locus-tag class description JCM16456_RS00005 PF00258 Flavodoxin JCM16456_RS00010 PF10396 GTP-binding protein TrmE N-terminus JCM16456_RS00010 PF12631 MnmE helical domain JCM16456_RS00010 PF01926 50S ribosome-binding GTPase JCM16456_RS00015 PF14849 YidC periplasmic domain JCM16456_RS00015 PF02096 60Kd inner membrane protein JCM16456_RS00020 PF00825 Ribonuclease P JCM16456_RS00025 PF00468 Ribosomal protein L34 JCM16456_RS00030 PF00005 ABC transporter JCM16456_RS00035 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS00040 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCM16456_RS00045 PF11638 DnaA N-terminal domain JCM16456_RS00045 PF08299 Bacterial dnaA protein helix-turn-helix JCM16456_RS00045 PF00308 Bacterial dnaA protein JCM16456_RS00050 PF02767 DNA polymerase III beta subunit, central domain JCM16456_RS00050 PF00712 DNA polymerase III beta subunit, N-terminal domain JCM16456_RS00050 PF02768 DNA polymerase III beta subunit, C-terminal domain JCM16456_RS00055 PF02463 RecF/RecN/SMC N terminal domain JCM16456_RS00060 PF00204 DNA gyrase B JCM16456_RS00060 PF18053 DNA gyrase B subunit insert domain JCM16456_RS00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS00060 PF01751 Toprim domain JCM16456_RS00060 PF00986 DNA gyrase B subunit, carboxyl terminus JCM16456_RS00065 PF00011 Hsp20/alpha crystallin family JCM16456_RS00070 PF00155 Aminotransferase class I and II JCM16456_RS00075 PF05746 DALR anticodon binding domain JCM16456_RS00075 PF02092 Glycyl-tRNA synthetase beta subunit JCM16456_RS00080 PF02091 Glycyl-tRNA synthetase alpha subunit JCM16456_RS00085 PF01169 Uncharacterized protein family UPF0016 JCM16456_RS00095 PF01206 Sulfurtransferase TusA JCM16456_RS00100 PF00291 Pyridoxal-phosphate dependent enzyme JCM16456_RS00100 PF00585 C-terminal regulatory domain of Threonine dehydratase JCM16456_RS00105 PF00920 Dehydratase family JCM16456_RS00115 PF00205 Thiamine pyrophosphate enzyme, central domain JCM16456_RS00115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCM16456_RS00115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCM16456_RS00120 PF13335 Magnesium chelatase, subunit ChlI C-terminal JCM16456_RS00120 PF01078 Magnesium chelatase, subunit ChlI JCM16456_RS00125 PF01553 Acyltransferase JCM16456_RS00130 PF01323 DSBA-like thioredoxin domain JCM16456_RS00135 PF01636 Phosphotransferase enzyme family JCM16456_RS00140 PF06288 Protein of unknown function (DUF1040) JCM16456_RS00150 PF03006 Haemolysin-III related JCM16456_RS00160 PF02386 Cation transport protein JCM16456_RS00165 PF02254 TrkA-N domain JCM16456_RS00165 PF02080 TrkA-C domain JCM16456_RS00170 PF01029 NusB family JCM16456_RS00170 PF01189 16S rRNA methyltransferase RsmB/F JCM16456_RS00175 PF02911 Formyl transferase, C-terminal domain JCM16456_RS00175 PF00551 Formyl transferase JCM16456_RS00180 PF01327 Polypeptide deformylase JCM16456_RS00185 PF17782 DprA winged helix domain JCM16456_RS00185 PF02481 DNA recombination-mediator protein A JCM16456_RS00190 PF04361 Protein of unknown function (DUF494) JCM16456_RS00195 PF01396 Topoisomerase DNA binding C4 zinc finger JCM16456_RS00200 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JCM16456_RS00200 PF02222 ATP-grasp domain JCM16456_RS00205 PF00731 AIR carboxylase JCM16456_RS00210 PF01300 Telomere recombination JCM16456_RS00215 PF01218 Coproporphyrinogen III oxidase JCM16456_RS00220 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JCM16456_RS00220 PF01488 Shikimate / quinate 5-dehydrogenase JCM16456_RS00220 PF08501 Shikimate dehydrogenase substrate binding domain JCM16456_RS00230 PF00132 Bacterial transferase hexapeptide (six repeats) JCM16456_RS00270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS00270 PF03466 LysR substrate binding domain JCM16456_RS00275 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JCM16456_RS00275 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JCM16456_RS00280 PF04380 Membrane fusogenic activity JCM16456_RS00285 PF00873 AcrB/AcrD/AcrF family JCM16456_RS00290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCM16456_RS00295 PF00580 UvrD/REP helicase N-terminal domain JCM16456_RS00295 PF13361 UvrD-like helicase C-terminal domain JCM16456_RS00325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCM16456_RS00325 PF00005 ABC transporter JCM16456_RS00330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JCM16456_RS00335 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS00340 PF12911 N-terminal TM domain of oligopeptide transport permease C JCM16456_RS00340 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS00350 PF02321 Outer membrane efflux protein JCM16456_RS00350 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JCM16456_RS00355 PF00873 AcrB/AcrD/AcrF family JCM16456_RS00360 PF00529 HlyD membrane-fusion protein of T1SS JCM16456_RS00360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCM16456_RS00365 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCM16456_RS00365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCM16456_RS00370 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JCM16456_RS00375 PF01432 Peptidase family M3 JCM16456_RS00390 PF13361 UvrD-like helicase C-terminal domain JCM16456_RS00390 PF00580 UvrD/REP helicase N-terminal domain JCM16456_RS00400 PF01810 LysE type translocator JCM16456_RS00405 PF12833 Helix-turn-helix domain JCM16456_RS00405 PF00072 Response regulator receiver domain JCM16456_RS00410 PF00892 EamA-like transporter family JCM16456_RS00415 PF09382 RQC domain JCM16456_RS00415 PF00570 HRDC domain JCM16456_RS00415 PF00270 DEAD/DEAH box helicase JCM16456_RS00415 PF16124 RecQ zinc-binding JCM16456_RS00415 PF00271 Helicase conserved C-terminal domain JCM16456_RS00425 PF00005 ABC transporter JCM16456_RS00425 PF00664 ABC transporter transmembrane region JCM16456_RS00430 PF00005 ABC transporter JCM16456_RS00435 PF01497 Periplasmic binding protein JCM16456_RS00440 PF01032 FecCD transport family JCM16456_RS00445 PF00593 TonB dependent receptor JCM16456_RS00445 PF07715 TonB-dependent Receptor Plug Domain JCM16456_RS00450 PF00544 Pectate lyase JCM16456_RS00470 PF12833 Helix-turn-helix domain JCM16456_RS00475 PF08340 Domain of unknown function (DUF1732) JCM16456_RS00475 PF03755 YicC-like family, N-terminal region JCM16456_RS00480 PF03725 3' exoribonuclease family, domain 2 JCM16456_RS00480 PF01138 3' exoribonuclease family, domain 1 JCM16456_RS00485 PF00156 Phosphoribosyl transferase domain JCM16456_RS00490 PF03279 Bacterial lipid A biosynthesis acyltransferase JCM16456_RS00495 PF00440 Bacterial regulatory proteins, tetR family JCM16456_RS00500 PF04127 DNA / pantothenate metabolism flavoprotein JCM16456_RS00500 PF02441 Flavoprotein JCM16456_RS00505 PF17200 Single Cache domain 2 JCM16456_RS00505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS00505 PF00672 HAMP domain JCM16456_RS00510 PF04002 RadC-like JAB domain JCM16456_RS00515 PF00830 Ribosomal L28 family JCM16456_RS00520 PF00471 Ribosomal protein L33 JCM16456_RS00530 PF06827 Zinc finger found in FPG and IleRS JCM16456_RS00530 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JCM16456_RS00530 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JCM16456_RS00535 PF01370 NAD dependent epimerase/dehydratase family JCM16456_RS00540 PF01501 Glycosyl transferase family 8 JCM16456_RS00560 PF01467 Cytidylyltransferase-like JCM16456_RS00565 PF13439 Glycosyltransferase Family 4 JCM16456_RS00565 PF00534 Glycosyl transferases group 1 JCM16456_RS00570 PF00535 Glycosyl transferase family 2 JCM16456_RS00575 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JCM16456_RS00585 PF11893 Domain of unknown function (DUF3413) JCM16456_RS00585 PF00884 Sulfatase JCM16456_RS00590 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JCM16456_RS00600 PF00534 Glycosyl transferases group 1 JCM16456_RS00600 PF13439 Glycosyltransferase Family 4 JCM16456_RS00615 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JCM16456_RS00620 PF03279 Bacterial lipid A biosynthesis acyltransferase JCM16456_RS00625 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JCM16456_RS00625 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JCM16456_RS00625 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JCM16456_RS00630 PF01370 NAD dependent epimerase/dehydratase family JCM16456_RS00650 PF01531 Glycosyl transferase family 11 JCM16456_RS00660 PF00535 Glycosyl transferase family 2 JCM16456_RS00670 PF13439 Glycosyltransferase Family 4 JCM16456_RS00670 PF00534 Glycosyl transferases group 1 JCM16456_RS00680 PF02719 Polysaccharide biosynthesis protein JCM16456_RS00685 PF01370 NAD dependent epimerase/dehydratase family JCM16456_RS00690 PF02397 Bacterial sugar transferase JCM16456_RS00700 PF06082 Exopolysaccharide biosynthesis protein YbjH JCM16456_RS00720 PF02563 Polysaccharide biosynthesis/export protein JCM16456_RS00720 PF10531 SLBB domain JCM16456_RS00720 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JCM16456_RS00725 PF01451 Low molecular weight phosphotyrosine protein phosphatase JCM16456_RS00730 PF13807 G-rich domain on putative tyrosine kinase JCM16456_RS00730 PF02706 Chain length determinant protein JCM16456_RS00730 PF13614 AAA domain JCM16456_RS00735 PF16363 GDP-mannose 4,6 dehydratase JCM16456_RS00740 PF00483 Nucleotidyl transferase JCM16456_RS00745 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JCM16456_RS00750 PF01370 NAD dependent epimerase/dehydratase family JCM16456_RS00755 PF00132 Bacterial transferase hexapeptide (six repeats) JCM16456_RS00775 PF00534 Glycosyl transferases group 1 JCM16456_RS00775 PF13439 Glycosyltransferase Family 4 JCM16456_RS00780 PF00535 Glycosyl transferase family 2 JCM16456_RS00785 PF00953 Glycosyl transferase family 4 JCM16456_RS00790 PF00483 Nucleotidyl transferase JCM16456_RS00795 PF16363 GDP-mannose 4,6 dehydratase JCM16456_RS00800 PF01370 NAD dependent epimerase/dehydratase family JCM16456_RS00805 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JCM16456_RS00810 PF00293 NUDIX domain JCM16456_RS00815 PF01050 Mannose-6-phosphate isomerase JCM16456_RS00815 PF00483 Nucleotidyl transferase JCM16456_RS00820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCM16456_RS00820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCM16456_RS00820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCM16456_RS00820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCM16456_RS00825 PF01238 Phosphomannose isomerase type I JCM16456_RS00830 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCM16456_RS00830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCM16456_RS00830 PF02378 Phosphotransferase system, EIIC JCM16456_RS00835 PF12833 Helix-turn-helix domain JCM16456_RS00840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCM16456_RS00845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCM16456_RS00850 PF16363 GDP-mannose 4,6 dehydratase JCM16456_RS00855 PF02563 Polysaccharide biosynthesis/export protein JCM16456_RS00855 PF10531 SLBB domain JCM16456_RS00855 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JCM16456_RS00860 PF02706 Chain length determinant protein JCM16456_RS00860 PF13807 G-rich domain on putative tyrosine kinase JCM16456_RS00860 PF13614 AAA domain JCM16456_RS00870 PF00535 Glycosyl transferase family 2 JCM16456_RS00890 PF14602 Hexapeptide repeat of succinyl-transferase JCM16456_RS00890 PF00132 Bacterial transferase hexapeptide (six repeats) JCM16456_RS00890 PF12464 Maltose acetyltransferase JCM16456_RS00900 PF13439 Glycosyltransferase Family 4 JCM16456_RS00900 PF00534 Glycosyl transferases group 1 JCM16456_RS00905 PF00793 DAHP synthetase I family JCM16456_RS00910 PF02348 Cytidylyltransferase JCM16456_RS00915 PF00571 CBS domain JCM16456_RS00915 PF01380 SIS domain JCM16456_RS00920 PF02397 Bacterial sugar transferase JCM16456_RS00925 PF00483 Nucleotidyl transferase JCM16456_RS00935 PF00753 Metallo-beta-lactamase superfamily JCM16456_RS00935 PF10996 Beta-Casp domain JCM16456_RS00935 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JCM16456_RS00940 PF04480 Protein of unknown function (DUF559) JCM16456_RS00955 PF13533 Biotin-lipoyl like JCM16456_RS00960 PF04632 Fusaric acid resistance protein family JCM16456_RS00975 PF01464 Transglycosylase SLT domain JCM16456_RS00975 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JCM16456_RS00995 PF03167 Uracil DNA glycosylase superfamily JCM16456_RS01000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCM16456_RS01005 PF04222 Protein of unknown function (DUF416) JCM16456_RS01010 PF00367 phosphotransferase system, EIIB JCM16456_RS01010 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCM16456_RS01010 PF02378 Phosphotransferase system, EIIC JCM16456_RS01015 PF03123 CAT RNA binding domain JCM16456_RS01015 PF00874 PRD domain JCM16456_RS01020 PF00232 Glycosyl hydrolase family 1 JCM16456_RS01025 PF02264 LamB porin JCM16456_RS01025 PF11471 Maltoporin periplasmic N-terminal extension JCM16456_RS01030 PF00135 Carboxylesterase family JCM16456_RS01035 PF01595 Cyclin M transmembrane N-terminal domain JCM16456_RS01035 PF00571 CBS domain JCM16456_RS01040 PF00216 Bacterial DNA-binding protein JCM16456_RS01050 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JCM16456_RS01050 PF02843 Phosphoribosylglycinamide synthetase, C domain JCM16456_RS01050 PF02844 Phosphoribosylglycinamide synthetase, N domain JCM16456_RS01055 PF01808 AICARFT/IMPCHase bienzyme JCM16456_RS01055 PF02142 MGS-like domain JCM16456_RS01060 PF13411 MerR HTH family regulatory protein JCM16456_RS01065 PF00672 HAMP domain JCM16456_RS01065 PF17200 Single Cache domain 2 JCM16456_RS01065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS01070 PF01547 Bacterial extracellular solute-binding protein JCM16456_RS01075 PF00083 Sugar (and other) transporter JCM16456_RS01080 PF02954 Bacterial regulatory protein, Fis family JCM16456_RS01085 PF01207 Dihydrouridine synthase (Dus) JCM16456_RS01095 PF00474 Sodium:solute symporter family JCM16456_RS01105 PF00289 Biotin carboxylase, N-terminal domain JCM16456_RS01105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCM16456_RS01105 PF02785 Biotin carboxylase C-terminal domain JCM16456_RS01110 PF00364 Biotin-requiring enzyme JCM16456_RS01115 PF01220 Dehydroquinase class II JCM16456_RS01120 PF13193 AMP-binding enzyme C-terminal domain JCM16456_RS01120 PF00501 AMP-binding enzyme JCM16456_RS01120 PF16177 Acetyl-coenzyme A synthetase N-terminus JCM16456_RS01135 PF12832 MFS_1 like family JCM16456_RS01140 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS01140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS01140 PF09456 RcsC Alpha-Beta-Loop (ABL) JCM16456_RS01140 PF00072 Response regulator receiver domain JCM16456_RS01145 PF02541 Ppx/GppA phosphatase family JCM16456_RS01150 PF00271 Helicase conserved C-terminal domain JCM16456_RS01150 PF00270 DEAD/DEAH box helicase JCM16456_RS01155 PF00085 Thioredoxin JCM16456_RS01160 PF07498 Rho termination factor, N-terminal domain JCM16456_RS01160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCM16456_RS01160 PF07497 Rho termination factor, RNA-binding domain JCM16456_RS01170 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JCM16456_RS01180 PF00175 Oxidoreductase NAD-binding domain JCM16456_RS01235 PF13091 PLD-like domain JCM16456_RS01245 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JCM16456_RS01245 PF01565 FAD binding domain JCM16456_RS01250 PF08279 HTH domain JCM16456_RS01250 PF03099 Biotin/lipoate A/B protein ligase family JCM16456_RS01250 PF02237 Biotin protein ligase C terminal domain JCM16456_RS01255 PF00485 Phosphoribulokinase / Uridine kinase family JCM16456_RS01280 PF03143 Elongation factor Tu C-terminal domain JCM16456_RS01280 PF03144 Elongation factor Tu domain 2 JCM16456_RS01280 PF00009 Elongation factor Tu GTP binding domain JCM16456_RS01285 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JCM16456_RS01290 PF00467 KOW motif JCM16456_RS01290 PF02357 Transcription termination factor nusG JCM16456_RS01295 PF00298 Ribosomal protein L11, RNA binding domain JCM16456_RS01295 PF03946 Ribosomal protein L11, N-terminal domain JCM16456_RS01300 PF00687 Ribosomal protein L1p/L10e family JCM16456_RS01305 PF00466 Ribosomal protein L10 JCM16456_RS01310 PF16320 Ribosomal protein L7/L12 dimerisation domain JCM16456_RS01310 PF00542 Ribosomal protein L7/L12 C-terminal domain JCM16456_RS01315 PF04560 RNA polymerase Rpb2, domain 7 JCM16456_RS01315 PF00562 RNA polymerase Rpb2, domain 6 JCM16456_RS01315 PF10385 RNA polymerase beta subunit external 1 domain JCM16456_RS01315 PF04565 RNA polymerase Rpb2, domain 3 JCM16456_RS01315 PF04561 RNA polymerase Rpb2, domain 2 JCM16456_RS01315 PF04563 RNA polymerase beta subunit JCM16456_RS01320 PF04997 RNA polymerase Rpb1, domain 1 JCM16456_RS01320 PF00623 RNA polymerase Rpb1, domain 2 JCM16456_RS01320 PF04998 RNA polymerase Rpb1, domain 5 JCM16456_RS01320 PF04983 RNA polymerase Rpb1, domain 3 JCM16456_RS01320 PF05000 RNA polymerase Rpb1, domain 4 JCM16456_RS01325 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ JCM16456_RS01330 PF00293 NUDIX domain JCM16456_RS01330 PF09297 NADH pyrophosphatase zinc ribbon domain JCM16456_RS01335 PF01208 Uroporphyrinogen decarboxylase (URO-D) JCM16456_RS01340 PF08360 QacR-like protein, C-terminal region JCM16456_RS01340 PF00440 Bacterial regulatory proteins, tetR family JCM16456_RS01350 PF01551 Peptidase family M23 JCM16456_RS01355 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JCM16456_RS01355 PF01676 Metalloenzyme superfamily JCM16456_RS01365 PF02666 Phosphatidylserine decarboxylase JCM16456_RS01370 PF03193 RsgA GTPase JCM16456_RS01375 PF00929 Exonuclease JCM16456_RS01440 PF08331 Domain of unknown function (DUF1730) JCM16456_RS01445 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JCM16456_RS01450 PF01520 N-acetylmuramoyl-L-alanine amidase JCM16456_RS01455 PF01119 DNA mismatch repair protein, C-terminal domain JCM16456_RS01455 PF08676 MutL C terminal dimerisation domain JCM16456_RS01465 PF17209 Hfq protein JCM16456_RS01470 PF13167 GTP-binding GTPase N-terminal JCM16456_RS01470 PF16360 GTP-binding GTPase Middle Region JCM16456_RS01470 PF01926 50S ribosome-binding GTPase JCM16456_RS01475 PF01145 SPFH domain / Band 7 family JCM16456_RS01475 PF12221 Bacterial membrane protein N terminal JCM16456_RS01480 PF01145 SPFH domain / Band 7 family JCM16456_RS01485 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) JCM16456_RS01490 PF04102 SlyX JCM16456_RS01500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCM16456_RS01500 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JCM16456_RS01505 PF08348 YheO-like PAS domain JCM16456_RS01505 PF13309 HTH domain JCM16456_RS01510 PF02635 DsrE/DsrF-like family JCM16456_RS01515 PF02635 DsrE/DsrF-like family JCM16456_RS01525 PF00164 Ribosomal protein S12/S23 JCM16456_RS01530 PF00177 Ribosomal protein S7p/S5e JCM16456_RS01535 PF03764 Elongation factor G, domain IV JCM16456_RS01535 PF03144 Elongation factor Tu domain 2 JCM16456_RS01535 PF14492 Elongation Factor G, domain II JCM16456_RS01535 PF00009 Elongation factor Tu GTP binding domain JCM16456_RS01535 PF00679 Elongation factor G C-terminus JCM16456_RS01540 PF03143 Elongation factor Tu C-terminal domain JCM16456_RS01540 PF03144 Elongation factor Tu domain 2 JCM16456_RS01540 PF00009 Elongation factor Tu GTP binding domain JCM16456_RS01545 PF04324 BFD-like [2Fe-2S] binding domain JCM16456_RS01550 PF00210 Ferritin-like domain JCM16456_RS01555 PF01250 Ribosomal protein S6 JCM16456_RS01560 PF01084 Ribosomal protein S18 JCM16456_RS01565 PF01281 Ribosomal protein L9, N-terminal domain JCM16456_RS01565 PF03948 Ribosomal protein L9, C-terminal domain JCM16456_RS01570 PF04338 Protein of unknown function, DUF481 JCM16456_RS01575 PF00772 DnaB-like helicase N terminal domain JCM16456_RS01575 PF03796 DnaB-like helicase C terminal domain JCM16456_RS01580 PF01168 Alanine racemase, N-terminal domain JCM16456_RS01580 PF00842 Alanine racemase, C-terminal domain JCM16456_RS01585 PF01894 Uncharacterised protein family UPF0047 JCM16456_RS01590 PF00342 Phosphoglucose isomerase JCM16456_RS01600 PF01475 Ferric uptake regulator family JCM16456_RS01605 PF01207 Dihydrouridine synthase (Dus) JCM16456_RS01625 PF00258 Flavodoxin JCM16456_RS01625 PF00667 FAD binding domain JCM16456_RS01625 PF00175 Oxidoreductase NAD-binding domain JCM16456_RS01630 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JCM16456_RS01630 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JCM16456_RS01635 PF01507 Phosphoadenosine phosphosulfate reductase family JCM16456_RS01680 PF02253 Phospholipase A1 JCM16456_RS01685 PF00999 Sodium/hydrogen exchanger family JCM16456_RS01690 PF00809 Pterin binding enzyme JCM16456_RS01690 PF02574 Homocysteine S-methyltransferase JCM16456_RS01690 PF02965 Vitamin B12 dependent methionine synthase, activation domain JCM16456_RS01690 PF02607 B12 binding domain JCM16456_RS01690 PF02310 B12 binding domain JCM16456_RS01695 PF01842 ACT domain JCM16456_RS01695 PF00696 Amino acid kinase family JCM16456_RS01700 PF00266 Aminotransferase class-V JCM16456_RS01710 PF17760 UvrA interaction domain JCM16456_RS01710 PF17755 UvrA DNA-binding domain JCM16456_RS01710 PF00005 ABC transporter JCM16456_RS01715 PF00483 Nucleotidyl transferase JCM16456_RS01720 PF00196 Bacterial regulatory proteins, luxR family JCM16456_RS01725 PF00436 Single-strand binding protein family JCM16456_RS01730 PF01051 Initiator Replication protein JCM16456_RS01745 PF00563 EAL domain JCM16456_RS01745 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS01745 PF17157 Gammaproteobacterial periplasmic sensor domain JCM16456_RS01765 PF03958 Bacterial type II/III secretion system short domain JCM16456_RS01765 PF00263 Bacterial type II and III secretion system protein JCM16456_RS01770 PF13401 AAA domain JCM16456_RS01770 PF01471 Putative peptidoglycan binding domain JCM16456_RS01780 PF00437 Type II/IV secretion system protein JCM16456_RS01780 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JCM16456_RS01785 PF00482 Type II secretion system (T2SS), protein F JCM16456_RS01795 PF07963 Prokaryotic N-terminal methylation motif JCM16456_RS01800 PF07963 Prokaryotic N-terminal methylation motif JCM16456_RS01800 PF00114 Pilin (bacterial filament) JCM16456_RS01835 PF04085 rod shape-determining protein MreC JCM16456_RS01840 PF04093 rod shape-determining protein MreD JCM16456_RS01845 PF02545 Maf-like protein JCM16456_RS01850 PF10150 Ribonuclease E/G family JCM16456_RS01850 PF00575 S1 RNA binding domain JCM16456_RS01855 PF13502 AsmA-like C-terminal region JCM16456_RS01855 PF13116 Protein of unknown function JCM16456_RS01860 PF00795 Carbon-nitrogen hydrolase JCM16456_RS01865 PF01523 Putative modulator of DNA gyrase JCM16456_RS01870 PF06877 Regulator of ribonuclease activity B JCM16456_RS01885 PF16868 NMT1-like family JCM16456_RS01890 PF01316 Arginine repressor, DNA binding domain JCM16456_RS01890 PF02863 Arginine repressor, C-terminal domain JCM16456_RS01895 PF00056 lactate/malate dehydrogenase, NAD binding domain JCM16456_RS01895 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JCM16456_RS01900 PF00348 Polyprenyl synthetase JCM16456_RS01905 PF00829 Ribosomal prokaryotic L21 protein JCM16456_RS01910 PF01016 Ribosomal L27 protein JCM16456_RS01915 PF01926 50S ribosome-binding GTPase JCM16456_RS01915 PF01018 GTP1/OBG JCM16456_RS01920 PF06738 Putative threonine/serine exporter JCM16456_RS01925 PF12821 Threonine/Serine exporter, ThrE JCM16456_RS01925 PF06738 Putative threonine/serine exporter JCM16456_RS01930 PF00186 Dihydrofolate reductase JCM16456_RS01935 PF00149 Calcineurin-like phosphoesterase JCM16456_RS01940 PF04379 ApaG domain JCM16456_RS01945 PF00398 Ribosomal RNA adenine dimethylase JCM16456_RS01950 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JCM16456_RS01955 PF09312 SurA N-terminal domain JCM16456_RS01955 PF00639 PPIC-type PPIASE domain JCM16456_RS01960 PF03968 OstA-like protein JCM16456_RS01960 PF04453 LPS transport system D JCM16456_RS01965 PF05099 Tellurite resistance protein TerB JCM16456_RS01965 PF00226 DnaJ domain JCM16456_RS02015 PF01464 Transglycosylase SLT domain JCM16456_RS02015 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JCM16456_RS02020 PF04362 Bacterial Fe(2+) trafficking JCM16456_RS02025 PF14815 NUDIX domain JCM16456_RS02025 PF00730 HhH-GPD superfamily base excision DNA repair protein JCM16456_RS02025 PF00633 Helix-hairpin-helix motif JCM16456_RS02030 PF02390 Putative methyltransferase JCM16456_RS02035 PF04960 Glutaminase JCM16456_RS02040 PF06969 HemN C-terminal domain JCM16456_RS02040 PF04055 Radical SAM superfamily JCM16456_RS02045 PF01725 Ham1 family JCM16456_RS02050 PF02594 Uncharacterised ACR, YggU family COG1872 JCM16456_RS02055 PF02325 YGGT family JCM16456_RS02060 PF14748 Pyrroline-5-carboxylate reductase dimerisation JCM16456_RS02060 PF03807 NADP oxidoreductase coenzyme F420-dependent JCM16456_RS02065 PF01168 Alanine racemase, N-terminal domain JCM16456_RS02070 PF00437 Type II/IV secretion system protein JCM16456_RS02075 PF00437 Type II/IV secretion system protein JCM16456_RS02080 PF03652 Holliday junction resolvase JCM16456_RS02085 PF02622 Uncharacterized ACR, COG1678 JCM16456_RS02090 