locus-tag class description EPB55_RS00010 PF00313 'Cold-shock' DNA-binding domain EPB55_RS00020 PF00141 Peroxidase EPB55_RS00025 PF03009 Glycerophosphoryl diester phosphodiesterase family EPB55_RS00030 PF00455 DeoR C terminal sensor domain EPB55_RS00030 PF08220 DeoR-like helix-turn-helix domain EPB55_RS00035 PF00005 ABC transporter EPB55_RS00035 PF17912 MalK OB fold domain EPB55_RS00040 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS00045 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS00050 PF13416 Bacterial extracellular solute-binding protein EPB55_RS00055 PF00072 Response regulator receiver domain EPB55_RS00060 PF02743 Cache domain EPB55_RS00060 PF00672 HAMP domain EPB55_RS00060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS00065 PF01925 Sulfite exporter TauE/SafE EPB55_RS00075 PF00196 Bacterial regulatory proteins, luxR family EPB55_RS00075 PF00072 Response regulator receiver domain EPB55_RS00100 PF01970 Tripartite tricarboxylate transporter TctA family EPB55_RS00120 PF13087 AAA domain EPB55_RS00120 PF13086 AAA domain EPB55_RS00120 PF13195 Protein of unknown function (DUF4011) EPB55_RS00120 PF13087 AAA domain EPB55_RS00120 PF13086 AAA domain EPB55_RS00120 PF13195 Protein of unknown function (DUF4011) EPB55_RS00140 PF00285 Citrate synthase, C-terminal domain EPB55_RS00145 PF00330 Aconitase family (aconitate hydratase) EPB55_RS00145 PF00694 Aconitase C-terminal domain EPB55_RS00150 PF04303 PrpF protein EPB55_RS00155 PF16177 Acetyl-coenzyme A synthetase N-terminus EPB55_RS00155 PF00501 AMP-binding enzyme EPB55_RS00155 PF13193 AMP-binding enzyme C-terminal domain EPB55_RS00175 PF02743 Cache domain EPB55_RS00175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS00175 PF00672 HAMP domain EPB55_RS00185 PF04055 Radical SAM superfamily EPB55_RS00190 PF06508 Queuosine biosynthesis protein QueC EPB55_RS00195 PF17151 Periplasmic sensor domain EPB55_RS00195 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS00240 PF17785 PUA-like domain EPB55_RS00240 PF10672 S-adenosylmethionine-dependent methyltransferase EPB55_RS00245 PF02743 Cache domain EPB55_RS00245 PF00672 HAMP domain EPB55_RS00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS00250 PF00708 Acylphosphatase EPB55_RS00255 PF04358 DsrC like protein EPB55_RS00265 PF01027 Inhibitor of apoptosis-promoting Bax1 EPB55_RS00270 PF00005 ABC transporter EPB55_RS00275 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS00280 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS00285 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPB55_RS00290 PF14824 Sirohaem biosynthesis protein central EPB55_RS00290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EPB55_RS00290 PF10414 Sirohaem synthase dimerisation region EPB55_RS00295 PF12800 4Fe-4S binding domain EPB55_RS00295 PF12838 4Fe-4S dicluster domain EPB55_RS00300 PF12801 4Fe-4S binding domain EPB55_RS00300 PF12837 4Fe-4S binding domain EPB55_RS00305 PF01553 Acyltransferase EPB55_RS00310 PF02074 Carboxypeptidase Taq (M32) metallopeptidase EPB55_RS00325 PF01235 Sodium:alanine symporter family EPB55_RS00350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EPB55_RS00365 PF00989 PAS fold EPB55_RS00365 PF17203 Single cache domain 3 EPB55_RS00365 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain EPB55_RS00365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS00370 PF00072 Response regulator receiver domain EPB55_RS00370 PF12431 Transcriptional regulator EPB55_RS00375 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EPB55_RS00375 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EPB55_RS00380 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EPB55_RS00385 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EPB55_RS00385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EPB55_RS00420 PF02397 Bacterial sugar transferase EPB55_RS00430 PF13439 Glycosyltransferase Family 4 EPB55_RS00430 PF00534 Glycosyl transferases group 1 EPB55_RS00475 PF02954 Bacterial regulatory protein, Fis family EPB55_RS00475 PF00072 Response regulator receiver domain EPB55_RS00475 PF00158 Sigma-54 interaction domain EPB55_RS00480 PF17149 Periplasmic sensor domain found in signal transduction proteins EPB55_RS00480 PF01627 Hpt domain EPB55_RS00480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS00480 PF00672 HAMP domain EPB55_RS00480 PF00072 Response regulator receiver domain EPB55_RS00480 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS00495 PF02563 Polysaccharide biosynthesis/export protein EPB55_RS00495 PF10531 SLBB domain EPB55_RS00505 PF01740 STAS domain EPB55_RS00510 PF01068 ATP dependent DNA ligase domain EPB55_RS00510 PF14743 DNA ligase OB-like domain EPB55_RS00520 PF04461 Protein of unknown function (DUF520) EPB55_RS00525 PF00793 DAHP synthetase I family EPB55_RS00540 PF13509 S1 domain EPB55_RS00540 PF17783 CvfB-like winged helix domain EPB55_RS00545 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF EPB55_RS00545 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF EPB55_RS00545 PF01189 16S rRNA methyltransferase RsmB/F EPB55_RS00550 PF02470 MlaD protein EPB55_RS00555 PF04403 Paraquat-inducible protein A EPB55_RS00560 PF00005 ABC transporter EPB55_RS00560 PF00664 ABC transporter transmembrane region EPB55_RS00565 PF13185 GAF domain EPB55_RS00570 PF04352 ProQ/FINO family EPB55_RS00570 PF17516 ProQ C-terminal domain EPB55_RS00575 PF11818 C-terminal domain of tail specific protease (DUF3340) EPB55_RS00575 PF03572 Peptidase family S41 EPB55_RS00575 PF00595 PDZ domain EPB55_RS00575 PF17804 Tail specific protease N-terminal domain EPB55_RS00585 PF01433 Peptidase family M1 domain EPB55_RS00585 PF17432 Domain of unknown function (DUF3458_C) ARM repeats EPB55_RS00585 PF11940 Domain of unknown function (DUF3458) Ig-like fold EPB55_RS00595 PF05088 Bacterial NAD-glutamate dehydrogenase EPB55_RS00600 PF01180 Dihydroorotate dehydrogenase EPB55_RS00605 PF07126 Cell-division protein ZapC EPB55_RS00610 PF01170 Putative RNA methylase family UPF0020 EPB55_RS00610 PF02926 THUMP domain EPB55_RS00610 PF10672 S-adenosylmethionine-dependent methyltransferase EPB55_RS00620 PF12848 ABC transporter EPB55_RS00620 PF16326 ABC transporter C-terminal domain EPB55_RS00620 PF00005 ABC transporter EPB55_RS00630 PF04957 Ribosome modulation factor EPB55_RS00635 PF07977 FabA-like domain EPB55_RS00640 PF13654 AAA domain EPB55_RS00640 PF05362 Lon protease (S16) C-terminal proteolytic domain EPB55_RS00645 PF17414 MatP C-terminal ribbon-helix-helix domain EPB55_RS00645 PF06303 MatP N-terminal domain EPB55_RS00750 PF09308 LuxQ, periplasmic EPB55_RS00750 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS00750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS00750 PF00072 Response regulator receiver domain EPB55_RS00765 PF00115 Cytochrome C and Quinol oxidase polypeptide I EPB55_RS00780 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EPB55_RS00780 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP EPB55_RS00790 PF00403 Heavy-metal-associated domain EPB55_RS00805 PF13545 Crp-like helix-turn-helix domain EPB55_RS00805 PF00027 Cyclic nucleotide-binding domain EPB55_RS00810 PF00582 Universal stress protein family EPB55_RS00815 PF01171 PP-loop family EPB55_RS00820 PF01609 Transposase DDE domain EPB55_RS00820 PF13006 Insertion element 4 transposase N-terminal EPB55_RS00830 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EPB55_RS00840 PF00005 ABC transporter EPB55_RS00840 PF08402 TOBE domain EPB55_RS00845 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS00850 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS00855 PF13416 Bacterial extracellular solute-binding protein EPB55_RS00860 PF13416 Bacterial extracellular solute-binding protein EPB55_RS00865 PF02146 Sir2 family EPB55_RS00870 PF00909 Ammonium Transporter Family EPB55_RS00905 PF13247 4Fe-4S dicluster domain EPB55_RS00910 PF00384 Molybdopterin oxidoreductase EPB55_RS00910 PF01568 Molydopterin dinucleotide binding domain EPB55_RS00910 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EPB55_RS00940 PF02634 FdhD/NarQ family EPB55_RS00945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS00945 PF00672 HAMP domain EPB55_RS00945 PF02743 Cache domain EPB55_RS00950 PF12848 ABC transporter EPB55_RS00950 PF00005 ABC transporter EPB55_RS00965 PF00989 PAS fold EPB55_RS00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS00965 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS00970 PF02954 Bacterial regulatory protein, Fis family EPB55_RS00970 PF00158 Sigma-54 interaction domain EPB55_RS00970 PF00072 Response regulator receiver domain EPB55_RS00975 PF12849 PBP superfamily domain EPB55_RS00980 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS00985 PF08402 TOBE domain EPB55_RS00985 PF00005 ABC transporter EPB55_RS00990 PF12804 MobA-like NTP transferase domain EPB55_RS00995 PF03454 MoeA C-terminal region (domain IV) EPB55_RS00995 PF03453 MoeA N-terminal region (domain I and II) EPB55_RS00995 PF00994 Probable molybdopterin binding domain EPB55_RS01005 PF00480 ROK family EPB55_RS01010 PF03942 DTW domain EPB55_RS01020 PF00672 HAMP domain EPB55_RS01020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS01020 PF02743 Cache domain EPB55_RS01025 PF00877 NlpC/P60 family EPB55_RS01035 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS01035 PF05230 MASE2 domain EPB55_RS01040 PF01339 CheB methylesterase EPB55_RS01040 PF00072 Response regulator receiver domain EPB55_RS01045 PF03881 Fructosamine kinase EPB55_RS01055 PF00677 Lumazine binding domain EPB55_RS01060 PF01554 MatE EPB55_RS01115 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system EPB55_RS01120 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system EPB55_RS01155 PF02567 Phenazine biosynthesis-like protein EPB55_RS01275 PF13302 Acetyltransferase (GNAT) domain EPB55_RS01330 PF13419 Haloacid dehalogenase-like hydrolase EPB55_RS01440 PF01042 Endoribonuclease L-PSP EPB55_RS01465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EPB55_RS01625 PF05840 Bacteriophage replication gene A protein (GPA) EPB55_RS01640 PF00589 Phage integrase family EPB55_RS01730 PF13302 Acetyltransferase (GNAT) domain EPB55_RS01755 PF13302 Acetyltransferase (GNAT) domain EPB55_RS01840 PF06940 Domain of unknown function (DUF1287) EPB55_RS01985 PF06940 Domain of unknown function (DUF1287) EPB55_RS02430 PF00043 Glutathione S-transferase, C-terminal domain EPB55_RS02430 PF02798 Glutathione S-transferase, N-terminal domain EPB55_RS02480 PF13302 Acetyltransferase (GNAT) domain EPB55_RS02655 PF00583 Acetyltransferase (GNAT) family EPB55_RS02710 PF02567 Phenazine biosynthesis-like protein EPB55_RS02725 PF00043 Glutathione S-transferase, C-terminal domain EPB55_RS02725 PF02798 Glutathione S-transferase, N-terminal domain EPB55_RS02765 PF02567 Phenazine biosynthesis-like protein EPB55_RS02870 PF00106 short chain dehydrogenase EPB55_RS02930 PF05016 ParE toxin of type II toxin-antitoxin system, parDE EPB55_RS02960 PF13302 Acetyltransferase (GNAT) domain EPB55_RS02985 PF00589 Phage integrase family EPB55_RS02985 PF13495 Phage integrase, N-terminal SAM-like domain EPB55_RS02990 PF00453 Ribosomal protein L20 EPB55_RS02995 PF01632 Ribosomal protein L35 EPB55_RS03000 PF05198 Translation initiation factor IF-3, N-terminal domain EPB55_RS03000 PF00707 Translation initiation factor IF-3, C-terminal domain EPB55_RS03005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EPB55_RS03005 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EPB55_RS03005 PF03129 Anticodon binding domain EPB55_RS03005 PF02824 TGS domain EPB55_RS03015 PF07070 SpoOM protein EPB55_RS03020 PF00392 Bacterial regulatory proteins, gntR family EPB55_RS03020 PF07702 UTRA domain EPB55_RS03025 PF01979 Amidohydrolase family EPB55_RS03030 PF00491 Arginase family EPB55_RS03035 PF17392 Urocanase C-terminal domain EPB55_RS03035 PF17391 Urocanase N-terminal domain EPB55_RS03035 PF01175 Urocanase Rossmann-like domain EPB55_RS03040 PF00221 Aromatic amino acid lyase EPB55_RS03050 PF00089 Trypsin EPB55_RS03060 PF13183 4Fe-4S dicluster domain EPB55_RS03060 PF01565 FAD binding domain EPB55_RS03060 PF02913 FAD linked oxidases, C-terminal domain EPB55_RS03075 PF13488 Glycine zipper EPB55_RS03075 PF00691 OmpA family EPB55_RS03090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EPB55_RS03090 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region EPB55_RS03095 PF02222 ATP-grasp domain EPB55_RS03100 PF05724 Thiopurine S-methyltransferase (TPMT) EPB55_RS03110 PF00216 Bacterial DNA-binding protein EPB55_RS03125 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EPB55_RS03125 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EPB55_RS03130 PF03484 tRNA synthetase B5 domain EPB55_RS03130 PF03147 Ferredoxin-fold anticodon binding domain EPB55_RS03130 PF01588 Putative tRNA binding domain EPB55_RS03130 PF03483 B3/4 domain EPB55_RS03130 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EPB55_RS03135 PF01409 tRNA synthetases class II core domain (F) EPB55_RS03135 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EPB55_RS03140 PF00072 Response regulator receiver domain EPB55_RS03140 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS03200 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EPB55_RS03200 PF17944 Arginine decarboxylase C-terminal helical extension EPB55_RS03200 PF17810 Arginine decarboxylase helical bundle domain EPB55_RS03205 PF00491 Arginase family EPB55_RS03210 PF12729 Four helix bundle sensory module for signal transduction EPB55_RS03210 PF00672 HAMP domain EPB55_RS03210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS03225 PF07690 Major Facilitator Superfamily EPB55_RS03235 PF06580 Histidine kinase EPB55_RS03235 PF07694 5TMR of 5TMR-LYT EPB55_RS03235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS03240 PF00072 Response regulator receiver domain EPB55_RS03240 PF04397 LytTr DNA-binding domain EPB55_RS03245 PF03280 Proteobacterial lipase chaperone protein EPB55_RS03250 PF00561 alpha/beta hydrolase fold EPB55_RS03275 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold EPB55_RS03275 PF00270 DEAD/DEAH box helicase EPB55_RS03275 PF00271 Helicase conserved C-terminal domain EPB55_RS03275 PF04408 Helicase associated domain (HA2) EPB55_RS03275 PF11898 Domain of unknown function (DUF3418) EPB55_RS03285 PF02525 Flavodoxin-like fold EPB55_RS03320 PF00437 Type II/IV secretion system protein EPB55_RS03325 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EPB55_RS03335 PF13629 Pilus formation protein N terminal region EPB55_RS03335 PF00263 Bacterial type II and III secretion system protein EPB55_RS03335 PF04972 BON domain EPB55_RS03365 PF06629 MltA-interacting protein MipA EPB55_RS03385 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS03385 PF17158 Membrane-associated sensor, integral membrane domain EPB55_RS03395 PF00012 Hsp70 protein EPB55_RS03400 PF00012 Hsp70 protein EPB55_RS03415 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS03415 PF00563 EAL domain EPB55_RS03415 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS03425 PF07963 Prokaryotic N-terminal methylation motif EPB55_RS03440 PF13439 Glycosyltransferase Family 4 EPB55_RS03440 PF00534 Glycosyl transferases group 1 EPB55_RS03445 PF00534 Glycosyl transferases group 1 EPB55_RS03445 PF13439 Glycosyltransferase Family 4 EPB55_RS03470 PF10531 SLBB domain EPB55_RS03470 PF02563 Polysaccharide biosynthesis/export protein EPB55_RS03470 PF18412 Outer-membrane lipoprotein Wza C-terminal domain EPB55_RS03480 PF02397 Bacterial sugar transferase EPB55_RS03485 PF01235 Sodium:alanine symporter family EPB55_RS03490 PF00664 ABC transporter transmembrane region EPB55_RS03490 PF00005 ABC transporter EPB55_RS03495 PF00005 ABC transporter EPB55_RS03495 PF00664 ABC transporter transmembrane region EPB55_RS03510 PF00210 Ferritin-like domain EPB55_RS03515 PF00072 Response regulator receiver domain EPB55_RS03520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EPB55_RS03525 PF03222 Tryptophan/tyrosine permease family EPB55_RS03530 PF00781 Diacylglycerol kinase catalytic domain EPB55_RS03540 PF01734 Patatin-like phospholipase EPB55_RS03545 PF01966 HD domain EPB55_RS03560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS03560 PF03466 LysR substrate binding domain EPB55_RS03565 PF04055 Radical SAM superfamily EPB55_RS03570 PF11230 Protein of unknown function (DUF3029) EPB55_RS03575 PF13188 PAS domain EPB55_RS03575 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS03575 PF00563 EAL domain EPB55_RS03575 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS03580 PF01966 HD domain EPB55_RS03580 PF11871 Domain of unknown function (DUF3391) EPB55_RS03590 PF05231 MASE1 EPB55_RS03590 PF00563 EAL domain EPB55_RS03595 PF17158 Membrane-associated sensor, integral membrane domain EPB55_RS03595 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS03605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS03605 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS03605 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPB55_RS03610 PF00939 Sodium:sulfate symporter transmembrane region EPB55_RS03625 PF13302 Acetyltransferase (GNAT) domain EPB55_RS03630 PF18024 Helix-turn-helix domain EPB55_RS03630 PF13188 PAS domain EPB55_RS03630 PF00158 Sigma-54 interaction domain EPB55_RS03635 PF05128 Domain of unknown function (DUF697) EPB55_RS03640 PF04317 YcjX-like family, DUF463 EPB55_RS03655 PF04715 Anthranilate synthase component I, N terminal region EPB55_RS03655 PF00425 chorismate binding enzyme EPB55_RS03660 PF00072 Response regulator receiver domain EPB55_RS03660 PF09308 LuxQ, periplasmic EPB55_RS03660 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS03660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS03670 PF00293 NUDIX domain EPB55_RS03675 PF03222 Tryptophan/tyrosine permease family EPB55_RS03680 PF03313 Serine dehydratase alpha chain EPB55_RS03680 PF03315 Serine dehydratase beta chain EPB55_RS03685 PF04940 Sensors of blue-light using FAD EPB55_RS03685 PF00563 EAL domain EPB55_RS03695 PF01242 6-pyruvoyl tetrahydropterin synthase EPB55_RS03700 PF00672 HAMP domain EPB55_RS03700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS03700 PF12729 Four helix bundle sensory module for signal transduction EPB55_RS03705 PF00152 tRNA synthetases class II (D, K and N) EPB55_RS03705 PF01336 OB-fold nucleic acid binding domain EPB55_RS03715 PF00392 Bacterial regulatory proteins, gntR family EPB55_RS03715 PF00155 Aminotransferase class I and II EPB55_RS03730 PF00672 HAMP domain EPB55_RS03730 PF01966 HD domain EPB55_RS03735 PF00155 Aminotransferase class I and II EPB55_RS03755 PF00672 HAMP domain EPB55_RS03755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS03755 PF02743 Cache domain EPB55_RS03760 PF02028 BCCT, betaine/carnitine/choline family transporter EPB55_RS03765 PF01047 MarR family EPB55_RS03770 PF00072 Response regulator receiver domain EPB55_RS03770 PF00196 Bacterial regulatory proteins, luxR family EPB55_RS03775 PF17200 Single Cache domain 2 EPB55_RS03775 PF07730 Histidine kinase EPB55_RS03780 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EPB55_RS03790 PF03480 Bacterial extracellular solute-binding protein, family 7 EPB55_RS03805 PF00753 Metallo-beta-lactamase superfamily EPB55_RS03810 PF05951 Bacterial protein of unknown function (DUF882) EPB55_RS03815 PF03734 L,D-transpeptidase catalytic domain EPB55_RS03815 PF01471 Putative peptidoglycan binding domain EPB55_RS03840 PF00925 GTP cyclohydrolase II EPB55_RS03845 PF07840 FadR C-terminal domain EPB55_RS03845 PF00392 Bacterial regulatory proteins, gntR family EPB55_RS03850 PF06450 Bacterial Na+/H+ antiporter B (NhaB) EPB55_RS03855 PF02600 Disulfide bond formation protein DsbB EPB55_RS03860 PF02810 SEC-C motif EPB55_RS03860 PF03695 Uncharacterised protein family (UPF0149) EPB55_RS03865 PF01207 Dihydrouridine synthase (Dus) EPB55_RS03875 PF00128 Alpha amylase, catalytic domain EPB55_RS03875 PF02903 Alpha amylase, N-terminal ig-like domain EPB55_RS03880 PF00005 ABC transporter EPB55_RS03885 PF02653 Branched-chain amino acid transport system / permease component EPB55_RS03895 PF04217 Protein of unknown function, DUF412 EPB55_RS03900 PF00871 Acetokinase family EPB55_RS03905 PF01515 Phosphate acetyl/butaryl transferase EPB55_RS03905 PF07085 DRTGG domain EPB55_RS03910 PF08267 Cobalamin-independent synthase, N-terminal domain EPB55_RS03910 PF01717 Cobalamin-independent synthase, Catalytic domain EPB55_RS03915 PF03466 LysR substrate binding domain EPB55_RS03915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS03930 PF00563 EAL domain EPB55_RS03930 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS03930 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS03935 PF00563 EAL domain EPB55_RS03935 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS03935 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS03940 PF08497 Radical SAM N-terminal EPB55_RS03940 PF04055 Radical SAM superfamily EPB55_RS03940 PF11842 Domain of unknown function (DUF3362) EPB55_RS03945 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS03945 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS03945 PF00563 EAL domain EPB55_RS03955 PF00916 Sulfate permease family EPB55_RS03955 PF01740 STAS domain EPB55_RS03960 PF02311 AraC-like ligand binding domain EPB55_RS03960 PF12833 Helix-turn-helix domain EPB55_RS03975 PF03741 Integral membrane protein TerC family EPB55_RS03980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EPB55_RS03980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EPB55_RS03985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS03985 PF00672 HAMP domain EPB55_RS03985 PF02743 Cache domain EPB55_RS03990 PF13419 Haloacid dehalogenase-like hydrolase EPB55_RS04005 PF04229 GrpB protein EPB55_RS04045 PF00266 Aminotransferase class-V EPB55_RS04105 PF12833 Helix-turn-helix domain EPB55_RS04110 PF00384 Molybdopterin oxidoreductase EPB55_RS04110 PF01568 Molydopterin dinucleotide binding domain EPB55_RS04110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EPB55_RS04115 PF03916 Polysulphide reductase, NrfD EPB55_RS04120 PF13247 4Fe-4S dicluster domain EPB55_RS04125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS04125 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS04130 PF00196 Bacterial regulatory proteins, luxR family EPB55_RS04130 PF00072 Response regulator receiver domain EPB55_RS04165 PF17200 Single Cache domain 2 EPB55_RS04165 PF00672 HAMP domain EPB55_RS04165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS04170 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS04170 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS04170 PF00563 EAL domain EPB55_RS04200 PF11867 Domain of unknown function (DUF3387) EPB55_RS04200 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EPB55_RS04200 PF18766 SWI2/SNF2 ATPase EPB55_RS04205 PF01420 Type I restriction modification DNA specificity domain EPB55_RS04225 PF04002 RadC-like JAB domain EPB55_RS04240 PF00075 RNase H EPB55_RS04280 PF00589 Phage integrase family EPB55_RS04280 PF13356 Arm DNA-binding domain EPB55_RS04290 PF06610 L-alanine exporter EPB55_RS04295 PF00072 Response regulator receiver domain EPB55_RS04295 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS04295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS04295 PF09308 LuxQ, periplasmic EPB55_RS04305 PF03738 Glutathionylspermidine synthase preATP-grasp EPB55_RS04315 PF03994 Domain of Unknown Function (DUF350) EPB55_RS04325 PF02445 Quinolinate synthetase A protein EPB55_RS04330 PF16331 TolA binding protein trimerisation EPB55_RS04330 PF13174 Tetratricopeptide repeat EPB55_RS04335 PF00691 OmpA family EPB55_RS04340 PF04052 TolB amino-terminal domain EPB55_RS04340 PF07676 WD40-like Beta Propeller Repeat EPB55_RS04350 PF02472 Biopolymer transport protein ExbD/TolR EPB55_RS04355 PF01618 MotA/TolQ/ExbB proton channel family EPB55_RS04360 PF03061 Thioesterase superfamily EPB55_RS04370 PF08173 Membrane bound YbgT-like protein EPB55_RS04375 PF02322 Cytochrome bd terminal oxidase subunit II EPB55_RS04380 PF01654 Cytochrome bd terminal oxidase subunit I EPB55_RS04385 PF05496 Holliday junction DNA helicase RuvB P-loop domain EPB55_RS04385 PF05491 RuvB C-terminal winged helix domain EPB55_RS04385 PF17864 RuvB AAA lid domain EPB55_RS04390 PF01330 RuvA N terminal domain EPB55_RS04390 PF07499 RuvA, C-terminal domain EPB55_RS04395 PF00672 HAMP domain EPB55_RS04395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS04395 PF02203 Tar ligand binding domain homologue EPB55_RS04400 PF02075 Crossover junction endodeoxyribonuclease RuvC EPB55_RS04405 PF02938 GAD domain EPB55_RS04405 PF01336 OB-fold nucleic acid binding domain EPB55_RS04405 PF00152 tRNA synthetases class II (D, K and N) EPB55_RS04415 PF13649 Methyltransferase domain EPB55_RS04420 PF08003 Protein of unknown function (DUF1698) EPB55_RS04425 PF08443 RimK-like ATP-grasp domain EPB55_RS04425 PF18030 RimK PreATP-grasp domain EPB55_RS04440 PF05199 GMC oxidoreductase EPB55_RS04440 PF00732 GMC oxidoreductase EPB55_RS04445 PF00171 Aldehyde dehydrogenase family EPB55_RS04450 PF12833 Helix-turn-helix domain EPB55_RS04450 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EPB55_RS04455 PF04310 MukB N-terminal EPB55_RS04455 PF16330 MukB hinge domain EPB55_RS04460 PF04288 MukE-like family EPB55_RS04465 PF17192 MukF middle domain EPB55_RS04465 PF17193 MukF C-terminal domain EPB55_RS04465 PF03882 MukF winged-helix domain EPB55_RS04470 PF13847 Methyltransferase domain EPB55_RS04475 PF02698 DUF218 domain EPB55_RS04480 PF00486 Transcriptional regulatory protein, C terminal EPB55_RS04480 PF00072 Response regulator receiver domain EPB55_RS04485 PF02613 Nitrate reductase delta subunit EPB55_RS04490 PF00356 Bacterial regulatory proteins, lacI family EPB55_RS04495 PF04993 TfoX N-terminal domain EPB55_RS04495 PF04994 TfoX C-terminal domain EPB55_RS04510 PF00561 alpha/beta hydrolase fold EPB55_RS04515 PF08323 Starch synthase catalytic domain EPB55_RS04515 PF00534 Glycosyl transferases group 1 EPB55_RS04520 PF00483 Nucleotidyl transferase EPB55_RS04525 PF08272 Topoisomerase I zinc-ribbon-like EPB55_RS04525 PF01751 Toprim domain EPB55_RS04525 PF01131 DNA topoisomerase EPB55_RS04525 PF01396 Topoisomerase DNA binding C4 zinc finger EPB55_RS04530 PF10692 Protein of unknown function (DUF2498) EPB55_RS04545 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EPB55_RS04550 PF04376 Arginine-tRNA-protein transferase, N terminus EPB55_RS04550 PF04377 Arginine-tRNA-protein transferase, C terminus EPB55_RS04555 PF01176 Translation initiation factor 1A / IF-1 EPB55_RS04560 PF00004 ATPase family associated with various cellular activities (AAA) EPB55_RS04560 PF17871 AAA lid domain EPB55_RS04560 PF02861 Clp amino terminal domain, pathogenicity island component EPB55_RS04560 PF10431 C-terminal, D2-small domain, of ClpB protein EPB55_RS04560 PF07724 AAA domain (Cdc48 subfamily) EPB55_RS04565 PF02617 ATP-dependent Clp protease adaptor protein ClpS EPB55_RS04570 PF00313 'Cold-shock' DNA-binding domain EPB55_RS04575 PF03971 Monomeric isocitrate dehydrogenase EPB55_RS04580 PF00849 RNA pseudouridylate synthase EPB55_RS04590 PF06733 DEAD_2 EPB55_RS04590 PF13307 Helicase C-terminal domain EPB55_RS04595 PF01925 Sulfite exporter TauE/SafE EPB55_RS04600 PF07445 Primosomal replication protein priC EPB55_RS04605 PF10689 Protein of unknown function (DUF2496) EPB55_RS04610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS04610 PF00672 HAMP domain EPB55_RS04610 PF02743 Cache domain EPB55_RS04615 PF03372 Endonuclease/Exonuclease/phosphatase family EPB55_RS04625 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS04630 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS04635 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPB55_RS04640 PF00005 ABC transporter EPB55_RS04655 PF02901 Pyruvate formate lyase-like EPB55_RS04655 PF01228 Glycine radical EPB55_RS04665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS04665 PF00672 HAMP domain EPB55_RS04670 PF04055 Radical SAM superfamily EPB55_RS04680 PF03887 YfbU domain EPB55_RS04685 PF08298 PrkA AAA domain EPB55_RS04685 PF06798 PrkA serine protein kinase C-terminal domain EPB55_RS04690 PF04285 Protein of unknown function (DUF444) EPB55_RS04695 PF04293 SpoVR like protein EPB55_RS04700 PF17155 Gammaproteobacterial periplasmic sensor domain EPB55_RS04700 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS04705 PF02348 Cytidylyltransferase EPB55_RS04710 PF03966 Trm112p-like protein EPB55_RS04715 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EPB55_RS04720 PF00664 ABC transporter transmembrane region EPB55_RS04720 PF00005 ABC transporter EPB55_RS04725 PF00753 Metallo-beta-lactamase superfamily EPB55_RS04725 PF13567 Domain of unknown function (DUF4131) EPB55_RS04725 PF03772 Competence protein EPB55_RS04735 PF02687 FtsX-like permease family EPB55_RS04735 PF12704 MacB-like periplasmic core domain EPB55_RS04740 PF00005 ABC transporter EPB55_RS04745 PF12704 MacB-like periplasmic core domain EPB55_RS04745 PF02687 FtsX-like permease family EPB55_RS04755 PF17757 UvrB interaction domain EPB55_RS04755 PF00270 DEAD/DEAH box helicase EPB55_RS04755 PF03461 TRCF domain EPB55_RS04755 PF00271 Helicase conserved C-terminal domain EPB55_RS04755 PF02559 CarD-like/TRCF domain EPB55_RS04770 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB55_RS04775 PF05728 Uncharacterised protein family (UPF0227) EPB55_RS04785 PF13036 Peptidoglycan-synthase activator LpoB EPB55_RS04785 PF08139 Prokaryotic membrane lipoprotein lipid attachment site EPB55_RS04800 PF01230 HIT domain EPB55_RS04805 PF00672 HAMP domain EPB55_RS04805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS04815 PF01048 Phosphorylase superfamily EPB55_RS04820 PF00403 Heavy-metal-associated domain EPB55_RS04825 PF00571 CBS domain EPB55_RS04825 PF01743 Poly A polymerase head domain EPB55_RS04830 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS04835 PF01276 Orn/Lys/Arg decarboxylase, major domain EPB55_RS04835 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain EPB55_RS04835 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EPB55_RS04840 PF13520 Amino acid permease EPB55_RS04845 PF18500 CadC C-terminal domain 1 EPB55_RS04845 PF00486 Transcriptional regulatory protein, C terminal EPB55_RS04855 PF02743 Cache domain EPB55_RS04855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS04855 PF00672 HAMP domain EPB55_RS04865 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS04870 PF01769 Divalent cation transporter EPB55_RS04870 