-type sugar transport system, permease component
LTQ02_RS10330	COG1175	transmembrane transport
LTQ02_RS10340	COG0534	Mate efflux family protein
LTQ02_RS10345	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LTQ02_RS10355	COG1609	Transcriptional regulator
LTQ02_RS10365	COG0583	DNA-binding transcription factor activity
LTQ02_RS10370	COG2059	Chromate
LTQ02_RS10420	COG4964	Belongs to the GSP D family
LTQ02_RS10450	COG1022	Amp-dependent synthetase and ligase
LTQ02_RS10470	COG0583	DNA-binding transcription factor activity
LTQ02_RS10480	COG0583	DNA-binding transcription factor activity
LTQ02_RS10485	COG4628	conserved protein (DUF2132)
LTQ02_RS10515	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LTQ02_RS10530	COG0560	Phosphoserine phosphatase
LTQ02_RS10540	COG0813	purine-nucleoside phosphorylase activity
LTQ02_RS10550	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
LTQ02_RS10555	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LTQ02_RS10560	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LTQ02_RS10575	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LTQ02_RS10590	COG3153	acetyltransferase
LTQ02_RS10595	COG3154	lipid carrier protein
LTQ02_RS10605	COG0826	peptidase U32
LTQ02_RS10610	COG0826	peptidase U32
LTQ02_RS10615	COG0534	Mate efflux family protein
LTQ02_RS10630	COG1185	polyribonucleotide nucleotidyltransferase activity
LTQ02_RS10635	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LTQ02_RS10640	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LTQ02_RS10645	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LTQ02_RS10650	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LTQ02_RS10655	COG0195	Participates in both transcription termination and antitermination
LTQ02_RS10660	COG0779	Required for maturation of 30S ribosomal subunits
LTQ02_RS10675	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LTQ02_RS10680	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LTQ02_RS10685	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LTQ02_RS10690	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LTQ02_RS10695	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
LTQ02_RS10700	COG1534	Rna-binding protein
LTQ02_RS10705	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LTQ02_RS10715	COG2027	D-alanyl-D-alanine carboxypeptidase
LTQ02_RS10720	COG2239	Acts as a magnesium transporter
LTQ02_RS10725	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LTQ02_RS10730	COG0739	heme binding
LTQ02_RS10745	COG0316	Belongs to the HesB IscA family
LTQ02_RS10750	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
LTQ02_RS10755	COG0628	permease
LTQ02_RS10760	COG2813	Specifically methylates the guanine in position
LTQ02_RS10770	COG0747	negative chemotaxis
LTQ02_RS10780	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LTQ02_RS10785	COG0444	Belongs to the ABC transporter superfamily
LTQ02_RS10790	COG4608	Belongs to the ABC transporter superfamily
LTQ02_RS10800	COG2971	BadF BadG BcrA BcrD
LTQ02_RS10815	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LTQ02_RS10820	COG3842	ATPase activity
LTQ02_RS10830	COG1840	ABC-type Fe3 transport system, periplasmic component
LTQ02_RS10835	COG0004	ammonium transporteR
LTQ02_RS10855	COG1752	Esterase of the alpha-beta hydrolase superfamily
LTQ02_RS10860	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LTQ02_RS10865	COG1643	Atp-dependent helicase
LTQ02_RS10870	COG1489	DNA binding
LTQ02_RS10890	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LTQ02_RS10895	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
LTQ02_RS10900	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
LTQ02_RS10910	COG1131	(ABC) transporter
LTQ02_RS10915	COG0659	secondary active sulfate transmembrane transporter activity
LTQ02_RS10920	COG0288	reversible hydration of carbon dioxide
LTQ02_RS10935	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LTQ02_RS10945	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
LTQ02_RS10950	COG2186	Transcriptional regulator
LTQ02_RS10960	COG0157	Belongs to the NadC ModD family
LTQ02_RS10970	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LTQ02_RS10975	COG1459	type II secretion system
LTQ02_RS10985	COG0237	dephospho-CoA kinase activity
LTQ02_RS10990	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
LTQ02_RS11000	COG0335	large ribosomal subunit rRNA binding
LTQ02_RS11005	COG0336	Belongs to the RNA methyltransferase TrmD family
LTQ02_RS11010	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LTQ02_RS11015	COG0228	four-way junction DNA binding
LTQ02_RS11020	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LTQ02_RS11025	COG4137	Cytochrome C assembly protein
LTQ02_RS11030	COG4536	flavin adenine dinucleotide binding
LTQ02_RS11035	COG1854	S-ribosylhomocysteine lyase activity
LTQ02_RS11045	COG2918	glutathione biosynthetic process
LTQ02_RS11050	COG0612	Peptidase, M16
LTQ02_RS11055	COG1238	metal cluster binding
LTQ02_RS11065	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
LTQ02_RS11070	COG0511	ligase activity, forming carbon-carbon bonds
LTQ02_RS11070	COG5016	pyruvate
LTQ02_RS11075	COG3630	sodium ion export across plasma membrane
LTQ02_RS11135	COG0527	aspartate kinase activity
LTQ02_RS11150	COG1546	Belongs to the CinA family
LTQ02_RS11160	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LTQ02_RS11170	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
LTQ02_RS11175	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
LTQ02_RS11180	COG0585	pseudouridine synthase activity
LTQ02_RS11190	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
LTQ02_RS11195	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LTQ02_RS11200	COG0148	phosphopyruvate hydratase activity
LTQ02_RS11205	COG0504	CTP synthase activity
LTQ02_RS11210	COG3956	TIGRFAM MazG family protein
LTQ02_RS11220	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LTQ02_RS11225	COG2205	protein histidine kinase activity
LTQ02_RS11225	COG3437	response regulator, receiver
LTQ02_RS11225	COG3850	Histidine kinase
LTQ02_RS11225	COG4999	Histidine kinase
LTQ02_RS11230	COG0736	holo-[acyl-carrier-protein] synthase activity
LTQ02_RS11235	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
LTQ02_RS11240	COG1381	Involved in DNA repair and RecF pathway recombination
LTQ02_RS11245	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LTQ02_RS11250	COG0571	ribonuclease III activity
LTQ02_RS11260	COG0481	GTPase activity
LTQ02_RS11280	COG1595	DNA-templated transcription, initiation
LTQ02_RS11285	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LTQ02_RS11290	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
LTQ02_RS11295	COG0354	folic acid binding
LTQ02_RS11310	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LTQ02_RS11315	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LTQ02_RS11320	COG3079	Belongs to the UPF0149 family
LTQ02_RS11325	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
LTQ02_RS11335	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LTQ02_RS11340	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LTQ02_RS11345	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LTQ02_RS11360	COG1279	arginine transmembrane transporter activity
LTQ02_RS11365	COG0668	transmembrane transport
LTQ02_RS11370	COG0191	fructose-bisphosphate aldolase activity
LTQ02_RS11385	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LTQ02_RS11390	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LTQ02_RS11400	COG3091	SprT-like family
LTQ02_RS11405	COG2356	endonuclease I
LTQ02_RS11415	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LTQ02_RS11420	COG0189	ligase activity
LTQ02_RS11425	COG1678	Uncharacterized ACR, COG1678
LTQ02_RS11430	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LTQ02_RS11450	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LTQ02_RS11455	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LTQ02_RS11460	COG0762	integral membrane protein
LTQ02_RS11480	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LTQ02_RS11485	COG2066	Belongs to the glutaminase family
LTQ02_RS11500	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
LTQ02_RS11505	COG0741	lytic transglycosylase activity
LTQ02_RS11655	COG0795	lipopolysaccharide-transporting ATPase activity
LTQ02_RS11660	COG0795	lipopolysaccharide-transporting ATPase activity
LTQ02_RS11665	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LTQ02_RS11670	COG2927	DNA polymerase III (CHI subunit)
LTQ02_RS11675	COG0525	valine-tRNA ligase activity
LTQ02_RS11680	COG0501	Belongs to the peptidase M48B family
LTQ02_RS11685	COG4269	membrane
LTQ02_RS11695	COG0456	acetyltransferase
LTQ02_RS11725	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
LTQ02_RS11730	COG0251	oxidation-reduction process
LTQ02_RS11735	COG0204	Acyl-transferase
LTQ02_RS11740	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LTQ02_RS11745	COG5007	Belongs to the BolA IbaG family
LTQ02_RS11755	COG2854	intermembrane phospholipid transfer
LTQ02_RS11760	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LTQ02_RS11765	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LTQ02_RS11770	COG1127	ABC transporter
LTQ02_RS11780	COG0517	IMP dehydrogenase activity
LTQ02_RS11780	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
LTQ02_RS11785	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
LTQ02_RS11795	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
LTQ02_RS11800	COG1137	ATPase activity
LTQ02_RS11810	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LTQ02_RS11815	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ02_RS11820	COG1660	Displays ATPase and GTPase activities