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JCM16456_RS02090 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JCM16456_RS02095 PF04452 RNA methyltransferase JCM16456_RS02100 PF04231 Endonuclease I JCM16456_RS02110 PF17283 SprT-like zinc ribbon domain JCM16456_RS02110 PF10263 SprT-like family JCM16456_RS02115 PF00438 S-adenosylmethionine synthetase, N-terminal domain JCM16456_RS02115 PF02772 S-adenosylmethionine synthetase, central domain JCM16456_RS02115 PF02773 S-adenosylmethionine synthetase, C-terminal domain JCM16456_RS02120 PF00456 Transketolase, thiamine diphosphate binding domain JCM16456_RS02120 PF02779 Transketolase, pyrimidine binding domain JCM16456_RS02120 PF02780 Transketolase, C-terminal domain JCM16456_RS02125 PF07715 TonB-dependent Receptor Plug Domain JCM16456_RS02125 PF00593 TonB dependent receptor JCM16456_RS02130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS02130 PF03466 LysR substrate binding domain JCM16456_RS02135 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JCM16456_RS02135 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JCM16456_RS02140 PF00162 Phosphoglycerate kinase JCM16456_RS02145 PF01116 Fructose-bisphosphate aldolase class-II JCM16456_RS02150 PF05552 Conserved TM helix JCM16456_RS02150 PF00924 Mechanosensitive ion channel JCM16456_RS02155 PF01810 LysE type translocator JCM16456_RS02160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS02160 PF03466 LysR substrate binding domain JCM16456_RS02170 PF08448 PAS fold JCM16456_RS02170 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS02175 PF02887 Pyruvate kinase, alpha/beta domain JCM16456_RS02175 PF00224 Pyruvate kinase, barrel domain JCM16456_RS02180 PF00455 DeoR C terminal sensor domain JCM16456_RS02180 PF08220 DeoR-like helix-turn-helix domain JCM16456_RS02185 PF01380 SIS domain JCM16456_RS02195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS02195 PF03466 LysR substrate binding domain JCM16456_RS02200 PF00881 Nitroreductase family JCM16456_RS02210 PF03466 LysR substrate binding domain JCM16456_RS02210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS02220 PF00295 Glycosyl hydrolases family 28 JCM16456_RS02225 PF12798 4Fe-4S binding domain JCM16456_RS02225 PF00037 4Fe-4S binding domain JCM16456_RS02230 PF00361 Proton-conducting membrane transporter JCM16456_RS02235 PF00146 NADH dehydrogenase JCM16456_RS02240 PF00361 Proton-conducting membrane transporter JCM16456_RS02240 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JCM16456_RS02245 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JCM16456_RS02250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JCM16456_RS02250 PF00361 Proton-conducting membrane transporter JCM16456_RS02255 PF00374 Nickel-dependent hydrogenase JCM16456_RS02255 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JCM16456_RS02255 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JCM16456_RS02260 PF12838 4Fe-4S dicluster domain JCM16456_RS02265 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JCM16456_RS02270 PF07450 Formate hydrogenlyase maturation protein HycH JCM16456_RS02275 PF01750 Hydrogenase maturation protease JCM16456_RS02280 PF13247 4Fe-4S dicluster domain JCM16456_RS02280 PF12800 4Fe-4S binding domain JCM16456_RS02285 PF00384 Molybdopterin oxidoreductase JCM16456_RS02285 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JCM16456_RS02285 PF01568 Molydopterin dinucleotide binding domain JCM16456_RS02290 PF02954 Bacterial regulatory protein, Fis family JCM16456_RS02290 PF00158 Sigma-54 interaction domain JCM16456_RS02290 PF01590 GAF domain JCM16456_RS02295 PF02634 FdhD/NarQ family JCM16456_RS02300 PF00708 Acylphosphatase JCM16456_RS02300 PF07503 HypF finger JCM16456_RS02300 PF01300 Telomere recombination JCM16456_RS02300 PF17788 HypF Kae1-like domain JCM16456_RS02305 PF01455 HupF/HypC family JCM16456_RS02310 PF01924 Hydrogenase formation hypA family JCM16456_RS02315 PF02769 AIR synthase related protein, C-terminal domain JCM16456_RS02315 PF00586 AIR synthase related protein, N-terminal domain JCM16456_RS02320 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA JCM16456_RS02325 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCM16456_RS02335 PF00171 Aldehyde dehydrogenase family JCM16456_RS02340 PF00883 Cytosol aminopeptidase family, catalytic domain JCM16456_RS02340 PF02789 Cytosol aminopeptidase family, N-terminal domain JCM16456_RS02345 PF00043 Glutathione S-transferase, C-terminal domain JCM16456_RS02345 PF02798 Glutathione S-transferase, N-terminal domain JCM16456_RS02350 PF03466 LysR substrate binding domain JCM16456_RS02350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS02365 PF13657 HipA N-terminal domain JCM16456_RS02365 PF07804 HipA-like C-terminal domain JCM16456_RS02380 PF03979 Sigma-70 factor, region 1.1 JCM16456_RS02380 PF04546 Sigma-70, non-essential region JCM16456_RS02380 PF04545 Sigma-70, region 4 JCM16456_RS02380 PF04539 Sigma-70 region 3 JCM16456_RS02380 PF04542 Sigma-70 region 2 JCM16456_RS02380 PF00140 Sigma-70 factor, region 1.2 JCM16456_RS02385 PF10410 DnaB-helicase binding domain of primase JCM16456_RS02385 PF08278 DNA primase DnaG DnaB-binding JCM16456_RS02385 PF01807 CHC2 zinc finger JCM16456_RS02385 PF08275 DNA primase catalytic core, N-terminal domain JCM16456_RS02390 PF09424 Yqey-like protein JCM16456_RS02395 PF01165 Ribosomal protein S21 JCM16456_RS02400 PF00814 Glycoprotease family JCM16456_RS02405 PF00561 alpha/beta hydrolase fold JCM16456_RS02405 PF00364 Biotin-requiring enzyme JCM16456_RS02410 PF02660 Glycerol-3-phosphate acyltransferase JCM16456_RS02415 PF02152 Dihydroneopterin aldolase JCM16456_RS02420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JCM16456_RS02425 PF02673 Bacitracin resistance protein BacA JCM16456_RS02430 PF04977 Septum formation initiator JCM16456_RS02435 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JCM16456_RS02440 PF02542 YgbB family JCM16456_RS02445 PF01142 tRNA pseudouridine synthase D (TruD) JCM16456_RS02450 PF01975 Survival protein SurE JCM16456_RS02460 PF01476 LysM domain JCM16456_RS02460 PF01551 Peptidase family M23 JCM16456_RS02465 PF00140 Sigma-70 factor, region 1.2 JCM16456_RS02465 PF04542 Sigma-70 region 2 JCM16456_RS02465 PF04539 Sigma-70 region 3 JCM16456_RS02465 PF04545 Sigma-70, region 4 JCM16456_RS02470 PF05188 MutS domain II JCM16456_RS02470 PF01624 MutS domain I JCM16456_RS02470 PF05192 MutS domain III JCM16456_RS02470 PF05190 MutS family domain IV JCM16456_RS02470 PF00488 MutS domain V JCM16456_RS02475 PF02464 Competence-damaged protein JCM16456_RS02480 PF00154 recA bacterial DNA recombination protein JCM16456_RS02485 PF02631 RecX family JCM16456_RS02490 PF01411 tRNA synthetases class II (A) JCM16456_RS02490 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JCM16456_RS02490 PF02272 DHHA1 domain JCM16456_RS02495 PF00696 Amino acid kinase family JCM16456_RS02495 PF01842 ACT domain JCM16456_RS02495 PF13840 ACT domain JCM16456_RS02500 PF02599 Global regulator protein family JCM16456_RS02545 PF04277 Oxaloacetate decarboxylase, gamma chain JCM16456_RS02550 PF02436 Conserved carboxylase domain JCM16456_RS02550 PF00682 HMGL-like JCM16456_RS02550 PF00364 Biotin-requiring enzyme JCM16456_RS02555 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit JCM16456_RS02560 PF00107 Zinc-binding dehydrogenase JCM16456_RS02560 PF08240 Alcohol dehydrogenase GroES-like domain JCM16456_RS02565 PF09335 SNARE associated Golgi protein JCM16456_RS02570 PF00675 Insulinase (Peptidase family M16) JCM16456_RS02570 PF05193 Peptidase M16 inactive domain JCM16456_RS02575 PF04262 Glutamate-cysteine ligase JCM16456_RS02585 PF02664 S-Ribosylhomocysteinase (LuxS) JCM16456_RS02590 PF00571 CBS domain JCM16456_RS02590 PF03471 Transporter associated domain JCM16456_RS02590 PF01595 Cyclin M transmembrane N-terminal domain JCM16456_RS02595 PF01578 Cytochrome C assembly protein JCM16456_RS02600 PF02978 Signal peptide binding domain JCM16456_RS02600 PF00448 SRP54-type protein, GTPase domain JCM16456_RS02600 PF02881 SRP54-type protein, helical bundle domain JCM16456_RS02605 PF00886 Ribosomal protein S16 JCM16456_RS02610 PF05239 PRC-barrel domain JCM16456_RS02610 PF01782 RimM N-terminal domain JCM16456_RS02615 PF01746 tRNA (Guanine-1)-methyltransferase JCM16456_RS02620 PF01245 Ribosomal protein L19 JCM16456_RS02625 PF13180 PDZ domain JCM16456_RS02630 PF00595 PDZ domain JCM16456_RS02635 PF06295 Protein of unknown function (DUF1043) JCM16456_RS02640 PF03969 AFG1-like ATPase JCM16456_RS02645 PF00572 Ribosomal protein L13 JCM16456_RS02650 PF00380 Ribosomal protein S9/S16 JCM16456_RS02655 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal JCM16456_RS02655 PF00355 Rieske [2Fe-2S] domain JCM16456_RS02660 PF00032 Cytochrome b(C-terminal)/b6/petD JCM16456_RS02660 PF00033 Cytochrome b/b6/petB JCM16456_RS02665 PF02167 Cytochrome C1 family JCM16456_RS02670 PF00043 Glutathione S-transferase, C-terminal domain JCM16456_RS02670 PF02798 Glutathione S-transferase, N-terminal domain JCM16456_RS02675 PF04386 Stringent starvation protein B JCM16456_RS02680 PF04972 BON domain JCM16456_RS02685 PF13580 SIS domain JCM16456_RS02690 PF02021 Uncharacterised protein family UPF0102 JCM16456_RS02695 PF04348 LppC putative lipoprotein JCM16456_RS02700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCM16456_RS02710 PF01795 MraW methylase family JCM16456_RS02715 PF04999 Cell division protein FtsL JCM16456_RS02720 PF03717 Penicillin-binding Protein dimerisation domain JCM16456_RS02720 PF00905 Penicillin binding protein transpeptidase domain JCM16456_RS02725 PF02875 Mur ligase family, glutamate ligase domain JCM16456_RS02725 PF08245 Mur ligase middle domain JCM16456_RS02725 PF01225 Mur ligase family, catalytic domain JCM16456_RS02730 PF01225 Mur ligase family, catalytic domain JCM16456_RS02730 PF02875 Mur ligase family, glutamate ligase domain JCM16456_RS02730 PF08245 Mur ligase middle domain JCM16456_RS02735 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JCM16456_RS02735 PF00953 Glycosyl transferase family 4 JCM16456_RS02740 PF08245 Mur ligase middle domain JCM16456_RS02740 PF02875 Mur ligase family, glutamate ligase domain JCM16456_RS02745 PF01098 Cell cycle protein JCM16456_RS02750 PF04101 Glycosyltransferase family 28 C-terminal domain JCM16456_RS02750 PF03033 Glycosyltransferase family 28 N-terminal domain JCM16456_RS02755 PF01225 Mur ligase family, catalytic domain JCM16456_RS02755 PF02875 Mur ligase family, glutamate ligase domain JCM16456_RS02755 PF08245 Mur ligase middle domain JCM16456_RS02760 PF08478 POTRA domain, FtsQ-type JCM16456_RS02760 PF03799 Cell division protein FtsQ JCM16456_RS02765 PF02491 SHS2 domain inserted in FTSA JCM16456_RS02770 PF12327 FtsZ family, C-terminal domain JCM16456_RS02770 PF00091 Tubulin/FtsZ family, GTPase domain JCM16456_RS02775 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JCM16456_RS02780 PF02810 SEC-C motif JCM16456_RS02780 PF07517 SecA DEAD-like domain JCM16456_RS02780 PF07516 SecA Wing and Scaffold domain JCM16456_RS02780 PF01043 SecA preprotein cross-linking domain JCM16456_RS02785 PF00293 NUDIX domain JCM16456_RS02790 PF05173 Dihydrodipicolinate reductase, C-terminus JCM16456_RS02790 PF01113 Dihydrodipicolinate reductase, N-terminus JCM16456_RS02795 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JCM16456_RS02795 PF00117 Glutamine amidotransferase class-I JCM16456_RS02800 PF02142 MGS-like domain JCM16456_RS02800 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JCM16456_RS02800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCM16456_RS02805 PF01925 Sulfite exporter TauE/SafE JCM16456_RS02810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS02810 PF03466 LysR substrate binding domain JCM16456_RS02815 PF08543 Phosphomethylpyrimidine kinase JCM16456_RS02820 PF03458 UPF0126 domain JCM16456_RS02825 PF01497 Periplasmic binding protein JCM16456_RS02830 PF03186 CobD/Cbib protein JCM16456_RS02835 PF01048 Phosphorylase superfamily JCM16456_RS02845 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JCM16456_RS02845 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCM16456_RS02850 PF01645 Conserved region in glutamate synthase JCM16456_RS02850 PF00310 Glutamine amidotransferases class-II JCM16456_RS02850 PF04898 Glutamate synthase central domain JCM16456_RS02850 PF01493 GXGXG motif JCM16456_RS02855 PF16199 Radical_SAM C-terminal domain JCM16456_RS02855 PF04055 Radical SAM superfamily JCM16456_RS02865 PF12833 Helix-turn-helix domain JCM16456_RS02870 PF00171 Aldehyde dehydrogenase family JCM16456_RS02870 PF00465 Iron-containing alcohol dehydrogenase JCM16456_RS02875 PF18415 Histidine kinase receptor ArcB trans-membrane domain JCM16456_RS02875 PF01627 Hpt domain JCM16456_RS02875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS02875 PF00072 Response regulator receiver domain JCM16456_RS02875 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS02875 PF00989 PAS fold JCM16456_RS02885 PF00072 Response regulator receiver domain JCM16456_RS02885 PF00486 Transcriptional regulatory protein, C terminal JCM16456_RS02895 PF03737 Aldolase/RraA JCM16456_RS02905 PF00742 Homoserine dehydrogenase JCM16456_RS02905 PF13840 ACT domain JCM16456_RS02905 PF03447 Homoserine dehydrogenase, NAD binding domain JCM16456_RS02905 PF00696 Amino acid kinase family JCM16456_RS02905 PF01842 ACT domain JCM16456_RS02910 PF00288 GHMP kinases N terminal domain JCM16456_RS02910 PF08544 GHMP kinases C terminal JCM16456_RS02915 PF00291 Pyridoxal-phosphate dependent enzyme JCM16456_RS02915 PF14821 Threonine synthase N terminus JCM16456_RS02920 PF01228 Glycine radical JCM16456_RS02925 PF01261 Xylose isomerase-like TIM barrel JCM16456_RS02930 PF03167 Uracil DNA glycosylase superfamily JCM16456_RS02945 PF01235 Sodium:alanine symporter family JCM16456_RS02950 PF03883 Peroxide stress protein YaaA JCM16456_RS02955 PF01026 TatD related DNase JCM16456_RS02960 PF02653 Branched-chain amino acid transport system / permease component JCM16456_RS02965 PF02653 Branched-chain amino acid transport system / permease component JCM16456_RS02970 PF00005 ABC transporter JCM16456_RS02975 PF02608 ABC transporter substrate-binding protein PnrA-like JCM16456_RS02980 PF07662 Na+ dependent nucleoside transporter C-terminus JCM16456_RS02980 PF07670 Nucleoside recognition JCM16456_RS02980 PF01773 Na+ dependent nucleoside transporter N-terminus JCM16456_RS02985 PF01791 DeoC/LacD family aldolase JCM16456_RS02990 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JCM16456_RS02990 PF00591 Glycosyl transferase family, a/b domain JCM16456_RS02990 PF02885 Glycosyl transferase family, helical bundle domain JCM16456_RS02995 PF01676 Metalloenzyme superfamily JCM16456_RS03000 PF01048 Phosphorylase superfamily JCM16456_RS03010 PF18429 Domain of unknown function (DUF5609) JCM16456_RS03020 PF18073 Rubredoxin metal binding domain JCM16456_RS03025 PF03144 Elongation factor Tu domain 2 JCM16456_RS03025 PF00009 Elongation factor Tu GTP binding domain JCM16456_RS03025 PF03764 Elongation factor G, domain IV JCM16456_RS03025 PF00679 Elongation factor G C-terminus JCM16456_RS03025 PF14492 Elongation Factor G, domain II JCM16456_RS03030 PF00501 AMP-binding enzyme JCM16456_RS03035 PF01966 HD domain JCM16456_RS03040 PF01263 Aldose 1-epimerase JCM16456_RS03050 PF01544 CorA-like Mg2+ transporter protein JCM16456_RS03055 PF02080 TrkA-C domain JCM16456_RS03055 PF18030 RimK PreATP-grasp domain JCM16456_RS03055 PF08443 RimK-like ATP-grasp domain JCM16456_RS03065 PF01717 Cobalamin-independent synthase, Catalytic domain JCM16456_RS03070 PF00962 Adenosine/AMP deaminase JCM16456_RS03075 PF14602 Hexapeptide repeat of succinyl-transferase JCM16456_RS03075 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle JCM16456_RS03080 PF07130 YebG protein JCM16456_RS03090 PF17946 RecC C-terminal domain JCM16456_RS03095 PF13361 UvrD-like helicase C-terminal domain JCM16456_RS03095 PF00580 UvrD/REP helicase N-terminal domain JCM16456_RS03095 PF12705 PD-(D/E)XK nuclease superfamily JCM16456_RS03100 PF13538 UvrD-like helicase C-terminal domain JCM16456_RS03110 PF00583 Acetyltransferase (GNAT) family JCM16456_RS03110 PF00696 Amino acid kinase family JCM16456_RS03120 PF06725 3D domain JCM16456_RS03120 PF03562 MltA specific insert domain JCM16456_RS03125 PF00899 ThiF family JCM16456_RS03130 PF02657 Fe-S metabolism associated domain JCM16456_RS03135 PF00266 Aminotransferase class-V JCM16456_RS03140 PF01965 DJ-1/PfpI family JCM16456_RS03145 PF08546 Ketopantoate reductase PanE/ApbA C terminal JCM16456_RS03145 PF02558 Ketopantoate reductase PanE/ApbA JCM16456_RS03150 PF03502 Nucleoside-specific channel-forming protein, Tsx JCM16456_RS03160 PF04545 Sigma-70, region 4 JCM16456_RS03160 PF04542 Sigma-70 region 2 JCM16456_RS03170 PF07690 Major Facilitator Superfamily JCM16456_RS03175 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JCM16456_RS03185 PF05175 Methyltransferase small domain JCM16456_RS03190 PF01722 BolA-like protein JCM16456_RS03195 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) JCM16456_RS03195 PF11973 NQRA C-terminal domain JCM16456_RS03200 PF03116 NQR2, RnfD, RnfE family JCM16456_RS03205 PF04205 FMN-binding domain JCM16456_RS03210 PF02508 Rnf-Nqr subunit, membrane protein JCM16456_RS03215 PF02508 Rnf-Nqr subunit, membrane protein JCM16456_RS03220 PF00970 Oxidoreductase FAD-binding domain JCM16456_RS03220 PF00111 2Fe-2S iron-sulfur cluster binding domain JCM16456_RS03220 PF00175 Oxidoreductase NAD-binding domain JCM16456_RS03225 PF02424 ApbE family JCM16456_RS03235 PF00072 Response regulator receiver domain JCM16456_RS03235 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS03240 PF11799 impB/mucB/samB family C-terminal domain JCM16456_RS03240 PF11798 IMS family HHH motif JCM16456_RS03240 PF00817 impB/mucB/samB family JCM16456_RS03250 PF00209 Sodium:neurotransmitter symporter family JCM16456_RS03260 PF18030 RimK PreATP-grasp domain JCM16456_RS03260 PF08443 RimK-like ATP-grasp domain JCM16456_RS03265 PF08443 RimK-like ATP-grasp domain JCM16456_RS03265 PF18030 RimK PreATP-grasp domain JCM16456_RS03270 PF01546 Peptidase family M20/M25/M40 JCM16456_RS03270 PF07687 Peptidase dimerisation domain JCM16456_RS03280 PF00202 Aminotransferase class-III JCM16456_RS03285 PF00860 Permease family JCM16456_RS03290 PF00156 Phosphoribosyl transferase domain JCM16456_RS03295 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) JCM16456_RS03300 PF07417 Sigma factor-binding transcriptional regulator Crl JCM16456_RS03305 PF01472 PUA domain JCM16456_RS03305 PF00696 Amino acid kinase family JCM16456_RS03310 PF00171 Aldehyde dehydrogenase family JCM16456_RS03315 PF03477 ATP cone domain JCM16456_RS03320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JCM16456_RS03320 PF01872 RibD C-terminal domain JCM16456_RS03325 PF00677 Lumazine binding domain JCM16456_RS03330 PF00925 GTP cyclohydrolase II JCM16456_RS03330 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JCM16456_RS03335 PF00885 6,7-dimethyl-8-ribityllumazine synthase JCM16456_RS03340 PF01029 NusB family JCM16456_RS03345 PF02769 AIR synthase related protein, C-terminal domain JCM16456_RS03345 PF00586 AIR synthase related protein, N-terminal domain JCM16456_RS03350 PF04608 Phosphatidylglycerophosphatase A JCM16456_RS03355 PF11944 Protein of unknown function (DUF3461) JCM16456_RS03360 PF01909 Nucleotidyltransferase domain JCM16456_RS03360 PF08335 GlnD PII-uridylyltransferase JCM16456_RS03360 PF01966 HD domain JCM16456_RS03365 PF00557 Metallopeptidase family M24 JCM16456_RS03370 PF00318 Ribosomal protein S2 JCM16456_RS03375 PF00889 Elongation factor TS JCM16456_RS03380 PF00696 Amino acid kinase family JCM16456_RS03385 PF01765 Ribosome recycling factor JCM16456_RS03390 PF01255 Putative undecaprenyl diphosphate synthase JCM16456_RS03400 PF13288 DXP reductoisomerase C-terminal domain JCM16456_RS03400 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JCM16456_RS03400 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JCM16456_RS03405 PF02163 Peptidase family M50 JCM16456_RS03405 PF17820 PDZ domain JCM16456_RS03410 PF01103 Surface antigen JCM16456_RS03410 PF07244 Surface antigen variable number repeat JCM16456_RS03415 PF03938 Outer membrane protein (OmpH-like) JCM16456_RS03420 PF00132 Bacterial transferase hexapeptide (six repeats) JCM16456_RS03420 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JCM16456_RS03425 PF07977 FabA-like domain JCM16456_RS03430 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JCM16456_RS03430 PF00132 Bacterial transferase hexapeptide (six repeats) JCM16456_RS03435 PF02684 Lipid-A-disaccharide synthetase JCM16456_RS03440 PF01351 Ribonuclease HII JCM16456_RS03445 PF02811 PHP domain JCM16456_RS03445 PF14579 Helix-hairpin-helix motif JCM16456_RS03445 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCM16456_RS03445 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCM16456_RS03445 PF01336 OB-fold nucleic acid binding domain JCM16456_RS03450 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JCM16456_RS03455 PF09179 TilS substrate binding domain JCM16456_RS03455 PF01171 PP-loop family JCM16456_RS03455 PF11734 TilS substrate C-terminal domain JCM16456_RS03460 PF00034 Cytochrome c JCM16456_RS03465 PF00543 Nitrogen regulatory protein P-II JCM16456_RS03470 PF03372 Endonuclease/Exonuclease/phosphatase family JCM16456_RS03475 PF01464 Transglycosylase SLT domain JCM16456_RS03475 PF01476 LysM domain JCM16456_RS03480 PF00753 Metallo-beta-lactamase superfamily JCM16456_RS03480 PF16123 Hydroxyacylglutathione hydrolase C-terminus JCM16456_RS03485 PF08241 Methyltransferase domain JCM16456_RS03490 PF00075 RNase H JCM16456_RS03495 PF00929 Exonuclease JCM16456_RS03505 PF13580 SIS domain JCM16456_RS03510 PF13230 Glutamine amidotransferases class-II JCM16456_RS03515 PF00551 Formyl transferase JCM16456_RS03520 PF00586 AIR synthase related protein, N-terminal domain JCM16456_RS03520 PF02769 AIR synthase related protein, C-terminal domain JCM16456_RS03530 PF01479 S4 domain JCM16456_RS03530 PF00849 RNA pseudouridylate synthase JCM16456_RS03535 PF01713 Smr domain JCM16456_RS03545 PF01963 TraB family JCM16456_RS03550 PF00403 Heavy-metal-associated domain JCM16456_RS03555 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCM16456_RS03565 PF00356 Bacterial regulatory proteins, lacI family JCM16456_RS03575 PF00459 Inositol monophosphatase family JCM16456_RS03585 PF08402 TOBE domain JCM16456_RS03585 PF00005 ABC transporter JCM16456_RS03620 PF04316 Anti-sigma-28 factor, FlgM JCM16456_RS03630 PF00072 Response regulator receiver domain JCM16456_RS03630 PF01584 CheW-like domain JCM16456_RS03635 PF03705 CheR methyltransferase, all-alpha domain JCM16456_RS03635 PF01739 CheR methyltransferase, SAM binding domain JCM16456_RS03640 PF00460 Flagella basal body rod protein JCM16456_RS03645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JCM16456_RS03645 PF00460 Flagella basal body rod protein JCM16456_RS03650 PF13861 FlgD Tudor-like domain JCM16456_RS03650 PF13860 FlgD Ig-like domain JCM16456_RS03650 PF03963 Flagellar hook capping protein - N-terminal region JCM16456_RS03655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JCM16456_RS03655 PF00460 Flagella basal body rod protein JCM16456_RS03655 PF07559 Flagellar basal body protein FlaE JCM16456_RS03660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JCM16456_RS03660 PF00460 Flagella basal body rod protein JCM16456_RS03665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JCM16456_RS03665 PF00460 Flagella basal body rod protein JCM16456_RS03670 PF02107 Flagellar L-ring protein JCM16456_RS03675 PF02119 Flagellar P-ring protein JCM16456_RS03680 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCM16456_RS03680 PF10135 Rod binding protein JCM16456_RS03685 PF07196 Flagellin hook IN motif JCM16456_RS03685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JCM16456_RS03690 PF00669 Bacterial flagellin N-terminal helical region JCM16456_RS03695 PF00669 Bacterial flagellin N-terminal helical region JCM16456_RS03695 PF00700 Bacterial flagellin C-terminal helical region JCM16456_RS03695 PF07196 Flagellin hook IN motif JCM16456_RS03700 PF00700 Bacterial flagellin C-terminal helical region JCM16456_RS03700 PF07196 Flagellin hook IN motif JCM16456_RS03700 PF00669 Bacterial flagellin N-terminal helical region JCM16456_RS03790 PF06071 Protein of unknown function (DUF933) JCM16456_RS03790 PF01926 50S ribosome-binding GTPase JCM16456_RS03795 PF01195 Peptidyl-tRNA hydrolase JCM16456_RS03800 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JCM16456_RS03800 PF14572 Phosphoribosyl synthetase-associated domain JCM16456_RS03805 PF08544 GHMP kinases C terminal JCM16456_RS03805 PF00288 GHMP kinases N terminal domain JCM16456_RS03810 PF03550 Outer membrane lipoprotein LolB JCM16456_RS03815 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JCM16456_RS03815 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JCM16456_RS03815 PF01488 Shikimate / quinate 5-dehydrogenase JCM16456_RS03820 PF00472 RF-1 domain JCM16456_RS03820 PF03462 PCRF domain JCM16456_RS03825 PF13847 Methyltransferase domain JCM16456_RS03825 PF17827 PrmC N-terminal domain JCM16456_RS03830 