PF03448 MgtE intracellular N domain EPB55_RS04870 PF00571 CBS domain EPB55_RS04880 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EPB55_RS04880 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EPB55_RS04885 PF13847 Methyltransferase domain EPB55_RS04900 PF00245 Alkaline phosphatase EPB55_RS04910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EPB55_RS04920 PF03692 Putative zinc- or iron-chelating domain EPB55_RS04925 PF03692 Putative zinc- or iron-chelating domain EPB55_RS04930 PF00230 Major intrinsic protein EPB55_RS04935 PF00072 Response regulator receiver domain EPB55_RS04935 PF00486 Transcriptional regulatory protein, C terminal EPB55_RS04940 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS04940 PF00672 HAMP domain EPB55_RS04940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS04955 PF13662 Toprim domain EPB55_RS04955 PF02132 RecR protein EPB55_RS04960 PF02575 YbaB/EbfC DNA-binding family EPB55_RS04965 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding EPB55_RS04965 PF12169 DNA polymerase III subunits gamma and tau domain III EPB55_RS04965 PF12170 DNA polymerase III tau subunit V interacting with alpha EPB55_RS04970 PF00156 Phosphoribosyl transferase domain EPB55_RS04975 PF04304 Protein of unknown function (DUF454) EPB55_RS04985 PF00072 Response regulator receiver domain EPB55_RS04990 PF03466 LysR substrate binding domain EPB55_RS04990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS04995 PF00156 Phosphoribosyl transferase domain EPB55_RS05000 PF02674 Colicin V production protein EPB55_RS05005 PF05036 Sporulation related domain EPB55_RS05010 PF08245 Mur ligase middle domain EPB55_RS05010 PF02875 Mur ligase family, glutamate ligase domain EPB55_RS05015 PF17848 Acetyl-coA carboxylase zinc finger domain EPB55_RS05015 PF01039 Carboxyl transferase domain EPB55_RS05020 PF01416 tRNA pseudouridine synthase EPB55_RS05030 PF02774 Semialdehyde dehydrogenase, dimerisation domain EPB55_RS05030 PF01118 Semialdehyde dehydrogenase, NAD binding domain EPB55_RS05035 PF11890 Domain of unknown function (DUF3410) EPB55_RS05035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EPB55_RS05035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EPB55_RS05040 PF02801 Beta-ketoacyl synthase, C-terminal domain EPB55_RS05040 PF00109 Beta-ketoacyl synthase, N-terminal domain EPB55_RS05045 PF05430 S-adenosyl-L-methionine-dependent methyltransferase EPB55_RS05045 PF01266 FAD dependent oxidoreductase EPB55_RS05050 PF08891 YfcL protein EPB55_RS05055 PF04315 Elongation factor P hydroxylase EPB55_RS05060 PF03458 UPF0126 domain EPB55_RS05065 PF01264 Chorismate synthase EPB55_RS05070 PF05175 Methyltransferase small domain EPB55_RS05075 PF01713 Smr domain EPB55_RS05080 PF00300 Histidine phosphatase superfamily (branch 1) EPB55_RS05085 PF05193 Peptidase M16 inactive domain EPB55_RS05085 PF00675 Insulinase (Peptidase family M16) EPB55_RS05090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EPB55_RS05090 PF00378 Enoyl-CoA hydratase/isomerase EPB55_RS05090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EPB55_RS05095 PF02803 Thiolase, C-terminal domain EPB55_RS05095 PF00108 Thiolase, N-terminal domain EPB55_RS05100 PF04542 Sigma-70 region 2 EPB55_RS05100 PF08281 Sigma-70, region 4 EPB55_RS05110 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EPB55_RS05115 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EPB55_RS05120 PF04333 MlaA lipoprotein EPB55_RS05125 PF03918 Cytochrome C biogenesis protein EPB55_RS05130 PF03918 Cytochrome C biogenesis protein EPB55_RS05135 PF08534 Redoxin EPB55_RS05140 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EPB55_RS05140 PF01578 Cytochrome C assembly protein EPB55_RS05145 PF03100 CcmE EPB55_RS05150 PF04995 Heme exporter protein D (CcmD) EPB55_RS05155 PF01578 Cytochrome C assembly protein EPB55_RS05160 PF03379 CcmB protein EPB55_RS05165 PF00005 ABC transporter EPB55_RS05175 PF01584 CheW-like domain EPB55_RS05185 PF13614 AAA domain EPB55_RS05190 PF00072 Response regulator receiver domain EPB55_RS05190 PF01339 CheB methylesterase EPB55_RS05195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS05195 PF00072 Response regulator receiver domain EPB55_RS05195 PF01627 Hpt domain EPB55_RS05195 PF01584 CheW-like domain EPB55_RS05195 PF02895 Signal transducing histidine kinase, homodimeric domain EPB55_RS05200 PF04344 Chemotaxis phosphatase, CheZ EPB55_RS05205 PF00072 Response regulator receiver domain EPB55_RS05210 PF04542 Sigma-70 region 2 EPB55_RS05210 PF04545 Sigma-70, region 4 EPB55_RS05210 PF04539 Sigma-70 region 3 EPB55_RS05215 PF10609 NUBPL iron-transfer P-loop NTPase EPB55_RS05220 PF00448 SRP54-type protein, GTPase domain EPB55_RS05225 PF00771 FHIPEP family EPB55_RS05230 PF01312 FlhB HrpN YscU SpaS Family EPB55_RS05235 PF01311 Bacterial export proteins, family 1 EPB55_RS05240 PF01313 Bacterial export proteins, family 3 EPB55_RS05245 PF00813 FliP family EPB55_RS05250 PF04347 Flagellar biosynthesis protein, FliO EPB55_RS05255 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EPB55_RS05260 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EPB55_RS05260 PF02154 Flagellar motor switch protein FliM EPB55_RS05280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EPB55_RS05280 PF18269 T3SS EscN ATPase C-terminal domain EPB55_RS05290 PF14841 FliG middle domain EPB55_RS05290 PF01706 FliG C-terminal domain EPB55_RS05290 PF14842 FliG N-terminal domain EPB55_RS05295 PF01514 Secretory protein of YscJ/FliF family EPB55_RS05295 PF08345 Flagellar M-ring protein C-terminal EPB55_RS05300 PF02049 Flagellar hook-basal body complex protein FliE EPB55_RS05305 PF00158 Sigma-54 interaction domain EPB55_RS05305 PF00072 Response regulator receiver domain EPB55_RS05305 PF02954 Bacterial regulatory protein, Fis family EPB55_RS05310 PF13188 PAS domain EPB55_RS05310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS05310 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS05315 PF06490 Flagellar regulatory protein FleQ EPB55_RS05315 PF02954 Bacterial regulatory protein, Fis family EPB55_RS05315 PF00158 Sigma-54 interaction domain EPB55_RS05320 PF02561 Flagellar protein FliS EPB55_RS05330 PF02465 Flagellar hook-associated protein 2 N-terminus EPB55_RS05330 PF07195 Flagellar hook-associated protein 2 C-terminus EPB55_RS05330 PF07196 Flagellin hook IN motif EPB55_RS05335 PF03646 FlaG protein EPB55_RS05340 PF00700 Bacterial flagellin C-terminal helical region EPB55_RS05340 PF07196 Flagellin hook IN motif EPB55_RS05340 PF00669 Bacterial flagellin N-terminal helical region EPB55_RS05345 PF00700 Bacterial flagellin C-terminal helical region EPB55_RS05345 PF00669 Bacterial flagellin N-terminal helical region EPB55_RS05345 PF07196 Flagellin hook IN motif EPB55_RS05350 PF00700 Bacterial flagellin C-terminal helical region EPB55_RS05350 PF07196 Flagellin hook IN motif EPB55_RS05350 PF00669 Bacterial flagellin N-terminal helical region EPB55_RS05355 PF04261 Dyp-type peroxidase family EPB55_RS05380 PF03960 ArsC family EPB55_RS05385 PF07687 Peptidase dimerisation domain EPB55_RS05385 PF01546 Peptidase family M20/M25/M40 EPB55_RS05400 PF06804 NlpB/DapX lipoprotein EPB55_RS05405 PF00701 Dihydrodipicolinate synthetase family EPB55_RS05410 PF01842 ACT domain EPB55_RS05415 PF00578 AhpC/TSA family EPB55_RS05420 PF01594 AI-2E family transporter EPB55_RS05430 PF01435 Peptidase family M48 EPB55_RS05430 PF13181 Tetratricopeptide repeat EPB55_RS05435 PF03960 ArsC family EPB55_RS05440 PF03358 NADPH-dependent FMN reductase EPB55_RS05455 PF00860 Permease family EPB55_RS05465 PF00586 AIR synthase related protein, N-terminal domain EPB55_RS05465 PF02769 AIR synthase related protein, C-terminal domain EPB55_RS05470 PF00551 Formyl transferase EPB55_RS05475 PF13230 Glutamine amidotransferases class-II EPB55_RS05480 PF13580 SIS domain EPB55_RS05485 PF02770 Acyl-CoA dehydrogenase, middle domain EPB55_RS05485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EPB55_RS05485 PF09317 Domain of unknown function (DUF1974) EPB55_RS05485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EPB55_RS05515 PF00999 Sodium/hydrogen exchanger family EPB55_RS05515 PF02254 TrkA-N domain EPB55_RS05520 PF02525 Flavodoxin-like fold EPB55_RS05530 PF00929 Exonuclease EPB55_RS05535 PF00075 RNase H EPB55_RS05540 PF08241 Methyltransferase domain EPB55_RS05545 PF16123 Hydroxyacylglutathione hydrolase C-terminus EPB55_RS05545 PF00753 Metallo-beta-lactamase superfamily EPB55_RS05550 PF01476 LysM domain EPB55_RS05550 PF01464 Transglycosylase SLT domain EPB55_RS05560 PF03372 Endonuclease/Exonuclease/phosphatase family EPB55_RS05565 PF00543 Nitrogen regulatory protein P-II EPB55_RS05570 PF00034 Cytochrome c EPB55_RS05575 PF09179 TilS substrate binding domain EPB55_RS05575 PF01171 PP-loop family EPB55_RS05575 PF11734 TilS substrate C-terminal domain EPB55_RS05580 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EPB55_RS05585 PF07733 Bacterial DNA polymerase III alpha NTPase domain EPB55_RS05585 PF01336 OB-fold nucleic acid binding domain EPB55_RS05585 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EPB55_RS05585 PF14579 Helix-hairpin-helix motif EPB55_RS05585 PF02811 PHP domain EPB55_RS05590 PF01351 Ribonuclease HII EPB55_RS05595 PF02684 Lipid-A-disaccharide synthetase EPB55_RS05600 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EPB55_RS05600 PF00132 Bacterial transferase hexapeptide (six repeats) EPB55_RS05605 PF07977 FabA-like domain EPB55_RS05610 PF00132 Bacterial transferase hexapeptide (six repeats) EPB55_RS05610 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EPB55_RS05610 PF14602 Hexapeptide repeat of succinyl-transferase EPB55_RS05615 PF03938 Outer membrane protein (OmpH-like) EPB55_RS05620 PF07244 Surface antigen variable number repeat EPB55_RS05620 PF01103 Surface antigen EPB55_RS05625 PF17820 PDZ domain EPB55_RS05625 PF02163 Peptidase family M50 EPB55_RS05630 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EPB55_RS05630 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EPB55_RS05630 PF13288 DXP reductoisomerase C-terminal domain EPB55_RS05640 PF01255 Putative undecaprenyl diphosphate synthase EPB55_RS05645 PF01765 Ribosome recycling factor EPB55_RS05650 PF00696 Amino acid kinase family EPB55_RS05655 PF00889 Elongation factor TS EPB55_RS05660 PF00318 Ribosomal protein S2 EPB55_RS05665 PF00557 Metallopeptidase family M24 EPB55_RS05670 PF01909 Nucleotidyltransferase domain EPB55_RS05670 PF01966 HD domain EPB55_RS05670 PF08335 GlnD PII-uridylyltransferase EPB55_RS05675 PF11944 Protein of unknown function (DUF3461) EPB55_RS05680 PF00849 RNA pseudouridylate synthase EPB55_RS05685 PF04287 tRNA pseudouridine synthase C EPB55_RS05715 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EPB55_RS05725 PF01370 NAD dependent epimerase/dehydratase family EPB55_RS05745 PF03806 AbgT putative transporter family EPB55_RS05750 PF00444 Ribosomal protein L36 EPB55_RS05755 PF01197 Ribosomal protein L31 EPB55_RS05760 PF18389 TrmO C-terminal domain EPB55_RS05760 PF01980 tRNA-methyltransferase O EPB55_RS05765 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EPB55_RS05765 PF03129 Anticodon binding domain EPB55_RS05765 PF04073 Aminoacyl-tRNA editing domain EPB55_RS05775 PF06786 Uncharacterised protein family (UPF0253) EPB55_RS05785 PF00209 Sodium:neurotransmitter symporter family EPB55_RS05790 PF00041 Fibronectin type III domain EPB55_RS05790 PF00704 Glycosyl hydrolases family 18 EPB55_RS05800 PF16124 RecQ zinc-binding EPB55_RS05800 PF00570 HRDC domain EPB55_RS05800 PF09382 RQC domain EPB55_RS05800 PF00271 Helicase conserved C-terminal domain EPB55_RS05800 PF00270 DEAD/DEAH box helicase EPB55_RS05805 PF00817 impB/mucB/samB family EPB55_RS05805 PF11799 impB/mucB/samB family C-terminal domain EPB55_RS05810 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS05810 PF00072 Response regulator receiver domain EPB55_RS05820 PF02424 ApbE family EPB55_RS05825 PF00175 Oxidoreductase NAD-binding domain EPB55_RS05825 PF00111 2Fe-2S iron-sulfur cluster binding domain EPB55_RS05825 PF00970 Oxidoreductase FAD-binding domain EPB55_RS05830 PF02508 Rnf-Nqr subunit, membrane protein EPB55_RS05835 PF02508 Rnf-Nqr subunit, membrane protein EPB55_RS05840 PF04205 FMN-binding domain EPB55_RS05845 PF03116 NQR2, RnfD, RnfE family EPB55_RS05850 PF11973 NQRA C-terminal domain EPB55_RS05850 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) EPB55_RS05855 PF01722 BolA-like protein EPB55_RS05860 PF05175 Methyltransferase small domain EPB55_RS05870 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EPB55_RS05875 PF07690 Major Facilitator Superfamily EPB55_RS05885 PF04545 Sigma-70, region 4 EPB55_RS05885 PF04542 Sigma-70 region 2 EPB55_RS05900 PF02558 Ketopantoate reductase PanE/ApbA EPB55_RS05900 PF08546 Ketopantoate reductase PanE/ApbA C terminal EPB55_RS05905 PF01965 DJ-1/PfpI family EPB55_RS05910 PF00266 Aminotransferase class-V EPB55_RS05915 PF02657 Fe-S metabolism associated domain EPB55_RS05920 PF00899 ThiF family EPB55_RS05925 PF03562 MltA specific insert domain EPB55_RS05925 PF06725 3D domain EPB55_RS05935 PF00583 Acetyltransferase (GNAT) family EPB55_RS05935 PF00696 Amino acid kinase family EPB55_RS05945 PF13538 UvrD-like helicase C-terminal domain EPB55_RS05950 PF12705 PD-(D/E)XK nuclease superfamily EPB55_RS05950 PF13361 UvrD-like helicase C-terminal domain EPB55_RS05950 PF00580 UvrD/REP helicase N-terminal domain EPB55_RS05960 PF00884 Sulfatase EPB55_RS05960 PF11893 Domain of unknown function (DUF3413) EPB55_RS05970 PF03466 LysR substrate binding domain EPB55_RS05970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS05975 PF07130 YebG protein EPB55_RS05980 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle EPB55_RS05980 PF14602 Hexapeptide repeat of succinyl-transferase EPB55_RS05985 PF00230 Major intrinsic protein EPB55_RS05990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EPB55_RS05990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EPB55_RS05995 PF00455 DeoR C terminal sensor domain EPB55_RS05995 PF08220 DeoR-like helix-turn-helix domain EPB55_RS06000 PF01266 FAD dependent oxidoreductase EPB55_RS06000 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EPB55_RS06005 PF01544 CorA-like Mg2+ transporter protein EPB55_RS06015 PF18030 RimK PreATP-grasp domain EPB55_RS06015 PF08443 RimK-like ATP-grasp domain EPB55_RS06015 PF02080 TrkA-C domain EPB55_RS06035 PF01588 Putative tRNA binding domain EPB55_RS06040 PF00356 Bacterial regulatory proteins, lacI family EPB55_RS06045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS06045 PF00672 HAMP domain EPB55_RS06045 PF17200 Single Cache domain 2 EPB55_RS06060 PF00356 Bacterial regulatory proteins, lacI family EPB55_RS06065 PF01263 Aldose 1-epimerase EPB55_RS06070 PF00288 GHMP kinases N terminal domain EPB55_RS06070 PF10509 Galactokinase galactose-binding signature EPB55_RS06070 PF08544 GHMP kinases C terminal EPB55_RS06075 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain EPB55_RS06075 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain EPB55_RS06080 PF16363 GDP-mannose 4,6 dehydratase EPB55_RS06085 PF00356 Bacterial regulatory proteins, lacI family EPB55_RS06095 PF16353 Domain of unknown function(DUF4981) EPB55_RS06095 PF00703 Glycosyl hydrolases family 2 EPB55_RS06095 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EPB55_RS06095 PF02837 Glycosyl hydrolases family 2, sugar binding domain EPB55_RS06095 PF02929 Beta galactosidase small chain EPB55_RS06100 PF04074 YhcH/YjgK/YiaL EPB55_RS06105 PF13520 Amino acid permease EPB55_RS06110 PF13520 Amino acid permease EPB55_RS06115 PF01204 Trehalase EPB55_RS06125 PF03466 LysR substrate binding domain EPB55_RS06125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS06130 PF02417 Chromate transporter EPB55_RS06150 PF00437 Type II/IV secretion system protein EPB55_RS06180 PF00263 Bacterial type II and III secretion system protein EPB55_RS06180 PF04972 BON domain EPB55_RS06180 PF13629 Pilus formation protein N terminal region EPB55_RS06210 PF12833 Helix-turn-helix domain EPB55_RS06210 PF02311 AraC-like ligand binding domain EPB55_RS06215 PF00501 AMP-binding enzyme EPB55_RS06225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS06225 PF03466 LysR substrate binding domain EPB55_RS06230 PF03144 Elongation factor Tu domain 2 EPB55_RS06230 PF00009 Elongation factor Tu GTP binding domain EPB55_RS06230 PF00679 Elongation factor G C-terminus EPB55_RS06230 PF03764 Elongation factor G, domain IV EPB55_RS06230 PF14492 Elongation Factor G, domain II EPB55_RS06245 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS06245 PF00563 EAL domain EPB55_RS06245 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS06250 PF18073 Rubredoxin metal binding domain EPB55_RS06260 PF18429 Domain of unknown function (DUF5609) EPB55_RS06270 PF01048 Phosphorylase superfamily EPB55_RS06275 PF01676 Metalloenzyme superfamily EPB55_RS06280 PF02885 Glycosyl transferase family, helical bundle domain EPB55_RS06280 PF00591 Glycosyl transferase family, a/b domain EPB55_RS06280 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain EPB55_RS06285 PF01791 DeoC/LacD family aldolase EPB55_RS06290 PF07662 Na+ dependent nucleoside transporter C-terminus EPB55_RS06290 PF07670 Nucleoside recognition EPB55_RS06290 PF01773 Na+ dependent nucleoside transporter N-terminus EPB55_RS06295 PF01026 TatD related DNase EPB55_RS06300 PF00009 Elongation factor Tu GTP binding domain EPB55_RS06300 PF03144 Elongation factor Tu domain 2 EPB55_RS06300 PF16658 Class II release factor RF3, C-terminal domain EPB55_RS06305 PF08448 PAS fold EPB55_RS06305 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS06310 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS06310 PF00563 EAL domain EPB55_RS06310 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS06315 PF00583 Acetyltransferase (GNAT) family EPB55_RS06325 PF13508 Acetyltransferase (GNAT) domain EPB55_RS06330 PF02036 SCP-2 sterol transfer family EPB55_RS06340 PF01136 Peptidase family U32 EPB55_RS06345 PF01136 Peptidase family U32 EPB55_RS06350 PF01554 MatE EPB55_RS06360 PF07719 Tetratricopeptide repeat EPB55_RS06360 PF13181 Tetratricopeptide repeat EPB55_RS06365 PF00575 S1 RNA binding domain EPB55_RS06365 PF03725 3' exoribonuclease family, domain 2 EPB55_RS06365 PF01138 3' exoribonuclease family, domain 1 EPB55_RS06365 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EPB55_RS06365 PF00013 KH domain EPB55_RS06385 PF00312 Ribosomal protein S15 EPB55_RS06390 PF16198 tRNA pseudouridylate synthase B C-terminal domain EPB55_RS06390 PF01509 TruB family pseudouridylate synthase (N terminal domain) EPB55_RS06390 PF09157 Pseudouridine synthase II TruB, C-terminal EPB55_RS06395 PF02033 Ribosome-binding factor A EPB55_RS06400 PF04760 Translation initiation factor IF-2, N-terminal region EPB55_RS06400 PF08364 Bacterial translation initiation factor IF-2 associated region EPB55_RS06400 PF11987 Translation-initiation factor 2 EPB55_RS06400 PF00009 Elongation factor Tu GTP binding domain EPB55_RS06405 PF00575 S1 RNA binding domain EPB55_RS06405 PF08529 NusA N-terminal domain EPB55_RS06405 PF13184 NusA-like KH domain EPB55_RS06410 PF17384 RimP C-terminal SH3 domain EPB55_RS06410 PF02576 RimP N-terminal domain EPB55_RS06425 PF03840 Preprotein translocase SecG subunit EPB55_RS06430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EPB55_RS06430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EPB55_RS06430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EPB55_RS06430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EPB55_RS06435 PF00809 Pterin binding enzyme EPB55_RS06440 PF00004 ATPase family associated with various cellular activities (AAA) EPB55_RS06440 PF17862 AAA+ lid domain EPB55_RS06440 PF01434 Peptidase family M41 EPB55_RS06440 PF06480 FtsH Extracellular EPB55_RS06445 PF01728 FtsJ-like methyltransferase EPB55_RS06450 PF01985 CRS1 / YhbY (CRM) domain EPB55_RS06455 PF03449 Transcription elongation factor, N-terminal EPB55_RS06455 PF01272 Transcription elongation factor, GreA/GreB, C-term EPB55_RS06460 PF13609 Gram-negative porin EPB55_RS06465 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family EPB55_RS06470 PF04304 Protein of unknown function (DUF454) EPB55_RS06475 PF00579 tRNA synthetases class I (W and Y) EPB55_RS06480 PF01551 Peptidase family M23 EPB55_RS06480 PF04225 Opacity-associated protein A LysM-like domain EPB55_RS06485 PF00873 AcrB/AcrD/AcrF family EPB55_RS06490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EPB55_RS06495 PF01521 Iron-sulphur cluster biosynthesis EPB55_RS06500 PF00202 Aminotransferase class-III EPB55_RS06505 PF01594 AI-2E family transporter EPB55_RS06510 PF05175 Methyltransferase small domain EPB55_RS06510 PF08468 Methyltransferase small domain N-terminal EPB55_RS06515 PF09308 LuxQ, periplasmic EPB55_RS06515 PF00072 Response regulator receiver domain EPB55_RS06515 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS06515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS06520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPB55_RS06525 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS06530 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS06530 PF12911 N-terminal TM domain of oligopeptide transport permease C EPB55_RS06535 PF00005 ABC transporter EPB55_RS06535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB55_RS06540 PF00005 ABC transporter EPB55_RS06540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB55_RS06550 PF01869 BadF/BadG/BcrA/BcrD ATPase family EPB55_RS06555 PF02838 Glycosyl hydrolase family 20, domain 2 EPB55_RS06555 PF00728 Glycosyl hydrolase family 20, catalytic domain EPB55_RS06560 PF06165 Glycosyltransferase family 36 EPB55_RS06560 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain EPB55_RS06565 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EPB55_RS06565 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EPB55_RS06565 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EPB55_RS06565 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EPB55_RS06570 PF08402 TOBE domain EPB55_RS06570 PF00005 ABC transporter EPB55_RS06580 PF13416 Bacterial extracellular solute-binding protein EPB55_RS06585 PF00909 Ammonium Transporter Family EPB55_RS06590 PF00543 Nitrogen regulatory protein P-II EPB55_RS06595 PF06062 Uncharacterised protein family (UPF0231) EPB55_RS06600 PF05651 Putative sugar diacid recognition EPB55_RS06600 PF13556 PucR C-terminal helix-turn-helix domain EPB55_RS06600 PF17853 GGDEF-like domain EPB55_RS06605 PF02447 GntP family permease EPB55_RS06610 PF02595 Glycerate kinase family EPB55_RS06615 PF11791 Aconitate B N-terminal domain EPB55_RS06615 PF00330 Aconitase family (aconitate hydratase) EPB55_RS06615 PF06434 Aconitate hydratase 2 N-terminus EPB55_RS06620 PF01734 Patatin-like phospholipase EPB55_RS06625 PF14814 Bifunctional transglycosylase second domain EPB55_RS06625 PF00905 Penicillin binding protein transpeptidase domain EPB55_RS06625 PF00912 Transglycosylase EPB55_RS06630 PF00270 DEAD/DEAH box helicase EPB55_RS06630 PF04408 Helicase associated domain (HA2) EPB55_RS06630 PF00271 Helicase conserved C-terminal domain EPB55_RS06630 PF08482 ATP-dependent helicase C-terminal EPB55_RS06635 PF03749 Sugar fermentation stimulation protein RE domain EPB55_RS06635 PF17746 SfsA N-terminal OB domain EPB55_RS06640 PF01258 Prokaryotic dksA/traR C4-type zinc finger EPB55_RS06645 PF00749 tRNA synthetases class I (E and Q), catalytic domain EPB55_RS06650 PF01743 Poly A polymerase head domain EPB55_RS06650 PF12627 Probable RNA and SrmB- binding site of polymerase A EPB55_RS06650 PF12626 Polymerase A arginine-rich C-terminus EPB55_RS06655 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EPB55_RS06660 PF02548 Ketopantoate hydroxymethyltransferase EPB55_RS06665 PF02569 Pantoate-beta-alanine ligase EPB55_RS06670 PF01061 ABC-2 type transporter EPB55_RS06675 PF00005 ABC transporter EPB55_RS06680 PF00916 Sulfate permease family EPB55_RS06680 PF01740 STAS domain EPB55_RS06685 PF00484 Carbonic anhydrase EPB55_RS06690 PF00156 Phosphoribosyl transferase domain EPB55_RS06695 PF00440 Bacterial regulatory proteins, tetR family EPB55_RS06700 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB55_RS06700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPB55_RS06705 PF02817 e3 binding domain EPB55_RS06705 PF00364 Biotin-requiring enzyme EPB55_RS06705 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EPB55_RS06710 PF17831 Pyruvate dehydrogenase E1 component middle domain EPB55_RS06710 PF00456 Transketolase, thiamine diphosphate binding domain EPB55_RS06715 PF07729 FCD domain EPB55_RS06715 PF00392 Bacterial regulatory proteins, gntR family EPB55_RS06720 PF01510 N-acetylmuramoyl-L-alanine amidase EPB55_RS06725 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EPB55_RS06725 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EPB55_RS06730 PF07963 Prokaryotic N-terminal methylation motif EPB55_RS06730 PF00114 Pilin (bacterial filament) EPB55_RS06735 PF00437 Type II/IV secretion system protein EPB55_RS06735 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EPB55_RS06740 PF00482 Type II secretion system (T2SS), protein F EPB55_RS06745 PF06750 Bacterial Peptidase A24 N-terminal domain EPB55_RS06745 PF01478 Type IV leader peptidase family EPB55_RS06750 PF01121 Dephospho-CoA kinase EPB55_RS06755 PF07072 Cell division protein EPB55_RS06760 PF03884 DNA gyrase inhibitor YacG EPB55_RS06765 PF01245 Ribosomal protein L19 EPB55_RS06770 PF01746 tRNA (Guanine-1)-methyltransferase EPB55_RS06775 PF01782 RimM N-terminal domain EPB55_RS06775 PF05239 PRC-barrel domain EPB55_RS06780 PF00886 Ribosomal protein S16 EPB55_RS06785 PF02881 SRP54-type protein, helical bundle domain EPB55_RS06785 PF02978 Signal peptide binding domain EPB55_RS06785 PF00448 SRP54-type protein, GTPase domain EPB55_RS06790 PF01578 Cytochrome C assembly protein EPB55_RS06795 PF03471 Transporter associated domain EPB55_RS06795 PF01595 Cyclin M transmembrane N-terminal domain EPB55_RS06795 PF00571 CBS domain EPB55_RS06800 PF02664 S-Ribosylhomocysteinase (LuxS) EPB55_RS06810 PF04262 Glutamate-cysteine ligase EPB55_RS06815 PF05193 Peptidase M16 inactive domain EPB55_RS06815 PF00675 Insulinase (Peptidase family M16) EPB55_RS06820 PF09335 SNARE associated Golgi protein EPB55_RS06825 PF08240 Alcohol dehydrogenase GroES-like domain EPB55_RS06825 PF00107 Zinc-binding dehydrogenase EPB55_RS06830 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit EPB55_RS06835 PF00364 Biotin-requiring enzyme EPB55_RS06835 PF00682 HMGL-like EPB55_RS06835 PF02436 Conserved carboxylase domain EPB55_RS06840 PF04277 Oxaloacetate decarboxylase, gamma chain EPB55_RS06885 PF02599 Global regulator protein family EPB55_RS06890 PF00696 Amino acid kinase family EPB55_RS06890 PF13840 ACT domain EPB55_RS06890 PF01842 ACT domain EPB55_RS06895 PF02272 DHHA1 domain EPB55_RS06895 PF01411 tRNA synthetases class II (A) EPB55_RS06895 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EPB55_RS06900 PF02631 RecX family EPB55_RS06905 PF00154 recA bacterial DNA recombination protein EPB55_RS06910 PF02464 Competence-damaged protein EPB55_RS06915 PF05192 MutS domain III EPB55_RS06915 PF05190 MutS family domain IV EPB55_RS06915 PF01624 MutS domain I EPB55_RS06915 PF00488 MutS domain V EPB55_RS06915 PF05188 MutS domain II EPB55_RS06920 PF04542 Sigma-70 region 2 EPB55_RS06920 PF04539 Sigma-70 region 3 EPB55_RS06920 PF00140 Sigma-70 factor, region 1.2 EPB55_RS06920 PF04545 Sigma-70, region 4 EPB55_RS06925 PF01476 LysM domain EPB55_RS06925 PF01551 Peptidase family M23 EPB55_RS06935 PF01975 Survival protein SurE EPB55_RS06940 PF01142 tRNA pseudouridine synthase D (TruD) EPB55_RS06945 PF02542 YgbB family EPB55_RS06950 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EPB55_RS06955 PF04977 Septum formation initiator EPB55_RS06960 PF03952 Enolase, N-terminal domain EPB55_RS06960 PF00113 Enolase, C-terminal TIM barrel domain EPB55_RS06965 PF06418 CTP synthase N-terminus EPB55_RS06965 PF00117 Glutamine amidotransferase class-I EPB55_RS06970 PF03819 MazG nucleotide pyrophosphohydrolase domain EPB55_RS06975 PF02824 TGS domain EPB55_RS06975 PF04607 Region found in RelA / SpoT proteins EPB55_RS06975 PF13291 ACT domain EPB55_RS06980 PF01938 TRAM domain EPB55_RS06980 PF05958 tRNA (Uracil-5-)-methyltransferase EPB55_RS06985 PF00672 HAMP domain EPB55_RS06985 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS06985 PF01627 Hpt domain EPB55_RS06985 PF00072 Response regulator receiver domain EPB55_RS06985 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EPB55_RS06985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS06990 PF00563 EAL domain EPB55_RS06990 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS06990 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS07005 PF01648 4'-phosphopantetheinyl transferase superfamily EPB55_RS07010 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EPB55_RS07015 PF02565 Recombination protein O C terminal EPB55_RS07015 PF11967 Recombination protein O N terminal EPB55_RS07020 PF01926 50S ribosome-binding GTPase EPB55_RS07020 PF07650 KH domain EPB55_RS07025 PF14622 Ribonuclease-III-like EPB55_RS07025 PF00035 Double-stranded RNA binding motif EPB55_RS07030 PF10502 Signal peptidase, peptidase S26 EPB55_RS07035 PF06421 GTP-binding protein LepA C-terminus EPB55_RS07035 PF03144 Elongation factor Tu domain 2 EPB55_RS07035 PF00009 Elongation factor Tu GTP binding domain EPB55_RS07035 PF00679 Elongation factor G C-terminus EPB55_RS07045 PF17188 MucB/RseB C-terminal domain EPB55_RS07045 PF03888 MucB/RseB N-terminal domain EPB55_RS07050 PF03872 Anti sigma-E protein RseA, N-terminal domain EPB55_RS07050 PF03873 Anti sigma-E protein RseA, C-terminal domain EPB55_RS07055 PF08281 Sigma-70, region 4 EPB55_RS07055 PF04542 Sigma-70 region 2 EPB55_RS07060 PF02910 Fumarate reductase flavoprotein C-term EPB55_RS07060 PF00890 FAD binding domain EPB55_RS07070 PF03937 Flavinator of succinate dehydrogenase EPB55_RS07075 PF01571 Aminomethyltransferase folate-binding domain EPB55_RS07090 PF01494 FAD binding domain EPB55_RS07095 PF01494 FAD binding domain EPB55_RS07100 PF03695 Uncharacterised protein family (UPF0149) EPB55_RS07105 PF05164 Cell division protein ZapA EPB55_RS07115 PF01812 5-formyltetrahydrofolate cyclo-ligase family EPB55_RS07120 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EPB55_RS07125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EPB55_RS07125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EPB55_RS07125 