locus-tag	class	description
JCM16456_RS00005	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JCM16456_RS00015	COG0706	membrane insertase activity
JCM16456_RS00020	COG0594	ribonuclease P activity
JCM16456_RS00025	COG0230	Belongs to the bacterial ribosomal protein bL34 family
JCM16456_RS00030	COG1126	abc transporter atp-binding protein
JCM16456_RS00050	COG0592	DNA-directed DNA polymerase activity
JCM16456_RS00055	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JCM16456_RS00060	COG0187	DNA topoisomerase II activity
JCM16456_RS00065	COG0071	Belongs to the small heat shock protein (HSP20) family
JCM16456_RS00070	COG3977	Valine--pyruvate aminotransferase
JCM16456_RS00075	COG0751	glycine-tRNA ligase activity
JCM16456_RS00080	COG0752	glycyl-tRNA synthetase alpha subunit
JCM16456_RS00085	COG2119	membrane
JCM16456_RS00105	COG0129	dihydroxy-acid dehydratase activity
JCM16456_RS00110	COG3978	acetolactate synthase activity
JCM16456_RS00120	COG0606	chelatase, subunit chli
JCM16456_RS00125	COG0204	Acyl-transferase
JCM16456_RS00130	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JCM16456_RS00135	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JCM16456_RS00140	COG3084	Protein conserved in bacteria
JCM16456_RS00150	COG1272	protein, Hemolysin III
JCM16456_RS00160	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JCM16456_RS00165	COG0569	domain protein
JCM16456_RS00170	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JCM16456_RS00170	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JCM16456_RS00185	COG0758	DNA mediated transformation
JCM16456_RS00190	COG2922	Belongs to the Smg family
JCM16456_RS00195	COG0551	DNA topoisomerase type I activity
JCM16456_RS00200	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JCM16456_RS00205	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JCM16456_RS00215	COG0408	coproporphyrinogen oxidase activity
JCM16456_RS00230	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JCM16456_RS00270	COG0583	DNA-binding transcription factor activity
JCM16456_RS00275	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
JCM16456_RS00280	COG2960	long-chain fatty acid transporting porin activity
JCM16456_RS00285	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JCM16456_RS00290	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JCM16456_RS00295	COG0210	DNA helicase
JCM16456_RS00330	COG4166	transmembrane transport
JCM16456_RS00340	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JCM16456_RS00355	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JCM16456_RS00360	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JCM16456_RS00365	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JCM16456_RS00370	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
JCM16456_RS00375	COG0339	signal peptide processing
JCM16456_RS00390	COG0210	DNA helicase
JCM16456_RS00395	COG0405	Gamma-glutamyltransferase
JCM16456_RS00405	COG2207	Transcriptional regulator
JCM16456_RS00405	COG4753	response regulator
JCM16456_RS00410	COG2962	Rard protein
JCM16456_RS00415	COG0514	ATP-dependent DNA helicase (RecQ)
JCM16456_RS00425	COG1132	(ABC) transporter
JCM16456_RS00430	COG1120	ATPase activity
JCM16456_RS00435	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
JCM16456_RS00470	COG2207	Transcriptional regulator
JCM16456_RS00475	COG1561	YicC-like family, N-terminal region
JCM16456_RS00480	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
JCM16456_RS00490	COG1560	Kdo2-lipid A biosynthetic process
JCM16456_RS00495	COG1309	transcriptional regulator
JCM16456_RS00500	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JCM16456_RS00510	COG2003	Belongs to the UPF0758 family
JCM16456_RS00520	COG0267	Belongs to the bacterial ribosomal protein bL33 family
JCM16456_RS00540	COG1442	glycosyl transferase family 8
JCM16456_RS00560	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JCM16456_RS00565	COG0297	glycogen (starch) synthase activity
JCM16456_RS00570	COG0463	Glycosyl transferase, family 2
JCM16456_RS00575	COG0859	PFAM glycosyl transferase family 9
JCM16456_RS00580	COG3642	lipopolysaccharide core region biosynthetic process
JCM16456_RS00585	COG3083	sulfuric ester hydrolase activity
JCM16456_RS00590	COG1519	Transferase
JCM16456_RS00600	COG0438	transferase activity, transferring glycosyl groups
JCM16456_RS00615	COG0859	PFAM glycosyl transferase family 9
JCM16456_RS00620	COG1560	Kdo2-lipid A biosynthetic process
JCM16456_RS00660	COG1215	transferase activity, transferring glycosyl groups
JCM16456_RS00670	COG0438	transferase activity, transferring glycosyl groups
JCM16456_RS00690	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JCM16456_RS00700	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JCM16456_RS00720	COG1596	polysaccharide export
JCM16456_RS00735	COG1088	dTDP-glucose 4,6-dehydratase activity
JCM16456_RS00750	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JCM16456_RS00775	COG0438	transferase activity, transferring glycosyl groups
JCM16456_RS00780	COG1216	Glycosyl transferase, family 2
JCM16456_RS00785	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JCM16456_RS00795	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
JCM16456_RS00810	COG1051	belongs to the nudix hydrolase family
JCM16456_RS00825	COG1482	cell wall glycoprotein biosynthetic process
JCM16456_RS00830	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JCM16456_RS00830	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JCM16456_RS00830	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JCM16456_RS00835	COG2207	Transcriptional regulator
JCM16456_RS00840	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JCM16456_RS00845	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JCM16456_RS00850	COG1088	dTDP-glucose 4,6-dehydratase activity
JCM16456_RS00870	COG1216	Glycosyl transferase, family 2
JCM16456_RS00900	COG0438	transferase activity, transferring glycosyl groups
JCM16456_RS00905	COG2877	3-deoxy-8-phosphooctulonate synthase activity
JCM16456_RS00910	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
JCM16456_RS00915	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
JCM16456_RS00915	COG0517	IMP dehydrogenase activity
JCM16456_RS00935	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
JCM16456_RS00940	COG2852	Protein conserved in bacteria
JCM16456_RS00955	COG1566	PFAM secretion protein HlyD family protein
JCM16456_RS00960	COG1289	transmembrane transporter activity
JCM16456_RS00995	COG1573	uracil-dna glycosylase
JCM16456_RS01000	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JCM16456_RS01010	COG2190	(PTS) system
JCM16456_RS01010	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCM16456_RS01010	COG1263	PTS System
JCM16456_RS01015	COG3711	transcriptional antiterminator
JCM16456_RS01035	COG1253	flavin adenine dinucleotide binding
JCM16456_RS01040	COG0776	regulation of translation
JCM16456_RS01050	COG0151	Belongs to the GarS family
JCM16456_RS01055	COG0138	bifunctional purine biosynthesis protein purh
JCM16456_RS01060	COG0789	Transcriptional regulator
JCM16456_RS01065	COG0840	transmembrane signaling receptor activity
JCM16456_RS01070	COG1653	transport
JCM16456_RS01075	COG2814	Major facilitator Superfamily
JCM16456_RS01080	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
JCM16456_RS01085	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JCM16456_RS01095	COG4145	pantothenate transmembrane transporter activity
JCM16456_RS01105	COG0439	Biotin carboxylase
JCM16456_RS01110	COG0511	ligase activity, forming carbon-carbon bonds
JCM16456_RS01115	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
JCM16456_RS01120	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JCM16456_RS01135	COG2814	Major facilitator Superfamily
JCM16456_RS01145	COG0248	Ppx GppA phosphatase
JCM16456_RS01150	COG0513	Belongs to the DEAD box helicase family
JCM16456_RS01155	COG3118	belongs to the thioredoxin family
JCM16456_RS01170	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JCM16456_RS01235	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JCM16456_RS01245	COG0812	UDP-N-acetylmuramate dehydrogenase activity
JCM16456_RS01255	COG1072	(Pantothenic acid kinase))
JCM16456_RS01285	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JCM16456_RS01290	COG0250	Participates in transcription elongation, termination and antitermination
JCM16456_RS01295	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
JCM16456_RS01305	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JCM16456_RS01315	COG0085	RNA polymerase activity
JCM16456_RS01320	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JCM16456_RS01325	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
JCM16456_RS01330	COG2816	NAD+ diphosphatase activity
JCM16456_RS01335	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
JCM16456_RS01350	COG4942	peptidase
JCM16456_RS01355	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JCM16456_RS01365	COG0688	phosphatidylethanolamine metabolic process
JCM16456_RS01370	COG1162	GTPase activity
JCM16456_RS01375	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
JCM16456_RS01440	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JCM16456_RS01445	COG0802	atpase or kinase
JCM16456_RS01450	COG0860	N-Acetylmuramoyl-L-alanine amidase
JCM16456_RS01455	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JCM16456_RS01465	COG1923	regulation of RNA biosynthetic process
JCM16456_RS01470	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JCM16456_RS01475	COG0330	HflC and HflK could
JCM16456_RS01480	COG0330	HflC and HflK could
JCM16456_RS01485	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
JCM16456_RS01500	COG0545	Peptidyl-prolyl cis-trans isomerase
JCM16456_RS01505	COG2964	Protein conserved in bacteria
JCM16456_RS01510	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
JCM16456_RS01515	COG2923	Belongs to the DsrF TusC family
JCM16456_RS01530	COG0049	tRNA binding
JCM16456_RS01535	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JCM16456_RS01545	COG2906	2 iron, 2 sulfur cluster binding
JCM16456_RS01555	COG0360	Binds together with S18 to 16S ribosomal RNA
JCM16456_RS01560	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JCM16456_RS01565	COG0359	binds to the 23S rRNA
JCM16456_RS01570	COG3137	Salt-induced outer membrane protein
JCM16456_RS01580	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JCM16456_RS01585	COG0432	Pfam Uncharacterised protein family UPF0047
JCM16456_RS01600	COG0735	belongs to the Fur family
JCM16456_RS01605	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JCM16456_RS01635	COG0175	sulfate reduction
JCM16456_RS01695	COG0527	aspartate kinase activity
JCM16456_RS01700	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JCM16456_RS01710	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JCM16456_RS01725	COG0629	single-stranded DNA binding
JCM16456_RS01745	COG2200	EAL domain
JCM16456_RS01745	COG2199	diguanylate cyclase activity
JCM16456_RS01770	COG3267	Type II secretory pathway component ExeA
JCM16456_RS01770	COG3409	Peptidoglycan-binding domain 1 protein
JCM16456_RS01785	COG1459	type II secretion system
JCM16456_RS01830	COG1077	Cell shape determining protein MreB Mrl
JCM16456_RS01835	COG1792	Involved in formation and maintenance of cell shape
JCM16456_RS01840	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
JCM16456_RS01845	COG0424	maF-like protein
JCM16456_RS01850	COG1530	ribonuclease E activity
JCM16456_RS01855	COG3164	Protein of unknown function
JCM16456_RS01860	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JCM16456_RS01865	COG0312	modulator of DNA gyrase
JCM16456_RS01885	COG2358	TRAP transporter, solute receptor (TAXI family
JCM16456_RS01900	COG0142	geranyltranstransferase activity
JCM16456_RS01905	COG0261	This protein binds to 23S rRNA in the presence of protein L20
JCM16456_RS01915	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JCM16456_RS01920	COG2966	Psort location CytoplasmicMembrane, score
JCM16456_RS01925	COG3610	response to peptide
JCM16456_RS01935	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
JCM16456_RS01950	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
JCM16456_RS01960	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
JCM16456_RS01965	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
JCM16456_RS02015	COG0741	lytic transglycosylase activity
JCM16456_RS02020	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
JCM16456_RS02035	COG2066	Belongs to the glutaminase family
JCM16456_RS02040	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JCM16456_RS02045	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JCM16456_RS02055	COG0762	integral membrane protein
JCM16456_RS02060	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JCM16456_RS02065	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JCM16456_RS02075	COG2805	Type II/IV secretion system protein
JCM16456_RS02080	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JCM16456_RS02085	COG1678	Uncharacterized ACR, COG1678
JCM16456_RS02090	COG0189	ligase activity
JCM16456_RS02095	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JCM16456_RS02100	COG2356	endonuclease I
JCM16456_RS02115	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JCM16456_RS02120	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JCM16456_RS02125	COG4771	TonB-dependent receptor
JCM16456_RS02130	COG0583	DNA-binding transcription factor activity
JCM16456_RS02135	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JCM16456_RS02140	COG0126	phosphoglycerate kinase activity
JCM16456_RS02145	COG0191	fructose-bisphosphate aldolase activity
JCM16456_RS02150	COG0668	transmembrane transport
JCM16456_RS02170	COG3706	GGDEF domain
JCM16456_RS02175	COG0469	pyruvate kinase activity
JCM16456_RS02180	COG1349	DNA-binding transcription factor activity
JCM16456_RS02185	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JCM16456_RS02195	COG0583	DNA-binding transcription factor activity
JCM16456_RS02200	COG0778	Nitroreductase
JCM16456_RS02210	COG0583	DNA-binding transcription factor activity
JCM16456_RS02225	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
JCM16456_RS02230	COG0651	ATP synthesis coupled electron transport
JCM16456_RS02235	COG0650	Formate hydrogenlyase subunit 4
JCM16456_RS02240	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JCM16456_RS02245	COG4237	Hydrogenase 4 membrane
JCM16456_RS02250	COG0651	ATP synthesis coupled electron transport
JCM16456_RS02255	COG3261	NADH dehydrogenase
JCM16456_RS02255	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
JCM16456_RS02260	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JCM16456_RS02265	COG3260	NADH ubiquinone oxidoreductase 20
JCM16456_RS02275	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
JCM16456_RS02280	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
JCM16456_RS02285	COG3383	formate dehydrogenase (NAD+) activity
JCM16456_RS02300	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
JCM16456_RS02305	COG0298	carbon dioxide binding
JCM16456_RS02325	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
JCM16456_RS02335	COG1012	belongs to the aldehyde dehydrogenase family
JCM16456_RS02340	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JCM16456_RS02345	COG0625	glutathione transferase activity
JCM16456_RS02365	COG3550	peptidyl-serine autophosphorylation
JCM16456_RS02390	COG1610	YqeY-like protein
JCM16456_RS02395	COG0828	Belongs to the bacterial ribosomal protein bS21 family
JCM16456_RS02400	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JCM16456_RS02410	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
JCM16456_RS02415	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JCM16456_RS02420	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JCM16456_RS02425	COG1968	undecaprenyl-diphosphatase activity
JCM16456_RS02430	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
JCM16456_RS02435	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
JCM16456_RS02445	COG0585	pseudouridine synthase activity
JCM16456_RS02450	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
JCM16456_RS02460	COG4942	peptidase
JCM16456_RS02460	COG1388	LysM domain
JCM16456_RS02465	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JCM16456_RS02470	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JCM16456_RS02475	COG1546	Belongs to the CinA family
JCM16456_RS02480	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JCM16456_RS02485	COG2137	regulation of response to DNA damage stimulus
JCM16456_RS02490	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JCM16456_RS02545	COG3630	sodium ion export across plasma membrane
JCM16456_RS02550	COG0511	ligase activity, forming carbon-carbon bonds
JCM16456_RS02550	COG5016	pyruvate
JCM16456_RS02555	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
JCM16456_RS02560	COG0604	alcohol dehydrogenase
JCM16456_RS02565	COG1238	metal cluster binding
JCM16456_RS02570	COG0612	Peptidase, M16
JCM16456_RS02575	COG2918	glutathione biosynthetic process
JCM16456_RS02585	COG1854	S-ribosylhomocysteine lyase activity
JCM16456_RS02590	COG4536	flavin adenine dinucleotide binding
JCM16456_RS02595	COG4137	Cytochrome C assembly protein
JCM16456_RS02600	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JCM16456_RS02610	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JCM16456_RS02615	COG0336	Belongs to the RNA methyltransferase TrmD family
JCM16456_RS02620	COG0335	large ribosomal subunit rRNA binding
JCM16456_RS02625	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JCM16456_RS02635	COG3105	Protein conserved in bacteria
JCM16456_RS02640	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
JCM16456_RS02650	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
JCM16456_RS02655	COG0723	plastoquinol--plastocyanin reductase activity
JCM16456_RS02660	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
JCM16456_RS02665	COG2857	Cytochrome c1
JCM16456_RS02670	COG0625	glutathione transferase activity
JCM16456_RS02675	COG2969	positive regulation of protein catabolic process
JCM16456_RS02680	COG2823	Periplasmic or secreted lipoprotein
JCM16456_RS02685	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
JCM16456_RS02690	COG0792	nuclease activity
JCM16456_RS02695	COG3107	peptidoglycan biosynthetic process
JCM16456_RS02700	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JCM16456_RS02710	COG0275	rRNA processing
JCM16456_RS02715	COG3116	cell division
JCM16456_RS02720	COG0768	penicillin binding