PF04247 Invasion gene expression up-regulator, SirB JCM16456_RS03835 PF13369 Transglutaminase-like superfamily JCM16456_RS03840 PF00793 DAHP synthetase I family JCM16456_RS03845 PF00149 Calcineurin-like phosphoesterase JCM16456_RS03845 PF02872 5'-nucleotidase, C-terminal domain JCM16456_RS03850 PF04073 Aminoacyl-tRNA editing domain JCM16456_RS03855 PF00860 Permease family JCM16456_RS03865 PF03358 NADPH-dependent FMN reductase JCM16456_RS03870 PF03960 ArsC family JCM16456_RS03875 PF01435 Peptidase family M48 JCM16456_RS03875 PF13181 Tetratricopeptide repeat JCM16456_RS03880 PF01594 AI-2E family transporter JCM16456_RS03885 PF02743 Cache domain JCM16456_RS03885 PF00672 HAMP domain JCM16456_RS03885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS03890 PF00578 AhpC/TSA family JCM16456_RS03900 PF00701 Dihydrodipicolinate synthetase family JCM16456_RS03905 PF06804 NlpB/DapX lipoprotein JCM16456_RS03915 PF02557 D-alanyl-D-alanine carboxypeptidase JCM16456_RS03920 PF07687 Peptidase dimerisation domain JCM16456_RS03920 PF01546 Peptidase family M20/M25/M40 JCM16456_RS03925 PF03960 ArsC family JCM16456_RS03945 PF04261 Dyp-type peroxidase family JCM16456_RS03950 PF07196 Flagellin hook IN motif JCM16456_RS03950 PF00669 Bacterial flagellin N-terminal helical region JCM16456_RS03950 PF00700 Bacterial flagellin C-terminal helical region JCM16456_RS03955 PF00700 Bacterial flagellin C-terminal helical region JCM16456_RS03955 PF00669 Bacterial flagellin N-terminal helical region JCM16456_RS03955 PF07196 Flagellin hook IN motif JCM16456_RS03960 PF07196 Flagellin hook IN motif JCM16456_RS03960 PF00669 Bacterial flagellin N-terminal helical region JCM16456_RS03960 PF00700 Bacterial flagellin C-terminal helical region JCM16456_RS03965 PF00669 Bacterial flagellin N-terminal helical region JCM16456_RS03965 PF00700 Bacterial flagellin C-terminal helical region JCM16456_RS03965 PF07196 Flagellin hook IN motif JCM16456_RS03970 PF03646 FlaG protein JCM16456_RS03975 PF02465 Flagellar hook-associated protein 2 N-terminus JCM16456_RS03975 PF07195 Flagellar hook-associated protein 2 C-terminus JCM16456_RS03975 PF07196 Flagellin hook IN motif JCM16456_RS03985 PF02561 Flagellar protein FliS JCM16456_RS03990 PF02954 Bacterial regulatory protein, Fis family JCM16456_RS03990 PF06490 Flagellar regulatory protein FleQ JCM16456_RS03990 PF00158 Sigma-54 interaction domain JCM16456_RS03995 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS03995 PF13188 PAS domain JCM16456_RS03995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS04000 PF00158 Sigma-54 interaction domain JCM16456_RS04000 PF02954 Bacterial regulatory protein, Fis family JCM16456_RS04000 PF00072 Response regulator receiver domain JCM16456_RS04005 PF02049 Flagellar hook-basal body complex protein FliE JCM16456_RS04010 PF01514 Secretory protein of YscJ/FliF family JCM16456_RS04010 PF08345 Flagellar M-ring protein C-terminal JCM16456_RS04015 PF14841 FliG middle domain JCM16456_RS04015 PF14842 FliG N-terminal domain JCM16456_RS04015 PF01706 FliG C-terminal domain JCM16456_RS04025 PF18269 T3SS EscN ATPase C-terminal domain JCM16456_RS04025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCM16456_RS04045 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JCM16456_RS04045 PF02154 Flagellar motor switch protein FliM JCM16456_RS04050 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JCM16456_RS04055 PF04347 Flagellar biosynthesis protein, FliO JCM16456_RS04060 PF00813 FliP family JCM16456_RS04065 PF01313 Bacterial export proteins, family 3 JCM16456_RS04070 PF01311 Bacterial export proteins, family 1 JCM16456_RS04075 PF01312 FlhB HrpN YscU SpaS Family JCM16456_RS04080 PF01713 Smr domain JCM16456_RS04085 PF05175 Methyltransferase small domain JCM16456_RS04090 PF01264 Chorismate synthase JCM16456_RS04095 PF04315 Elongation factor P hydroxylase JCM16456_RS04100 PF08891 YfcL protein JCM16456_RS04110 PF16868 NMT1-like family JCM16456_RS04120 PF01266 FAD dependent oxidoreductase JCM16456_RS04120 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JCM16456_RS04125 PF00109 Beta-ketoacyl synthase, N-terminal domain JCM16456_RS04125 PF02801 Beta-ketoacyl synthase, C-terminal domain JCM16456_RS04130 PF11890 Domain of unknown function (DUF3410) JCM16456_RS04130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCM16456_RS04130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCM16456_RS04135 PF01118 Semialdehyde dehydrogenase, NAD binding domain JCM16456_RS04135 PF02774 Semialdehyde dehydrogenase, dimerisation domain JCM16456_RS04140 PF01475 Ferric uptake regulator family JCM16456_RS04145 PF03466 LysR substrate binding domain JCM16456_RS04145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS04150 PF03788 LrgA family JCM16456_RS04155 PF04172 LrgB-like family JCM16456_RS04160 PF00258 Flavodoxin JCM16456_RS04165 PF12697 Alpha/beta hydrolase family JCM16456_RS04170 PF03925 SeqA protein C-terminal domain JCM16456_RS04170 PF17206 SeqA protein N-terminal domain JCM16456_RS04175 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCM16456_RS04175 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCM16456_RS04175 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCM16456_RS04175 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCM16456_RS04185 PF01784 NIF3 (NGG1p interacting factor 3) JCM16456_RS04190 PF00285 Citrate synthase, C-terminal domain JCM16456_RS04195 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JCM16456_RS04200 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JCM16456_RS04205 PF02910 Fumarate reductase flavoprotein C-term JCM16456_RS04205 PF00890 FAD binding domain JCM16456_RS04210 PF13085 2Fe-2S iron-sulfur cluster binding domain JCM16456_RS04215 PF02779 Transketolase, pyrimidine binding domain JCM16456_RS04215 PF16870 2-oxoglutarate dehydrogenase C-terminal JCM16456_RS04215 PF00676 Dehydrogenase E1 component JCM16456_RS04215 PF16078 2-oxoglutarate dehydrogenase N-terminus JCM16456_RS04220 PF00364 Biotin-requiring enzyme JCM16456_RS04220 PF02817 e3 binding domain JCM16456_RS04220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCM16456_RS04225 PF00549 CoA-ligase JCM16456_RS04225 PF08442 ATP-grasp domain JCM16456_RS04230 PF02629 CoA binding domain JCM16456_RS04230 PF00549 CoA-ligase JCM16456_RS04235 PF00950 ABC 3 transport family JCM16456_RS04240 PF00005 ABC transporter JCM16456_RS04245 PF01297 Zinc-uptake complex component A periplasmic JCM16456_RS04250 PF04023 FeoA domain JCM16456_RS04255 PF02421 Ferrous iron transport protein B JCM16456_RS04255 PF07670 Nucleoside recognition JCM16456_RS04255 PF07664 Ferrous iron transport protein B C terminus JCM16456_RS04270 PF00750 tRNA synthetases class I (R) JCM16456_RS04270 PF03485 Arginyl tRNA synthetase N terminal domain JCM16456_RS04270 PF05746 DALR anticodon binding domain JCM16456_RS04275 PF06185 YecM protein JCM16456_RS04280 PF00675 Insulinase (Peptidase family M16) JCM16456_RS04280 PF05193 Peptidase M16 inactive domain JCM16456_RS04280 PF16187 Middle or third domain of peptidase_M16 JCM16456_RS04285 PF00300 Histidine phosphatase superfamily (branch 1) JCM16456_RS04290 PF00771 FHIPEP family JCM16456_RS04295 PF00448 SRP54-type protein, GTPase domain JCM16456_RS04300 PF10609 NUBPL iron-transfer P-loop NTPase JCM16456_RS04305 PF04545 Sigma-70, region 4 JCM16456_RS04305 PF04539 Sigma-70 region 3 JCM16456_RS04305 PF04542 Sigma-70 region 2 JCM16456_RS04310 PF00072 Response regulator receiver domain JCM16456_RS04315 PF04344 Chemotaxis phosphatase, CheZ JCM16456_RS04320 PF00072 Response regulator receiver domain JCM16456_RS04320 PF01627 Hpt domain JCM16456_RS04320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS04320 PF02895 Signal transducing histidine kinase, homodimeric domain JCM16456_RS04320 PF01584 CheW-like domain JCM16456_RS04325 PF01339 CheB methylesterase JCM16456_RS04325 PF00072 Response regulator receiver domain JCM16456_RS04330 PF13614 AAA domain JCM16456_RS04340 PF01584 CheW-like domain JCM16456_RS04350 PF00005 ABC transporter JCM16456_RS04355 PF03379 CcmB protein JCM16456_RS04360 PF01578 Cytochrome C assembly protein JCM16456_RS04370 PF03100 CcmE JCM16456_RS04375 PF01578 Cytochrome C assembly protein JCM16456_RS04375 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JCM16456_RS04380 PF08534 Redoxin JCM16456_RS04385 PF03918 Cytochrome C biogenesis protein JCM16456_RS04390 PF03918 Cytochrome C biogenesis protein JCM16456_RS04395 PF04333 MlaA lipoprotein JCM16456_RS04410 PF01063 Amino-transferase class IV JCM16456_RS04415 PF07274 Protein of unknown function (DUF1440) JCM16456_RS04420 PF13673 Acetyltransferase (GNAT) domain JCM16456_RS04425 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JCM16456_RS04425 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JCM16456_RS04430 PF00462 Glutaredoxin JCM16456_RS04435 PF01131 DNA topoisomerase JCM16456_RS04435 PF01751 Toprim domain JCM16456_RS04440 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS04440 PF17151 Periplasmic sensor domain JCM16456_RS04450 PF03466 LysR substrate binding domain JCM16456_RS04450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS04455 PF07690 Major Facilitator Superfamily JCM16456_RS04465 PF02378 Phosphotransferase system, EIIC JCM16456_RS04465 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCM16456_RS04465 PF00367 phosphotransferase system, EIIB JCM16456_RS04470 PF00232 Glycosyl hydrolase family 1 JCM16456_RS04475 PF03123 CAT RNA binding domain JCM16456_RS04475 PF00874 PRD domain JCM16456_RS04485 PF00196 Bacterial regulatory proteins, luxR family JCM16456_RS04485 PF00072 Response regulator receiver domain JCM16456_RS04490 PF07730 Histidine kinase JCM16456_RS04490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS04490 PF00672 HAMP domain JCM16456_RS04495 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JCM16456_RS04515 PF00672 HAMP domain JCM16456_RS04515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS04515 PF12729 Four helix bundle sensory module for signal transduction JCM16456_RS04525 PF00884 Sulfatase JCM16456_RS04525 PF11893 Domain of unknown function (DUF3413) JCM16456_RS04530 PF07208 Protein of unknown function (DUF1414) JCM16456_RS04535 PF04245 37-kD nucleoid-associated bacterial protein JCM16456_RS04540 PF03553 Na+/H+ antiporter family JCM16456_RS04545 PF02774 Semialdehyde dehydrogenase, dimerisation domain JCM16456_RS04545 PF01118 Semialdehyde dehydrogenase, NAD binding domain JCM16456_RS04550 PF01914 MarC family integral membrane protein JCM16456_RS04555 PF00465 Iron-containing alcohol dehydrogenase JCM16456_RS04555 PF00171 Aldehyde dehydrogenase family JCM16456_RS04560 PF01740 STAS domain JCM16456_RS04560 PF00916 Sulfate permease family JCM16456_RS04565 PF10150 Ribonuclease E/G family JCM16456_RS04565 PF12111 Polyribonucleotide phosphorylase C terminal JCM16456_RS04565 PF00575 S1 RNA binding domain JCM16456_RS04570 PF12111 Polyribonucleotide phosphorylase C terminal JCM16456_RS04570 PF10150 Ribonuclease E/G family JCM16456_RS04570 PF00575 S1 RNA binding domain JCM16456_RS04575 PF01479 S4 domain JCM16456_RS04575 PF00849 RNA pseudouridylate synthase JCM16456_RS04580 PF02545 Maf-like protein JCM16456_RS04585 PF02620 Large ribosomal RNA subunit accumulation protein YceD JCM16456_RS04590 PF01783 Ribosomal L32p protein family JCM16456_RS04595 PF02504 Fatty acid synthesis protein JCM16456_RS04600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JCM16456_RS04600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JCM16456_RS04605 PF00698 Acyl transferase domain JCM16456_RS04615 PF00550 Phosphopantetheine attachment site JCM16456_RS04620 PF00109 Beta-ketoacyl synthase, N-terminal domain JCM16456_RS04620 PF02801 Beta-ketoacyl synthase, C-terminal domain JCM16456_RS04625 PF01063 Amino-transferase class IV JCM16456_RS04630 PF02618 YceG-like family JCM16456_RS04635 PF02223 Thymidylate kinase JCM16456_RS04640 PF09115 DNA polymerase III, delta subunit, C terminal JCM16456_RS04645 PF01026 TatD related DNase JCM16456_RS04650 PF00367 phosphotransferase system, EIIB JCM16456_RS04650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCM16456_RS04650 PF02378 Phosphotransferase system, EIIC JCM16456_RS04665 PF00209 Sodium:neurotransmitter symporter family JCM16456_RS04670 PF01734 Patatin-like phospholipase JCM16456_RS04675 PF02887 Pyruvate kinase, alpha/beta domain JCM16456_RS04675 PF00224 Pyruvate kinase, barrel domain JCM16456_RS04680 PF00480 ROK family JCM16456_RS04685 PF00072 Response regulator receiver domain JCM16456_RS04685 PF01584 CheW-like domain JCM16456_RS04690 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCM16456_RS04690 PF14579 Helix-hairpin-helix motif JCM16456_RS04690 PF02811 PHP domain JCM16456_RS04690 PF01336 OB-fold nucleic acid binding domain JCM16456_RS04690 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCM16456_RS04705 PF02798 Glutathione S-transferase, N-terminal domain JCM16456_RS04705 PF00043 Glutathione S-transferase, C-terminal domain JCM16456_RS04710 PF00106 short chain dehydrogenase JCM16456_RS04715 PF01343 Peptidase family S49 JCM16456_RS04715 PF08496 Peptidase family S49 N-terminal JCM16456_RS04725 PF11806 Domain of unknown function (DUF3327) JCM16456_RS04725 PF00756 Putative esterase JCM16456_RS04740 PF13286 Phosphohydrolase-associated domain JCM16456_RS04740 PF01966 HD domain JCM16456_RS04750 PF00155 Aminotransferase class I and II JCM16456_RS04755 PF00425 chorismate binding enzyme JCM16456_RS04760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCM16456_RS04760 PF16582 Middle domain of thiamine pyrophosphate JCM16456_RS04760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCM16456_RS04765 PF12697 Alpha/beta hydrolase family JCM16456_RS04770 PF00378 Enoyl-CoA hydratase/isomerase JCM16456_RS04775 PF13378 Enolase C-terminal domain-like JCM16456_RS04780 PF00501 AMP-binding enzyme JCM16456_RS04780 PF13193 AMP-binding enzyme C-terminal domain JCM16456_RS04785 PF03601 Conserved hypothetical protein 698 JCM16456_RS04790 PF07690 Major Facilitator Superfamily JCM16456_RS04805 PF00999 Sodium/hydrogen exchanger family JCM16456_RS04815 PF13404 AsnC-type helix-turn-helix domain JCM16456_RS04815 PF01037 Lrp/AsnC ligand binding domain JCM16456_RS04820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS04820 PF00672 HAMP domain JCM16456_RS04825 PF00672 HAMP domain JCM16456_RS04825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS04835 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JCM16456_RS04845 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS04845 PF00563 EAL domain JCM16456_RS04860 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JCM16456_RS04865 PF02463 RecF/RecN/SMC N terminal domain JCM16456_RS04930 PF03050 Transposase IS66 family JCM16456_RS04930 PF13007 Transposase C of IS166 homeodomain JCM16456_RS04930 PF13005 zinc-finger binding domain of transposase IS66 JCM16456_RS04930 PF13817 IS66 C-terminal element JCM16456_RS04935 PF01548 Transposase JCM16456_RS04935 PF02371 Transposase IS116/IS110/IS902 family JCM16456_RS04950 PF01844 HNH endonuclease JCM16456_RS04955 PF00270 DEAD/DEAH box helicase JCM16456_RS04955 PF00271 Helicase conserved C-terminal domain JCM16456_RS04960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS04960 PF08447 PAS fold JCM16456_RS04960 PF13426 PAS domain JCM16456_RS04965 PF03412 Peptidase C39 family JCM16456_RS04965 PF00005 ABC transporter JCM16456_RS04965 PF00664 ABC transporter transmembrane region JCM16456_RS04990 PF02321 Outer membrane efflux protein JCM16456_RS05000 PF00072 Response regulator receiver domain JCM16456_RS05000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS05010 PF00360 Phytochrome region JCM16456_RS05010 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS05010 PF01590 GAF domain JCM16456_RS05010 PF00563 EAL domain JCM16456_RS05015 PF03466 LysR substrate binding domain JCM16456_RS05015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS05020 PF01810 LysE type translocator JCM16456_RS05025 PF00248 Aldo/keto reductase family JCM16456_RS05030 PF00248 Aldo/keto reductase family JCM16456_RS05040 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS05040 PF08521 Two-component sensor kinase N-terminal JCM16456_RS05040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS05045 PF00486 Transcriptional regulatory protein, C terminal JCM16456_RS05045 PF00072 Response regulator receiver domain JCM16456_RS05050 PF00884 Sulfatase JCM16456_RS05050 PF08019 Phosphoethanolamine transferase EptA/EptB JCM16456_RS05070 PF02028 BCCT, betaine/carnitine/choline family transporter JCM16456_RS05075 PF00563 EAL domain JCM16456_RS05075 PF00196 Bacterial regulatory proteins, luxR family JCM16456_RS05080 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS05080 PF00672 HAMP domain JCM16456_RS05080 PF01627 Hpt domain JCM16456_RS05080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS05080 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JCM16456_RS05080 PF00072 Response regulator receiver domain JCM16456_RS05085 PF01590 GAF domain JCM16456_RS05085 PF00563 EAL domain JCM16456_RS05085 PF00360 Phytochrome region JCM16456_RS05085 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS05105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCM16456_RS05110 PF06039 Malate:quinone oxidoreductase (Mqo) JCM16456_RS05120 PF00544 Pectate lyase JCM16456_RS05125 PF00072 Response regulator receiver domain JCM16456_RS05125 PF13188 PAS domain JCM16456_RS05125 PF08448 PAS fold JCM16456_RS05125 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS05125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS05130 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS05130 PF08448 PAS fold JCM16456_RS05130 PF13188 PAS domain JCM16456_RS05130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS05130 PF00072 Response regulator receiver domain JCM16456_RS05135 PF03466 LysR substrate binding domain JCM16456_RS05135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS05145 PF00578 AhpC/TSA family JCM16456_RS05160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS05160 PF03466 LysR substrate binding domain JCM16456_RS05165 PF03306 Alpha-acetolactate decarboxylase JCM16456_RS05170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCM16456_RS05170 PF00205 Thiamine pyrophosphate enzyme, central domain JCM16456_RS05170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCM16456_RS05195 PF03466 LysR substrate binding domain JCM16456_RS05195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS05200 PF00698 Acyl transferase domain JCM16456_RS05205 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG JCM16456_RS05220 PF01039 Carboxyl transferase domain JCM16456_RS05225 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JCM16456_RS05230 PF16957 Malonate decarboxylase, alpha subunit, transporter JCM16456_RS05240 PF03466 LysR substrate binding domain JCM16456_RS05240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS05265 PF00356 Bacterial regulatory proteins, lacI family JCM16456_RS05265 PF13407 Periplasmic binding protein domain JCM16456_RS05280 PF07687 Peptidase dimerisation domain JCM16456_RS05280 PF01546 Peptidase family M20/M25/M40 JCM16456_RS05285 PF13505 Outer membrane protein beta-barrel domain JCM16456_RS05290 PF00912 Transglycosylase JCM16456_RS05295 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ JCM16456_RS05305 PF01810 LysE type translocator JCM16456_RS05310 PF03239 Iron permease FTR1 family JCM16456_RS05315 PF10634 Fe2+ transport protein JCM16456_RS05325 PF12704 MacB-like periplasmic core domain JCM16456_RS05325 PF02687 FtsX-like permease family JCM16456_RS05335 PF02687 FtsX-like permease family JCM16456_RS05335 PF00005 ABC transporter JCM16456_RS05335 PF12704 MacB-like periplasmic core domain JCM16456_RS05350 PF04205 FMN-binding domain JCM16456_RS05360 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JCM16456_RS05365 PF02441 Flavoprotein JCM16456_RS05370 PF01047 MarR family JCM16456_RS05390 PF18113 Rubredoxin binding C-terminal domain JCM16456_RS05390 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCM16456_RS05395 PF00258 Flavodoxin JCM16456_RS05395 PF00301 Rubredoxin JCM16456_RS05395 PF00753 Metallo-beta-lactamase superfamily JCM16456_RS05400 PF00158 Sigma-54 interaction domain JCM16456_RS05400 PF01590 GAF domain JCM16456_RS05405 PF00933 Glycosyl hydrolase family 3 N terminal domain JCM16456_RS05405 PF01915 Glycosyl hydrolase family 3 C-terminal domain JCM16456_RS05405 PF14310 Fibronectin type III-like domain JCM16456_RS05410 PF01915 Glycosyl hydrolase family 3 C-terminal domain JCM16456_RS05410 PF00933 Glycosyl hydrolase family 3 N terminal domain JCM16456_RS05410 PF14310 Fibronectin type III-like domain JCM16456_RS05415 PF14310 Fibronectin type III-like domain JCM16456_RS05415 PF00933 Glycosyl hydrolase family 3 N terminal domain JCM16456_RS05415 PF01915 Glycosyl hydrolase family 3 C-terminal domain JCM16456_RS05420 PF01566 Natural resistance-associated macrophage protein JCM16456_RS05425 PF01325 Iron dependent repressor, N-terminal DNA binding domain JCM16456_RS05425 PF02742 Iron dependent repressor, metal binding and dimerisation domain JCM16456_RS05435 PF16353 Domain of unknown function(DUF4981) JCM16456_RS05435 PF02837 Glycosyl hydrolases family 2, sugar binding domain JCM16456_RS05435 PF02929 Beta galactosidase small chain JCM16456_RS05435 PF00703 Glycosyl hydrolases family 2 JCM16456_RS05435 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JCM16456_RS05440 PF16874 Glycosyl hydrolase family 36 C-terminal domain JCM16456_RS05440 PF16875 Glycosyl hydrolase family 36 N-terminal domain JCM16456_RS05445 PF18027 Cytosolic carboxypeptidase N-terminal domain JCM16456_RS05445 PF00246 Zinc carboxypeptidase JCM16456_RS05450 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS05450 PF08448 PAS fold JCM16456_RS05455 PF00248 Aldo/keto reductase family JCM16456_RS05460 PF00005 ABC transporter JCM16456_RS05465 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS05470 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS05475 PF12849 PBP superfamily domain JCM16456_RS05490 PF01618 MotA/TolQ/ExbB proton channel family JCM16456_RS05510 PF01261 Xylose isomerase-like TIM barrel JCM16456_RS05515 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JCM16456_RS05525 PF00596 Class II Aldolase and Adducin N-terminal domain JCM16456_RS05530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCM16456_RS05535 PF03611 PTS system sugar-specific permease component JCM16456_RS05545 PF00455 DeoR C terminal sensor domain JCM16456_RS05545 PF08220 DeoR-like helix-turn-helix domain JCM16456_RS05555 PF12804 MobA-like NTP transferase domain JCM16456_RS05555 PF14602 Hexapeptide repeat of succinyl-transferase JCM16456_RS05555 PF00132 Bacterial transferase hexapeptide (six repeats) JCM16456_RS05565 PF01037 Lrp/AsnC ligand binding domain JCM16456_RS05575 PF00155 Aminotransferase class I and II JCM16456_RS05585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS05585 PF03466 LysR substrate binding domain JCM16456_RS05595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JCM16456_RS05600 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS05605 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS05605 PF12911 N-terminal TM domain of oligopeptide transport permease C JCM16456_RS05610 PF00005 ABC transporter JCM16456_RS05610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCM16456_RS05615 PF00005 ABC transporter JCM16456_RS05615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCM16456_RS05635 PF01497 Periplasmic binding protein JCM16456_RS05640 PF01032 FecCD transport family JCM16456_RS05645 PF00005 ABC transporter JCM16456_RS05650 PF07690 Major Facilitator Superfamily JCM16456_RS05655 PF00255 Glutathione peroxidase JCM16456_RS05660 PF07690 Major Facilitator Superfamily JCM16456_RS05665 PF00356 Bacterial regulatory proteins, lacI family JCM16456_RS05670 PF00232 Glycosyl hydrolase family 1 JCM16456_RS05675 PF17954 Quercetinase C-terminal cupin domain JCM16456_RS05675 PF02678 Pirin JCM16456_RS05680 PF02110 Hydroxyethylthiazole kinase family JCM16456_RS05685 PF08543 Phosphomethylpyrimidine kinase JCM16456_RS05695 PF02321 Outer membrane efflux protein JCM16456_RS05700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCM16456_RS05700 PF00529 HlyD membrane-fusion protein of T1SS JCM16456_RS05705 PF07690 Major Facilitator Superfamily JCM16456_RS05725 PF07670 Nucleoside recognition JCM16456_RS05725 PF07662 Na+ dependent nucleoside transporter C-terminus JCM16456_RS05725 PF01773 Na+ dependent nucleoside transporter N-terminus JCM16456_RS05735 PF02470 MlaD protein JCM16456_RS05740 PF04403 Paraquat-inducible protein A JCM16456_RS05750 PF00072 Response regulator receiver domain JCM16456_RS05750 PF00486 Transcriptional regulatory protein, C terminal JCM16456_RS05755 PF00672 HAMP domain JCM16456_RS05755 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS05755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS05760 PF00367 phosphotransferase system, EIIB JCM16456_RS05760 PF02378 Phosphotransferase system, EIIC JCM16456_RS05765 PF00356 Bacterial regulatory proteins, lacI family JCM16456_RS05770 PF00251 Glycosyl hydrolases