PF01842 ACT domain EPB55_RS07135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS07135 PF03466 LysR substrate binding domain EPB55_RS07140 PF01810 LysE type translocator EPB55_RS07145 PF05552 Conserved TM helix EPB55_RS07145 PF00924 Mechanosensitive ion channel EPB55_RS07150 PF01116 Fructose-bisphosphate aldolase class-II EPB55_RS07155 PF00162 Phosphoglycerate kinase EPB55_RS07160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EPB55_RS07160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EPB55_RS07170 PF02780 Transketolase, C-terminal domain EPB55_RS07170 PF00456 Transketolase, thiamine diphosphate binding domain EPB55_RS07170 PF02779 Transketolase, pyrimidine binding domain EPB55_RS07175 PF02773 S-adenosylmethionine synthetase, C-terminal domain EPB55_RS07175 PF02772 S-adenosylmethionine synthetase, central domain EPB55_RS07175 PF00438 S-adenosylmethionine synthetase, N-terminal domain EPB55_RS07185 PF10263 SprT-like family EPB55_RS07185 PF17283 SprT-like zinc ribbon domain EPB55_RS07190 PF04231 Endonuclease I EPB55_RS07200 PF04452 RNA methyltransferase EPB55_RS07205 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EPB55_RS07205 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EPB55_RS07210 PF02622 Uncharacterized ACR, COG1678 EPB55_RS07215 PF03652 Holliday junction resolvase EPB55_RS07220 PF00437 Type II/IV secretion system protein EPB55_RS07225 PF00437 Type II/IV secretion system protein EPB55_RS07230 PF01168 Alanine racemase, N-terminal domain EPB55_RS07235 PF03807 NADP oxidoreductase coenzyme F420-dependent EPB55_RS07235 PF14748 Pyrroline-5-carboxylate reductase dimerisation EPB55_RS07240 PF02325 YGGT family EPB55_RS07245 PF02594 Uncharacterised ACR, YggU family COG1872 EPB55_RS07255 PF01725 Ham1 family EPB55_RS07260 PF04055 Radical SAM superfamily EPB55_RS07260 PF06969 HemN C-terminal domain EPB55_RS07270 PF04960 Glutaminase EPB55_RS07275 PF02390 Putative methyltransferase EPB55_RS07280 PF14815 NUDIX domain EPB55_RS07280 PF00730 HhH-GPD superfamily base excision DNA repair protein EPB55_RS07280 PF00633 Helix-hairpin-helix motif EPB55_RS07285 PF04362 Bacterial Fe(2+) trafficking EPB55_RS07290 PF01464 Transglycosylase SLT domain EPB55_RS07290 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain EPB55_RS07310 PF17200 Single Cache domain 2 EPB55_RS07310 PF00672 HAMP domain EPB55_RS07310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS07400 PF00072 Response regulator receiver domain EPB55_RS07410 PF00356 Bacterial regulatory proteins, lacI family EPB55_RS07415 PF04794 YdjC-like protein EPB55_RS07420 PF02056 Family 4 glycosyl hydrolase EPB55_RS07420 PF11975 Family 4 glycosyl hydrolase C-terminal domain EPB55_RS07425 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit EPB55_RS07430 PF02378 Phosphotransferase system, EIIC EPB55_RS07435 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPB55_RS07440 PF01522 Polysaccharide deacetylase EPB55_RS07455 PF03739 Lipopolysaccharide export system permease LptF/LptG EPB55_RS07460 PF03739 Lipopolysaccharide export system permease LptF/LptG EPB55_RS07465 PF00883 Cytosol aminopeptidase family, catalytic domain EPB55_RS07465 PF02789 Cytosol aminopeptidase family, N-terminal domain EPB55_RS07470 PF04364 DNA polymerase III chi subunit, HolC EPB55_RS07475 PF08264 Anticodon-binding domain of tRNA EPB55_RS07475 PF00133 tRNA synthetases class I (I, L, M and V) EPB55_RS07475 PF10458 Valyl tRNA synthetase tRNA binding arm EPB55_RS07485 PF00583 Acetyltransferase (GNAT) family EPB55_RS07495 PF06877 Regulator of ribonuclease activity B EPB55_RS07505 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EPB55_RS07505 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EPB55_RS07510 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EPB55_RS07510 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EPB55_RS07515 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain EPB55_RS07515 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain EPB55_RS07520 PF01042 Endoribonuclease L-PSP EPB55_RS07525 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EPB55_RS07525 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EPB55_RS07530 PF00849 RNA pseudouridylate synthase EPB55_RS07535 PF00176 SNF2 family N-terminal domain EPB55_RS07535 PF18337 RapA N-terminal Tudor like domain EPB55_RS07535 PF18339 RapA N-terminal Tudor like domain 1 EPB55_RS07535 PF12137 RNA polymerase recycling family C-terminal EPB55_RS07535 PF00271 Helicase conserved C-terminal domain EPB55_RS07540 PF13638 PIN domain EPB55_RS07540 PF02562 PhoH-like protein EPB55_RS07545 PF01523 Putative modulator of DNA gyrase EPB55_RS07550 PF00795 Carbon-nitrogen hydrolase EPB55_RS07555 PF13502 AsmA-like C-terminal region EPB55_RS07555 PF13116 Protein of unknown function EPB55_RS07560 PF10150 Ribonuclease E/G family EPB55_RS07560 PF00575 S1 RNA binding domain EPB55_RS07565 PF02545 Maf-like protein EPB55_RS07570 PF04093 rod shape-determining protein MreD EPB55_RS07575 PF04085 rod shape-determining protein MreC EPB55_RS07610 PF07963 Prokaryotic N-terminal methylation motif EPB55_RS07610 PF00114 Pilin (bacterial filament) EPB55_RS07615 PF07963 Prokaryotic N-terminal methylation motif EPB55_RS07625 PF00482 Type II secretion system (T2SS), protein F EPB55_RS07630 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EPB55_RS07630 PF00437 Type II/IV secretion system protein EPB55_RS07640 PF01471 Putative peptidoglycan binding domain EPB55_RS07640 PF13401 AAA domain EPB55_RS07645 PF11741 AMIN domain EPB55_RS07645 PF00263 Bacterial type II and III secretion system protein EPB55_RS07645 PF07660 Secretin and TonB N terminus short domain EPB55_RS07645 PF03958 Bacterial type II/III secretion system short domain EPB55_RS07665 PF00563 EAL domain EPB55_RS07665 PF17157 Gammaproteobacterial periplasmic sensor domain EPB55_RS07665 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS07670 PF00436 Single-strand binding protein family EPB55_RS07675 PF00196 Bacterial regulatory proteins, luxR family EPB55_RS07680 PF00483 Nucleotidyl transferase EPB55_RS07685 PF17760 UvrA interaction domain EPB55_RS07685 PF17755 UvrA DNA-binding domain EPB55_RS07685 PF00005 ABC transporter EPB55_RS07695 PF00266 Aminotransferase class-V EPB55_RS07700 PF01842 ACT domain EPB55_RS07700 PF00696 Amino acid kinase family EPB55_RS07705 PF02310 B12 binding domain EPB55_RS07705 PF02607 B12 binding domain EPB55_RS07705 PF02965 Vitamin B12 dependent methionine synthase, activation domain EPB55_RS07705 PF00809 Pterin binding enzyme EPB55_RS07705 PF02574 Homocysteine S-methyltransferase EPB55_RS07710 PF00999 Sodium/hydrogen exchanger family EPB55_RS07715 PF00072 Response regulator receiver domain EPB55_RS07715 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS07780 PF01507 Phosphoadenosine phosphosulfate reductase family EPB55_RS07785 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EPB55_RS07785 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EPB55_RS07790 PF00667 FAD binding domain EPB55_RS07790 PF00258 Flavodoxin EPB55_RS07790 PF00175 Oxidoreductase NAD-binding domain EPB55_RS07810 PF01207 Dihydrouridine synthase (Dus) EPB55_RS07815 PF01475 Ferric uptake regulator family EPB55_RS07825 PF00342 Phosphoglucose isomerase EPB55_RS07830 PF01894 Uncharacterised protein family UPF0047 EPB55_RS07840 PF00842 Alanine racemase, C-terminal domain EPB55_RS07840 PF01168 Alanine racemase, N-terminal domain EPB55_RS07845 PF00772 DnaB-like helicase N terminal domain EPB55_RS07845 PF03796 DnaB-like helicase C terminal domain EPB55_RS07855 PF01281 Ribosomal protein L9, N-terminal domain EPB55_RS07855 PF03948 Ribosomal protein L9, C-terminal domain EPB55_RS07860 PF01084 Ribosomal protein S18 EPB55_RS07865 PF00436 Single-strand binding protein family EPB55_RS07870 PF01250 Ribosomal protein S6 EPB55_RS07875 PF00834 Ribulose-phosphate 3 epimerase family EPB55_RS07880 PF02086 D12 class N6 adenine-specific DNA methyltransferase EPB55_RS07895 PF01202 Shikimate kinase EPB55_RS07900 PF00263 Bacterial type II and III secretion system protein EPB55_RS07900 PF07660 Secretin and TonB N terminus short domain EPB55_RS07900 PF03958 Bacterial type II/III secretion system short domain EPB55_RS07900 PF11741 AMIN domain EPB55_RS07925 PF00912 Transglycosylase EPB55_RS07925 PF00905 Penicillin binding protein transpeptidase domain EPB55_RS07925 PF17092 Penicillin-binding protein OB-like domain EPB55_RS07930 PF03466 LysR substrate binding domain EPB55_RS07930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS07940 PF00583 Acetyltransferase (GNAT) family EPB55_RS07940 PF00206 Lyase EPB55_RS07940 PF14698 Argininosuccinate lyase C-terminal EPB55_RS07945 PF00764 Arginosuccinate synthase EPB55_RS07950 PF00696 Amino acid kinase family EPB55_RS07955 PF01118 Semialdehyde dehydrogenase, NAD binding domain EPB55_RS07955 PF02774 Semialdehyde dehydrogenase, dimerisation domain EPB55_RS07960 PF01546 Peptidase family M20/M25/M40 EPB55_RS07960 PF07687 Peptidase dimerisation domain EPB55_RS07965 PF00311 Phosphoenolpyruvate carboxylase EPB55_RS07975 PF02219 Methylenetetrahydrofolate reductase EPB55_RS07980 PF00696 Amino acid kinase family EPB55_RS07980 PF00742 Homoserine dehydrogenase EPB55_RS07980 PF03447 Homoserine dehydrogenase, NAD binding domain EPB55_RS07985 PF01053 Cys/Met metabolism PLP-dependent enzyme EPB55_RS07990 PF01340 Met Apo-repressor, MetJ EPB55_RS07995 PF00390 Malic enzyme, N-terminal domain EPB55_RS07995 PF03949 Malic enzyme, NAD binding domain EPB55_RS08000 PF01197 Ribosomal protein L31 EPB55_RS08010 PF00356 Bacterial regulatory proteins, lacI family EPB55_RS08020 PF00227 Proteasome subunit EPB55_RS08025 PF00004 ATPase family associated with various cellular activities (AAA) EPB55_RS08025 PF07724 AAA domain (Cdc48 subfamily) EPB55_RS08025 PF10431 C-terminal, D2-small domain, of ClpB protein EPB55_RS08030 PF01040 UbiA prenyltransferase family EPB55_RS08035 PF03737 Aldolase/RraA EPB55_RS08040 PF06005 Cell division protein ZapB EPB55_RS08045 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded EPB55_RS08070 PF00121 Triosephosphate isomerase EPB55_RS08075 PF16363 GDP-mannose 4,6 dehydratase EPB55_RS08080 PF00210 Ferritin-like domain EPB55_RS08085 PF04324 BFD-like [2Fe-2S] binding domain EPB55_RS08090 PF00009 Elongation factor Tu GTP binding domain EPB55_RS08090 PF03144 Elongation factor Tu domain 2 EPB55_RS08090 PF03143 Elongation factor Tu C-terminal domain EPB55_RS08095 PF00679 Elongation factor G C-terminus EPB55_RS08095 PF03144 Elongation factor Tu domain 2 EPB55_RS08095 PF00009 Elongation factor Tu GTP binding domain EPB55_RS08095 PF03764 Elongation factor G, domain IV EPB55_RS08095 PF14492 Elongation Factor G, domain II EPB55_RS08100 PF00177 Ribosomal protein S7p/S5e EPB55_RS08105 PF00164 Ribosomal protein S12/S23 EPB55_RS08110 PF04077 DsrH like protein EPB55_RS08115 PF02635 DsrE/DsrF-like family EPB55_RS08120 PF02635 DsrE/DsrF-like family EPB55_RS08125 PF08348 YheO-like PAS domain EPB55_RS08125 PF13309 HTH domain EPB55_RS08130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EPB55_RS08130 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EPB55_RS08140 PF04102 SlyX EPB55_RS08145 PF01112 Asparaginase EPB55_RS08150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EPB55_RS08160 PF02254 TrkA-N domain EPB55_RS08160 PF00999 Sodium/hydrogen exchanger family EPB55_RS08165 PF02525 Flavodoxin-like fold EPB55_RS08170 PF12848 ABC transporter EPB55_RS08170 PF00005 ABC transporter EPB55_RS08180 PF00561 alpha/beta hydrolase fold EPB55_RS08185 PF06794 Uncharacterised protein family (UPF0270) EPB55_RS08190 PF00485 Phosphoribulokinase / Uridine kinase family EPB55_RS08195 PF00027 Cyclic nucleotide-binding domain EPB55_RS08195 PF13545 Crp-like helix-turn-helix domain EPB55_RS08205 PF00171 Aldehyde dehydrogenase family EPB55_RS08210 PF04958 Arginine N-succinyltransferase beta subunit EPB55_RS08215 PF00202 Aminotransferase class-III EPB55_RS08220 PF00117 Glutamine amidotransferase class-I EPB55_RS08235 PF00579 tRNA synthetases class I (W and Y) EPB55_RS08240 PF13419 Haloacid dehalogenase-like hydrolase EPB55_RS08245 PF00588 SpoU rRNA Methylase family EPB55_RS08245 PF08032 RNA 2'-O ribose methyltransferase substrate binding EPB55_RS08250 PF00575 S1 RNA binding domain EPB55_RS08250 PF00773 RNB domain EPB55_RS08250 PF08206 Ribonuclease B OB domain EPB55_RS08250 PF08461 Ribonuclease R winged-helix domain EPB55_RS08250 PF17876 Cold shock domain EPB55_RS08255 PF01979 Amidohydrolase family EPB55_RS08260 PF02082 Transcriptional regulator EPB55_RS08265 PF00042 Globin EPB55_RS08265 PF00175 Oxidoreductase NAD-binding domain EPB55_RS08265 PF00970 Oxidoreductase FAD-binding domain EPB55_RS08270 PF08238 Sel1 repeat EPB55_RS08275 PF00709 Adenylosuccinate synthetase EPB55_RS08280 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) EPB55_RS08285 PF01145 SPFH domain / Band 7 family EPB55_RS08290 PF12221 Bacterial membrane protein N terminal EPB55_RS08290 PF01145 SPFH domain / Band 7 family EPB55_RS08295 PF16360 GTP-binding GTPase Middle Region EPB55_RS08295 PF13167 GTP-binding GTPase N-terminal EPB55_RS08295 PF01926 50S ribosome-binding GTPase EPB55_RS08300 PF17209 Hfq protein EPB55_RS08310 PF01119 DNA mismatch repair protein, C-terminal domain EPB55_RS08310 PF08676 MutL C terminal dimerisation domain EPB55_RS08315 PF01520 N-acetylmuramoyl-L-alanine amidase EPB55_RS08320 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EPB55_RS08325 PF08331 Domain of unknown function (DUF1730) EPB55_RS08385 PF00929 Exonuclease EPB55_RS08390 PF03193 RsgA GTPase EPB55_RS08395 PF02666 Phosphatidylserine decarboxylase EPB55_RS08400 PF00939 Sodium:sulfate symporter transmembrane region EPB55_RS08410 PF01676 Metalloenzyme superfamily EPB55_RS08410 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EPB55_RS08420 PF00581 Rhodanese-like domain EPB55_RS08425 PF02556 Preprotein translocase subunit SecB EPB55_RS08430 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EPB55_RS08430 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EPB55_RS08435 PF06426 Serine acetyltransferase, N-terminal EPB55_RS08435 PF00132 Bacterial transferase hexapeptide (six repeats) EPB55_RS08440 PF01551 Peptidase family M23 EPB55_RS08450 PF08360 QacR-like protein, C-terminal region EPB55_RS08450 PF00440 Bacterial regulatory proteins, tetR family EPB55_RS08460 PF00152 tRNA synthetases class II (D, K and N) EPB55_RS08465 PF02910 Fumarate reductase flavoprotein C-term EPB55_RS08465 PF00890 FAD binding domain EPB55_RS08470 PF13085 2Fe-2S iron-sulfur cluster binding domain EPB55_RS08470 PF13183 4Fe-4S dicluster domain EPB55_RS08475 PF02300 Fumarate reductase subunit C EPB55_RS08480 PF02313 Fumarate reductase subunit D EPB55_RS08490 PF09285 Elongation factor P, C-terminal EPB55_RS08490 PF01132 Elongation factor P (EF-P) OB domain EPB55_RS08490 PF08207 Elongation factor P (EF-P) KOW-like domain EPB55_RS08495 PF04055 Radical SAM superfamily EPB55_RS08500 PF02308 MgtC family EPB55_RS08510 PF00118 TCP-1/cpn60 chaperonin family EPB55_RS08515 PF00166 Chaperonin 10 Kd subunit EPB55_RS08520 PF01554 MatE EPB55_RS08525 PF00365 Phosphofructokinase EPB55_RS08530 PF01545 Cation efflux family EPB55_RS08530 PF16916 Dimerisation domain of Zinc Transporter EPB55_RS08535 PF07813 LTXXQ motif family protein EPB55_RS08540 PF00486 Transcriptional regulatory protein, C terminal EPB55_RS08540 PF00072 Response regulator receiver domain EPB55_RS08545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS08545 PF00672 HAMP domain EPB55_RS08545 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS08545 PF16527 Two-component sensor protein CpxA, periplasmic domain EPB55_RS08550 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EPB55_RS08550 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EPB55_RS08555 PF00588 SpoU rRNA Methylase family EPB55_RS08560 PF04186 FxsA cytoplasmic membrane protein EPB55_RS08565 PF00206 Lyase EPB55_RS08565 PF10415 Fumarase C C-terminus EPB55_RS08570 PF03605 Anaerobic c4-dicarboxylate membrane transporter EPB55_RS08575 PF11412 Disulphide bond corrector protein DsbC EPB55_RS08575 PF02683 Cytochrome C biogenesis protein transmembrane region EPB55_RS08580 PF00196 Bacterial regulatory proteins, luxR family EPB55_RS08580 PF00072 Response regulator receiver domain EPB55_RS08585 PF01914 MarC family integral membrane protein EPB55_RS08595 PF00474 Sodium:solute symporter family EPB55_RS08610 PF00072 Response regulator receiver domain EPB55_RS08610 PF01627 Hpt domain EPB55_RS08610 PF00672 HAMP domain EPB55_RS08610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS08610 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS08615 PF12832 MFS_1 like family EPB55_RS08630 PF00501 AMP-binding enzyme EPB55_RS08630 PF16177 Acetyl-coenzyme A synthetase N-terminus EPB55_RS08630 PF13193 AMP-binding enzyme C-terminal domain EPB55_RS08635 PF01220 Dehydroquinase class II EPB55_RS08640 PF00364 Biotin-requiring enzyme EPB55_RS08645 PF00289 Biotin carboxylase, N-terminal domain EPB55_RS08645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EPB55_RS08645 PF02785 Biotin carboxylase C-terminal domain EPB55_RS08655 PF01207 Dihydrouridine synthase (Dus) EPB55_RS08660 PF02954 Bacterial regulatory protein, Fis family EPB55_RS08665 PF00672 HAMP domain EPB55_RS08665 PF17200 Single Cache domain 2 EPB55_RS08665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS08670 PF13411 MerR HTH family regulatory protein EPB55_RS08680 PF01808 AICARFT/IMPCHase bienzyme EPB55_RS08680 PF02142 MGS-like domain EPB55_RS08685 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EPB55_RS08685 PF02844 Phosphoribosylglycinamide synthetase, N domain EPB55_RS08685 PF02843 Phosphoribosylglycinamide synthetase, C domain EPB55_RS08695 PF00216 Bacterial DNA-binding protein EPB55_RS08700 PF01595 Cyclin M transmembrane N-terminal domain EPB55_RS08700 PF00571 CBS domain EPB55_RS08705 PF04222 Protein of unknown function (DUF416) EPB55_RS08710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EPB55_RS08710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EPB55_RS08715 PF03167 Uracil DNA glycosylase superfamily EPB55_RS08720 PF01208 Uroporphyrinogen decarboxylase (URO-D) EPB55_RS08735 PF09297 NADH pyrophosphatase zinc ribbon domain EPB55_RS08735 PF00293 NUDIX domain EPB55_RS08740 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ EPB55_RS08750 PF10385 RNA polymerase beta subunit external 1 domain EPB55_RS08750 PF04565 RNA polymerase Rpb2, domain 3 EPB55_RS08750 PF04561 RNA polymerase Rpb2, domain 2 EPB55_RS08750 PF04563 RNA polymerase beta subunit EPB55_RS08750 PF04560 RNA polymerase Rpb2, domain 7 EPB55_RS08750 PF00562 RNA polymerase Rpb2, domain 6 EPB55_RS08755 PF00542 Ribosomal protein L7/L12 C-terminal domain EPB55_RS08755 PF16320 Ribosomal protein L7/L12 dimerisation domain EPB55_RS08760 PF00466 Ribosomal protein L10 EPB55_RS08765 PF00687 Ribosomal protein L1p/L10e family EPB55_RS08770 PF03946 Ribosomal protein L11, N-terminal domain EPB55_RS08770 PF00298 Ribosomal protein L11, RNA binding domain EPB55_RS08775 PF02357 Transcription termination factor nusG EPB55_RS08775 PF00467 KOW motif EPB55_RS08780 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EPB55_RS08785 PF00009 Elongation factor Tu GTP binding domain EPB55_RS08785 PF03144 Elongation factor Tu domain 2 EPB55_RS08785 PF03143 Elongation factor Tu C-terminal domain EPB55_RS08810 PF00485 Phosphoribulokinase / Uridine kinase family EPB55_RS08815 PF03099 Biotin/lipoate A/B protein ligase family EPB55_RS08815 PF08279 HTH domain EPB55_RS08815 PF02237 Biotin protein ligase C terminal domain EPB55_RS08820 PF01565 FAD binding domain EPB55_RS08820 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EPB55_RS08830 PF13091 PLD-like domain EPB55_RS08910 PF01177 Asp/Glu/Hydantoin racemase EPB55_RS08920 PF07715 TonB-dependent Receptor Plug Domain EPB55_RS08920 PF00593 TonB dependent receptor EPB55_RS08925 PF05958 tRNA (Uracil-5-)-methyltransferase EPB55_RS08935 PF00440 Bacterial regulatory proteins, tetR family EPB55_RS08940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPB55_RS08940 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB55_RS08950 PF01726 LexA DNA binding domain EPB55_RS08950 PF00717 Peptidase S24-like EPB55_RS08955 PF01553 Acyltransferase EPB55_RS08960 PF01040 UbiA prenyltransferase family EPB55_RS08965 PF04345 Chorismate lyase EPB55_RS08970 PF03748 Flagellar basal body-associated protein FliL EPB55_RS08975 PF01694 Rhomboid family EPB55_RS08975 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease EPB55_RS08980 PF00581 Rhodanese-like domain EPB55_RS08985 PF00140 Sigma-70 factor, region 1.2 EPB55_RS08985 PF04542 Sigma-70 region 2 EPB55_RS08985 PF04545 Sigma-70, region 4 EPB55_RS08990 PF18075 FtsX extracellular domain EPB55_RS08995 PF00005 ABC transporter EPB55_RS09000 PF00448 SRP54-type protein, GTPase domain EPB55_RS09000 PF02881 SRP54-type protein, helical bundle domain EPB55_RS09015 PF01914 MarC family integral membrane protein EPB55_RS09060 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EPB55_RS09060 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EPB55_RS09065 PF01022 Bacterial regulatory protein, arsR family EPB55_RS09070 PF00563 EAL domain EPB55_RS09070 PF08668 HDOD domain EPB55_RS09075 PF01810 LysE type translocator EPB55_RS09080 PF12146 Serine aminopeptidase, S33 EPB55_RS09100 PF03942 DTW domain EPB55_RS09105 PF00563 EAL domain EPB55_RS09105 PF10442 FIST C domain EPB55_RS09105 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS09105 PF08495 FIST N domain EPB55_RS09110 PF13419 Haloacid dehalogenase-like hydrolase EPB55_RS09115 PF02899 Phage integrase, N-terminal SAM-like domain EPB55_RS09115 PF00589 Phage integrase family EPB55_RS09125 PF01678 Diaminopimelate epimerase EPB55_RS09130 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EPB55_RS09130 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EPB55_RS09140 PF01491 Frataxin-like domain EPB55_RS09145 PF01295 Adenylate cyclase, class-I EPB55_RS09145 PF12633 Adenylate cyclase NT domain EPB55_RS09150 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EPB55_RS09150 PF03900 Porphobilinogen deaminase, C-terminal domain EPB55_RS09155 PF02602 Uroporphyrinogen-III synthase HemD EPB55_RS09160 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase EPB55_RS09175 PF10625 Universal stress protein B (UspB) EPB55_RS09180 PF00210 Ferritin-like domain EPB55_RS09185 PF00582 Universal stress protein family EPB55_RS09190 PF00892 EamA-like transporter family EPB55_RS09200 PF04445 Putative SAM-dependent methyltransferase EPB55_RS09205 PF08448 PAS fold EPB55_RS09205 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS09205 PF00563 EAL domain EPB55_RS09210 PF01037 Lrp/AsnC ligand binding domain EPB55_RS09215 PF01432 Peptidase family M3 EPB55_RS09220 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ EPB55_RS09225 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB55_RS09225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPB55_RS09245 PF01081 KDPG and KHG aldolase EPB55_RS09250 PF02447 GntP family permease EPB55_RS09255 PF01202 Shikimate kinase EPB55_RS09260 PF00920 Dehydratase family EPB55_RS09265 PF00356 Bacterial regulatory proteins, lacI family EPB55_RS09265 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EPB55_RS09270 PF00072 Response regulator receiver domain EPB55_RS09280 PF00069 Protein kinase domain EPB55_RS09280 PF03793 PASTA domain EPB55_RS09315 PF12911 N-terminal TM domain of oligopeptide transport permease C EPB55_RS09315 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS09320 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS09325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPB55_RS09330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB55_RS09330 PF00005 ABC transporter EPB55_RS09360 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EPB55_RS09365 PF00580 UvrD/REP helicase N-terminal domain EPB55_RS09365 PF13361 UvrD-like helicase C-terminal domain EPB55_RS09370 PF00440 Bacterial regulatory proteins, tetR family EPB55_RS09375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EPB55_RS09380 PF00873 AcrB/AcrD/AcrF family EPB55_RS09385 PF04380 Membrane fusogenic activity EPB55_RS09390 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EPB55_RS09390 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EPB55_RS09395 PF03466 LysR substrate binding domain EPB55_RS09395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS09430 PF00132 Bacterial transferase hexapeptide (six repeats) EPB55_RS09435 PF07369 Protein of unknown function (DUF1488) EPB55_RS09440 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EPB55_RS09440 PF08501 Shikimate dehydrogenase substrate binding domain EPB55_RS09440 PF01488 Shikimate / quinate 5-dehydrogenase EPB55_RS09445 PF01218 Coproporphyrinogen III oxidase EPB55_RS09450 PF01300 Telomere recombination EPB55_RS09455 PF00731 AIR carboxylase EPB55_RS09460 PF02222 ATP-grasp domain EPB55_RS09460 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EPB55_RS09465 PF01396 Topoisomerase DNA binding C4 zinc finger EPB55_RS09470 PF04361 Protein of unknown function (DUF494) EPB55_RS09475 PF17782 DprA winged helix domain EPB55_RS09475 PF02481 DNA recombination-mediator protein A EPB55_RS09485 PF01327 Polypeptide deformylase EPB55_RS09490 PF00551 Formyl transferase EPB55_RS09490 PF02911 Formyl transferase, C-terminal domain EPB55_RS09495 PF01029 NusB family EPB55_RS09495 PF01189 16S rRNA methyltransferase RsmB/F EPB55_RS09500 PF02080 TrkA-C domain EPB55_RS09500 PF02254 TrkA-N domain EPB55_RS09505 PF02386 Cation transport protein EPB55_RS09510 PF03006 Haemolysin-III related EPB55_RS09515 PF07070 SpoOM protein EPB55_RS09520 PF06288 Protein of unknown function (DUF1040) EPB55_RS09525 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EPB55_RS09525 PF12801 4Fe-4S binding domain EPB55_RS09525 PF13746 4Fe-4S dicluster domain EPB55_RS09530 PF01636 Phosphotransferase enzyme family EPB55_RS09535 PF01323 DSBA-like thioredoxin domain EPB55_RS09540 PF01553 Acyltransferase EPB55_RS09550 PF13335 Magnesium chelatase, subunit ChlI C-terminal EPB55_RS09550 PF01078 Magnesium chelatase, subunit ChlI EPB55_RS09555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EPB55_RS09555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EPB55_RS09555 PF00205 Thiamine pyrophosphate enzyme, central domain EPB55_RS09565 PF01063 Amino-transferase class IV EPB55_RS09570 PF00920 Dehydratase family EPB55_RS09575 PF00585 C-terminal regulatory domain of Threonine dehydratase EPB55_RS09575 PF00291 Pyridoxal-phosphate dependent enzyme EPB55_RS09580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS09580 PF03466 LysR substrate binding domain EPB55_RS09585 PF07690 Major Facilitator Superfamily EPB55_RS09590 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPB55_RS09595 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS09600 PF00132 Bacterial transferase hexapeptide (six repeats) EPB55_RS09600 PF14602 Hexapeptide repeat of succinyl-transferase EPB55_RS09600 PF12804 MobA-like NTP transferase domain EPB55_RS09605 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain EPB55_RS09605 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EPB55_RS09615 PF00231 ATP synthase EPB55_RS09620 PF00306 ATP synthase alpha/beta chain, C terminal domain EPB55_RS09620 PF02874 ATP synthase alpha/beta family, beta-barrel domain EPB55_RS09620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EPB55_RS09625 PF00213 ATP synthase delta (OSCP) subunit EPB55_RS09630 PF00430 ATP synthase B/B' CF(0) EPB55_RS09635 PF00137 ATP synthase subunit C EPB55_RS09640 PF00119 ATP synthase A chain EPB55_RS09645 PF03899 ATP synthase I chain EPB55_RS09650 PF17762 HTH domain found in ParB protein EPB55_RS09650 PF02195 ParB-like nuclease domain EPB55_RS09655 PF13614 AAA domain EPB55_RS09660 PF02527 rRNA small subunit methyltransferase G EPB55_RS09665 PF01134 Glucose inhibited division protein A EPB55_RS09665 PF13932 GidA associated domain EPB55_RS09670 PF00258 Flavodoxin EPB55_RS09675 PF12631 MnmE helical domain EPB55_RS09675 PF10396 GTP-binding protein TrmE N-terminus EPB55_RS09675 PF01926 50S ribosome-binding GTPase EPB55_RS09680 PF14849 YidC periplasmic domain EPB55_RS09680 PF02096 60Kd inner membrane protein EPB55_RS09685 PF01809 Putative membrane protein insertion efficiency factor EPB55_RS09690 PF00825 Ribonuclease P EPB55_RS09695 PF00468 Ribosomal protein L34 EPB55_RS09700 PF00005 ABC transporter EPB55_RS09705 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS09710 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPB55_RS09715 PF11638 DnaA N-terminal domain EPB55_RS09715 PF08299 Bacterial dnaA protein helix-turn-helix EPB55_RS09715 PF00308 Bacterial dnaA protein EPB55_RS09720 PF00712 DNA polymerase III beta subunit, N-terminal domain EPB55_RS09720 PF02767 DNA polymerase III beta subunit, central domain EPB55_RS09720 PF02768 DNA polymerase III beta subunit, C-terminal domain EPB55_RS09725 PF02463 RecF/RecN/SMC N terminal domain EPB55_RS09730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS09730 PF00204 DNA gyrase B EPB55_RS09730 PF01751 Toprim domain EPB55_RS09730 PF18053 DNA gyrase B subunit insert domain EPB55_RS09730 PF00986 DNA gyrase B subunit, carboxyl terminus EPB55_RS09735 PF00011 Hsp20/alpha crystallin family EPB55_RS09740 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS09740 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS09740 PF00563 EAL domain EPB55_RS09745 PF00155 Aminotransferase class I and II EPB55_RS09755 PF02092 Glycyl-tRNA synthetase beta subunit EPB55_RS09755 PF05746 DALR anticodon binding domain EPB55_RS09760 PF02091 Glycyl-tRNA synthetase alpha subunit EPB55_RS09765 PF01169 Uncharacterized protein family UPF0016 EPB55_RS09775 PF01206 Sulfurtransferase TusA EPB55_RS09785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS09785 PF03466 LysR substrate binding domain EPB55_RS09790 PF00107 Zinc-binding dehydrogenase EPB55_RS09790 PF08240 Alcohol dehydrogenase GroES-like domain EPB55_RS09795 PF00108 Thiolase, N-terminal domain EPB55_RS09795 PF02803 Thiolase, C-terminal domain EPB55_RS09800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EPB55_RS09800 PF00378 Enoyl-CoA hydratase/isomerase EPB55_RS09800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EPB55_RS09805 PF09186 Domain of unknown function (DUF1949) EPB55_RS09805 PF01205 Uncharacterized protein family UPF0029 EPB55_RS09810 PF02386 Cation transport protein EPB55_RS09815 PF12724 