LTQ02_RS11825	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ02_RS11830	COG2239	Acts as a magnesium transporter
LTQ02_RS11835	COG0312	modulator of DNA gyrase
LTQ02_RS11840	COG3028	Belongs to the UPF0307 family
LTQ02_RS11845	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
LTQ02_RS11850	COG1178	ABC-type Fe3 transport system permease component
LTQ02_RS11855	COG4143	(ABC) transporter
LTQ02_RS11860	COG0163	prenyltransferase activity
LTQ02_RS11865	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LTQ02_RS11870	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
LTQ02_RS11880	COG2105	PFAM AIG2 family protein
LTQ02_RS11890	COG0729	surface antigen
LTQ02_RS11895	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LTQ02_RS11905	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
LTQ02_RS11940	COG0529	Catalyzes the synthesis of activated sulfate
LTQ02_RS11945	COG0471	metal ion transport
LTQ02_RS11945	COG3273	potassium ion transport
LTQ02_RS11950	COG2895	sulfate adenylyltransferase (ATP) activity
LTQ02_RS11955	COG0175	sulfate reduction
LTQ02_RS12005	COG2153	protein acetylation
LTQ02_RS12015	COG3061	Opacity-associated protein A
LTQ02_RS12015	COG3266	domain, Protein
LTQ02_RS12020	COG0545	Peptidyl-prolyl cis-trans isomerase
LTQ02_RS12030	COG0203	ribosomal protein L17
LTQ02_RS12035	COG0202	RNA polymerase activity
LTQ02_RS12040	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LTQ02_RS12045	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LTQ02_RS12050	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LTQ02_RS12055	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LTQ02_RS12060	COG0201	protein transport
LTQ02_RS12065	COG0200	Binds to the 23S rRNA
LTQ02_RS12070	COG1841	ribosomal large subunit assembly
LTQ02_RS12075	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LTQ02_RS12085	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LTQ02_RS12090	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LTQ02_RS12095	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LTQ02_RS12100	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LTQ02_RS12105	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LTQ02_RS12110	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LTQ02_RS12115	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LTQ02_RS12125	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LTQ02_RS12130	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LTQ02_RS12140	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LTQ02_RS12145	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LTQ02_RS12150	COG0089	rRNA binding
LTQ02_RS12155	COG0088	Forms part of the polypeptide exit tunnel
LTQ02_RS12160	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LTQ02_RS12175	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LTQ02_RS12180	COG0049	tRNA binding
LTQ02_RS12185	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LTQ02_RS12195	COG2923	Belongs to the DsrF TusC family
LTQ02_RS12200	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
LTQ02_RS12205	COG2964	Protein conserved in bacteria
LTQ02_RS12210	COG0545	Peptidyl-prolyl cis-trans isomerase
LTQ02_RS12220	COG2900	Belongs to the SlyX family
LTQ02_RS12225	COG1446	asparaginase
LTQ02_RS12230	COG1047	Peptidyl-prolyl cis-trans
LTQ02_RS12245	COG2249	NAD(P)H dehydrogenase (quinone) activity
LTQ02_RS12250	COG0488	(ABC) transporter
LTQ02_RS12260	COG0429	hydrolase of the alpha beta-hydrolase fold
LTQ02_RS12265	COG3089	Belongs to the UPF0270 family
LTQ02_RS12270	COG3954	Phosphoribulokinase
LTQ02_RS12275	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LTQ02_RS12285	COG1012	belongs to the aldehyde dehydrogenase family
LTQ02_RS12295	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LTQ02_RS12300	COG0512	Glutamine amidotransferase of anthranilate synthase
LTQ02_RS12305	COG2356	endonuclease I
LTQ02_RS12325	COG0180	Tryptophanyl-tRNA synthetase
LTQ02_RS12330	COG0546	phosphoglycolate phosphatase activity
LTQ02_RS12335	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LTQ02_RS12340	COG0338	D12 class N6 adenine-specific DNA methyltransferase
LTQ02_RS12350	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
LTQ02_RS12400	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LTQ02_RS12400	COG0678	peroxiredoxin activity
LTQ02_RS12405	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LTQ02_RS12410	COG0251	oxidation-reduction process
LTQ02_RS12420	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
LTQ02_RS12420	COG0165	Argininosuccinate lyase
LTQ02_RS12435	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LTQ02_RS12440	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LTQ02_RS12445	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LTQ02_RS12455	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
LTQ02_RS12460	COG0460	homoserine dehydrogenase
LTQ02_RS12460	COG0527	aspartate kinase activity
LTQ02_RS12465	COG0626	cystathionine gamma-synthase activity
LTQ02_RS12470	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
LTQ02_RS12475	COG0281	malic enzyme
LTQ02_RS12480	COG0254	rRNA binding
LTQ02_RS12485	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LTQ02_RS12490	COG1609	Transcriptional regulator
LTQ02_RS12500	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LTQ02_RS12505	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LTQ02_RS12510	COG1575	Belongs to the MenA family. Type 1 subfamily
LTQ02_RS12515	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LTQ02_RS12520	COG3074	FtsZ-dependent cytokinesis
LTQ02_RS12525	COG1494	fructose-1,6-bisphosphatase
LTQ02_RS12540	COG3152	Membrane
LTQ02_RS12560	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LTQ02_RS12570	COG0745	RESPONSE REGULATOR receiver
LTQ02_RS12575	COG2205	protein histidine kinase activity
LTQ02_RS12585	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LTQ02_RS12590	COG3030	protein affecting phage T7 exclusion by the F plasmid
LTQ02_RS12595	COG1027	Aspartate ammonia-lyase
LTQ02_RS12600	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LTQ02_RS12605	COG1288	antiporter activity
LTQ02_RS12620	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LTQ02_RS12625	COG0540	Belongs to the ATCase OTCase family
LTQ02_RS12630	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
LTQ02_RS12635	COG1438	arginine binding
LTQ02_RS12640	COG4232	protein-disulfide reductase activity
LTQ02_RS12650	COG3263	regulation of cellular component size
LTQ02_RS12660	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LTQ02_RS12675	COG0784	Response regulator, receiver
LTQ02_RS12675	COG2198	Histidine kinase
LTQ02_RS12675	COG2205	protein histidine kinase activity
LTQ02_RS12680	COG2814	Major facilitator Superfamily
LTQ02_RS12695	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LTQ02_RS12700	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
LTQ02_RS12705	COG0511	ligase activity, forming carbon-carbon bonds
LTQ02_RS12710	COG0439	Biotin carboxylase
LTQ02_RS12715	COG2264	protein methyltransferase activity
LTQ02_RS12720	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LTQ02_RS12725	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
LTQ02_RS12730	COG0789	Transcriptional regulator
LTQ02_RS12735	COG0138	bifunctional purine biosynthesis protein purh
LTQ02_RS12740	COG0151	Belongs to the GarS family
LTQ02_RS12755	COG1253	flavin adenine dinucleotide binding
LTQ02_RS12760	COG3068	Protein conserved in bacteria
LTQ02_RS12780	COG2816	NAD+ diphosphatase activity
LTQ02_RS12785	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
LTQ02_RS12800	COG0222	ribosome binding
LTQ02_RS12805	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LTQ02_RS12810	COG0081	regulation of translation
LTQ02_RS12820	COG0250	Participates in transcription elongation, termination and antitermination
LTQ02_RS12825	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LTQ02_RS12855	COG1072	(Pantothenic acid kinase))
LTQ02_RS12865	COG0812	UDP-N-acetylmuramate dehydrogenase activity
LTQ02_RS12875	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LTQ02_RS12975	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
LTQ02_RS12985	COG4206	TonB-dependent receptor
LTQ02_RS12990	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LTQ02_RS13010	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LTQ02_RS13015	COG0534	Mate efflux family protein
LTQ02_RS13020	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
LTQ02_RS13025	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LTQ02_RS13030	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LTQ02_RS13035	COG2937	Belongs to the GPAT DAPAT family
LTQ02_RS13040	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
LTQ02_RS13045	COG3161	chorismate lyase activity
LTQ02_RS13050	COG1580	Controls the rotational direction of flagella during chemotaxis
LTQ02_RS13055	COG0705	Rhomboid family
LTQ02_RS13060	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LTQ02_RS13070	COG2177	Part of the ABC transporter FtsEX involved in
LTQ02_RS13075	COG2884	Cell division ATP-binding protein ftsE
LTQ02_RS13085	COG0742	ribosomal rna small subunit methyltransferase
LTQ02_RS13095	COG2095	MarC family integral membrane protein
LTQ02_RS13135	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LTQ02_RS13140	COG0640	Transcriptional regulator
LTQ02_RS13145	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
LTQ02_RS13150	COG1280	lysine exporter protein (LysE YggA)
LTQ02_RS13155	COG2267	carboxylic ester hydrolase activity
LTQ02_RS13160	COG0561	phosphatase activity
LTQ02_RS13175	COG3148	PFAM DTW domain containing protein