JCM16456_RS02725	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JCM16456_RS02730	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JCM16456_RS02740	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JCM16456_RS02745	COG0772	Belongs to the SEDS family
JCM16456_RS02755	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JCM16456_RS02760	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
JCM16456_RS02765	COG0849	cell division
JCM16456_RS02770	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JCM16456_RS02775	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
JCM16456_RS02780	COG0653	protein targeting
JCM16456_RS02795	COG0505	Belongs to the CarA family
JCM16456_RS02800	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
JCM16456_RS02805	COG0730	response to heat
JCM16456_RS02810	COG0583	DNA-binding transcription factor activity
JCM16456_RS02815	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
JCM16456_RS02820	COG2860	membrane
JCM16456_RS02825	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JCM16456_RS02830	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
JCM16456_RS02835	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JCM16456_RS02845	COG0493	'glutamate synthase
JCM16456_RS02850	COG0069	glutamate synthase activity
JCM16456_RS02850	COG0070	glutamate synthase
JCM16456_RS02850	COG0067	glutamate synthase
JCM16456_RS02855	COG1242	4 iron, 4 sulfur cluster binding
JCM16456_RS02870	COG1454	alcohol dehydrogenase
JCM16456_RS02870	COG1012	belongs to the aldehyde dehydrogenase family
JCM16456_RS02875	COG0784	Response regulator, receiver
JCM16456_RS02875	COG5002	protein histidine kinase activity
JCM16456_RS02875	COG2198	Histidine kinase
JCM16456_RS02885	COG0745	RESPONSE REGULATOR receiver
JCM16456_RS02895	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
JCM16456_RS02910	COG0083	homoserine kinase activity
JCM16456_RS02915	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
JCM16456_RS02920	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
JCM16456_RS02930	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JCM16456_RS02945	COG1115	amino acid carrier protein
JCM16456_RS02955	COG0084	hydrolase, TatD family'
JCM16456_RS02980	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JCM16456_RS02985	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JCM16456_RS02990	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
JCM16456_RS02995	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
JCM16456_RS03000	COG0813	purine-nucleoside phosphorylase activity
JCM16456_RS03010	COG0560	Phosphoserine phosphatase
JCM16456_RS03020	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JCM16456_RS03025	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JCM16456_RS03030	COG1022	Amp-dependent synthetase and ligase
JCM16456_RS03035	COG2199	diguanylate cyclase activity
JCM16456_RS03035	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
JCM16456_RS03040	COG2017	converts alpha-aldose to the beta-anomer
JCM16456_RS03055	COG0569	domain protein
JCM16456_RS03055	COG0189	ligase activity
JCM16456_RS03065	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JCM16456_RS03070	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
JCM16456_RS03075	COG2171	N-acyltransferase activity
JCM16456_RS03080	COG3141	response to X-ray
JCM16456_RS03090	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
JCM16456_RS03095	COG1074	ATP-dependent DNA helicase activity
JCM16456_RS03100	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JCM16456_RS03110	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
JCM16456_RS03110	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
JCM16456_RS03120	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
JCM16456_RS03125	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JCM16456_RS03130	COG2166	iron-sulfur cluster assembly
JCM16456_RS03135	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JCM16456_RS03140	COG0693	protein deglycase activity
JCM16456_RS03145	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JCM16456_RS03150	COG3248	Nucleoside-binding outer membrane protein
JCM16456_RS03160	COG1595	DNA-templated transcription, initiation
JCM16456_RS03175	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JCM16456_RS03190	COG0271	Belongs to the BolA IbaG family
JCM16456_RS03195	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JCM16456_RS03200	COG1805	sodium ion transport
JCM16456_RS03205	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JCM16456_RS03220	COG2871	sodium ion transport
JCM16456_RS03225	COG1477	protein flavinylation
JCM16456_RS03240	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JCM16456_RS03250	COG0733	neurotransmitter:sodium symporter activity
JCM16456_RS03260	COG0189	ligase activity
JCM16456_RS03265	COG4067	protein conserved in archaea
JCM16456_RS03265	COG0189	ligase activity
JCM16456_RS03270	COG2195	Cleaves the N-terminal amino acid of tripeptides
JCM16456_RS03280	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JCM16456_RS03285	COG2252	PERMEase
JCM16456_RS03290	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
JCM16456_RS03305	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JCM16456_RS03310	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JCM16456_RS03315	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JCM16456_RS03320	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JCM16456_RS03320	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JCM16456_RS03335	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
JCM16456_RS03340	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JCM16456_RS03345	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
JCM16456_RS03350	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JCM16456_RS03360	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
JCM16456_RS03365	COG0024	Methionine aminopeptidase
JCM16456_RS03370	COG0052	Belongs to the universal ribosomal protein uS2 family
JCM16456_RS03375	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JCM16456_RS03380	COG0528	UMP kinase activity
JCM16456_RS03385	COG0233	cytoplasmic translational termination
JCM16456_RS03390	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JCM16456_RS03395	COG0575	Belongs to the CDS family
JCM16456_RS03400	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
JCM16456_RS03405	COG0750	zinc metalloprotease
JCM16456_RS03410	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JCM16456_RS03415	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
JCM16456_RS03420	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JCM16456_RS03425	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JCM16456_RS03430	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JCM16456_RS03435	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JCM16456_RS03440	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JCM16456_RS03445	COG0587	DNA-directed DNA polymerase activity
JCM16456_RS03450	COG0825	malonyl-CoA metabolic process
JCM16456_RS03455	COG0037	tRNA processing
JCM16456_RS03465	COG0347	Belongs to the P(II) protein family
JCM16456_RS03470	COG3021	interspecies interaction between organisms
JCM16456_RS03475	COG0741	lytic transglycosylase activity
JCM16456_RS03475	COG1388	LysM domain
JCM16456_RS03480	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JCM16456_RS03485	COG2226	methyltransferase
JCM16456_RS03495	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JCM16456_RS03505	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
JCM16456_RS03510	COG0121	glutamine amidotransferase
JCM16456_RS03515	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JCM16456_RS03520	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
JCM16456_RS03525	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JCM16456_RS03530	COG1187	pseudouridine synthase activity
JCM16456_RS03535	COG2840	Smr protein MutS2
JCM16456_RS03545	COG3735	TraB family
JCM16456_RS03550	COG2608	mercury ion transmembrane transporter activity
JCM16456_RS03550	COG2217	Heavy metal translocating P-type atpase
JCM16456_RS03555	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JCM16456_RS03565	COG1609	Transcriptional regulator
JCM16456_RS03585	COG3842	ATPase activity
JCM16456_RS03620	COG2747	anti-sigma28 factor FlgM
JCM16456_RS03630	COG0784	Response regulator, receiver
JCM16456_RS03630	COG0835	chemotaxis
JCM16456_RS03635	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
JCM16456_RS03640	COG1815	bacterial-type flagellum-dependent cell motility
JCM16456_RS03660	COG4787	bacterial-type flagellum-dependent cell motility
JCM16456_RS03670	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
JCM16456_RS03675	COG1706	bacterial-type flagellum-dependent cell motility
JCM16456_RS03680	COG3951	Flagellar rod assembly protein muramidase FlgJ
JCM16456_RS03680	COG1705	Flagellar rod assembly protein muramidase FlgJ
JCM16456_RS03690	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JCM16456_RS03695	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JCM16456_RS03795	COG0193	aminoacyl-tRNA hydrolase activity
JCM16456_RS03800	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JCM16456_RS03810	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
JCM16456_RS03815	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
JCM16456_RS03820	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JCM16456_RS03825	COG2890	protein-(glutamine-N5) methyltransferase activity
JCM16456_RS03830	COG3094	Invasion gene expression up-regulator, SirB
JCM16456_RS03835	COG2912	Transglutaminase-like superfamily
JCM16456_RS03840	COG2877	3-deoxy-8-phosphooctulonate synthase activity
JCM16456_RS03845	COG0737	Belongs to the 5'-nucleotidase family
JCM16456_RS03870	COG1393	Belongs to the ArsC family
JCM16456_RS03875	COG4783	chaperone-mediated protein folding
JCM16456_RS03890	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JCM16456_RS03900	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JCM16456_RS03905	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
JCM16456_RS03915	COG1876	peptidase activity
JCM16456_RS03925	COG1393	Belongs to the ArsC family
JCM16456_RS03945	COG2837	iron assimilation
JCM16456_RS03950	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JCM16456_RS03965	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JCM16456_RS03970	COG1334	flagellar protein FlaG
JCM16456_RS03975	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
JCM16456_RS03985	COG1516	flagellar protein fliS
JCM16456_RS03995	COG4191	Histidine kinase
JCM16456_RS04005	COG1677	Flagellar hook-basal body complex protein FliE
JCM16456_RS04015	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JCM16456_RS04065	COG1987	bacterial-type flagellum assembly
JCM16456_RS04070	COG1684	flagellar biosynthetic protein fliR
JCM16456_RS04080	COG2840	Smr protein MutS2
JCM16456_RS04085	COG2890	protein-(glutamine-N5) methyltransferase activity
JCM16456_RS04090	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JCM16456_RS04095	COG3101	peptidyl-lysine hydroxylation
JCM16456_RS04110	COG2358	TRAP transporter, solute receptor (TAXI family
JCM16456_RS04120	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
JCM16456_RS04120	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JCM16456_RS04125	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JCM16456_RS04130	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JCM16456_RS04135	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JCM16456_RS04140	COG0735	belongs to the Fur family
JCM16456_RS04145	COG0583	DNA-binding transcription factor activity
JCM16456_RS04155	COG1346	cytolysis
JCM16456_RS04165	COG0596	Alpha beta hydrolase
JCM16456_RS04170	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
JCM16456_RS04175	COG0033	Phosphoglucomutase
JCM16456_RS04185	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JCM16456_RS04200	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
JCM16456_RS04205	COG1053	succinate dehydrogenase
JCM16456_RS04215	COG0567	Dehydrogenase, E1 component
JCM16456_RS04220	COG0508	dehydrogenase complex catalyzes the overall conversion of
JCM16456_RS04230	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JCM16456_RS04235	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JCM16456_RS04240	COG1121	(ABC) transporter
JCM16456_RS04245	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
JCM16456_RS04250	COG1918	ferrous iron import across plasma membrane
JCM16456_RS04275	COG3102	Protein conserved in bacteria
JCM16456_RS04285	COG2062	phosphohistidine phosphatase, SixA
JCM16456_RS04315	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
JCM16456_RS04320	COG0643	Histidine kinase
JCM16456_RS04320	COG2198	Histidine kinase
JCM16456_RS04320	COG0784	Response regulator, receiver
JCM16456_RS04325	COG2201	protein-glutamate methylesterase activity
JCM16456_RS04330	COG1192	Involved in chromosome partitioning
JCM16456_RS04340	COG0835	chemotaxis
JCM16456_RS04350	COG4133	protoheme IX ABC transporter activity
JCM16456_RS04355	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JCM16456_RS04360	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JCM16456_RS04370	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
JCM16456_RS04375	COG1138	Cytochrome C-type biogenesis protein
JCM16456_RS04380	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JCM16456_RS04390	COG3088	subunit of a heme lyase
JCM16456_RS04390	COG4235	cytochrome complex assembly
JCM16456_RS04410	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JCM16456_RS04415	COG3477	response to acidic pH
JCM16456_RS04420	COG0454	-acetyltransferase
JCM16456_RS04430	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
JCM16456_RS04435	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JCM16456_RS04450	COG0583	DNA-binding transcription factor activity
JCM16456_RS04455	COG2814	Major facilitator Superfamily
JCM16456_RS04465	COG2190	(PTS) system
JCM16456_RS04465	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCM16456_RS04465	COG1263	PTS System
JCM16456_RS04470	COG2723	6-phospho-beta-galactosidase activity
JCM16456_RS04475	COG3711	transcriptional antiterminator
JCM16456_RS04485	COG2197	response regulator
JCM16456_RS04490	COG4585	Histidine kinase
JCM16456_RS04495	COG3700	Belongs to the class B bacterial acid phosphatase family
JCM16456_RS04525	COG3083	sulfuric ester hydrolase activity
JCM16456_RS04530	COG3082	Protein of unknown function (DUF1414)
JCM16456_RS04535	COG3081	Nucleoid-associated protein
JCM16456_RS04540	COG1757	Na H antiporter
JCM16456_RS04545	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JCM16456_RS04550	COG2095	MarC family integral membrane protein
JCM16456_RS04555	COG1012	belongs to the aldehyde dehydrogenase family
JCM16456_RS04555	COG1454	alcohol dehydrogenase
JCM16456_RS04560	COG0659	secondary active sulfate transmembrane transporter activity
JCM16456_RS04565	COG1530	ribonuclease E activity
JCM16456_RS04570	COG1530	ribonuclease E activity
JCM16456_RS04575	COG0564	pseudouridine synthase activity
JCM16456_RS04580	COG0424	maF-like protein
JCM16456_RS04585	COG1399	metal-binding, possibly nucleic acid-binding protein
JCM16456_RS04590	COG0333	Belongs to the bacterial ribosomal protein bL32 family
JCM16456_RS04600	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JCM16456_RS04605	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JCM16456_RS04625	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JCM16456_RS04630	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JCM16456_RS04635	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JCM16456_RS04640	COG0470	DNA polymerase III
JCM16456_RS04645	COG0084	hydrolase, TatD family'
JCM16456_RS04650	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCM16456_RS04650	COG2190	(PTS) system
JCM16456_RS04650	COG1263	PTS System
JCM16456_RS04665	COG0733	neurotransmitter:sodium symporter activity
JCM16456_RS04670	COG4667	esterase of the alpha-beta hydrolase superfamily
JCM16456_RS04675	COG0469	pyruvate kinase activity
JCM16456_RS04680	COG1940	carbohydrate kinase activity
JCM16456_RS04685	COG0784	Response regulator, receiver
JCM16456_RS04685	COG0835	chemotaxis
JCM16456_RS04690	COG0587	DNA-directed DNA polymerase activity
JCM16456_RS04710	COG1028	Short-chain dehydrogenase reductase Sdr
JCM16456_RS04715	COG0616	signal peptide processing
JCM16456_RS04725	COG2382	esterase
JCM16456_RS04740	COG0232	Belongs to the dGTPase family. Type 2 subfamily
JCM16456_RS04745	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
JCM16456_RS04750	COG0436	Aminotransferase
JCM16456_RS04755	COG1169	isochorismate synthase
JCM16456_RS04760	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
JCM16456_RS04765	COG0596	Alpha beta hydrolase
JCM16456_RS04770	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
JCM16456_RS04785	COG2855	membrane
JCM16456_RS04815	COG1522	sequence-specific DNA binding
JCM16456_RS04825	COG0840	transmembrane signaling receptor activity
JCM16456_RS04830	COG1946	Acyl-CoA thioesterase
JCM16456_RS04845	COG5001	Diguanylate cyclase
JCM16456_RS04935	COG3547	Transposase (IS116 IS110 IS902 family)
JCM16456_RS04955	COG0513	Belongs to the DEAD box helicase family
JCM16456_RS05010	COG2203	Gaf domain
JCM16456_RS05010	COG5001	Diguanylate cyclase
JCM16456_RS05010	COG3706	GGDEF domain
JCM16456_RS05010	COG4251	negative regulation of phosphorylation
JCM16456_RS05015	COG0583	DNA-binding transcription factor activity
JCM16456_RS05025	COG0656	L-ascorbic acid biosynthetic process
JCM16456_RS05030	COG0667	Aldo Keto reductase
JCM16456_RS05040	COG0642	Histidine kinase
JCM16456_RS05045	COG0745	RESPONSE REGULATOR receiver
JCM16456_RS05050	COG2194	sulfuric ester hydrolase activity
JCM16456_RS05070	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JCM16456_RS05075	COG2200	EAL domain
JCM16456_RS05075	COG2771	luxR family
JCM16456_RS05080	COG0784	Response regulator, receiver
JCM16456_RS05080	COG5002	protein histidine kinase activity
JCM16456_RS05080	COG2205	protein histidine kinase activity
JCM16456_RS05085	COG5001	Diguanylate cyclase
JCM16456_RS05085	COG4251	negative regulation of phosphorylation
JCM16456_RS05085	COG3706	GGDEF domain
JCM16456_RS05085	COG2203	Gaf domain
JCM16456_RS05105	COG1902	pentaerythritol trinitrate reductase activity
JCM16456_RS05135	COG0583	DNA-binding transcription factor activity
JCM16456_RS05145	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JCM16456_RS05165	COG3527	Alpha-acetolactate decarboxylase
JCM16456_RS05240	COG0583	DNA-binding transcription factor activity
JCM16456_RS05245	COG1028	Short-chain dehydrogenase reductase Sdr
JCM16456_RS05260	COG0561	phosphatase activity
JCM16456_RS05265	COG1609	Transcriptional regulator