Flavodoxin domain EPB55_RS09855 PF07731 Multicopper oxidase EPB55_RS09855 PF07732 Multicopper oxidase EPB55_RS09855 PF00394 Multicopper oxidase EPB55_RS09860 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EPB55_RS09865 PF13667 ThiC-associated domain EPB55_RS09865 PF01964 Radical SAM ThiC family EPB55_RS09870 PF02581 Thiamine monophosphate synthase EPB55_RS09875 PF00899 ThiF family EPB55_RS09885 PF05690 Thiazole biosynthesis protein ThiG EPB55_RS09890 PF06968 Biotin and Thiamin Synthesis associated domain EPB55_RS09890 PF04055 Radical SAM superfamily EPB55_RS09895 PF00557 Metallopeptidase family M24 EPB55_RS09895 PF01321 Creatinase/Prolidase N-terminal domain EPB55_RS09895 PF00557 Metallopeptidase family M24 EPB55_RS09895 PF01321 Creatinase/Prolidase N-terminal domain EPB55_RS09900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS09900 PF03466 LysR substrate binding domain EPB55_RS09925 PF05114 Protein of unknown function (DUF692) EPB55_RS09935 PF13361 UvrD-like helicase C-terminal domain EPB55_RS09935 PF00580 UvrD/REP helicase N-terminal domain EPB55_RS09945 PF01810 LysE type translocator EPB55_RS09955 PF00892 EamA-like transporter family EPB55_RS09960 PF00570 HRDC domain EPB55_RS09960 PF16124 RecQ zinc-binding EPB55_RS09960 PF00270 DEAD/DEAH box helicase EPB55_RS09960 PF09382 RQC domain EPB55_RS09960 PF00271 Helicase conserved C-terminal domain EPB55_RS09970 PF02592 Putative vitamin uptake transporter EPB55_RS09975 PF02541 Ppx/GppA phosphatase family EPB55_RS09980 PF00271 Helicase conserved C-terminal domain EPB55_RS09980 PF00270 DEAD/DEAH box helicase EPB55_RS09985 PF00085 Thioredoxin EPB55_RS09990 PF07498 Rho termination factor, N-terminal domain EPB55_RS09990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EPB55_RS09990 PF07497 Rho termination factor, RNA-binding domain EPB55_RS10000 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EPB55_RS10005 PF00175 Oxidoreductase NAD-binding domain EPB55_RS10005 PF00111 2Fe-2S iron-sulfur cluster binding domain EPB55_RS10005 PF00970 Oxidoreductase FAD-binding domain EPB55_RS10010 PF00175 Oxidoreductase NAD-binding domain EPB55_RS10085 PF13358 DDE superfamily endonuclease EPB55_RS10100 PF02646 RmuC family EPB55_RS10105 PF01209 ubiE/COQ5 methyltransferase family EPB55_RS10110 PF02036 SCP-2 sterol transfer family EPB55_RS10115 PF03109 ABC1 family EPB55_RS10120 PF02416 mttA/Hcf106 family EPB55_RS10125 PF02416 mttA/Hcf106 family EPB55_RS10130 PF00902 Sec-independent protein translocase protein (TatC) EPB55_RS10135 PF01026 TatD related DNase EPB55_RS10140 PF00490 Delta-aminolevulinic acid dehydratase EPB55_RS10145 PF01367 5'-3' exonuclease, C-terminal SAM fold EPB55_RS10145 PF00476 DNA polymerase family A EPB55_RS10145 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EPB55_RS10145 PF01612 3'-5' exonuclease EPB55_RS10150 PF01926 50S ribosome-binding GTPase EPB55_RS10155 PF00034 Cytochrome c EPB55_RS10165 PF04220 Der GTPase activator (YihI) EPB55_RS10170 PF10675 Protein of unknown function (DUF2489) EPB55_RS10175 PF04055 Radical SAM superfamily EPB55_RS10175 PF06969 HemN C-terminal domain EPB55_RS10180 PF13188 PAS domain EPB55_RS10180 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS10180 PF00563 EAL domain EPB55_RS10180 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS10185 PF00072 Response regulator receiver domain EPB55_RS10185 PF02954 Bacterial regulatory protein, Fis family EPB55_RS10185 PF00158 Sigma-54 interaction domain EPB55_RS10190 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS10190 PF00989 PAS fold EPB55_RS10190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS10205 PF00009 Elongation factor Tu GTP binding domain EPB55_RS10205 PF00679 Elongation factor G C-terminus EPB55_RS10205 PF03144 Elongation factor Tu domain 2 EPB55_RS10220 PF03631 Virulence factor BrkB EPB55_RS10225 PF02580 D-Tyr-tRNA(Tyr) deacylase EPB55_RS10230 PF09500 Putative thioesterase (yiiD_Cterm) EPB55_RS10230 PF00583 Acetyltransferase (GNAT) family EPB55_RS10240 PF01293 Phosphoenolpyruvate carboxykinase EPB55_RS10245 PF01430 Hsp33 protein EPB55_RS10250 PF01479 S4 domain EPB55_RS10255 PF11356 Type II secretion system protein C EPB55_RS10260 PF00263 Bacterial type II and III secretion system protein EPB55_RS10260 PF03958 Bacterial type II/III secretion system short domain EPB55_RS10265 PF00437 Type II/IV secretion system protein EPB55_RS10270 PF00482 Type II secretion system (T2SS), protein F EPB55_RS10275 PF08334 Type II secretion system (T2SS), protein G EPB55_RS10275 PF07963 Prokaryotic N-terminal methylation motif EPB55_RS10280 PF12019 Type II transport protein GspH EPB55_RS10285 PF02501 Type II secretion system (T2SS), protein I EPB55_RS10285 PF07963 Prokaryotic N-terminal methylation motif EPB55_RS10290 PF11612 Type II secretion system (T2SS), protein J EPB55_RS10290 PF07963 Prokaryotic N-terminal methylation motif EPB55_RS10295 PF03934 Type II secretion system (T2SS), protein K EPB55_RS10300 PF12693 GspL periplasmic domain EPB55_RS10300 PF05134 Type II secretion system (T2SS), protein L EPB55_RS10305 PF04612 Type II secretion system (T2SS), protein M EPB55_RS10310 PF01203 Type II secretion system (T2SS), protein N EPB55_RS10315 PF00459 Inositol monophosphatase family EPB55_RS10320 PF00293 NUDIX domain EPB55_RS10325 PF01521 Iron-sulphur cluster biosynthesis EPB55_RS10325 PF01106 NifU-like domain EPB55_RS10330 PF00156 Phosphoribosyl transferase domain EPB55_RS10335 PF00561 alpha/beta hydrolase fold EPB55_RS10345 PF16921 Tex protein YqgF-like domain EPB55_RS10345 PF17674 HHH domain EPB55_RS10345 PF00575 S1 RNA binding domain EPB55_RS10345 PF09371 Tex-like protein N-terminal domain EPB55_RS10350 PF01272 Transcription elongation factor, GreA/GreB, C-term EPB55_RS10350 PF03449 Transcription elongation factor, N-terminal EPB55_RS10355 PF00486 Transcriptional regulatory protein, C terminal EPB55_RS10355 PF00072 Response regulator receiver domain EPB55_RS10360 PF00672 HAMP domain EPB55_RS10360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS10360 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS10365 PF00860 Permease family EPB55_RS10370 PF00270 DEAD/DEAH box helicase EPB55_RS10370 PF17191 RecG wedge domain EPB55_RS10370 PF00271 Helicase conserved C-terminal domain EPB55_RS10375 PF00588 SpoU rRNA Methylase family EPB55_RS10375 PF12105 SpoU, rRNA methylase, C-terminal EPB55_RS10380 PF13291 ACT domain EPB55_RS10380 PF04607 Region found in RelA / SpoT proteins EPB55_RS10380 PF02824 TGS domain EPB55_RS10385 PF01192 RNA polymerase Rpb6 EPB55_RS10390 PF00625 Guanylate kinase EPB55_RS10405 PF02472 Biopolymer transport protein ExbD/TolR EPB55_RS10410 PF01618 MotA/TolQ/ExbB proton channel family EPB55_RS10415 PF01618 MotA/TolQ/ExbB proton channel family EPB55_RS10425 PF00593 TonB dependent receptor EPB55_RS10425 PF07715 TonB-dependent Receptor Plug Domain EPB55_RS10430 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS10435 PF12911 N-terminal TM domain of oligopeptide transport permease C EPB55_RS10435 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS10440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPB55_RS10445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB55_RS10445 PF00005 ABC transporter EPB55_RS10450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB55_RS10450 PF00005 ABC transporter EPB55_RS10465 PF00892 EamA-like transporter family EPB55_RS10470 PF08340 Domain of unknown function (DUF1732) EPB55_RS10470 PF03755 YicC-like family, N-terminal region EPB55_RS10475 PF01138 3' exoribonuclease family, domain 1 EPB55_RS10475 PF03725 3' exoribonuclease family, domain 2 EPB55_RS10480 PF00156 Phosphoribosyl transferase domain EPB55_RS10485 PF03279 Bacterial lipid A biosynthesis acyltransferase EPB55_RS10490 PF00440 Bacterial regulatory proteins, tetR family EPB55_RS10495 PF04127 DNA / pantothenate metabolism flavoprotein EPB55_RS10495 PF02441 Flavoprotein EPB55_RS10500 PF00672 HAMP domain EPB55_RS10500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS10500 PF02743 Cache domain EPB55_RS10505 PF04002 RadC-like JAB domain EPB55_RS10510 PF00830 Ribosomal L28 family EPB55_RS10515 PF00471 Ribosomal protein L33 EPB55_RS10525 PF06827 Zinc finger found in FPG and IleRS EPB55_RS10525 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EPB55_RS10525 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EPB55_RS10535 PF01467 Cytidylyltransferase-like EPB55_RS10540 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EPB55_RS10545 PF00535 Glycosyl transferase family 2 EPB55_RS10550 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EPB55_RS10555 PF01219 Prokaryotic diacylglycerol kinase EPB55_RS10565 PF00884 Sulfatase EPB55_RS10565 PF11893 Domain of unknown function (DUF3413) EPB55_RS10580 PF02719 Polysaccharide biosynthesis protein EPB55_RS10585 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EPB55_RS10595 PF00117 Glutamine amidotransferase class-I EPB55_RS10600 PF00977 Histidine biosynthesis protein EPB55_RS10605 PF02348 Cytidylyltransferase EPB55_RS10615 PF03102 NeuB family EPB55_RS10615 PF08666 SAF domain EPB55_RS10625 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EPB55_RS10630 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EPB55_RS10635 PF03279 Bacterial lipid A biosynthesis acyltransferase EPB55_RS10640 PF01370 NAD dependent epimerase/dehydratase family EPB55_RS10645 PF06082 Exopolysaccharide biosynthesis protein YbjH EPB55_RS10655 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF EPB55_RS10665 PF02563 Polysaccharide biosynthesis/export protein EPB55_RS10665 PF10531 SLBB domain EPB55_RS10665 PF18412 Outer-membrane lipoprotein Wza C-terminal domain EPB55_RS10675 PF01451 Low molecular weight phosphotyrosine protein phosphatase EPB55_RS10680 PF13807 G-rich domain on putative tyrosine kinase EPB55_RS10680 PF13614 AAA domain EPB55_RS10680 PF02706 Chain length determinant protein EPB55_RS10685 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EPB55_RS10685 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EPB55_RS10685 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EPB55_RS10690 PF01370 NAD dependent epimerase/dehydratase family EPB55_RS10705 PF13439 Glycosyltransferase Family 4 EPB55_RS10705 PF00534 Glycosyl transferases group 1 EPB55_RS10710 PF13537 Glutamine amidotransferase domain EPB55_RS10710 PF00733 Asparagine synthase EPB55_RS10715 PF13477 Glycosyl transferase 4-like EPB55_RS10715 PF00534 Glycosyl transferases group 1 EPB55_RS10720 PF01370 NAD dependent epimerase/dehydratase family EPB55_RS10725 PF02397 Bacterial sugar transferase EPB55_RS10730 PF02719 Polysaccharide biosynthesis protein EPB55_RS10735 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EPB55_RS10735 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EPB55_RS10745 PF00753 Metallo-beta-lactamase superfamily EPB55_RS10745 PF10996 Beta-Casp domain EPB55_RS10745 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EPB55_RS10750 PF00338 Ribosomal protein S10p/S20e EPB55_RS10755 PF00297 Ribosomal protein L3 EPB55_RS10760 PF00573 Ribosomal protein L4/L1 family EPB55_RS10765 PF00276 Ribosomal protein L23 EPB55_RS10770 PF00181 Ribosomal Proteins L2, RNA binding domain EPB55_RS10770 PF03947 Ribosomal Proteins L2, C-terminal domain EPB55_RS10775 PF00203 Ribosomal protein S19 EPB55_RS10780 PF00237 Ribosomal protein L22p/L17e EPB55_RS10785 PF07650 KH domain EPB55_RS10785 PF00189 Ribosomal protein S3, C-terminal domain EPB55_RS10790 PF00252 Ribosomal protein L16p/L10e EPB55_RS10795 PF00831 Ribosomal L29 protein EPB55_RS10800 PF00366 Ribosomal protein S17 EPB55_RS10805 PF00238 Ribosomal protein L14p/L23e EPB55_RS10810 PF00467 KOW motif EPB55_RS10810 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EPB55_RS10815 PF00281 Ribosomal protein L5 EPB55_RS10815 PF00673 ribosomal L5P family C-terminus EPB55_RS10820 PF00253 Ribosomal protein S14p/S29e EPB55_RS10825 PF00410 Ribosomal protein S8 EPB55_RS10830 PF00347 Ribosomal protein L6 EPB55_RS10835 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EPB55_RS10840 PF03719 Ribosomal protein S5, C-terminal domain EPB55_RS10840 PF00333 Ribosomal protein S5, N-terminal domain EPB55_RS10845 PF00327 Ribosomal protein L30p/L7e EPB55_RS10850 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EPB55_RS10855 PF00344 SecY translocase EPB55_RS10860 PF00444 Ribosomal protein L36 EPB55_RS10865 PF00416 Ribosomal protein S13/S18 EPB55_RS10870 PF00411 Ribosomal protein S11 EPB55_RS10875 PF01479 S4 domain EPB55_RS10875 PF00163 Ribosomal protein S4/S9 N-terminal domain EPB55_RS10880 PF01000 RNA polymerase Rpb3/RpoA insert domain EPB55_RS10880 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EPB55_RS10880 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EPB55_RS10885 PF01196 Ribosomal protein L17 EPB55_RS10895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EPB55_RS10895 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EPB55_RS10900 PF04225 Opacity-associated protein A LysM-like domain EPB55_RS10900 PF08525 Opacity-associated protein A N-terminal motif EPB55_RS10910 PF13673 Acetyltransferase (GNAT) domain EPB55_RS10920 PF00149 Calcineurin-like phosphoesterase EPB55_RS10920 PF02872 5'-nucleotidase, C-terminal domain EPB55_RS10925 PF10414 Sirohaem synthase dimerisation region EPB55_RS10925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EPB55_RS10925 PF14824 Sirohaem biosynthesis protein central EPB55_RS10930 PF01507 Phosphoadenosine phosphosulfate reductase family EPB55_RS10935 PF00009 Elongation factor Tu GTP binding domain EPB55_RS10940 PF02080 TrkA-C domain EPB55_RS10940 PF03600 Citrate transporter EPB55_RS10965 PF12704 MacB-like periplasmic core domain EPB55_RS10965 PF02687 FtsX-like permease family EPB55_RS10965 PF00005 ABC transporter EPB55_RS10980 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) EPB55_RS10990 PF01625 Peptide methionine sulfoxide reductase EPB55_RS10995 PF01103 Surface antigen EPB55_RS10995 PF07244 Surface antigen variable number repeat EPB55_RS10995 PF17243 POTRA domain TamA domain 1 EPB55_RS11000 PF04357 TamB, inner membrane protein subunit of TAM complex EPB55_RS11005 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like EPB55_RS11015 PF00719 Inorganic pyrophosphatase EPB55_RS11020 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EPB55_RS11025 PF02875 Mur ligase family, glutamate ligase domain EPB55_RS11025 PF01225 Mur ligase family, catalytic domain EPB55_RS11025 PF08245 Mur ligase middle domain EPB55_RS11030 PF02441 Flavoprotein EPB55_RS11045 PF00005 ABC transporter EPB55_RS11050 PF04751 Protein of unknown function (DUF615) EPB55_RS11055 PF01523 Putative modulator of DNA gyrase EPB55_RS11060 PF01769 Divalent cation transporter EPB55_RS11060 PF00571 CBS domain EPB55_RS11060 PF03448 MgtE intracellular N domain EPB55_RS11065 PF00381 PTS HPr component phosphorylation site EPB55_RS11070 PF03668 P-loop ATPase protein family EPB55_RS11075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EPB55_RS11080 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EPB55_RS11085 PF00309 Sigma-54 factor, Activator interacting domain (AID) EPB55_RS11085 PF04963 Sigma-54 factor, core binding domain EPB55_RS11085 PF04552 Sigma-54, DNA binding domain EPB55_RS11090 PF00005 ABC transporter EPB55_RS11090 PF12399 Branched-chain amino acid ATP-binding cassette transporter EPB55_RS11095 PF03968 OstA-like protein EPB55_RS11110 PF00571 CBS domain EPB55_RS11110 PF01380 SIS domain EPB55_RS11115 PF01699 Sodium/calcium exchanger protein EPB55_RS11120 PF00005 ABC transporter EPB55_RS11125 PF02405 Permease MlaE EPB55_RS11130 PF02470 MlaD protein EPB55_RS11135 PF05494 MlaC protein EPB55_RS11145 PF01722 BolA-like protein EPB55_RS11150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EPB55_RS11155 PF01553 Acyltransferase EPB55_RS11160 PF00582 Universal stress protein family EPB55_RS11170 PF16868 NMT1-like family EPB55_RS11175 PF01316 Arginine repressor, DNA binding domain EPB55_RS11175 PF02863 Arginine repressor, C-terminal domain EPB55_RS11180 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EPB55_RS11180 PF00056 lactate/malate dehydrogenase, NAD binding domain EPB55_RS11185 PF00348 Polyprenyl synthetase EPB55_RS11190 PF00829 Ribosomal prokaryotic L21 protein EPB55_RS11195 PF01016 Ribosomal L27 protein EPB55_RS11200 PF01926 50S ribosome-binding GTPase EPB55_RS11200 PF01018 GTP1/OBG EPB55_RS11205 PF06738 Putative threonine/serine exporter EPB55_RS11210 PF12821 Threonine/Serine exporter, ThrE EPB55_RS11215 PF00186 Dihydrofolate reductase EPB55_RS11220 PF00149 Calcineurin-like phosphoesterase EPB55_RS11225 PF04379 ApaG domain EPB55_RS11230 PF00398 Ribosomal RNA adenine dimethylase EPB55_RS11235 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EPB55_RS11240 PF09312 SurA N-terminal domain EPB55_RS11240 PF00639 PPIC-type PPIASE domain EPB55_RS11245 PF03968 OstA-like protein EPB55_RS11245 PF04453 LPS transport system D EPB55_RS11250 PF00226 DnaJ domain EPB55_RS11250 PF05099 Tellurite resistance protein TerB EPB55_RS11260 PF00694 Aconitase C-terminal domain EPB55_RS11265 PF00330 Aconitase family (aconitate hydratase) EPB55_RS11270 PF00180 Isocitrate/isopropylmalate dehydrogenase EPB55_RS11275 PF00682 HMGL-like EPB55_RS11275 PF08502 LeuA allosteric (dimerisation) domain EPB55_RS11285 PF01569 PAP2 superfamily EPB55_RS11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS11295 PF03466 LysR substrate binding domain EPB55_RS11300 PF00501 AMP-binding enzyme EPB55_RS11305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EPB55_RS11305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EPB55_RS11305 PF00205 Thiamine pyrophosphate enzyme, central domain EPB55_RS11310 PF10369 Small subunit of acetolactate synthase EPB55_RS11315 PF07694 5TMR of 5TMR-LYT EPB55_RS11315 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS11325 PF02887 Pyruvate kinase, alpha/beta domain EPB55_RS11325 PF00224 Pyruvate kinase, barrel domain EPB55_RS11330 PF00455 DeoR C terminal sensor domain EPB55_RS11330 PF08220 DeoR-like helix-turn-helix domain EPB55_RS11335 PF01380 SIS domain EPB55_RS11340 PF05068 Mannitol repressor EPB55_RS11345 PF08125 Mannitol dehydrogenase C-terminal domain EPB55_RS11345 PF01232 Mannitol dehydrogenase Rossmann domain EPB55_RS11350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EPB55_RS11350 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPB55_RS11350 PF02378 Phosphotransferase system, EIIC EPB55_RS11355 PF03480 Bacterial extracellular solute-binding protein, family 7 EPB55_RS11375 PF03979 Sigma-70 factor, region 1.1 EPB55_RS11375 PF00140 Sigma-70 factor, region 1.2 EPB55_RS11375 PF04542 Sigma-70 region 2 EPB55_RS11375 PF04539 Sigma-70 region 3 EPB55_RS11375 PF04546 Sigma-70, non-essential region EPB55_RS11375 PF04545 Sigma-70, region 4 EPB55_RS11380 PF01807 CHC2 zinc finger EPB55_RS11380 PF08275 DNA primase catalytic core, N-terminal domain EPB55_RS11380 PF08278 DNA primase DnaG DnaB-binding EPB55_RS11380 PF10410 DnaB-helicase binding domain of primase EPB55_RS11385 PF09424 Yqey-like protein EPB55_RS11390 PF01165 Ribosomal protein S21 EPB55_RS11395 PF00814 Glycoprotease family EPB55_RS11400 PF12697 Alpha/beta hydrolase family EPB55_RS11405 PF02660 Glycerol-3-phosphate acyltransferase EPB55_RS11410 PF02152 Dihydroneopterin aldolase EPB55_RS11415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EPB55_RS11425 PF12627 Probable RNA and SrmB- binding site of polymerase A EPB55_RS11425 PF01966 HD domain EPB55_RS11425 PF01743 Poly A polymerase head domain EPB55_RS11430 PF01471 Putative peptidoglycan binding domain EPB55_RS11430 PF13401 AAA domain EPB55_RS11435 PF08239 Bacterial SH3 domain EPB55_RS11440 PF01384 Phosphate transporter family EPB55_RS11445 PF01865 Protein of unknown function DUF47 EPB55_RS11450 PF01928 CYTH domain EPB55_RS11455 PF07885 Ion channel EPB55_RS11460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS11460 PF12729 Four helix bundle sensory module for signal transduction EPB55_RS11460 PF00672 HAMP domain EPB55_RS11465 PF08335 GlnD PII-uridylyltransferase EPB55_RS11465 PF03710 Glutamate-ammonia ligase adenylyltransferase EPB55_RS11470 PF00294 pfkB family carbohydrate kinase EPB55_RS11470 PF01467 Cytidylyltransferase-like EPB55_RS11475 PF02321 Outer membrane efflux protein EPB55_RS11480 PF00293 NUDIX domain EPB55_RS11485 PF06853 Protein of unknown function (DUF1249) EPB55_RS11490 PF00149 Calcineurin-like phosphoesterase EPB55_RS11495 PF05728 Uncharacterised protein family (UPF0227) EPB55_RS11500 PF01751 Toprim domain EPB55_RS11500 PF00204 DNA gyrase B EPB55_RS11500 PF00986 DNA gyrase B subunit, carboxyl terminus EPB55_RS11500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS11505 PF00521 DNA gyrase/topoisomerase IV, subunit A EPB55_RS11505 PF03989 DNA gyrase C-terminal domain, beta-propeller EPB55_RS11510 PF13180 PDZ domain EPB55_RS11515 PF00595 PDZ domain EPB55_RS11520 PF06295 Protein of unknown function (DUF1043) EPB55_RS11525 PF03969 AFG1-like ATPase EPB55_RS11535 PF00572 Ribosomal protein L13 EPB55_RS11540 PF00380 Ribosomal protein S9/S16 EPB55_RS11545 PF00355 Rieske [2Fe-2S] domain EPB55_RS11545 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EPB55_RS11550 PF00032 Cytochrome b(C-terminal)/b6/petD EPB55_RS11550 PF00033 Cytochrome b/b6/petB EPB55_RS11555 PF02167 Cytochrome C1 family EPB55_RS11560 PF02798 Glutathione S-transferase, N-terminal domain EPB55_RS11560 PF00043 Glutathione S-transferase, C-terminal domain EPB55_RS11565 PF04386 Stringent starvation protein B EPB55_RS11570 PF04972 BON domain EPB55_RS11575 PF13580 SIS domain EPB55_RS11580 PF02021 Uncharacterised protein family UPF0102 EPB55_RS11585 PF04348 LppC putative lipoprotein EPB55_RS11590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EPB55_RS11600 PF01795 MraW methylase family EPB55_RS11605 PF04999 Cell division protein FtsL EPB55_RS11610 PF03717 Penicillin-binding Protein dimerisation domain EPB55_RS11610 PF00905 Penicillin binding protein transpeptidase domain EPB55_RS11615 PF08245 Mur ligase middle domain EPB55_RS11615 PF02875 Mur ligase family, glutamate ligase domain EPB55_RS11615 PF01225 Mur ligase family, catalytic domain EPB55_RS11620 PF02875 Mur ligase family, glutamate ligase domain EPB55_RS11620 PF01225 Mur ligase family, catalytic domain EPB55_RS11620 PF08245 Mur ligase middle domain EPB55_RS11625 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EPB55_RS11625 PF00953 Glycosyl transferase family 4 EPB55_RS11630 PF08245 Mur ligase middle domain EPB55_RS11630 PF02875 Mur ligase family, glutamate ligase domain EPB55_RS11635 PF01098 Cell cycle protein EPB55_RS11640 PF04101 Glycosyltransferase family 28 C-terminal domain EPB55_RS11640 PF03033 Glycosyltransferase family 28 N-terminal domain EPB55_RS11645 PF08245 Mur ligase middle domain EPB55_RS11645 PF02875 Mur ligase family, glutamate ligase domain EPB55_RS11645 PF01225 Mur ligase family, catalytic domain EPB55_RS11650 PF08478 POTRA domain, FtsQ-type EPB55_RS11650 PF03799 Cell division protein FtsQ EPB55_RS11655 PF02491 SHS2 domain inserted in FTSA EPB55_RS11660 PF12327 FtsZ family, C-terminal domain EPB55_RS11660 PF00091 Tubulin/FtsZ family, GTPase domain EPB55_RS11665 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EPB55_RS11675 PF02810 SEC-C motif EPB55_RS11675 PF07517 SecA DEAD-like domain EPB55_RS11675 PF01043 SecA preprotein cross-linking domain EPB55_RS11675 PF07516 SecA Wing and Scaffold domain EPB55_RS11680 PF00293 NUDIX domain EPB55_RS11685 PF05173 Dihydrodipicolinate reductase, C-terminus EPB55_RS11685 PF01113 Dihydrodipicolinate reductase, N-terminus EPB55_RS11690 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EPB55_RS11690 PF00117 Glutamine amidotransferase class-I EPB55_RS11695 PF02142 MGS-like domain EPB55_RS11695 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EPB55_RS11695 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EPB55_RS11705 PF01925 Sulfite exporter TauE/SafE EPB55_RS11710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS11710 PF03466 LysR substrate binding domain EPB55_RS11715 PF03458 UPF0126 domain EPB55_RS11720 PF01497 Periplasmic binding protein EPB55_RS11725 PF03186 CobD/Cbib protein EPB55_RS11725 PF17113 Regulatory signalling modulator protein AmpE EPB55_RS11730 PF01048 Phosphorylase superfamily EPB55_RS11740 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EPB55_RS11740 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB55_RS11745 PF04898 Glutamate synthase central domain EPB55_RS11745 PF01645 Conserved region in glutamate synthase EPB55_RS11745 PF01493 GXGXG motif EPB55_RS11745 PF00310 Glutamine amidotransferases class-II EPB55_RS11750 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB55_RS11750 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EPB55_RS11755 PF01493 GXGXG motif EPB55_RS11755 PF00310 Glutamine amidotransferases class-II EPB55_RS11755 PF04898 Glutamate synthase central domain EPB55_RS11755 PF01645 Conserved region in glutamate synthase EPB55_RS11760 PF16199 Radical_SAM C-terminal domain EPB55_RS11760 PF04055 Radical SAM superfamily EPB55_RS11765 PF00563 EAL domain EPB55_RS11765 PF01590 GAF domain EPB55_RS11765 PF00360 Phytochrome region EPB55_RS11765 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS11770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS11770 PF18415 Histidine kinase receptor ArcB trans-membrane domain EPB55_RS11770 PF01627 Hpt domain EPB55_RS11770 PF00989 PAS fold EPB55_RS11770 PF00072 Response regulator receiver domain EPB55_RS11770 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS11780 PF00486 Transcriptional regulatory protein, C terminal EPB55_RS11780 PF00072 Response regulator receiver domain EPB55_RS11795 PF03737 Aldolase/RraA EPB55_RS11805 PF01842 ACT domain EPB55_RS11805 PF13840 ACT domain EPB55_RS11805 PF00742 Homoserine dehydrogenase EPB55_RS11805 PF00696 Amino acid kinase family EPB55_RS11805 PF03447 Homoserine dehydrogenase, NAD binding domain EPB55_RS11810 PF00288 GHMP kinases N terminal domain EPB55_RS11810 PF08544 GHMP kinases C terminal EPB55_RS11815 PF00291 Pyridoxal-phosphate dependent enzyme EPB55_RS11815 PF14821 Threonine synthase N terminus EPB55_RS11820 PF01228 Glycine radical EPB55_RS11825 PF01261 Xylose isomerase-like TIM barrel EPB55_RS11830 PF03167 Uracil DNA glycosylase superfamily EPB55_RS11845 PF01235 Sodium:alanine symporter family EPB55_RS11850 PF03883 Peroxide stress protein YaaA EPB55_RS11855 PF00271 Helicase conserved C-terminal domain EPB55_RS11855 PF00270 DEAD/DEAH box helicase EPB55_RS11860 PF05175 Methyltransferase small domain EPB55_RS11865 PF05525 Branched-chain amino acid transport protein EPB55_RS11870 PF00258 Flavodoxin EPB55_RS11875 PF02899 Phage integrase, N-terminal SAM-like domain EPB55_RS11875 PF00589 Phage integrase family EPB55_RS11880 PF10411 Disulfide bond isomerase protein N-terminus EPB55_RS11880 PF13098 Thioredoxin-like domain EPB55_RS11885 PF02272 DHHA1 domain EPB55_RS11885 PF17768 RecJ OB domain EPB55_RS11885 PF01368 DHH family EPB55_RS11895 PF00152 tRNA synthetases class II (D, K and N) EPB55_RS11895 PF01336 OB-fold nucleic acid binding domain EPB55_RS11900 PF06505 Activator of aromatic catabolism EPB55_RS11900 PF02954 Bacterial regulatory protein, Fis family EPB55_RS11900 PF00158 Sigma-54 interaction domain EPB55_RS11900 PF02830 V4R domain EPB55_RS11910 PF00248 Aldo/keto reductase family EPB55_RS11920 PF02976 DNA mismatch repair enzyme MutH EPB55_RS11925 PF00293 NUDIX domain EPB55_RS11930 PF01590 GAF domain EPB55_RS11930 PF05524 PEP-utilising enzyme, N-terminal EPB55_RS11930 PF02896 PEP-utilising enzyme, TIM barrel domain EPB55_RS11930 PF00391 PEP-utilising enzyme, mobile domain EPB55_RS11935 PF01925 Sulfite exporter TauE/SafE EPB55_RS11940 PF01790 Prolipoprotein diacylglyceryl transferase EPB55_RS11945 PF00303 Thymidylate synthase EPB55_RS11955 PF02690 Na+/Pi-cotransporter EPB55_RS11960 PF03466 LysR substrate binding domain EPB55_RS11960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS11965 PF01022 Bacterial regulatory protein, arsR family EPB55_RS11970 PF01649 Ribosomal protein S20 EPB55_RS11975 PF03023 Lipid II flippase MurJ EPB55_RS11980 PF01687 Riboflavin kinase EPB55_RS11980 PF06574 FAD synthetase EPB55_RS11985 PF08264 Anticodon-binding domain of tRNA EPB55_RS11985 PF00133 tRNA synthetases class I (I, L, M and V) EPB55_RS11985 PF06827 Zinc finger found in FPG and IleRS EPB55_RS11990 PF01252 Signal peptidase (SPase) II EPB55_RS11995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EPB55_RS12000 PF02401 LytB protein EPB55_RS12005 PF00072 Response regulator receiver domain EPB55_RS12005 PF04397 LytTr DNA-binding domain EPB55_RS12010 PF06580 Histidine kinase EPB55_RS12010 PF07694 5TMR of 5TMR-LYT EPB55_RS12015 PF02554 Carbon starvation protein CstA EPB55_RS12035 PF03702 Anhydro-N-acetylmuramic acid kinase EPB55_RS12040 PF00933 Glycosyl hydrolase family 3 N terminal domain EPB55_RS12045 PF00793 DAHP synthetase I family EPB55_RS12050 PF02153 Prephenate dehydrogenase EPB55_RS12050 PF01817 Chorismate mutase type II EPB55_RS12055 PF01551 Peptidase family M23 EPB55_RS12055 PF04225 Opacity-associated protein A LysM-like domain EPB55_RS12060 PF07238 PilZ domain EPB55_RS12065 PF12848 ABC transporter EPB55_RS12065 PF00005 ABC transporter EPB55_RS12070 PF01464 Transglycosylase SLT domain EPB55_RS12070 PF14718 Soluble lytic murein transglycosylase L domain EPB55_RS12075 PF01371 Trp repressor protein EPB55_RS12080 PF01931 Protein of unknown function DUF84 EPB55_RS12085 PF01817 Chorismate mutase type II EPB55_RS12085 PF00800 Prephenate dehydratase EPB55_RS12090 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EPB55_RS12095 PF13006 Insertion element 4 transposase N-terminal EPB55_RS12095 PF01609 Transposase DDE domain EPB55_RS12100 PF13525 Outer membrane lipoprotein EPB55_RS12110 PF02578 Multi-copper polyphenol oxidoreductase laccase EPB55_RS12115 PF07724 AAA domain (Cdc48 subfamily) EPB55_RS12115 PF17871 AAA lid domain EPB55_RS12115 PF10431 C-terminal, D2-small domain, of ClpB protein EPB55_RS12115 PF00004 ATPase family associated with various cellular activities (AAA) EPB55_RS12115 PF02861 Clp amino terminal domain, pathogenicity island component EPB55_RS12155 PF13006 Insertion element 4 transposase N-terminal EPB55_RS12155 PF01609 Transposase DDE domain EPB55_RS12160 PF00037 4Fe-4S binding domain EPB55_RS12165 PF16325 Peptidase family U32 C-terminal domain EPB55_RS12165 PF01136 Peptidase family U32 EPB55_RS12170 PF04381 Putative exonuclease, RdgC EPB55_RS12175 PF00486 