LTQ02_RS13180	COG2200	EAL domain
LTQ02_RS13180	COG3287	FIST C domain
LTQ02_RS13180	COG2199	diguanylate cyclase activity
LTQ02_RS13185	COG2199	diguanylate cyclase activity
LTQ02_RS13185	COG2200	EAL domain
LTQ02_RS13185	COG3287	FIST C domain
LTQ02_RS13190	COG1011	Hydrolase
LTQ02_RS13195	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
LTQ02_RS13205	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
LTQ02_RS13210	COG0019	diaminopimelate decarboxylase activity
LTQ02_RS13220	COG1965	Belongs to the frataxin family
LTQ02_RS13225	COG3072	Adenylate cyclase
LTQ02_RS13230	COG0181	hydroxymethylbilane synthase activity
LTQ02_RS13235	COG1587	Uroporphyrinogen-III synthase
LTQ02_RS13240	COG2959	enzyme of heme biosynthesis
LTQ02_RS13245	COG3071	HemY protein
LTQ02_RS13300	COG2871	sodium ion transport
LTQ02_RS13305	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
LTQ02_RS13320	COG3118	belongs to the thioredoxin family
LTQ02_RS13325	COG0513	Belongs to the DEAD box helicase family
LTQ02_RS13330	COG0248	Ppx GppA phosphatase
LTQ02_RS13335	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LTQ02_RS13345	COG0514	ATP-dependent DNA helicase (RecQ)
LTQ02_RS13350	COG2962	Rard protein
LTQ02_RS13360	COG1280	lysine exporter protein (LysE YggA)
LTQ02_RS13365	COG0405	Gamma-glutamyltransferase
LTQ02_RS13375	COG0210	DNA helicase
LTQ02_RS13385	COG3220	belongs to the UPF0276 family
LTQ02_RS13415	COG0006	proline dipeptidase activity
LTQ02_RS13415	COG0006	proline dipeptidase activity
LTQ02_RS13425	COG2022	thiamine diphosphate biosynthetic process
LTQ02_RS13430	COG2104	thiamine diphosphate biosynthetic process
LTQ02_RS13435	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LTQ02_RS13440	COG0352	thiamine-phosphate diphosphorylase activity
LTQ02_RS13445	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
LTQ02_RS13455	COG2132	Multicopper oxidase
LTQ02_RS13500	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
LTQ02_RS13505	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LTQ02_RS13510	COG1739	Uncharacterized protein family UPF0029
LTQ02_RS13515	COG1024	Enoyl-CoA hydratase
LTQ02_RS13515	COG1250	3-hydroxyacyl-CoA dehydrogenase
LTQ02_RS13520	COG0183	Belongs to the thiolase family
LTQ02_RS13525	COG0604	alcohol dehydrogenase
LTQ02_RS13540	COG0425	Belongs to the sulfur carrier protein TusA family
LTQ02_RS13550	COG2119	membrane
LTQ02_RS13555	COG0752	glycyl-tRNA synthetase alpha subunit
LTQ02_RS13560	COG0751	glycine-tRNA ligase activity
LTQ02_RS13565	COG0366	Alpha amylase catalytic
LTQ02_RS13570	COG3977	Valine--pyruvate aminotransferase
LTQ02_RS13580	COG0187	DNA topoisomerase II activity
LTQ02_RS13585	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LTQ02_RS13590	COG0592	DNA-directed DNA polymerase activity
LTQ02_RS13595	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LTQ02_RS13610	COG1126	abc transporter atp-binding protein
LTQ02_RS13615	COG0230	Belongs to the bacterial ribosomal protein bL34 family
LTQ02_RS13620	COG0594	ribonuclease P activity
LTQ02_RS13625	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
LTQ02_RS13630	COG0706	membrane insertase activity
LTQ02_RS13640	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LTQ02_RS13645	COG0445	tRNA wobble uridine modification
LTQ02_RS13650	COG0357	Ribosomal RNA small subunit methyltransferase G
LTQ02_RS13655	COG1192	Involved in chromosome partitioning
LTQ02_RS13660	COG1475	DNA binding
LTQ02_RS13665	COG3312	ion transport
LTQ02_RS13680	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LTQ02_RS13685	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LTQ02_RS13690	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LTQ02_RS13695	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LTQ02_RS13700	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LTQ02_RS13705	COG0355	proton-transporting ATP synthase activity, rotational mechanism
LTQ02_RS13715	COG2814	Major facilitator Superfamily
LTQ02_RS13720	COG0583	DNA-binding transcription factor activity
LTQ02_RS13730	COG0129	dihydroxy-acid dehydratase activity
LTQ02_RS13735	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LTQ02_RS13740	COG3978	acetolactate synthase activity
LTQ02_RS13760	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LTQ02_RS13765	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LTQ02_RS13775	COG3084	Protein conserved in bacteria
LTQ02_RS13785	COG4326	sporulation control protein
LTQ02_RS13790	COG1272	protein, Hemolysin III
LTQ02_RS13800	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LTQ02_RS13805	COG0569	domain protein
LTQ02_RS13810	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LTQ02_RS13810	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LTQ02_RS13815	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LTQ02_RS13830	COG0758	DNA mediated transformation
LTQ02_RS13835	COG2922	Belongs to the Smg family
LTQ02_RS13840	COG0551	DNA topoisomerase type I activity
LTQ02_RS13845	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LTQ02_RS13850	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LTQ02_RS13855	COG0009	L-threonylcarbamoyladenylate synthase
LTQ02_RS13860	COG0408	coproporphyrinogen oxidase activity
LTQ02_RS13865	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LTQ02_RS13875	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LTQ02_RS13920	COG0583	DNA-binding transcription factor activity
LTQ02_RS13925	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LTQ02_RS13930	COG2960	long-chain fatty acid transporting porin activity
LTQ02_RS13935	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LTQ02_RS13940	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LTQ02_RS13945	COG1309	transcriptional regulator
LTQ02_RS13995	COG0601	transmembrane transport
LTQ02_RS14000	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LTQ02_RS14065	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LTQ02_RS14070	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
LTQ02_RS14080	COG1522	sequence-specific DNA binding
LTQ02_RS14090	COG0742	ribosomal rna small subunit methyltransferase
LTQ02_RS14105	COG0589	response to stress
LTQ02_RS14110	COG1528	Iron-storage protein
LTQ02_RS14130	COG1322	Protein conserved in bacteria
LTQ02_RS14135	COG2226	methyltransferase
LTQ02_RS14140	COG3165	ubiquinone biosynthetic process from chorismate
LTQ02_RS14145	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
LTQ02_RS14150	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LTQ02_RS14155	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LTQ02_RS14160	COG0805	protein transport
LTQ02_RS14165	COG0084	hydrolase, TatD family'
LTQ02_RS14180	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LTQ02_RS14180	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LTQ02_RS14205	COG3078	GTPase activator activity
LTQ02_RS14230	COG3852	Histidine kinase
LTQ02_RS14240	COG0174	glutamine synthetase
LTQ02_RS14260	COG1295	ribonuclease BN
LTQ02_RS14265	COG1490	D-aminoacyl-tRNA deacylase activity
LTQ02_RS14270	COG0456	acetyltransferase
LTQ02_RS14280	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
LTQ02_RS14290	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LTQ02_RS14295	COG3031	protein transport across the cell outer membrane
LTQ02_RS14305	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LTQ02_RS14310	COG1459	type II secretion system
LTQ02_RS14315	COG2165	general secretion pathway protein
LTQ02_RS14320	COG2165	general secretion pathway protein
LTQ02_RS14325	COG2165	general secretion pathway protein
LTQ02_RS14330	COG4795	General secretion pathway protein
LTQ02_RS14335	COG3156	type II secretion system protein K
LTQ02_RS14340	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
LTQ02_RS14345	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
LTQ02_RS14365	COG0494	nUDIX hydrolase
LTQ02_RS14370	COG0316	Belongs to the HesB IscA family
LTQ02_RS14370	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
LTQ02_RS14375	COG1040	competence protein
LTQ02_RS14390	COG2183	response to ionizing radiation
LTQ02_RS14395	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LTQ02_RS14410	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LTQ02_RS14415	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LTQ02_RS14420	COG1758	RNA polymerase activity
LTQ02_RS14425	COG0194	GDP metabolic process
LTQ02_RS14430	COG2252	PERMEase
LTQ02_RS14460	COG1278	Cold shock
LTQ02_RS14465	COG1561	YicC-like family, N-terminal region
LTQ02_RS14475	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LTQ02_RS14480	COG1560	Kdo2-lipid A biosynthetic process
LTQ02_RS14485	COG1309	transcriptional regulator
LTQ02_RS14495	COG2003	Belongs to the UPF0758 family
LTQ02_RS14500	COG0227	Belongs to the bacterial ribosomal protein bL28 family
LTQ02_RS14505	COG0267	Belongs to the bacterial ribosomal protein bL33 family
LTQ02_RS14515	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
LTQ02_RS14525	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LTQ02_RS14545	COG0463	Glycosyl transferase, family 2
LTQ02_RS14550	COG0859	PFAM glycosyl transferase family 9
LTQ02_RS14555	COG3642	lipopolysaccharide core region biosynthetic process
LTQ02_RS14565	COG1086	Polysaccharide biosynthesis protein
LTQ02_RS14570	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LTQ02_RS14585	COG0107	imidazoleglycerol-phosphate synthase activity
LTQ02_RS14590	COG1083	cytidylyl-transferase
LTQ02_RS14600	COG2089	acid synthase
LTQ02_RS14610	COG1519	Transferase
LTQ02_RS14615	COG0859	PFAM glycosyl transferase family 9
LTQ02_RS14620	COG1560	Kdo2-lipid A biosynthetic process
LTQ02_RS14645	COG1045	serine acetyltransferase