family 32 N-terminal domain JCM16456_RS05770 PF08244 Glycosyl hydrolases family 32 C terminal JCM16456_RS05775 PF12706 Beta-lactamase superfamily domain JCM16456_RS05780 PF01965 DJ-1/PfpI family JCM16456_RS05785 PF02264 LamB porin JCM16456_RS05785 PF11471 Maltoporin periplasmic N-terminal extension JCM16456_RS05790 PF00294 pfkB family carbohydrate kinase JCM16456_RS05800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JCM16456_RS05805 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS05810 PF12911 N-terminal TM domain of oligopeptide transport permease C JCM16456_RS05810 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS05815 PF00005 ABC transporter JCM16456_RS05815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCM16456_RS05820 PF00005 ABC transporter JCM16456_RS05820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCM16456_RS05825 PF13409 Glutathione S-transferase, N-terminal domain JCM16456_RS05830 PF07085 DRTGG domain JCM16456_RS05830 PF01515 Phosphate acetyl/butaryl transferase JCM16456_RS05835 PF00871 Acetokinase family JCM16456_RS05840 PF04217 Protein of unknown function, DUF412 JCM16456_RS05850 PF02653 Branched-chain amino acid transport system / permease component JCM16456_RS05855 PF00005 ABC transporter JCM16456_RS05860 PF01207 Dihydrouridine synthase (Dus) JCM16456_RS05865 PF07516 SecA Wing and Scaffold domain JCM16456_RS05865 PF02810 SEC-C motif JCM16456_RS05865 PF01043 SecA preprotein cross-linking domain JCM16456_RS05865 PF07517 SecA DEAD-like domain JCM16456_RS05870 PF03548 Outer membrane lipoprotein carrier protein LolA JCM16456_RS05875 PF00004 ATPase family associated with various cellular activities (AAA) JCM16456_RS05875 PF16193 AAA C-terminal domain JCM16456_RS05875 PF12002 MgsA AAA+ ATPase C terminal JCM16456_RS05880 PF02403 Seryl-tRNA synthetase N-terminal domain JCM16456_RS05880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCM16456_RS05885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JCM16456_RS05885 PF00384 Molybdopterin oxidoreductase JCM16456_RS05885 PF01568 Molydopterin dinucleotide binding domain JCM16456_RS05895 PF00202 Aminotransferase class-III JCM16456_RS05900 PF04055 Radical SAM superfamily JCM16456_RS05900 PF06968 Biotin and Thiamin Synthesis associated domain JCM16456_RS05905 PF00155 Aminotransferase class I and II JCM16456_RS05910 PF08241 Methyltransferase domain JCM16456_RS05925 PF01447 Thermolysin metallopeptidase, catalytic domain JCM16456_RS05925 PF02868 Thermolysin metallopeptidase, alpha-helical domain JCM16456_RS05925 PF04151 Bacterial pre-peptidase C-terminal domain JCM16456_RS05925 PF03413 Peptidase propeptide and YPEB domain JCM16456_RS05925 PF07504 Fungalysin/Thermolysin Propeptide Motif JCM16456_RS05930 PF01435 Peptidase family M48 JCM16456_RS05975 PF00206 Lyase JCM16456_RS05975 PF08328 Adenylosuccinate lyase C-terminal JCM16456_RS05980 PF04356 Protein of unknown function (DUF489) JCM16456_RS05990 PF00294 pfkB family carbohydrate kinase JCM16456_RS05995 PF00816 H-NS histone family JCM16456_RS06000 PF03553 Na+/H+ antiporter family JCM16456_RS06005 PF08029 HisG, C-terminal domain JCM16456_RS06005 PF01634 ATP phosphoribosyltransferase JCM16456_RS06010 PF00815 Histidinol dehydrogenase JCM16456_RS06015 PF00155 Aminotransferase class I and II JCM16456_RS06020 PF00475 Imidazoleglycerol-phosphate dehydratase JCM16456_RS06020 PF08645 Polynucleotide kinase 3 phosphatase JCM16456_RS06025 PF00117 Glutamine amidotransferase class-I JCM16456_RS06030 PF00977 Histidine biosynthesis protein JCM16456_RS06035 PF00977 Histidine biosynthesis protein JCM16456_RS06040 PF01502 Phosphoribosyl-AMP cyclohydrolase JCM16456_RS06040 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JCM16456_RS06045 PF00849 RNA pseudouridylate synthase JCM16456_RS06050 PF03971 Monomeric isocitrate dehydrogenase JCM16456_RS06055 PF00313 'Cold-shock' DNA-binding domain JCM16456_RS06060 PF02617 ATP-dependent Clp protease adaptor protein ClpS JCM16456_RS06065 PF10431 C-terminal, D2-small domain, of ClpB protein JCM16456_RS06065 PF17871 AAA lid domain JCM16456_RS06065 PF07724 AAA domain (Cdc48 subfamily) JCM16456_RS06065 PF00004 ATPase family associated with various cellular activities (AAA) JCM16456_RS06065 PF02861 Clp amino terminal domain, pathogenicity island component JCM16456_RS06070 PF01176 Translation initiation factor 1A / IF-1 JCM16456_RS06075 PF04377 Arginine-tRNA-protein transferase, C terminus JCM16456_RS06075 PF04376 Arginine-tRNA-protein transferase, N terminus JCM16456_RS06080 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JCM16456_RS06085 PF05433 Glycine zipper 2TM domain JCM16456_RS06090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCM16456_RS06095 PF10692 Protein of unknown function (DUF2498) JCM16456_RS06105 PF01396 Topoisomerase DNA binding C4 zinc finger JCM16456_RS06105 PF08272 Topoisomerase I zinc-ribbon-like JCM16456_RS06105 PF01751 Toprim domain JCM16456_RS06105 PF01131 DNA topoisomerase JCM16456_RS06110 PF00483 Nucleotidyl transferase JCM16456_RS06115 PF08323 Starch synthase catalytic domain JCM16456_RS06115 PF00534 Glycosyl transferases group 1 JCM16456_RS06125 PF04994 TfoX C-terminal domain JCM16456_RS06125 PF04993 TfoX N-terminal domain JCM16456_RS06130 PF00356 Bacterial regulatory proteins, lacI family JCM16456_RS06135 PF00486 Transcriptional regulatory protein, C terminal JCM16456_RS06135 PF00072 Response regulator receiver domain JCM16456_RS06140 PF02698 DUF218 domain JCM16456_RS06145 PF13847 Methyltransferase domain JCM16456_RS06150 PF17193 MukF C-terminal domain JCM16456_RS06150 PF03882 MukF winged-helix domain JCM16456_RS06150 PF17192 MukF middle domain JCM16456_RS06155 PF04288 MukE-like family JCM16456_RS06160 PF04310 MukB N-terminal JCM16456_RS06160 PF16330 MukB hinge domain JCM16456_RS06165 PF18030 RimK PreATP-grasp domain JCM16456_RS06165 PF08443 RimK-like ATP-grasp domain JCM16456_RS06175 PF08443 RimK-like ATP-grasp domain JCM16456_RS06175 PF18030 RimK PreATP-grasp domain JCM16456_RS06180 PF08003 Protein of unknown function (DUF1698) JCM16456_RS06185 PF13649 Methyltransferase domain JCM16456_RS06190 PF01904 Protein of unknown function DUF72 JCM16456_RS06195 PF02938 GAD domain JCM16456_RS06195 PF01336 OB-fold nucleic acid binding domain JCM16456_RS06195 PF00152 tRNA synthetases class II (D, K and N) JCM16456_RS06200 PF00265 Thymidine kinase JCM16456_RS06205 PF02698 DUF218 domain JCM16456_RS06225 PF01226 Formate/nitrite transporter JCM16456_RS06230 PF03649 Uncharacterised protein family (UPF0014) JCM16456_RS06240 PF00005 ABC transporter JCM16456_RS06245 PF00005 ABC transporter JCM16456_RS06245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCM16456_RS06250 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS06250 PF12911 N-terminal TM domain of oligopeptide transport permease C JCM16456_RS06255 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS06260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JCM16456_RS06265 PF00158 Sigma-54 interaction domain JCM16456_RS06265 PF02954 Bacterial regulatory protein, Fis family JCM16456_RS06270 PF04012 PspA/IM30 family JCM16456_RS06285 PF03352 Methyladenine glycosylase JCM16456_RS06290 PF01202 Shikimate kinase JCM16456_RS06295 PF05638 Type VI secretion system effector, Hcp JCM16456_RS06300 PF04717 Type VI secretion system, phage-baseplate injector JCM16456_RS06330 PF05593 RHS Repeat JCM16456_RS06330 PF03527 RHS protein JCM16456_RS06355 PF01053 Cys/Met metabolism PLP-dependent enzyme JCM16456_RS06360 PF13091 PLD-like domain JCM16456_RS06360 PF13396 Phospholipase_D-nuclease N-terminal JCM16456_RS06365 PF00209 Sodium:neurotransmitter symporter family JCM16456_RS06370 PF00849 RNA pseudouridylate synthase JCM16456_RS06375 PF17785 PUA-like domain JCM16456_RS06375 PF10672 S-adenosylmethionine-dependent methyltransferase JCM16456_RS06380 PF13416 Bacterial extracellular solute-binding protein JCM16456_RS06390 PF06945 Protein of unknown function (DUF1289) JCM16456_RS06400 PF03222 Tryptophan/tyrosine permease family JCM16456_RS06405 PF00270 DEAD/DEAH box helicase JCM16456_RS06405 PF00271 Helicase conserved C-terminal domain JCM16456_RS06410 PF03358 NADPH-dependent FMN reductase JCM16456_RS06415 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCM16456_RS06420 PF06134 L-rhamnose isomerase (RhaA) JCM16456_RS06425 PF06379 L-rhamnose-proton symport protein (RhaT) JCM16456_RS06430 PF05336 L-rhamnose mutarotase JCM16456_RS06435 PF00596 Class II Aldolase and Adducin N-terminal domain JCM16456_RS06440 PF12833 Helix-turn-helix domain JCM16456_RS06440 PF02311 AraC-like ligand binding domain JCM16456_RS06445 PF01699 Sodium/calcium exchanger protein JCM16456_RS06460 PF00313 'Cold-shock' DNA-binding domain JCM16456_RS06465 PF08753 NikR C terminal nickel binding domain JCM16456_RS06465 PF01402 Ribbon-helix-helix protein, copG family JCM16456_RS06470 PF00005 ABC transporter JCM16456_RS06475 PF00005 ABC transporter JCM16456_RS06480 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS06485 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS06490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JCM16456_RS06500 PF12833 Helix-turn-helix domain JCM16456_RS06500 PF02311 AraC-like ligand binding domain JCM16456_RS06505 PF00892 EamA-like transporter family JCM16456_RS06510 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS06510 PF17151 Periplasmic sensor domain JCM16456_RS06515 PF07196 Flagellin hook IN motif JCM16456_RS06515 PF00700 Bacterial flagellin C-terminal helical region JCM16456_RS06515 PF00669 Bacterial flagellin N-terminal helical region JCM16456_RS06520 PF02659 Putative manganese efflux pump JCM16456_RS06555 PF05816 Toxic anion resistance protein (TelA) JCM16456_RS06560 PF00501 AMP-binding enzyme JCM16456_RS06560 PF01553 Acyltransferase JCM16456_RS06565 PF01386 Ribosomal L25p family JCM16456_RS06570 PF00535 Glycosyl transferase family 2 JCM16456_RS06585 PF00665 Integrase core domain JCM16456_RS06590 PF01527 Transposase JCM16456_RS06610 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS06610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS06610 PF08521 Two-component sensor kinase N-terminal JCM16456_RS06615 PF00072 Response regulator receiver domain JCM16456_RS06615 PF00486 Transcriptional regulatory protein, C terminal JCM16456_RS06625 PF00271 Helicase conserved C-terminal domain JCM16456_RS06625 PF04851 Type III restriction enzyme, res subunit JCM16456_RS06630 PF00849 RNA pseudouridylate synthase JCM16456_RS06630 PF01479 S4 domain JCM16456_RS06635 PF07690 Major Facilitator Superfamily JCM16456_RS06645 PF11066 Protein of unknown function (DUF2867) JCM16456_RS06645 PF13460 NAD(P)H-binding JCM16456_RS06650 PF00005 ABC transporter JCM16456_RS06665 PF06965 Na+/H+ antiporter 1 JCM16456_RS06670 PF00202 Aminotransferase class-III JCM16456_RS06675 PF16653 Saccharopine dehydrogenase C-terminal domain JCM16456_RS06675 PF03435 Saccharopine dehydrogenase NADP binding domain JCM16456_RS06685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS06685 PF00672 HAMP domain JCM16456_RS06685 PF17200 Single Cache domain 2 JCM16456_RS06695 PF00994 Probable molybdopterin binding domain JCM16456_RS06705 PF00111 2Fe-2S iron-sulfur cluster binding domain JCM16456_RS06710 PF00268 Ribonucleotide reductase, small chain JCM16456_RS06715 PF03477 ATP cone domain JCM16456_RS06715 PF02867 Ribonucleotide reductase, barrel domain JCM16456_RS06715 PF00317 Ribonucleotide reductase, all-alpha domain JCM16456_RS06725 PF03989 DNA gyrase C-terminal domain, beta-propeller JCM16456_RS06725 PF00521 DNA gyrase/topoisomerase IV, subunit A JCM16456_RS06735 PF00925 GTP cyclohydrolase II JCM16456_RS06745 PF00753 Metallo-beta-lactamase superfamily JCM16456_RS06760 PF01047 MarR family JCM16456_RS06765 PF02028 BCCT, betaine/carnitine/choline family transporter JCM16456_RS06770 PF02743 Cache domain JCM16456_RS06770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS06770 PF00672 HAMP domain JCM16456_RS06775 PF00672 HAMP domain JCM16456_RS06775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS06775 PF02743 Cache domain JCM16456_RS06780 PF02811 PHP domain JCM16456_RS06780 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCM16456_RS06780 PF14579 Helix-hairpin-helix motif JCM16456_RS06780 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCM16456_RS06780 PF00929 Exonuclease JCM16456_RS06790 PF00155 Aminotransferase class I and II JCM16456_RS06795 PF01336 OB-fold nucleic acid binding domain JCM16456_RS06795 PF00152 tRNA synthetases class II (D, K and N) JCM16456_RS06810 PF02525 Flavodoxin-like fold JCM16456_RS06820 PF03466 LysR substrate binding domain JCM16456_RS06820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS06840 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JCM16456_RS06845 PF00132 Bacterial transferase hexapeptide (six repeats) JCM16456_RS06850 PF12833 Helix-turn-helix domain JCM16456_RS06850 PF06719 AraC-type transcriptional regulator N-terminus JCM16456_RS06855 PF07690 Major Facilitator Superfamily JCM16456_RS06860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS06860 PF03466 LysR substrate binding domain JCM16456_RS06870 PF00561 alpha/beta hydrolase fold JCM16456_RS06895 PF12833 Helix-turn-helix domain JCM16456_RS06900 PF00202 Aminotransferase class-III JCM16456_RS06905 PF04958 Arginine N-succinyltransferase beta subunit JCM16456_RS06910 PF04958 Arginine N-succinyltransferase beta subunit JCM16456_RS06915 PF00171 Aldehyde dehydrogenase family JCM16456_RS06920 PF04996 Succinylarginine dihydrolase JCM16456_RS06930 PF07702 UTRA domain JCM16456_RS06930 PF00392 Bacterial regulatory proteins, gntR family JCM16456_RS06935 PF10397 Adenylosuccinate lyase C-terminus JCM16456_RS06935 PF00206 Lyase JCM16456_RS06940 PF00939 Sodium:sulfate symporter transmembrane region JCM16456_RS06945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS06945 PF03466 LysR substrate binding domain JCM16456_RS06950 PF07690 Major Facilitator Superfamily JCM16456_RS06955 PF04400 (Na+)-NQR maturation NqrM JCM16456_RS06965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS06965 PF12729 Four helix bundle sensory module for signal transduction JCM16456_RS06965 PF00672 HAMP domain JCM16456_RS06970 PF13458 Periplasmic binding protein JCM16456_RS06985 PF00155 Aminotransferase class I and II JCM16456_RS07015 PF02223 Thymidylate kinase JCM16456_RS07030 PF00083 Sugar (and other) transporter JCM16456_RS07045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS07045 PF03466 LysR substrate binding domain JCM16456_RS07060 PF00579 tRNA synthetases class I (W and Y) JCM16456_RS07065 PF00196 Bacterial regulatory proteins, luxR family JCM16456_RS07070 PF01209 ubiE/COQ5 methyltransferase family JCM16456_RS07075 PF00149 Calcineurin-like phosphoesterase JCM16456_RS07085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCM16456_RS07100 PF00970 Oxidoreductase FAD-binding domain JCM16456_RS07100 PF00175 Oxidoreductase NAD-binding domain JCM16456_RS07120 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system JCM16456_RS07125 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA JCM16456_RS07150 PF07690 Major Facilitator Superfamily JCM16456_RS07155 PF00356 Bacterial regulatory proteins, lacI family JCM16456_RS07160 PF00005 ABC transporter JCM16456_RS07160 PF17912 MalK OB fold domain JCM16456_RS07165 PF13416 Bacterial extracellular solute-binding protein JCM16456_RS07170 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS07175 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS07180 PF07745 Glycosyl hydrolase family 53 JCM16456_RS07185 PF08532 Beta-galactosidase trimerisation domain JCM16456_RS07185 PF08533 Beta-galactosidase C-terminal domain JCM16456_RS07185 PF02449 Beta-galactosidase JCM16456_RS07190 PF02264 LamB porin JCM16456_RS07195 PF07745 Glycosyl hydrolase family 53 JCM16456_RS07200 PF12833 Helix-turn-helix domain JCM16456_RS07210 PF00106 short chain dehydrogenase JCM16456_RS07225 PF00005 ABC transporter JCM16456_RS07230 PF02361 Cobalt transport protein JCM16456_RS07235 PF02632 BioY family JCM16456_RS07240 PF09825 Biotin-protein ligase, N terminal JCM16456_RS07245 PF00271 Helicase conserved C-terminal domain JCM16456_RS07245 PF00270 DEAD/DEAH box helicase JCM16456_RS07250 PF01242 6-pyruvoyl tetrahydropterin synthase JCM16456_RS07255 PF02321 Outer membrane efflux protein JCM16456_RS07260 PF12704 MacB-like periplasmic core domain JCM16456_RS07260 PF00005 ABC transporter JCM16456_RS07260 PF02687 FtsX-like permease family JCM16456_RS07265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCM16456_RS07270 PF03313 Serine dehydratase alpha chain JCM16456_RS07270 PF03315 Serine dehydratase beta chain JCM16456_RS07275 PF03222 Tryptophan/tyrosine permease family JCM16456_RS07280 PF00293 NUDIX domain JCM16456_RS07285 PF04715 Anthranilate synthase component I, N terminal region JCM16456_RS07285 PF00425 chorismate binding enzyme JCM16456_RS07300 PF04317 YcjX-like family, DUF463 JCM16456_RS07305 PF05128 Domain of unknown function (DUF697) JCM16456_RS07310 PF18024 Helix-turn-helix domain JCM16456_RS07310 PF00158 Sigma-54 interaction domain JCM16456_RS07315 PF13302 Acetyltransferase (GNAT) domain JCM16456_RS07325 PF00375 Sodium:dicarboxylate symporter family JCM16456_RS07330 PF03466 LysR substrate binding domain JCM16456_RS07330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS07340 PF00881 Nitroreductase family JCM16456_RS07345 PF01970 Tripartite tricarboxylate transporter TctA family JCM16456_RS07355 PF03401 Tripartite tricarboxylate transporter family receptor JCM16456_RS07370 PF00285 Citrate synthase, C-terminal domain JCM16456_RS07375 PF03972 MmgE/PrpD family JCM16456_RS07380 PF13193 AMP-binding enzyme C-terminal domain JCM16456_RS07380 PF00501 AMP-binding enzyme JCM16456_RS07380 PF16177 Acetyl-coenzyme A synthetase N-terminus JCM16456_RS07395 PF12792 CSS motif domain associated with EAL JCM16456_RS07395 PF00563 EAL domain JCM16456_RS07400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCM16456_RS07405 PF04209 homogentisate 1,2-dioxygenase JCM16456_RS07415 PF14497 Glutathione S-transferase, C-terminal domain JCM16456_RS07415 PF02798 Glutathione S-transferase, N-terminal domain JCM16456_RS07425 PF12729 Four helix bundle sensory module for signal transduction JCM16456_RS07425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS07425 PF00672 HAMP domain JCM16456_RS07430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS07430 PF03466 LysR substrate binding domain JCM16456_RS07435 PF05870 Phenolic acid decarboxylase (PAD) JCM16456_RS07440 PF03009 Glycerophosphoryl diester phosphodiesterase family JCM16456_RS07445 PF08220 DeoR-like helix-turn-helix domain JCM16456_RS07445 PF00455 DeoR C terminal sensor domain JCM16456_RS07450 PF17912 MalK OB fold domain JCM16456_RS07450 PF00005 ABC transporter JCM16456_RS07455 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS07460 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS07465 PF13416 Bacterial extracellular solute-binding protein JCM16456_RS07470 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JCM16456_RS07470 PF00056 lactate/malate dehydrogenase, NAD binding domain JCM16456_RS07475 PF08212 Lipocalin-like domain JCM16456_RS07485 PF01618 MotA/TolQ/ExbB proton channel family JCM16456_RS07490 PF01618 MotA/TolQ/ExbB proton channel family JCM16456_RS07495 PF02472 Biopolymer transport protein ExbD/TolR JCM16456_RS07500 PF03544 Gram-negative bacterial TonB protein C-terminal JCM16456_RS07530 PF01554 MatE JCM16456_RS07535 PF00677 Lumazine binding domain JCM16456_RS07545 PF03881 Fructosamine kinase JCM16456_RS07555 PF00877 NlpC/P60 family JCM16456_RS07565 PF00480 ROK family JCM16456_RS07575 PF00994 Probable molybdopterin binding domain JCM16456_RS07575 PF03453 MoeA N-terminal region (domain I and II) JCM16456_RS07575 PF03454 MoeA C-terminal region (domain IV) JCM16456_RS07580 PF12804 MobA-like NTP transferase domain JCM16456_RS07585 PF02954 Bacterial regulatory protein, Fis family JCM16456_RS07585 PF00072 Response regulator receiver domain JCM16456_RS07585 PF00158 Sigma-54 interaction domain JCM16456_RS07590 PF00909 Ammonium Transporter Family JCM16456_RS07595 PF02146 Sir2 family JCM16456_RS07600 PF13416 Bacterial extracellular solute-binding protein JCM16456_RS07605 PF13416 Bacterial extracellular solute-binding protein JCM16456_RS07610 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS07615 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS07620 PF08402 TOBE domain JCM16456_RS07620 PF00005 ABC transporter JCM16456_RS07635 PF01171 PP-loop family JCM16456_RS07640 PF00582 Universal stress protein family JCM16456_RS07645 PF13545 Crp-like helix-turn-helix domain JCM16456_RS07645 PF00027 Cyclic nucleotide-binding domain JCM16456_RS07660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS07660 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS07660 PF00072 Response regulator receiver domain JCM16456_RS07660 PF09308 LuxQ, periplasmic JCM16456_RS07680 PF06303 MatP N-terminal domain JCM16456_RS07680 PF17414 MatP C-terminal ribbon-helix-helix domain JCM16456_RS07685 PF05362 Lon protease (S16) C-terminal proteolytic domain JCM16456_RS07685 PF13654 AAA domain JCM16456_RS07690 PF07977 FabA-like domain JCM16456_RS07700 PF16326 ABC transporter C-terminal domain JCM16456_RS07700 PF00005 ABC transporter JCM16456_RS07700 PF12848 ABC transporter JCM16456_RS07710 PF01170 Putative RNA methylase family UPF0020 JCM16456_RS07710 PF02926 THUMP domain JCM16456_RS07710 PF10672 S-adenosylmethionine-dependent methyltransferase JCM16456_RS07715 PF07126 Cell-division protein ZapC JCM16456_RS07720 PF01180 Dihydroorotate dehydrogenase JCM16456_RS07725 PF05088 Bacterial NAD-glutamate dehydrogenase JCM16456_RS07730 PF01433 Peptidase family M1 domain JCM16456_RS07730 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JCM16456_RS07730 PF11940 Domain of unknown function (DUF3458) Ig-like fold JCM16456_RS07740 PF00595 PDZ domain JCM16456_RS07740 PF03572 Peptidase family S41 JCM16456_RS07740 PF17804 Tail specific protease N-terminal domain JCM16456_RS07740 PF11818 C-terminal domain of tail specific protease (DUF3340) JCM16456_RS07745 PF04352 ProQ/FINO family JCM16456_RS07745 PF17516 ProQ C-terminal domain JCM16456_RS07750 PF13185 GAF domain JCM16456_RS07755 PF00664 ABC transporter transmembrane region JCM16456_RS07755 PF00005 ABC transporter JCM16456_RS07760 PF04403 Paraquat-inducible protein A JCM16456_RS07765 PF02470 MlaD protein JCM16456_RS07770 PF01189 16S rRNA methyltransferase RsmB/F JCM16456_RS07770 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JCM16456_RS07770 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF JCM16456_RS07775 PF17783 CvfB-like winged helix domain JCM16456_RS07775 PF13509 S1 domain JCM16456_RS07785 PF02896 PEP-utilising enzyme, TIM barrel domain JCM16456_RS07785 PF00391 PEP-utilising enzyme, mobile domain JCM16456_RS07785 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JCM16456_RS07790 PF00793 DAHP synthetase I family JCM16456_RS07795 PF04461 Protein of unknown function (DUF520) JCM16456_RS07805 PF01235 Sodium:alanine symporter family JCM16456_RS07815 PF01810 LysE type translocator JCM16456_RS07855 PF13808 DDE_Tnp_1-associated JCM16456_RS07855 PF01609 Transposase DDE domain JCM16456_RS07880 PF04717 Type VI secretion system, phage-baseplate injector JCM16456_RS07885 PF05638 Type VI secretion system effector, Hcp JCM16456_RS07890 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JCM16456_RS07900 PF00271 Helicase conserved C-terminal domain JCM16456_RS07900 PF00270 DEAD/DEAH box helicase JCM16456_RS07900 PF04408 Helicase associated domain (HA2) JCM16456_RS07900 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JCM16456_RS07900 PF11898 Domain of unknown function (DUF3418) JCM16456_RS07905 PF02525 Flavodoxin-like fold JCM16456_RS07935 PF00012 Hsp70 protein JCM16456_RS07940 PF00012 Hsp70 protein JCM16456_RS07945 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS07955 PF03707 Bacterial signalling protein N terminal repeat JCM16456_RS07955 PF00563 EAL domain JCM16456_RS07955 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS07970 PF00975 Thioesterase domain JCM16456_RS07970 PF13193 AMP-binding enzyme C-terminal domain JCM16456_RS07970 PF00501 AMP-binding enzyme JCM16456_RS07970 PF00668 Condensation domain JCM16456_RS07970 PF00550 Phosphopantetheine attachment site JCM16456_RS07975 PF00975 Thioesterase domain JCM16456_RS07975 PF13193 AMP-binding enzyme C-terminal domain JCM16456_RS07975 PF00501 AMP-binding enzyme JCM16456_RS07975 PF00550 Phosphopantetheine attachment site JCM16456_RS07975 PF00668 Condensation domain JCM16456_RS07980 PF00005 ABC transporter JCM16456_RS07985 PF00975 Thioesterase domain JCM16456_RS07985 PF00668 Condensation domain JCM16456_RS07985 PF00501 AMP-binding enzyme JCM16456_RS07985 PF13193 AMP-binding enzyme C-terminal domain JCM16456_RS07985 PF00550 Phosphopantetheine attachment site JCM16456_RS07990 PF00501 AMP-binding enzyme JCM16456_RS07990 PF13193 AMP-binding enzyme C-terminal domain JCM16456_RS07990 PF00668 Condensation domain JCM16456_RS07990 PF00550 Phosphopantetheine attachment site JCM16456_RS07990 PF00975 Thioesterase