Transcriptional regulatory protein, C terminal EPB55_RS12175 PF00072 Response regulator receiver domain EPB55_RS12180 PF11808 Phosphate regulon sensor protein PhoR EPB55_RS12180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS12180 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS12180 PF00989 PAS fold EPB55_RS12185 PF12849 PBP superfamily domain EPB55_RS12190 PF02541 Ppx/GppA phosphatase family EPB55_RS12195 PF13090 Polyphosphate kinase C-terminal domain 2 EPB55_RS12195 PF13089 Polyphosphate kinase N-terminal domain EPB55_RS12195 PF02503 Polyphosphate kinase middle domain EPB55_RS12195 PF17941 Polyphosphate kinase C-terminal domain 1 EPB55_RS12200 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS12205 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS12210 PF00005 ABC transporter EPB55_RS12215 PF01895 PhoU domain EPB55_RS12225 PF03466 LysR substrate binding domain EPB55_RS12225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS12230 PF03976 Polyphosphate kinase 2 (PPK2) EPB55_RS12235 PF03932 CutC family EPB55_RS12240 PF10417 C-terminal domain of 1-Cys peroxiredoxin EPB55_RS12240 PF00578 AhpC/TSA family EPB55_RS12245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS12245 PF03466 LysR substrate binding domain EPB55_RS12250 PF01274 Malate synthase EPB55_RS12255 PF00463 Isocitrate lyase family EPB55_RS12260 PF00571 CBS domain EPB55_RS12270 PF02547 Queuosine biosynthesis protein EPB55_RS12275 PF01702 Queuine tRNA-ribosyltransferase EPB55_RS12280 PF02699 Preprotein translocase subunit EPB55_RS12285 PF07549 SecD/SecF GG Motif EPB55_RS12285 PF13721 SecD export protein N-terminal TM region EPB55_RS12285 PF02355 Protein export membrane protein EPB55_RS12290 PF02355 Protein export membrane protein EPB55_RS12290 PF07549 SecD/SecF GG Motif EPB55_RS12305 PF00459 Inositol monophosphatase family EPB55_RS12310 PF00588 SpoU rRNA Methylase family EPB55_RS12315 PF02082 Transcriptional regulator EPB55_RS12320 PF00266 Aminotransferase class-V EPB55_RS12325 PF01592 NifU-like N terminal domain EPB55_RS12330 PF01521 Iron-sulphur cluster biosynthesis EPB55_RS12335 PF07743 HSCB C-terminal oligomerisation domain EPB55_RS12335 PF00226 DnaJ domain EPB55_RS12340 PF00012 Hsp70 protein EPB55_RS12345 PF00111 2Fe-2S iron-sulfur cluster binding domain EPB55_RS12350 PF04384 Iron-sulphur cluster assembly EPB55_RS12355 PF12404 Peptidase EPB55_RS12355 PF00883 Cytosol aminopeptidase family, catalytic domain EPB55_RS12360 PF00334 Nucleoside diphosphate kinase EPB55_RS12365 PF04055 Radical SAM superfamily EPB55_RS12370 PF13464 Domain of unknown function (DUF4115) EPB55_RS12375 PF04551 GcpE protein EPB55_RS12380 PF03129 Anticodon binding domain EPB55_RS12380 PF13393 Histidyl-tRNA synthetase EPB55_RS12385 PF09976 Tetratricopeptide repeat-like domain EPB55_RS12390 PF13360 PQQ-like domain EPB55_RS12395 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EPB55_RS12395 PF01926 50S ribosome-binding GTPase EPB55_RS12405 PF13185 GAF domain EPB55_RS12405 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS12415 PF13742 OB-fold nucleic acid binding domain EPB55_RS12415 PF02601 Exonuclease VII, large subunit EPB55_RS12420 PF00571 CBS domain EPB55_RS12420 PF00478 IMP dehydrogenase / GMP reductase domain EPB55_RS12425 PF00117 Glutamine amidotransferase class-I EPB55_RS12425 PF00958 GMP synthase C terminal domain EPB55_RS12425 PF02540 NAD synthase EPB55_RS12430 PF06483 Chitinase C EPB55_RS12430 PF00704 Glycosyl hydrolases family 18 EPB55_RS12435 PF01184 GPR1/FUN34/yaaH family EPB55_RS12440 PF01235 Sodium:alanine symporter family EPB55_RS12445 PF01266 FAD dependent oxidoreductase EPB55_RS12450 PF03466 LysR substrate binding domain EPB55_RS12450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS12455 PF07885 Ion channel EPB55_RS12460 PF02028 BCCT, betaine/carnitine/choline family transporter EPB55_RS12465 PF01609 Transposase DDE domain EPB55_RS12465 PF13006 Insertion element 4 transposase N-terminal EPB55_RS12475 PF01300 Telomere recombination EPB55_RS12475 PF03481 Putative GTP-binding controlling metal-binding EPB55_RS12515 PF01668 SmpB protein EPB55_RS12520 PF03364 Polyketide cyclase / dehydrase and lipid transport EPB55_RS12525 PF03658 RnfH family Ubiquitin EPB55_RS12530 PF04355 SmpA / OmlA family EPB55_RS12535 PF02463 RecF/RecN/SMC N terminal domain EPB55_RS12540 PF01513 ATP-NAD kinase EPB55_RS12545 PF01025 GrpE EPB55_RS12550 PF00375 Sodium:dicarboxylate symporter family EPB55_RS12575 PF00012 Hsp70 protein EPB55_RS12580 PF01556 DnaJ C terminal domain EPB55_RS12580 PF00684 DnaJ central domain EPB55_RS12580 PF00226 DnaJ domain EPB55_RS12585 PF07963 Prokaryotic N-terminal methylation motif EPB55_RS12585 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor EPB55_RS12590 PF00114 Pilin (bacterial filament) EPB55_RS12590 PF07963 Prokaryotic N-terminal methylation motif EPB55_RS12610 PF03806 AbgT putative transporter family EPB55_RS12615 PF00756 Putative esterase EPB55_RS12620 PF00107 Zinc-binding dehydrogenase EPB55_RS12620 PF08240 Alcohol dehydrogenase GroES-like domain EPB55_RS12625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS12625 PF03466 LysR substrate binding domain EPB55_RS12630 PF14437 MafB19-like deaminase EPB55_RS12640 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPB55_RS12640 PF01464 Transglycosylase SLT domain EPB55_RS12645 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EPB55_RS12645 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal EPB55_RS12645 PF02769 AIR synthase related protein, C-terminal domain EPB55_RS12670 PF01546 Peptidase family M20/M25/M40 EPB55_RS12670 PF07687 Peptidase dimerisation domain EPB55_RS12675 PF00860 Permease family EPB55_RS12680 PF00156 Phosphoribosyl transferase domain EPB55_RS12685 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) EPB55_RS12690 PF07417 Sigma factor-binding transcriptional regulator Crl EPB55_RS12695 PF00696 Amino acid kinase family EPB55_RS12695 PF01472 PUA domain EPB55_RS12700 PF00171 Aldehyde dehydrogenase family EPB55_RS12705 PF03477 ATP cone domain EPB55_RS12710 PF01872 RibD C-terminal domain EPB55_RS12710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EPB55_RS12715 PF00677 Lumazine binding domain EPB55_RS12720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EPB55_RS12720 PF00925 GTP cyclohydrolase II EPB55_RS12725 PF00885 6,7-dimethyl-8-ribityllumazine synthase EPB55_RS12730 PF01029 NusB family EPB55_RS12735 PF02769 AIR synthase related protein, C-terminal domain EPB55_RS12735 PF00586 AIR synthase related protein, N-terminal domain EPB55_RS12740 PF04608 Phosphatidylglycerophosphatase A EPB55_RS12745 PF02779 Transketolase, pyrimidine binding domain EPB55_RS12745 PF02780 Transketolase, C-terminal domain EPB55_RS12745 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EPB55_RS12750 PF00348 Polyprenyl synthetase EPB55_RS12755 PF02609 Exonuclease VII small subunit EPB55_RS12760 PF01618 MotA/TolQ/ExbB proton channel family EPB55_RS12765 PF13677 Membrane MotB of proton-channel complex MotA/MotB EPB55_RS12765 PF00691 OmpA family EPB55_RS12770 PF02926 THUMP domain EPB55_RS12770 PF02568 Thiamine biosynthesis protein (ThiI) EPB55_RS12775 PF03466 LysR substrate binding domain EPB55_RS12775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS12785 PF04241 Protein of unknown function (DUF423) EPB55_RS12790 PF18125 RlmM ferredoxin-like domain EPB55_RS12790 PF01728 FtsJ-like methyltransferase EPB55_RS12795 PF01223 DNA/RNA non-specific endonuclease EPB55_RS12800 PF01367 5'-3' exonuclease, C-terminal SAM fold EPB55_RS12800 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EPB55_RS12805 PF11892 Domain of unknown function (DUF3412) EPB55_RS12805 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases EPB55_RS12805 PF03641 Possible lysine decarboxylase EPB55_RS12810 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS12820 PF14489 QueF-like protein EPB55_RS12820 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term EPB55_RS12825 PF07348 Syd protein (SUKH-2) EPB55_RS12830 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) EPB55_RS12835 PF03180 NLPA lipoprotein EPB55_RS12840 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS12845 PF00005 ABC transporter EPB55_RS12845 PF09383 NIL domain EPB55_RS12855 PF00356 Bacterial regulatory proteins, lacI family EPB55_RS12860 PF00367 phosphotransferase system, EIIB EPB55_RS12860 PF02378 Phosphotransferase system, EIIC EPB55_RS12865 PF16657 Maltogenic Amylase, C-terminal domain EPB55_RS12865 PF00128 Alpha amylase, catalytic domain EPB55_RS12875 PF00464 Serine hydroxymethyltransferase EPB55_RS12885 PF04055 Radical SAM superfamily EPB55_RS12885 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EPB55_RS12890 PF03099 Biotin/lipoate A/B protein ligase family EPB55_RS12895 PF04359 Protein of unknown function (DUF493) EPB55_RS12900 PF00768 D-alanyl-D-alanine carboxypeptidase EPB55_RS12900 PF07943 Penicillin-binding protein 5, C-terminal domain EPB55_RS12905 PF03330 Lytic transglycolase EPB55_RS12905 PF05036 Sporulation related domain EPB55_RS12910 PF01098 Cell cycle protein EPB55_RS12915 PF00905 Penicillin binding protein transpeptidase domain EPB55_RS12915 PF03717 Penicillin-binding Protein dimerisation domain EPB55_RS12920 PF02590 Predicted SPOUT methyltransferase EPB55_RS12930 PF14840 Processivity clamp loader gamma complex DNA pol III C-term EPB55_RS12930 PF06144 DNA polymerase III, delta subunit EPB55_RS12935 PF04390 Lipopolysaccharide-assembly EPB55_RS12940 PF08264 Anticodon-binding domain of tRNA EPB55_RS12940 PF13603 Leucyl-tRNA synthetase, Domain 2 EPB55_RS12940 PF00133 tRNA synthetases class I (I, L, M and V) EPB55_RS12945 PF07295 Zinc-ribbon containing domain EPB55_RS12950 PF00795 Carbon-nitrogen hydrolase EPB55_RS12955 PF00571 CBS domain EPB55_RS12955 PF03471 Transporter associated domain EPB55_RS12960 PF02130 Uncharacterized protein family UPF0054 EPB55_RS12965 PF02562 PhoH-like protein EPB55_RS12970 PF04055 Radical SAM superfamily EPB55_RS12970 PF01938 TRAM domain EPB55_RS12970 PF00919 Uncharacterized protein family UPF0004 EPB55_RS12975 PF01494 FAD binding domain EPB55_RS13055 PF06071 Protein of unknown function (DUF933) EPB55_RS13055 PF01926 50S ribosome-binding GTPase EPB55_RS13060 PF01195 Peptidyl-tRNA hydrolase EPB55_RS13065 PF14572 Phosphoribosyl synthetase-associated domain EPB55_RS13065 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EPB55_RS13070 PF08544 GHMP kinases C terminal EPB55_RS13070 PF00288 GHMP kinases N terminal domain EPB55_RS13075 PF03550 Outer membrane lipoprotein LolB EPB55_RS13080 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EPB55_RS13080 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EPB55_RS13080 PF01488 Shikimate / quinate 5-dehydrogenase EPB55_RS13085 PF03462 PCRF domain EPB55_RS13085 PF00472 RF-1 domain EPB55_RS13090 PF13847 Methyltransferase domain EPB55_RS13090 PF17827 PrmC N-terminal domain EPB55_RS13095 PF04247 Invasion gene expression up-regulator, SirB EPB55_RS13100 PF13369 Transglutaminase-like superfamily EPB55_RS13105 PF00793 DAHP synthetase I family EPB55_RS13110 PF02872 5'-nucleotidase, C-terminal domain EPB55_RS13110 PF00149 Calcineurin-like phosphoesterase EPB55_RS13115 PF04073 Aminoacyl-tRNA editing domain EPB55_RS13120 PF00849 RNA pseudouridylate synthase EPB55_RS13120 PF01479 S4 domain EPB55_RS13125 PF01713 Smr domain EPB55_RS13140 PF01963 TraB family EPB55_RS13145 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain EPB55_RS13145 PF00728 Glycosyl hydrolase family 20, catalytic domain EPB55_RS13145 PF03173 Putative carbohydrate binding domain EPB55_RS13145 PF02838 Glycosyl hydrolase family 20, domain 2 EPB55_RS13155 PF00403 Heavy-metal-associated domain EPB55_RS13160 PF13609 Gram-negative porin EPB55_RS13165 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) EPB55_RS13170 PF00749 tRNA synthetases class I (E and Q), catalytic domain EPB55_RS13215 PF00072 Response regulator receiver domain EPB55_RS13215 PF01584 CheW-like domain EPB55_RS13220 PF01739 CheR methyltransferase, SAM binding domain EPB55_RS13220 PF03705 CheR methyltransferase, all-alpha domain EPB55_RS13225 PF00460 Flagella basal body rod protein EPB55_RS13230 PF00460 Flagella basal body rod protein EPB55_RS13230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EPB55_RS13235 PF03963 Flagellar hook capping protein - N-terminal region EPB55_RS13235 PF13860 FlgD Ig-like domain EPB55_RS13235 PF13861 FlgD Tudor-like domain EPB55_RS13240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EPB55_RS13240 PF00460 Flagella basal body rod protein EPB55_RS13240 PF07559 Flagellar basal body protein FlaE EPB55_RS13245 PF00460 Flagella basal body rod protein EPB55_RS13245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EPB55_RS13250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EPB55_RS13250 PF00460 Flagella basal body rod protein EPB55_RS13255 PF02107 Flagellar L-ring protein EPB55_RS13260 PF02119 Flagellar P-ring protein EPB55_RS13265 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EPB55_RS13265 PF10135 Rod binding protein EPB55_RS13270 PF07196 Flagellin hook IN motif EPB55_RS13270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EPB55_RS13275 PF00669 Bacterial flagellin N-terminal helical region EPB55_RS13280 PF00669 Bacterial flagellin N-terminal helical region EPB55_RS13280 PF07196 Flagellin hook IN motif EPB55_RS13280 PF00700 Bacterial flagellin C-terminal helical region EPB55_RS13290 PF00700 Bacterial flagellin C-terminal helical region EPB55_RS13290 PF07196 Flagellin hook IN motif EPB55_RS13290 PF00669 Bacterial flagellin N-terminal helical region EPB55_RS13295 PF00700 Bacterial flagellin C-terminal helical region EPB55_RS13295 PF00669 Bacterial flagellin N-terminal helical region EPB55_RS13295 PF07196 Flagellin hook IN motif EPB55_RS13300 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EPB55_RS13305 PF02896 PEP-utilising enzyme, TIM barrel domain EPB55_RS13305 PF00391 PEP-utilising enzyme, mobile domain EPB55_RS13305 PF05524 PEP-utilising enzyme, N-terminal EPB55_RS13310 PF00381 PTS HPr component phosphorylation site EPB55_RS13315 PF00291 Pyridoxal-phosphate dependent enzyme EPB55_RS13325 PF04354 ZipA, C-terminal FtsZ-binding domain EPB55_RS13355 PF00085 Thioredoxin EPB55_RS13365 PF00106 short chain dehydrogenase EPB55_RS13370 PF08338 Domain of unknown function (DUF1731) EPB55_RS13370 PF01370 NAD dependent epimerase/dehydratase family EPB55_RS13375 PF07556 Protein of unknown function (DUF1538) EPB55_RS13380 PF07556 Protein of unknown function (DUF1538) EPB55_RS13395 PF12850 Calcineurin-like phosphoesterase superfamily domain EPB55_RS13410 PF17323 Trans-membrane regulatory protein ToxS EPB55_RS13415 PF00486 Transcriptional regulatory protein, C terminal EPB55_RS13420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS13420 PF00183 Hsp90 protein EPB55_RS13425 PF05191 Adenylate kinase, active site lid EPB55_RS13430 PF00762 Ferrochelatase EPB55_RS13435 PF00672 HAMP domain EPB55_RS13435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS13435 PF17200 Single Cache domain 2 EPB55_RS13440 PF00854 POT family EPB55_RS13450 PF13537 Glutamine amidotransferase domain EPB55_RS13450 PF00733 Asparagine synthase EPB55_RS13455 PF00999 Sodium/hydrogen exchanger family EPB55_RS13455 PF02254 TrkA-N domain EPB55_RS13460 PF00480 ROK family EPB55_RS13460 PF01047 MarR family EPB55_RS13465 PF01979 Amidohydrolase family EPB55_RS13470 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EPB55_RS13470 PF00367 phosphotransferase system, EIIB EPB55_RS13470 PF02378 Phosphotransferase system, EIIC EPB55_RS13475 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EPB55_RS13475 PF00749 tRNA synthetases class I (E and Q), catalytic domain EPB55_RS13480 PF01475 Ferric uptake regulator family EPB55_RS13490 PF00258 Flavodoxin EPB55_RS13500 PF12697 Alpha/beta hydrolase family EPB55_RS13505 PF03925 SeqA protein C-terminal domain EPB55_RS13505 PF17206 SeqA protein N-terminal domain EPB55_RS13510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EPB55_RS13510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EPB55_RS13510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EPB55_RS13510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EPB55_RS13515 PF13309 HTH domain EPB55_RS13515 PF08348 YheO-like PAS domain EPB55_RS13520 PF01042 Endoribonuclease L-PSP EPB55_RS13525 PF00375 Sodium:dicarboxylate symporter family EPB55_RS13530 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB55_RS13530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPB55_RS13540 PF01784 NIF3 (NGG1p interacting factor 3) EPB55_RS13545 PF00285 Citrate synthase, C-terminal domain EPB55_RS13550 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EPB55_RS13555 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EPB55_RS13560 PF02910 Fumarate reductase flavoprotein C-term EPB55_RS13560 PF00890 FAD binding domain EPB55_RS13565 PF13085 2Fe-2S iron-sulfur cluster binding domain EPB55_RS13570 PF00676 Dehydrogenase E1 component EPB55_RS13570 PF16870 2-oxoglutarate dehydrogenase C-terminal EPB55_RS13570 PF16078 2-oxoglutarate dehydrogenase N-terminus EPB55_RS13570 PF02779 Transketolase, pyrimidine binding domain EPB55_RS13575 PF02817 e3 binding domain EPB55_RS13575 PF00364 Biotin-requiring enzyme EPB55_RS13575 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EPB55_RS13580 PF08442 ATP-grasp domain EPB55_RS13580 PF00549 CoA-ligase EPB55_RS13585 PF00549 CoA-ligase EPB55_RS13585 PF02629 CoA binding domain EPB55_RS13590 PF00950 ABC 3 transport family EPB55_RS13595 PF00005 ABC transporter EPB55_RS13600 PF01297 Zinc-uptake complex component A periplasmic EPB55_RS13610 PF04023 FeoA domain EPB55_RS13615 PF07670 Nucleoside recognition EPB55_RS13615 PF07664 Ferrous iron transport protein B C terminus EPB55_RS13615 PF02421 Ferrous iron transport protein B EPB55_RS13615 PF17910 FeoB cytosolic helical domain EPB55_RS13630 PF05746 DALR anticodon binding domain EPB55_RS13630 PF03485 Arginyl tRNA synthetase N terminal domain EPB55_RS13630 PF00750 tRNA synthetases class I (R) EPB55_RS13635 PF06185 YecM protein EPB55_RS13640 PF00551 Formyl transferase EPB55_RS13640 PF01842 ACT domain EPB55_RS13650 PF13307 Helicase C-terminal domain EPB55_RS13650 PF04851 Type III restriction enzyme, res subunit EPB55_RS13655 PF00814 Glycoprotease family EPB55_RS13670 PF00561 alpha/beta hydrolase fold EPB55_RS13675 PF00501 AMP-binding enzyme EPB55_RS13675 PF13193 AMP-binding enzyme C-terminal domain EPB55_RS13680 PF01612 3'-5' exonuclease EPB55_RS13680 PF00570 HRDC domain EPB55_RS13685 PF03776 Septum formation topological specificity factor MinE EPB55_RS13690 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EPB55_RS13695 PF05209 Septum formation inhibitor MinC, N-terminal domain EPB55_RS13695 PF03775 Septum formation inhibitor MinC, C-terminal domain EPB55_RS13700 PF05166 YcgL domain EPB55_RS13705 PF13406 Transglycosylase SLT domain EPB55_RS13710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS13710 PF03466 LysR substrate binding domain EPB55_RS13715 PF07662 Na+ dependent nucleoside transporter C-terminus EPB55_RS13715 PF07670 Nucleoside recognition EPB55_RS13715 PF01773 Na+ dependent nucleoside transporter N-terminus EPB55_RS13725 PF00072 Response regulator receiver domain EPB55_RS13725 PF00486 Transcriptional regulatory protein, C terminal EPB55_RS13730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS13730 PF18719 ArlS sensor domain EPB55_RS13730 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS13740 PF02801 Beta-ketoacyl synthase, C-terminal domain EPB55_RS13740 PF00109 Beta-ketoacyl synthase, N-terminal domain EPB55_RS13755 PF02801 Beta-ketoacyl synthase, C-terminal domain EPB55_RS13755 PF00109 Beta-ketoacyl synthase, N-terminal domain EPB55_RS13780 PF00221 Aromatic amino acid lyase EPB55_RS13785 PF00535 Glycosyl transferase family 2 EPB55_RS13795 PF13193 AMP-binding enzyme C-terminal domain EPB55_RS13795 PF00501 AMP-binding enzyme EPB55_RS13805 PF00550 Phosphopantetheine attachment site EPB55_RS13810 PF00550 Phosphopantetheine attachment site EPB55_RS13835 PF04820 Tryptophan halogenase EPB55_RS13845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS13845 PF02743 Cache domain EPB55_RS13845 PF00672 HAMP domain EPB55_RS13855 PF00486 Transcriptional regulatory protein, C terminal EPB55_RS13855 PF00072 Response regulator receiver domain EPB55_RS13865 PF01547 Bacterial extracellular solute-binding protein EPB55_RS13870 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS13875 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS13880 PF03459 TOBE domain EPB55_RS13880 PF17912 MalK OB fold domain EPB55_RS13880 PF00005 ABC transporter EPB55_RS13885 PF03480 Bacterial extracellular solute-binding protein, family 7 EPB55_RS13890 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EPB55_RS13895 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EPB55_RS13905 PF02954 Bacterial regulatory protein, Fis family EPB55_RS13905 PF00072 Response regulator receiver domain EPB55_RS13905 PF00158 Sigma-54 interaction domain EPB55_RS13910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS13910 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS13910 PF02743 Cache domain EPB55_RS13915 PF05697 Bacterial trigger factor protein (TF) EPB55_RS13915 PF05698 Bacterial trigger factor protein (TF) C-terminus EPB55_RS13915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EPB55_RS13920 PF00574 Clp protease EPB55_RS13925 PF07724 AAA domain (Cdc48 subfamily) EPB55_RS13925 PF10431 C-terminal, D2-small domain, of ClpB protein EPB55_RS13925 PF06689 ClpX C4-type zinc finger EPB55_RS13930 PF02190 ATP-dependent protease La (LON) substrate-binding domain EPB55_RS13930 PF05362 Lon protease (S16) C-terminal proteolytic domain EPB55_RS13930 PF00004 ATPase family associated with various cellular activities (AAA) EPB55_RS13935 PF00216 Bacterial DNA-binding protein EPB55_RS13940 PF13145 PPIC-type PPIASE domain EPB55_RS13960 PF01966 HD domain EPB55_RS13960 PF13286 Phosphohydrolase-associated domain EPB55_RS13970 PF00155 Aminotransferase class I and II EPB55_RS13975 PF00425 chorismate binding enzyme EPB55_RS13980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EPB55_RS13980 PF16582 Middle domain of thiamine pyrophosphate EPB55_RS13980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EPB55_RS13985 PF12697 Alpha/beta hydrolase family EPB55_RS13990 PF00378 Enoyl-CoA hydratase/isomerase EPB55_RS13995 PF13378 Enolase C-terminal domain-like EPB55_RS14005 PF03601 Conserved hypothetical protein 698 EPB55_RS14010 PF07690 Major Facilitator Superfamily EPB55_RS14050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EPB55_RS14050 PF00529 HlyD membrane-fusion protein of T1SS EPB55_RS14055 PF00873 AcrB/AcrD/AcrF family EPB55_RS14105 PF00291 Pyridoxal-phosphate dependent enzyme EPB55_RS14110 PF01037 Lrp/AsnC ligand binding domain EPB55_RS14110 PF13404 AsnC-type helix-turn-helix domain EPB55_RS14125 PF09619 Type III secretion system lipoprotein chaperone (YscW) EPB55_RS14130 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EPB55_RS14140 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS14140 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS14140 PF00563 EAL domain EPB55_RS14180 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) EPB55_RS14180 PF00271 Helicase conserved C-terminal domain EPB55_RS14180 PF08463 EcoEI R protein C-terminal EPB55_RS14180 PF04851 Type III restriction enzyme, res subunit EPB55_RS14190 PF12161 HsdM N-terminal domain EPB55_RS14190 PF02384 N-6 DNA Methylase EPB55_RS14195 PF01420 Type I restriction modification DNA specificity domain EPB55_RS14200 PF13175 AAA ATPase domain EPB55_RS14275 PF07969 Amidohydrolase family EPB55_RS14290 PF02743 Cache domain EPB55_RS14290 PF00672 HAMP domain EPB55_RS14290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS14295 PF01263 Aldose 1-epimerase EPB55_RS14300 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EPB55_RS14300 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EPB55_RS14305 PF01641 SelR domain EPB55_RS14315 PF07023 Protein of unknown function (DUF1315) EPB55_RS14320 PF00710 Asparaginase, N-terminal EPB55_RS14320 PF17763 Glutaminase/Asparaginase C-terminal domain EPB55_RS14325 PF01343 Peptidase family S49 EPB55_RS14330 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB55_RS14330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EPB55_RS14335 PF00881 Nitroreductase family EPB55_RS14340 PF01131 DNA topoisomerase EPB55_RS14340 PF01751 Toprim domain EPB55_RS14345 PF00850 Histone deacetylase domain EPB55_RS14350 PF09308 LuxQ, periplasmic EPB55_RS14350 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS14350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS14350 PF00072 Response regulator receiver domain EPB55_RS14355 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS14355 PF00072 Response regulator receiver domain EPB55_RS14360 PF13091 PLD-like domain EPB55_RS14365 PF04074 YhcH/YjgK/YiaL EPB55_RS14370 PF02386 Cation transport protein EPB55_RS14375 PF02080 TrkA-C domain EPB55_RS14375 PF02254 TrkA-N domain EPB55_RS14385 PF11893 Domain of unknown function (DUF3413) EPB55_RS14385 PF00884 Sulfatase EPB55_RS14390 PF07208 Protein of unknown function (DUF1414) EPB55_RS14395 PF04245 37-kD nucleoid-associated bacterial protein EPB55_RS14410 PF03553 Na+/H+ antiporter family EPB55_RS14415 PF02774 Semialdehyde dehydrogenase, dimerisation domain EPB55_RS14415 PF01118 Semialdehyde dehydrogenase, NAD binding domain EPB55_RS14425 PF00520 Ion transport protein EPB55_RS14425 PF00027 Cyclic nucleotide-binding domain EPB55_RS14430 PF01914 MarC family integral membrane protein EPB55_RS14435 PF00465 Iron-containing alcohol dehydrogenase EPB55_RS14435 PF00171 Aldehyde dehydrogenase family EPB55_RS14450 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EPB55_RS14450 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EPB55_RS14455 PF00462 Glutaredoxin EPB55_RS14465 PF03553 Na+/H+ antiporter family EPB55_RS14465 PF13726 Na+-H+ antiporter family EPB55_RS14470 PF00929 Exonuclease EPB55_RS14475 PF18393 MotY N-terminal domain EPB55_RS14475 PF00691 OmpA family EPB55_RS14480 PF10952 Protein of unknown function (DUF2753) EPB55_RS14485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EPB55_RS14490 PF00633 Helix-hairpin-helix motif EPB55_RS14490 PF10576 Iron-sulfur binding domain of endonuclease III EPB55_RS14490 PF00730 HhH-GPD superfamily base excision DNA repair protein EPB55_RS14495 PF02508 Rnf-Nqr subunit, membrane protein EPB55_RS14500 PF04205 FMN-binding domain EPB55_RS14510 PF13375 RnfC Barrel sandwich hybrid domain EPB55_RS14510 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EPB55_RS14510 PF12838 4Fe-4S dicluster domain EPB55_RS14510 PF10531 SLBB domain EPB55_RS14515 PF04060 Putative Fe-S cluster EPB55_RS14520 PF02508 Rnf-Nqr subunit, membrane protein EPB55_RS14535 PF00271 Helicase conserved C-terminal domain EPB55_RS14535 PF17757 UvrB interaction domain EPB55_RS14535 PF02151 UvrB/uvrC motif EPB55_RS14535 PF12344 Ultra-violet resistance protein B EPB55_RS14535 PF04851 Type III restriction enzyme, res subunit EPB55_RS14540 PF02954 Bacterial regulatory protein, Fis family EPB55_RS14540 PF00072 Response regulator receiver domain EPB55_RS14540 PF00158 Sigma-54 interaction domain EPB55_RS14545 PF01627 Hpt domain EPB55_RS14550 PF01933 Uncharacterised protein family UPF0052 EPB55_RS14555 PF06463 Molybdenum Cofactor Synthesis C EPB55_RS14555 PF04055 Radical SAM superfamily EPB55_RS14560 PF00994 Probable molybdopterin binding domain EPB55_RS14565 PF01967 MoaC family EPB55_RS14570 PF02597 ThiS family EPB55_RS14575 PF02391 MoaE protein EPB55_RS14580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPB55_RS14585 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS14590 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS14590 PF12911 N-terminal TM domain of oligopeptide transport permease C EPB55_RS14595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB55_RS14595 PF00005 ABC transporter EPB55_RS14600 PF00005 ABC transporter EPB55_RS14600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB55_RS14605 PF13409 Glutathione S-transferase, N-terminal domain EPB55_RS14615 PF03795 YCII-related domain EPB55_RS14620 PF03061 Thioesterase superfamily EPB55_RS14625 PF04279 Intracellular septation protein A EPB55_RS14635 PF00375 Sodium:dicarboxylate symporter family EPB55_RS14640 PF00290 Tryptophan synthase alpha chain EPB55_RS14645 PF00291 Pyridoxal-phosphate dependent enzyme EPB55_RS14650 PF00218 Indole-3-glycerol phosphate synthase EPB55_RS14650 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EPB55_RS14655 PF02885 Glycosyl transferase family, helical bundle domain EPB55_RS14655 PF00591 Glycosyl transferase family, a/b domain EPB55_RS14660 PF00117 Glutamine amidotransferase class-I EPB55_RS14665 PF04715 Anthranilate synthase component I, N terminal region EPB55_RS14665 PF00425 chorismate binding enzyme EPB55_RS14670 PF08056 Tryptophan operon leader peptide EPB55_RS14675 PF02811 PHP domain EPB55_RS14680 PF01300 Telomere recombination EPB55_RS14690 PF01479 S4 domain EPB55_RS14690 PF00849 RNA pseudouridylate synthase EPB55_RS14695 PF04269 Protein of unknown function, DUF440 EPB55_RS14700 PF01132 Elongation factor P (EF-P) OB domain EPB55_RS14700 PF08207 Elongation factor P (EF-P) KOW-like domain EPB55_RS14700 PF09285 Elongation factor P, C-terminal EPB55_RS14710 PF08447 PAS fold EPB55_RS14710 PF00563 EAL domain EPB55_RS14710 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS14710 PF08448 PAS fold EPB55_RS14715 PF03104 DNA polymerase family B, exonuclease domain EPB55_RS14715 PF00136 DNA polymerase family B EPB55_RS14720 PF00072 Response regulator receiver domain EPB55_RS14720 PF00196 Bacterial regulatory proteins, luxR family EPB55_RS14725 PF01541 GIY-YIG catalytic domain EPB55_RS14725 PF08459 UvrC Helix-hairpin-helix N-terminal EPB55_RS14725 PF02151 UvrB/uvrC motif EPB55_RS14730 PF01066 CDP-alcohol phosphatidyltransferase EPB55_RS14755 PF00202 Aminotransferase class-III EPB55_RS14760 PF16653 Saccharopine dehydrogenase C-terminal domain EPB55_RS14760 PF03435 Saccharopine dehydrogenase NADP binding domain EPB55_RS14780 PF02464 Competence-damaged protein EPB55_RS14780 PF00994 Probable molybdopterin binding domain EPB55_RS14790 PF00268 Ribonucleotide reductase, small chain EPB55_RS14795 PF03477 ATP cone domain EPB55_RS14795 PF02867 Ribonucleotide reductase, barrel domain EPB55_RS14795 PF00317 Ribonucleotide