LTQ02_RS14655	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
LTQ02_RS14660	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LTQ02_RS14680	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LTQ02_RS14685	COG1596	polysaccharide export
LTQ02_RS14730	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LTQ02_RS14765	COG1216	Glycosyl transferase, family 2
LTQ02_RS14765	COG1442	glycosyl transferase family 8
LTQ02_RS14770	COG0463	Glycosyl transferase, family 2
LTQ02_RS14770	COG1216	Glycosyl transferase, family 2
LTQ02_RS14800	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LTQ02_RS14810	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LTQ02_RS14820	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LTQ02_RS14825	COG0534	Mate efflux family protein
LTQ02_RS14840	COG5002	protein histidine kinase activity
LTQ02_RS14840	COG5001	Diguanylate cyclase
LTQ02_RS14840	COG3447	MASE1 domain protein
LTQ02_RS14850	COG5001	Diguanylate cyclase
LTQ02_RS14855	COG1285	pathogenesis
LTQ02_RS14860	COG1509	lysine 2,3-aminomutase activity
LTQ02_RS14865	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LTQ02_RS14875	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
LTQ02_RS14880	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LTQ02_RS14885	COG1053	succinate dehydrogenase
LTQ02_RS14900	COG0840	transmembrane signaling receptor activity
LTQ02_RS14905	COG0471	metal ion transport
LTQ02_RS14905	COG0490	domain, Protein
LTQ02_RS14915	COG1162	GTPase activity
LTQ02_RS15010	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LTQ02_RS15015	COG0802	atpase or kinase
LTQ02_RS15020	COG0860	N-Acetylmuramoyl-L-alanine amidase
LTQ02_RS15030	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LTQ02_RS15035	COG1923	regulation of RNA biosynthetic process
LTQ02_RS15040	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LTQ02_RS15045	COG0330	HflC and HflK could
LTQ02_RS15050	COG0330	HflC and HflK could
LTQ02_RS15055	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
LTQ02_RS15060	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LTQ02_RS15065	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
LTQ02_RS15070	COG0402	S-adenosylhomocysteine deaminase activity
LTQ02_RS15080	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LTQ02_RS15085	COG0360	Binds together with S18 to 16S ribosomal RNA
LTQ02_RS15095	COG0359	binds to the 23S rRNA
LTQ02_RS15110	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LTQ02_RS15120	COG0432	Pfam Uncharacterised protein family UPF0047
LTQ02_RS15125	COG0166	Belongs to the GPI family
LTQ02_RS15135	COG0735	belongs to the Fur family
LTQ02_RS15175	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LTQ02_RS15180	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LTQ02_RS15185	COG0175	sulfate reduction
LTQ02_RS15275	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
LTQ02_RS15285	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LTQ02_RS15295	COG2197	response regulator
LTQ02_RS15300	COG0629	single-stranded DNA binding
LTQ02_RS15305	COG2199	diguanylate cyclase activity
LTQ02_RS15305	COG2200	EAL domain
LTQ02_RS15330	COG3267	Type II secretory pathway component ExeA
LTQ02_RS15330	COG3409	Peptidoglycan-binding domain 1 protein
LTQ02_RS15340	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LTQ02_RS15345	COG1459	type II secretion system
LTQ02_RS15355	COG2165	general secretion pathway protein
LTQ02_RS15360	COG2165	general secretion pathway protein
LTQ02_RS15390	COG1077	Cell shape determining protein MreB Mrl
LTQ02_RS15395	COG1792	Involved in formation and maintenance of cell shape
LTQ02_RS15400	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
LTQ02_RS15405	COG0424	maF-like protein
LTQ02_RS15420	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LTQ02_RS15425	COG0312	modulator of DNA gyrase
LTQ02_RS15430	COG3385	transposase activity
LTQ02_RS15435	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
LTQ02_RS15440	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LTQ02_RS15455	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LTQ02_RS15460	COG0589	response to stress
LTQ02_RS15475	COG1438	arginine binding
LTQ02_RS15480	COG0039	L-malate dehydrogenase activity
LTQ02_RS15490	COG0142	geranyltranstransferase activity
LTQ02_RS15495	COG0261	This protein binds to 23S rRNA in the presence of protein L20
LTQ02_RS15500	COG0211	Belongs to the bacterial ribosomal protein bL27 family
LTQ02_RS15505	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LTQ02_RS15510	COG2966	Psort location CytoplasmicMembrane, score
LTQ02_RS15515	COG3610	response to peptide
LTQ02_RS15530	COG2967	ApaG domain
LTQ02_RS15535	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
LTQ02_RS15545	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LTQ02_RS15550	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
LTQ02_RS15555	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
LTQ02_RS15570	COG0066	3-isopropylmalate dehydratase activity
LTQ02_RS15580	COG0473	3-isopropylmalate dehydrogenase activity
LTQ02_RS15585	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LTQ02_RS15620	COG1022	Amp-dependent synthetase and ligase
LTQ02_RS15625	COG0028	Belongs to the TPP enzyme family
LTQ02_RS15635	COG3706	GGDEF domain
LTQ02_RS15640	COG1802	Transcriptional regulator
LTQ02_RS15645	COG0469	pyruvate kinase activity
LTQ02_RS15650	COG1349	DNA-binding transcription factor activity
LTQ02_RS15655	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
LTQ02_RS15660	COG2873	o-acetylhomoserine
LTQ02_RS15680	COG1610	YqeY-like protein
LTQ02_RS15685	COG0828	Belongs to the bacterial ribosomal protein bS21 family
LTQ02_RS15690	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LTQ02_RS15695	COG0596	Alpha beta hydrolase
LTQ02_RS15700	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
LTQ02_RS15705	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LTQ02_RS15710	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LTQ02_RS15715	COG1968	undecaprenyl-diphosphatase activity
LTQ02_RS15720	COG0617	tRNA 3'-terminal CCA addition
LTQ02_RS15725	COG3409	Peptidoglycan-binding domain 1 protein
LTQ02_RS15725	COG3267	Type II secretory pathway component ExeA
LTQ02_RS15735	COG4991	sh3 domain protein
LTQ02_RS15740	COG0306	phosphate transporter
LTQ02_RS15745	COG1392	Phosphate transport regulator
LTQ02_RS15750	COG3025	triphosphatase activity
LTQ02_RS15755	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LTQ02_RS15765	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
LTQ02_RS15770	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
LTQ02_RS15770	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
LTQ02_RS15775	COG1538	Outer membrane efflux protein
LTQ02_RS15780	COG0494	nUDIX hydrolase
LTQ02_RS15785	COG3151	Protein conserved in bacteria
LTQ02_RS15795	COG3150	esterase
LTQ02_RS15800	COG0187	DNA topoisomerase II activity
LTQ02_RS15810	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LTQ02_RS15820	COG3105	Protein conserved in bacteria
LTQ02_RS15825	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
LTQ02_RS15830	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LTQ02_RS15835	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LTQ02_RS15840	COG0723	plastoquinol--plastocyanin reductase activity
LTQ02_RS15845	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LTQ02_RS15850	COG2857	Cytochrome c1
LTQ02_RS15855	COG0625	glutathione transferase activity
LTQ02_RS15860	COG2969	positive regulation of protein catabolic process
LTQ02_RS15870	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
LTQ02_RS15885	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LTQ02_RS15895	COG0275	rRNA processing
LTQ02_RS15900	COG3116	cell division
LTQ02_RS15905	COG0768	penicillin binding
LTQ02_RS15915	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LTQ02_RS15920	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LTQ02_RS15925	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LTQ02_RS15930	COG0772	Belongs to the SEDS family
LTQ02_RS15935	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LTQ02_RS15940	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LTQ02_RS15945	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
LTQ02_RS15950	COG0849	cell division
LTQ02_RS15955	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LTQ02_RS15960	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
LTQ02_RS15965	COG0653	protein targeting
LTQ02_RS15970	COG0494	nUDIX hydrolase
LTQ02_RS15975	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
LTQ02_RS15980	COG0505	Belongs to the CarA family
LTQ02_RS15985	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
LTQ02_RS15990	COG0730	response to heat
LTQ02_RS15995	COG0583	DNA-binding transcription factor activity
LTQ02_RS16005	COG2860	membrane
LTQ02_RS16010	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LTQ02_RS16020	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LTQ02_RS16030	COG0493	'glutamate synthase
LTQ02_RS16035	COG0067	glutamate synthase
LTQ02_RS16035	COG0069	glutamate synthase activity
LTQ02_RS16035	COG0070	glutamate synthase
LTQ02_RS16045	COG0067	glutamate synthase
LTQ02_RS16045	COG0070	glutamate synthase
LTQ02_RS16045	COG0069	glutamate synthase activity
LTQ02_RS16050	COG1242	4 iron, 4 sulfur cluster binding
LTQ02_RS16055	COG2203	Gaf domain
LTQ02_RS16055	COG4251	negative regulation of phosphorylation
LTQ02_RS16055	COG3706	GGDEF domain
LTQ02_RS16055	COG5001	Diguanylate cyclase
LTQ02_RS16060	COG5002	protein histidine kinase activity
LTQ02_RS16060	COG2198	Histidine kinase
LTQ02_RS16060	COG0784	Response regulator, receiver