domain JCM16456_RS07995 PF00550 Phosphopantetheine attachment site JCM16456_RS07995 PF00975 Thioesterase domain JCM16456_RS07995 PF00668 Condensation domain JCM16456_RS07995 PF13193 AMP-binding enzyme C-terminal domain JCM16456_RS07995 PF00501 AMP-binding enzyme JCM16456_RS08000 PF01648 4'-phosphopantetheinyl transferase superfamily JCM16456_RS08000 PF17837 4'-phosphopantetheinyl transferase N-terminal domain JCM16456_RS08005 PF13417 Glutathione S-transferase, N-terminal domain JCM16456_RS08005 PF04399 Glutaredoxin 2, C terminal domain JCM16456_RS08010 PF06508 Queuosine biosynthesis protein QueC JCM16456_RS08015 PF04055 Radical SAM superfamily JCM16456_RS08025 PF14824 Sirohaem biosynthesis protein central JCM16456_RS08025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCM16456_RS08025 PF10414 Sirohaem synthase dimerisation region JCM16456_RS08035 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCM16456_RS08040 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS08045 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS08050 PF00005 ABC transporter JCM16456_RS08055 PF01027 Inhibitor of apoptosis-promoting Bax1 JCM16456_RS08060 PF04358 DsrC like protein JCM16456_RS08065 PF00708 Acylphosphatase JCM16456_RS08070 PF10672 S-adenosylmethionine-dependent methyltransferase JCM16456_RS08070 PF17785 PUA-like domain JCM16456_RS08075 PF00106 short chain dehydrogenase JCM16456_RS08080 PF00248 Aldo/keto reductase family JCM16456_RS08085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS08085 PF16591 Helical bimodular sensor domain JCM16456_RS08085 PF00672 HAMP domain JCM16456_RS08090 PF01584 CheW-like domain JCM16456_RS08095 PF00072 Response regulator receiver domain JCM16456_RS08095 PF01339 CheB methylesterase JCM16456_RS08105 PF01739 CheR methyltransferase, SAM binding domain JCM16456_RS08105 PF03705 CheR methyltransferase, all-alpha domain JCM16456_RS08110 PF01627 Hpt domain JCM16456_RS08110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS08110 PF01584 CheW-like domain JCM16456_RS08110 PF00072 Response regulator receiver domain JCM16456_RS08115 PF01627 Hpt domain JCM16456_RS08115 PF01584 CheW-like domain JCM16456_RS08115 PF07194 P2 response regulator binding domain JCM16456_RS08115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS08115 PF02895 Signal transducing histidine kinase, homodimeric domain JCM16456_RS08125 PF00072 Response regulator receiver domain JCM16456_RS08130 PF00672 HAMP domain JCM16456_RS08130 PF02743 Cache domain JCM16456_RS08130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS08135 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JCM16456_RS08140 PF03824 High-affinity nickel-transport protein JCM16456_RS08165 PF14602 Hexapeptide repeat of succinyl-transferase JCM16456_RS08165 PF00132 Bacterial transferase hexapeptide (six repeats) JCM16456_RS08165 PF12804 MobA-like NTP transferase domain JCM16456_RS08170 PF01965 DJ-1/PfpI family JCM16456_RS08205 PF01609 Transposase DDE domain JCM16456_RS08205 PF13808 DDE_Tnp_1-associated JCM16456_RS08215 PF01266 FAD dependent oxidoreductase JCM16456_RS08220 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCM16456_RS08220 PF04324 BFD-like [2Fe-2S] binding domain JCM16456_RS08255 PF08267 Cobalamin-independent synthase, N-terminal domain JCM16456_RS08255 PF01717 Cobalamin-independent synthase, Catalytic domain JCM16456_RS08260 PF02424 ApbE family JCM16456_RS08265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS08265 PF03466 LysR substrate binding domain JCM16456_RS08270 PF00890 FAD binding domain JCM16456_RS08270 PF04205 FMN-binding domain JCM16456_RS08270 PF03358 NADPH-dependent FMN reductase JCM16456_RS08275 PF03358 NADPH-dependent FMN reductase JCM16456_RS08275 PF04205 FMN-binding domain JCM16456_RS08275 PF00890 FAD binding domain JCM16456_RS08280 PF07690 Major Facilitator Superfamily JCM16456_RS08285 PF01614 Bacterial transcriptional regulator JCM16456_RS08285 PF09339 IclR helix-turn-helix domain JCM16456_RS08300 PF13229 Right handed beta helix region JCM16456_RS08305 PF17200 Single Cache domain 2 JCM16456_RS08305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS08305 PF00672 HAMP domain JCM16456_RS08310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS08310 PF03466 LysR substrate binding domain JCM16456_RS08315 PF00107 Zinc-binding dehydrogenase JCM16456_RS08315 PF08240 Alcohol dehydrogenase GroES-like domain JCM16456_RS08320 PF00465 Iron-containing alcohol dehydrogenase JCM16456_RS08330 PF07690 Major Facilitator Superfamily JCM16456_RS08335 PF00106 short chain dehydrogenase JCM16456_RS08340 PF00892 EamA-like transporter family JCM16456_RS08350 PF00155 Aminotransferase class I and II JCM16456_RS08350 PF00392 Bacterial regulatory proteins, gntR family JCM16456_RS08370 PF01638 HxlR-like helix-turn-helix JCM16456_RS08385 PF00155 Aminotransferase class I and II JCM16456_RS08390 PF02595 Glycerate kinase family JCM16456_RS08395 PF02447 GntP family permease JCM16456_RS08400 PF17853 GGDEF-like domain JCM16456_RS08400 PF13556 PucR C-terminal helix-turn-helix domain JCM16456_RS08400 PF05651 Putative sugar diacid recognition JCM16456_RS08405 PF00581 Rhodanese-like domain JCM16456_RS08405 PF17773 UPF0176 acylphosphatase like domain JCM16456_RS08410 PF05552 Conserved TM helix JCM16456_RS08410 PF00924 Mechanosensitive ion channel JCM16456_RS08415 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JCM16456_RS08415 PF00056 lactate/malate dehydrogenase, NAD binding domain JCM16456_RS08425 PF05221 S-adenosyl-L-homocysteine hydrolase JCM16456_RS08425 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JCM16456_RS08440 PF08447 PAS fold JCM16456_RS08440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS08440 PF13426 PAS domain JCM16456_RS08445 PF00232 Glycosyl hydrolase family 1 JCM16456_RS08455 PF01784 NIF3 (NGG1p interacting factor 3) JCM16456_RS08465 PF13673 Acetyltransferase (GNAT) domain JCM16456_RS08470 PF00232 Glycosyl hydrolase family 1 JCM16456_RS08475 PF02378 Phosphotransferase system, EIIC JCM16456_RS08475 PF00367 phosphotransferase system, EIIB JCM16456_RS08475 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCM16456_RS08480 PF00874 PRD domain JCM16456_RS08480 PF03123 CAT RNA binding domain JCM16456_RS08515 PF00962 Adenosine/AMP deaminase JCM16456_RS08520 PF03707 Bacterial signalling protein N terminal repeat JCM16456_RS08520 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS08520 PF00563 EAL domain JCM16456_RS08525 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like JCM16456_RS08530 PF06942 GlpM protein JCM16456_RS08535 PF00293 NUDIX domain JCM16456_RS08540 PF02386 Cation transport protein JCM16456_RS08545 PF00072 Response regulator receiver domain JCM16456_RS08545 PF00486 Transcriptional regulatory protein, C terminal JCM16456_RS08550 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS08550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS08550 PF13493 Domain of unknown function (DUF4118) JCM16456_RS08550 PF02702 Osmosensitive K+ channel His kinase sensor domain JCM16456_RS08555 PF14602 Hexapeptide repeat of succinyl-transferase JCM16456_RS08555 PF12464 Maltose acetyltransferase JCM16456_RS08560 PF14480 DNA polymerase III polC-type N-terminus I JCM16456_RS08560 PF11490 DNA polymerase III polC-type N-terminus II JCM16456_RS08560 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCM16456_RS08560 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCM16456_RS08560 PF02811 PHP domain JCM16456_RS08560 PF00929 Exonuclease JCM16456_RS08575 PF12833 Helix-turn-helix domain JCM16456_RS08575 PF14525 AraC-binding-like domain JCM16456_RS08580 PF07683 Cobalamin synthesis protein cobW C-terminal domain JCM16456_RS08580 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCM16456_RS08595 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS08595 PF05230 MASE2 domain JCM16456_RS08605 PF00072 Response regulator receiver domain JCM16456_RS08605 PF01584 CheW-like domain JCM16456_RS08620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCM16456_RS08640 PF04204 Homoserine O-succinyltransferase JCM16456_RS08655 PF05971 RNA methyltransferase JCM16456_RS08660 PF01863 Protein of unknown function DUF45 JCM16456_RS08670 PF03466 LysR substrate binding domain JCM16456_RS08670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS08675 PF07690 Major Facilitator Superfamily JCM16456_RS08700 PF00005 ABC transporter JCM16456_RS08705 PF01032 FecCD transport family JCM16456_RS08710 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JCM16456_RS08715 PF02277 Phosphoribosyltransferase JCM16456_RS08720 PF13460 NAD(P)H-binding JCM16456_RS08730 PF00375 Sodium:dicarboxylate symporter family JCM16456_RS08750 PF00881 Nitroreductase family JCM16456_RS08755 PF00012 Hsp70 protein JCM16456_RS08760 PF03211 Pectate lyase JCM16456_RS08765 PF01546 Peptidase family M20/M25/M40 JCM16456_RS08770 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) JCM16456_RS08775 PF05656 Protein of unknown function (DUF805) JCM16456_RS08785 PF01381 Helix-turn-helix JCM16456_RS08790 PF00892 EamA-like transporter family JCM16456_RS08795 PF03466 LysR substrate binding domain JCM16456_RS08795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS08800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCM16456_RS08800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JCM16456_RS08805 PF00171 Aldehyde dehydrogenase family JCM16456_RS08810 PF01546 Peptidase family M20/M25/M40 JCM16456_RS08810 PF07687 Peptidase dimerisation domain JCM16456_RS08825 PF07690 Major Facilitator Superfamily JCM16456_RS08835 PF00691 OmpA family JCM16456_RS08840 PF01095 Pectinesterase JCM16456_RS08845 PF00271 Helicase conserved C-terminal domain JCM16456_RS08845 PF03880 DbpA RNA binding domain JCM16456_RS08845 PF00270 DEAD/DEAH box helicase JCM16456_RS08855 PF09905 DNA-binding protein VF530 JCM16456_RS08865 PF00672 HAMP domain JCM16456_RS08865 PF02743 Cache domain JCM16456_RS08865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS08880 PF00486 Transcriptional regulatory protein, C terminal JCM16456_RS08880 PF00072 Response regulator receiver domain JCM16456_RS08885 PF00672 HAMP domain JCM16456_RS08885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS08885 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS08890 PF01451 Low molecular weight phosphotyrosine protein phosphatase JCM16456_RS08895 PF13401 AAA domain JCM16456_RS08895 PF01471 Putative peptidoglycan binding domain JCM16456_RS08905 PF13614 AAA domain JCM16456_RS08915 PF10531 SLBB domain JCM16456_RS08915 PF02563 Polysaccharide biosynthesis/export protein JCM16456_RS08920 PF02397 Bacterial sugar transferase JCM16456_RS08925 PF01522 Polysaccharide deacetylase JCM16456_RS08945 PF00733 Asparagine synthase JCM16456_RS08945 PF13537 Glutamine amidotransferase domain JCM16456_RS08950 PF13439 Glycosyltransferase Family 4 JCM16456_RS08950 PF00534 Glycosyl transferases group 1 JCM16456_RS08955 PF00534 Glycosyl transferases group 1 JCM16456_RS08955 PF13439 Glycosyltransferase Family 4 JCM16456_RS08970 PF03466 LysR substrate binding domain JCM16456_RS08970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS08985 PF13817 IS66 C-terminal element JCM16456_RS08985 PF03050 Transposase IS66 family JCM16456_RS08985 PF13007 Transposase C of IS166 homeodomain JCM16456_RS08985 PF13005 zinc-finger binding domain of transposase IS66 JCM16456_RS08995 PF03466 LysR substrate binding domain JCM16456_RS08995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS09000 PF00701 Dihydrodipicolinate synthetase family JCM16456_RS09010 PF00857 Isochorismatase family JCM16456_RS09050 PF13439 Glycosyltransferase Family 4 JCM16456_RS09050 PF00534 Glycosyl transferases group 1 JCM16456_RS09055 PF00288 GHMP kinases N terminal domain JCM16456_RS09055 PF08544 GHMP kinases C terminal JCM16456_RS09060 PF00483 Nucleotidyl transferase JCM16456_RS09065 PF04230 Polysaccharide pyruvyl transferase JCM16456_RS09075 PF01501 Glycosyl transferase family 8 JCM16456_RS09090 PF01451 Low molecular weight phosphotyrosine protein phosphatase JCM16456_RS09110 PF13180 PDZ domain JCM16456_RS09135 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS09135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS09140 PF00072 Response regulator receiver domain JCM16456_RS09140 PF02954 Bacterial regulatory protein, Fis family JCM16456_RS09140 PF00158 Sigma-54 interaction domain JCM16456_RS09150 PF17131 Outer membrane lipoprotein-sorting protein JCM16456_RS09165 PF00929 Exonuclease JCM16456_RS09165 PF08411 Exonuclease C-terminal JCM16456_RS09170 PF03788 LrgA family JCM16456_RS09175 PF04172 LrgB-like family JCM16456_RS09180 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region JCM16456_RS09180 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JCM16456_RS09185 PF02222 ATP-grasp domain JCM16456_RS09190 PF05724 Thiopurine S-methyltransferase (TPMT) JCM16456_RS09200 PF00216 Bacterial DNA-binding protein JCM16456_RS09205 PF03484 tRNA synthetase B5 domain JCM16456_RS09205 PF03147 Ferredoxin-fold anticodon binding domain JCM16456_RS09205 PF03483 B3/4 domain JCM16456_RS09205 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JCM16456_RS09205 PF01588 Putative tRNA binding domain JCM16456_RS09210 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JCM16456_RS09210 PF01409 tRNA synthetases class II core domain (F) JCM16456_RS09215 PF00583 Acetyltransferase (GNAT) family JCM16456_RS09245 PF01066 CDP-alcohol phosphatidyltransferase JCM16456_RS09250 PF01541 GIY-YIG catalytic domain JCM16456_RS09250 PF02151 UvrB/uvrC motif JCM16456_RS09250 PF08459 UvrC Helix-hairpin-helix N-terminal JCM16456_RS09255 PF00072 Response regulator receiver domain JCM16456_RS09255 PF00196 Bacterial regulatory proteins, luxR family JCM16456_RS09260 PF00136 DNA polymerase family B JCM16456_RS09260 PF03104 DNA polymerase family B, exonuclease domain JCM16456_RS09270 PF09285 Elongation factor P, C-terminal JCM16456_RS09270 PF08207 Elongation factor P (EF-P) KOW-like domain JCM16456_RS09270 PF01132 Elongation factor P (EF-P) OB domain JCM16456_RS09275 PF04269 Protein of unknown function, DUF440 JCM16456_RS09280 PF04266 ASCH domain JCM16456_RS09295 PF02913 FAD linked oxidases, C-terminal domain JCM16456_RS09295 PF01565 FAD binding domain JCM16456_RS09295 PF13183 4Fe-4S dicluster domain JCM16456_RS09325 PF01259 SAICAR synthetase JCM16456_RS09335 PF00356 Bacterial regulatory proteins, lacI family JCM16456_RS09345 PF03313 Serine dehydratase alpha chain JCM16456_RS09355 PF00288 GHMP kinases N terminal domain JCM16456_RS09355 PF08544 GHMP kinases C terminal JCM16456_RS09355 PF10509 Galactokinase galactose-binding signature JCM16456_RS09360 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JCM16456_RS09360 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JCM16456_RS09365 PF16363 GDP-mannose 4,6 dehydratase JCM16456_RS09370 PF00390 Malic enzyme, N-terminal domain JCM16456_RS09370 PF03949 Malic enzyme, NAD binding domain JCM16456_RS09380 PF02698 DUF218 domain JCM16456_RS09395 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JCM16456_RS09395 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JCM16456_RS09400 PF01022 Bacterial regulatory protein, arsR family JCM16456_RS09415 PF00722 Glycosyl hydrolases family 16 JCM16456_RS09425 PF00043 Glutathione S-transferase, C-terminal domain JCM16456_RS09425 PF13417 Glutathione S-transferase, N-terminal domain JCM16456_RS09435 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JCM16456_RS09440 PF13673 Acetyltransferase (GNAT) domain JCM16456_RS09465 PF00293 NUDIX domain JCM16456_RS09470 PF00583 Acetyltransferase (GNAT) family JCM16456_RS09485 PF13419 Haloacid dehalogenase-like hydrolase JCM16456_RS09490 PF00293 NUDIX domain JCM16456_RS09490 PF13344 Haloacid dehalogenase-like hydrolase JCM16456_RS09515 PF02567 Phenazine biosynthesis-like protein JCM16456_RS09520 PF01966 HD domain JCM16456_RS09535 PF01810 LysE type translocator JCM16456_RS09580 PF01548 Transposase JCM16456_RS09580 PF02371 Transposase IS116/IS110/IS902 family JCM16456_RS09585 PF13419 Haloacid dehalogenase-like hydrolase JCM16456_RS09605 PF01636 Phosphotransferase enzyme family JCM16456_RS09610 PF13495 Phage integrase, N-terminal SAM-like domain JCM16456_RS09610 PF00589 Phage integrase family JCM16456_RS09620 PF00266 Aminotransferase class-V JCM16456_RS09630 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCM16456_RS09635 PF00005 ABC transporter JCM16456_RS09635 PF00664 ABC transporter transmembrane region JCM16456_RS09640 PF00664 ABC transporter transmembrane region JCM16456_RS09640 PF00005 ABC transporter JCM16456_RS09645 PF01479 S4 domain JCM16456_RS09645 PF00849 RNA pseudouridylate synthase JCM16456_RS09650 PF01300 Telomere recombination JCM16456_RS09655 PF02811 PHP domain JCM16456_RS09660 PF04715 Anthranilate synthase component I, N terminal region JCM16456_RS09660 PF00425 chorismate binding enzyme JCM16456_RS09665 PF00117 Glutamine amidotransferase class-I JCM16456_RS09670 PF02885 Glycosyl transferase family, helical bundle domain JCM16456_RS09670 PF00591 Glycosyl transferase family, a/b domain JCM16456_RS09675 PF00218 Indole-3-glycerol phosphate synthase JCM16456_RS09675 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JCM16456_RS09680 PF00291 Pyridoxal-phosphate dependent enzyme JCM16456_RS09685 PF00290 Tryptophan synthase alpha chain JCM16456_RS09690 PF00375 Sodium:dicarboxylate symporter family JCM16456_RS09695 PF04279 Intracellular septation protein A JCM16456_RS09700 PF03061 Thioesterase superfamily JCM16456_RS09705 PF03795 YCII-related domain JCM16456_RS09715 PF01717 Cobalamin-independent synthase, Catalytic domain JCM16456_RS09715 PF08267 Cobalamin-independent synthase, N-terminal domain JCM16456_RS09720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS09720 PF03466 LysR substrate binding domain JCM16456_RS09735 PF00675 Insulinase (Peptidase family M16) JCM16456_RS09735 PF05193 Peptidase M16 inactive domain JCM16456_RS09740 PF02743 Cache domain JCM16456_RS09740 PF00672 HAMP domain JCM16456_RS09740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS09750 PF08497 Radical SAM N-terminal JCM16456_RS09750 PF11842 Domain of unknown function (DUF3362) JCM16456_RS09750 PF04055 Radical SAM superfamily JCM16456_RS09755 PF00266 Aminotransferase class-V JCM16456_RS09770 PF00005 ABC transporter JCM16456_RS09775 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCM16456_RS09780 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS09785 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS09800 PF04993 TfoX N-terminal domain JCM16456_RS09800 PF04994 TfoX C-terminal domain JCM16456_RS09810 PF00282 Pyridoxal-dependent decarboxylase conserved domain JCM16456_RS09815 PF01380 SIS domain JCM16456_RS09815 PF01418 Helix-turn-helix domain, rpiR family JCM16456_RS09820 PF00465 Iron-containing alcohol dehydrogenase JCM16456_RS09825 PF00462 Glutaredoxin JCM16456_RS09830 PF02080 TrkA-C domain JCM16456_RS09830 PF06826 Predicted Permease Membrane Region JCM16456_RS09835 PF12241 Trans-2-enoyl-CoA reductase catalytic region JCM16456_RS09835 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JCM16456_RS09835 PF07055 Enoyl reductase FAD binding domain JCM16456_RS09840 PF09317 Domain of unknown function (DUF1974) JCM16456_RS09840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCM16456_RS09840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCM16456_RS09840 PF02770 Acyl-CoA dehydrogenase, middle domain JCM16456_RS09850 PF00465 Iron-containing alcohol dehydrogenase JCM16456_RS09855 PF00672 HAMP domain JCM16456_RS09855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS09865 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS09865 PF03707 Bacterial signalling protein N terminal repeat JCM16456_RS09865 PF00563 EAL domain JCM16456_RS09865 PF13188 PAS domain JCM16456_RS09870 PF08447 PAS fold JCM16456_RS09870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS09870 PF13426 PAS domain JCM16456_RS09875 PF07690 Major Facilitator Superfamily JCM16456_RS09880 PF00672 HAMP domain JCM16456_RS09880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS09885 PF00155 Aminotransferase class I and II JCM16456_RS09885 PF00392 Bacterial regulatory proteins, gntR family JCM16456_RS09890 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JCM16456_RS09905 PF13007 Transposase C of IS166 homeodomain JCM16456_RS09905 PF13817 IS66 C-terminal element JCM16456_RS09905 PF03050 Transposase IS66 family JCM16456_RS09905 PF13005 zinc-finger binding domain of transposase IS66 JCM16456_RS09910 PF01548 Transposase JCM16456_RS09910 PF02371 Transposase IS116/IS110/IS902 family JCM16456_RS09930 PF08676 MutL C terminal dimerisation domain JCM16456_RS09930 PF01119 DNA mismatch repair protein, C-terminal domain JCM16456_RS09935 PF00145 C-5 cytosine-specific DNA methylase JCM16456_RS09940 PF13007 Transposase C of IS166 homeodomain JCM16456_RS09940 PF03050 Transposase IS66 family JCM16456_RS09940 PF13817 IS66 C-terminal element JCM16456_RS09940 PF13005 zinc-finger binding domain of transposase IS66 JCM16456_RS09955 PF02447 GntP family permease JCM16456_RS09960 PF00920 Dehydratase family JCM16456_RS09965 PF00701 Dihydrodipicolinate synthetase family JCM16456_RS09970 PF01614 Bacterial transcriptional regulator JCM16456_RS09980 PF06610 L-alanine exporter JCM16456_RS09990 PF00291 Pyridoxal-phosphate dependent enzyme JCM16456_RS09995 PF01037 Lrp/AsnC ligand binding domain JCM16456_RS10000 PF02445 Quinolinate synthetase A protein JCM16456_RS10005 PF16331 TolA binding protein trimerisation JCM16456_RS10005 PF13174 Tetratricopeptide repeat JCM16456_RS10010 PF00691 OmpA family JCM16456_RS10015 PF04052 TolB amino-terminal domain JCM16456_RS10015 PF07676 WD40-like Beta Propeller Repeat JCM16456_RS10025 PF02472 Biopolymer transport protein ExbD/TolR JCM16456_RS10030 PF01618 MotA/TolQ/ExbB proton channel family JCM16456_RS10035 PF03061 Thioesterase superfamily JCM16456_RS10045 PF08173 Membrane bound YbgT-like protein JCM16456_RS10050 PF02322 Cytochrome bd terminal oxidase subunit II JCM16456_RS10055 PF01654 Cytochrome bd terminal oxidase subunit I JCM16456_RS10060 PF05496 Holliday junction DNA helicase RuvB P-loop domain JCM16456_RS10060 PF05491 RuvB C-terminal winged helix domain JCM16456_RS10060 PF17864 RuvB AAA lid domain JCM16456_RS10065 PF01330 RuvA N terminal domain JCM16456_RS10065 PF07499 RuvA, C-terminal domain JCM16456_RS10070 PF02075 Crossover junction endodeoxyribonuclease RuvC JCM16456_RS10075 PF09190 DALR domain JCM16456_RS10075 PF01406 tRNA synthetases class I (C) catalytic domain JCM16456_RS10080 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JCM16456_RS10085 PF00149 Calcineurin-like phosphoesterase JCM16456_RS10090 PF00563 EAL domain JCM16456_RS10090 PF08668 HDOD domain JCM16456_RS10095 PF02810 SEC-C motif JCM16456_RS10100 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JCM16456_RS10105 PF13609 Gram-negative porin JCM16456_RS10110 PF06733 DEAD_2 JCM16456_RS10110 PF13307 Helicase C-terminal domain JCM16456_RS10115 PF07445 Primosomal replication protein priC JCM16456_RS10120 PF10689 Protein of unknown function (DUF2496) JCM16456_RS10125 PF03372 Endonuclease/Exonuclease/phosphatase family JCM16456_RS10130 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS10135 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS10140 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCM16456_RS10145 PF00005 ABC transporter JCM16456_RS10150 PF02901 Pyruvate formate lyase-like JCM16456_RS10150 PF01228 Glycine radical JCM16456_RS10155 PF00672 HAMP domain JCM16456_RS10155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS10160 PF04055 Radical SAM superfamily JCM16456_RS10165 PF03887 YfbU domain JCM16456_RS10175 PF06798 PrkA serine protein kinase C-terminal domain JCM16456_RS10175 PF08298 PrkA AAA domain JCM16456_RS10180 PF04285 Protein of unknown function (DUF444) JCM16456_RS10185 PF04293 SpoVR like protein JCM16456_RS10190 PF02348 Cytidylyltransferase JCM16456_RS10195 PF03966 Trm112p-like protein JCM16456_RS10200 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JCM16456_RS10205 PF00005 ABC transporter JCM16456_RS10205 PF00664 ABC transporter transmembrane region JCM16456_RS10210 PF03772 Competence protein JCM16456_RS10210 PF00753 Metallo-beta-lactamase superfamily JCM16456_RS10210 PF13567 Domain of unknown function (DUF4131) JCM16456_RS10220 PF02687 FtsX-like permease family JCM16456_RS10220 PF12704 MacB-like periplasmic core domain JCM16456_RS10225 PF00005 ABC transporter JCM16456_RS10230 PF02687 FtsX-like permease family JCM16456_RS10230 PF12704 MacB-like periplasmic core domain JCM16456_RS10240 PF17757 UvrB interaction domain JCM16456_RS10240 PF03461 TRCF domain JCM16456_RS10240 PF00271 Helicase conserved C-terminal domain JCM16456_RS10240 PF00270 DEAD/DEAH box helicase JCM16456_RS10240 PF02559 CarD-like/TRCF domain JCM16456_RS10255 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCM16456_RS10260 PF05728 Uncharacterised protein family (UPF0227) JCM16456_RS10270 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JCM16456_RS10270 PF13036 Peptidoglycan-synthase activator LpoB JCM16456_RS10285 PF01230 HIT domain JCM16456_RS10295 