JCM16456_RS05280	COG1473	amidohydrolase
JCM16456_RS05290	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JCM16456_RS05295	COG3041	Addiction module toxin RelE StbE family
JCM16456_RS05305	COG1280	lysine exporter protein (LysE YggA)
JCM16456_RS05310	COG0672	)-iron permease
JCM16456_RS05325	COG0577	efflux transmembrane transporter activity
JCM16456_RS05335	COG1136	(ABC) transporter
JCM16456_RS05335	COG0577	efflux transmembrane transporter activity
JCM16456_RS05350	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JCM16456_RS05360	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JCM16456_RS05365	COG0163	prenyltransferase activity
JCM16456_RS05370	COG1846	Transcriptional regulator
JCM16456_RS05400	COG3604	Transcriptional regulator
JCM16456_RS05405	COG1472	Belongs to the glycosyl hydrolase 3 family
JCM16456_RS05410	COG1472	Belongs to the glycosyl hydrolase 3 family
JCM16456_RS05420	COG1914	H( )-stimulated, divalent metal cation uptake system
JCM16456_RS05425	COG1321	iron dependent repressor
JCM16456_RS05430	COG2211	Major facilitator Superfamily
JCM16456_RS05435	COG3250	beta-galactosidase activity
JCM16456_RS05445	COG2866	Carboxypeptidase
JCM16456_RS05450	COG3706	GGDEF domain
JCM16456_RS05455	COG0656	L-ascorbic acid biosynthetic process
JCM16456_RS05460	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JCM16456_RS05475	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JCM16456_RS05490	COG0811	peptide transport
JCM16456_RS05510	COG3623	hexulose-6-phosphate isomerase
JCM16456_RS05515	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
JCM16456_RS05520	COG0561	phosphatase activity
JCM16456_RS05555	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JCM16456_RS05560	COG0515	serine threonine protein kinase
JCM16456_RS05565	COG1522	sequence-specific DNA binding
JCM16456_RS05575	COG1448	Aminotransferase
JCM16456_RS05595	COG0747	negative chemotaxis
JCM16456_RS05605	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JCM16456_RS05610	COG0444	Belongs to the ABC transporter superfamily
JCM16456_RS05615	COG4608	Belongs to the ABC transporter superfamily
JCM16456_RS05635	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JCM16456_RS05640	COG4139	cobalamin transport
JCM16456_RS05645	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
JCM16456_RS05655	COG0386	Belongs to the glutathione peroxidase family
JCM16456_RS05665	COG1609	Transcriptional regulator
JCM16456_RS05670	COG2723	6-phospho-beta-galactosidase activity
JCM16456_RS05675	COG1741	Belongs to the pirin family
JCM16456_RS05680	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
JCM16456_RS05695	COG1538	Outer membrane efflux protein
JCM16456_RS05700	COG1566	PFAM secretion protein HlyD family protein
JCM16456_RS05705	COG2814	Major facilitator Superfamily
JCM16456_RS05725	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JCM16456_RS05735	COG3008	intermembrane lipid transfer
JCM16456_RS05735	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JCM16456_RS05740	COG2995	paraquat-inducible protein a
JCM16456_RS05750	COG0745	RESPONSE REGULATOR receiver
JCM16456_RS05755	COG2205	protein histidine kinase activity
JCM16456_RS05760	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCM16456_RS05760	COG1263	PTS System
JCM16456_RS05770	COG1621	beta-fructofuranosidase activity
JCM16456_RS05775	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JCM16456_RS05790	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JCM16456_RS05800	COG4166	transmembrane transport
JCM16456_RS05805	COG0601	transmembrane transport
JCM16456_RS05810	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JCM16456_RS05825	COG0435	Glutathione S-transferase
JCM16456_RS05830	COG0857	belongs to the CobB CobQ family
JCM16456_RS05830	COG0280	phosphate acetyltransferase
JCM16456_RS05835	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JCM16456_RS05840	COG3092	negative regulation of chromosome organization
JCM16456_RS05850	COG4120	Belongs to the binding-protein-dependent transport system permease family
JCM16456_RS05855	COG1122	ATPase activity
JCM16456_RS05865	COG0653	protein targeting
JCM16456_RS05870	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
JCM16456_RS05875	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JCM16456_RS05880	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JCM16456_RS05885	COG0243	molybdopterin cofactor binding
JCM16456_RS05900	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
JCM16456_RS05905	COG0156	8-amino-7-oxononanoate synthase activity
JCM16456_RS05910	COG2226	methyltransferase
JCM16456_RS05915	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
JCM16456_RS05940	COG1028	Short-chain dehydrogenase reductase Sdr
JCM16456_RS05955	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JCM16456_RS05975	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JCM16456_RS05980	COG2915	High frequency lysogenization protein hflD homolog
JCM16456_RS05985	COG0482	sulfurtransferase activity
JCM16456_RS05990	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JCM16456_RS05995	COG2916	Histone family protein nucleoid-structuring protein H-NS
JCM16456_RS06000	COG1757	Na H antiporter
JCM16456_RS06005	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
JCM16456_RS06010	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JCM16456_RS06015	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JCM16456_RS06020	COG0131	Imidazoleglycerol-phosphate dehydratase
JCM16456_RS06020	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
JCM16456_RS06025	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JCM16456_RS06030	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
JCM16456_RS06035	COG0107	imidazoleglycerol-phosphate synthase activity
JCM16456_RS06040	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JCM16456_RS06040	COG0140	phosphoribosyl-ATP diphosphatase activity
JCM16456_RS06055	COG1278	Cold shock
JCM16456_RS06060	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
JCM16456_RS06065	COG0542	response to heat
JCM16456_RS06070	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JCM16456_RS06080	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
JCM16456_RS06085	COG3134	Outer membrane lipoprotein
JCM16456_RS06105	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JCM16456_RS06110	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JCM16456_RS06115	COG0297	glycogen (starch) synthase activity
JCM16456_RS06125	COG3070	regulator of competence-specific genes
JCM16456_RS06130	COG1609	Transcriptional regulator
JCM16456_RS06135	COG0745	RESPONSE REGULATOR receiver
JCM16456_RS06140	COG1434	Gram-negative-bacterium-type cell wall biogenesis
JCM16456_RS06145	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JCM16456_RS06155	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
JCM16456_RS06165	COG0189	ligase activity
JCM16456_RS06175	COG0189	ligase activity
JCM16456_RS06175	COG4067	protein conserved in archaea
JCM16456_RS06180	COG0500	methyltransferase
JCM16456_RS06185	COG4106	trans-aconitate 2-methyltransferase activity
JCM16456_RS06190	COG1801	Protein of unknown function DUF72
JCM16456_RS06195	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
JCM16456_RS06200	COG1435	thymidine kinase activity
JCM16456_RS06205	COG1434	Gram-negative-bacterium-type cell wall biogenesis
JCM16456_RS06225	COG2116	formate transmembrane transporter activity
JCM16456_RS06230	COG0390	transport system, permease component
JCM16456_RS06240	COG4172	Belongs to the ABC transporter superfamily
JCM16456_RS06250	COG4171	peptide transport system, permease
JCM16456_RS06255	COG4168	peptide transport system, permease
JCM16456_RS06260	COG4166	transmembrane transport
JCM16456_RS06265	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JCM16456_RS06270	COG1842	Phage shock protein A
JCM16456_RS06285	COG2818	Glycosylase
JCM16456_RS06290	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JCM16456_RS06300	COG3501	Rhs element vgr protein
JCM16456_RS06330	COG3209	COG3209 Rhs family protein
JCM16456_RS06355	COG0626	cystathionine gamma-synthase activity
JCM16456_RS06365	COG0733	neurotransmitter:sodium symporter activity
JCM16456_RS06370	COG0564	pseudouridine synthase activity
JCM16456_RS06375	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JCM16456_RS06380	COG4134	Bacterial extracellular solute-binding protein
JCM16456_RS06390	COG3313	Fe-S protein
JCM16456_RS06400	COG0814	amino acid
JCM16456_RS06405	COG0513	Belongs to the DEAD box helicase family
JCM16456_RS06415	COG1070	Carbohydrate kinase
JCM16456_RS06420	COG4806	L-rhamnose isomerase
JCM16456_RS06430	COG3254	rhamnose metabolic process
JCM16456_RS06435	COG0235	Class ii aldolase
JCM16456_RS06460	COG1278	Cold shock
JCM16456_RS06480	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JCM16456_RS06485	COG0601	transmembrane transport
JCM16456_RS06490	COG0747	negative chemotaxis
JCM16456_RS06500	COG1917	Cupin 2, conserved barrel domain protein
JCM16456_RS06500	COG2207	Transcriptional regulator
JCM16456_RS06505	COG0697	spore germination
JCM16456_RS06520	COG1971	Probably functions as a manganese efflux pump
JCM16456_RS06565	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
JCM16456_RS06610	COG0642	Histidine kinase
JCM16456_RS06615	COG0745	RESPONSE REGULATOR receiver
JCM16456_RS06625	COG1061	Type III restriction enzyme res subunit
JCM16456_RS06630	COG1187	pseudouridine synthase activity
JCM16456_RS06635	COG2814	Major facilitator Superfamily
JCM16456_RS06645	COG0702	epimerase
JCM16456_RS06650	COG4181	ATPase activity
JCM16456_RS06665	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JCM16456_RS06705	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JCM16456_RS06715	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JCM16456_RS06735	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JCM16456_RS06745	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JCM16456_RS06760	COG1846	Transcriptional regulator
JCM16456_RS06765	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JCM16456_RS06775	COG0840	transmembrane signaling receptor activity
JCM16456_RS06780	COG2176	DNA-directed DNA polymerase activity
JCM16456_RS06790	COG1448	Aminotransferase
JCM16456_RS06795	COG0017	Asparaginyl-tRNA synthetase
JCM16456_RS06810	COG2249	NAD(P)H dehydrogenase (quinone) activity
JCM16456_RS06820	COG0583	DNA-binding transcription factor activity
JCM16456_RS06845	COG0110	maltose O-acetyltransferase activity
JCM16456_RS06850	COG2207	Transcriptional regulator
JCM16456_RS06855	COG2814	Major facilitator Superfamily
JCM16456_RS06860	COG0583	DNA-binding transcription factor activity
JCM16456_RS06870	COG2267	carboxylic ester hydrolase activity
JCM16456_RS06900	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JCM16456_RS06910	COG3138	arginine N-succinyltransferase
JCM16456_RS06915	COG1012	belongs to the aldehyde dehydrogenase family
JCM16456_RS06920	COG3724	N-succinylarginine dihydrolase activity
JCM16456_RS06930	COG2188	Transcriptional regulator
JCM16456_RS06935	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JCM16456_RS06940	COG0471	metal ion transport
JCM16456_RS06945	COG0583	DNA-binding transcription factor activity
JCM16456_RS06950	COG2814	Major facilitator Superfamily
JCM16456_RS06955	COG2991	Protein conserved in bacteria
JCM16456_RS06965	COG0840	transmembrane signaling receptor activity
JCM16456_RS06985	COG0436	Aminotransferase
JCM16456_RS07030	COG0477	Major facilitator Superfamily
JCM16456_RS07030	COG2814	Major facilitator Superfamily
JCM16456_RS07045	COG0583	DNA-binding transcription factor activity
JCM16456_RS07060	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JCM16456_RS07070	COG2226	methyltransferase
JCM16456_RS07075	COG1408	metallophosphoesterase
JCM16456_RS07100	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JCM16456_RS07120	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
JCM16456_RS07125	COG2944	sequence-specific DNA binding
JCM16456_RS07150	COG2814	Major facilitator Superfamily
JCM16456_RS07155	COG1609	Transcriptional regulator
JCM16456_RS07165	COG2182	Extracellular solute-binding protein
JCM16456_RS07170	COG1175	transmembrane transport
JCM16456_RS07175	COG3833	ABC-type maltose transport systems, permease component
JCM16456_RS07180	COG3867	Arabinogalactan endo-beta-1,4-galactanase
JCM16456_RS07185	COG1874	Beta-galactosidase
JCM16456_RS07190	COG4580	involved in the transport of maltose and maltodextrins
JCM16456_RS07200	COG2207	Transcriptional regulator
JCM16456_RS07200	COG1609	Transcriptional regulator
JCM16456_RS07225	COG1122	ATPase activity
JCM16456_RS07230	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JCM16456_RS07235	COG1268	BioY protein
JCM16456_RS07245	COG0513	Belongs to the DEAD box helicase family
JCM16456_RS07250	COG0720	synthase
JCM16456_RS07255	COG1538	Outer membrane efflux protein
JCM16456_RS07260	COG1136	(ABC) transporter
JCM16456_RS07260	COG0577	efflux transmembrane transporter activity
JCM16456_RS07265	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JCM16456_RS07270	COG1760	l-serine dehydratase
JCM16456_RS07275	COG0814	amino acid
JCM16456_RS07280	COG0494	nUDIX hydrolase
JCM16456_RS07285	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JCM16456_RS07300	COG3106	COG3106 Predicted ATPase
JCM16456_RS07315	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JCM16456_RS07330	COG0583	DNA-binding transcription factor activity
JCM16456_RS07355	COG3181	Tripartite tricarboxylate transporter family receptor
JCM16456_RS07365	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
JCM16456_RS07370	COG0372	Belongs to the citrate synthase family
JCM16456_RS07375	COG2079	MmgE PrpD family protein
JCM16456_RS07395	COG2200	EAL domain
JCM16456_RS07405	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
JCM16456_RS07415	COG0625	glutathione transferase activity
JCM16456_RS07435	COG3479	Phenolic acid decarboxylase
JCM16456_RS07440	COG0584	glycerophosphoryl diester phosphodiesterase
JCM16456_RS07445	COG1349	DNA-binding transcription factor activity
JCM16456_RS07450	COG3842	ATPase activity
JCM16456_RS07455	COG0395	ABC-type sugar transport system, permease component
JCM16456_RS07460	COG1175	transmembrane transport
JCM16456_RS07470	COG0039	L-malate dehydrogenase activity
JCM16456_RS07475	COG3040	lipid binding
JCM16456_RS07485	COG0811	peptide transport
JCM16456_RS07490	COG0811	peptide transport
JCM16456_RS07495	COG0848	biopolymer transport protein
JCM16456_RS07535	COG0307	riboflavin synthase, alpha
JCM16456_RS07545	COG3001	Fructosamine kinase
JCM16456_RS07555	COG0791	NLP P60 protein
JCM16456_RS07565	COG1940	carbohydrate kinase activity
JCM16456_RS07575	COG0303	'Molybdopterin
JCM16456_RS07580	COG0746	molybdenum cofactor guanylyltransferase activity
JCM16456_RS07590	COG0004	ammonium transporteR
JCM16456_RS07595	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JCM16456_RS07600	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JCM16456_RS07610	COG1177	transmembrane transport
JCM16456_RS07620	COG3842	ATPase activity
JCM16456_RS07640	COG0589	response to stress
JCM16456_RS07645	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JCM16456_RS07660	COG0784	Response regulator, receiver
JCM16456_RS07660	COG2205	protein histidine kinase activity
JCM16456_RS07680	COG3120	sequence-specific DNA binding
JCM16456_RS07685	COG1067	ATP-dependent peptidase activity
JCM16456_RS07690	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JCM16456_RS07700	COG0488	(ABC) transporter
JCM16456_RS07710	COG0116	Belongs to the methyltransferase superfamily
JCM16456_RS07710	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JCM16456_RS07720	COG0167	dihydroorotate dehydrogenase activity
JCM16456_RS07725	COG2902	Dehydrogenase
JCM16456_RS07730	COG0308	aminopeptidase N
JCM16456_RS07745	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
JCM16456_RS07750	COG1956	GAF domain-containing protein
JCM16456_RS07755	COG1132	(ABC) transporter
JCM16456_RS07760	COG2995	paraquat-inducible protein a
JCM16456_RS07765	COG3008	intermembrane lipid transfer
JCM16456_RS07775	COG2996	Protein conserved in bacteria
JCM16456_RS07785	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JCM16456_RS07785	COG0574	Belongs to the PEP-utilizing enzyme family
JCM16456_RS07790	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JCM16456_RS07805	COG1115	amino acid carrier protein
JCM16456_RS07815	COG1280	lysine exporter protein (LysE YggA)
JCM16456_RS07855	COG5433	transposase activity
JCM16456_RS07880	COG3501	Rhs element vgr protein
JCM16456_RS07890	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
JCM16456_RS07900	COG1643	Atp-dependent helicase
JCM16456_RS07905	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
JCM16456_RS07940	COG0443	Heat shock 70 kDa protein
JCM16456_RS07945	COG3706	GGDEF domain
JCM16456_RS07970	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JCM16456_RS07975	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JCM16456_RS07980	COG4615	Cyclic peptide transporter
JCM16456_RS08000	COG2977	Belongs to the P-Pant transferase superfamily
JCM16456_RS08005	COG2999	glutathione oxidoreductase activity
JCM16456_RS08015	COG0602	queuosine metabolic process
JCM16456_RS08020	COG0561	phosphatase activity
JCM16456_RS08025	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JCM16456_RS08025	COG1648	precorrin-2 dehydrogenase activity
JCM16456_RS08035	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JCM16456_RS08040	COG4597	amino acid ABC transporter
JCM16456_RS08045	COG0765	amino acid transport
JCM16456_RS08050	COG1126	abc transporter atp-binding protein
JCM16456_RS08055	COG0670	Belongs to the BI1 family
JCM16456_RS08060	COG2920	part of a sulfur-relay system
JCM16456_RS08065	COG1254	Belongs to the acylphosphatase family
JCM16456_RS08070	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JCM16456_RS08075	COG1028	Short-chain dehydrogenase reductase Sdr
JCM16456_RS08090	COG0835	chemotaxis
JCM16456_RS08095	COG2201	protein-glutamate methylesterase activity
JCM16456_RS08105	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
JCM16456_RS08115	COG2198	Histidine kinase
JCM16456_RS08115	COG0643	Histidine kinase
JCM16456_RS08125	COG0745	RESPONSE REGULATOR receiver
JCM16456_RS08135	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
JCM16456_RS08140	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
JCM16456_RS08165	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JCM16456_RS08205	COG5433	transposase activity
JCM16456_RS08235	COG2235	arginine
JCM16456_RS08275	COG0431	NADPH-dependent FMN reductase
JCM16456_RS08275	COG3976	FMN-binding domain protein