LTQ02_RS16070	COG0745	RESPONSE REGULATOR receiver
LTQ02_RS16075	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LTQ02_RS16090	COG0083	homoserine kinase activity
LTQ02_RS16095	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
LTQ02_RS16100	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
LTQ02_RS16105	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
LTQ02_RS16110	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LTQ02_RS16125	COG1115	amino acid carrier protein
LTQ02_RS16130	COG3022	response to hydroperoxide
LTQ02_RS16135	COG0513	Belongs to the DEAD box helicase family
LTQ02_RS16140	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
LTQ02_RS16150	COG0716	FMN binding
LTQ02_RS16155	COG4974	Belongs to the 'phage' integrase family
LTQ02_RS16160	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LTQ02_RS16165	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LTQ02_RS16175	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
LTQ02_RS16200	COG0494	nUDIX hydrolase
LTQ02_RS16210	COG0730	response to heat
LTQ02_RS16215	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LTQ02_RS16220	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LTQ02_RS16225	COG0745	RESPONSE REGULATOR receiver
LTQ02_RS16235	COG1283	sodium-dependent phosphate transmembrane transporter activity
LTQ02_RS16240	COG0583	DNA-binding transcription factor activity
LTQ02_RS16245	COG0640	Transcriptional regulator
LTQ02_RS16250	COG0268	Binds directly to 16S ribosomal RNA
LTQ02_RS16255	COG0728	peptidoglycan biosynthetic process
LTQ02_RS16260	COG0196	riboflavin kinase activity
LTQ02_RS16265	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LTQ02_RS16275	COG1047	Peptidyl-prolyl cis-trans
LTQ02_RS16280	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
LTQ02_RS16285	COG3279	Response regulator of the LytR AlgR family
LTQ02_RS16290	COG3275	phosphorelay sensor kinase activity
LTQ02_RS16295	COG1966	Carbon starvation protein
LTQ02_RS16305	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
LTQ02_RS16325	COG1605	Chorismate mutase
LTQ02_RS16325	COG0287	Prephenate dehydrogenase
LTQ02_RS16330	COG0739	heme binding
LTQ02_RS16340	COG0488	(ABC) transporter
LTQ02_RS16350	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
LTQ02_RS16355	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
LTQ02_RS16360	COG5001	Diguanylate cyclase
LTQ02_RS16365	COG0077	Prephenate dehydratase
LTQ02_RS16365	COG1605	Chorismate mutase
LTQ02_RS16370	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LTQ02_RS16375	COG0741	lytic transglycosylase activity
LTQ02_RS16380	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LTQ02_RS16385	COG0564	pseudouridine synthase activity
LTQ02_RS16440	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LTQ02_RS16450	COG2223	nitrite transmembrane transporter activity
LTQ02_RS16455	COG2815	serine threonine protein kinase
LTQ02_RS16455	COG0515	serine threonine protein kinase
LTQ02_RS16465	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ02_RS16465	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ02_RS16470	COG1105	Belongs to the carbohydrate kinase PfkB family
LTQ02_RS16475	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ02_RS16475	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ02_RS16475	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
LTQ02_RS16510	COG0745	RESPONSE REGULATOR receiver
LTQ02_RS16530	COG0625	glutathione transferase activity
LTQ02_RS16545	COG2223	nitrite transmembrane transporter activity
LTQ02_RS16590	COG1879	ABC-type sugar transport system periplasmic component
LTQ02_RS16595	COG1803	Methylglyoxal synthase
LTQ02_RS16605	COG0210	DNA helicase
LTQ02_RS16610	COG1289	transmembrane transporter activity
LTQ02_RS16630	COG0583	DNA-binding transcription factor activity
LTQ02_RS16635	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LTQ02_RS16640	COG1328	CTP reductase activity
LTQ02_RS16670	COG1011	Hydrolase
LTQ02_RS16680	COG1454	alcohol dehydrogenase
LTQ02_RS16725	COG2433	Pfam Transposase IS66
LTQ02_RS16750	COG0515	serine threonine protein kinase
LTQ02_RS16750	COG2815	serine threonine protein kinase
LTQ02_RS16795	COG1063	alcohol dehydrogenase
LTQ02_RS16800	COG0156	8-amino-7-oxononanoate synthase activity
LTQ02_RS16805	COG2200	EAL domain
LTQ02_RS16825	COG0346	lactoylglutathione lyase activity
LTQ02_RS16845	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LTQ02_RS16850	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
LTQ02_RS16865	COG0393	Putative heavy-metal-binding
LTQ02_RS16870	COG0739	heme binding
LTQ02_RS16900	COG1132	(ABC) transporter
LTQ02_RS16905	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LTQ02_RS16925	COG1760	l-serine dehydratase
LTQ02_RS16930	COG3104	oligopeptide transport
LTQ02_RS16935	COG2375	cellular response to nickel ion
LTQ02_RS16940	COG1609	Transcriptional regulator
LTQ02_RS16945	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LTQ02_RS16950	COG3265	gluconokinase activity
LTQ02_RS16955	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
LTQ02_RS16965	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
LTQ02_RS16985	COG3842	ATPase activity
LTQ02_RS16990	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LTQ02_RS16995	COG1840	ABC-type Fe3 transport system, periplasmic component
LTQ02_RS17005	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LTQ02_RS17015	COG2885	chlorophyll binding
LTQ02_RS17020	COG1765	OsmC-like protein
LTQ02_RS17025	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LTQ02_RS17025	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LTQ02_RS17030	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LTQ02_RS17035	COG0569	domain protein
LTQ02_RS17040	COG0668	transmembrane transport
LTQ02_RS17050	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LTQ02_RS17055	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LTQ02_RS17060	COG3530	Putative quorum-sensing-regulated virulence factor
LTQ02_RS17075	COG0109	protoheme IX farnesyltransferase activity
LTQ02_RS17080	COG1612	heme a metabolic process
LTQ02_RS17100	COG1845	cytochrome c oxidase, subunit III
LTQ02_RS17110	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LTQ02_RS17115	COG1565	acr, cog1565
LTQ02_RS17115	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LTQ02_RS17120	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LTQ02_RS17125	COG1280	lysine exporter protein (LysE YggA)
LTQ02_RS17130	COG0179	Fumarylacetoacetate (FAA) hydrolase
LTQ02_RS17140	COG0443	Heat shock 70 kDa protein
LTQ02_RS17170	COG2827	Endonuclease containing a URI domain
LTQ02_RS17175	COG3132	Protein of unknown function, DUF480
LTQ02_RS17185	COG2926	Belongs to the UPF0265 family
LTQ02_RS17210	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LTQ02_RS17215	COG1151	hydroxylamine reductase activity
LTQ02_RS17230	COG1280	lysine exporter protein (LysE YggA)
LTQ02_RS17245	COG0531	amino acid
LTQ02_RS17280	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
LTQ02_RS17285	COG0402	S-adenosylhomocysteine deaminase activity
LTQ02_RS17290	COG1278	Cold shock
LTQ02_RS17295	COG3706	GGDEF domain
LTQ02_RS17360	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LTQ02_RS17375	COG3037	sugar-specific permease SgaT UlaA
LTQ02_RS17380	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ02_RS17385	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
LTQ02_RS17395	COG2205	protein histidine kinase activity
LTQ02_RS17400	COG0745	RESPONSE REGULATOR receiver
LTQ02_RS17405	COG5001	Diguanylate cyclase
LTQ02_RS17415	COG5001	Diguanylate cyclase
LTQ02_RS17425	COG1131	(ABC) transporter
LTQ02_RS17445	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LTQ02_RS17445	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LTQ02_RS17465	COG2814	Major facilitator Superfamily
LTQ02_RS17520	COG4934	collagen metabolic process
LTQ02_RS17555	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ02_RS17590	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LTQ02_RS17600	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
LTQ02_RS17605	COG0737	Belongs to the 5'-nucleotidase family
LTQ02_RS17615	COG1136	(ABC) transporter
LTQ02_RS17630	COG2356	endonuclease I
LTQ02_RS17640	COG0583	DNA-binding transcription factor activity
LTQ02_RS17660	COG4166	transmembrane transport
LTQ02_RS17685	COG3833	ABC-type maltose transport systems, permease component
LTQ02_RS17690	COG1175	transmembrane transport
LTQ02_RS17700	COG3842	ATPase activity
LTQ02_RS17710	COG0840	transmembrane signaling receptor activity
LTQ02_RS17720	COG0714	Associated with various cellular activities
LTQ02_RS17735	COG2304	oxidoreductase activity
LTQ02_RS17755	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
LTQ02_RS17760	COG0581	inorganic phosphate transmembrane transporter activity
LTQ02_RS17765	COG0573	inorganic phosphate transmembrane transporter activity
LTQ02_RS17775	COG0840	transmembrane signaling receptor activity
LTQ02_RS17810	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
LTQ02_RS17815	COG3240	lipase activity
LTQ02_RS17820	COG0513	Belongs to the DEAD box helicase family
LTQ02_RS17830	COG1376	ErfK ybiS ycfS ynhG family protein
LTQ02_RS17830	COG1388	LysM domain
LTQ02_RS17835	COG0813	purine-nucleoside phosphorylase activity
LTQ02_RS17865	COG1566	PFAM secretion protein HlyD family protein
LTQ02_RS17870	COG4720	Psort location CytoplasmicMembrane, score
LTQ02_RS17875	COG1122	ATPase activity
LTQ02_RS17890	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LTQ02_RS17895	COG1640	4-alpha-glucanotransferase
LTQ02_RS17900	COG0058	SHG alpha-glucan phosphorylase activity