reductase, all-alpha domain EPB55_RS14805 PF00521 DNA gyrase/topoisomerase IV, subunit A EPB55_RS14805 PF03989 DNA gyrase C-terminal domain, beta-propeller EPB55_RS14820 PF02335 Cytochrome c552 EPB55_RS14830 PF13247 4Fe-4S dicluster domain EPB55_RS14835 PF03916 Polysulphide reductase, NrfD EPB55_RS14840 PF01578 Cytochrome C assembly protein EPB55_RS14840 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EPB55_RS14845 PF08534 Redoxin EPB55_RS14850 PF03918 Cytochrome C biogenesis protein EPB55_RS14860 PF09334 tRNA synthetases class I (M) EPB55_RS14860 PF01588 Putative tRNA binding domain EPB55_RS14865 PF10609 NUBPL iron-transfer P-loop NTPase EPB55_RS14870 PF00485 Phosphoribulokinase / Uridine kinase family EPB55_RS14880 PF12557 Cob(I)alamin adenosyltransferase N terminal EPB55_RS14880 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP EPB55_RS14885 PF01451 Low molecular weight phosphotyrosine protein phosphatase EPB55_RS14890 PF00916 Sulfate permease family EPB55_RS14890 PF01740 STAS domain EPB55_RS14895 PF12111 Polyribonucleotide phosphorylase C terminal EPB55_RS14895 PF10150 Ribonuclease E/G family EPB55_RS14895 PF00575 S1 RNA binding domain EPB55_RS14900 PF01479 S4 domain EPB55_RS14900 PF00849 RNA pseudouridylate synthase EPB55_RS14905 PF02545 Maf-like protein EPB55_RS14910 PF02620 Large ribosomal RNA subunit accumulation protein YceD EPB55_RS14915 PF01783 Ribosomal L32p protein family EPB55_RS14920 PF02504 Fatty acid synthesis protein EPB55_RS14925 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EPB55_RS14925 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EPB55_RS14930 PF00698 Acyl transferase domain EPB55_RS14940 PF00550 Phosphopantetheine attachment site EPB55_RS14945 PF00109 Beta-ketoacyl synthase, N-terminal domain EPB55_RS14945 PF02801 Beta-ketoacyl synthase, C-terminal domain EPB55_RS14950 PF01063 Amino-transferase class IV EPB55_RS14955 PF02618 YceG-like family EPB55_RS14960 PF02223 Thymidylate kinase EPB55_RS14965 PF09115 DNA polymerase III, delta subunit, C terminal EPB55_RS14970 PF01026 TatD related DNase EPB55_RS14975 PF00367 phosphotransferase system, EIIB EPB55_RS14975 PF02378 Phosphotransferase system, EIIC EPB55_RS14990 PF00209 Sodium:neurotransmitter symporter family EPB55_RS15005 PF01734 Patatin-like phospholipase EPB55_RS15010 PF00224 Pyruvate kinase, barrel domain EPB55_RS15010 PF02887 Pyruvate kinase, alpha/beta domain EPB55_RS15015 PF00480 ROK family EPB55_RS15020 PF01584 CheW-like domain EPB55_RS15020 PF00072 Response regulator receiver domain EPB55_RS15025 PF01336 OB-fold nucleic acid binding domain EPB55_RS15025 PF02811 PHP domain EPB55_RS15025 PF14579 Helix-hairpin-helix motif EPB55_RS15025 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EPB55_RS15025 PF07733 Bacterial DNA polymerase III alpha NTPase domain EPB55_RS15040 PF00106 short chain dehydrogenase EPB55_RS15045 PF08496 Peptidase family S49 N-terminal EPB55_RS15045 PF01343 Peptidase family S49 EPB55_RS15050 PF02224 Cytidylate kinase EPB55_RS15055 PF00575 S1 RNA binding domain EPB55_RS15060 PF00216 Bacterial DNA-binding protein EPB55_RS15065 PF06305 Lipopolysaccharide assembly protein A domain EPB55_RS15070 PF18073 Rubredoxin metal binding domain EPB55_RS15075 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EPB55_RS15080 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS15085 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS15085 PF12911 N-terminal TM domain of oligopeptide transport permease C EPB55_RS15090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPB55_RS15095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB55_RS15095 PF00005 ABC transporter EPB55_RS15100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB55_RS15100 PF00005 ABC transporter EPB55_RS15115 PF01609 Transposase DDE domain EPB55_RS15115 PF13006 Insertion element 4 transposase N-terminal EPB55_RS15125 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) EPB55_RS15145 PF03466 LysR substrate binding domain EPB55_RS15145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS15155 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EPB55_RS15155 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EPB55_RS15160 PF01037 Lrp/AsnC ligand binding domain EPB55_RS15165 PF01580 FtsK/SpoIIIE family EPB55_RS15165 PF09397 Ftsk gamma domain EPB55_RS15165 PF17854 FtsK alpha domain EPB55_RS15165 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EPB55_RS15170 PF03548 Outer membrane lipoprotein carrier protein LolA EPB55_RS15175 PF00004 ATPase family associated with various cellular activities (AAA) EPB55_RS15175 PF16193 AAA C-terminal domain EPB55_RS15175 PF12002 MgsA AAA+ ATPase C terminal EPB55_RS15180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EPB55_RS15180 PF02403 Seryl-tRNA synthetase N-terminal domain EPB55_RS15185 PF00202 Aminotransferase class-III EPB55_RS15190 PF04055 Radical SAM superfamily EPB55_RS15190 PF06968 Biotin and Thiamin Synthesis associated domain EPB55_RS15195 PF00155 Aminotransferase class I and II EPB55_RS15200 PF08241 Methyltransferase domain EPB55_RS15210 PF01435 Peptidase family M48 EPB55_RS15255 PF08328 Adenylosuccinate lyase C-terminal EPB55_RS15255 PF00206 Lyase EPB55_RS15260 PF04356 Protein of unknown function (DUF489) EPB55_RS15275 PF00294 pfkB family carbohydrate kinase EPB55_RS15280 PF00816 H-NS histone family EPB55_RS15285 PF03553 Na+/H+ antiporter family EPB55_RS15290 PF01634 ATP phosphoribosyltransferase EPB55_RS15290 PF08029 HisG, C-terminal domain EPB55_RS15295 PF00815 Histidinol dehydrogenase EPB55_RS15300 PF00155 Aminotransferase class I and II EPB55_RS15305 PF00475 Imidazoleglycerol-phosphate dehydratase EPB55_RS15305 PF08645 Polynucleotide kinase 3 phosphatase EPB55_RS15310 PF00117 Glutamine amidotransferase class-I EPB55_RS15315 PF00977 Histidine biosynthesis protein EPB55_RS15320 PF00977 Histidine biosynthesis protein EPB55_RS15325 PF01502 Phosphoribosyl-AMP cyclohydrolase EPB55_RS15325 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EPB55_RS15330 PF02810 SEC-C motif EPB55_RS15335 PF08668 HDOD domain EPB55_RS15335 PF00563 EAL domain EPB55_RS15340 PF00149 Calcineurin-like phosphoesterase EPB55_RS15345 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EPB55_RS15350 PF01406 tRNA synthetases class I (C) catalytic domain EPB55_RS15350 PF09190 DALR domain EPB55_RS15355 PF00265 Thymidine kinase EPB55_RS15365 PF01370 NAD dependent epimerase/dehydratase family EPB55_RS15370 PF03466 LysR substrate binding domain EPB55_RS15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS15390 PF01226 Formate/nitrite transporter EPB55_RS15395 PF03649 Uncharacterised protein family (UPF0014) EPB55_RS15400 PF06796 Periplasmic nitrate reductase protein NapE EPB55_RS15405 PF03264 NapC/NirT cytochrome c family, N-terminal region EPB55_RS15410 PF00384 Molybdopterin oxidoreductase EPB55_RS15410 PF18364 Molybdopterin oxidoreductase N-terminal domain EPB55_RS15410 PF01568 Molydopterin dinucleotide binding domain EPB55_RS15430 PF16874 Glycosyl hydrolase family 36 C-terminal domain EPB55_RS15430 PF16875 Glycosyl hydrolase family 36 N-terminal domain EPB55_RS15440 PF02833 DHHA2 domain EPB55_RS15440 PF01368 DHH family EPB55_RS15455 PF00005 ABC transporter EPB55_RS15460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB55_RS15460 PF00005 ABC transporter EPB55_RS15465 PF12911 N-terminal TM domain of oligopeptide transport permease C EPB55_RS15465 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS15470 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS15475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPB55_RS15480 PF00158 Sigma-54 interaction domain EPB55_RS15480 PF02954 Bacterial regulatory protein, Fis family EPB55_RS15485 PF04012 PspA/IM30 family EPB55_RS15490 PF06667 Phage shock protein B EPB55_RS15495 PF04024 PspC domain EPB55_RS15505 PF13533 Biotin-lipoyl like EPB55_RS15510 PF00873 AcrB/AcrD/AcrF family EPB55_RS15515 PF03352 Methyladenine glycosylase EPB55_RS15520 PF01053 Cys/Met metabolism PLP-dependent enzyme EPB55_RS15525 PF13091 PLD-like domain EPB55_RS15525 PF13396 Phospholipase_D-nuclease N-terminal EPB55_RS15530 PF00209 Sodium:neurotransmitter symporter family EPB55_RS15535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS15535 PF00672 HAMP domain EPB55_RS15535 PF12729 Four helix bundle sensory module for signal transduction EPB55_RS15540 PF00849 RNA pseudouridylate synthase EPB55_RS15550 PF00175 Oxidoreductase NAD-binding domain EPB55_RS15550 PF00970 Oxidoreductase FAD-binding domain EPB55_RS15550 PF00111 2Fe-2S iron-sulfur cluster binding domain EPB55_RS15555 PF03063 Prismane/CO dehydrogenase family EPB55_RS15560 PF00158 Sigma-54 interaction domain EPB55_RS15560 PF01590 GAF domain EPB55_RS15565 PF01066 CDP-alcohol phosphatidyltransferase EPB55_RS15570 PF00005 ABC transporter EPB55_RS15575 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS15580 PF13416 Bacterial extracellular solute-binding protein EPB55_RS15590 PF06945 Protein of unknown function (DUF1289) EPB55_RS15600 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS15600 PF00563 EAL domain EPB55_RS15600 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS15615 PF01386 Ribosomal L25p family EPB55_RS15620 PF00672 HAMP domain EPB55_RS15620 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS15620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS15625 PF00486 Transcriptional regulatory protein, C terminal EPB55_RS15625 PF00072 Response regulator receiver domain EPB55_RS15635 PF04851 Type III restriction enzyme, res subunit EPB55_RS15635 PF00271 Helicase conserved C-terminal domain EPB55_RS15640 PF01479 S4 domain EPB55_RS15640 PF00849 RNA pseudouridylate synthase EPB55_RS15645 PF07690 Major Facilitator Superfamily EPB55_RS15655 PF00999 Sodium/hydrogen exchanger family EPB55_RS15660 PF13460 NAD(P)H-binding EPB55_RS15660 PF11066 Protein of unknown function (DUF2867) EPB55_RS15665 PF00005 ABC transporter EPB55_RS15680 PF06965 Na+/H+ antiporter 1 EPB55_RS15690 PF09317 Domain of unknown function (DUF1974) EPB55_RS15690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EPB55_RS15690 PF02770 Acyl-CoA dehydrogenase, middle domain EPB55_RS15690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EPB55_RS15695 PF12241 Trans-2-enoyl-CoA reductase catalytic region EPB55_RS15695 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase EPB55_RS15695 PF07055 Enoyl reductase FAD binding domain EPB55_RS15700 PF06826 Predicted Permease Membrane Region EPB55_RS15700 PF02080 TrkA-C domain EPB55_RS15705 PF00462 Glutaredoxin EPB55_RS15710 PF00465 Iron-containing alcohol dehydrogenase EPB55_RS15715 PF01380 SIS domain EPB55_RS15715 PF01418 Helix-turn-helix domain, rpiR family EPB55_RS15720 PF00282 Pyridoxal-dependent decarboxylase conserved domain EPB55_RS15730 PF03956 Lysine exporter LysO EPB55_RS15740 PF04993 TfoX N-terminal domain EPB55_RS15740 PF04994 TfoX C-terminal domain EPB55_RS15755 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS15755 PF13188 PAS domain EPB55_RS15755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS15755 PF00989 PAS fold EPB55_RS15755 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS15755 PF00989 PAS fold EPB55_RS15755 PF13188 PAS domain EPB55_RS15755 PF13426 PAS domain EPB55_RS15755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS15755 PF13426 PAS domain EPB55_RS15765 PF00266 Aminotransferase class-V EPB55_RS15770 PF00664 ABC transporter transmembrane region EPB55_RS15770 PF00005 ABC transporter EPB55_RS15775 PF00664 ABC transporter transmembrane region EPB55_RS15775 PF00005 ABC transporter EPB55_RS15780 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB55_RS15790 PF00266 Aminotransferase class-V EPB55_RS15800 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS15800 PF00072 Response regulator receiver domain EPB55_RS15805 PF13006 Insertion element 4 transposase N-terminal EPB55_RS15805 PF01609 Transposase DDE domain EPB55_RS15810 PF00939 Sodium:sulfate symporter transmembrane region EPB55_RS15815 PF02698 DUF218 domain EPB55_RS15820 PF00390 Malic enzyme, N-terminal domain EPB55_RS15820 PF03949 Malic enzyme, NAD binding domain EPB55_RS15825 PF00270 DEAD/DEAH box helicase EPB55_RS15825 PF04408 Helicase associated domain (HA2) EPB55_RS15825 PF08482 ATP-dependent helicase C-terminal EPB55_RS15825 PF00271 Helicase conserved C-terminal domain EPB55_RS15830 PF02253 Phospholipase A1 EPB55_RS15840 PF01259 SAICAR synthetase EPB55_RS15850 PF04172 LrgB-like family EPB55_RS15855 PF03788 LrgA family EPB55_RS15870 PF02277 Phosphoribosyltransferase EPB55_RS15875 PF02654 Cobalamin-5-phosphate synthase EPB55_RS15880 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase EPB55_RS15895 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EPB55_RS15905 PF00005 ABC transporter EPB55_RS15920 PF07690 Major Facilitator Superfamily EPB55_RS15925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS15925 PF03466 LysR substrate binding domain EPB55_RS15935 PF01863 Protein of unknown function DUF45 EPB55_RS15940 PF05971 RNA methyltransferase EPB55_RS15955 PF04204 Homoserine O-succinyltransferase EPB55_RS15960 PF00149 Calcineurin-like phosphoesterase EPB55_RS15960 PF02872 5'-nucleotidase, C-terminal domain EPB55_RS15965 PF07687 Peptidase dimerisation domain EPB55_RS15965 PF01546 Peptidase family M20/M25/M40 EPB55_RS15970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EPB55_RS15975 PF04209 homogentisate 1,2-dioxygenase EPB55_RS15985 PF14497 Glutathione S-transferase, C-terminal domain EPB55_RS15985 PF02798 Glutathione S-transferase, N-terminal domain EPB55_RS16030 PF00392 Bacterial regulatory proteins, gntR family EPB55_RS16030 PF00155 Aminotransferase class I and II EPB55_RS16035 PF13230 Glutamine amidotransferases class-II EPB55_RS16040 PF13520 Amino acid permease EPB55_RS16050 PF01037 Lrp/AsnC ligand binding domain EPB55_RS16055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS16055 PF03466 LysR substrate binding domain EPB55_RS16065 PF00462 Glutaredoxin EPB55_RS16065 PF08534 Redoxin EPB55_RS16075 PF13276 HTH-like domain EPB55_RS16075 PF13333 Integrase core domain EPB55_RS16075 PF00665 Integrase core domain EPB55_RS16080 PF00709 Adenylosuccinate synthetase EPB55_RS16085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS16085 PF03466 LysR substrate binding domain EPB55_RS16095 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EPB55_RS16095 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EPB55_RS16110 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS16110 PF01627 Hpt domain EPB55_RS16110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS16110 PF00672 HAMP domain EPB55_RS16110 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EPB55_RS16110 PF00072 Response regulator receiver domain EPB55_RS16115 PF01554 MatE EPB55_RS16120 PF04363 Protein of unknown function (DUF496) EPB55_RS16130 PF04337 Protein of unknown function, DUF480 EPB55_RS16135 PF01541 GIY-YIG catalytic domain EPB55_RS16145 PF13407 Periplasmic binding protein domain EPB55_RS16165 PF01037 Lrp/AsnC ligand binding domain EPB55_RS16185 PF07549 SecD/SecF GG Motif EPB55_RS16185 PF13721 SecD export protein N-terminal TM region EPB55_RS16185 PF02355 Protein export membrane protein EPB55_RS16190 PF02355 Protein export membrane protein EPB55_RS16190 PF07549 SecD/SecF GG Motif EPB55_RS16200 PF02803 Thiolase, C-terminal domain EPB55_RS16200 PF00108 Thiolase, N-terminal domain EPB55_RS16210 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus EPB55_RS16210 PF00561 alpha/beta hydrolase fold EPB55_RS16225 PF03264 NapC/NirT cytochrome c family, N-terminal region EPB55_RS16230 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) EPB55_RS16235 PF01568 Molydopterin dinucleotide binding domain EPB55_RS16235 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EPB55_RS16235 PF00384 Molybdopterin oxidoreductase EPB55_RS16245 PF12838 4Fe-4S dicluster domain EPB55_RS16245 PF13187 4Fe-4S dicluster domain EPB55_RS16250 PF07730 Histidine kinase EPB55_RS16250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS16250 PF00672 HAMP domain EPB55_RS16250 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term EPB55_RS16255 PF00072 Response regulator receiver domain EPB55_RS16255 PF00196 Bacterial regulatory proteins, luxR family EPB55_RS16275 PF01256 Carbohydrate kinase EPB55_RS16275 PF03853 YjeF-related protein N-terminus EPB55_RS16285 PF00478 IMP dehydrogenase / GMP reductase domain EPB55_RS16300 PF14760 Rnk N-terminus EPB55_RS16300 PF01272 Transcription elongation factor, GreA/GreB, C-term EPB55_RS16305 PF00583 Acetyltransferase (GNAT) family EPB55_RS16315 PF03372 Endonuclease/Exonuclease/phosphatase family EPB55_RS16330 PF00132 Bacterial transferase hexapeptide (six repeats) EPB55_RS16340 PF00270 DEAD/DEAH box helicase EPB55_RS16340 PF00271 Helicase conserved C-terminal domain EPB55_RS16355 PF01047 MarR family EPB55_RS16365 PF12706 Beta-lactamase superfamily domain EPB55_RS16375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EPB55_RS16385 PF00005 ABC transporter EPB55_RS16395 PF02685 Glucokinase EPB55_RS16395 PF01418 Helix-turn-helix domain, rpiR family EPB55_RS16395 PF01380 SIS domain EPB55_RS16405 PF07969 Amidohydrolase family EPB55_RS16415 PF00474 Sodium:solute symporter family EPB55_RS16420 PF00728 Glycosyl hydrolase family 20, catalytic domain EPB55_RS16420 PF02838 Glycosyl hydrolase family 20, domain 2 EPB55_RS16430 PF01042 Endoribonuclease L-PSP EPB55_RS16435 PF01590 GAF domain EPB55_RS16435 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS16435 PF00360 Phytochrome region EPB55_RS16435 PF00563 EAL domain EPB55_RS16440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS16440 PF03466 LysR substrate binding domain EPB55_RS16445 PF07690 Major Facilitator Superfamily EPB55_RS16455 PF00462 Glutaredoxin EPB55_RS16460 PF00892 EamA-like transporter family EPB55_RS16465 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS16465 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS16465 PF00563 EAL domain EPB55_RS16475 PF00578 AhpC/TSA family EPB55_RS16485 PF02566 OsmC-like protein EPB55_RS16490 PF01047 MarR family EPB55_RS16495 PF01557 Fumarylacetoacetate (FAA) hydrolase family EPB55_RS16515 PF01810 LysE type translocator EPB55_RS16525 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EPB55_RS16525 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EPB55_RS16525 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EPB55_RS16525 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EPB55_RS16530 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EPB55_RS16530 PF02790 Cytochrome C oxidase subunit II, transmembrane domain EPB55_RS16535 PF00115 Cytochrome C and Quinol oxidase polypeptide I EPB55_RS16540 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 EPB55_RS16565 PF02628 Cytochrome oxidase assembly protein EPB55_RS16570 PF01040 UbiA prenyltransferase family EPB55_RS16575 PF13488 Glycine zipper EPB55_RS16575 PF00691 OmpA family EPB55_RS16580 PF00793 DAHP synthetase I family EPB55_RS16585 PF08447 PAS fold EPB55_RS16585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS16590 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS16590 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS16590 PF00563 EAL domain EPB55_RS16600 PF02779 Transketolase, pyrimidine binding domain EPB55_RS16600 PF02780 Transketolase, C-terminal domain EPB55_RS16600 PF00456 Transketolase, thiamine diphosphate binding domain EPB55_RS16605 PF00923 Transaldolase/Fructose-6-phosphate aldolase EPB55_RS16615 PF00704 Glycosyl hydrolases family 18 EPB55_RS16615 PF08329 Chitinase A, N-terminal domain EPB55_RS16620 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS16620 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS16620 PF00563 EAL domain EPB55_RS16625 PF00581 Rhodanese-like domain EPB55_RS16635 PF00899 ThiF family EPB55_RS16640 PF00994 Probable molybdopterin binding domain EPB55_RS16640 PF03453 MoeA N-terminal region (domain I and II) EPB55_RS16640 PF03454 MoeA C-terminal region (domain IV) EPB55_RS16645 PF01227 GTP cyclohydrolase I EPB55_RS16650 PF01566 Natural resistance-associated macrophage protein EPB55_RS16660 PF00654 Voltage gated chloride channel EPB55_RS16680 PF00248 Aldo/keto reductase family EPB55_RS16690 PF01546 Peptidase family M20/M25/M40 EPB55_RS16690 PF07687 Peptidase dimerisation domain EPB55_RS16695 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EPB55_RS16700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EPB55_RS16705 PF00873 AcrB/AcrD/AcrF family EPB55_RS16710 PF12729 Four helix bundle sensory module for signal transduction EPB55_RS16710 PF00672 HAMP domain EPB55_RS16710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS16715 PF13419 Haloacid dehalogenase-like hydrolase EPB55_RS16720 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EPB55_RS16720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EPB55_RS16725 PF01323 DSBA-like thioredoxin domain EPB55_RS16750 PF00313 'Cold-shock' DNA-binding domain EPB55_RS16755 PF03889 Alternative ribosome-rescue factor A EPB55_RS16765 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS16775 PF01238 Phosphomannose isomerase type I EPB55_RS16780 PF07690 Major Facilitator Superfamily EPB55_RS16785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS16785 PF07730 Histidine kinase EPB55_RS16785 PF05231 MASE1 EPB55_RS16790 PF00072 Response regulator receiver domain EPB55_RS16790 PF00196 Bacterial regulatory proteins, luxR family EPB55_RS16795 PF07690 Major Facilitator Superfamily EPB55_RS16810 PF16884 N-terminal domain of oxidoreductase EPB55_RS16810 PF00107 Zinc-binding dehydrogenase EPB55_RS16815 PF00440 Bacterial regulatory proteins, tetR family EPB55_RS16815 PF16925 Tetracyclin repressor-like, C-terminal domain EPB55_RS16820 PF01699 Sodium/calcium exchanger protein EPB55_RS16830 PF00313 'Cold-shock' DNA-binding domain EPB55_RS16835 PF13192 Thioredoxin domain EPB55_RS16835 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB55_RS16840 PF00578 AhpC/TSA family EPB55_RS16840 PF10417 C-terminal domain of 1-Cys peroxiredoxin EPB55_RS16845 PF00682 HMGL-like EPB55_RS16850 PF00378 Enoyl-CoA hydratase/isomerase EPB55_RS16855 PF01039 Carboxyl transferase domain EPB55_RS16860 PF02770 Acyl-CoA dehydrogenase, middle domain EPB55_RS16860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EPB55_RS16860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EPB55_RS16865 PF09278 MerR, DNA binding EPB55_RS16865 PF00376 MerR family regulatory protein EPB55_RS16870 PF00108 Thiolase, N-terminal domain EPB55_RS16870 PF02803 Thiolase, C-terminal domain EPB55_RS16875 PF00171 Aldehyde dehydrogenase family EPB55_RS16880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EPB55_RS16880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EPB55_RS16880 PF02770 Acyl-CoA dehydrogenase, middle domain EPB55_RS16885 PF00378 Enoyl-CoA hydratase/isomerase EPB55_RS16890 PF00378 Enoyl-CoA hydratase/isomerase EPB55_RS16895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EPB55_RS16895 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EPB55_RS16905 PF00664 ABC transporter transmembrane region EPB55_RS16905 PF03412 Peptidase C39 family EPB55_RS16905 PF00005 ABC transporter EPB55_RS16915 PF00005 ABC transporter EPB55_RS16915 PF00664 ABC transporter transmembrane region EPB55_RS16915 PF03412 Peptidase C39 family EPB55_RS16925 PF02794 RTX toxin acyltransferase family EPB55_RS16930 PF16671 Actin cross-linking domain EPB55_RS16930 PF11713 Peptidase C80 family EPB55_RS16930 PF11647 Membrane Localization Domain EPB55_RS16930 PF12146 Serine aminopeptidase, S33 EPB55_RS16930 PF07634 RtxA repeat EPB55_RS16935 PF00842 Alanine racemase, C-terminal domain EPB55_RS16935 PF01168 Alanine racemase, N-terminal domain EPB55_RS16940 PF00672 HAMP domain EPB55_RS16940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS16950 PF01012 Electron transfer flavoprotein domain EPB55_RS16955 PF00766 Electron transfer flavoprotein FAD-binding domain EPB55_RS16955 PF01012 Electron transfer flavoprotein domain EPB55_RS16960 PF00364 Biotin-requiring enzyme EPB55_RS16960 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EPB55_RS16960 PF02817 e3 binding domain EPB55_RS16965 PF02779 Transketolase, pyrimidine binding domain EPB55_RS16965 PF02780 Transketolase, C-terminal domain EPB55_RS16970 PF00676 Dehydrogenase E1 component EPB55_RS16975 PF00962 Adenosine/AMP deaminase EPB55_RS16985 PF11849 Domain of unknown function (DUF3369) EPB55_RS16990 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS16990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS16990 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPB55_RS17005 PF00892 EamA-like transporter family EPB55_RS17015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS17015 PF03466 LysR substrate binding domain EPB55_RS17025 PF13193 AMP-binding enzyme C-terminal domain EPB55_RS17025 PF00501 AMP-binding enzyme EPB55_RS17030 PF00351 Biopterin-dependent aromatic amino acid hydroxylase EPB55_RS17035 PF01329 Pterin 4 alpha carbinolamine dehydratase EPB55_RS17040 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS17040 PF00563 EAL domain EPB55_RS17040 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS17055 PF12843 Putative quorum-sensing-regulated virulence factor EPB55_RS17075 PF03793 PASTA domain EPB55_RS17075 PF00069 Protein kinase domain EPB55_RS17090 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE EPB55_RS17095 PF00691 OmpA family EPB55_RS17095 PF13677 Membrane MotB of proton-channel complex MotA/MotB EPB55_RS17100 PF06744 Type VI secretion protein IcmF C-terminal EPB55_RS17100 PF06761 Intracellular multiplication and human macrophage-killing EPB55_RS17100 PF14331 ImcF-related N-terminal domain EPB55_RS17120 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 EPB55_RS17125 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath EPB55_RS17130 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath EPB55_RS17135 PF07024 ImpE protein EPB55_RS17145 PF05947 Type VI secretion system, TssF EPB55_RS17155 PF10431 C-terminal, D2-small domain, of ClpB protein EPB55_RS17155 PF00004 ATPase family associated with various cellular activities (AAA) EPB55_RS17155 PF07724 AAA domain (Cdc48 subfamily) EPB55_RS17155 PF17871 AAA lid domain EPB55_RS17165 PF06715 Gp5 C-terminal repeat (3 copies) EPB55_RS17165 PF04717 Type VI secretion system, phage-baseplate injector EPB55_RS17215 PF13737 Transposase DDE domain EPB55_RS17225 PF04634 Protein of unknown function, DUF600 EPB55_RS17270 PF01435 Peptidase family M48 EPB55_RS17275 PF04011 LemA family EPB55_RS17280 PF03606 C4-dicarboxylate anaerobic carrier EPB55_RS17285 PF07963 Prokaryotic N-terminal methylation motif EPB55_RS17285 PF08334 Type II secretion system (T2SS), protein G EPB55_RS17290 PF01523 Putative modulator of DNA gyrase EPB55_RS17295 PF01523 Putative modulator of DNA gyrase EPB55_RS17300 PF03009 Glycerophosphoryl diester phosphodiesterase family EPB55_RS17305 PF07690 Major Facilitator Superfamily EPB55_RS17310 PF07968 Leukocidin/Hemolysin toxin family EPB55_RS17310 PF00652 Ricin-type beta-trefoil lectin domain EPB55_RS17320 PF00672 HAMP domain EPB55_RS17320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS17325 PF00672 HAMP domain EPB55_RS17325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS17330 PF00128 Alpha amylase, catalytic domain EPB55_RS17335 PF00583 Acetyltransferase (GNAT) family EPB55_RS17335 PF00814 Glycoprotease family EPB55_RS17340 PF04324 BFD-like [2Fe-2S] binding domain EPB55_RS17340 PF01568 Molydopterin dinucleotide binding domain EPB55_RS17340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EPB55_RS17340 PF00384 Molybdopterin oxidoreductase EPB55_RS17345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EPB55_RS17345 PF14824 Sirohaem biosynthesis protein central EPB55_RS17345 PF10414 Sirohaem synthase dimerisation region EPB55_RS17350 PF02885 Glycosyl transferase family, helical bundle domain EPB55_RS17350 PF00591 Glycosyl transferase family, a/b domain EPB55_RS17355 PF01738 Dienelactone hydrolase family EPB55_RS17360 PF08376 Nitrate and nitrite sensing EPB55_RS17360 PF03861 ANTAR domain EPB55_RS17365 PF00005 ABC transporter EPB55_RS17370 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS17375 PF00005 ABC transporter EPB55_RS17395 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS17395 PF00072 Response regulator receiver domain EPB55_RS17405 PF07683 Cobalamin synthesis protein cobW C-terminal domain EPB55_RS17405 PF02492 CobW/HypB/UreG, nucleotide-binding domain EPB55_RS17415 PF00271 Helicase conserved C-terminal domain EPB55_RS17415 PF00270 DEAD/DEAH box helicase EPB55_RS17420 PF00491 Arginase family EPB55_RS17430 PF00360 Phytochrome region EPB55_RS17430 PF01590 GAF domain EPB55_RS17430 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS17430 PF00563 EAL domain EPB55_RS17435 PF01339 CheB methylesterase EPB55_RS17440 PF03705 CheR methyltransferase, all-alpha domain EPB55_RS17440 PF01739 CheR methyltransferase, SAM binding domain EPB55_RS17445 PF00672 HAMP domain EPB55_RS17445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS17445 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS17445 PF01627 Hpt domain EPB55_RS17445 PF00072 Response regulator receiver domain EPB55_RS17445 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EPB55_RS17450 PF01575 MaoC like domain EPB55_RS17475 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB55_RS17475 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EPB55_RS17475 PF18267 Rubredoxin NAD+ reductase C-terminal domain EPB55_RS17475 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EPB55_RS17475 PF04324 BFD-like [2Fe-2S] binding domain EPB55_RS17480 PF13806 Rieske-like [2Fe-2S] domain EPB55_RS17490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EPB55_RS17490 PF14824 Sirohaem biosynthesis protein central EPB55_RS17490 PF10414 Sirohaem synthase dimerisation region EPB55_RS17510 PF01618 MotA/TolQ/ExbB proton channel family EPB55_RS17515 PF01618 MotA/TolQ/ExbB proton channel family EPB55_RS17520 PF02472 Biopolymer transport protein ExbD/TolR EPB55_RS17535 PF03605 Anaerobic c4-dicarboxylate membrane transporter EPB55_RS17540 PF00672 HAMP domain EPB55_RS17540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS17540 PF17200 Single Cache domain 2 EPB55_RS17550 PF11756 Nitrous oxide-stimulated promoter EPB55_RS17555 PF01554 MatE EPB55_RS17560 PF12833 Helix-turn-helix domain EPB55_RS17565 PF07690 Major Facilitator Superfamily EPB55_RS17570 