JCM16456_RS08275	COG1053	succinate dehydrogenase
JCM16456_RS08280	COG2814	Major facilitator Superfamily
JCM16456_RS08305	COG0840	transmembrane signaling receptor activity
JCM16456_RS08315	COG1064	alcohol dehydrogenase
JCM16456_RS08320	COG1979	alcohol dehydrogenase
JCM16456_RS08335	COG4221	oxidoreductase activity
JCM16456_RS08340	COG0697	spore germination
JCM16456_RS08360	COG1028	Short-chain dehydrogenase reductase Sdr
JCM16456_RS08370	COG1733	regulation of RNA biosynthetic process
JCM16456_RS08385	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JCM16456_RS08390	COG1929	Belongs to the glycerate kinase type-1 family
JCM16456_RS08395	COG2610	gluconate transmembrane transporter activity
JCM16456_RS08400	COG3835	regulator
JCM16456_RS08410	COG0668	transmembrane transport
JCM16456_RS08425	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
JCM16456_RS08445	COG2723	6-phospho-beta-galactosidase activity
JCM16456_RS08455	COG3323	Protein of unknown function (DUF1653)
JCM16456_RS08455	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JCM16456_RS08470	COG2723	6-phospho-beta-galactosidase activity
JCM16456_RS08475	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCM16456_RS08475	COG2190	(PTS) system
JCM16456_RS08475	COG1263	PTS System
JCM16456_RS08480	COG3711	transcriptional antiterminator
JCM16456_RS08515	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
JCM16456_RS08520	COG5001	Diguanylate cyclase
JCM16456_RS08520	COG3300	MHYT domain
JCM16456_RS08525	COG2105	PFAM AIG2 family protein
JCM16456_RS08530	COG3136	membrane protein required for alginate biosynthesis
JCM16456_RS08540	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JCM16456_RS08545	COG0745	RESPONSE REGULATOR receiver
JCM16456_RS08550	COG2205	protein histidine kinase activity
JCM16456_RS08555	COG0110	maltose O-acetyltransferase activity
JCM16456_RS08560	COG2176	DNA-directed DNA polymerase activity
JCM16456_RS08580	COG0523	cobalamin synthesis protein
JCM16456_RS08595	COG3706	GGDEF domain
JCM16456_RS08605	COG0835	chemotaxis
JCM16456_RS08605	COG0784	Response regulator, receiver
JCM16456_RS08620	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JCM16456_RS08660	COG1451	nucleotide metabolic process
JCM16456_RS08670	COG0583	DNA-binding transcription factor activity
JCM16456_RS08675	COG2814	Major facilitator Superfamily
JCM16456_RS08705	COG4139	cobalamin transport
JCM16456_RS08710	COG2988	succinylglutamate desuccinylase activity
JCM16456_RS08720	COG0702	epimerase
JCM16456_RS08750	COG0778	Nitroreductase
JCM16456_RS08755	COG0443	Heat shock 70 kDa protein
JCM16456_RS08765	COG1473	amidohydrolase
JCM16456_RS08770	COG3416	Protein conserved in bacteria
JCM16456_RS08775	COG3152	Membrane
JCM16456_RS08790	COG0697	spore germination
JCM16456_RS08795	COG0583	DNA-binding transcription factor activity
JCM16456_RS08805	COG1012	belongs to the aldehyde dehydrogenase family
JCM16456_RS08810	COG1473	amidohydrolase
JCM16456_RS08825	COG2814	Major facilitator Superfamily
JCM16456_RS08840	COG4677	pectinesterase activity
JCM16456_RS08845	COG0513	Belongs to the DEAD box helicase family
JCM16456_RS08855	COG4628	conserved protein (DUF2132)
JCM16456_RS08880	COG0745	RESPONSE REGULATOR receiver
JCM16456_RS08890	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JCM16456_RS08895	COG3409	Peptidoglycan-binding domain 1 protein
JCM16456_RS08895	COG3267	Type II secretory pathway component ExeA
JCM16456_RS08905	COG0489	protein tyrosine kinase activity
JCM16456_RS08920	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JCM16456_RS08925	COG0726	polysaccharide deacetylase
JCM16456_RS08945	COG0367	asparagine synthase
JCM16456_RS08950	COG0438	transferase activity, transferring glycosyl groups
JCM16456_RS08955	COG0438	transferase activity, transferring glycosyl groups
JCM16456_RS08970	COG0583	DNA-binding transcription factor activity
JCM16456_RS08985	COG2433	Pfam Transposase IS66
JCM16456_RS08995	COG0583	DNA-binding transcription factor activity
JCM16456_RS09000	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JCM16456_RS09010	COG1335	isochorismatase
JCM16456_RS09050	COG0438	transferase activity, transferring glycosyl groups
JCM16456_RS09065	COG2327	Polysaccharide pyruvyl transferase
JCM16456_RS09070	COG2244	polysaccharide biosynthetic process
JCM16456_RS09075	COG1442	glycosyl transferase family 8
JCM16456_RS09090	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JCM16456_RS09110	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JCM16456_RS09140	COG2204	response regulator
JCM16456_RS09150	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
JCM16456_RS09165	COG2925	Exonuclease
JCM16456_RS09170	COG1380	Effector of murein hydrolase LrgA
JCM16456_RS09175	COG1346	cytolysis
JCM16456_RS09200	COG0776	regulation of translation
JCM16456_RS09205	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JCM16456_RS09205	COG0072	phenylalanine-tRNA ligase activity
JCM16456_RS09210	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JCM16456_RS09250	COG0322	excinuclease ABC activity
JCM16456_RS09255	COG2197	response regulator
JCM16456_RS09260	COG0417	DNA replication proofreading
JCM16456_RS09270	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JCM16456_RS09275	COG3099	Belongs to the UPF0263 family
JCM16456_RS09290	COG2020	methyltransferase activity
JCM16456_RS09295	COG0277	FAD linked oxidase domain protein
JCM16456_RS09295	COG0247	lactate metabolic process
JCM16456_RS09325	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
JCM16456_RS09345	COG3681	Belongs to the UPF0597 family
JCM16456_RS09355	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JCM16456_RS09360	COG1085	galactose-1-phosphate uridylyltransferase
JCM16456_RS09365	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JCM16456_RS09370	COG0281	malic enzyme
JCM16456_RS09380	COG2949	membrane
JCM16456_RS09395	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JCM16456_RS09400	COG0640	Transcriptional regulator
JCM16456_RS09435	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JCM16456_RS09465	COG0494	nUDIX hydrolase
JCM16456_RS09470	COG0456	acetyltransferase
JCM16456_RS09485	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JCM16456_RS09515	COG0384	phenazine biosynthesis protein PhzF
JCM16456_RS09520	COG1418	mRNA catabolic process
JCM16456_RS09535	COG1280	lysine exporter protein (LysE YggA)
JCM16456_RS09610	COG4974	Belongs to the 'phage' integrase family
JCM16456_RS09630	COG0492	ferredoxin-NADP+ reductase activity
JCM16456_RS09635	COG4988	ABC transporter
JCM16456_RS09640	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
JCM16456_RS09645	COG1187	pseudouridine synthase activity
JCM16456_RS09650	COG0009	L-threonylcarbamoyladenylate synthase
JCM16456_RS09655	COG0613	PHP domain protein
JCM16456_RS09660	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JCM16456_RS09665	COG0512	Glutamine amidotransferase of anthranilate synthase
JCM16456_RS09670	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JCM16456_RS09675	COG0135	phosphoribosylanthranilate isomerase activity
JCM16456_RS09675	COG0134	indole-3-glycerol-phosphate synthase activity
JCM16456_RS09680	COG0133	tryptophan synthase activity
JCM16456_RS09690	COG1301	dicarboxylic acid transport
JCM16456_RS09705	COG2350	Protein conserved in bacteria
JCM16456_RS09715	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JCM16456_RS09720	COG0583	DNA-binding transcription factor activity
JCM16456_RS09740	COG0840	transmembrane signaling receptor activity
JCM16456_RS09750	COG1032	radical SAM domain protein
JCM16456_RS09755	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
JCM16456_RS09770	COG1126	abc transporter atp-binding protein
JCM16456_RS09775	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JCM16456_RS09780	COG4215	(ABC) transporter
JCM16456_RS09785	COG4160	amino acid transport
JCM16456_RS09800	COG3070	regulator of competence-specific genes
JCM16456_RS09810	COG0076	glutamate decarboxylase activity
JCM16456_RS09815	COG1737	Transcriptional regulator
JCM16456_RS09820	COG1454	alcohol dehydrogenase
JCM16456_RS09825	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JCM16456_RS09830	COG2985	domain, Protein
JCM16456_RS09830	COG3273	potassium ion transport
JCM16456_RS09840	COG1960	acyl-CoA dehydrogenase activity
JCM16456_RS09850	COG1454	alcohol dehydrogenase
JCM16456_RS09855	COG0840	transmembrane signaling receptor activity
JCM16456_RS09865	COG3300	MHYT domain
JCM16456_RS09865	COG5001	Diguanylate cyclase
JCM16456_RS09875	COG0477	Major facilitator Superfamily
JCM16456_RS09880	COG0840	transmembrane signaling receptor activity
JCM16456_RS09885	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JCM16456_RS09890	COG1742	UPF0060 membrane protein
JCM16456_RS09910	COG3547	Transposase (IS116 IS110 IS902 family)
JCM16456_RS09930	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JCM16456_RS09935	COG0270	DNA (cytosine-5-)-methyltransferase activity
JCM16456_RS09940	COG2433	Pfam Transposase IS66
JCM16456_RS09955	COG2610	gluconate transmembrane transporter activity
JCM16456_RS09960	COG0129	dihydroxy-acid dehydratase activity
JCM16456_RS09965	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JCM16456_RS09970	COG1414	Transcriptional regulator
JCM16456_RS09990	COG2515	1-aminocyclopropane-1-carboxylate deaminase
JCM16456_RS09995	COG1522	sequence-specific DNA binding
JCM16456_RS10000	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
JCM16456_RS10005	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
JCM16456_RS10010	COG2885	chlorophyll binding
JCM16456_RS10015	COG0823	Involved in the tonB-independent uptake of proteins
JCM16456_RS10030	COG0811	peptide transport
JCM16456_RS10035	COG0824	Thioesterase
JCM16456_RS10045	COG4890	Cyd operon protein YbgT
JCM16456_RS10050	COG1294	oxidase, subunit
JCM16456_RS10055	COG1271	oxidase subunit
JCM16456_RS10060	COG2255	four-way junction helicase activity
JCM16456_RS10065	COG0632	four-way junction helicase activity
JCM16456_RS10070	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
JCM16456_RS10075	COG0215	cysteine-tRNA ligase activity
JCM16456_RS10080	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JCM16456_RS10090	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
JCM16456_RS10095	COG3012	SEC-C Motif Domain Protein
JCM16456_RS10100	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
JCM16456_RS10105	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
JCM16456_RS10110	COG1199	ATP-dependent helicase activity
JCM16456_RS10115	COG3923	Primosomal replication protein n
JCM16456_RS10125	COG0708	Exodeoxyribonuclease III
JCM16456_RS10130	COG4160	amino acid transport
JCM16456_RS10150	COG1882	Formate acetyltransferase
JCM16456_RS10160	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JCM16456_RS10175	COG2766	serine protein kinase
JCM16456_RS10185	COG2719	SpoVR family
JCM16456_RS10190	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
JCM16456_RS10200	COG1663	tetraacyldisaccharide 4'-kinase activity
JCM16456_RS10205	COG1132	(ABC) transporter
JCM16456_RS10210	COG0658	competence protein
JCM16456_RS10210	COG2333	competence protein COMEC
JCM16456_RS10220	COG4591	ABC-type transport system involved in lipoprotein release permease component
JCM16456_RS10225	COG1136	(ABC) transporter
JCM16456_RS10230	COG4591	ABC-type transport system involved in lipoprotein release permease component
JCM16456_RS10240	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JCM16456_RS10255	COG1252	NADH dehydrogenase
JCM16456_RS10285	COG0537	adenosine 5'-monophosphoramidase activity
JCM16456_RS10295	COG2186	Transcriptional regulator
JCM16456_RS10300	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JCM16456_RS10305	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
JCM16456_RS10310	COG1674	ftsk spoiiie
JCM16456_RS10315	COG1522	sequence-specific DNA binding
JCM16456_RS10320	COG0686	Belongs to the AlaDH PNT family
JCM16456_RS10330	COG0583	DNA-binding transcription factor activity
JCM16456_RS10350	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
JCM16456_RS10355	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
JCM16456_RS10365	COG0539	negative regulation of cytoplasmic translation
JCM16456_RS10370	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
JCM16456_RS10380	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JCM16456_RS10385	COG0776	regulation of translation
JCM16456_RS10390	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JCM16456_RS10395	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JCM16456_RS10415	COG2204	response regulator
JCM16456_RS10420	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JCM16456_RS10425	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
JCM16456_RS10430	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JCM16456_RS10435	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
JCM16456_RS10440	COG1760	l-serine dehydratase
JCM16456_RS10445	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JCM16456_RS10445	COG3153	acetyltransferase
JCM16456_RS10455	COG5001	Diguanylate cyclase
JCM16456_RS10455	COG3300	MHYT domain
JCM16456_RS10465	COG1280	lysine exporter protein (LysE YggA)
JCM16456_RS10480	COG3940	Belongs to the glycosyl hydrolase 43 family
JCM16456_RS10485	COG2211	Major facilitator Superfamily
JCM16456_RS10490	COG2851	Citrate transporter
JCM16456_RS10500	COG2814	Major facilitator Superfamily
JCM16456_RS10510	COG1309	transcriptional regulator
JCM16456_RS10535	COG2951	lytic endotransglycosylase activity
JCM16456_RS10540	COG3100	YcgL domain-containing protein
JCM16456_RS10550	COG2894	cell division
JCM16456_RS10555	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
JCM16456_RS10570	COG0318	PFAM AMP-dependent synthetase and ligase
JCM16456_RS10575	COG1073	alpha beta
JCM16456_RS10575	COG2226	methyltransferase
JCM16456_RS10590	COG1214	PFAM Peptidase M22, glycoprotease
JCM16456_RS10595	COG1199	ATP-dependent helicase activity
JCM16456_RS10605	COG0788	formyltetrahydrofolate deformylase activity
JCM16456_RS10610	COG0616	signal peptide processing
JCM16456_RS10615	COG0252	asparaginase activity
JCM16456_RS10620	COG3139	Protein of unknown function (DUF1315)
JCM16456_RS10630	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JCM16456_RS10635	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JCM16456_RS10645	COG2226	methyltransferase
JCM16456_RS10655	COG5001	Diguanylate cyclase
JCM16456_RS10655	COG3300	MHYT domain
JCM16456_RS10660	COG0840	transmembrane signaling receptor activity
JCM16456_RS10685	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JCM16456_RS10700	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JCM16456_RS10705	COG2832	Protein of unknown function (DUF454)
JCM16456_RS10710	COG0745	RESPONSE REGULATOR receiver
JCM16456_RS10715	COG0583	DNA-binding transcription factor activity
JCM16456_RS10720	COG0778	Nitroreductase
JCM16456_RS10725	COG1250	3-hydroxyacyl-CoA dehydrogenase
JCM16456_RS10725	COG1024	Enoyl-CoA hydratase
JCM16456_RS10730	COG0183	Belongs to the thiolase family
JCM16456_RS10740	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JCM16456_RS10745	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
JCM16456_RS10750	COG2982	Protein involved in outer membrane biogenesis
JCM16456_RS10755	COG0572	uridine kinase
JCM16456_RS10760	COG0489	protein tyrosine kinase activity
JCM16456_RS10765	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JCM16456_RS10765	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JCM16456_RS10775	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
JCM16456_RS10790	COG0517	IMP dehydrogenase activity
JCM16456_RS10795	COG0314	molybdopterin synthase activity
JCM16456_RS10800	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
JCM16456_RS10810	COG0521	Mo-molybdopterin cofactor biosynthetic process
JCM16456_RS10815	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
JCM16456_RS10820	COG0391	Required for morphogenesis under gluconeogenic growth conditions
JCM16456_RS10825	COG2198	Histidine kinase
JCM16456_RS10830	COG2204	response regulator
JCM16456_RS10835	COG0556	nucleotide-excision repair
JCM16456_RS10845	COG0745	RESPONSE REGULATOR receiver
JCM16456_RS10850	COG5002	protein histidine kinase activity
JCM16456_RS10860	COG4657	Part of a membrane complex involved in electron transport
JCM16456_RS10865	COG2878	Part of a membrane complex involved in electron transport
JCM16456_RS10870	COG4656	Part of a membrane complex involved in electron transport
JCM16456_RS10875	COG4658	electron transport chain
JCM16456_RS10880	COG4659	FMN binding
JCM16456_RS10890	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JCM16456_RS10895	COG0346	lactoylglutathione lyase activity
JCM16456_RS10910	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JCM16456_RS10915	COG2056	Na+-H+ antiporter family
JCM16456_RS10920	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JCM16456_RS10925	COG1286	toxin biosynthetic process
JCM16456_RS10930	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
JCM16456_RS10935	COG0285	dihydrofolate synthase activity
JCM16456_RS10940	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
JCM16456_RS10945	COG0101	tRNA pseudouridine synthase activity
JCM16456_RS10960	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCM16456_RS10960	COG2190	(PTS) system
JCM16456_RS10960	COG1263	PTS System
JCM16456_RS10965	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JCM16456_RS10970	COG1846	Transcriptional regulator
JCM16456_RS10970	COG1940	carbohydrate kinase activity
JCM16456_RS10975	COG4651	solute:proton antiporter activity
JCM16456_RS10975	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JCM16456_RS10980	COG0367	asparagine synthase
JCM16456_RS10995	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
JCM16456_RS11000	COG0563	adenylate kinase activity
JCM16456_RS11005	COG0326	Molecular chaperone. Has ATPase activity
JCM16456_RS11010	COG3710	Transcriptional regulator
JCM16456_RS11030	COG0622	Phosphoesterase
JCM16456_RS11035	COG1090	epimerase
JCM16456_RS11040	COG0300	oxidoreductase activity
JCM16456_RS11045	COG3118	belongs to the thioredoxin family
JCM16456_RS11050	COG0789	Transcriptional regulator
JCM16456_RS11055	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JCM16456_RS11060	COG3115	cell septum assembly
JCM16456_RS11065	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
JCM16456_RS11075	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JCM16456_RS11085	COG2190	(PTS) system
JCM16456_RS11090	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JCM16456_RS11095	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JCM16456_RS11100	COG1702	phosphate starvation-inducible protein PhoH