LTQ02_RS17905	COG2909	trisaccharide binding
LTQ02_RS17920	COG1999	signal sequence binding
LTQ02_RS17930	COG1162	GTPase activity
LTQ02_RS17935	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
LTQ02_RS17945	COG4566	intracellular signal transduction
LTQ02_RS17975	COG3258	Cytochrome c
LTQ02_RS17990	COG1053	succinate dehydrogenase
LTQ02_RS17990	COG3976	FMN-binding domain protein
LTQ02_RS18020	COG1523	belongs to the glycosyl hydrolase 13 family
LTQ02_RS18035	COG4580	involved in the transport of maltose and maltodextrins
LTQ02_RS18055	COG0204	Acyl-transferase
LTQ02_RS18060	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LTQ02_RS18070	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LTQ02_RS18075	COG4667	esterase of the alpha-beta hydrolase superfamily
LTQ02_RS18080	COG0753	catalase activity
LTQ02_RS18085	COG1929	Belongs to the glycerate kinase type-1 family
LTQ02_RS18095	COG3623	hexulose-6-phosphate isomerase
LTQ02_RS18100	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
LTQ02_RS18105	COG0561	phosphatase activity
LTQ02_RS18160	COG0583	DNA-binding transcription factor activity
LTQ02_RS18180	COG0561	phosphatase activity
LTQ02_RS18210	COG0798	PFAM Bile acid sodium symporter
LTQ02_RS18215	COG0583	DNA-binding transcription factor activity
LTQ02_RS18225	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
LTQ02_RS18225	COG3064	Membrane
LTQ02_RS18225	COG1073	alpha beta
LTQ02_RS18230	COG2994	toxin metabolic process
LTQ02_RS18255	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LTQ02_RS18260	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LTQ02_RS18265	COG1349	DNA-binding transcription factor activity
LTQ02_RS18270	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LTQ02_RS18275	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ02_RS18280	COG0583	DNA-binding transcription factor activity
LTQ02_RS18290	COG1794	racemase activity, acting on amino acids and derivatives
LTQ02_RS18310	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LTQ02_RS18325	COG0583	DNA-binding transcription factor activity
LTQ02_RS18330	COG2814	Major facilitator Superfamily
LTQ02_RS18335	COG0110	maltose O-acetyltransferase activity
LTQ02_RS18340	COG1609	Transcriptional regulator
LTQ02_RS18345	COG2723	6-phospho-beta-galactosidase activity
LTQ02_RS18350	COG0737	Belongs to the 5'-nucleotidase family
LTQ02_RS18380	COG2015	COG2015, Alkyl sulfatase and related hydrolases
LTQ02_RS18385	COG0583	DNA-binding transcription factor activity
LTQ02_RS18390	COG0534	Mate efflux family protein
LTQ02_RS18395	COG1024	Enoyl-CoA hydratase
LTQ02_RS18400	COG0300	oxidoreductase activity
LTQ02_RS18490	COG3321	synthase
LTQ02_RS18490	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ02_RS18490	COG0604	alcohol dehydrogenase
LTQ02_RS18510	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LTQ02_RS18515	COG0110	maltose O-acetyltransferase activity
LTQ02_RS18520	COG2207	Transcriptional regulator
LTQ02_RS18530	COG2188	Transcriptional regulator
LTQ02_RS18540	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LTQ02_RS18540	COG1263	PTS System
LTQ02_RS18545	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LTQ02_RS18550	COG0800	Aldolase
LTQ02_RS18555	COG1473	amidohydrolase
LTQ02_RS18570	COG2964	Protein conserved in bacteria
LTQ02_RS18575	COG0251	oxidation-reduction process
LTQ02_RS18580	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LTQ02_RS18585	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
LTQ02_RS18600	COG0628	permease
LTQ02_RS18635	COG1597	lipid kinase activity
LTQ02_RS18635	COG1803	Methylglyoxal synthase
LTQ02_RS18665	COG0527	aspartate kinase activity
LTQ02_RS18675	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LTQ02_RS18680	COG0456	acetyltransferase
LTQ02_RS18700	COG1309	transcriptional regulator
LTQ02_RS18705	COG0641	radical SAM
LTQ02_RS18735	COG1846	Transcriptional regulator
LTQ02_RS18740	COG0517	IMP dehydrogenase activity
LTQ02_RS18740	COG4175	Glycine betaine
LTQ02_RS18760	COG1012	belongs to the aldehyde dehydrogenase family
LTQ02_RS18765	COG1309	transcriptional regulator
LTQ02_RS18775	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
LTQ02_RS18785	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
LTQ02_RS18790	COG1473	amidohydrolase
LTQ02_RS18800	COG1522	sequence-specific DNA binding
LTQ02_RS18815	COG0745	RESPONSE REGULATOR receiver
LTQ02_RS18820	COG2205	protein histidine kinase activity
LTQ02_RS18840	COG0579	oxidoreductase
LTQ02_RS18855	COG2204	response regulator
LTQ02_RS18870	COG0800	Aldolase
LTQ02_RS18875	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LTQ02_RS18890	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
LTQ02_RS18920	COG2194	sulfuric ester hydrolase activity
LTQ02_RS18955	COG1132	(ABC) transporter
LTQ02_RS18960	COG4399	Belongs to the UPF0754 family
LTQ02_RS18990	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LTQ02_RS19025	COG0259	pyridoxamine-phosphate oxidase activity
LTQ02_RS19090	COG4608	Belongs to the ABC transporter superfamily
LTQ02_RS19095	COG0444	Belongs to the ABC transporter superfamily
LTQ02_RS19105	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LTQ02_RS19105	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
LTQ02_RS19145	COG3842	ATPase activity
LTQ02_RS19155	COG0745	RESPONSE REGULATOR receiver
LTQ02_RS19160	COG2205	protein histidine kinase activity
LTQ02_RS19180	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
LTQ02_RS19205	COG3186	Phenylalanine-4-hydroxylase
LTQ02_RS19220	COG0217	transcriptional regulatory protein
LTQ02_RS19235	COG2084	Dehydrogenase
LTQ02_RS19240	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LTQ02_RS19345	COG0612	Peptidase, M16
LTQ02_RS19355	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LTQ02_RS19360	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LTQ02_RS19375	COG1902	pentaerythritol trinitrate reductase activity
LTQ02_RS19380	COG2814	Major facilitator Superfamily
LTQ02_RS19385	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ02_RS19395	COG2015	COG2015, Alkyl sulfatase and related hydrolases
LTQ02_RS19420	COG0724	RNA recognition motif
LTQ02_RS19425	COG4221	oxidoreductase activity
LTQ02_RS19450	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LTQ02_RS19475	COG0415	Belongs to the DNA photolyase family
LTQ02_RS19485	COG3806	Anti-sigma factor
LTQ02_RS19490	COG1595	DNA-templated transcription, initiation
LTQ02_RS19500	COG1942	4-Oxalocrotonate Tautomerase
LTQ02_RS19515	COG0786	glutamate:sodium symporter activity
LTQ02_RS19520	COG0446	pyridine nucleotide-disulphide oxidoreductase
LTQ02_RS19540	COG2213	PTS system mannitol-specific
LTQ02_RS19540	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ02_RS19545	COG0246	Mannitol dehydrogenase
LTQ02_RS19550	COG3722	fumarate hydratase activity
LTQ02_RS19555	COG0363	glucosamine-6-phosphate deaminase activity
LTQ02_RS19575	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LTQ02_RS19590	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LTQ02_RS19600	COG3366	ferrous iron transmembrane transporter activity
LTQ02_RS19605	COG0700	Nucleoside recognition
LTQ02_RS19610	COG3788	relative of glutathione S-transferase, MAPEG superfamily
LTQ02_RS19655	COG0596	Alpha beta hydrolase
LTQ02_RS19670	COG3123	guanosine phosphorylase activity
LTQ02_RS19675	COG1741	Belongs to the pirin family
LTQ02_RS19700	COG2197	response regulator
LTQ02_RS19705	COG3851	Histidine kinase
LTQ02_RS19710	COG2271	Major facilitator Superfamily
LTQ02_RS19735	COG1054	Belongs to the UPF0176 family
LTQ02_RS19750	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LTQ02_RS19755	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LTQ02_RS19755	COG2207	Transcriptional regulator
LTQ02_RS19760	COG0534	Mate efflux family protein
LTQ02_RS19770	COG4172	Belongs to the ABC transporter superfamily
LTQ02_RS19775	COG0747	negative chemotaxis
LTQ02_RS19805	COG0583	DNA-binding transcription factor activity
LTQ02_RS19845	COG0395	ABC-type sugar transport system, permease component
LTQ02_RS19855	COG3842	ATPase activity
LTQ02_RS19860	COG3459	Glycosyltransferase 36 associated
LTQ02_RS19900	COG4172	Belongs to the ABC transporter superfamily
LTQ02_RS19910	COG1067	ATP-dependent peptidase activity
LTQ02_RS19975	COG0583	DNA-binding transcription factor activity
LTQ02_RS19985	COG1846	Transcriptional regulator
LTQ02_RS19990	COG2259	Doxx family
LTQ02_RS20005	COG3960	tartronate-semialdehyde synthase activity
LTQ02_RS20010	COG3622	Belongs to the hyi family
LTQ02_RS20015	COG2084	Dehydrogenase
LTQ02_RS20035	COG0745	RESPONSE REGULATOR receiver
LTQ02_RS20050	COG0402	S-adenosylhomocysteine deaminase activity
LTQ02_RS20075	COG2252	PERMEase
LTQ02_RS20095	COG4266	Belongs to the allantoicase family
LTQ02_RS20100	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
LTQ02_RS20115	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LTQ02_RS20130	COG0789	Transcriptional regulator
LTQ02_RS20135	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LTQ02_RS20145	COG0402	S-adenosylhomocysteine deaminase activity
LTQ02_RS20155	COG1529	Aldehyde oxidase and xanthine dehydrogenase
LTQ02_RS20180	COG1418	mRNA catabolic process
LTQ02_RS20185	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LTQ02_RS20190	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LTQ02_RS20195	COG0583	DNA-binding transcription factor activity
LTQ02_RS20200	COG1012	belongs to the aldehyde dehydrogenase family
LTQ02_RS20205	COG0596	Alpha beta hydrolase
LTQ02_RS20255	COG1263	PTS System
LTQ02_RS20255	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LTQ02_RS20260	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LTQ02_RS20265	COG1621	beta-fructofuranosidase activity