PF00085 Thioredoxin EPB55_RS17575 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EPB55_RS17575 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EPB55_RS17590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPB55_RS17590 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB55_RS17605 PF04143 Sulphur transport EPB55_RS17620 PF00873 AcrB/AcrD/AcrF family EPB55_RS17630 PF03477 ATP cone domain EPB55_RS17630 PF13597 Anaerobic ribonucleoside-triphosphate reductase EPB55_RS17640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS17640 PF00672 HAMP domain EPB55_RS17640 PF12729 Four helix bundle sensory module for signal transduction EPB55_RS17645 PF00155 Aminotransferase class I and II EPB55_RS17650 PF08443 RimK-like ATP-grasp domain EPB55_RS17650 PF18030 RimK PreATP-grasp domain EPB55_RS17665 PF07685 CobB/CobQ-like glutamine amidotransferase domain EPB55_RS17665 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EPB55_RS17675 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS17680 PF03459 TOBE domain EPB55_RS17680 PF00005 ABC transporter EPB55_RS17685 PF00892 EamA-like transporter family EPB55_RS17690 PF01047 MarR family EPB55_RS17700 PF08448 PAS fold EPB55_RS17700 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS17710 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS17710 PF00072 Response regulator receiver domain EPB55_RS17725 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EPB55_RS17725 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EPB55_RS17725 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EPB55_RS17730 PF02233 NAD(P) transhydrogenase beta subunit EPB55_RS17740 PF00486 Transcriptional regulatory protein, C terminal EPB55_RS17740 PF00072 Response regulator receiver domain EPB55_RS17755 PF03701 Uncharacterised protein family (UPF0181) EPB55_RS17845 PF01253 Translation initiation factor SUI1 EPB55_RS17855 PF01820 D-ala D-ala ligase N-terminus EPB55_RS17855 PF07478 D-ala D-ala ligase C-terminus EPB55_RS17860 PF05036 Sporulation related domain EPB55_RS17865 PF13380 CoA binding domain EPB55_RS17865 PF00583 Acetyltransferase (GNAT) family EPB55_RS17865 PF13607 Succinyl-CoA ligase like flavodoxin domain EPB55_RS17870 PF03466 LysR substrate binding domain EPB55_RS17870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS17875 PF00593 TonB dependent receptor EPB55_RS17875 PF04886 PT repeat EPB55_RS17875 PF07715 TonB-dependent Receptor Plug Domain EPB55_RS17880 PF13426 PAS domain EPB55_RS17880 PF05231 MASE1 EPB55_RS17880 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS17880 PF00563 EAL domain EPB55_RS17880 PF08448 PAS fold EPB55_RS17880 PF08447 PAS fold EPB55_RS17890 PF03746 LamB/YcsF family EPB55_RS17895 PF02682 Carboxyltransferase domain, subdomain C and D EPB55_RS17900 PF02626 Carboxyltransferase domain, subdomain A and B EPB55_RS17905 PF05430 S-adenosyl-L-methionine-dependent methyltransferase EPB55_RS17905 PF01266 FAD dependent oxidoreductase EPB55_RS17915 PF00005 ABC transporter EPB55_RS17920 PF13472 GDSL-like Lipase/Acylhydrolase family EPB55_RS17925 PF12241 Trans-2-enoyl-CoA reductase catalytic region EPB55_RS17925 PF07055 Enoyl reductase FAD binding domain EPB55_RS17925 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase EPB55_RS17930 PF00498 FHA domain EPB55_RS17930 PF00563 EAL domain EPB55_RS17930 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS17945 PF00226 DnaJ domain EPB55_RS17945 PF01556 DnaJ C terminal domain EPB55_RS17945 PF00684 DnaJ central domain EPB55_RS17965 PF03466 LysR substrate binding domain EPB55_RS17965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS17970 PF16657 Maltogenic Amylase, C-terminal domain EPB55_RS17970 PF00128 Alpha amylase, catalytic domain EPB55_RS17980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPB55_RS17980 PF12793 Sugar transport-related sRNA regulator N-term EPB55_RS17990 PF03061 Thioesterase superfamily EPB55_RS18005 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EPB55_RS18010 PF12262 Bacterial virulence factor lipase N-terminal EPB55_RS18025 PF00491 Arginase family EPB55_RS18030 PF00892 EamA-like transporter family EPB55_RS18040 PF03741 Integral membrane protein TerC family EPB55_RS18045 PF02872 5'-nucleotidase, C-terminal domain EPB55_RS18045 PF00149 Calcineurin-like phosphoesterase EPB55_RS18050 PF11398 Protein of unknown function (DUF2813) EPB55_RS18055 PF06496 Protein of unknown function (DUF1097) EPB55_RS18060 PF03466 LysR substrate binding domain EPB55_RS18060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS18065 PF01226 Formate/nitrite transporter EPB55_RS18070 PF13006 Insertion element 4 transposase N-terminal EPB55_RS18070 PF01609 Transposase DDE domain EPB55_RS18075 PF04264 YceI-like domain EPB55_RS18080 PF01292 Prokaryotic cytochrome b561 EPB55_RS18095 PF00270 DEAD/DEAH box helicase EPB55_RS18095 PF00271 Helicase conserved C-terminal domain EPB55_RS18100 PF04336 Acyl carrier protein phosphodiesterase EPB55_RS18105 PF00672 HAMP domain EPB55_RS18105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS18110 PF13419 Haloacid dehalogenase-like hydrolase EPB55_RS18115 PF11849 Domain of unknown function (DUF3369) EPB55_RS18130 PF00294 pfkB family carbohydrate kinase EPB55_RS18135 PF01268 Formate--tetrahydrofolate ligase EPB55_RS18140 PF00483 Nucleotidyl transferase EPB55_RS18145 PF06483 Chitinase C EPB55_RS18145 PF00704 Glycosyl hydrolases family 18 EPB55_RS18150 PF06719 AraC-type transcriptional regulator N-terminus EPB55_RS18150 PF12833 Helix-turn-helix domain EPB55_RS18155 PF00465 Iron-containing alcohol dehydrogenase EPB55_RS18160 PF02954 Bacterial regulatory protein, Fis family EPB55_RS18160 PF00072 Response regulator receiver domain EPB55_RS18160 PF14532 Sigma-54 interaction domain EPB55_RS18165 PF02743 Cache domain EPB55_RS18165 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS18165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS18175 PF07690 Major Facilitator Superfamily EPB55_RS18180 PF02887 Pyruvate kinase, alpha/beta domain EPB55_RS18180 PF00224 Pyruvate kinase, barrel domain EPB55_RS18205 PF00356 Bacterial regulatory proteins, lacI family EPB55_RS18205 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EPB55_RS18210 PF00381 PTS HPr component phosphorylation site EPB55_RS18210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EPB55_RS18215 PF00294 pfkB family carbohydrate kinase EPB55_RS18220 PF02378 Phosphotransferase system, EIIC EPB55_RS18220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPB55_RS18230 PF00873 AcrB/AcrD/AcrF family EPB55_RS18255 PF08669 Glycine cleavage T-protein C-terminal barrel domain EPB55_RS18255 PF01571 Aminomethyltransferase folate-binding domain EPB55_RS18265 PF00464 Serine hydroxymethyltransferase EPB55_RS18270 PF01597 Glycine cleavage H-protein EPB55_RS18285 PF00005 ABC transporter EPB55_RS18285 PF00664 ABC transporter transmembrane region EPB55_RS18295 PF02540 NAD synthase EPB55_RS18295 PF00795 Carbon-nitrogen hydrolase EPB55_RS18325 PF02627 Carboxymuconolactone decarboxylase family EPB55_RS18330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS18330 PF03466 LysR substrate binding domain EPB55_RS18345 PF13533 Biotin-lipoyl like EPB55_RS18350 PF07690 Major Facilitator Superfamily EPB55_RS18355 PF13006 Insertion element 4 transposase N-terminal EPB55_RS18355 PF01609 Transposase DDE domain EPB55_RS18375 PF18081 Fanconi anemia-associated nuclease SAP domain EPB55_RS18375 PF08774 VRR-NUC domain EPB55_RS18385 PF13186 Iron-sulfur cluster-binding domain EPB55_RS18385 PF04055 Radical SAM superfamily EPB55_RS18390 PF03781 Sulfatase-modifying factor enzyme 1 EPB55_RS18395 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase EPB55_RS18400 PF03466 LysR substrate binding domain EPB55_RS18400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS18415 PF00092 von Willebrand factor type A domain EPB55_RS18430 PF07726 ATPase family associated with various cellular activities (AAA) EPB55_RS18430 PF17863 AAA lid domain EPB55_RS18435 PF04055 Radical SAM superfamily EPB55_RS18435 PF13186 Iron-sulfur cluster-binding domain EPB55_RS18440 PF00884 Sulfatase EPB55_RS18445 PF03466 LysR substrate binding domain EPB55_RS18445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS18450 PF00884 Sulfatase EPB55_RS18455 PF00871 Acetokinase family EPB55_RS18460 PF00270 DEAD/DEAH box helicase EPB55_RS18460 PF00271 Helicase conserved C-terminal domain EPB55_RS18460 PF03880 DbpA RNA binding domain EPB55_RS18465 PF08206 Ribonuclease B OB domain EPB55_RS18465 PF00773 RNB domain EPB55_RS18465 PF00575 S1 RNA binding domain EPB55_RS18470 PF12833 Helix-turn-helix domain EPB55_RS18480 PF12849 PBP superfamily domain EPB55_RS18490 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS18490 PF00563 EAL domain EPB55_RS18490 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS18505 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS18505 PF00498 FHA domain EPB55_RS18505 PF00563 EAL domain EPB55_RS18510 PF00072 Response regulator receiver domain EPB55_RS18510 PF09456 RcsC Alpha-Beta-Loop (ABL) EPB55_RS18510 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS18510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS18515 PF03880 DbpA RNA binding domain EPB55_RS18515 PF00271 Helicase conserved C-terminal domain EPB55_RS18515 PF00270 DEAD/DEAH box helicase EPB55_RS18525 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) EPB55_RS18540 PF03264 NapC/NirT cytochrome c family, N-terminal region EPB55_RS18545 PF03781 Sulfatase-modifying factor enzyme 1 EPB55_RS18565 PF00672 HAMP domain EPB55_RS18565 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS18565 PF01627 Hpt domain EPB55_RS18565 PF00072 Response regulator receiver domain EPB55_RS18565 PF17149 Periplasmic sensor domain found in signal transduction proteins EPB55_RS18565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS18570 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EPB55_RS18575 PF02142 MGS-like domain EPB55_RS18580 PF00580 UvrD/REP helicase N-terminal domain EPB55_RS18580 PF13361 UvrD-like helicase C-terminal domain EPB55_RS18580 PF12462 DNA helicase IV / RNA helicase N terminal EPB55_RS18585 PF12805 FUSC-like inner membrane protein yccS EPB55_RS18615 PF13411 MerR HTH family regulatory protein EPB55_RS18620 PF00005 ABC transporter EPB55_RS18625 PF01032 FecCD transport family EPB55_RS18630 PF01032 FecCD transport family EPB55_RS18650 PF00132 Bacterial transferase hexapeptide (six repeats) EPB55_RS18650 PF12464 Maltose acetyltransferase EPB55_RS18655 PF12431 Transcriptional regulator EPB55_RS18655 PF00072 Response regulator receiver domain EPB55_RS18660 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain EPB55_RS18660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS18660 PF17203 Single cache domain 3 EPB55_RS18660 PF00989 PAS fold EPB55_RS18665 PF00939 Sodium:sulfate symporter transmembrane region EPB55_RS18735 PF00437 Type II/IV secretion system protein EPB55_RS18750 PF04972 BON domain EPB55_RS18750 PF00263 Bacterial type II and III secretion system protein EPB55_RS18750 PF13629 Pilus formation protein N terminal region EPB55_RS18770 PF03466 LysR substrate binding domain EPB55_RS18770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS18780 PF13476 AAA domain EPB55_RS18785 PF00149 Calcineurin-like phosphoesterase EPB55_RS18785 PF12320 Type 5 capsule protein repressor C-terminal domain EPB55_RS18790 PF00072 Response regulator receiver domain EPB55_RS18795 PF00672 HAMP domain EPB55_RS18795 PF01627 Hpt domain EPB55_RS18795 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS18795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS18795 PF00072 Response regulator receiver domain EPB55_RS18795 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EPB55_RS18805 PF13581 Histidine kinase-like ATPase domain EPB55_RS18815 PF08678 Rsbr N terminal EPB55_RS18815 PF01740 STAS domain EPB55_RS18820 PF00672 HAMP domain EPB55_RS18820 PF12729 Four helix bundle sensory module for signal transduction EPB55_RS18820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS18825 PF01926 50S ribosome-binding GTPase EPB55_RS18830 PF00583 Acetyltransferase (GNAT) family EPB55_RS18840 PF01584 CheW-like domain EPB55_RS18840 PF00072 Response regulator receiver domain EPB55_RS18850 PF00356 Bacterial regulatory proteins, lacI family EPB55_RS18855 PF00294 pfkB family carbohydrate kinase EPB55_RS18860 PF13407 Periplasmic binding protein domain EPB55_RS18865 PF02653 Branched-chain amino acid transport system / permease component EPB55_RS18870 PF00005 ABC transporter EPB55_RS18875 PF05025 RbsD / FucU transport protein family EPB55_RS18890 PF04237 YjbR EPB55_RS18895 PF05762 VWA domain containing CoxE-like protein EPB55_RS18900 PF12592 Protein of unknown function (DUF3763) EPB55_RS18900 PF17868 AAA lid domain EPB55_RS18900 PF07728 AAA domain (dynein-related subfamily) EPB55_RS18910 PF01212 Beta-eliminating lyase EPB55_RS18915 PF00034 Cytochrome c EPB55_RS18920 PF00171 Aldehyde dehydrogenase family EPB55_RS18925 PF03606 C4-dicarboxylate anaerobic carrier EPB55_RS18935 PF01569 PAP2 superfamily EPB55_RS18940 PF04266 ASCH domain EPB55_RS18950 PF00892 EamA-like transporter family EPB55_RS18955 PF18416 N-acetylglucosamine binding protein domain 2 EPB55_RS18955 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading EPB55_RS18965 PF00672 HAMP domain EPB55_RS18965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS18965 PF02743 Cache domain EPB55_RS18975 PF00149 Calcineurin-like phosphoesterase EPB55_RS18980 PF03222 Tryptophan/tyrosine permease family EPB55_RS19000 PF02868 Thermolysin metallopeptidase, alpha-helical domain EPB55_RS19000 PF03413 Peptidase propeptide and YPEB domain EPB55_RS19000 PF07504 Fungalysin/Thermolysin Propeptide Motif EPB55_RS19000 PF01447 Thermolysin metallopeptidase, catalytic domain EPB55_RS19005 PF13194 Domain of unknown function (DUF4010) EPB55_RS19010 PF00873 AcrB/AcrD/AcrF family EPB55_RS19015 PF13533 Biotin-lipoyl like EPB55_RS19040 PF00581 Rhodanese-like domain EPB55_RS19045 PF00012 Hsp70 protein EPB55_RS19050 PF00465 Iron-containing alcohol dehydrogenase EPB55_RS19060 PF07995 Glucose / Sorbosone dehydrogenase EPB55_RS19065 PF17676 LD-carboxypeptidase C-terminal domain EPB55_RS19065 PF02016 LD-carboxypeptidase N-terminal domain EPB55_RS19075 PF13419 Haloacid dehalogenase-like hydrolase EPB55_RS19080 PF13183 4Fe-4S dicluster domain EPB55_RS19080 PF02754 Cysteine-rich domain EPB55_RS19085 PF00890 FAD binding domain EPB55_RS19090 PF01266 FAD dependent oxidoreductase EPB55_RS19090 PF04324 BFD-like [2Fe-2S] binding domain EPB55_RS19110 PF03618 Kinase/pyrophosphorylase EPB55_RS19115 PF02896 PEP-utilising enzyme, TIM barrel domain EPB55_RS19115 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EPB55_RS19115 PF00391 PEP-utilising enzyme, mobile domain EPB55_RS19120 PF04224 Protein of unknown function, DUF417 EPB55_RS19125 PF00571 CBS domain EPB55_RS19125 PF00005 ABC transporter EPB55_RS19130 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS19135 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EPB55_RS19140 PF05199 GMC oxidoreductase EPB55_RS19140 PF00732 GMC oxidoreductase EPB55_RS19145 PF00171 Aldehyde dehydrogenase family EPB55_RS19150 PF13977 BetI-type transcriptional repressor, C-terminal EPB55_RS19150 PF00440 Bacterial regulatory proteins, tetR family EPB55_RS19170 PF00768 D-alanyl-D-alanine carboxypeptidase EPB55_RS19170 PF07943 Penicillin-binding protein 5, C-terminal domain EPB55_RS19190 PF03313 Serine dehydratase alpha chain EPB55_RS19190 PF03315 Serine dehydratase beta chain EPB55_RS19195 PF00854 POT family EPB55_RS19205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS19205 PF03466 LysR substrate binding domain EPB55_RS19210 PF01266 FAD dependent oxidoreductase EPB55_RS19220 PF07702 UTRA domain EPB55_RS19220 PF00392 Bacterial regulatory proteins, gntR family EPB55_RS19225 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS19230 PF00005 ABC transporter EPB55_RS19240 PF00266 Aminotransferase class-V EPB55_RS19245 PF00202 Aminotransferase class-III EPB55_RS19250 PF13419 Haloacid dehalogenase-like hydrolase EPB55_RS19255 PF01497 Periplasmic binding protein EPB55_RS19255 PF12833 Helix-turn-helix domain EPB55_RS19260 PF00155 Aminotransferase class I and II EPB55_RS19270 PF00672 HAMP domain EPB55_RS19270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS19285 PF13419 Haloacid dehalogenase-like hydrolase EPB55_RS19290 PF03466 LysR substrate binding domain EPB55_RS19290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS19305 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal EPB55_RS19305 PF14602 Hexapeptide repeat of succinyl-transferase EPB55_RS19305 PF00132 Bacterial transferase hexapeptide (six repeats) EPB55_RS19310 PF02566 OsmC-like protein EPB55_RS19315 PF01625 Peptide methionine sulfoxide reductase EPB55_RS19315 PF01641 SelR domain EPB55_RS19320 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS19335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS19335 PF12729 Four helix bundle sensory module for signal transduction EPB55_RS19335 PF00672 HAMP domain EPB55_RS19340 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS19340 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS19340 PF00563 EAL domain EPB55_RS19355 PF07670 Nucleoside recognition EPB55_RS19355 PF07662 Na+ dependent nucleoside transporter C-terminus EPB55_RS19355 PF01773 Na+ dependent nucleoside transporter N-terminus EPB55_RS19380 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EPB55_RS19380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EPB55_RS19395 PF13419 Haloacid dehalogenase-like hydrolase EPB55_RS19400 PF01476 LysM domain EPB55_RS19400 PF08525 Opacity-associated protein A N-terminal motif EPB55_RS19400 PF01551 Peptidase family M23 EPB55_RS19435 PF00672 HAMP domain EPB55_RS19435 PF02743 Cache domain EPB55_RS19435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS19440 PF02743 Cache domain EPB55_RS19440 PF00672 HAMP domain EPB55_RS19440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS19445 PF00128 Alpha amylase, catalytic domain EPB55_RS19450 PF00582 Universal stress protein family EPB55_RS19460 PF01584 CheW-like domain EPB55_RS19460 PF00072 Response regulator receiver domain EPB55_RS19470 PF01243 Pyridoxamine 5'-phosphate oxidase EPB55_RS19475 PF06228 Haem utilisation ChuX/HutX EPB55_RS19480 PF04055 Radical SAM superfamily EPB55_RS19485 PF03544 Gram-negative bacterial TonB protein C-terminal EPB55_RS19490 PF01618 MotA/TolQ/ExbB proton channel family EPB55_RS19495 PF02472 Biopolymer transport protein ExbD/TolR EPB55_RS19505 PF01032 FecCD transport family EPB55_RS19510 PF00005 ABC transporter EPB55_RS19555 PF02540 NAD synthase EPB55_RS19560 PF03476 MOSC N-terminal beta barrel domain EPB55_RS19560 PF03476 MOSC N-terminal beta barrel domain EPB55_RS19560 PF03473 MOSC domain EPB55_RS19560 PF00111 2Fe-2S iron-sulfur cluster binding domain EPB55_RS19560 PF00111 2Fe-2S iron-sulfur cluster binding domain EPB55_RS19560 PF03473 MOSC domain EPB55_RS19565 PF01979 Amidohydrolase family EPB55_RS19570 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS19570 PF17151 Periplasmic sensor domain EPB55_RS19575 PF05661 Protein of unknown function (DUF808) EPB55_RS19605 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS19610 PF14785 Maltose transport system permease protein MalF P2 domain EPB55_RS19610 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS19615 PF01547 Bacterial extracellular solute-binding protein EPB55_RS19620 PF08402 TOBE domain EPB55_RS19620 PF00005 ABC transporter EPB55_RS19625 PF02397 Bacterial sugar transferase EPB55_RS19635 PF02563 Polysaccharide biosynthesis/export protein EPB55_RS19635 PF10531 SLBB domain EPB55_RS19640 PF13614 AAA domain EPB55_RS19640 PF13807 G-rich domain on putative tyrosine kinase EPB55_RS19640 PF02706 Chain length determinant protein EPB55_RS19645 PF00534 Glycosyl transferases group 1 EPB55_RS19645 PF13439 Glycosyltransferase Family 4 EPB55_RS19655 PF00534 Glycosyl transferases group 1 EPB55_RS19655 PF13439 Glycosyltransferase Family 4 EPB55_RS19670 PF00529 HlyD membrane-fusion protein of T1SS EPB55_RS19675 PF00664 ABC transporter transmembrane region EPB55_RS19675 PF00005 ABC transporter EPB55_RS19685 PF00196 Bacterial regulatory proteins, luxR family EPB55_RS19690 PF00196 Bacterial regulatory proteins, luxR family EPB55_RS19700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS19700 PF00672 HAMP domain EPB55_RS19700 PF02743 Cache domain EPB55_RS19705 PF07726 ATPase family associated with various cellular activities (AAA) EPB55_RS19705 PF17863 AAA lid domain EPB55_RS19710 PF01882 Protein of unknown function DUF58 EPB55_RS19725 PF07584 Aerotolerance regulator N-terminal EPB55_RS19725 PF00092 von Willebrand factor type A domain EPB55_RS19735 PF01590 GAF domain EPB55_RS19735 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS19735 PF00563 EAL domain EPB55_RS19735 PF00360 Phytochrome region EPB55_RS19740 PF00005 ABC transporter EPB55_RS19745 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS19750 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS19755 PF12849 PBP superfamily domain EPB55_RS19760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS19760 PF00672 HAMP domain EPB55_RS19760 PF12729 Four helix bundle sensory module for signal transduction EPB55_RS19765 PF02743 Cache domain EPB55_RS19765 PF00672 HAMP domain EPB55_RS19765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS19785 PF00593 TonB dependent receptor EPB55_RS19785 PF07715 TonB-dependent Receptor Plug Domain EPB55_RS19790 PF00326 Prolyl oligopeptidase family EPB55_RS19790 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EPB55_RS19795 PF00271 Helicase conserved C-terminal domain EPB55_RS19795 PF00270 DEAD/DEAH box helicase EPB55_RS19805 PF17969 L,D-transpeptidase C-terminal domain EPB55_RS19805 PF03734 L,D-transpeptidase catalytic domain EPB55_RS19805 PF01476 LysM domain EPB55_RS19810 PF00875 DNA photolyase EPB55_RS19810 PF03441 FAD binding domain of DNA photolyase EPB55_RS19815 PF13411 MerR HTH family regulatory protein EPB55_RS19820 PF08349 Protein of unknown function (DUF1722) EPB55_RS19825 PF01048 Phosphorylase superfamily EPB55_RS19840 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS19845 PF11742 Protein of unknown function (DUF3302) EPB55_RS19850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EPB55_RS19850 PF00529 HlyD membrane-fusion protein of T1SS EPB55_RS19855 PF07155 ECF-type riboflavin transporter, S component EPB55_RS19860 PF00005 ABC transporter EPB55_RS19860 PF12558 ATP-binding cassette cobalt transporter EPB55_RS19875 PF14684 Tricorn protease C1 domain EPB55_RS19875 PF14685 Tricorn protease PDZ domain EPB55_RS19875 PF07676 WD40-like Beta Propeller Repeat EPB55_RS19875 PF03572 Peptidase family S41 EPB55_RS19880 PF13302 Acetyltransferase (GNAT) domain EPB55_RS19890 PF07238 PilZ domain EPB55_RS19890 PF12945 Flagellar protein YcgR EPB55_RS19895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS19895 PF00672 HAMP domain EPB55_RS19905 PF00924 Mechanosensitive ion channel EPB55_RS19910 PF00194 Eukaryotic-type carbonic anhydrase EPB55_RS19915 PF12849 PBP superfamily domain EPB55_RS19925 PF02321 Outer membrane efflux protein EPB55_RS19930 PF00529 HlyD membrane-fusion protein of T1SS EPB55_RS19935 PF00664 ABC transporter transmembrane region EPB55_RS19935 PF00005 ABC transporter EPB55_RS19935 PF03412 Peptidase C39 family EPB55_RS19945 PF04076 Bacterial OB fold (BOF) protein EPB55_RS19950 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS19950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS19950 PF00072 Response regulator receiver domain EPB55_RS19950 PF09456 RcsC Alpha-Beta-Loop (ABL) EPB55_RS19955 PF00563 EAL domain EPB55_RS19955 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS19955 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS19960 PF00196 Bacterial regulatory proteins, luxR family EPB55_RS19960 PF00072 Response regulator receiver domain EPB55_RS19965 PF00563 EAL domain EPB55_RS19965 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS19965 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS19970 PF00196 Bacterial regulatory proteins, luxR family EPB55_RS19970 PF00072 Response regulator receiver domain EPB55_RS19980 PF01593 Flavin containing amine oxidoreductase EPB55_RS19990 PF03466 LysR substrate binding domain EPB55_RS19990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS20005 PF08212 Lipocalin-like domain EPB55_RS20055 PF00107 Zinc-binding dehydrogenase EPB55_RS20055 PF08240 Alcohol dehydrogenase GroES-like domain EPB55_RS20060 PF00155 Aminotransferase class I and II EPB55_RS20065 PF00657 GDSL-like Lipase/Acylhydrolase EPB55_RS20070 PF00082 Subtilase family EPB55_RS20070 PF05922 Peptidase inhibitor I9 EPB55_RS20080 PF07690 Major Facilitator Superfamily EPB55_RS20085 PF03466 LysR substrate binding domain EPB55_RS20085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS20090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EPB55_RS20105 PF00199 Catalase EPB55_RS20105 PF06628 Catalase-related immune-responsive EPB55_RS20115 PF00080 Copper/zinc superoxide dismutase (SODC) EPB55_RS20135 PF01966 HD domain EPB55_RS20145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS20145 PF03466 LysR substrate binding domain EPB55_RS20150 PF01906 Putative heavy-metal-binding EPB55_RS20160 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS20160 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS20160 PF00563 EAL domain EPB55_RS20170 PF07715 TonB-dependent Receptor Plug Domain EPB55_RS20170 PF00593 TonB dependent receptor EPB55_RS20175 PF13416 Bacterial extracellular solute-binding protein EPB55_RS20180 PF00056 lactate/malate dehydrogenase, NAD binding domain EPB55_RS20180 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EPB55_RS20195 PF07690 Major Facilitator Superfamily EPB55_RS20205 PF10928 Protein of unknown function (DUF2810) EPB55_RS20265 PF04013 Putative SAM-dependent RNA methyltransferase EPB55_RS20270 PF08543 Phosphomethylpyrimidine kinase EPB55_RS20275 PF01569 PAP2 superfamily EPB55_RS20300 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EPB55_RS20310 PF01323 DSBA-like thioredoxin domain EPB55_RS20330 PF03466 LysR substrate binding domain EPB55_RS20330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS20335 PF00106 short chain dehydrogenase EPB55_RS20340 PF03466 LysR substrate binding domain EPB55_RS20340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS20350 PF00072 Response regulator receiver domain EPB55_RS20350 PF00486 Transcriptional regulatory protein, C terminal EPB55_RS20355 PF00672 HAMP domain EPB55_RS20355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS20355 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS20360 PF01219 Prokaryotic diacylglycerol kinase EPB55_RS20365 PF08019 Phosphoethanolamine transferase EptA/EptB EPB55_RS20365 PF00884 Sulfatase EPB55_RS20370 PF00884 Sulfatase EPB55_RS20380 PF16657 Maltogenic Amylase, C-terminal domain EPB55_RS20380 PF00128 Alpha amylase, catalytic domain EPB55_RS20380 PF02903 Alpha amylase, N-terminal ig-like domain EPB55_RS20385 PF04231 Endonuclease I EPB55_RS20400 PF08448 PAS fold EPB55_RS20400 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS20410 PF00392 Bacterial regulatory proteins, gntR family EPB55_RS20410 PF00155 Aminotransferase class I and II EPB55_RS20440 PF02668 Taurine catabolism dioxygenase TauD, TfdA family EPB55_RS20445 PF05958 tRNA (Uracil-5-)-methyltransferase EPB55_RS20450 PF00881 Nitroreductase family EPB55_RS20460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS20460 PF03466 LysR substrate binding domain EPB55_RS20490 PF00375 Sodium:dicarboxylate symporter family EPB55_RS20495 PF03466 LysR substrate binding domain EPB55_RS20495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS20500 PF00764 Arginosuccinate synthase EPB55_RS20515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS20515 PF03466 LysR substrate binding domain EPB55_RS20530 PF01048 Phosphorylase superfamily EPB55_RS20535 PF04973 Nicotinamide mononucleotide transporter EPB55_RS20560 PF04151 Bacterial pre-peptidase C-terminal domain EPB55_RS20560 PF08453 Peptidase family M9 N-terminal EPB55_RS20560 PF01752 Collagenase EPB55_RS20565 PF03466 LysR substrate binding domain EPB55_RS20565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS20570 PF01048 Phosphorylase superfamily EPB55_RS20575 PF01238 Phosphomannose isomerase type I EPB55_RS20580 PF00155 Aminotransferase class I and II EPB55_RS20585 PF02378 Phosphotransferase system, EIIC EPB55_RS20585 PF00367 phosphotransferase system, EIIB EPB55_RS20590 PF00356 Bacterial regulatory proteins, lacI family EPB55_RS20590 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EPB55_RS20600 PF12838 4Fe-4S dicluster domain EPB55_RS20600 PF01568 Molydopterin dinucleotide binding domain EPB55_RS20600 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EPB55_RS20600 PF00384 Molybdopterin oxidoreductase EPB55_RS20600 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EPB55_RS20645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPB55_RS20655 PF12833 Helix-turn-helix domain EPB55_RS20660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EPB55_RS20660 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPB55_RS20660 PF02378 Phosphotransferase system, EIIC EPB55_RS20665 PF01238 Phosphomannose isomerase type I EPB55_RS20685 PF18113 Rubredoxin binding C-terminal domain EPB55_RS20685 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPB55_RS20690 PF00301 Rubredoxin EPB55_RS20690 PF00753 Metallo-beta-lactamase superfamily EPB55_RS20690 PF00258 Flavodoxin EPB55_RS20695 PF01590 GAF domain EPB55_RS20695 PF00158 Sigma-54 interaction domain EPB55_RS20720 PF12833 Helix-turn-helix domain EPB55_RS20725 PF00593 TonB dependent receptor EPB55_RS20725 PF07715 TonB-dependent Receptor Plug Domain EPB55_RS20735 PF00037 4Fe-4S binding domain EPB55_RS20735 PF11953 Domain of unknown function (DUF3470) EPB55_RS20740 PF00588 SpoU rRNA Methylase family EPB55_RS20740 PF08032 RNA 2'-O ribose methyltransferase substrate binding EPB55_RS20750 PF16874 Glycosyl hydrolase family 36 C-terminal domain EPB55_RS20750 PF16875 Glycosyl hydrolase family 36 N-terminal domain EPB55_RS20755 PF02837 Glycosyl hydrolases family 2, sugar binding domain EPB55_RS20755 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EPB55_RS20755 PF00703 Glycosyl hydrolases family 2 EPB55_RS20755 PF16353 Domain of unknown