JCM16456_RS11105	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JCM16456_RS11110	COG4535	Mg2 and Co2 transporter CorC
JCM16456_RS11115	COG0815	Transfers the fatty acyl group on membrane lipoproteins
JCM16456_RS11130	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
JCM16456_RS11135	COG1466	dna polymerase III delta subunit
JCM16456_RS11140	COG0799	negative regulation of ribosome biogenesis
JCM16456_RS11145	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JCM16456_RS11150	COG0768	penicillin binding
JCM16456_RS11155	COG0772	Belongs to the SEDS family
JCM16456_RS11160	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JCM16456_RS11165	COG1686	Belongs to the peptidase S11 family
JCM16456_RS11170	COG2921	Belongs to the UPF0250 family
JCM16456_RS11175	COG0321	lipoyl(octanoyl) transferase activity
JCM16456_RS11180	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
JCM16456_RS11190	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JCM16456_RS11220	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
JCM16456_RS11225	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JCM16456_RS11230	COG2011	ABC-type metal ion transport system permease component
JCM16456_RS11235	COG1464	Belongs to the NlpA lipoprotein family
JCM16456_RS11240	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
JCM16456_RS11250	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
JCM16456_RS11250	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
JCM16456_RS11265	COG1611	Belongs to the LOG family
JCM16456_RS11270	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JCM16456_RS11290	COG0583	DNA-binding transcription factor activity
JCM16456_RS11295	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JCM16456_RS11295	COG0301	tRNA thio-modification
JCM16456_RS11305	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JCM16456_RS11310	COG1722	exodeoxyribonuclease VII activity
JCM16456_RS11315	COG0142	geranyltranstransferase activity
JCM16456_RS11320	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JCM16456_RS11325	COG0564	pseudouridine synthase activity
JCM16456_RS11330	COG3098	single-species biofilm formation
JCM16456_RS11360	COG1671	Belongs to the UPF0178 family
JCM16456_RS11365	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JCM16456_RS11370	COG0254	rRNA binding
JCM16456_RS11375	COG1720	tRNA m6t6A37 methyltransferase activity
JCM16456_RS11380	COG0442	prolyl-tRNA aminoacylation
JCM16456_RS11410	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
JCM16456_RS11415	COG0590	tRNA wobble adenosine to inosine editing
JCM16456_RS11420	COG0583	DNA-binding transcription factor activity
JCM16456_RS11430	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
JCM16456_RS11460	COG0484	heat shock protein binding
JCM16456_RS11465	COG0443	Heat shock 70 kDa protein
JCM16456_RS11475	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JCM16456_RS11485	COG0497	DNA recombination
JCM16456_RS11490	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JCM16456_RS11495	COG2914	Belongs to the UPF0125 (RnfH) family
JCM16456_RS11500	COG2867	negative regulation of translational initiation
JCM16456_RS11505	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
JCM16456_RS11515	COG0582	viral genome integration into host DNA
JCM16456_RS11525	COG3550	peptidyl-serine autophosphorylation
JCM16456_RS11535	COG4774	siderophore transport
JCM16456_RS11540	COG0583	DNA-binding transcription factor activity
JCM16456_RS11545	COG0754	glutathionylspermidine amidase activity
JCM16456_RS11600	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCM16456_RS11600	COG1263	PTS System
JCM16456_RS11600	COG2190	(PTS) system
JCM16456_RS11605	COG1609	Transcriptional regulator
JCM16456_RS11700	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
JCM16456_RS11710	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JCM16456_RS11730	COG2272	Belongs to the type-B carboxylesterase lipase family
JCM16456_RS11745	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JCM16456_RS11750	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JCM16456_RS11775	COG3401	FG-GAP repeat protein
JCM16456_RS11795	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JCM16456_RS11800	COG0436	Aminotransferase
JCM16456_RS11815	COG0039	L-malate dehydrogenase activity
JCM16456_RS11820	COG4598	ABC transporter
JCM16456_RS11825	COG4160	amino acid transport
JCM16456_RS11840	COG2115	Belongs to the xylose isomerase family
JCM16456_RS11845	COG2814	Major facilitator Superfamily
JCM16456_RS11845	COG0477	Major facilitator Superfamily
JCM16456_RS11850	COG1609	Transcriptional regulator
JCM16456_RS11850	COG2207	Transcriptional regulator
JCM16456_RS11855	COG1070	Carbohydrate kinase
JCM16456_RS11860	COG0583	DNA-binding transcription factor activity
JCM16456_RS11865	COG4336	lyase activity
JCM16456_RS11870	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
JCM16456_RS11875	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
JCM16456_RS11880	COG1984	allophanate hydrolase subunit 2
JCM16456_RS11885	COG1914	H( )-stimulated, divalent metal cation uptake system
JCM16456_RS11920	COG4669	(LipO)protein
JCM16456_RS11950	COG2197	response regulator
JCM16456_RS11975	COG5002	protein histidine kinase activity
JCM16456_RS11975	COG5001	Diguanylate cyclase
JCM16456_RS11975	COG3447	MASE1 domain protein
JCM16456_RS11985	COG1157	protein secretion by the type III secretion system
JCM16456_RS12020	COG4792	protein secretion
JCM16456_RS12060	COG0402	S-adenosylhomocysteine deaminase activity
JCM16456_RS12075	COG3051	citrate lyase alpha subunit
JCM16456_RS12080	COG2301	Belongs to the HpcH HpaI aldolase family
JCM16456_RS12090	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
JCM16456_RS12100	COG3630	sodium ion export across plasma membrane
JCM16456_RS12105	COG0511	ligase activity, forming carbon-carbon bonds
JCM16456_RS12105	COG5016	pyruvate
JCM16456_RS12110	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
JCM16456_RS12120	COG4565	transcriptional regulatory protein
JCM16456_RS12130	COG0840	transmembrane signaling receptor activity
JCM16456_RS12145	COG1115	amino acid carrier protein
JCM16456_RS12155	COG1584	GPR1 FUN34 yaaH family protein
JCM16456_RS12170	COG0517	IMP dehydrogenase activity
JCM16456_RS12170	COG0516	GMP reductase activity
JCM16456_RS12185	COG1160	GTP binding
JCM16456_RS12190	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JCM16456_RS12195	COG2976	Protein conserved in bacteria
JCM16456_RS12200	COG0124	histidyl-tRNA synthetase
JCM16456_RS12205	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
JCM16456_RS12220	COG0105	UTP biosynthetic process
JCM16456_RS12225	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JCM16456_RS12230	COG2975	iron-sulfur cluster assembly
JCM16456_RS12240	COG0443	Heat shock 70 kDa protein
JCM16456_RS12255	COG0822	iron-sulfur transferase activity
JCM16456_RS12260	COG1104	cysteine desulfurase activity
JCM16456_RS12265	COG1959	2 iron, 2 sulfur cluster binding
JCM16456_RS12270	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
JCM16456_RS12275	COG0483	inositol monophosphate 1-phosphatase activity
JCM16456_RS12280	COG1335	isochorismatase
JCM16456_RS12285	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JCM16456_RS12290	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JCM16456_RS12295	COG1862	Preprotein translocase
JCM16456_RS12305	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
JCM16456_RS12310	COG0517	IMP dehydrogenase activity
JCM16456_RS12320	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
JCM16456_RS12325	COG0583	DNA-binding transcription factor activity
JCM16456_RS12330	COG0450	alkyl hydroperoxide reductase
JCM16456_RS12340	COG0704	Plays a role in the regulation of phosphate uptake
JCM16456_RS12345	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JCM16456_RS12350	COG0581	inorganic phosphate transmembrane transporter activity
JCM16456_RS12360	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
JCM16456_RS12365	COG0248	Ppx GppA phosphatase
JCM16456_RS12375	COG5002	protein histidine kinase activity
JCM16456_RS12380	COG0745	RESPONSE REGULATOR receiver
JCM16456_RS12395	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
JCM16456_RS12445	COG0542	response to heat
JCM16456_RS12455	COG0564	pseudouridine synthase activity
JCM16456_RS12460	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JCM16456_RS12465	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JCM16456_RS12470	COG1605	Chorismate mutase
JCM16456_RS12470	COG0077	Prephenate dehydratase
JCM16456_RS12475	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JCM16456_RS12480	COG5001	Diguanylate cyclase
JCM16456_RS12490	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
JCM16456_RS12500	COG0488	(ABC) transporter
JCM16456_RS12510	COG1605	Chorismate mutase
JCM16456_RS12510	COG0287	Prephenate dehydrogenase
JCM16456_RS12515	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JCM16456_RS12520	COG3275	phosphorelay sensor kinase activity
JCM16456_RS12525	COG3279	Response regulator of the LytR AlgR family
JCM16456_RS12530	COG1472	Belongs to the glycosyl hydrolase 3 family
JCM16456_RS12535	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
JCM16456_RS12540	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
JCM16456_RS12555	COG1966	Carbon starvation protein
JCM16456_RS12560	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
JCM16456_RS12565	COG1047	Peptidyl-prolyl cis-trans
JCM16456_RS12570	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JCM16456_RS12575	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JCM16456_RS12580	COG0196	riboflavin kinase activity
JCM16456_RS12585	COG0728	peptidoglycan biosynthetic process
JCM16456_RS12590	COG0268	Binds directly to 16S ribosomal RNA
JCM16456_RS12595	COG0640	Transcriptional regulator
JCM16456_RS12600	COG0583	DNA-binding transcription factor activity
JCM16456_RS12605	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JCM16456_RS12610	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JCM16456_RS12615	COG0730	response to heat
JCM16456_RS12625	COG0494	nUDIX hydrolase
JCM16456_RS12630	COG3066	DNA modification
JCM16456_RS12640	COG0667	Aldo Keto reductase
JCM16456_RS12650	COG2204	response regulator
JCM16456_RS12670	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
JCM16456_RS12675	COG0513	Belongs to the DEAD box helicase family
JCM16456_RS12700	COG3153	acetyltransferase
JCM16456_RS12705	COG3154	lipid carrier protein
JCM16456_RS12715	COG0826	peptidase U32
JCM16456_RS12720	COG0826	peptidase U32
JCM16456_RS12740	COG1185	polyribonucleotide nucleotidyltransferase activity
JCM16456_RS12745	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JCM16456_RS12755	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JCM16456_RS12760	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JCM16456_RS12765	COG0195	Participates in both transcription termination and antitermination
JCM16456_RS12770	COG0779	Required for maturation of 30S ribosomal subunits
JCM16456_RS12785	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JCM16456_RS12790	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JCM16456_RS12795	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JCM16456_RS12800	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JCM16456_RS12805	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
JCM16456_RS12810	COG1534	Rna-binding protein
JCM16456_RS12815	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JCM16456_RS12820	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
JCM16456_RS12825	COG2027	D-alanyl-D-alanine carboxypeptidase
JCM16456_RS12835	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JCM16456_RS12850	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
JCM16456_RS12855	COG0628	permease
JCM16456_RS12860	COG2813	Specifically methylates the guanine in position
JCM16456_RS12865	COG0004	ammonium transporteR
JCM16456_RS12870	COG0347	Belongs to the P(II) protein family
JCM16456_RS12875	COG3112	Uncharacterised protein family (UPF0231)
JCM16456_RS12880	COG1049	propionate catabolic process, 2-methylcitrate cycle
JCM16456_RS12885	COG1752	Esterase of the alpha-beta hydrolase superfamily
JCM16456_RS12890	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JCM16456_RS12895	COG1643	Atp-dependent helicase
JCM16456_RS12905	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JCM16456_RS12910	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JCM16456_RS12920	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JCM16456_RS12930	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
JCM16456_RS12935	COG0842	Transport permease protein
JCM16456_RS12940	COG1131	(ABC) transporter
JCM16456_RS12945	COG0288	reversible hydration of carbon dioxide
JCM16456_RS12960	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JCM16456_RS12965	COG0508	dehydrogenase complex catalyzes the overall conversion of
JCM16456_RS12970	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
JCM16456_RS12975	COG2186	Transcriptional regulator
JCM16456_RS12980	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JCM16456_RS12990	COG4974	Belongs to the 'phage' integrase family
JCM16456_RS13005	COG0157	Belongs to the NadC ModD family
JCM16456_RS13015	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JCM16456_RS13020	COG1459	type II secretion system
JCM16456_RS13035	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
JCM16456_RS13045	COG1595	DNA-templated transcription, initiation
JCM16456_RS13060	COG3220	belongs to the UPF0276 family
JCM16456_RS13085	COG3150	esterase
JCM16456_RS13095	COG3151	Protein conserved in bacteria
JCM16456_RS13100	COG0494	nUDIX hydrolase
JCM16456_RS13105	COG1538	Outer membrane efflux protein
JCM16456_RS13110	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
JCM16456_RS13110	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
JCM16456_RS13115	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
JCM16456_RS13125	COG3025	triphosphatase activity
JCM16456_RS13130	COG1392	Phosphate transport regulator
JCM16456_RS13135	COG0306	phosphate transporter
JCM16456_RS13140	COG4991	sh3 domain protein
JCM16456_RS13150	COG3409	Peptidoglycan-binding domain 1 protein
JCM16456_RS13150	COG3267	Type II secretory pathway component ExeA
JCM16456_RS13155	COG0617	tRNA 3'-terminal CCA addition
JCM16456_RS13160	COG0148	phosphopyruvate hydratase activity
JCM16456_RS13165	COG0504	CTP synthase activity
JCM16456_RS13170	COG3956	TIGRFAM MazG family protein
JCM16456_RS13175	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JCM16456_RS13180	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JCM16456_RS13195	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
JCM16456_RS13200	COG1381	Involved in DNA repair and RecF pathway recombination
JCM16456_RS13205	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JCM16456_RS13220	COG0481	GTPase activity
JCM16456_RS13225	COG3086	response to oxidative stress
JCM16456_RS13240	COG1595	DNA-templated transcription, initiation
JCM16456_RS13245	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
JCM16456_RS13255	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
JCM16456_RS13260	COG0354	folic acid binding
JCM16456_RS13275	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JCM16456_RS13280	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JCM16456_RS13285	COG3079	Belongs to the UPF0149 family
JCM16456_RS13290	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
JCM16456_RS13300	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JCM16456_RS13310	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JCM16456_RS13320	COG0028	Belongs to the TPP enzyme family
JCM16456_RS13325	COG1022	Amp-dependent synthetase and ligase
JCM16456_RS13330	COG0583	DNA-binding transcription factor activity
JCM16456_RS13345	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JCM16456_RS13350	COG0473	3-isopropylmalate dehydrogenase activity
JCM16456_RS13355	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JCM16456_RS13360	COG0066	3-isopropylmalate dehydratase activity
JCM16456_RS13410	COG0463	Glycosyl transferase, family 2
JCM16456_RS13430	COG0795	lipopolysaccharide-transporting ATPase activity
JCM16456_RS13435	COG0795	lipopolysaccharide-transporting ATPase activity
JCM16456_RS13450	COG0525	valine-tRNA ligase activity
JCM16456_RS13455	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JCM16456_RS13460	COG0564	pseudouridine synthase activity
JCM16456_RS13470	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JCM16456_RS13475	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
JCM16456_RS13480	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JCM16456_RS13490	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
JCM16456_RS13495	COG0251	oxidation-reduction process
JCM16456_RS13500	COG0204	Acyl-transferase
JCM16456_RS13505	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JCM16456_RS13510	COG5007	Belongs to the BolA IbaG family
JCM16456_RS13520	COG2854	intermembrane phospholipid transfer
JCM16456_RS13525	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JCM16456_RS13530	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
JCM16456_RS13535	COG1127	ABC transporter
JCM16456_RS13545	COG0517	IMP dehydrogenase activity
JCM16456_RS13545	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
JCM16456_RS13550	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
JCM16456_RS13560	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
JCM16456_RS13565	COG1137	ATPase activity
JCM16456_RS13575	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JCM16456_RS13580	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JCM16456_RS13585	COG1660	Displays ATPase and GTPase activities
JCM16456_RS13590	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JCM16456_RS13595	COG2239	Acts as a magnesium transporter
JCM16456_RS13600	COG0312	modulator of DNA gyrase
JCM16456_RS13605	COG3028	Belongs to the UPF0307 family
JCM16456_RS13610	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
JCM16456_RS13615	COG1178	ABC-type Fe3 transport system permease component
JCM16456_RS13620	COG4143	(ABC) transporter
JCM16456_RS13625	COG0163	prenyltransferase activity
JCM16456_RS13630	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JCM16456_RS13635	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
JCM16456_RS13645	COG2105	PFAM AIG2 family protein
JCM16456_RS13650	COG2911	Protein conserved in bacteria
JCM16456_RS13655	COG0729	surface antigen