LTQ02_RS20275	COG0625	glutathione transferase activity
LTQ02_RS20285	COG0840	transmembrane signaling receptor activity
LTQ02_RS20290	COG3284	Transcriptional regulator
LTQ02_RS20295	COG1012	belongs to the aldehyde dehydrogenase family
LTQ02_RS20315	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
LTQ02_RS20320	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
LTQ02_RS20345	COG4166	transmembrane transport
LTQ02_RS20360	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ02_RS20375	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ02_RS20375	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ02_RS20375	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ02_RS20380	COG2207	Transcriptional regulator
LTQ02_RS20390	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ02_RS20395	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ02_RS20405	COG3226	Transcriptional regulator
LTQ02_RS20415	COG0702	epimerase
LTQ02_RS20425	COG0840	transmembrane signaling receptor activity
LTQ02_RS20435	COG1012	belongs to the aldehyde dehydrogenase family
LTQ02_RS20445	COG1764	response to oxidative stress
LTQ02_RS20450	COG1846	Transcriptional regulator
LTQ02_RS20455	COG0814	amino acid
LTQ02_RS20460	COG2814	Major facilitator Superfamily
LTQ02_RS20475	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LTQ02_RS20500	COG0583	DNA-binding transcription factor activity
LTQ02_RS20525	COG0583	DNA-binding transcription factor activity
LTQ02_RS20535	COG4948	Mandelate Racemase Muconate Lactonizing
LTQ02_RS20545	COG2204	response regulator
LTQ02_RS20560	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
LTQ02_RS20565	COG3639	organic phosphonate transmembrane transporter activity
LTQ02_RS20570	COG3639	organic phosphonate transmembrane transporter activity
LTQ02_RS20595	COG1288	antiporter activity
LTQ02_RS20600	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LTQ02_RS20615	COG1022	Amp-dependent synthetase and ligase
LTQ02_RS20625	COG4221	oxidoreductase activity
LTQ02_RS20630	COG0583	DNA-binding transcription factor activity
LTQ02_RS20635	COG1733	regulation of RNA biosynthetic process
LTQ02_RS20640	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ02_RS20650	COG2910	NAD(P)H-binding
LTQ02_RS20655	COG0583	DNA-binding transcription factor activity
LTQ02_RS20665	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LTQ02_RS20695	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LTQ02_RS20700	COG1595	DNA-templated transcription, initiation
LTQ02_RS20720	COG1901	pseudouridine methyltransferase
LTQ02_RS20785	COG0534	Mate efflux family protein
LTQ02_RS20795	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
LTQ02_RS20800	COG2999	glutathione oxidoreductase activity
LTQ02_RS20810	COG0673	inositol 2-dehydrogenase activity
LTQ02_RS20830	COG0584	glycerophosphoryl diester phosphodiesterase
LTQ02_RS20835	COG3842	ATPase activity
LTQ02_RS20840	COG0395	ABC-type sugar transport system, permease component
LTQ02_RS20845	COG1175	transmembrane transport
LTQ02_RS20870	COG0189	ligase activity
LTQ02_RS20870	COG4067	protein conserved in archaea
LTQ02_RS20875	COG0189	ligase activity
LTQ02_RS20880	COG4533	DNA binding
LTQ02_RS20910	COG1012	belongs to the aldehyde dehydrogenase family
LTQ02_RS20915	COG1414	Transcriptional regulator
LTQ02_RS20920	COG0280	phosphate acetyltransferase
LTQ02_RS20925	COG0730	response to heat
LTQ02_RS20955	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LTQ02_RS20960	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
LTQ02_RS20965	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
LTQ02_RS20970	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
LTQ02_RS20970	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
LTQ02_RS20985	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LTQ02_RS20995	COG2354	Protein conserved in bacteria
LTQ02_RS21000	COG0418	dihydroorotase activity
LTQ02_RS21010	COG3217	Mosc domain protein beta barrel domain protein
LTQ02_RS21010	COG0633	Ferredoxin
LTQ02_RS21015	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LTQ02_RS21060	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
LTQ02_RS21065	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LTQ02_RS21075	COG0848	biopolymer transport protein
LTQ02_RS21080	COG0811	peptide transport
LTQ02_RS21085	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
LTQ02_RS21095	COG3721	Heme iron utilization protein
LTQ02_RS21100	COG0748	coenzyme F420 binding
LTQ02_RS21105	COG2096	Adenosyltransferase
LTQ02_RS21110	COG0835	chemotaxis
LTQ02_RS21110	COG0784	Response regulator, receiver
LTQ02_RS21115	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LTQ02_RS21120	COG0366	Alpha amylase catalytic
LTQ02_RS21130	COG3314	Sporulation integral membrane protein YlbJ
LTQ02_RS21155	COG0739	heme binding
LTQ02_RS21160	COG5001	Diguanylate cyclase
LTQ02_RS21165	COG0583	DNA-binding transcription factor activity
LTQ02_RS21170	COG2814	Major facilitator Superfamily
LTQ02_RS21185	COG0697	spore germination
LTQ02_RS21205	COG3118	belongs to the thioredoxin family
LTQ02_RS21210	COG4232	protein-disulfide reductase activity
LTQ02_RS21225	COG0668	transmembrane transport
LTQ02_RS21270	COG4989	oxidoreductase activity
LTQ02_RS21275	COG0513	Belongs to the DEAD box helicase family
LTQ02_RS21290	COG2176	DNA-directed DNA polymerase activity
LTQ02_RS21300	COG0513	Belongs to the DEAD box helicase family
LTQ02_RS21305	COG0778	Nitroreductase
LTQ02_RS21310	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
LTQ02_RS21315	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
LTQ02_RS21320	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LTQ02_RS21325	COG0667	Aldo Keto reductase
LTQ02_RS21335	COG2195	Cleaves the N-terminal amino acid of tripeptides
LTQ02_RS21370	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LTQ02_RS21385	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
LTQ02_RS21390	COG0513	Belongs to the DEAD box helicase family
LTQ02_RS21395	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LTQ02_RS21410	COG1396	sequence-specific DNA binding
LTQ02_RS21415	COG3135	benzoate transporter
LTQ02_RS21470	COG0366	Alpha amylase catalytic
LTQ02_RS21480	COG0583	DNA-binding transcription factor activity
LTQ02_RS21485	COG0534	Mate efflux family protein
LTQ02_RS21515	COG0516	GMP reductase activity
LTQ02_RS21555	COG3710	Transcriptional regulator
LTQ02_RS21590	COG0697	spore germination
LTQ02_RS21595	COG0351	phosphomethylpyrimidine kinase
LTQ02_RS21600	COG1116	anion transmembrane transporter activity
LTQ02_RS21605	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LTQ02_RS21610	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LTQ02_RS21615	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LTQ02_RS21620	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
LTQ02_RS21640	COG0583	DNA-binding transcription factor activity
LTQ02_RS21655	COG0402	S-adenosylhomocysteine deaminase activity
LTQ02_RS21690	COG1566	PFAM secretion protein HlyD family protein
LTQ02_RS21700	COG0628	permease
LTQ02_RS21730	COG4607	ABC-type enterochelin transport system periplasmic component
LTQ02_RS21735	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LTQ02_RS21740	COG4605	iron ion homeostasis
LTQ02_RS21745	COG4604	ABC transporter, ATP-binding protein
LTQ02_RS21750	COG3437	response regulator, receiver
LTQ02_RS21760	COG0583	DNA-binding transcription factor activity
LTQ02_RS21765	COG2814	Major facilitator Superfamily
LTQ02_RS21785	COG1522	sequence-specific DNA binding
LTQ02_RS21790	COG0840	transmembrane signaling receptor activity
LTQ02_RS21795	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LTQ02_RS21815	COG5001	Diguanylate cyclase
LTQ02_RS21815	COG4251	negative regulation of phosphorylation
LTQ02_RS21815	COG3706	GGDEF domain
LTQ02_RS21815	COG2203	Gaf domain
LTQ02_RS21820	COG2897	thiosulfate sulfurtransferase activity
LTQ02_RS21850	COG0302	gtp cyclohydrolase
LTQ02_RS21865	COG4681	YaeQ
LTQ02_RS21870	COG1278	Cold shock
LTQ02_RS21875	COG2133	pyrroloquinoline quinone binding
LTQ02_RS21885	COG1120	ATPase activity
LTQ02_RS21915	COG1024	Enoyl-CoA hydratase
LTQ02_RS21935	COG2985	domain, Protein
LTQ02_RS21945	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LTQ02_RS21950	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LTQ02_RS21965	COG3710	Transcriptional regulator
LTQ02_RS21975	COG0446	pyridine nucleotide-disulphide oxidoreductase
LTQ02_RS21975	COG1902	pentaerythritol trinitrate reductase activity
LTQ02_RS21990	COG1132	(ABC) transporter
LTQ02_RS22015	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LTQ02_RS22020	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LTQ02_RS22050	COG2824	Alkylphosphonate utilization operon protein PhnA
LTQ02_RS22085	COG0765	amino acid transport
LTQ02_RS22090	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LTQ02_RS22095	COG0765	amino acid transport
LTQ02_RS22100	COG1126	abc transporter atp-binding protein
LTQ02_RS22105	COG1979	alcohol dehydrogenase
LTQ02_RS22110	COG2207	Transcriptional regulator
LTQ02_RS22150	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LTQ02_RS22170	COG3059	membrane
LTQ02_RS22180	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LTQ02_RS22195	COG3706	GGDEF domain
LTQ02_RS22210	COG1686	Belongs to the peptidase S11 family
LTQ02_RS22230	COG2130	NADP-dependent
LTQ02_RS22235	COG1309	transcriptional regulator
LTQ02_RS22240	COG0545	Peptidyl-prolyl cis-trans isomerase
LTQ02_RS22260	COG3604	Transcriptional regulator
LTQ02_RS22265	COG1017	nitric oxide dioxygenase activity