PF00392 Bacterial regulatory proteins, gntR family JCM16456_RS10295 PF07840 FadR C-terminal domain JCM16456_RS10300 PF06450 Bacterial Na+/H+ antiporter B (NhaB) JCM16456_RS10305 PF02600 Disulfide bond formation protein DsbB JCM16456_RS10310 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JCM16456_RS10310 PF17854 FtsK alpha domain JCM16456_RS10310 PF09397 Ftsk gamma domain JCM16456_RS10310 PF01580 FtsK/SpoIIIE family JCM16456_RS10315 PF01037 Lrp/AsnC ligand binding domain JCM16456_RS10320 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JCM16456_RS10320 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JCM16456_RS10330 PF03466 LysR substrate binding domain JCM16456_RS10330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS10340 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JCM16456_RS10345 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JCM16456_RS10350 PF18073 Rubredoxin metal binding domain JCM16456_RS10355 PF06305 Lipopolysaccharide assembly protein A domain JCM16456_RS10360 PF00216 Bacterial DNA-binding protein JCM16456_RS10365 PF00575 S1 RNA binding domain JCM16456_RS10370 PF02224 Cytidylate kinase JCM16456_RS10380 PF13145 PPIC-type PPIASE domain JCM16456_RS10385 PF00216 Bacterial DNA-binding protein JCM16456_RS10390 PF00004 ATPase family associated with various cellular activities (AAA) JCM16456_RS10390 PF02190 ATP-dependent protease La (LON) substrate-binding domain JCM16456_RS10390 PF05362 Lon protease (S16) C-terminal proteolytic domain JCM16456_RS10395 PF07724 AAA domain (Cdc48 subfamily) JCM16456_RS10395 PF10431 C-terminal, D2-small domain, of ClpB protein JCM16456_RS10395 PF06689 ClpX C4-type zinc finger JCM16456_RS10400 PF00574 Clp protease JCM16456_RS10405 PF05697 Bacterial trigger factor protein (TF) JCM16456_RS10405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCM16456_RS10405 PF05698 Bacterial trigger factor protein (TF) C-terminus JCM16456_RS10410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS10410 PF02743 Cache domain JCM16456_RS10410 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS10415 PF02954 Bacterial regulatory protein, Fis family JCM16456_RS10415 PF00158 Sigma-54 interaction domain JCM16456_RS10415 PF00072 Response regulator receiver domain JCM16456_RS10420 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JCM16456_RS10425 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JCM16456_RS10430 PF03480 Bacterial extracellular solute-binding protein, family 7 JCM16456_RS10435 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JCM16456_RS10440 PF03315 Serine dehydratase beta chain JCM16456_RS10440 PF03313 Serine dehydratase alpha chain JCM16456_RS10445 PF00795 Carbon-nitrogen hydrolase JCM16456_RS10445 PF00583 Acetyltransferase (GNAT) family JCM16456_RS10455 PF00563 EAL domain JCM16456_RS10455 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS10455 PF03707 Bacterial signalling protein N terminal repeat JCM16456_RS10465 PF01810 LysE type translocator JCM16456_RS10470 PF14310 Fibronectin type III-like domain JCM16456_RS10470 PF00933 Glycosyl hydrolase family 3 N terminal domain JCM16456_RS10470 PF01915 Glycosyl hydrolase family 3 C-terminal domain JCM16456_RS10470 PF07691 PA14 domain JCM16456_RS10480 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain JCM16456_RS10480 PF04616 Glycosyl hydrolases family 43 JCM16456_RS10490 PF03600 Citrate transporter JCM16456_RS10500 PF07690 Major Facilitator Superfamily JCM16456_RS10510 PF00440 Bacterial regulatory proteins, tetR family JCM16456_RS10530 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JCM16456_RS10530 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JCM16456_RS10535 PF13406 Transglycosylase SLT domain JCM16456_RS10540 PF05166 YcgL domain JCM16456_RS10545 PF03775 Septum formation inhibitor MinC, C-terminal domain JCM16456_RS10545 PF05209 Septum formation inhibitor MinC, N-terminal domain JCM16456_RS10550 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JCM16456_RS10555 PF03776 Septum formation topological specificity factor MinE JCM16456_RS10565 PF00570 HRDC domain JCM16456_RS10565 PF01612 3'-5' exonuclease JCM16456_RS10570 PF13193 AMP-binding enzyme C-terminal domain JCM16456_RS10570 PF00501 AMP-binding enzyme JCM16456_RS10575 PF08241 Methyltransferase domain JCM16456_RS10575 PF12697 Alpha/beta hydrolase family JCM16456_RS10590 PF00814 Glycoprotease family JCM16456_RS10595 PF13307 Helicase C-terminal domain JCM16456_RS10595 PF04851 Type III restriction enzyme, res subunit JCM16456_RS10605 PF01842 ACT domain JCM16456_RS10605 PF00551 Formyl transferase JCM16456_RS10610 PF01343 Peptidase family S49 JCM16456_RS10615 PF00710 Asparaginase, N-terminal JCM16456_RS10615 PF17763 Glutaminase/Asparaginase C-terminal domain JCM16456_RS10620 PF07023 Protein of unknown function (DUF1315) JCM16456_RS10630 PF01641 SelR domain JCM16456_RS10635 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JCM16456_RS10635 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JCM16456_RS10640 PF01263 Aldose 1-epimerase JCM16456_RS10645 PF13847 Methyltransferase domain JCM16456_RS10655 PF03707 Bacterial signalling protein N terminal repeat JCM16456_RS10655 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS10655 PF00563 EAL domain JCM16456_RS10660 PF00672 HAMP domain JCM16456_RS10660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS10675 PF03692 Putative zinc- or iron-chelating domain JCM16456_RS10680 PF03692 Putative zinc- or iron-chelating domain JCM16456_RS10685 PF13662 Toprim domain JCM16456_RS10685 PF02132 RecR protein JCM16456_RS10690 PF02575 YbaB/EbfC DNA-binding family JCM16456_RS10695 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JCM16456_RS10695 PF12169 DNA polymerase III subunits gamma and tau domain III JCM16456_RS10695 PF12170 DNA polymerase III tau subunit V interacting with alpha JCM16456_RS10700 PF00156 Phosphoribosyl transferase domain JCM16456_RS10705 PF04304 Protein of unknown function (DUF454) JCM16456_RS10710 PF00072 Response regulator receiver domain JCM16456_RS10715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS10715 PF03466 LysR substrate binding domain JCM16456_RS10720 PF00881 Nitroreductase family JCM16456_RS10725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCM16456_RS10725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCM16456_RS10725 PF00378 Enoyl-CoA hydratase/isomerase JCM16456_RS10730 PF02803 Thiolase, C-terminal domain JCM16456_RS10730 PF00108 Thiolase, N-terminal domain JCM16456_RS10735 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JCM16456_RS10740 PF01451 Low molecular weight phosphotyrosine protein phosphatase JCM16456_RS10745 PF12557 Cob(I)alamin adenosyltransferase N terminal JCM16456_RS10745 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JCM16456_RS10750 PF05170 AsmA family JCM16456_RS10755 PF00485 Phosphoribulokinase / Uridine kinase family JCM16456_RS10760 PF10609 NUBPL iron-transfer P-loop NTPase JCM16456_RS10765 PF01588 Putative tRNA binding domain JCM16456_RS10765 PF09334 tRNA synthetases class I (M) JCM16456_RS10775 PF01048 Phosphorylase superfamily JCM16456_RS10785 PF00403 Heavy-metal-associated domain JCM16456_RS10790 PF00571 CBS domain JCM16456_RS10795 PF02391 MoaE protein JCM16456_RS10800 PF02597 ThiS family JCM16456_RS10805 PF01967 MoaC family JCM16456_RS10810 PF00994 Probable molybdopterin binding domain JCM16456_RS10815 PF06463 Molybdenum Cofactor Synthesis C JCM16456_RS10815 PF04055 Radical SAM superfamily JCM16456_RS10820 PF01933 Uncharacterised protein family UPF0052 JCM16456_RS10825 PF01627 Hpt domain JCM16456_RS10830 PF00072 Response regulator receiver domain JCM16456_RS10830 PF02954 Bacterial regulatory protein, Fis family JCM16456_RS10830 PF00158 Sigma-54 interaction domain JCM16456_RS10835 PF12344 Ultra-violet resistance protein B JCM16456_RS10835 PF02151 UvrB/uvrC motif JCM16456_RS10835 PF00271 Helicase conserved C-terminal domain JCM16456_RS10835 PF04851 Type III restriction enzyme, res subunit JCM16456_RS10835 PF17757 UvrB interaction domain JCM16456_RS10845 PF00486 Transcriptional regulatory protein, C terminal JCM16456_RS10845 PF00072 Response regulator receiver domain JCM16456_RS10850 PF18719 ArlS sensor domain JCM16456_RS10850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS10850 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS10860 PF02508 Rnf-Nqr subunit, membrane protein JCM16456_RS10865 PF04060 Putative Fe-S cluster JCM16456_RS10870 PF12838 4Fe-4S dicluster domain JCM16456_RS10870 PF13375 RnfC Barrel sandwich hybrid domain JCM16456_RS10870 PF10531 SLBB domain JCM16456_RS10870 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JCM16456_RS10875 PF03116 NQR2, RnfD, RnfE family JCM16456_RS10880 PF04205 FMN-binding domain JCM16456_RS10885 PF02508 Rnf-Nqr subunit, membrane protein JCM16456_RS10890 PF00633 Helix-hairpin-helix motif JCM16456_RS10890 PF10576 Iron-sulfur binding domain of endonuclease III JCM16456_RS10890 PF00730 HhH-GPD superfamily base excision DNA repair protein JCM16456_RS10895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCM16456_RS10900 PF10952 Protein of unknown function (DUF2753) JCM16456_RS10905 PF18393 MotY N-terminal domain JCM16456_RS10905 PF00691 OmpA family JCM16456_RS10910 PF00929 Exonuclease JCM16456_RS10915 PF03553 Na+/H+ antiporter family JCM16456_RS10915 PF13726 Na+-H+ antiporter family JCM16456_RS10920 PF00156 Phosphoribosyl transferase domain JCM16456_RS10925 PF02674 Colicin V production protein JCM16456_RS10930 PF05036 Sporulation related domain JCM16456_RS10935 PF08245 Mur ligase middle domain JCM16456_RS10935 PF02875 Mur ligase family, glutamate ligase domain JCM16456_RS10940 PF17848 Acetyl-coA carboxylase zinc finger domain JCM16456_RS10940 PF01039 Carboxyl transferase domain JCM16456_RS10945 PF01416 tRNA pseudouridine synthase JCM16456_RS10955 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JCM16456_RS10955 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCM16456_RS10960 PF02378 Phosphotransferase system, EIIC JCM16456_RS10960 PF00367 phosphotransferase system, EIIB JCM16456_RS10960 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCM16456_RS10965 PF01979 Amidohydrolase family JCM16456_RS10970 PF00480 ROK family JCM16456_RS10970 PF01047 MarR family JCM16456_RS10975 PF00999 Sodium/hydrogen exchanger family JCM16456_RS10975 PF02254 TrkA-N domain JCM16456_RS10980 PF13537 Glutamine amidotransferase domain JCM16456_RS10980 PF00733 Asparagine synthase JCM16456_RS10985 PF02357 Transcription termination factor nusG JCM16456_RS10990 PF00854 POT family JCM16456_RS10995 PF00762 Ferrochelatase JCM16456_RS11000 PF05191 Adenylate kinase, active site lid JCM16456_RS11005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS11005 PF00183 Hsp90 protein JCM16456_RS11010 PF00486 Transcriptional regulatory protein, C terminal JCM16456_RS11015 PF17323 Trans-membrane regulatory protein ToxS JCM16456_RS11030 PF12850 Calcineurin-like phosphoesterase superfamily domain JCM16456_RS11035 PF01370 NAD dependent epimerase/dehydratase family JCM16456_RS11035 PF08338 Domain of unknown function (DUF1731) JCM16456_RS11040 PF00106 short chain dehydrogenase JCM16456_RS11045 PF00085 Thioredoxin JCM16456_RS11050 PF13411 MerR HTH family regulatory protein JCM16456_RS11055 PF03120 NAD-dependent DNA ligase OB-fold domain JCM16456_RS11055 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JCM16456_RS11055 PF01653 NAD-dependent DNA ligase adenylation domain JCM16456_RS11055 PF00533 BRCA1 C Terminus (BRCT) domain JCM16456_RS11055 PF12826 Helix-hairpin-helix motif JCM16456_RS11060 PF04354 ZipA, C-terminal FtsZ-binding domain JCM16456_RS11070 PF00291 Pyridoxal-phosphate dependent enzyme JCM16456_RS11075 PF00381 PTS HPr component phosphorylation site JCM16456_RS11080 PF02896 PEP-utilising enzyme, TIM barrel domain JCM16456_RS11080 PF00391 PEP-utilising enzyme, mobile domain JCM16456_RS11080 PF05524 PEP-utilising enzyme, N-terminal JCM16456_RS11085 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCM16456_RS11090 PF01494 FAD binding domain JCM16456_RS11095 PF01938 TRAM domain JCM16456_RS11095 PF00919 Uncharacterized protein family UPF0004 JCM16456_RS11095 PF04055 Radical SAM superfamily JCM16456_RS11100 PF02562 PhoH-like protein JCM16456_RS11105 PF02130 Uncharacterized protein family UPF0054 JCM16456_RS11110 PF03471 Transporter associated domain JCM16456_RS11110 PF00571 CBS domain JCM16456_RS11115 PF00795 Carbon-nitrogen hydrolase JCM16456_RS11125 PF08264 Anticodon-binding domain of tRNA JCM16456_RS11125 PF00133 tRNA synthetases class I (I, L, M and V) JCM16456_RS11125 PF13603 Leucyl-tRNA synthetase, Domain 2 JCM16456_RS11130 PF04390 Lipopolysaccharide-assembly JCM16456_RS11135 PF06144 DNA polymerase III, delta subunit JCM16456_RS11135 PF14840 Processivity clamp loader gamma complex DNA pol III C-term JCM16456_RS11145 PF02590 Predicted SPOUT methyltransferase JCM16456_RS11150 PF00905 Penicillin binding protein transpeptidase domain JCM16456_RS11150 PF03717 Penicillin-binding Protein dimerisation domain JCM16456_RS11155 PF01098 Cell cycle protein JCM16456_RS11160 PF03330 Lytic transglycolase JCM16456_RS11160 PF05036 Sporulation related domain JCM16456_RS11165 PF00768 D-alanyl-D-alanine carboxypeptidase JCM16456_RS11165 PF07943 Penicillin-binding protein 5, C-terminal domain JCM16456_RS11170 PF04359 Protein of unknown function (DUF493) JCM16456_RS11175 PF03099 Biotin/lipoate A/B protein ligase family JCM16456_RS11180 PF04055 Radical SAM superfamily JCM16456_RS11180 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JCM16456_RS11190 PF00464 Serine hydroxymethyltransferase JCM16456_RS11225 PF09383 NIL domain JCM16456_RS11225 PF00005 ABC transporter JCM16456_RS11230 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS11235 PF03180 NLPA lipoprotein JCM16456_RS11240 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) JCM16456_RS11245 PF07348 Syd protein (SUKH-2) JCM16456_RS11250 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JCM16456_RS11250 PF14489 QueF-like protein JCM16456_RS11260 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS11265 PF03641 Possible lysine decarboxylase JCM16456_RS11265 PF11892 Domain of unknown function (DUF3412) JCM16456_RS11265 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JCM16456_RS11270 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JCM16456_RS11270 PF01367 5'-3' exonuclease, C-terminal SAM fold JCM16456_RS11275 PF01728 FtsJ-like methyltransferase JCM16456_RS11275 PF18125 RlmM ferredoxin-like domain JCM16456_RS11290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS11290 PF03466 LysR substrate binding domain JCM16456_RS11295 PF02568 Thiamine biosynthesis protein (ThiI) JCM16456_RS11295 PF02926 THUMP domain JCM16456_RS11300 PF00691 OmpA family JCM16456_RS11300 PF13677 Membrane MotB of proton-channel complex MotA/MotB JCM16456_RS11305 PF01618 MotA/TolQ/ExbB proton channel family JCM16456_RS11310 PF02609 Exonuclease VII small subunit JCM16456_RS11315 PF00348 Polyprenyl synthetase JCM16456_RS11320 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JCM16456_RS11320 PF02779 Transketolase, pyrimidine binding domain JCM16456_RS11320 PF02780 Transketolase, C-terminal domain JCM16456_RS11325 PF00849 RNA pseudouridylate synthase JCM16456_RS11330 PF04287 tRNA pseudouridine synthase C JCM16456_RS11360 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JCM16456_RS11365 PF00444 Ribosomal protein L36 JCM16456_RS11370 PF01197 Ribosomal protein L31 JCM16456_RS11375 PF18389 TrmO C-terminal domain JCM16456_RS11375 PF01980 tRNA-methyltransferase O JCM16456_RS11380 PF03129 Anticodon binding domain JCM16456_RS11380 PF04073 Aminoacyl-tRNA editing domain JCM16456_RS11380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCM16456_RS11390 PF06786 Uncharacterised protein family (UPF0253) JCM16456_RS11400 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JCM16456_RS11400 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCM16456_RS11400 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JCM16456_RS11405 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JCM16456_RS11405 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JCM16456_RS11405 PF02769 AIR synthase related protein, C-terminal domain JCM16456_RS11410 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCM16456_RS11410 PF01464 Transglycosylase SLT domain JCM16456_RS11415 PF14437 MafB19-like deaminase JCM16456_RS11420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS11420 PF03466 LysR substrate binding domain JCM16456_RS11425 PF08240 Alcohol dehydrogenase GroES-like domain JCM16456_RS11425 PF00107 Zinc-binding dehydrogenase JCM16456_RS11430 PF00756 Putative esterase JCM16456_RS11460 PF00226 DnaJ domain JCM16456_RS11460 PF00684 DnaJ central domain JCM16456_RS11460 PF01556 DnaJ C terminal domain JCM16456_RS11465 PF00012 Hsp70 protein JCM16456_RS11475 PF01025 GrpE JCM16456_RS11480 PF01513 ATP-NAD kinase JCM16456_RS11485 PF02463 RecF/RecN/SMC N terminal domain JCM16456_RS11490 PF04355 SmpA / OmlA family JCM16456_RS11495 PF03658 RnfH family Ubiquitin JCM16456_RS11500 PF03364 Polyketide cyclase / dehydrase and lipid transport JCM16456_RS11505 PF01668 SmpB protein JCM16456_RS11515 PF13356 Arm DNA-binding domain JCM16456_RS11515 PF00589 Phage integrase family JCM16456_RS11525 PF07804 HipA-like C-terminal domain JCM16456_RS11525 PF13657 HipA N-terminal domain JCM16456_RS11535 PF00593 TonB dependent receptor JCM16456_RS11535 PF07715 TonB-dependent Receptor Plug Domain JCM16456_RS11540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS11540 PF03466 LysR substrate binding domain JCM16456_RS11545 PF05257 CHAP domain JCM16456_RS11545 PF03738 Glutathionylspermidine synthase preATP-grasp JCM16456_RS11550 PF02743 Cache domain JCM16456_RS11550 PF00672 HAMP domain JCM16456_RS11550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS11585 PF01810 LysE type translocator JCM16456_RS11590 PF01037 Lrp/AsnC ligand binding domain JCM16456_RS11600 PF00367 phosphotransferase system, EIIB JCM16456_RS11600 PF02378 Phosphotransferase system, EIIC JCM16456_RS11600 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCM16456_RS11605 PF00356 Bacterial regulatory proteins, lacI family JCM16456_RS11605 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JCM16456_RS11625 PF03848 Tellurite resistance protein TehB JCM16456_RS11625 PF09313 Domain of unknown function (DUF1971) JCM16456_RS11635 PF00266 Aminotransferase class-V JCM16456_RS11670 PF04542 Sigma-70 region 2 JCM16456_RS11670 PF04539 Sigma-70 region 3 JCM16456_RS11670 PF04545 Sigma-70, region 4 JCM16456_RS11670 PF00140 Sigma-70 factor, region 1.2 JCM16456_RS11700 PF01966 HD domain JCM16456_RS11710 PF01497 Periplasmic binding protein JCM16456_RS11715 PF00472 RF-1 domain JCM16456_RS11730 PF00135 Carboxylesterase family JCM16456_RS11740 PF00892 EamA-like transporter family JCM16456_RS11745 PF01497 Periplasmic binding protein JCM16456_RS11750 PF02558 Ketopantoate reductase PanE/ApbA JCM16456_RS11750 PF08546 Ketopantoate reductase PanE/ApbA C terminal JCM16456_RS11775 PF01839 FG-GAP repeat JCM16456_RS11775 PF18370 Rhamnogalacturonan I lyases beta-sheet domain JCM16456_RS11790 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCM16456_RS11795 PF00795 Carbon-nitrogen hydrolase JCM16456_RS11800 PF00155 Aminotransferase class I and II JCM16456_RS11805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS11805 PF03466 LysR substrate binding domain JCM16456_RS11810 PF00465 Iron-containing alcohol dehydrogenase JCM16456_RS11815 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JCM16456_RS11815 PF00056 lactate/malate dehydrogenase, NAD binding domain JCM16456_RS11820 PF00005 ABC transporter JCM16456_RS11825 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS11830 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS11845 PF00083 Sugar (and other) transporter JCM16456_RS11850 PF12833 Helix-turn-helix domain JCM16456_RS11855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCM16456_RS11855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCM16456_RS11860 PF03466 LysR substrate binding domain JCM16456_RS11860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS11865 PF07286 Protein of unknown function (DUF1445) JCM16456_RS11870 PF03746 LamB/YcsF family JCM16456_RS11875 PF02682 Carboxyltransferase domain, subdomain C and D JCM16456_RS11880 PF02626 Carboxyltransferase domain, subdomain A and B JCM16456_RS11885 PF01566 Natural resistance-associated macrophage protein JCM16456_RS11895 PF03211 Pectate lyase JCM16456_RS11920 PF01514 Secretory protein of YscJ/FliF family JCM16456_RS11930 PF04877 HrpZ JCM16456_RS11945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS11945 PF07730 Histidine kinase JCM16456_RS11945 PF05231 MASE1 JCM16456_RS11950 PF00196 Bacterial regulatory proteins, luxR family JCM16456_RS11950 PF00072 Response regulator receiver domain JCM16456_RS11970 PF00771 FHIPEP family JCM16456_RS11975 PF08448 PAS fold JCM16456_RS11975 PF08447 PAS fold JCM16456_RS11975 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS11975 PF00563 EAL domain JCM16456_RS11975 PF13426 PAS domain JCM16456_RS11975 PF05231 MASE1 JCM16456_RS11985 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCM16456_RS11985 PF18269 T3SS EscN ATPase C-terminal domain JCM16456_RS11985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCM16456_RS12000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JCM16456_RS12005 PF00813 FliP family JCM16456_RS12015 PF01311 Bacterial export proteins, family 1 JCM16456_RS12020 PF01312 FlhB HrpN YscU SpaS Family JCM16456_RS12025 PF04542 Sigma-70 region 2 JCM16456_RS12025 PF08281 Sigma-70, region 4 JCM16456_RS12045 PF03958 Bacterial type II/III secretion system short domain JCM16456_RS12045 PF00263 Bacterial type II and III secretion system protein JCM16456_RS12060 PF07969 Amidohydrolase family JCM16456_RS12065 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JCM16456_RS12070 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase JCM16456_RS12075 PF04223 Citrate lyase, alpha subunit (CitF) JCM16456_RS12080 PF03328 HpcH/HpaI aldolase/citrate lyase family JCM16456_RS12085 PF06857 Malonate decarboxylase delta subunit (MdcD) JCM16456_RS12090 PF08218 Citrate lyase ligase C-terminal domain JCM16456_RS12095 PF03390 2-hydroxycarboxylate transporter family JCM16456_RS12100 PF04277 Oxaloacetate decarboxylase, gamma chain JCM16456_RS12105 PF00364 Biotin-requiring enzyme JCM16456_RS12105 PF02436 Conserved carboxylase domain JCM16456_RS12105 PF00682 HMGL-like JCM16456_RS12110 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit JCM16456_RS12115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS12115 PF17203 Single cache domain 3 JCM16456_RS12120 PF12431 Transcriptional regulator JCM16456_RS12120 PF00072 Response regulator receiver domain JCM16456_RS12130 PF16591 Helical bimodular sensor domain JCM16456_RS12130 PF00672 HAMP domain JCM16456_RS12130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS12135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS12135 PF03466 LysR substrate binding domain JCM16456_RS12140 PF01266 FAD dependent oxidoreductase JCM16456_RS12145 PF01235 Sodium:alanine symporter family JCM16456_RS12150 PF01758 Sodium Bile acid symporter family JCM16456_RS12155 PF01184 GPR1/FUN34/yaaH family JCM16456_RS12165 PF00117 Glutamine amidotransferase class-I JCM16456_RS12165 PF00958 GMP synthase C terminal domain JCM16456_RS12165 PF02540 NAD synthase JCM16456_RS12170 PF00571 CBS domain JCM16456_RS12170 PF00478 IMP dehydrogenase / GMP reductase domain JCM16456_RS12175 PF02601 Exonuclease VII, large subunit JCM16456_RS12175 PF13742 OB-fold nucleic acid binding domain JCM16456_RS12185 PF01926 50S ribosome-binding GTPase JCM16456_RS12185 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JCM16456_RS12190 PF13360 PQQ-like domain JCM16456_RS12195 PF09976 Tetratricopeptide repeat-like domain JCM16456_RS12200 PF03129 Anticodon binding domain JCM16456_RS12200 PF13393 Histidyl-tRNA synthetase JCM16456_RS12205 PF04551 GcpE protein JCM16456_RS12210 PF13464 Domain of unknown function (DUF4115) JCM16456_RS12215 PF04055 Radical SAM superfamily JCM16456_RS12220 PF00334 Nucleoside diphosphate kinase JCM16456_RS12225 PF12404 Peptidase JCM16456_RS12225 PF00883 Cytosol aminopeptidase family, catalytic domain JCM16456_RS12230 PF04384 Iron-sulphur cluster assembly JCM16456_RS12235 PF00111 2Fe-2S iron-sulfur cluster binding domain JCM16456_RS12240 PF00012 Hsp70 protein JCM16456_RS12245 PF07743 HSCB C-terminal oligomerisation domain JCM16456_RS12245 PF00226 DnaJ domain JCM16456_RS12250 PF01521 Iron-sulphur cluster biosynthesis JCM16456_RS12255 PF01592 NifU-like N terminal domain JCM16456_RS12260 PF00266 Aminotransferase class-V JCM16456_RS12265 PF02082 Transcriptional regulator JCM16456_RS12270 PF00588 SpoU rRNA Methylase family JCM16456_RS12275 PF00459 Inositol monophosphatase family JCM16456_RS12280 PF00857 Isochorismatase family JCM16456_RS12285 PF07549 SecD/SecF GG Motif JCM16456_RS12285 PF02355 Protein export membrane protein JCM16456_RS12290 PF13721 SecD export protein N-terminal TM region JCM16456_RS12290 PF07549 SecD/SecF GG