JCM16456_RS13660	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JCM16456_RS13670	COG4181	ATPase activity
JCM16456_RS13690	COG0529	Catalyzes the synthesis of activated sulfate
JCM16456_RS13695	COG3273	potassium ion transport
JCM16456_RS13695	COG0471	metal ion transport
JCM16456_RS13700	COG2895	sulfate adenylyltransferase (ATP) activity
JCM16456_RS13705	COG0175	sulfate reduction
JCM16456_RS13710	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JCM16456_RS13710	COG1648	precorrin-2 dehydrogenase activity
JCM16456_RS13715	COG0737	Belongs to the 5'-nucleotidase family
JCM16456_RS13725	COG2153	protein acetylation
JCM16456_RS13735	COG0545	Peptidyl-prolyl cis-trans isomerase
JCM16456_RS13740	COG0203	ribosomal protein L17
JCM16456_RS13745	COG0202	RNA polymerase activity
JCM16456_RS13755	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JCM16456_RS13760	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JCM16456_RS13765	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JCM16456_RS13770	COG0201	protein transport
JCM16456_RS13775	COG0200	Binds to the 23S rRNA
JCM16456_RS13780	COG1841	ribosomal large subunit assembly
JCM16456_RS13790	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JCM16456_RS13795	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JCM16456_RS13800	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JCM16456_RS13805	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JCM16456_RS13815	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JCM16456_RS13820	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JCM16456_RS13825	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JCM16456_RS13830	COG0255	Belongs to the universal ribosomal protein uL29 family
JCM16456_RS13835	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JCM16456_RS13840	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JCM16456_RS13845	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JCM16456_RS13850	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JCM16456_RS13855	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JCM16456_RS13860	COG0089	rRNA binding
JCM16456_RS13865	COG0088	Forms part of the polypeptide exit tunnel
JCM16456_RS13870	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JCM16456_RS13875	COG0051	transcription antitermination factor activity, RNA binding
JCM16456_RS13880	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JCM16456_RS13885	COG0557	exoribonuclease II activity
JCM16456_RS13890	COG0402	S-adenosylhomocysteine deaminase activity
JCM16456_RS13895	COG1132	(ABC) transporter
JCM16456_RS13900	COG1132	(ABC) transporter
JCM16456_RS13905	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
JCM16456_RS13910	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JCM16456_RS13915	COG1446	asparaginase
JCM16456_RS13920	COG1047	Peptidyl-prolyl cis-trans
JCM16456_RS13935	COG2249	NAD(P)H dehydrogenase (quinone) activity
JCM16456_RS13940	COG0488	(ABC) transporter
JCM16456_RS13950	COG0429	hydrolase of the alpha beta-hydrolase fold
JCM16456_RS13960	COG3954	Phosphoribulokinase
JCM16456_RS13985	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JCM16456_RS14000	COG0180	Tryptophanyl-tRNA synthetase
JCM16456_RS14005	COG0546	phosphoglycolate phosphatase activity
JCM16456_RS14010	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JCM16456_RS14015	COG0338	D12 class N6 adenine-specific DNA methyltransferase
JCM16456_RS14030	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JCM16456_RS14035	COG4796	Type ii and iii secretion system protein
JCM16456_RS14060	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
JCM16456_RS14070	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JCM16456_RS14070	COG0678	peroxiredoxin activity
JCM16456_RS14075	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JCM16456_RS14085	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
JCM16456_RS14085	COG0165	Argininosuccinate lyase
JCM16456_RS14090	COG0137	argininosuccinate synthase activity
JCM16456_RS14095	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
JCM16456_RS14100	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JCM16456_RS14105	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JCM16456_RS14110	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
JCM16456_RS14120	COG1045	serine acetyltransferase
JCM16456_RS14130	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
JCM16456_RS14135	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JCM16456_RS14140	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
JCM16456_RS14145	COG1053	succinate dehydrogenase
JCM16456_RS14150	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JCM16456_RS14155	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
JCM16456_RS14165	COG0471	metal ion transport
JCM16456_RS14170	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JCM16456_RS14175	COG1509	lysine 2,3-aminomutase activity
JCM16456_RS14180	COG1285	pathogenesis
JCM16456_RS14185	COG1119	ATPase activity
JCM16456_RS14195	COG0459	protein refolding
JCM16456_RS14225	COG0149	triose-phosphate isomerase activity
JCM16456_RS14230	COG0534	Mate efflux family protein
JCM16456_RS14240	COG1575	Belongs to the MenA family. Type 1 subfamily
JCM16456_RS14245	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
JCM16456_RS14250	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
JCM16456_RS14260	COG1609	Transcriptional regulator
JCM16456_RS14265	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JCM16456_RS14275	COG0281	malic enzyme
JCM16456_RS14280	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
JCM16456_RS14285	COG0626	cystathionine gamma-synthase activity
JCM16456_RS14290	COG0460	homoserine dehydrogenase
JCM16456_RS14290	COG0527	aspartate kinase activity
JCM16456_RS14295	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
JCM16456_RS14305	COG1494	fructose-1,6-bisphosphatase
JCM16456_RS14310	COG0205	6-phosphofructokinase activity
JCM16456_RS14315	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JCM16456_RS14325	COG0745	RESPONSE REGULATOR receiver
JCM16456_RS14330	COG2205	protein histidine kinase activity
JCM16456_RS14340	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JCM16456_RS14345	COG3030	protein affecting phage T7 exclusion by the F plasmid
JCM16456_RS14350	COG3706	GGDEF domain
JCM16456_RS14355	COG1027	Aspartate ammonia-lyase
JCM16456_RS14360	COG4232	protein-disulfide reductase activity
JCM16456_RS14380	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JCM16456_RS14385	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
JCM16456_RS14390	COG0194	GDP metabolic process
JCM16456_RS14395	COG1758	RNA polymerase activity
JCM16456_RS14400	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JCM16456_RS14405	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JCM16456_RS14410	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JCM16456_RS14415	COG2233	PERMEase
JCM16456_RS14425	COG0745	RESPONSE REGULATOR receiver
JCM16456_RS14430	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JCM16456_RS14435	COG3706	GGDEF domain
JCM16456_RS14440	COG2183	response to ionizing radiation
JCM16456_RS14450	COG0596	Alpha beta hydrolase
JCM16456_RS14455	COG1040	competence protein
JCM16456_RS14465	COG0494	nUDIX hydrolase
JCM16456_RS14470	COG1218	3'(2'),5'-bisphosphate nucleotidase
JCM16456_RS14480	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
JCM16456_RS14485	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
JCM16456_RS14490	COG3156	type II secretion system protein K
JCM16456_RS14495	COG4795	General secretion pathway protein
JCM16456_RS14500	COG2165	general secretion pathway protein
JCM16456_RS14505	COG2165	general secretion pathway protein
JCM16456_RS14510	COG2165	general secretion pathway protein
JCM16456_RS14515	COG1459	type II secretion system
JCM16456_RS14520	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JCM16456_RS14530	COG3031	protein transport across the cell outer membrane
JCM16456_RS14535	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JCM16456_RS14545	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
JCM16456_RS14555	COG0456	acetyltransferase
JCM16456_RS14560	COG1490	D-aminoacyl-tRNA deacylase activity
JCM16456_RS14565	COG1295	ribonuclease BN
JCM16456_RS14575	COG0174	glutamine synthetase
JCM16456_RS14580	COG3852	Histidine kinase
JCM16456_RS14585	COG2204	response regulator
JCM16456_RS14650	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
JCM16456_RS14655	COG4206	TonB-dependent receptor
JCM16456_RS14660	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JCM16456_RS14675	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JCM16456_RS14680	COG0534	Mate efflux family protein
JCM16456_RS14690	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JCM16456_RS14695	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
JCM16456_RS14705	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
JCM16456_RS14710	COG3161	chorismate lyase activity
JCM16456_RS14715	COG1580	Controls the rotational direction of flagella during chemotaxis
JCM16456_RS14720	COG0705	Rhomboid family
JCM16456_RS14725	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JCM16456_RS14730	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JCM16456_RS14735	COG2177	Part of the ABC transporter FtsEX involved in
JCM16456_RS14740	COG2884	Cell division ATP-binding protein ftsE
JCM16456_RS14745	COG0552	protein localization to endoplasmic reticulum
JCM16456_RS14750	COG0742	ribosomal rna small subunit methyltransferase
JCM16456_RS14760	COG2095	MarC family integral membrane protein
JCM16456_RS14785	COG0783	Belongs to the Dps family
JCM16456_RS14790	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
JCM16456_RS14795	COG2267	carboxylic ester hydrolase activity
JCM16456_RS14800	COG0561	phosphatase activity
JCM16456_RS14815	COG3287	FIST C domain
JCM16456_RS14815	COG2200	EAL domain
JCM16456_RS14815	COG2199	diguanylate cyclase activity
JCM16456_RS14820	COG1011	Hydrolase
JCM16456_RS14825	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
JCM16456_RS14835	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JCM16456_RS14840	COG0019	diaminopimelate decarboxylase activity
JCM16456_RS14845	COG1965	Belongs to the frataxin family
JCM16456_RS14850	COG3072	Adenylate cyclase
JCM16456_RS14865	COG2959	enzyme of heme biosynthesis
JCM16456_RS14870	COG3071	HemY protein
JCM16456_RS14905	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JCM16456_RS14905	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JCM16456_RS14915	COG0084	hydrolase, TatD family'
JCM16456_RS14920	COG0805	protein transport
JCM16456_RS14925	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JCM16456_RS14940	COG3165	ubiquinone biosynthetic process from chorismate
JCM16456_RS14945	COG2226	methyltransferase
JCM16456_RS14950	COG1322	Protein conserved in bacteria
JCM16456_RS14970	COG2160	L-arabinose isomerase activity
JCM16456_RS14980	COG1069	ribulokinase activity
JCM16456_RS14985	COG1879	ABC-type sugar transport system periplasmic component
JCM16456_RS14990	COG1129	ABC transporter
JCM16456_RS14995	COG1172	Belongs to the binding-protein-dependent transport system permease family
JCM16456_RS15000	COG1879	ABC-type sugar transport system periplasmic component
JCM16456_RS15005	COG1129	ABC transporter
JCM16456_RS15010	COG1172	Belongs to the binding-protein-dependent transport system permease family
JCM16456_RS15015	COG1172	Belongs to the binding-protein-dependent transport system permease family
JCM16456_RS15025	COG3265	gluconokinase activity
JCM16456_RS15030	COG2610	gluconate transmembrane transporter activity
JCM16456_RS15035	COG1609	Transcriptional regulator
JCM16456_RS15040	COG2081	HI0933 family
JCM16456_RS15050	COG1528	Iron-storage protein
JCM16456_RS15055	COG0589	response to stress
JCM16456_RS15070	COG0742	ribosomal rna small subunit methyltransferase
JCM16456_RS15075	COG1522	sequence-specific DNA binding
JCM16456_RS15095	COG0006	proline dipeptidase activity
JCM16456_RS15095	COG0006	proline dipeptidase activity
JCM16456_RS15125	COG4175	Glycine betaine
JCM16456_RS15135	COG2022	thiamine diphosphate biosynthetic process
JCM16456_RS15145	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JCM16456_RS15160	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JCM16456_RS15255	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JCM16456_RS15260	COG1739	Uncharacterized protein family UPF0029
JCM16456_RS15265	COG1250	3-hydroxyacyl-CoA dehydrogenase
JCM16456_RS15265	COG1024	Enoyl-CoA hydratase
JCM16456_RS15270	COG0183	Belongs to the thiolase family
JCM16456_RS15280	COG0355	proton-transporting ATP synthase activity, rotational mechanism
JCM16456_RS15285	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JCM16456_RS15290	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JCM16456_RS15295	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JCM16456_RS15300	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JCM16456_RS15305	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JCM16456_RS15320	COG3312	ion transport
JCM16456_RS15325	COG1475	DNA binding
JCM16456_RS15330	COG1192	Involved in chromosome partitioning
JCM16456_RS15335	COG0357	Ribosomal RNA small subunit methyltransferase G
JCM16456_RS15340	COG0445	tRNA wobble uridine modification
JCM16456_RS15360	COG0217	transcriptional regulatory protein
JCM16456_RS15380	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JCM16456_RS15385	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JCM16456_RS15390	COG1845	cytochrome c oxidase, subunit III
JCM16456_RS15395	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
JCM16456_RS15410	COG2909	trisaccharide binding
JCM16456_RS15415	COG0058	SHG alpha-glucan phosphorylase activity
JCM16456_RS15420	COG1640	4-alpha-glucanotransferase
JCM16456_RS15425	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
JCM16456_RS15440	COG3501	Rhs element vgr protein
JCM16456_RS15465	COG1113	amino acid transport
JCM16456_RS15475	COG0471	metal ion transport
JCM16456_RS15480	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
JCM16456_RS15490	COG0840	transmembrane signaling receptor activity
JCM16456_RS15500	COG0010	Belongs to the arginase family
JCM16456_RS15510	COG0671	phosphoesterase, PA-phosphatase related
JCM16456_RS15530	COG0517	IMP dehydrogenase activity
JCM16456_RS15530	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
JCM16456_RS15545	COG0463	Glycosyl transferase, family 2
JCM16456_RS15600	COG3706	GGDEF domain
JCM16456_RS15610	COG3272	Protein of unknown function (DUF1722)
JCM16456_RS15615	COG0789	Transcriptional regulator
JCM16456_RS15620	COG0415	Belongs to the DNA photolyase family
JCM16456_RS15625	COG1388	LysM domain
JCM16456_RS15625	COG1376	ErfK ybiS ycfS ynhG family protein
JCM16456_RS15645	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JCM16456_RS15650	COG0573	inorganic phosphate transmembrane transporter activity
JCM16456_RS15655	COG0581	inorganic phosphate transmembrane transporter activity
JCM16456_RS15660	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JCM16456_RS15665	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
JCM16456_RS15675	COG0659	secondary active sulfate transmembrane transporter activity
JCM16456_RS15685	COG0739	heme binding
JCM16456_RS15690	COG5001	Diguanylate cyclase
JCM16456_RS15690	COG3300	MHYT domain
JCM16456_RS15695	COG0583	DNA-binding transcription factor activity
JCM16456_RS15700	COG2814	Major facilitator Superfamily
JCM16456_RS15710	COG0697	spore germination
JCM16456_RS15720	COG1764	response to oxidative stress
JCM16456_RS15725	COG1846	Transcriptional regulator
JCM16456_RS15730	COG0179	Fumarylacetoacetate (FAA) hydrolase
JCM16456_RS15740	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
JCM16456_RS15755	COG1902	pentaerythritol trinitrate reductase activity
JCM16456_RS15760	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JCM16456_RS15765	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JCM16456_RS15770	COG0534	Mate efflux family protein
JCM16456_RS15780	COG3530	Putative quorum-sensing-regulated virulence factor
JCM16456_RS15785	COG0583	DNA-binding transcription factor activity
JCM16456_RS15790	COG0730	response to heat
JCM16456_RS15795	COG0789	Transcriptional regulator
JCM16456_RS15800	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JCM16456_RS15805	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
JCM16456_RS15810	COG1464	Belongs to the NlpA lipoprotein family
JCM16456_RS15820	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JCM16456_RS15825	COG1271	oxidase subunit
JCM16456_RS15830	COG1294	oxidase, subunit
JCM16456_RS15845	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JCM16456_RS15850	COG0697	spore germination
JCM16456_RS15860	COG0402	S-adenosylhomocysteine deaminase activity
JCM16456_RS15865	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JCM16456_RS15875	COG2223	nitrite transmembrane transporter activity
JCM16456_RS15880	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JCM16456_RS15885	COG1140	nitrate reductase beta subunit
JCM16456_RS15890	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JCM16456_RS15895	COG2181	nitrate reductase activity
JCM16456_RS15900	COG2197	response regulator
JCM16456_RS15905	COG3850	Histidine kinase
JCM16456_RS15910	COG2084	Dehydrogenase
JCM16456_RS15915	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
JCM16456_RS15920	COG0583	DNA-binding transcription factor activity
JCM16456_RS15930	COG0513	Belongs to the DEAD box helicase family
JCM16456_RS15940	COG1120	ATPase activity
JCM16456_RS15960	COG2706	6-phosphogluconolactonase activity
JCM16456_RS15965	COG1609	Transcriptional regulator
JCM16456_RS15970	COG2723	6-phospho-beta-galactosidase activity
JCM16456_RS15980	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JCM16456_RS15985	COG0443	Heat shock 70 kDa protein
JCM16456_RS15990	COG2214	Heat shock protein DnaJ domain protein
JCM16456_RS16010	COG0583	DNA-binding transcription factor activity
JCM16456_RS16015	COG1012	belongs to the aldehyde dehydrogenase family
JCM16456_RS16020	COG0009	L-threonylcarbamoyladenylate synthase
JCM16456_RS16025	COG3002	Belongs to the UPF0753 family
JCM16456_RS16030	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JCM16456_RS16035	COG0583	DNA-binding transcription factor activity
JCM16456_RS16080	COG0714	Associated with various cellular activities
JCM16456_RS16100	COG3507	Belongs to the glycosyl hydrolase 43 family
JCM16456_RS16105	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
JCM16456_RS16110	COG0366	Alpha amylase catalytic
JCM16456_RS16115	COG2195	Cleaves the N-terminal amino acid of tripeptides