LTQ02_RS22265	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LTQ02_RS22280	COG0038	chloride channel
LTQ02_RS22285	COG0523	cobalamin synthesis protein
LTQ02_RS22290	COG0513	Belongs to the DEAD box helicase family
LTQ02_RS22295	COG1280	lysine exporter protein (LysE YggA)
LTQ02_RS22365	COG3005	denitrification pathway
LTQ02_RS22375	COG0243	molybdopterin cofactor binding
LTQ02_RS22385	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
LTQ02_RS22385	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LTQ02_RS22390	COG3850	Histidine kinase
LTQ02_RS22395	COG2197	response regulator
LTQ02_RS22415	COG2267	carboxylic ester hydrolase activity
LTQ02_RS22420	COG2067	long-chain fatty acid transport protein
LTQ02_RS22430	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LTQ02_RS22450	COG2188	Transcriptional regulator
LTQ02_RS22455	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ02_RS22455	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ02_RS22455	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ02_RS22460	COG0383	alpha-mannosidase activity
LTQ02_RS22465	COG1929	Belongs to the glycerate kinase type-1 family
LTQ02_RS22495	COG3706	GGDEF domain
LTQ02_RS22500	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LTQ02_RS22545	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
LTQ02_RS22550	COG0494	nUDIX hydrolase
LTQ02_RS22560	COG2425	protein containing a von Willebrand factor type A (vWA) domain
LTQ02_RS22585	COG0840	transmembrane signaling receptor activity
LTQ02_RS22620	COG2990	Protein conserved in bacteria
LTQ02_RS22635	COG0848	biopolymer transport protein
LTQ02_RS22680	COG1595	DNA-templated transcription, initiation
LTQ02_RS22690	COG1858	cytochrome C peroxidase
LTQ02_RS22695	COG1858	cytochrome C peroxidase
LTQ02_RS22705	COG0243	molybdopterin cofactor binding
LTQ02_RS22720	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LTQ02_RS22730	COG2116	formate transmembrane transporter activity
LTQ02_RS22735	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LTQ02_RS22735	COG1648	precorrin-2 dehydrogenase activity
LTQ02_RS22750	COG0745	RESPONSE REGULATOR receiver
LTQ02_RS22755	COG2205	protein histidine kinase activity
LTQ02_RS22760	COG1301	dicarboxylic acid transport
LTQ02_RS22765	COG4774	siderophore transport
LTQ02_RS22775	COG0811	peptide transport
LTQ02_RS22780	COG0811	peptide transport
LTQ02_RS22785	COG0848	biopolymer transport protein
LTQ02_RS22830	COG0803	Belongs to the bacterial solute-binding protein 9 family
LTQ02_RS22835	COG1121	(ABC) transporter
LTQ02_RS22840	COG1321	iron dependent repressor
LTQ02_RS22840	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LTQ02_RS22865	COG0534	Mate efflux family protein
LTQ02_RS22895	COG0318	PFAM AMP-dependent synthetase and ligase
LTQ02_RS22905	COG3118	belongs to the thioredoxin family
LTQ02_RS22910	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LTQ02_RS22930	COG2391	methyltransferase activity
LTQ02_RS22940	COG1328	CTP reductase activity
LTQ02_RS22945	COG0602	queuosine metabolic process
LTQ02_RS22955	COG0189	ligase activity
LTQ02_RS22955	COG4067	protein conserved in archaea
LTQ02_RS22960	COG0488	(ABC) transporter
LTQ02_RS22980	COG0725	ABC transporter, periplasmic molybdate-binding protein
LTQ02_RS22985	COG4149	molybdate abc transporter
LTQ02_RS22990	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
LTQ02_RS23000	COG5001	Diguanylate cyclase
LTQ02_RS23000	COG4251	negative regulation of phosphorylation
LTQ02_RS23000	COG3706	GGDEF domain
LTQ02_RS23000	COG2203	Gaf domain
LTQ02_RS23010	COG3706	GGDEF domain
LTQ02_RS23025	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
LTQ02_RS23030	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
LTQ02_RS23055	COG3140	Belongs to the UPF0181 family
LTQ02_RS23060	COG3706	GGDEF domain
LTQ02_RS23085	COG0023	Translation Initiation Factor
LTQ02_RS23100	COG1181	Belongs to the D-alanine--D-alanine ligase family
LTQ02_RS23105	COG3266	domain, Protein
LTQ02_RS23110	COG0045	succinate-CoA ligase (ADP-forming) activity
LTQ02_RS23110	COG1042	CoA-binding domain protein
LTQ02_RS23110	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LTQ02_RS23115	COG0583	DNA-binding transcription factor activity
LTQ02_RS23120	COG1629	transport
LTQ02_RS23120	COG4771	TonB-dependent receptor
LTQ02_RS23150	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LTQ02_RS23155	COG1984	allophanate hydrolase subunit 2
LTQ02_RS23165	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
LTQ02_RS23170	COG4181	ATPase activity
LTQ02_RS23180	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
LTQ02_RS23185	COG1716	ATPase activity
LTQ02_RS23185	COG5001	Diguanylate cyclase
LTQ02_RS23195	COG0768	penicillin binding
LTQ02_RS23225	COG4533	DNA binding
LTQ02_RS23235	COG2050	protein possibly involved in aromatic compounds catabolism
LTQ02_RS23240	COG0501	Belongs to the peptidase M48B family
LTQ02_RS23255	COG2267	carboxylic ester hydrolase activity
LTQ02_RS23285	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
LTQ02_RS23295	COG2985	domain, Protein
LTQ02_RS23340	COG0513	Belongs to the DEAD box helicase family
LTQ02_RS23355	COG0861	Integral membrane protein TerC family
LTQ02_RS23360	COG0737	Belongs to the 5'-nucleotidase family
LTQ02_RS23365	COG3593	DNA synthesis involved in DNA repair
LTQ02_RS23375	COG0583	DNA-binding transcription factor activity
LTQ02_RS23380	COG2116	formate transmembrane transporter activity
LTQ02_RS23385	COG2353	YceI-like domain
LTQ02_RS23390	COG3038	cytochrome b561
LTQ02_RS23405	COG2200	EAL domain
LTQ02_RS23430	COG0513	Belongs to the DEAD box helicase family
LTQ02_RS23435	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
LTQ02_RS23440	COG0814	amino acid
LTQ02_RS23445	COG0840	transmembrane signaling receptor activity
LTQ02_RS23450	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LTQ02_RS23455	COG3437	response regulator, receiver
LTQ02_RS23455	COG0784	Response regulator, receiver
LTQ02_RS23470	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LTQ02_RS23475	COG2759	Belongs to the formate--tetrahydrofolate ligase family
LTQ02_RS23480	COG3706	GGDEF domain
LTQ02_RS23485	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LTQ02_RS23525	COG0509	glycine decarboxylation via glycine cleavage system
LTQ02_RS23545	COG0534	Mate efflux family protein
LTQ02_RS23570	COG1280	lysine exporter protein (LysE YggA)
LTQ02_RS23590	COG3227	Zinc metalloprotease (Elastase)
LTQ02_RS23615	COG2807	transmembrane transport
LTQ02_RS23625	COG1881	PFAM PEBP family protein
LTQ02_RS23630	COG5002	protein histidine kinase activity
LTQ02_RS23695	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LTQ02_RS23700	COG2205	protein histidine kinase activity
LTQ02_RS23700	COG0784	Response regulator, receiver
LTQ02_RS23705	COG1538	Outer membrane efflux protein
LTQ02_RS23710	COG1132	(ABC) transporter
LTQ02_RS23750	COG0840	transmembrane signaling receptor activity
LTQ02_RS23755	COG0405	Gamma-glutamyltransferase
LTQ02_RS23765	COG0641	radical SAM
LTQ02_RS23790	COG3300	MHYT domain
LTQ02_RS23790	COG5001	Diguanylate cyclase
LTQ02_RS23795	COG0583	DNA-binding transcription factor activity
LTQ02_RS23825	COG0714	Associated with various cellular activities
LTQ02_RS23835	COG3119	arylsulfatase activity
LTQ02_RS23840	COG3119	arylsulfatase activity
LTQ02_RS23855	COG3385	transposase activity
LTQ02_RS23860	COG0784	Response regulator, receiver
LTQ02_RS23860	COG2205	protein histidine kinase activity
LTQ02_RS23870	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
LTQ02_RS23885	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LTQ02_RS23890	COG2197	response regulator
LTQ02_RS23905	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
LTQ02_RS23935	COG0384	phenazine biosynthesis protein PhzF
LTQ02_RS23940	COG1280	lysine exporter protein (LysE YggA)
LTQ02_RS23950	COG5001	Diguanylate cyclase
LTQ02_RS23950	COG3300	MHYT domain
LTQ02_RS23970	COG3278	Belongs to the heme-copper respiratory oxidase family
LTQ02_RS24010	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LTQ02_RS24020	COG1012	belongs to the aldehyde dehydrogenase family
LTQ02_RS24030	COG0583	DNA-binding transcription factor activity
LTQ02_RS24040	COG0356	it plays a direct role in the translocation of protons across the membrane
LTQ02_RS24055	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LTQ02_RS24065	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LTQ02_RS24075	COG0355	proton-transporting ATP synthase activity, rotational mechanism
LTQ02_RS24085	COG0583	DNA-binding transcription factor activity
LTQ02_RS24095	COG2205	protein histidine kinase activity
LTQ02_RS24095	COG0784	Response regulator, receiver
LTQ02_RS24100	COG0745	RESPONSE REGULATOR receiver
LTQ02_RS24115	COG4608	Belongs to the ABC transporter superfamily
LTQ02_RS24120	COG0444	Belongs to the ABC transporter superfamily
LTQ02_RS24125	COG4166	transmembrane transport
LTQ02_RS24135	COG4174	ABC transporter (Permease)
LTQ02_RS24140	COG4172	Belongs to the ABC transporter superfamily
LTQ02_RS24145	COG4239	(ABC) transporter, permease
LTQ02_RS24150	COG4174	ABC transporter (Permease)
LTQ02_RS24155	COG4166	transmembrane transport
LTQ02_RS24175	COG1869	D-ribose catabolic process
LTQ02_RS24180	COG1129	ABC transporter
LTQ02_RS24185	COG1172	Belongs to the binding-protein-dependent transport system permease family
LTQ02_RS24190	COG1879	ABC-type sugar transport system periplasmic component
LTQ02_RS24195	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LTQ02_RS24200	COG1609	Transcriptional regulator
LTQ02_RS24230	COG0583	DNA-binding transcription factor activity
LTQ02_RS24275	COG2026	Addiction module toxin, RelE StbE family