Motif JCM16456_RS12290 PF02355 Protein export membrane protein JCM16456_RS12295 PF02699 Preprotein translocase subunit JCM16456_RS12300 PF01702 Queuine tRNA-ribosyltransferase JCM16456_RS12305 PF02547 Queuosine biosynthesis protein JCM16456_RS12310 PF00571 CBS domain JCM16456_RS12315 PF00463 Isocitrate lyase family JCM16456_RS12320 PF01274 Malate synthase JCM16456_RS12325 PF03466 LysR substrate binding domain JCM16456_RS12325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS12330 PF00578 AhpC/TSA family JCM16456_RS12330 PF10417 C-terminal domain of 1-Cys peroxiredoxin JCM16456_RS12335 PF03932 CutC family JCM16456_RS12340 PF01895 PhoU domain JCM16456_RS12345 PF00005 ABC transporter JCM16456_RS12350 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS12355 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS12360 PF17941 Polyphosphate kinase C-terminal domain 1 JCM16456_RS12360 PF13090 Polyphosphate kinase C-terminal domain 2 JCM16456_RS12360 PF13089 Polyphosphate kinase N-terminal domain JCM16456_RS12360 PF02503 Polyphosphate kinase middle domain JCM16456_RS12365 PF02541 Ppx/GppA phosphatase family JCM16456_RS12370 PF12849 PBP superfamily domain JCM16456_RS12375 PF11808 Phosphate regulon sensor protein PhoR JCM16456_RS12375 PF00989 PAS fold JCM16456_RS12375 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS12375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS12380 PF00486 Transcriptional regulatory protein, C terminal JCM16456_RS12380 PF00072 Response regulator receiver domain JCM16456_RS12385 PF04381 Putative exonuclease, RdgC JCM16456_RS12390 PF01136 Peptidase family U32 JCM16456_RS12390 PF16325 Peptidase family U32 C-terminal domain JCM16456_RS12395 PF00037 4Fe-4S binding domain JCM16456_RS12400 PF00881 Nitroreductase family JCM16456_RS12445 PF17871 AAA lid domain JCM16456_RS12445 PF02861 Clp amino terminal domain, pathogenicity island component JCM16456_RS12445 PF00004 ATPase family associated with various cellular activities (AAA) JCM16456_RS12445 PF10431 C-terminal, D2-small domain, of ClpB protein JCM16456_RS12445 PF07724 AAA domain (Cdc48 subfamily) JCM16456_RS12450 PF02578 Multi-copper polyphenol oxidoreductase laccase JCM16456_RS12455 PF01479 S4 domain JCM16456_RS12455 PF00849 RNA pseudouridylate synthase JCM16456_RS12460 PF13525 Outer membrane lipoprotein JCM16456_RS12465 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JCM16456_RS12470 PF00800 Prephenate dehydratase JCM16456_RS12470 PF01817 Chorismate mutase type II JCM16456_RS12475 PF13416 Bacterial extracellular solute-binding protein JCM16456_RS12480 PF00563 EAL domain JCM16456_RS12480 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS12485 PF01931 Protein of unknown function DUF84 JCM16456_RS12490 PF01371 Trp repressor protein JCM16456_RS12495 PF01464 Transglycosylase SLT domain JCM16456_RS12495 PF14718 Soluble lytic murein transglycosylase L domain JCM16456_RS12500 PF12848 ABC transporter JCM16456_RS12500 PF00005 ABC transporter JCM16456_RS12505 PF07238 PilZ domain JCM16456_RS12510 PF01817 Chorismate mutase type II JCM16456_RS12510 PF02153 Prephenate dehydrogenase JCM16456_RS12515 PF00793 DAHP synthetase I family JCM16456_RS12520 PF07694 5TMR of 5TMR-LYT JCM16456_RS12520 PF06580 Histidine kinase JCM16456_RS12525 PF04397 LytTr DNA-binding domain JCM16456_RS12525 PF00072 Response regulator receiver domain JCM16456_RS12530 PF00933 Glycosyl hydrolase family 3 N terminal domain JCM16456_RS12535 PF03702 Anhydro-N-acetylmuramic acid kinase JCM16456_RS12540 PF13580 SIS domain JCM16456_RS12545 PF00999 Sodium/hydrogen exchanger family JCM16456_RS12555 PF02554 Carbon starvation protein CstA JCM16456_RS12560 PF02401 LytB protein JCM16456_RS12565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCM16456_RS12570 PF01252 Signal peptidase (SPase) II JCM16456_RS12575 PF08264 Anticodon-binding domain of tRNA JCM16456_RS12575 PF06827 Zinc finger found in FPG and IleRS JCM16456_RS12575 PF00133 tRNA synthetases class I (I, L, M and V) JCM16456_RS12580 PF06574 FAD synthetase JCM16456_RS12580 PF01687 Riboflavin kinase JCM16456_RS12585 PF03023 Lipid II flippase MurJ JCM16456_RS12590 PF01649 Ribosomal protein S20 JCM16456_RS12595 PF01022 Bacterial regulatory protein, arsR family JCM16456_RS12600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS12600 PF03466 LysR substrate binding domain JCM16456_RS12605 PF00303 Thymidylate synthase JCM16456_RS12610 PF01790 Prolipoprotein diacylglyceryl transferase JCM16456_RS12615 PF01925 Sulfite exporter TauE/SafE JCM16456_RS12620 PF02896 PEP-utilising enzyme, TIM barrel domain JCM16456_RS12620 PF00391 PEP-utilising enzyme, mobile domain JCM16456_RS12620 PF01590 GAF domain JCM16456_RS12620 PF05524 PEP-utilising enzyme, N-terminal JCM16456_RS12625 PF00293 NUDIX domain JCM16456_RS12630 PF02976 DNA mismatch repair enzyme MutH JCM16456_RS12640 PF00248 Aldo/keto reductase family JCM16456_RS12650 PF02954 Bacterial regulatory protein, Fis family JCM16456_RS12650 PF00072 Response regulator receiver domain JCM16456_RS12650 PF00158 Sigma-54 interaction domain JCM16456_RS12655 PF01336 OB-fold nucleic acid binding domain JCM16456_RS12655 PF00152 tRNA synthetases class II (D, K and N) JCM16456_RS12660 PF00472 RF-1 domain JCM16456_RS12660 PF03462 PCRF domain JCM16456_RS12665 PF05525 Branched-chain amino acid transport protein JCM16456_RS12670 PF05175 Methyltransferase small domain JCM16456_RS12675 PF00271 Helicase conserved C-terminal domain JCM16456_RS12675 PF00270 DEAD/DEAH box helicase JCM16456_RS12680 PF00009 Elongation factor Tu GTP binding domain JCM16456_RS12680 PF03144 Elongation factor Tu domain 2 JCM16456_RS12680 PF16658 Class II release factor RF3, C-terminal domain JCM16456_RS12685 PF03707 Bacterial signalling protein N terminal repeat JCM16456_RS12685 PF00563 EAL domain JCM16456_RS12685 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS12690 PF00583 Acetyltransferase (GNAT) family JCM16456_RS12700 PF13508 Acetyltransferase (GNAT) domain JCM16456_RS12705 PF02036 SCP-2 sterol transfer family JCM16456_RS12710 PF03707 Bacterial signalling protein N terminal repeat JCM16456_RS12710 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS12710 PF00563 EAL domain JCM16456_RS12715 PF01136 Peptidase family U32 JCM16456_RS12720 PF01136 Peptidase family U32 JCM16456_RS12735 PF07719 Tetratricopeptide repeat JCM16456_RS12735 PF13181 Tetratricopeptide repeat JCM16456_RS12740 PF01138 3' exoribonuclease family, domain 1 JCM16456_RS12740 PF00013 KH domain JCM16456_RS12740 PF03725 3' exoribonuclease family, domain 2 JCM16456_RS12740 PF00575 S1 RNA binding domain JCM16456_RS12740 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JCM16456_RS12745 PF00312 Ribosomal protein S15 JCM16456_RS12750 PF09157 Pseudouridine synthase II TruB, C-terminal JCM16456_RS12750 PF01509 TruB family pseudouridylate synthase (N terminal domain) JCM16456_RS12750 PF16198 tRNA pseudouridylate synthase B C-terminal domain JCM16456_RS12755 PF02033 Ribosome-binding factor A JCM16456_RS12760 PF11987 Translation-initiation factor 2 JCM16456_RS12760 PF04760 Translation initiation factor IF-2, N-terminal region JCM16456_RS12760 PF08364 Bacterial translation initiation factor IF-2 associated region JCM16456_RS12760 PF00009 Elongation factor Tu GTP binding domain JCM16456_RS12765 PF08529 NusA N-terminal domain JCM16456_RS12765 PF00575 S1 RNA binding domain JCM16456_RS12765 PF13184 NusA-like KH domain JCM16456_RS12770 PF17384 RimP C-terminal SH3 domain JCM16456_RS12770 PF02576 RimP N-terminal domain JCM16456_RS12785 PF03840 Preprotein translocase SecG subunit JCM16456_RS12790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCM16456_RS12790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCM16456_RS12790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCM16456_RS12790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCM16456_RS12795 PF00809 Pterin binding enzyme JCM16456_RS12800 PF01434 Peptidase family M41 JCM16456_RS12800 PF06480 FtsH Extracellular JCM16456_RS12800 PF00004 ATPase family associated with various cellular activities (AAA) JCM16456_RS12800 PF17862 AAA+ lid domain JCM16456_RS12805 PF01728 FtsJ-like methyltransferase JCM16456_RS12810 PF01985 CRS1 / YhbY (CRM) domain JCM16456_RS12815 PF01272 Transcription elongation factor, GreA/GreB, C-term JCM16456_RS12815 PF03449 Transcription elongation factor, N-terminal JCM16456_RS12820 PF13609 Gram-negative porin JCM16456_RS12825 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JCM16456_RS12835 PF00579 tRNA synthetases class I (W and Y) JCM16456_RS12835 PF01479 S4 domain JCM16456_RS12845 PF01521 Iron-sulphur cluster biosynthesis JCM16456_RS12850 PF00202 Aminotransferase class-III JCM16456_RS12855 PF01594 AI-2E family transporter JCM16456_RS12860 PF08468 Methyltransferase small domain N-terminal JCM16456_RS12860 PF05175 Methyltransferase small domain JCM16456_RS12865 PF00909 Ammonium Transporter Family JCM16456_RS12870 PF00543 Nitrogen regulatory protein P-II JCM16456_RS12875 PF06062 Uncharacterised protein family (UPF0231) JCM16456_RS12880 PF00330 Aconitase family (aconitate hydratase) JCM16456_RS12880 PF11791 Aconitate B N-terminal domain JCM16456_RS12880 PF06434 Aconitate hydratase 2 N-terminus JCM16456_RS12885 PF01734 Patatin-like phospholipase JCM16456_RS12890 PF00912 Transglycosylase JCM16456_RS12890 PF00905 Penicillin binding protein transpeptidase domain JCM16456_RS12890 PF14814 Bifunctional transglycosylase second domain JCM16456_RS12895 PF00270 DEAD/DEAH box helicase JCM16456_RS12895 PF04408 Helicase associated domain (HA2) JCM16456_RS12895 PF08482 ATP-dependent helicase C-terminal JCM16456_RS12895 PF00271 Helicase conserved C-terminal domain JCM16456_RS12900 PF17746 SfsA N-terminal OB domain JCM16456_RS12900 PF03749 Sugar fermentation stimulation protein RE domain JCM16456_RS12905 PF01258 Prokaryotic dksA/traR C4-type zinc finger JCM16456_RS12910 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCM16456_RS12915 PF12627 Probable RNA and SrmB- binding site of polymerase A JCM16456_RS12915 PF01743 Poly A polymerase head domain JCM16456_RS12915 PF12626 Polymerase A arginine-rich C-terminus JCM16456_RS12920 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JCM16456_RS12925 PF02548 Ketopantoate hydroxymethyltransferase JCM16456_RS12930 PF02569 Pantoate-beta-alanine ligase JCM16456_RS12935 PF01061 ABC-2 type transporter JCM16456_RS12940 PF00005 ABC transporter JCM16456_RS12945 PF00484 Carbonic anhydrase JCM16456_RS12950 PF00156 Phosphoribosyl transferase domain JCM16456_RS12955 PF00440 Bacterial regulatory proteins, tetR family JCM16456_RS12960 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCM16456_RS12960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCM16456_RS12965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCM16456_RS12965 PF00364 Biotin-requiring enzyme JCM16456_RS12965 PF02817 e3 binding domain JCM16456_RS12970 PF00456 Transketolase, thiamine diphosphate binding domain JCM16456_RS12970 PF17831 Pyruvate dehydrogenase E1 component middle domain JCM16456_RS12975 PF07729 FCD domain JCM16456_RS12975 PF00392 Bacterial regulatory proteins, gntR family JCM16456_RS12980 PF01368 DHH family JCM16456_RS12980 PF17768 RecJ OB domain JCM16456_RS12980 PF02272 DHHA1 domain JCM16456_RS12985 PF13098 Thioredoxin-like domain JCM16456_RS12985 PF10411 Disulfide bond isomerase protein N-terminus JCM16456_RS12990 PF00589 Phage integrase family JCM16456_RS12990 PF02899 Phage integrase, N-terminal SAM-like domain JCM16456_RS12995 PF00258 Flavodoxin JCM16456_RS13000 PF01510 N-acetylmuramoyl-L-alanine amidase JCM16456_RS13005 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JCM16456_RS13005 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JCM16456_RS13010 PF07963 Prokaryotic N-terminal methylation motif JCM16456_RS13010 PF00114 Pilin (bacterial filament) JCM16456_RS13015 PF00437 Type II/IV secretion system protein JCM16456_RS13015 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JCM16456_RS13020 PF00482 Type II secretion system (T2SS), protein F JCM16456_RS13025 PF01478 Type IV leader peptidase family JCM16456_RS13025 PF06750 Bacterial Peptidase A24 N-terminal domain JCM16456_RS13030 PF01121 Dephospho-CoA kinase JCM16456_RS13035 PF07072 Cell division protein JCM16456_RS13040 PF03884 DNA gyrase inhibitor YacG JCM16456_RS13045 PF04542 Sigma-70 region 2 JCM16456_RS13045 PF08281 Sigma-70, region 4 JCM16456_RS13060 PF05114 Protein of unknown function (DUF692) JCM16456_RS13075 PF03989 DNA gyrase C-terminal domain, beta-propeller JCM16456_RS13075 PF00521 DNA gyrase/topoisomerase IV, subunit A JCM16456_RS13080 PF00204 DNA gyrase B JCM16456_RS13080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS13080 PF01751 Toprim domain JCM16456_RS13080 PF00986 DNA gyrase B subunit, carboxyl terminus JCM16456_RS13085 PF05728 Uncharacterised protein family (UPF0227) JCM16456_RS13090 PF00149 Calcineurin-like phosphoesterase JCM16456_RS13095 PF06853 Protein of unknown function (DUF1249) JCM16456_RS13100 PF00293 NUDIX domain JCM16456_RS13105 PF02321 Outer membrane efflux protein JCM16456_RS13110 PF01467 Cytidylyltransferase-like JCM16456_RS13110 PF00294 pfkB family carbohydrate kinase JCM16456_RS13115 PF03710 Glutamate-ammonia ligase adenylyltransferase JCM16456_RS13115 PF08335 GlnD PII-uridylyltransferase JCM16456_RS13120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM16456_RS13120 PF00672 HAMP domain JCM16456_RS13125 PF01928 CYTH domain JCM16456_RS13130 PF01865 Protein of unknown function DUF47 JCM16456_RS13135 PF01384 Phosphate transporter family JCM16456_RS13140 PF08239 Bacterial SH3 domain JCM16456_RS13145 PF16537 Type II secretion system protein B JCM16456_RS13150 PF01471 Putative peptidoglycan binding domain JCM16456_RS13150 PF13401 AAA domain JCM16456_RS13155 PF01743 Poly A polymerase head domain JCM16456_RS13155 PF01966 HD domain JCM16456_RS13155 PF12627 Probable RNA and SrmB- binding site of polymerase A JCM16456_RS13160 PF00113 Enolase, C-terminal TIM barrel domain JCM16456_RS13160 PF03952 Enolase, N-terminal domain JCM16456_RS13165 PF00117 Glutamine amidotransferase class-I JCM16456_RS13165 PF06418 CTP synthase N-terminus JCM16456_RS13170 PF03819 MazG nucleotide pyrophosphohydrolase domain JCM16456_RS13175 PF13291 ACT domain JCM16456_RS13175 PF04607 Region found in RelA / SpoT proteins JCM16456_RS13175 PF02824 TGS domain JCM16456_RS13180 PF05958 tRNA (Uracil-5-)-methyltransferase JCM16456_RS13180 PF01938 TRAM domain JCM16456_RS13185 PF00072 Response regulator receiver domain JCM16456_RS13185 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JCM16456_RS13185 PF01627 Hpt domain JCM16456_RS13185 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS13185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS13185 PF00672 HAMP domain JCM16456_RS13190 PF01648 4'-phosphopantetheinyl transferase superfamily JCM16456_RS13195 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JCM16456_RS13200 PF02565 Recombination protein O C terminal JCM16456_RS13200 PF11967 Recombination protein O N terminal JCM16456_RS13205 PF01926 50S ribosome-binding GTPase JCM16456_RS13205 PF07650 KH domain JCM16456_RS13210 PF14622 Ribonuclease-III-like JCM16456_RS13210 PF00035 Double-stranded RNA binding motif JCM16456_RS13215 PF10502 Signal peptidase, peptidase S26 JCM16456_RS13220 PF06421 GTP-binding protein LepA C-terminus JCM16456_RS13220 PF03144 Elongation factor Tu domain 2 JCM16456_RS13220 PF00679 Elongation factor G C-terminus JCM16456_RS13220 PF00009 Elongation factor Tu GTP binding domain JCM16456_RS13230 PF17188 MucB/RseB C-terminal domain JCM16456_RS13230 PF03888 MucB/RseB N-terminal domain JCM16456_RS13235 PF03873 Anti sigma-E protein RseA, C-terminal domain JCM16456_RS13235 PF03872 Anti sigma-E protein RseA, N-terminal domain JCM16456_RS13240 PF04542 Sigma-70 region 2 JCM16456_RS13240 PF08281 Sigma-70, region 4 JCM16456_RS13245 PF02910 Fumarate reductase flavoprotein C-term JCM16456_RS13245 PF00890 FAD binding domain JCM16456_RS13255 PF03937 Flavinator of succinate dehydrogenase JCM16456_RS13275 PF01494 FAD binding domain JCM16456_RS13280 PF01494 FAD binding domain JCM16456_RS13285 PF03695 Uncharacterised protein family (UPF0149) JCM16456_RS13290 PF05164 Cell division protein ZapA JCM16456_RS13300 PF01812 5-formyltetrahydrofolate cyclo-ligase family JCM16456_RS13305 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JCM16456_RS13310 PF01842 ACT domain JCM16456_RS13310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCM16456_RS13310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCM16456_RS13315 PF10369 Small subunit of acetolactate synthase JCM16456_RS13320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCM16456_RS13320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCM16456_RS13320 PF00205 Thiamine pyrophosphate enzyme, central domain JCM16456_RS13325 PF00501 AMP-binding enzyme JCM16456_RS13330 PF03466 LysR substrate binding domain JCM16456_RS13330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS13340 PF01569 PAP2 superfamily JCM16456_RS13345 PF08502 LeuA allosteric (dimerisation) domain JCM16456_RS13345 PF00682 HMGL-like JCM16456_RS13350 PF00180 Isocitrate/isopropylmalate dehydrogenase JCM16456_RS13355 PF00330 Aconitase family (aconitate hydratase) JCM16456_RS13360 PF00694 Aconitase C-terminal domain JCM16456_RS13400 PF00072 Response regulator receiver domain JCM16456_RS13410 PF00535 Glycosyl transferase family 2 JCM16456_RS13425 PF00465 Iron-containing alcohol dehydrogenase JCM16456_RS13430 PF03739 Lipopolysaccharide export system permease LptF/LptG JCM16456_RS13435 PF03739 Lipopolysaccharide export system permease LptF/LptG JCM16456_RS13440 PF00883 Cytosol aminopeptidase family, catalytic domain JCM16456_RS13440 PF02789 Cytosol aminopeptidase family, N-terminal domain JCM16456_RS13450 PF10458 Valyl tRNA synthetase tRNA binding arm JCM16456_RS13450 PF08264 Anticodon-binding domain of tRNA JCM16456_RS13450 PF00133 tRNA synthetases class I (I, L, M and V) JCM16456_RS13455 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCM16456_RS13455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCM16456_RS13460 PF00849 RNA pseudouridylate synthase JCM16456_RS13470 PF18337 RapA N-terminal Tudor like domain JCM16456_RS13470 PF00271 Helicase conserved C-terminal domain JCM16456_RS13470 PF00176 SNF2 family N-terminal domain JCM16456_RS13470 PF18339 RapA N-terminal Tudor like domain 1 JCM16456_RS13470 PF12137 RNA polymerase recycling family C-terminal JCM16456_RS13475 PF02562 PhoH-like protein JCM16456_RS13475 PF13638 PIN domain JCM16456_RS13480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JCM16456_RS13480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JCM16456_RS13485 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JCM16456_RS13485 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JCM16456_RS13490 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain JCM16456_RS13490 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain JCM16456_RS13495 PF01042 Endoribonuclease L-PSP JCM16456_RS13500 PF01553 Acyltransferase JCM16456_RS13505 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCM16456_RS13510 PF01722 BolA-like protein JCM16456_RS13520 PF05494 MlaC protein JCM16456_RS13525 PF02470 MlaD protein JCM16456_RS13530 PF02405 Permease MlaE JCM16456_RS13535 PF00005 ABC transporter JCM16456_RS13540 PF01699 Sodium/calcium exchanger protein JCM16456_RS13545 PF01380 SIS domain JCM16456_RS13545 PF00571 CBS domain JCM16456_RS13560 PF03968 OstA-like protein JCM16456_RS13565 PF00005 ABC transporter JCM16456_RS13565 PF12399 Branched-chain amino acid ATP-binding cassette transporter JCM16456_RS13570 PF04963 Sigma-54 factor, core binding domain JCM16456_RS13570 PF00309 Sigma-54 factor, Activator interacting domain (AID) JCM16456_RS13570 PF04552 Sigma-54, DNA binding domain JCM16456_RS13575 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JCM16456_RS13580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCM16456_RS13585 PF03668 P-loop ATPase protein family JCM16456_RS13590 PF00381 PTS HPr component phosphorylation site JCM16456_RS13595 PF00571 CBS domain JCM16456_RS13595 PF01769 Divalent cation transporter JCM16456_RS13595 PF03448 MgtE intracellular N domain JCM16456_RS13600 PF01523 Putative modulator of DNA gyrase JCM16456_RS13605 PF04751 Protein of unknown function (DUF615) JCM16456_RS13610 PF00005 ABC transporter JCM16456_RS13615 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS13625 PF02441 Flavoprotein JCM16456_RS13630 PF01225 Mur ligase family, catalytic domain JCM16456_RS13630 PF02875 Mur ligase family, glutamate ligase domain JCM16456_RS13630 PF08245 Mur ligase middle domain JCM16456_RS13635 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JCM16456_RS13645 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like JCM16456_RS13650 PF04357 TamB, inner membrane protein subunit of TAM complex JCM16456_RS13655 PF17243 POTRA domain TamA domain 1 JCM16456_RS13655 PF07244 Surface antigen variable number repeat JCM16456_RS13655 PF01103 Surface antigen JCM16456_RS13660 PF01625 Peptide methionine sulfoxide reductase JCM16456_RS13670 PF00005 ABC transporter JCM16456_RS13695 PF03600 Citrate transporter JCM16456_RS13695 PF02080 TrkA-C domain JCM16456_RS13700 PF00009 Elongation factor Tu GTP binding domain JCM16456_RS13705 PF01507 Phosphoadenosine phosphosulfate reductase family JCM16456_RS13710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCM16456_RS13710 PF10414 Sirohaem synthase dimerisation region JCM16456_RS13710 PF14824 Sirohaem biosynthesis protein central JCM16456_RS13715 PF02872 5'-nucleotidase, C-terminal domain JCM16456_RS13715 PF00149 Calcineurin-like phosphoesterase JCM16456_RS13725 PF13673 Acetyltransferase (GNAT) domain JCM16456_RS13735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCM16456_RS13735 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JCM16456_RS13740 PF01196 Ribosomal protein L17 JCM16456_RS13745 PF01000 RNA polymerase Rpb3/RpoA insert domain JCM16456_RS13745 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JCM16456_RS13745 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JCM16456_RS13750 PF01479 S4 domain JCM16456_RS13750 PF00163 Ribosomal protein S4/S9 N-terminal domain JCM16456_RS13755 PF00411 Ribosomal protein S11 JCM16456_RS13760 PF00416 Ribosomal protein S13/S18 JCM16456_RS13765 PF00444 Ribosomal protein L36 JCM16456_RS13770 PF00344 SecY translocase JCM16456_RS13775 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JCM16456_RS13780 PF00327 Ribosomal protein L30p/L7e JCM16456_RS13785 PF00333 Ribosomal protein S5, N-terminal domain JCM16456_RS13785 PF03719 Ribosomal protein S5, C-terminal domain JCM16456_RS13790 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JCM16456_RS13795 PF00347 Ribosomal protein L6 JCM16456_RS13800 PF00410 Ribosomal protein S8 JCM16456_RS13805 PF00253 Ribosomal protein S14p/S29e JCM16456_RS13810 PF00281 Ribosomal protein L5 JCM16456_RS13810 PF00673 ribosomal L5P family C-terminus JCM16456_RS13815 PF00467 KOW motif JCM16456_RS13815 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JCM16456_RS13820 PF00238 Ribosomal protein L14p/L23e JCM16456_RS13825 PF00366 Ribosomal protein S17 JCM16456_RS13830 PF00831 Ribosomal L29 protein JCM16456_RS13835 PF00252 Ribosomal protein L16p/L10e JCM16456_RS13840 PF07650 KH domain JCM16456_RS13840 PF00189 Ribosomal protein S3, C-terminal domain JCM16456_RS13845 PF00237 Ribosomal protein L22p/L17e JCM16456_RS13850 PF00203 Ribosomal protein S19 JCM16456_RS13855 PF00181 Ribosomal Proteins L2, RNA binding domain JCM16456_RS13855 PF03947 Ribosomal Proteins L2, C-terminal domain JCM16456_RS13860 PF00276 Ribosomal protein L23 JCM16456_RS13865 PF00573 Ribosomal protein L4/L1 family JCM16456_RS13870 PF00297 Ribosomal protein L3 JCM16456_RS13875 PF00338 Ribosomal protein S10p/S20e JCM16456_RS13880 PF08032 RNA 2'-O ribose methyltransferase substrate binding JCM16456_RS13880 PF00588 SpoU rRNA Methylase family JCM16456_RS13885 PF00575 S1 RNA binding domain JCM16456_RS13885 PF00773 RNB domain JCM16456_RS13885 PF17876 Cold shock domain JCM16456_RS13885 PF08461 Ribonuclease R winged-helix domain JCM16456_RS13885 PF08206 Ribonuclease B OB domain JCM16456_RS13890 PF01979 Amidohydrolase family JCM16456_RS13895 PF00664 ABC transporter transmembrane region JCM16456_RS13895 PF00005 ABC transporter JCM16456_RS13900 PF00664 ABC transporter transmembrane region JCM16456_RS13900 PF00005 ABC transporter JCM16456_RS13905 PF08238 Sel1 repeat JCM16456_RS13910 PF00709 Adenylosuccinate synthetase JCM16456_RS13915 PF01112 Asparaginase JCM16456_RS13920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCM16456_RS13930 PF02254 TrkA-N domain JCM16456_RS13930 PF00999 Sodium/hydrogen exchanger family JCM16456_RS13935 PF02525 Flavodoxin-like fold JCM16456_RS13940 PF00005 ABC transporter JCM16456_RS13940 PF12848 ABC transporter JCM16456_RS13950 PF00561 alpha/beta hydrolase fold JCM16456_RS13955 PF06794 Uncharacterised protein family (UPF0270) JCM16456_RS13960 PF00485 Phosphoribulokinase / Uridine kinase family JCM16456_RS13965 PF00027 Cyclic nucleotide-binding domain JCM16456_RS13965 