JCM16456_RS16125	COG3604	Transcriptional regulator
JCM16456_RS16130	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JCM16456_RS16130	COG1017	nitric oxide dioxygenase activity
JCM16456_RS16135	COG1278	Cold shock
JCM16456_RS16140	COG3036	rescue of stalled ribosome
JCM16456_RS16150	COG0583	DNA-binding transcription factor activity
JCM16456_RS16160	COG4948	Mandelate Racemase Muconate Lactonizing
JCM16456_RS16170	COG0747	negative chemotaxis
JCM16456_RS16175	COG0601	transmembrane transport
JCM16456_RS16180	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JCM16456_RS16220	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JCM16456_RS16220	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
JCM16456_RS16225	COG0516	GMP reductase activity
JCM16456_RS16230	COG4974	Belongs to the 'phage' integrase family
JCM16456_RS16265	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JCM16456_RS16320	COG2198	Histidine kinase
JCM16456_RS16320	COG5002	protein histidine kinase activity
JCM16456_RS16320	COG0784	Response regulator, receiver
JCM16456_RS16335	COG4773	Receptor
JCM16456_RS16340	COG4977	sequence-specific DNA binding
JCM16456_RS16340	COG1917	Cupin 2, conserved barrel domain protein
JCM16456_RS16345	COG2382	esterase
JCM16456_RS16350	COG1454	alcohol dehydrogenase
JCM16456_RS16365	COG2188	Transcriptional regulator
JCM16456_RS16370	COG2986	histidine ammonia-lyase
JCM16456_RS16375	COG1228	amidohydrolase
JCM16456_RS16405	COG3842	ATPase activity
JCM16456_RS16415	COG1840	ABC-type Fe3 transport system, periplasmic component
JCM16456_RS16420	COG2807	transmembrane transport
JCM16456_RS16425	COG2207	Transcriptional regulator
JCM16456_RS16460	COG0667	Aldo Keto reductase
JCM16456_RS16470	COG1349	DNA-binding transcription factor activity
JCM16456_RS16485	COG0583	DNA-binding transcription factor activity
JCM16456_RS16495	COG1979	alcohol dehydrogenase
JCM16456_RS16510	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JCM16456_RS16520	COG2814	Major facilitator Superfamily
JCM16456_RS16525	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JCM16456_RS16535	COG2197	response regulator
JCM16456_RS16540	COG3850	Histidine kinase
JCM16456_RS16550	COG2223	nitrite transmembrane transporter activity
JCM16456_RS16555	COG2146	nitrite reductase [NAD(P)H] activity
JCM16456_RS16560	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JCM16456_RS16570	COG0243	molybdopterin cofactor binding
JCM16456_RS16575	COG0488	(ABC) transporter
JCM16456_RS16580	COG2207	Transcriptional regulator
JCM16456_RS16595	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JCM16456_RS16600	COG0583	DNA-binding transcription factor activity
JCM16456_RS16610	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JCM16456_RS16615	COG4702	Belongs to the UPF0303 family
JCM16456_RS16635	COG4208	sulfate ABC transporter
JCM16456_RS16640	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
JCM16456_RS16690	COG3180	Ammonia monooxygenase
JCM16456_RS16695	COG1051	belongs to the nudix hydrolase family
JCM16456_RS16710	COG1012	belongs to the aldehyde dehydrogenase family
JCM16456_RS16735	COG4964	Belongs to the GSP D family
JCM16456_RS16805	COG4964	Belongs to the GSP D family
JCM16456_RS16855	COG2885	chlorophyll binding
JCM16456_RS16865	COG0803	Belongs to the bacterial solute-binding protein 9 family
JCM16456_RS16870	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JCM16456_RS16885	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JCM16456_RS16890	COG4533	DNA binding
JCM16456_RS16900	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JCM16456_RS16905	COG4172	Belongs to the ABC transporter superfamily
JCM16456_RS16920	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JCM16456_RS16925	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JCM16456_RS16930	COG1012	belongs to the aldehyde dehydrogenase family
JCM16456_RS16935	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JCM16456_RS16945	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JCM16456_RS16955	COG1522	sequence-specific DNA binding
JCM16456_RS16965	COG2084	Dehydrogenase
JCM16456_RS16970	COG1929	Belongs to the glycerate kinase type-1 family
JCM16456_RS16975	COG2610	gluconate transmembrane transporter activity
JCM16456_RS16980	COG4948	Mandelate Racemase Muconate Lactonizing
JCM16456_RS16985	COG3835	regulator
JCM16456_RS16990	COG0519	Catalyzes the synthesis of GMP from XMP
JCM16456_RS16990	COG0518	GMP synthase (glutamine-hydrolyzing) activity
JCM16456_RS17000	COG0583	DNA-binding transcription factor activity
JCM16456_RS17015	COG0583	DNA-binding transcription factor activity
JCM16456_RS17020	COG4771	TonB-dependent receptor
JCM16456_RS17025	COG0456	acetyltransferase
JCM16456_RS17040	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JCM16456_RS17045	COG1846	Transcriptional regulator
JCM16456_RS17095	COG0384	phenazine biosynthesis protein PhzF
JCM16456_RS17105	COG0745	RESPONSE REGULATOR receiver
JCM16456_RS17110	COG2205	protein histidine kinase activity
JCM16456_RS17115	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JCM16456_RS17150	COG1879	ABC-type sugar transport system periplasmic component
JCM16456_RS17160	COG1129	ABC transporter
JCM16456_RS17165	COG1172	Belongs to the binding-protein-dependent transport system permease family
JCM16456_RS17170	COG3959	Transketolase, thiamine diphosphate binding domain
JCM16456_RS17175	COG3958	Transketolase
JCM16456_RS17180	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JCM16456_RS17210	COG1278	Cold shock
JCM16456_RS17215	COG0598	Magnesium transport protein CorA
JCM16456_RS17220	COG2885	chlorophyll binding
JCM16456_RS17225	COG0583	DNA-binding transcription factor activity
JCM16456_RS17235	COG0488	(ABC) transporter
JCM16456_RS17240	COG3711	transcriptional antiterminator
JCM16456_RS17245	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JCM16456_RS17245	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JCM16456_RS17245	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JCM16456_RS17250	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JCM16456_RS17260	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JCM16456_RS17265	COG1349	DNA-binding transcription factor activity
JCM16456_RS17270	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
JCM16456_RS17275	COG3395	kinase activity
JCM16456_RS17280	COG1454	alcohol dehydrogenase
JCM16456_RS17285	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JCM16456_RS17290	COG2358	TRAP transporter, solute receptor (TAXI family
JCM16456_RS17305	COG2731	YhcH YjgK YiaL family protein
JCM16456_RS17320	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JCM16456_RS17325	COG0697	spore germination
JCM16456_RS17355	COG2814	Major facilitator Superfamily
JCM16456_RS17365	COG4191	Histidine kinase
JCM16456_RS17375	COG1609	Transcriptional regulator
JCM16456_RS17380	COG1234	tRNA 3'-trailer cleavage
JCM16456_RS17385	COG3842	ATPase activity
JCM16456_RS17395	COG4209	transmembrane transport
JCM16456_RS17400	COG4149	molybdate abc transporter
JCM16456_RS17415	COG2433	Pfam Transposase IS66
JCM16456_RS17430	COG1011	Hydrolase
JCM16456_RS17440	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JCM16456_RS17450	COG2723	6-phospho-beta-galactosidase activity
JCM16456_RS17485	COG1882	Formate acetyltransferase
JCM16456_RS17490	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JCM16456_RS17500	COG1280	lysine exporter protein (LysE YggA)
JCM16456_RS17515	COG3706	GGDEF domain
JCM16456_RS17530	COG1396	sequence-specific DNA binding
JCM16456_RS17550	COG1619	proteins homologs of microcin C7 resistance protein MccF
JCM16456_RS17555	COG1979	alcohol dehydrogenase
JCM16456_RS17565	COG0673	inositol 2-dehydrogenase activity
JCM16456_RS17570	COG1335	isochorismatase
JCM16456_RS17575	COG1917	Cupin 2, conserved barrel domain protein
JCM16456_RS17575	COG2207	Transcriptional regulator
JCM16456_RS17580	COG0459	protein refolding
JCM16456_RS17585	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JCM16456_RS17590	COG0697	spore germination
JCM16456_RS17595	COG2271	Major facilitator Superfamily
JCM16456_RS17600	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JCM16456_RS17620	COG1278	Cold shock
JCM16456_RS17645	COG1064	alcohol dehydrogenase
JCM16456_RS17655	COG1846	Transcriptional regulator
JCM16456_RS17655	COG1940	carbohydrate kinase activity
JCM16456_RS17660	COG3866	Pectate lyase
JCM16456_RS17780	COG1522	sequence-specific DNA binding
JCM16456_RS17805	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
JCM16456_RS17810	COG1609	Transcriptional regulator
JCM16456_RS17815	COG1447	Phosphotransferase system cellobiose-specific component IIA
JCM16456_RS17820	COG2723	6-phospho-beta-galactosidase activity
JCM16456_RS17825	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JCM16456_RS17825	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JCM16456_RS17830	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JCM16456_RS17835	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JCM16456_RS17855	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JCM16456_RS17860	COG0719	Fe-S assembly protein
JCM16456_RS17865	COG0396	ATPase activity
JCM16456_RS17870	COG0719	Fe-S assembly protein
JCM16456_RS17875	COG0316	Belongs to the HesB IscA family
JCM16456_RS17885	COG1780	Probably involved in ribonucleotide reductase function
JCM16456_RS17890	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JCM16456_RS17905	COG1785	Belongs to the alkaline phosphatase family
JCM16456_RS17910	COG0702	epimerase
JCM16456_RS17915	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JCM16456_RS17920	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
JCM16456_RS17925	COG0471	metal ion transport
JCM16456_RS17930	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
JCM16456_RS17945	COG4191	Histidine kinase
JCM16456_RS17990	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
JCM16456_RS18015	COG2207	Transcriptional regulator
JCM16456_RS18015	COG3708	Transcriptional regulator
JCM16456_RS18020	COG4774	siderophore transport
JCM16456_RS18040	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JCM16456_RS18060	COG3477	response to acidic pH
JCM16456_RS18090	COG4657	Part of a membrane complex involved in electron transport
JCM16456_RS18095	COG2878	Part of a membrane complex involved in electron transport
JCM16456_RS18100	COG4656	Part of a membrane complex involved in electron transport
JCM16456_RS18105	COG4658	electron transport chain
JCM16456_RS18130	COG4106	trans-aconitate 2-methyltransferase activity
JCM16456_RS18145	COG4974	Belongs to the 'phage' integrase family
JCM16456_RS18210	COG0531	amino acid
JCM16456_RS18225	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JCM16456_RS18240	COG1151	hydroxylamine reductase activity
JCM16456_RS18245	COG3275	phosphorelay sensor kinase activity
JCM16456_RS18250	COG3279	Response regulator of the LytR AlgR family
JCM16456_RS18255	COG2223	nitrite transmembrane transporter activity
JCM16456_RS18260	COG1716	ATPase activity
JCM16456_RS18260	COG5001	Diguanylate cyclase
JCM16456_RS18265	COG5002	protein histidine kinase activity
JCM16456_RS18265	COG2205	protein histidine kinase activity
JCM16456_RS18265	COG0784	Response regulator, receiver
JCM16456_RS18280	COG3932	Exopolysaccharide synthesis, ExoD
JCM16456_RS18285	COG1765	OsmC-like protein
JCM16456_RS18290	COG0110	maltose O-acetyltransferase activity
JCM16456_RS18310	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JCM16456_RS18320	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JCM16456_RS18325	COG3186	Phenylalanine-4-hydroxylase
JCM16456_RS18330	COG2154	pterin-4-alpha-carbinolamine dehydratase
JCM16456_RS18335	COG0456	acetyltransferase
JCM16456_RS18340	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JCM16456_RS18345	COG0662	Cupin 2, conserved barrel domain protein
JCM16456_RS18350	COG0527	aspartate kinase activity
JCM16456_RS18360	COG1609	Transcriptional regulator
JCM16456_RS18370	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
JCM16456_RS18375	COG5016	pyruvate
JCM16456_RS18375	COG0511	ligase activity, forming carbon-carbon bonds
JCM16456_RS18380	COG3630	sodium ion export across plasma membrane
JCM16456_RS18385	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
JCM16456_RS18390	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
JCM16456_RS18395	COG3273	potassium ion transport
JCM16456_RS18395	COG0471	metal ion transport
JCM16456_RS18415	COG2239	Acts as a magnesium transporter
JCM16456_RS18425	COG2113	Glycine betaine
JCM16456_RS18430	COG4176	ABC-type proline glycine betaine transport system permease component
JCM16456_RS18435	COG4175	Glycine betaine
JCM16456_RS18440	COG2113	Glycine betaine
JCM16456_RS18450	COG1166	arginine decarboxylase activity
JCM16456_RS18455	COG0010	Belongs to the arginase family
JCM16456_RS18465	COG1522	sequence-specific DNA binding
JCM16456_RS18470	COG0626	cystathionine gamma-synthase activity
JCM16456_RS18475	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JCM16456_RS18480	COG0765	amino acid transport
JCM16456_RS18535	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JCM16456_RS18545	COG0355	proton-transporting ATP synthase activity, rotational mechanism
JCM16456_RS18550	COG0840	transmembrane signaling receptor activity
JCM16456_RS18570	COG0840	transmembrane signaling receptor activity
JCM16456_RS18575	COG0121	glutamine amidotransferase
JCM16456_RS18585	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JCM16456_RS18590	COG4605	iron ion homeostasis
JCM16456_RS18595	COG4604	ABC transporter, ATP-binding protein
JCM16456_RS18600	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JCM16456_RS18615	COG1234	tRNA 3'-trailer cleavage
JCM16456_RS18625	COG0477	Major facilitator Superfamily
JCM16456_RS18635	COG0840	transmembrane signaling receptor activity
JCM16456_RS18675	COG3344	reverse transcriptase
JCM16456_RS18705	COG3344	reverse transcriptase
JCM16456_RS18710	COG2026	Addiction module toxin, RelE StbE family
JCM16456_RS18730	COG2026	Addiction module toxin, RelE StbE family
JCM16456_RS18790	COG4608	Belongs to the ABC transporter superfamily
JCM16456_RS18795	COG0444	Belongs to the ABC transporter superfamily
JCM16456_RS18800	COG4166	transmembrane transport
JCM16456_RS18805	COG4239	(ABC) transporter, permease
JCM16456_RS18810	COG4174	ABC transporter (Permease)
JCM16456_RS18815	COG4771	TonB-dependent receptor
JCM16456_RS18825	COG0811	peptide transport
JCM16456_RS18830	COG0811	peptide transport
JCM16456_RS18835	COG0848	biopolymer transport protein
JCM16456_RS18855	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JCM16456_RS18855	COG4191	Histidine kinase
JCM16456_RS18865	COG0444	Belongs to the ABC transporter superfamily
JCM16456_RS18875	COG0601	transmembrane transport
JCM16456_RS18880	COG0747	negative chemotaxis
JCM16456_RS18890	COG0583	DNA-binding transcription factor activity
JCM16456_RS18895	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
JCM16456_RS18910	COG0745	RESPONSE REGULATOR receiver
JCM16456_RS18920	COG4191	Histidine kinase
JCM16456_RS18925	COG5001	Diguanylate cyclase
JCM16456_RS18925	COG3300	MHYT domain
JCM16456_RS18945	COG0004	ammonium transporteR
JCM16456_RS18950	COG1811	Na channel or pump
JCM16456_RS18955	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JCM16456_RS18975	COG0561	phosphatase activity
JCM16456_RS18990	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
JCM16456_RS19015	COG4948	Mandelate Racemase Muconate Lactonizing
JCM16456_RS19020	COG2271	Major facilitator Superfamily
JCM16456_RS19035	COG0242	peptide deformylase activity
JCM16456_RS19060	COG1683	Conserved Protein
JCM16456_RS19070	COG3250	beta-galactosidase activity
JCM16456_RS19075	COG1247	-acetyltransferase
JCM16456_RS19095	COG2226	methyltransferase
JCM16456_RS19120	COG1328	CTP reductase activity
JCM16456_RS19125	COG0602	queuosine metabolic process
JCM16456_RS19135	COG4067	protein conserved in archaea
JCM16456_RS19135	COG0189	ligase activity
JCM16456_RS19140	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JCM16456_RS19140	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
JCM16456_RS19140	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JCM16456_RS19145	COG1105	Belongs to the carbohydrate kinase PfkB family
JCM16456_RS19150	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JCM16456_RS19150	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JCM16456_RS19155	COG1609	Transcriptional regulator
JCM16456_RS19165	COG0419	ATPase involved in DNA repair
JCM16456_RS19170	COG2205	protein histidine kinase activity
JCM16456_RS19170	COG0784	Response regulator, receiver
JCM16456_RS19185	COG0523	cobalamin synthesis protein
JCM16456_RS19190	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JCM16456_RS19220	COG0243	molybdopterin cofactor binding
JCM16456_RS19225	COG2200	EAL domain
JCM16456_RS19240	COG3038	cytochrome b561
JCM16456_RS19245	COG2353	YceI-like domain
JCM16456_RS19260	COG1979	alcohol dehydrogenase
JCM16456_RS19270	COG2814	Major facilitator Superfamily
JCM16456_RS19275	COG3593	DNA synthesis involved in DNA repair
JCM16456_RS19280	COG0737	Belongs to the 5'-nucleotidase family
JCM16456_RS19300	COG2824	Alkylphosphonate utilization operon protein PhnA
JCM16456_RS19305	COG2050	protein possibly involved in aromatic compounds catabolism
JCM16456_RS19320	COG4771	TonB-dependent receptor
JCM16456_RS19320	COG1629	transport
JCM16456_RS19325	COG0583	DNA-binding transcription factor activity
JCM16456_RS19330	COG1042	CoA-binding domain protein
JCM16456_RS19330	COG0045	succinate-CoA ligase (ADP-forming) activity
JCM16456_RS19330	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JCM16456_RS19355	COG0023	Translation Initiation Factor
JCM16456_RS19360	COG1342	Belongs to the UPF0251 family
JCM16456_RS19415	COG1450	Type ii and iii secretion system protein
JCM16456_RS19455	COG0745	RESPONSE REGULATOR receiver
JCM16456_RS19465	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
JCM16456_RS19470	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
JCM16456_RS19485	COG3706	GGDEF domain
JCM16456_RS19490	COG1309	transcriptional regulator
JCM16456_RS19515	COG2351	hydroxyisourate hydrolase activity
JCM16456_RS19520	COG0402	S-adenosylhomocysteine deaminase activity
JCM16456_RS19535	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JCM16456_RS19565	COG0765	amino acid transport
JCM16456_RS19570	COG0765	amino acid transport
JCM16456_RS19580	COG1953	Uracil, thiamine, allantoin
JCM16456_RS19600	COG2233	PERMEase
JCM16456_RS19630	COG3547	Transposase (IS116 IS110 IS902 family)