function(DUF4981) EPB55_RS20755 PF02929 Beta galactosidase small chain EPB55_RS20760 PF13407 Periplasmic binding protein domain EPB55_RS20765 PF00005 ABC transporter EPB55_RS20770 PF02653 Branched-chain amino acid transport system / permease component EPB55_RS20775 PF00356 Bacterial regulatory proteins, lacI family EPB55_RS20790 PF00873 AcrB/AcrD/AcrF family EPB55_RS20795 PF00563 EAL domain EPB55_RS20795 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS20795 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS20800 PF00849 RNA pseudouridylate synthase EPB55_RS20835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EPB55_RS20835 PF00529 HlyD membrane-fusion protein of T1SS EPB55_RS20845 PF01554 MatE EPB55_RS20850 PF01915 Glycosyl hydrolase family 3 C-terminal domain EPB55_RS20850 PF14310 Fibronectin type III-like domain EPB55_RS20850 PF00933 Glycosyl hydrolase family 3 N terminal domain EPB55_RS20855 PF12833 Helix-turn-helix domain EPB55_RS20860 PF02264 LamB porin EPB55_RS20865 PF00722 Glycosyl hydrolases family 16 EPB55_RS20875 PF00356 Bacterial regulatory proteins, lacI family EPB55_RS20885 PF00005 ABC transporter EPB55_RS20885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB55_RS20890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB55_RS20890 PF00005 ABC transporter EPB55_RS20895 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS20900 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS20905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPB55_RS20915 PF00356 Bacterial regulatory proteins, lacI family EPB55_RS20920 PF08402 TOBE domain EPB55_RS20920 PF00005 ABC transporter EPB55_RS20925 PF00232 Glycosyl hydrolase family 1 EPB55_RS20930 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS20935 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS20945 PF00356 Bacterial regulatory proteins, lacI family EPB55_RS20950 PF02264 LamB porin EPB55_RS20960 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS20970 PF00501 AMP-binding enzyme EPB55_RS20985 PF00486 Transcriptional regulatory protein, C terminal EPB55_RS20985 PF00072 Response regulator receiver domain EPB55_RS20990 PF08521 Two-component sensor kinase N-terminal EPB55_RS20990 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS20990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS21000 PF09335 SNARE associated Golgi protein EPB55_RS21005 PF01699 Sodium/calcium exchanger protein EPB55_RS21015 PF03466 LysR substrate binding domain EPB55_RS21015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS21020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS21020 PF03466 LysR substrate binding domain EPB55_RS21030 PF05193 Peptidase M16 inactive domain EPB55_RS21030 PF00675 Insulinase (Peptidase family M16) EPB55_RS21035 PF02690 Na+/Pi-cotransporter EPB55_RS21040 PF01966 HD domain EPB55_RS21045 PF02798 Glutathione S-transferase, N-terminal domain EPB55_RS21050 PF00171 Aldehyde dehydrogenase family EPB55_RS21065 PF02743 Cache domain EPB55_RS21065 PF00672 HAMP domain EPB55_RS21065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS21090 PF01470 Pyroglutamyl peptidase EPB55_RS21100 PF01037 Lrp/AsnC ligand binding domain EPB55_RS21105 PF01810 LysE type translocator EPB55_RS21110 PF04055 Radical SAM superfamily EPB55_RS21110 PF00919 Uncharacterized protein family UPF0004 EPB55_RS21110 PF18693 TRAM domain EPB55_RS21115 PF16591 Helical bimodular sensor domain EPB55_RS21115 PF00672 HAMP domain EPB55_RS21115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS21120 PF00128 Alpha amylase, catalytic domain EPB55_RS21120 PF02806 Alpha amylase, C-terminal all-beta domain EPB55_RS21120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EPB55_RS21125 PF02446 4-alpha-glucanotransferase EPB55_RS21130 PF00343 Carbohydrate phosphorylase EPB55_RS21135 PF00196 Bacterial regulatory proteins, luxR family EPB55_RS21135 PF17874 MalT-like TPR region EPB55_RS21150 PF02630 SCO1/SenC EPB55_RS21155 PF04314 Copper chaperone PCu(A)C EPB55_RS21160 PF03193 RsgA GTPase EPB55_RS21165 PF00375 Sodium:dicarboxylate symporter family EPB55_RS21170 PF08543 Phosphomethylpyrimidine kinase EPB55_RS21175 PF13520 Amino acid permease EPB55_RS21180 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain EPB55_RS21180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EPB55_RS21180 PF01276 Orn/Lys/Arg decarboxylase, major domain EPB55_RS21195 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EPB55_RS21195 PF18494 Pullulanase Ins domain EPB55_RS21195 PF17967 Pullulanase N2 domain EPB55_RS21195 PF11852 Domain of unknown function (DUF3372) EPB55_RS21195 PF03714 Bacterial pullanase-associated domain EPB55_RS21205 PF16657 Maltogenic Amylase, C-terminal domain EPB55_RS21205 PF02903 Alpha amylase, N-terminal ig-like domain EPB55_RS21205 PF00128 Alpha amylase, catalytic domain EPB55_RS21210 PF01547 Bacterial extracellular solute-binding protein EPB55_RS21220 PF07148 Maltose operon periplasmic protein precursor (MalM) EPB55_RS21225 PF02264 LamB porin EPB55_RS21230 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EPB55_RS21230 PF00128 Alpha amylase, catalytic domain EPB55_RS21235 PF17158 Membrane-associated sensor, integral membrane domain EPB55_RS21235 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS21240 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS21240 PF00563 EAL domain EPB55_RS21250 PF02678 Pirin EPB55_RS21250 PF05726 Pirin C-terminal cupin domain EPB55_RS21255 PF06865 Pyrimidine/purine nucleoside phosphorylase EPB55_RS21265 PF08329 Chitinase A, N-terminal domain EPB55_RS21265 PF00704 Glycosyl hydrolases family 18 EPB55_RS21275 PF00440 Bacterial regulatory proteins, tetR family EPB55_RS21275 PF08361 MAATS-type transcriptional repressor, C-terminal region EPB55_RS21285 PF03600 Citrate transporter EPB55_RS21300 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EPB55_RS21305 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EPB55_RS21305 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EPB55_RS21310 PF00730 HhH-GPD superfamily base excision DNA repair protein EPB55_RS21310 PF06029 AlkA N-terminal domain EPB55_RS21320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS21320 PF03466 LysR substrate binding domain EPB55_RS21330 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EPB55_RS21330 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EPB55_RS21345 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EPB55_RS21355 PF03616 Sodium/glutamate symporter EPB55_RS21360 PF03616 Sodium/glutamate symporter EPB55_RS21370 PF17200 Single Cache domain 2 EPB55_RS21370 PF00672 HAMP domain EPB55_RS21370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS21375 PF04397 LytTr DNA-binding domain EPB55_RS21375 PF00072 Response regulator receiver domain EPB55_RS21380 PF06580 Histidine kinase EPB55_RS21380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS21380 PF07694 5TMR of 5TMR-LYT EPB55_RS21395 PF12704 MacB-like periplasmic core domain EPB55_RS21395 PF02687 FtsX-like permease family EPB55_RS21400 PF00005 ABC transporter EPB55_RS21410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS21410 PF03466 LysR substrate binding domain EPB55_RS21420 PF01709 Transcriptional regulator EPB55_RS21430 PF00072 Response regulator receiver domain EPB55_RS21430 PF17149 Periplasmic sensor domain found in signal transduction proteins EPB55_RS21430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS21430 PF00672 HAMP domain EPB55_RS21430 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS21430 PF01627 Hpt domain EPB55_RS21450 PF00005 ABC transporter EPB55_RS21450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB55_RS21455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB55_RS21455 PF00005 ABC transporter EPB55_RS21470 PF13614 AAA domain EPB55_RS21470 PF18607 ParA helix turn helix domain EPB55_RS21475 PF02195 ParB-like nuclease domain EPB55_RS21475 PF08775 ParB family EPB55_RS21480 PF05127 Helicase EPB55_RS21480 PF13718 GNAT acetyltransferase 2 EPB55_RS21490 PF00072 Response regulator receiver domain EPB55_RS21495 PF09078 CheY binding EPB55_RS21495 PF02895 Signal transducing histidine kinase, homodimeric domain EPB55_RS21495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS21495 PF01627 Hpt domain EPB55_RS21495 PF01584 CheW-like domain EPB55_RS21500 PF01584 CheW-like domain EPB55_RS21505 PF01584 CheW-like domain EPB55_RS21510 PF00672 HAMP domain EPB55_RS21510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS21510 PF02203 Tar ligand binding domain homologue EPB55_RS21515 PF03705 CheR methyltransferase, all-alpha domain EPB55_RS21515 PF01739 CheR methyltransferase, SAM binding domain EPB55_RS21520 PF03975 CheD chemotactic sensory transduction EPB55_RS21525 PF00072 Response regulator receiver domain EPB55_RS21525 PF01339 CheB methylesterase EPB55_RS21530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS21530 PF02203 Tar ligand binding domain homologue EPB55_RS21530 PF00672 HAMP domain EPB55_RS21540 PF00072 Response regulator receiver domain EPB55_RS21540 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS21550 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EPB55_RS21555 PF02463 RecF/RecN/SMC N terminal domain EPB55_RS21575 PF17848 Acetyl-coA carboxylase zinc finger domain EPB55_RS21575 PF01039 Carboxyl transferase domain EPB55_RS21585 PF04151 Bacterial pre-peptidase C-terminal domain EPB55_RS21585 PF01752 Collagenase EPB55_RS21585 PF08453 Peptidase family M9 N-terminal EPB55_RS21590 PF00300 Histidine phosphatase superfamily (branch 1) EPB55_RS21595 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS21595 PF01590 GAF domain EPB55_RS21595 PF00989 PAS fold EPB55_RS21595 PF00563 EAL domain EPB55_RS21605 PF02378 Phosphotransferase system, EIIC EPB55_RS21605 PF00367 phosphotransferase system, EIIB EPB55_RS21610 PF13580 SIS domain EPB55_RS21620 PF01418 Helix-turn-helix domain, rpiR family EPB55_RS21620 PF01380 SIS domain EPB55_RS21625 PF01189 16S rRNA methyltransferase RsmB/F EPB55_RS21625 PF01029 NusB family EPB55_RS21640 PF14602 Hexapeptide repeat of succinyl-transferase EPB55_RS21640 PF12464 Maltose acetyltransferase EPB55_RS21645 PF00166 Chaperonin 10 Kd subunit EPB55_RS21650 PF00118 TCP-1/cpn60 chaperonin family EPB55_RS21665 PF01979 Amidohydrolase family EPB55_RS21670 PF03606 C4-dicarboxylate anaerobic carrier EPB55_RS21680 PF00005 ABC transporter EPB55_RS21680 PF03412 Peptidase C39 family EPB55_RS21680 PF00664 ABC transporter transmembrane region EPB55_RS21695 PF00529 HlyD membrane-fusion protein of T1SS EPB55_RS21700 PF00072 Response regulator receiver domain EPB55_RS21700 PF00158 Sigma-54 interaction domain EPB55_RS21700 PF02954 Bacterial regulatory protein, Fis family EPB55_RS21705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS21705 PF02743 Cache domain EPB55_RS21705 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS21710 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EPB55_RS21710 PF01243 Pyridoxamine 5'-phosphate oxidase EPB55_RS21720 PF12833 Helix-turn-helix domain EPB55_RS21725 PF01619 Proline dehydrogenase EPB55_RS21725 PF14850 DNA-binding domain of Proline dehydrogenase EPB55_RS21725 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EPB55_RS21725 PF00171 Aldehyde dehydrogenase family EPB55_RS21735 PF00474 Sodium:solute symporter family EPB55_RS21745 PF01037 Lrp/AsnC ligand binding domain EPB55_RS21755 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain EPB55_RS21755 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain EPB55_RS21755 PF02278 Polysaccharide lyase family 8, super-sandwich domain EPB55_RS21760 PF16385 Domain of unknown function EPB55_RS21760 PF00884 Sulfatase EPB55_RS21765 PF00884 Sulfatase EPB55_RS21770 PF04055 Radical SAM superfamily EPB55_RS21770 PF13186 Iron-sulfur cluster-binding domain EPB55_RS21775 PF16347 Domain of unknown function (DUF4976) EPB55_RS21785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPB55_RS21790 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS21795 PF12911 N-terminal TM domain of oligopeptide transport permease C EPB55_RS21795 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS21800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB55_RS21800 PF00005 ABC transporter EPB55_RS21805 PF00672 HAMP domain EPB55_RS21805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS21820 PF00916 Sulfate permease family EPB55_RS21820 PF01740 STAS domain EPB55_RS21825 PF16363 GDP-mannose 4,6 dehydratase EPB55_RS21830 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain EPB55_RS21830 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain EPB55_RS21840 PF07470 Glycosyl Hydrolase Family 88 EPB55_RS21845 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain EPB55_RS21845 PF17386 Lacto-N-biose phosphorylase C-terminal domain EPB55_RS21845 PF17385 Lacto-N-biose phosphorylase central domain EPB55_RS21850 PF02278 Polysaccharide lyase family 8, super-sandwich domain EPB55_RS21850 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain EPB55_RS21850 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain EPB55_RS21855 PF00664 ABC transporter transmembrane region EPB55_RS21855 PF00005 ABC transporter EPB55_RS21870 PF01261 Xylose isomerase-like TIM barrel EPB55_RS21875 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EPB55_RS21885 PF00596 Class II Aldolase and Adducin N-terminal domain EPB55_RS21890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EPB55_RS21895 PF03611 PTS system sugar-specific permease component EPB55_RS21900 PF08220 DeoR-like helix-turn-helix domain EPB55_RS21900 PF00455 DeoR C terminal sensor domain EPB55_RS21910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EPB55_RS21920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS21920 PF03466 LysR substrate binding domain EPB55_RS21925 PF10688 Bacterial inner membrane protein EPB55_RS21930 PF01081 KDPG and KHG aldolase EPB55_RS21935 PF00294 pfkB family carbohydrate kinase EPB55_RS21940 PF02614 Glucuronate isomerase EPB55_RS21945 PF08125 Mannitol dehydrogenase C-terminal domain EPB55_RS21945 PF01232 Mannitol dehydrogenase Rossmann domain EPB55_RS21950 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EPB55_RS21955 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EPB55_RS21960 PF03480 Bacterial extracellular solute-binding protein, family 7 EPB55_RS21965 PF07729 FCD domain EPB55_RS21965 PF00392 Bacterial regulatory proteins, gntR family EPB55_RS21970 PF03786 D-mannonate dehydratase (UxuA) EPB55_RS21975 PF00270 DEAD/DEAH box helicase EPB55_RS21975 PF00271 Helicase conserved C-terminal domain EPB55_RS21990 PF00857 Isochorismatase family EPB55_RS21995 PF02311 AraC-like ligand binding domain EPB55_RS21995 PF12833 Helix-turn-helix domain EPB55_RS22000 PF00701 Dihydrodipicolinate synthetase family EPB55_RS22005 PF00920 Dehydratase family EPB55_RS22010 PF13378 Enolase C-terminal domain-like EPB55_RS22010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EPB55_RS22015 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EPB55_RS22015 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EPB55_RS22025 PF03480 Bacterial extracellular solute-binding protein, family 7 EPB55_RS22030 PF01081 KDPG and KHG aldolase EPB55_RS22035 PF05035 2-keto-3-deoxy-galactonokinase EPB55_RS22040 PF07729 FCD domain EPB55_RS22040 PF00392 Bacterial regulatory proteins, gntR family EPB55_RS22045 PF03473 MOSC domain EPB55_RS22045 PF03475 3-alpha domain EPB55_RS22065 PF11975 Family 4 glycosyl hydrolase C-terminal domain EPB55_RS22065 PF02056 Family 4 glycosyl hydrolase EPB55_RS22070 PF03466 LysR substrate binding domain EPB55_RS22070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS22085 PF12852 Cupin EPB55_RS22085 PF12833 Helix-turn-helix domain EPB55_RS22090 PF00462 Glutaredoxin EPB55_RS22105 PF00672 HAMP domain EPB55_RS22105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS22125 PF01625 Peptide methionine sulfoxide reductase EPB55_RS22130 PF01641 SelR domain EPB55_RS22155 PF14864 Alkyl sulfatase C-terminal EPB55_RS22155 PF14863 Alkyl sulfatase dimerisation EPB55_RS22155 PF00753 Metallo-beta-lactamase superfamily EPB55_RS22160 PF03466 LysR substrate binding domain EPB55_RS22160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS22165 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EPB55_RS22165 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EPB55_RS22170 PF12833 Helix-turn-helix domain EPB55_RS22175 PF00892 EamA-like transporter family EPB55_RS22180 PF00455 DeoR C terminal sensor domain EPB55_RS22180 PF08220 DeoR-like helix-turn-helix domain EPB55_RS22185 PF08220 DeoR-like helix-turn-helix domain EPB55_RS22185 PF00455 DeoR C terminal sensor domain EPB55_RS22190 PF08013 Tagatose 6 phosphate kinase EPB55_RS22195 PF01380 SIS domain EPB55_RS22200 PF03830 PTS system sorbose subfamily IIB component EPB55_RS22205 PF03609 PTS system sorbose-specific iic component EPB55_RS22210 PF03613 PTS system mannose/fructose/sorbose family IID component EPB55_RS22215 PF03610 PTS system fructose IIA component EPB55_RS22220 PF01979 Amidohydrolase family EPB55_RS22225 PF01116 Fructose-bisphosphate aldolase class-II EPB55_RS22230 PF12848 ABC transporter EPB55_RS22230 PF00005 ABC transporter EPB55_RS22235 PF00593 TonB dependent receptor EPB55_RS22235 PF07715 TonB-dependent Receptor Plug Domain EPB55_RS22245 PF01032 FecCD transport family EPB55_RS22250 PF01497 Periplasmic binding protein EPB55_RS22255 PF00005 ABC transporter EPB55_RS22280 PF12704 MacB-like periplasmic core domain EPB55_RS22280 PF02687 FtsX-like permease family EPB55_RS22280 PF00005 ABC transporter EPB55_RS22285 PF00005 ABC transporter EPB55_RS22285 PF02687 FtsX-like permease family EPB55_RS22285 PF12704 MacB-like periplasmic core domain EPB55_RS22290 PF12704 MacB-like periplasmic core domain EPB55_RS22290 PF02687 FtsX-like permease family EPB55_RS22290 PF00005 ABC transporter EPB55_RS22295 PF07733 Bacterial DNA polymerase III alpha NTPase domain EPB55_RS22295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EPB55_RS22295 PF14579 Helix-hairpin-helix motif EPB55_RS22295 PF11490 DNA polymerase III polC-type N-terminus II EPB55_RS22295 PF02811 PHP domain EPB55_RS22295 PF00929 Exonuclease EPB55_RS22305 PF05785 Rho-activating domain of cytotoxic necrotizing factor EPB55_RS22305 PF18807 Tripartite Tc toxins repeat EPB55_RS22320 PF18807 Tripartite Tc toxins repeat EPB55_RS22320 PF14431 YwqJ-like deaminase EPB55_RS22345 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS22345 PF17158 Membrane-associated sensor, integral membrane domain EPB55_RS22360 PF08267 Cobalamin-independent synthase, N-terminal domain EPB55_RS22360 PF01717 Cobalamin-independent synthase, Catalytic domain EPB55_RS22370 PF00529 HlyD membrane-fusion protein of T1SS EPB55_RS22370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EPB55_RS22380 PF00672 HAMP domain EPB55_RS22380 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS22380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS22385 PF00072 Response regulator receiver domain EPB55_RS22385 PF00486 Transcriptional regulatory protein, C terminal EPB55_RS22395 PF14864 Alkyl sulfatase C-terminal EPB55_RS22395 PF14863 Alkyl sulfatase dimerisation EPB55_RS22395 PF00753 Metallo-beta-lactamase superfamily EPB55_RS22405 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS22405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS22405 PF02743 Cache domain EPB55_RS22410 PF00158 Sigma-54 interaction domain EPB55_RS22410 PF02954 Bacterial regulatory protein, Fis family EPB55_RS22410 PF00072 Response regulator receiver domain EPB55_RS22425 PF01266 FAD dependent oxidoreductase EPB55_RS22435 PF00072 Response regulator receiver domain EPB55_RS22440 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS22440 PF00072 Response regulator receiver domain EPB55_RS22440 PF00672 HAMP domain EPB55_RS22440 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EPB55_RS22440 PF01627 Hpt domain EPB55_RS22440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS22445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS22445 PF00672 HAMP domain EPB55_RS22455 PF13599 Pentapeptide repeats (9 copies) EPB55_RS22465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EPB55_RS22465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EPB55_RS22470 PF01447 Thermolysin metallopeptidase, catalytic domain EPB55_RS22470 PF03413 Peptidase propeptide and YPEB domain EPB55_RS22470 PF07504 Fungalysin/Thermolysin Propeptide Motif EPB55_RS22470 PF02868 Thermolysin metallopeptidase, alpha-helical domain EPB55_RS22470 PF04151 Bacterial pre-peptidase C-terminal domain EPB55_RS22490 PF00561 alpha/beta hydrolase fold EPB55_RS22500 PF00271 Helicase conserved C-terminal domain EPB55_RS22500 PF00270 DEAD/DEAH box helicase EPB55_RS22505 PF00561 alpha/beta hydrolase fold EPB55_RS22510 PF00881 Nitroreductase family EPB55_RS22520 PF03466 LysR substrate binding domain EPB55_RS22520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS22530 PF00970 Oxidoreductase FAD-binding domain EPB55_RS22530 PF00175 Oxidoreductase NAD-binding domain EPB55_RS22535 PF00892 EamA-like transporter family EPB55_RS22540 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) EPB55_RS22560 PF07690 Major Facilitator Superfamily EPB55_RS22565 PF02311 AraC-like ligand binding domain EPB55_RS22565 PF12833 Helix-turn-helix domain EPB55_RS22575 PF06942 GlpM protein EPB55_RS22580 PF00034 Cytochrome c EPB55_RS22580 PF03150 Di-haem cytochrome c peroxidase EPB55_RS22590 PF02001 Protein of unknown function DUF134 EPB55_RS22605 PF14492 Elongation Factor G, domain II EPB55_RS22605 PF00679 Elongation factor G C-terminus EPB55_RS22605 PF03764 Elongation factor G, domain IV EPB55_RS22605 PF00009 Elongation factor Tu GTP binding domain EPB55_RS22605 PF03144 Elongation factor Tu domain 2 EPB55_RS22610 PF13006 Insertion element 4 transposase N-terminal EPB55_RS22610 PF01609 Transposase DDE domain EPB55_RS22615 PF00583 Acetyltransferase (GNAT) family EPB55_RS22620 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS22620 PF17151 Periplasmic sensor domain EPB55_RS22635 PF00376 MerR family regulatory protein EPB55_RS22635 PF09278 MerR, DNA binding EPB55_RS22640 PF04244 Deoxyribodipyrimidine photo-lyase-related protein EPB55_RS22645 PF12833 Helix-turn-helix domain EPB55_RS22650 PF01161 Phosphatidylethanolamine-binding protein EPB55_RS22655 PF00293 NUDIX domain EPB55_RS22660 PF00672 HAMP domain EPB55_RS22660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPB55_RS22660 PF00512 His Kinase A (phospho-acceptor) domain EPB55_RS22660 PF01627 Hpt domain EPB55_RS22660 PF00072 Response regulator receiver domain EPB55_RS22660 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EPB55_RS22670 PF13533 Biotin-lipoyl like EPB55_RS22675 PF00873 AcrB/AcrD/AcrF family EPB55_RS22685 PF00924 Mechanosensitive ion channel EPB55_RS22705 PF00795 Carbon-nitrogen hydrolase EPB55_RS22705 PF00583 Acetyltransferase (GNAT) family EPB55_RS22720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS22720 PF00672 HAMP domain EPB55_RS22720 PF12729 Four helix bundle sensory module for signal transduction EPB55_RS22740 PF01614 Bacterial transcriptional regulator EPB55_RS22740 PF09339 IclR helix-turn-helix domain EPB55_RS22750 PF10688 Bacterial inner membrane protein EPB55_RS22755 PF07883 Cupin domain EPB55_RS22770 PF00892 EamA-like transporter family EPB55_RS22775 PF00294 pfkB family carbohydrate kinase EPB55_RS22780 PF01081 KDPG and KHG aldolase EPB55_RS22805 PF13229 Right handed beta helix region EPB55_RS22810 PF00474 Sodium:solute symporter family EPB55_RS22815 PF14583 Oligogalacturonate lyase EPB55_RS22820 PF00128 Alpha amylase, catalytic domain EPB55_RS22830 PF07670 Nucleoside recognition EPB55_RS22835 PF07670 Nucleoside recognition EPB55_RS22840 PF07687 Peptidase dimerisation domain EPB55_RS22840 PF01546 Peptidase family M20/M25/M40 EPB55_RS22855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS22855 PF03466 LysR substrate binding domain EPB55_RS22875 PF01022 Bacterial regulatory protein, arsR family EPB55_RS22880 PF01758 Sodium Bile acid symporter family EPB55_RS22900 PF00884 Sulfatase EPB55_RS22900 PF08019 Phosphoethanolamine transferase EptA/EptB EPB55_RS22920 PF00529 HlyD membrane-fusion protein of T1SS EPB55_RS22920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EPB55_RS22930 PF00144 Beta-lactamase EPB55_RS22935 PF00360 Phytochrome region EPB55_RS22935 PF01590 GAF domain EPB55_RS22935 PF00563 EAL domain EPB55_RS22935 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS22950 PF08543 Phosphomethylpyrimidine kinase EPB55_RS22955 PF03466 LysR substrate binding domain EPB55_RS22955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS22965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS22965 PF03466 LysR substrate binding domain EPB55_RS22975 PF00753 Metallo-beta-lactamase superfamily EPB55_RS22975 PF14864 Alkyl sulfatase C-terminal EPB55_RS22975 PF14863 Alkyl sulfatase dimerisation EPB55_RS22985 PF13533 Biotin-lipoyl like EPB55_RS22995 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EPB55_RS23000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EPB55_RS23000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EPB55_RS23005 PF00579 tRNA synthetases class I (W and Y) EPB55_RS23005 PF01479 S4 domain EPB55_RS23010 PF00072 Response regulator receiver domain EPB55_RS23010 PF00196 Bacterial regulatory proteins, luxR family EPB55_RS23020 PF03466 LysR substrate binding domain EPB55_RS23020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS23025 PF14497 Glutathione S-transferase, C-terminal domain EPB55_RS23025 PF02798 Glutathione S-transferase, N-terminal domain EPB55_RS23030 PF13407 Periplasmic binding protein domain EPB55_RS23035 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS23035 PF03707 Bacterial signalling protein N terminal repeat EPB55_RS23035 PF00563 EAL domain EPB55_RS23040 PF00158 Sigma-54 interaction domain EPB55_RS23040 PF01590 GAF domain EPB55_RS23040 PF02954 Bacterial regulatory protein, Fis family EPB55_RS23045 PF00171 Aldehyde dehydrogenase family EPB55_RS23055 PF01595 Cyclin M transmembrane N-terminal domain EPB55_RS23055 PF00571 CBS domain EPB55_RS23055 PF03471 Transporter associated domain EPB55_RS23060 PF12561 ToxR activated gene A lipoprotein domain EPB55_RS23060 PF00041 Fibronectin type III domain EPB55_RS23065 PF01327 Polypeptide deformylase EPB55_RS23070 PF03611 PTS system sugar-specific permease component EPB55_RS23080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EPB55_RS23085 PF00356 Bacterial regulatory proteins, lacI family EPB55_RS23090 PF00111 2Fe-2S iron-sulfur cluster binding domain EPB55_RS23090 PF00175 Oxidoreductase NAD-binding domain EPB55_RS23090 PF00970 Oxidoreductase FAD-binding domain EPB55_RS23100 PF00005 ABC transporter EPB55_RS23100 PF16326 ABC transporter C-terminal domain EPB55_RS23100 PF12848 ABC transporter EPB55_RS23105 PF03222 Tryptophan/tyrosine permease family EPB55_RS23110 PF01212 Beta-eliminating lyase EPB55_RS23125 PF00873 AcrB/AcrD/AcrF family EPB55_RS23130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EPB55_RS23145 PF00753 Metallo-beta-lactamase superfamily EPB55_RS23155 PF08443 RimK-like ATP-grasp domain EPB55_RS23155 PF18030 RimK PreATP-grasp domain EPB55_RS23160 PF13193 AMP-binding enzyme C-terminal domain EPB55_RS23160 PF00668 Condensation domain EPB55_RS23160 PF00550 Phosphopantetheine attachment site EPB55_RS23160 PF00975 Thioesterase domain EPB55_RS23160 PF00501 AMP-binding enzyme EPB55_RS23165 PF07715 TonB-dependent Receptor Plug Domain EPB55_RS23170 PF01497 Periplasmic binding protein EPB55_RS23180 PF13193 AMP-binding enzyme C-terminal domain EPB55_RS23180 PF00501 AMP-binding enzyme EPB55_RS23190 PF00857 Isochorismatase family EPB55_RS23190 PF00550 Phosphopantetheine attachment site EPB55_RS23195 PF04954 Siderophore-interacting protein EPB55_RS23195 PF08021 Siderophore-interacting FAD-binding domain EPB55_RS23200 PF00501 AMP-binding enzyme EPB55_RS23200 PF13193 AMP-binding enzyme C-terminal domain EPB55_RS23205 PF00425 chorismate binding enzyme EPB55_RS23215 PF00793 DAHP synthetase I family EPB55_RS23225 PF13193 AMP-binding enzyme C-terminal domain EPB55_RS23225 PF00668 Condensation domain EPB55_RS23225 PF00501 AMP-binding enzyme EPB55_RS23225 PF00550 Phosphopantetheine attachment site EPB55_RS23225 PF07993 Male sterility protein EPB55_RS23230 PF17837 4'-phosphopantetheinyl transferase N-terminal domain EPB55_RS23230 PF01648 4'-phosphopantetheinyl transferase superfamily EPB55_RS23245 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPB55_RS23250 PF00672 HAMP domain EPB55_RS23250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EPB55_RS23250 PF12729 Four helix bundle sensory module for signal transduction EPB55_RS23260 PF17996 Carbohydrate esterase 2 N-terminal EPB55_RS23260 PF13472 GDSL-like Lipase/Acylhydrolase family EPB55_RS23265 PF00990 Diguanylate cyclase, GGDEF domain EPB55_RS23265 PF08448 PAS fold EPB55_RS23265 PF00563 EAL domain EPB55_RS23280 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS23285 PF00528 Binding-protein-dependent transport system inner membrane component EPB55_RS23290 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPB55_RS23295 PF00005 ABC transporter EPB55_RS23300 PF17185 NlpE C-terminal OB domain EPB55_RS23300 PF04170 NlpE N-terminal domain EPB55_RS23315 PF02378 Phosphotransferase system, EIIC EPB55_RS23355 PF07690 Major Facilitator Superfamily EPB55_RS23375 PF02589 LUD domain EPB55_RS23380 PF11870 Domain of unknown function (DUF3390) EPB55_RS23380 PF02589 LUD domain EPB55_RS23380 PF13183 4Fe-4S dicluster domain EPB55_RS23385 PF02754 Cysteine-rich domain EPB55_RS23390 PF02652 L-lactate permease EPB55_RS23395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPB55_RS23395 PF03466 LysR substrate binding domain EPB55_RS23400 PF00326 Prolyl oligopeptidase family EPB55_RS23400 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EPB55_RS23405 PF00005 ABC transporter EPB55_RS23405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPB55_RS23415 PF05362 Lon protease (S16) C-terminal proteolytic domain EPB55_RS23415 PF13654 AAA domain EPB55_RS23420 PF07969 Amidohydrolase family EPB55_RS23425 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EPB55_RS23430 PF12833 Helix-turn-helix domain EPB55_RS23435 PF01769 Divalent cation transporter EPB55_RS23435 PF03448 MgtE intracellular N domain EPB55_RS23435 PF00571 CBS domain EPB55_RS23460 PF00486 Transcriptional regulatory protein, C terminal EPB55_RS23460 PF00072 Response regulator receiver domain