PF13545 Crp-like helix-turn-helix domain JCM16456_RS13975 PF00171 Aldehyde dehydrogenase family JCM16456_RS13980 PF04958 Arginine N-succinyltransferase beta subunit JCM16456_RS13985 PF00202 Aminotransferase class-III JCM16456_RS13990 PF00117 Glutamine amidotransferase class-I JCM16456_RS14000 PF00579 tRNA synthetases class I (W and Y) JCM16456_RS14005 PF13419 Haloacid dehalogenase-like hydrolase JCM16456_RS14010 PF00834 Ribulose-phosphate 3 epimerase family JCM16456_RS14015 PF02086 D12 class N6 adenine-specific DNA methyltransferase JCM16456_RS14025 PF01761 3-dehydroquinate synthase JCM16456_RS14030 PF01202 Shikimate kinase JCM16456_RS14035 PF00263 Bacterial type II and III secretion system protein JCM16456_RS14035 PF03958 Bacterial type II/III secretion system short domain JCM16456_RS14040 PF04351 Pilus assembly protein, PilP JCM16456_RS14060 PF00905 Penicillin binding protein transpeptidase domain JCM16456_RS14060 PF17092 Penicillin-binding protein OB-like domain JCM16456_RS14060 PF00912 Transglycosylase JCM16456_RS14065 PF03466 LysR substrate binding domain JCM16456_RS14065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS14070 PF00462 Glutaredoxin JCM16456_RS14070 PF08534 Redoxin JCM16456_RS14075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCM16456_RS14075 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCM16456_RS14085 PF14698 Argininosuccinate lyase C-terminal JCM16456_RS14085 PF00583 Acetyltransferase (GNAT) family JCM16456_RS14085 PF00206 Lyase JCM16456_RS14090 PF00764 Arginosuccinate synthase JCM16456_RS14095 PF00696 Amino acid kinase family JCM16456_RS14100 PF01118 Semialdehyde dehydrogenase, NAD binding domain JCM16456_RS14100 PF02774 Semialdehyde dehydrogenase, dimerisation domain JCM16456_RS14105 PF01546 Peptidase family M20/M25/M40 JCM16456_RS14105 PF07687 Peptidase dimerisation domain JCM16456_RS14110 PF00311 Phosphoenolpyruvate carboxylase JCM16456_RS14120 PF00132 Bacterial transferase hexapeptide (six repeats) JCM16456_RS14120 PF06426 Serine acetyltransferase, N-terminal JCM16456_RS14125 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JCM16456_RS14125 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JCM16456_RS14130 PF02556 Preprotein translocase subunit SecB JCM16456_RS14135 PF00581 Rhodanese-like domain JCM16456_RS14140 PF00152 tRNA synthetases class II (D, K and N) JCM16456_RS14145 PF00890 FAD binding domain JCM16456_RS14145 PF02910 Fumarate reductase flavoprotein C-term JCM16456_RS14150 PF13085 2Fe-2S iron-sulfur cluster binding domain JCM16456_RS14150 PF13183 4Fe-4S dicluster domain JCM16456_RS14155 PF02300 Fumarate reductase subunit C JCM16456_RS14160 PF02313 Fumarate reductase subunit D JCM16456_RS14165 PF00939 Sodium:sulfate symporter transmembrane region JCM16456_RS14170 PF09285 Elongation factor P, C-terminal JCM16456_RS14170 PF01132 Elongation factor P (EF-P) OB domain JCM16456_RS14170 PF08207 Elongation factor P (EF-P) KOW-like domain JCM16456_RS14175 PF04055 Radical SAM superfamily JCM16456_RS14180 PF02308 MgtC family JCM16456_RS14185 PF00005 ABC transporter JCM16456_RS14195 PF00118 TCP-1/cpn60 chaperonin family JCM16456_RS14200 PF00166 Chaperonin 10 Kd subunit JCM16456_RS14225 PF00121 Triosephosphate isomerase JCM16456_RS14230 PF01554 MatE JCM16456_RS14235 PF03737 Aldolase/RraA JCM16456_RS14240 PF01040 UbiA prenyltransferase family JCM16456_RS14245 PF10431 C-terminal, D2-small domain, of ClpB protein JCM16456_RS14245 PF00004 ATPase family associated with various cellular activities (AAA) JCM16456_RS14245 PF07724 AAA domain (Cdc48 subfamily) JCM16456_RS14250 PF00227 Proteasome subunit JCM16456_RS14260 PF00356 Bacterial regulatory proteins, lacI family JCM16456_RS14265 PF00270 DEAD/DEAH box helicase JCM16456_RS14265 PF00271 Helicase conserved C-terminal domain JCM16456_RS14265 PF17764 3′ DNA-binding domain (3′BD) JCM16456_RS14265 PF18074 Primosomal protein N C-terminal domain JCM16456_RS14265 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JCM16456_RS14270 PF01197 Ribosomal protein L31 JCM16456_RS14275 PF03949 Malic enzyme, NAD binding domain JCM16456_RS14275 PF00390 Malic enzyme, N-terminal domain JCM16456_RS14280 PF01340 Met Apo-repressor, MetJ JCM16456_RS14285 PF01053 Cys/Met metabolism PLP-dependent enzyme JCM16456_RS14290 PF00696 Amino acid kinase family JCM16456_RS14290 PF03447 Homoserine dehydrogenase, NAD binding domain JCM16456_RS14290 PF00742 Homoserine dehydrogenase JCM16456_RS14295 PF02219 Methylenetetrahydrofolate reductase JCM16456_RS14300 PF06005 Cell division protein ZapB JCM16456_RS14305 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JCM16456_RS14310 PF00365 Phosphofructokinase JCM16456_RS14315 PF16916 Dimerisation domain of Zinc Transporter JCM16456_RS14315 PF01545 Cation efflux family JCM16456_RS14325 PF00486 Transcriptional regulatory protein, C terminal JCM16456_RS14325 PF00072 Response regulator receiver domain JCM16456_RS14330 PF00672 HAMP domain JCM16456_RS14330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS14330 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS14330 PF16527 Two-component sensor protein CpxA, periplasmic domain JCM16456_RS14335 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JCM16456_RS14335 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JCM16456_RS14340 PF00588 SpoU rRNA Methylase family JCM16456_RS14345 PF04186 FxsA cytoplasmic membrane protein JCM16456_RS14350 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS14355 PF10415 Fumarase C C-terminus JCM16456_RS14355 PF00206 Lyase JCM16456_RS14360 PF02683 Cytochrome C biogenesis protein transmembrane region JCM16456_RS14360 PF11412 Disulphide bond corrector protein DsbC JCM16456_RS14365 PF00196 Bacterial regulatory proteins, luxR family JCM16456_RS14365 PF00072 Response regulator receiver domain JCM16456_RS14370 PF00999 Sodium/hydrogen exchanger family JCM16456_RS14370 PF02080 TrkA-C domain JCM16456_RS14370 PF03471 Transporter associated domain JCM16456_RS14380 PF00474 Sodium:solute symporter family JCM16456_RS14385 PF02592 Putative vitamin uptake transporter JCM16456_RS14390 PF00625 Guanylate kinase JCM16456_RS14395 PF01192 RNA polymerase Rpb6 JCM16456_RS14400 PF13291 ACT domain JCM16456_RS14400 PF02824 TGS domain JCM16456_RS14400 PF04607 Region found in RelA / SpoT proteins JCM16456_RS14405 PF00588 SpoU rRNA Methylase family JCM16456_RS14405 PF12105 SpoU, rRNA methylase, C-terminal JCM16456_RS14410 PF17191 RecG wedge domain JCM16456_RS14410 PF00271 Helicase conserved C-terminal domain JCM16456_RS14410 PF00270 DEAD/DEAH box helicase JCM16456_RS14415 PF00860 Permease family JCM16456_RS14420 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS14420 PF00672 HAMP domain JCM16456_RS14420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS14425 PF00486 Transcriptional regulatory protein, C terminal JCM16456_RS14425 PF00072 Response regulator receiver domain JCM16456_RS14430 PF03449 Transcription elongation factor, N-terminal JCM16456_RS14430 PF01272 Transcription elongation factor, GreA/GreB, C-term JCM16456_RS14435 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS14435 PF08448 PAS fold JCM16456_RS14440 PF16921 Tex protein YqgF-like domain JCM16456_RS14440 PF17674 HHH domain JCM16456_RS14440 PF00575 S1 RNA binding domain JCM16456_RS14440 PF09371 Tex-like protein N-terminal domain JCM16456_RS14450 PF00561 alpha/beta hydrolase fold JCM16456_RS14455 PF00156 Phosphoribosyl transferase domain JCM16456_RS14460 PF01521 Iron-sulphur cluster biosynthesis JCM16456_RS14460 PF01106 NifU-like domain JCM16456_RS14465 PF00293 NUDIX domain JCM16456_RS14470 PF00459 Inositol monophosphatase family JCM16456_RS14475 PF01203 Type II secretion system (T2SS), protein N JCM16456_RS14480 PF04612 Type II secretion system (T2SS), protein M JCM16456_RS14485 PF12693 GspL periplasmic domain JCM16456_RS14485 PF05134 Type II secretion system (T2SS), protein L JCM16456_RS14490 PF03934 Type II secretion system (T2SS), protein K JCM16456_RS14495 PF07963 Prokaryotic N-terminal methylation motif JCM16456_RS14495 PF11612 Type II secretion system (T2SS), protein J JCM16456_RS14500 PF07963 Prokaryotic N-terminal methylation motif JCM16456_RS14500 PF02501 Type II secretion system (T2SS), protein I JCM16456_RS14505 PF12019 Type II transport protein GspH JCM16456_RS14510 PF08334 Type II secretion system (T2SS), protein G JCM16456_RS14510 PF07963 Prokaryotic N-terminal methylation motif JCM16456_RS14515 PF00482 Type II secretion system (T2SS), protein F JCM16456_RS14520 PF00437 Type II/IV secretion system protein JCM16456_RS14525 PF00263 Bacterial type II and III secretion system protein JCM16456_RS14525 PF03958 Bacterial type II/III secretion system short domain JCM16456_RS14530 PF11356 Type II secretion system protein C JCM16456_RS14535 PF01479 S4 domain JCM16456_RS14540 PF01430 Hsp33 protein JCM16456_RS14545 PF01293 Phosphoenolpyruvate carboxykinase JCM16456_RS14555 PF09500 Putative thioesterase (yiiD_Cterm) JCM16456_RS14555 PF00583 Acetyltransferase (GNAT) family JCM16456_RS14560 PF02580 D-Tyr-tRNA(Tyr) deacylase JCM16456_RS14565 PF03631 Virulence factor BrkB JCM16456_RS14570 PF00009 Elongation factor Tu GTP binding domain JCM16456_RS14570 PF00679 Elongation factor G C-terminus JCM16456_RS14570 PF03144 Elongation factor Tu domain 2 JCM16456_RS14575 PF03951 Glutamine synthetase, beta-Grasp domain JCM16456_RS14575 PF00120 Glutamine synthetase, catalytic domain JCM16456_RS14580 PF00989 PAS fold JCM16456_RS14580 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS14580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS14585 PF00158 Sigma-54 interaction domain JCM16456_RS14585 PF02954 Bacterial regulatory protein, Fis family JCM16456_RS14585 PF00072 Response regulator receiver domain JCM16456_RS14650 PF01177 Asp/Glu/Hydantoin racemase JCM16456_RS14655 PF07715 TonB-dependent Receptor Plug Domain JCM16456_RS14655 PF00593 TonB dependent receptor JCM16456_RS14660 PF05958 tRNA (Uracil-5-)-methyltransferase JCM16456_RS14670 PF00440 Bacterial regulatory proteins, tetR family JCM16456_RS14675 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCM16456_RS14675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCM16456_RS14680 PF01554 MatE JCM16456_RS14690 PF01726 LexA DNA binding domain JCM16456_RS14690 PF00717 Peptidase S24-like JCM16456_RS14695 PF01219 Prokaryotic diacylglycerol kinase JCM16456_RS14700 PF01553 Acyltransferase JCM16456_RS14705 PF01040 UbiA prenyltransferase family JCM16456_RS14710 PF04345 Chorismate lyase JCM16456_RS14715 PF03748 Flagellar basal body-associated protein FliL JCM16456_RS14720 PF01694 Rhomboid family JCM16456_RS14720 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease JCM16456_RS14725 PF00581 Rhodanese-like domain JCM16456_RS14730 PF04545 Sigma-70, region 4 JCM16456_RS14730 PF04542 Sigma-70 region 2 JCM16456_RS14730 PF00140 Sigma-70 factor, region 1.2 JCM16456_RS14735 PF18075 FtsX extracellular domain JCM16456_RS14740 PF00005 ABC transporter JCM16456_RS14745 PF02881 SRP54-type protein, helical bundle domain JCM16456_RS14745 PF00448 SRP54-type protein, GTPase domain JCM16456_RS14760 PF01914 MarC family integral membrane protein JCM16456_RS14785 PF00210 Ferritin-like domain JCM16456_RS14790 PF00563 EAL domain JCM16456_RS14790 PF08668 HDOD domain JCM16456_RS14795 PF12146 Serine aminopeptidase, S33 JCM16456_RS14810 PF03942 DTW domain JCM16456_RS14815 PF00990 Diguanylate cyclase, GGDEF domain JCM16456_RS14815 PF10442 FIST C domain JCM16456_RS14815 PF08495 FIST N domain JCM16456_RS14815 PF00563 EAL domain JCM16456_RS14820 PF13419 Haloacid dehalogenase-like hydrolase JCM16456_RS14825 PF00589 Phage integrase family JCM16456_RS14825 PF02899 Phage integrase, N-terminal SAM-like domain JCM16456_RS14830 PF04340 Protein of unknown function, DUF484 JCM16456_RS14835 PF01678 Diaminopimelate epimerase JCM16456_RS14840 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JCM16456_RS14840 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JCM16456_RS14845 PF01491 Frataxin-like domain JCM16456_RS14850 PF12633 Adenylate cyclase NT domain JCM16456_RS14850 PF01295 Adenylate cyclase, class-I JCM16456_RS14855 PF03900 Porphobilinogen deaminase, C-terminal domain JCM16456_RS14855 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JCM16456_RS14860 PF02602 Uroporphyrinogen-III synthase HemD JCM16456_RS14865 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase JCM16456_RS14870 PF07219 HemY protein N-terminus JCM16456_RS14870 PF07719 Tetratricopeptide repeat JCM16456_RS14875 PF04055 Radical SAM superfamily JCM16456_RS14875 PF06969 HemN C-terminal domain JCM16456_RS14880 PF10675 Protein of unknown function (DUF2489) JCM16456_RS14885 PF04220 Der GTPase activator (YihI) JCM16456_RS14895 PF04616 Glycosyl hydrolases family 43 JCM16456_RS14900 PF01926 50S ribosome-binding GTPase JCM16456_RS14905 PF01612 3'-5' exonuclease JCM16456_RS14905 PF01367 5'-3' exonuclease, C-terminal SAM fold JCM16456_RS14905 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JCM16456_RS14905 PF00476 DNA polymerase family A JCM16456_RS14910 PF00490 Delta-aminolevulinic acid dehydratase JCM16456_RS14915 PF01026 TatD related DNase JCM16456_RS14920 PF00902 Sec-independent protein translocase protein (TatC) JCM16456_RS14925 PF02416 mttA/Hcf106 family JCM16456_RS14930 PF02416 mttA/Hcf106 family JCM16456_RS14935 PF03109 ABC1 family JCM16456_RS14940 PF02036 SCP-2 sterol transfer family JCM16456_RS14945 PF01209 ubiE/COQ5 methyltransferase family JCM16456_RS14950 PF02646 RmuC family JCM16456_RS14960 PF02311 AraC-like ligand binding domain JCM16456_RS14960 PF12833 Helix-turn-helix domain JCM16456_RS14970 PF02610 L-arabinose isomerase JCM16456_RS14970 PF11762 L-arabinose isomerase C-terminal domain JCM16456_RS14975 PF00596 Class II Aldolase and Adducin N-terminal domain JCM16456_RS14980 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCM16456_RS14980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCM16456_RS14985 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JCM16456_RS14990 PF00005 ABC transporter JCM16456_RS14995 PF02653 Branched-chain amino acid transport system / permease component JCM16456_RS15000 PF13407 Periplasmic binding protein domain JCM16456_RS15005 PF00005 ABC transporter JCM16456_RS15010 PF02653 Branched-chain amino acid transport system / permease component JCM16456_RS15015 PF02653 Branched-chain amino acid transport system / permease component JCM16456_RS15025 PF01202 Shikimate kinase JCM16456_RS15030 PF02447 GntP family permease JCM16456_RS15035 PF00356 Bacterial regulatory proteins, lacI family JCM16456_RS15035 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JCM16456_RS15045 PF10625 Universal stress protein B (UspB) JCM16456_RS15050 PF00210 Ferritin-like domain JCM16456_RS15055 PF00582 Universal stress protein family JCM16456_RS15060 PF00892 EamA-like transporter family JCM16456_RS15070 PF04445 Putative SAM-dependent methyltransferase JCM16456_RS15075 PF01037 Lrp/AsnC ligand binding domain JCM16456_RS15085 PF07690 Major Facilitator Superfamily JCM16456_RS15090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS15090 PF03466 LysR substrate binding domain JCM16456_RS15095 PF01321 Creatinase/Prolidase N-terminal domain JCM16456_RS15095 PF01321 Creatinase/Prolidase N-terminal domain JCM16456_RS15095 PF00557 Metallopeptidase family M24 JCM16456_RS15095 PF00557 Metallopeptidase family M24 JCM16456_RS15100 PF13977 BetI-type transcriptional repressor, C-terminal JCM16456_RS15100 PF00440 Bacterial regulatory proteins, tetR family JCM16456_RS15105 PF00171 Aldehyde dehydrogenase family JCM16456_RS15110 PF00732 GMC oxidoreductase JCM16456_RS15110 PF05199 GMC oxidoreductase JCM16456_RS15115 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JCM16456_RS15120 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS15125 PF00571 CBS domain JCM16456_RS15125 PF00005 ABC transporter JCM16456_RS15130 PF06968 Biotin and Thiamin Synthesis associated domain JCM16456_RS15130 PF04055 Radical SAM superfamily JCM16456_RS15135 PF05690 Thiazole biosynthesis protein ThiG JCM16456_RS15145 PF00899 ThiF family JCM16456_RS15150 PF02581 Thiamine monophosphate synthase JCM16456_RS15155 PF13667 ThiC-associated domain JCM16456_RS15155 PF01964 Radical SAM ThiC family JCM16456_RS15160 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JCM16456_RS15250 PF12724 Flavodoxin domain JCM16456_RS15255 PF02386 Cation transport protein JCM16456_RS15260 PF09186 Domain of unknown function (DUF1949) JCM16456_RS15260 PF01205 Uncharacterized protein family UPF0029 JCM16456_RS15265 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCM16456_RS15265 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCM16456_RS15265 PF00378 Enoyl-CoA hydratase/isomerase JCM16456_RS15270 PF02803 Thiolase, C-terminal domain JCM16456_RS15270 PF00108 Thiolase, N-terminal domain JCM16456_RS15275 PF12804 MobA-like NTP transferase domain JCM16456_RS15275 PF00132 Bacterial transferase hexapeptide (six repeats) JCM16456_RS15275 PF14602 Hexapeptide repeat of succinyl-transferase JCM16456_RS15280 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JCM16456_RS15280 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JCM16456_RS15285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCM16456_RS15285 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCM16456_RS15290 PF00231 ATP synthase JCM16456_RS15295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCM16456_RS15295 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCM16456_RS15295 PF00306 ATP synthase alpha/beta chain, C terminal domain JCM16456_RS15300 PF00213 ATP synthase delta (OSCP) subunit JCM16456_RS15305 PF00430 ATP synthase B/B' CF(0) JCM16456_RS15310 PF00137 ATP synthase subunit C JCM16456_RS15315 PF00119 ATP synthase A chain JCM16456_RS15320 PF03899 ATP synthase I chain JCM16456_RS15325 PF17762 HTH domain found in ParB protein JCM16456_RS15325 PF02195 ParB-like nuclease domain JCM16456_RS15330 PF13614 AAA domain JCM16456_RS15335 PF02527 rRNA small subunit methyltransferase G JCM16456_RS15340 PF01134 Glucose inhibited division protein A JCM16456_RS15340 PF13932 GidA associated domain JCM16456_RS15430 PF00920 Dehydratase family JCM16456_RS15470 PF02254 TrkA-N domain JCM16456_RS15470 PF02080 TrkA-C domain JCM16456_RS15550 PF00873 AcrB/AcrD/AcrF family JCM16456_RS15695 PF00005 ABC transporter JCM16456_RS15695 PF00664 ABC transporter transmembrane region JCM16456_RS16005 PF00132 Bacterial transferase hexapeptide (six repeats) JCM16456_RS16110 PF13807 G-rich domain on putative tyrosine kinase JCM16456_RS16110 PF13614 AAA domain JCM16456_RS16110 PF02706 Chain length determinant protein JCM16456_RS16175 PF00753 Metallo-beta-lactamase superfamily JCM16456_RS16175 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JCM16456_RS16175 PF10996 Beta-Casp domain JCM16456_RS16280 PF00083 Sugar (and other) transporter JCM16456_RS16510 PF04560 RNA polymerase Rpb2, domain 7 JCM16456_RS16510 PF04565 RNA polymerase Rpb2, domain 3 JCM16456_RS16510 PF04561 RNA polymerase Rpb2, domain 2 JCM16456_RS16510 PF04563 RNA polymerase beta subunit JCM16456_RS16510 PF00562 RNA polymerase Rpb2, domain 6 JCM16456_RS16510 PF10385 RNA polymerase beta subunit external 1 domain JCM16456_RS16515 PF04561 RNA polymerase Rpb2, domain 2 JCM16456_RS16515 PF04565 RNA polymerase Rpb2, domain 3 JCM16456_RS16515 PF04563 RNA polymerase beta subunit JCM16456_RS16515 PF00562 RNA polymerase Rpb2, domain 6 JCM16456_RS16515 PF04560 RNA polymerase Rpb2, domain 7 JCM16456_RS16515 PF10385 RNA polymerase beta subunit external 1 domain JCM16456_RS16835 PF02310 B12 binding domain JCM16456_RS16835 PF02607 B12 binding domain JCM16456_RS16835 PF02965 Vitamin B12 dependent methionine synthase, activation domain JCM16456_RS16835 PF00809 Pterin binding enzyme JCM16456_RS16835 PF02574 Homocysteine S-methyltransferase JCM16456_RS17155 PF04960 Glutaminase JCM16456_RS17250 PF00924 Mechanosensitive ion channel JCM16456_RS17250 PF05552 Conserved TM helix JCM16456_RS17570 PF00488 MutS domain V JCM16456_RS17570 PF05190 MutS family domain IV JCM16456_RS17570 PF01624 MutS domain I JCM16456_RS17570 PF05188 MutS domain II JCM16456_RS17570 PF05192 MutS domain III JCM16456_RS17690 PF13180 PDZ domain JCM16456_RS17695 PF00595 PDZ domain JCM16456_RS17720 PF00033 Cytochrome b/b6/petB JCM16456_RS17720 PF00032 Cytochrome b(C-terminal)/b6/petD JCM16456_RS18015 PF00696 Amino acid kinase family JCM16456_RS18015 PF13840 ACT domain JCM16456_RS18015 PF00742 Homoserine dehydrogenase JCM16456_RS18015 PF03447 Homoserine dehydrogenase, NAD binding domain JCM16456_RS18015 PF01842 ACT domain JCM16456_RS18155 PF03764 Elongation factor G, domain IV JCM16456_RS18155 PF00009 Elongation factor Tu GTP binding domain JCM16456_RS18155 PF14492 Elongation Factor G, domain II JCM16456_RS18155 PF03144 Elongation factor Tu domain 2 JCM16456_RS18155 PF00679 Elongation factor G C-terminus JCM16456_RS18420 PF07687 Peptidase dimerisation domain JCM16456_RS18420 PF01546 Peptidase family M20/M25/M40 JCM16456_RS18475 PF00586 AIR synthase related protein, N-terminal domain JCM16456_RS18475 PF02769 AIR synthase related protein, C-terminal domain JCM16456_RS18515 PF00318 Ribosomal protein S2 JCM16456_RS18590 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCM16456_RS18590 PF02811 PHP domain JCM16456_RS18590 PF01336 OB-fold nucleic acid binding domain JCM16456_RS18590 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCM16456_RS18590 PF14579 Helix-hairpin-helix motif JCM16456_RS19025 PF00669 Bacterial flagellin N-terminal helical region JCM16456_RS19025 PF07196 Flagellin hook IN motif JCM16456_RS19025 PF00700 Bacterial flagellin C-terminal helical region JCM16456_RS19050 PF07195 Flagellar hook-associated protein 2 C-terminus JCM16456_RS19050 PF07196 Flagellin hook IN motif JCM16456_RS19050 PF02465 Flagellar hook-associated protein 2 N-terminus JCM16456_RS19055 PF07195 Flagellar hook-associated protein 2 C-terminus JCM16456_RS19055 PF02465 Flagellar hook-associated protein 2 N-terminus JCM16456_RS19055 PF07196 Flagellin hook IN motif JCM16456_RS19240 PF00676 Dehydrogenase E1 component JCM16456_RS19240 PF16870 2-oxoglutarate dehydrogenase C-terminal JCM16456_RS19240 PF02779 Transketolase, pyrimidine binding domain JCM16456_RS19240 PF16078 2-oxoglutarate dehydrogenase N-terminus JCM16456_RS19285 PF17910 FeoB cytosolic helical domain JCM16456_RS19285 PF07670 Nucleoside recognition JCM16456_RS19285 PF07664 Ferrous iron transport protein B C terminus JCM16456_RS19285 PF02421 Ferrous iron transport protein B JCM16456_RS19355 PF13614 AAA domain JCM16456_RS19395 PF03100 CcmE JCM16456_RS19440 PF13673 Acetyltransferase (GNAT) domain JCM16456_RS19765 PF14579 Helix-hairpin-helix motif JCM16456_RS19765 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCM16456_RS19765 PF01336 OB-fold nucleic acid binding domain JCM16456_RS19765 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCM16456_RS19765 PF02811 PHP domain JCM16456_RS19835 PF00155 Aminotransferase class I and II JCM16456_RS19915 PF00999 Sodium/hydrogen exchanger family JCM16456_RS20060 PF02371 Transposase IS116/IS110/IS902 family JCM16456_RS20060 PF01548 Transposase JCM16456_RS20345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM16456_RS20345 PF00512 His Kinase A (phospho-acceptor) domain JCM16456_RS20345 PF08448 PAS fold JCM16456_RS20345 PF13426 PAS domain JCM16456_RS20345 PF00072 Response regulator receiver domain JCM16456_RS20360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM16456_RS20360 PF03466 LysR substrate binding domain JCM16456_RS20425 PF00698 Acyl transferase domain JCM16456_RS20575 PF00158 Sigma-54 interaction domain JCM16456_RS20575 PF01590 GAF domain JCM16456_RS20840 PF07690 Major Facilitator Superfamily JCM16456_RS21005 PF13409 Glutathione S-transferase, N-terminal domain JCM16456_RS21165 PF08328 Adenylosuccinate lyase C-terminal JCM16456_RS21165 PF00206 Lyase JCM16456_RS21210 PF08029 HisG, C-terminal domain JCM16456_RS21210 PF01634 ATP phosphoribosyltransferase JCM16456_RS21380 PF16330 MukB hinge domain JCM16456_RS21380 PF04310 MukB N-terminal JCM16456_RS21485 PF04012 PspA/IM30 family JCM16456_RS21520 PF03527 RHS protein JCM16456_RS21520 PF05593 RHS Repeat JCM16456_RS21615 PF03222 Tryptophan/tyrosine permease family JCM16456_RS21880 PF00005 ABC transporter JCM16456_RS22005 PF02028 BCCT, betaine/carnitine/choline family transporter JCM16456_RS22175 PF00171 Aldehyde dehydrogenase family JCM16456_RS22185 PF04996 Succinylarginine dihydrolase JCM16456_RS22315 PF00579 tRNA synthetases class I (W and Y) JCM16456_RS22560 PF01970 Tripartite tricarboxylate transporter TctA family JCM16456_RS22700 PF13416 Bacterial extracellular solute-binding protein JCM16456_RS22780 PF13416 Bacterial extracellular solute-binding protein JCM16456_RS22790 PF00528 Binding-protein-dependent transport system inner membrane component JCM16456_RS22895 PF00005 ABC transporter JCM16456_RS22895 PF16326 ABC transporter C-terminal domain JCM16456_RS22895 PF12848 ABC transporter JCM16456_RS22930 PF05088 Bacterial NAD-glutamate dehydrogenase JCM16456_RS22935 PF05088 Bacterial NAD-glutamate dehydrogenase JCM16456_RS22985 PF02470 MlaD protein