JCM16456_RS19635	COG0384	phenazine biosynthesis protein PhzF
JCM16456_RS19720	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
JCM16456_RS19730	COG1492	cobalamin metabolic process
JCM16456_RS19775	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
JCM16456_RS19800	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JCM16456_RS19825	COG0435	Glutathione S-transferase
JCM16456_RS19830	COG0400	carboxylic ester hydrolase activity
JCM16456_RS19845	COG1733	regulation of RNA biosynthetic process
JCM16456_RS19850	COG2267	carboxylic ester hydrolase activity
JCM16456_RS19870	COG1028	Short-chain dehydrogenase reductase Sdr
JCM16456_RS19885	COG0601	transmembrane transport
JCM16456_RS19890	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JCM16456_RS19895	COG0444	Belongs to the ABC transporter superfamily
JCM16456_RS19900	COG4608	Belongs to the ABC transporter superfamily
JCM16456_RS19940	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JCM16456_RS19945	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JCM16456_RS19960	COG0765	amino acid transport
JCM16456_RS19965	COG0765	amino acid transport
JCM16456_RS19975	COG2207	Transcriptional regulator
JCM16456_RS19995	COG0095	Lipoate-protein ligase
JCM16456_RS20005	COG3300	MHYT domain
JCM16456_RS20005	COG5001	Diguanylate cyclase
JCM16456_RS20010	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JCM16456_RS20020	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
JCM16456_RS20040	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JCM16456_RS20055	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JCM16456_RS20085	COG1051	belongs to the nudix hydrolase family
JCM16456_RS20115	COG2972	Histidine kinase
JCM16456_RS20130	COG1882	Formate acetyltransferase
JCM16456_RS20145	COG0656	L-ascorbic acid biosynthetic process
JCM16456_RS20150	COG2828	Protein conserved in bacteria
JCM16456_RS20195	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
JCM16456_RS20195	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JCM16456_RS20200	COG3251	PFAM MbtH domain protein
JCM16456_RS20210	COG3433	isochorismatase activity
JCM16456_RS20210	COG1535	isochorismatase
JCM16456_RS20215	COG1021	2,3-dihydroxybenzoate-AMP ligase
JCM16456_RS20220	COG1169	isochorismate synthase
JCM16456_RS20225	COG1028	Short-chain dehydrogenase reductase Sdr
JCM16456_RS20245	COG0583	DNA-binding transcription factor activity
JCM16456_RS20250	COG0513	Belongs to the DEAD box helicase family
JCM16456_RS20295	COG1294	oxidase, subunit
JCM16456_RS20300	COG1271	oxidase subunit
JCM16456_RS20310	COG0656	L-ascorbic acid biosynthetic process
JCM16456_RS20315	COG2814	Major facilitator Superfamily
JCM16456_RS20325	COG0583	DNA-binding transcription factor activity
JCM16456_RS20335	COG1501	Belongs to the glycosyl hydrolase 31 family
JCM16456_RS20340	COG2211	Major facilitator Superfamily
JCM16456_RS20355	COG0415	Belongs to the DNA photolyase family
JCM16456_RS20365	COG3458	cephalosporin-C deacetylase activity
JCM16456_RS20390	COG0024	Methionine aminopeptidase
JCM16456_RS20405	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JCM16456_RS20410	COG1477	protein flavinylation
JCM16456_RS20425	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JCM16456_RS20480	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JCM16456_RS20490	COG4172	Belongs to the ABC transporter superfamily
JCM16456_RS20495	COG4239	(ABC) transporter, permease
JCM16456_RS20500	COG4174	ABC transporter (Permease)
JCM16456_RS20505	COG4166	transmembrane transport
JCM16456_RS20515	COG2188	Transcriptional regulator
JCM16456_RS20520	COG1011	Hydrolase
JCM16456_RS20535	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
JCM16456_RS20540	COG1454	alcohol dehydrogenase
JCM16456_RS20545	COG2759	Belongs to the formate--tetrahydrofolate ligase family
JCM16456_RS20550	COG4303	Ethanolamine ammonia lyase large subunit
JCM16456_RS20555	COG4302	ethanolamine ammonia-lyase activity
JCM16456_RS20570	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JCM16456_RS20575	COG2897	thiosulfate sulfurtransferase activity
JCM16456_RS20585	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JCM16456_RS20590	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JCM16456_RS20595	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JCM16456_RS20615	COG3384	dioxygenase
JCM16456_RS20635	COG0514	ATP-dependent DNA helicase (RecQ)
JCM16456_RS20655	COG0583	DNA-binding transcription factor activity
JCM16456_RS20685	COG2814	Major facilitator Superfamily
JCM16456_RS20690	COG1566	PFAM secretion protein HlyD family protein
JCM16456_RS20715	COG2832	Protein of unknown function (DUF454)
JCM16456_RS20760	COG4964	Belongs to the GSP D family
JCM16456_RS20780	COG0745	RESPONSE REGULATOR receiver
JCM16456_RS20785	COG0642	Histidine kinase
JCM16456_RS20845	COG0748	coenzyme F420 binding
JCM16456_RS20850	COG3721	Heme iron utilization protein
JCM16456_RS20855	COG1115	amino acid carrier protein
JCM16456_RS20870	COG0840	transmembrane signaling receptor activity
JCM16456_RS20880	COG0545	Peptidyl-prolyl cis-trans isomerase
JCM16456_RS20885	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JCM16456_RS20895	COG2197	response regulator
JCM16456_RS20900	COG3850	Histidine kinase
JCM16456_RS20910	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JCM16456_RS20915	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JCM16456_RS20930	COG3706	GGDEF domain
JCM16456_RS20935	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JCM16456_RS20940	COG1609	Transcriptional regulator
JCM16456_RS20945	COG2723	6-phospho-beta-galactosidase activity
JCM16456_RS20950	COG1263	PTS System
JCM16456_RS20950	COG2190	(PTS) system
JCM16456_RS20950	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCM16456_RS20955	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JCM16456_RS20960	COG2207	Transcriptional regulator
JCM16456_RS20965	COG1979	alcohol dehydrogenase
JCM16456_RS20970	COG1803	Methylglyoxal synthase
JCM16456_RS20980	COG1335	isochorismatase
JCM16456_RS20985	COG3706	GGDEF domain
JCM16456_RS20990	COG3706	GGDEF domain
JCM16456_RS20995	COG0210	DNA helicase
JCM16456_RS21000	COG1289	transmembrane transporter activity
JCM16456_RS21020	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
JCM16456_RS21025	COG4149	molybdate abc transporter
JCM16456_RS21030	COG0725	ABC transporter, periplasmic molybdate-binding protein
JCM16456_RS21045	COG5002	protein histidine kinase activity
JCM16456_RS21045	COG0784	Response regulator, receiver
JCM16456_RS21050	COG1879	ABC-type sugar transport system periplasmic component
JCM16456_RS21060	COG2827	Endonuclease containing a URI domain
JCM16456_RS21065	COG3132	Protein of unknown function, DUF480
JCM16456_RS21085	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JCM16456_RS21090	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JCM16456_RS21095	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JCM16456_RS21100	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
JCM16456_RS21105	COG0247	lactate metabolic process
JCM16456_RS21110	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JCM16456_RS21115	COG3118	belongs to the thioredoxin family
JCM16456_RS21125	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JCM16456_RS21130	COG0604	alcohol dehydrogenase
JCM16456_RS21135	COG1309	transcriptional regulator
JCM16456_RS21140	COG4948	Mandelate Racemase Muconate Lactonizing
JCM16456_RS21145	COG1609	Transcriptional regulator
JCM16456_RS21170	COG0842	Transport permease protein
JCM16456_RS21175	COG1131	(ABC) transporter
JCM16456_RS21220	COG1028	Short-chain dehydrogenase reductase Sdr
JCM16456_RS21225	COG3193	protein, possibly involved in utilization of glycolate and propanediol
JCM16456_RS21235	COG5001	Diguanylate cyclase
JCM16456_RS21250	COG0281	malic enzyme
JCM16456_RS21260	COG3290	protein histidine kinase activity
JCM16456_RS21280	COG3507	Belongs to the glycosyl hydrolase 43 family
JCM16456_RS21285	COG0693	protein deglycase activity
JCM16456_RS21290	COG1733	regulation of RNA biosynthetic process
JCM16456_RS21320	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JCM16456_RS21325	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JCM16456_RS21340	COG1874	Beta-galactosidase
JCM16456_RS21350	COG1811	Na channel or pump
JCM16456_RS21355	COG0456	acetyltransferase
JCM16456_RS21365	COG2425	protein containing a von Willebrand factor type A (vWA) domain
JCM16456_RS21385	COG0513	Belongs to the DEAD box helicase family
JCM16456_RS21395	COG0814	amino acid
JCM16456_RS21410	COG4774	siderophore transport
JCM16456_RS21420	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JCM16456_RS21425	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
JCM16456_RS21435	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
JCM16456_RS21440	COG4181	ATPase activity
JCM16456_RS21450	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JCM16456_RS21460	COG0484	heat shock protein binding
JCM16456_RS21470	COG1324	tolerance protein
JCM16456_RS21475	COG0546	phosphoglycolate phosphatase activity
JCM16456_RS21490	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JCM16456_RS21495	COG2203	Gaf domain
JCM16456_RS21495	COG4251	negative regulation of phosphorylation
JCM16456_RS21495	COG5001	Diguanylate cyclase
JCM16456_RS21495	COG3706	GGDEF domain
JCM16456_RS21500	COG3706	GGDEF domain
JCM16456_RS21525	COG0509	glycine decarboxylation via glycine cleavage system
JCM16456_RS21530	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JCM16456_RS21530	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JCM16456_RS21535	COG0837	glucose binding
JCM16456_RS21550	COG1349	DNA-binding transcription factor activity
JCM16456_RS21575	COG1177	transmembrane transport
JCM16456_RS21585	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JCM16456_RS21590	COG1714	RDD family
JCM16456_RS21595	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JCM16456_RS21615	COG0406	alpha-ribazole phosphatase activity
JCM16456_RS21625	COG2153	protein acetylation
JCM16456_RS21630	COG2814	Major facilitator Superfamily
JCM16456_RS21640	COG0583	DNA-binding transcription factor activity
JCM16456_RS21680	COG3547	Transposase (IS116 IS110 IS902 family)
JCM16456_RS21700	COG0840	transmembrane signaling receptor activity
JCM16456_RS21725	COG0697	spore germination
JCM16456_RS21730	COG1309	transcriptional regulator
JCM16456_RS21735	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JCM16456_RS21740	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JCM16456_RS21765	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
JCM16456_RS21770	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
JCM16456_RS21775	COG4989	oxidoreductase activity
JCM16456_RS21780	COG3047	cAMP biosynthetic process
JCM16456_RS21785	COG0071	Belongs to the small heat shock protein (HSP20) family
JCM16456_RS21800	COG2205	protein histidine kinase activity
JCM16456_RS21800	COG0784	Response regulator, receiver
JCM16456_RS21800	COG5002	protein histidine kinase activity
JCM16456_RS21835	COG4305	rare lipoprotein A
JCM16456_RS21855	COG1063	alcohol dehydrogenase
JCM16456_RS21865	COG1012	belongs to the aldehyde dehydrogenase family
JCM16456_RS21870	COG3284	Transcriptional regulator
JCM16456_RS21880	COG0346	lactoylglutathione lyase activity
JCM16456_RS21890	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JCM16456_RS21895	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
JCM16456_RS21900	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JCM16456_RS21905	COG0363	glucosamine-6-phosphate deaminase activity
JCM16456_RS21915	COG0840	transmembrane signaling receptor activity
JCM16456_RS21925	COG3835	regulator
JCM16456_RS21930	COG2721	sulfolactate sulfo-lyase activity
JCM16456_RS21935	COG0840	transmembrane signaling receptor activity
JCM16456_RS21940	COG0840	transmembrane signaling receptor activity
JCM16456_RS21945	COG0748	coenzyme F420 binding
JCM16456_RS21950	COG3721	Heme iron utilization protein
JCM16456_RS21965	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JCM16456_RS21970	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
JCM16456_RS22000	COG0840	transmembrane signaling receptor activity
JCM16456_RS22050	COG0456	acetyltransferase
JCM16456_RS22050	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JCM16456_RS22060	COG1120	ATPase activity
JCM16456_RS22065	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JCM16456_RS22070	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JCM16456_RS22125	COG3217	Mosc domain protein beta barrel domain protein
JCM16456_RS22125	COG0633	Ferredoxin
JCM16456_RS22130	COG0418	dihydroorotase activity
JCM16456_RS22135	COG4221	oxidoreductase activity
JCM16456_RS22155	COG2354	Protein conserved in bacteria
JCM16456_RS22175	COG1349	DNA-binding transcription factor activity
JCM16456_RS22180	COG1607	acyl-coa hydrolase
JCM16456_RS22195	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JCM16456_RS22220	COG1028	Short-chain dehydrogenase reductase Sdr
JCM16456_RS22230	COG1917	Cupin 2, conserved barrel domain protein
JCM16456_RS22265	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
JCM16456_RS22275	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JCM16456_RS22280	COG0800	Aldolase
JCM16456_RS22300	COG4677	pectinesterase activity
JCM16456_RS22305	COG0840	transmembrane signaling receptor activity
JCM16456_RS22320	COG1175	transmembrane transport
JCM16456_RS22325	COG0395	ABC-type sugar transport system, permease component
JCM16456_RS22330	COG3842	ATPase activity
JCM16456_RS22335	COG1653	transport
JCM16456_RS22345	COG0534	Mate efflux family protein
JCM16456_RS22350	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JCM16456_RS22355	COG0823	Involved in the tonB-independent uptake of proteins
JCM16456_RS22360	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JCM16456_RS22365	COG0835	chemotaxis
JCM16456_RS22365	COG0784	Response regulator, receiver
JCM16456_RS22370	COG1846	Transcriptional regulator
JCM16456_RS22380	COG3046	protein related to deoxyribodipyrimidine photolyase
JCM16456_RS22385	COG3706	GGDEF domain
JCM16456_RS22420	COG1741	Belongs to the pirin family
JCM16456_RS22425	COG3123	guanosine phosphorylase activity
JCM16456_RS22435	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JCM16456_RS22440	COG0569	domain protein
JCM16456_RS22445	COG0668	transmembrane transport
JCM16456_RS22455	COG4948	Mandelate Racemase Muconate Lactonizing
JCM16456_RS22465	COG1115	amino acid carrier protein
JCM16456_RS22470	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JCM16456_RS22475	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JCM16456_RS22480	COG2211	Major facilitator Superfamily
JCM16456_RS22485	COG1067	ATP-dependent peptidase activity
JCM16456_RS22495	COG4172	Belongs to the ABC transporter superfamily
JCM16456_RS22515	COG5001	Diguanylate cyclase
JCM16456_RS22515	COG3447	MASE1 domain protein
JCM16456_RS22515	COG5002	protein histidine kinase activity
JCM16456_RS22520	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
JCM16456_RS22525	COG0583	DNA-binding transcription factor activity
JCM16456_RS22555	COG0604	alcohol dehydrogenase
JCM16456_RS22565	COG0583	DNA-binding transcription factor activity
JCM16456_RS22570	COG1902	pentaerythritol trinitrate reductase activity
JCM16456_RS22590	COG1609	Transcriptional regulator
JCM16456_RS22595	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JCM16456_RS22600	COG1879	ABC-type sugar transport system periplasmic component
JCM16456_RS22605	COG1172	Belongs to the binding-protein-dependent transport system permease family
JCM16456_RS22610	COG1129	ABC transporter
JCM16456_RS22665	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JCM16456_RS22685	COG1515	deoxyribonuclease V activity
JCM16456_RS22705	COG3209	COG3209 Rhs family protein
JCM16456_RS22715	COG3501	Rhs element vgr protein
JCM16456_RS22815	COG1309	transcriptional regulator
JCM16456_RS22820	COG2130	NADP-dependent
JCM16456_RS22830	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JCM16456_RS22850	COG1177	transmembrane transport
JCM16456_RS22870	COG1473	amidohydrolase
JCM16456_RS22875	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JCM16456_RS22890	COG1120	ATPase activity
JCM16456_RS22895	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JCM16456_RS22900	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JCM16456_RS22905	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
JCM16456_RS22935	COG1566	PFAM secretion protein HlyD family protein
JCM16456_RS22940	COG1846	Transcriptional regulator
JCM16456_RS22945	COG2771	luxR family
JCM16456_RS22945	COG2200	EAL domain
JCM16456_RS22955	COG0028	Belongs to the TPP enzyme family
JCM16456_RS22960	COG1301	dicarboxylic acid transport
JCM16456_RS22965	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JCM16456_RS22970	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JCM16456_RS22975	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JCM16456_RS22980	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
JCM16456_RS22985	COG2259	Doxx family
JCM16456_RS22995	COG3085	chromosome segregation
JCM16456_RS23005	COG0363	glucosamine-6-phosphate deaminase activity
JCM16456_RS23015	COG0739	heme binding
JCM16456_RS23020	COG2213	PTS system mannitol-specific
JCM16456_RS23020	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JCM16456_RS23030	COG3722	fumarate hydratase activity
JCM16456_RS23040	COG2721	sulfolactate sulfo-lyase activity
JCM16456_RS23045	COG1904	glucuronate isomerase
JCM16456_RS23050	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
JCM16456_RS23060	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JCM16456_RS23065	COG0246	Mannitol dehydrogenase
JCM16456_RS23070	COG1312	Catalyzes the dehydration of D-mannonate
JCM16456_RS23085	COG0183	Belongs to the thiolase family
JCM16456_RS23100	COG2272	Belongs to the type-B carboxylesterase lipase family
JCM16456_RS23110	COG1120	ATPase activity
JCM16456_RS23115	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JCM16456_RS23140	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JCM16456_RS23160	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JCM16456_RS23185	COG1262	PFAM Formylglycine-generating sulfatase enzyme
JCM16456_RS23200	COG1444	tRNA N-acetyltransferase activity
JCM16456_RS23205	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JCM16456_RS23420	COG2207	Transcriptional regulator
JCM16456_RS23420	COG1917	Cupin 2, conserved barrel domain protein
JCM16456_RS23425	COG3140	Belongs to the UPF0181 family
JCM16456_RS23450	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
JCM16456_RS23860	COG1794	racemase activity, acting on amino acids and derivatives