VV93_RS00010 SM00480 DNA polymerase III beta subunit VV93_RS00020 SM00387 Histidine kinase-like ATPases VV93_RS00020 SM00433 TopoisomeraseII VV93_RS00030 SM00052 Putative diguanylate phosphodiesterase VV93_RS00030 SM00267 diguanylate cyclase VV93_RS00030 SM01079 VV93_RS00030 VV93_RS00080 SM00829 Enoylreductase VV93_RS00235 SM00382 ATPases associated with a variety of cellular activities VV93_RS00285 SM00220 Serine/Threonine protein kinases, catalytic domain VV93_RS00295 SM00448 cheY-homologous receiver domain VV93_RS00300 SM00354 helix_turn _helix lactose operon repressor VV93_RS00355 SM00344 helix_turn_helix ASNC type VV93_RS00360 SM00052 Putative diguanylate phosphodiesterase VV93_RS00360 SM00091 PAS domain VV93_RS00360 SM00267 diguanylate cyclase VV93_RS00400 SM00028 Tetratricopeptide repeats VV93_RS00425 SM01219 VV93_RS00425 VV93_RS00460 SM00052 Putative diguanylate phosphodiesterase VV93_RS00460 SM00267 diguanylate cyclase VV93_RS00460 SM00897 FIST N domain VV93_RS00460 SM01204 VV93_RS00460 VV93_RS00465 SM01144 VV93_RS00465 VV93_RS00495 SM00052 Putative diguanylate phosphodiesterase VV93_RS00500 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VV93_RS00505 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV93_RS00510 SM00404 Protein tyrosine phosphatase, catalytic domain motif VV93_RS00560 SM00382 ATPases associated with a variety of cellular activities VV93_RS00560 SM00962 SRP54-type protein, GTPase domain VV93_RS00560 SM00963 SRP54-type protein, helical bundle domain VV93_RS00565 SM00382 ATPases associated with a variety of cellular activities VV93_RS00580 SM00450 Rhodanese Homology Domain VV93_RS00605 SM00563 Phosphate acyltransferases VV93_RS00665 SM00422 helix_turn_helix, mercury resistance VV93_RS00705 SM00387 Histidine kinase-like ATPases VV93_RS00705 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS00705 SM00448 cheY-homologous receiver domain VV93_RS00710 SM00530 Helix-turn-helix XRE-family like proteins VV93_RS00765 SM00849 Metallo-beta-lactamase superfamily VV93_RS00795 SM00635 Bacterial Ig-like domain 2 VV93_RS00815 SM00974 VV93_RS00815 VV93_RS00845 SM00360 RNA recognition motif VV93_RS00935 SM01004 Delta-aminolevulinic acid dehydratase VV93_RS00940 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VV93_RS00940 SM00474 3'-5' exonuclease VV93_RS00940 SM00475 5'-3' exonuclease VV93_RS00940 SM00482 DNA polymerase A domain VV93_RS00970 SM00729 Elongator protein 3, MiaB family, Radical SAM VV93_RS00975 SM00052 Putative diguanylate phosphodiesterase VV93_RS00975 SM00267 diguanylate cyclase VV93_RS00975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS00980 SM00382 ATPases associated with a variety of cellular activities VV93_RS00980 SM00448 cheY-homologous receiver domain VV93_RS00985 SM00091 PAS domain VV93_RS00985 SM00387 Histidine kinase-like ATPases VV93_RS00985 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS00995 SM01230 VV93_RS00995 VV93_RS01045 SM00363 S4 RNA-binding domain VV93_RS01060 SM00382 ATPases associated with a variety of cellular activities VV93_RS01140 SM00316 Ribosomal protein S1-like RNA-binding domain VV93_RS01140 SM00732 Likely ribonuclease with RNase H fold. VV93_RS01150 SM00448 cheY-homologous receiver domain VV93_RS01150 SM00862 Transcriptional regulatory protein, C terminal VV93_RS01155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS01155 SM00387 Histidine kinase-like ATPases VV93_RS01155 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS01165 SM00487 DEAD-like helicases superfamily VV93_RS01165 SM00490 helicase superfamily c-terminal domain VV93_RS01175 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_RS01175 SM00954 Region found in RelA / SpoT proteins VV93_RS01180 SM01409 VV93_RS01180 VV93_RS01185 SM00072 Guanylate kinase homologues. VV93_RS01190 SM00028 Tetratricopeptide repeats VV93_RS01240 SM00382 ATPases associated with a variety of cellular activities VV93_RS01245 SM00382 ATPases associated with a variety of cellular activities VV93_RS01450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS01450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS01450 SM01049 VV93_RS01450 VV93_RS01475 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain VV93_RS01475 SM01232 VV93_RS01475 VV93_RS01590 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_RS01680 SM00226 Low molecular weight phosphatase family VV93_RS01690 SM00984 UDP binding domain VV93_RS01765 SM00984 UDP binding domain VV93_RS01785 SM00849 Metallo-beta-lactamase superfamily VV93_RS01785 SM01027 Beta-Casp domain VV93_RS01790 SM01276 VV93_RS01790 VV93_RS01795 SM01403 VV93_RS01795 VV93_RS01815 SM01382 VV93_RS01815 VV93_RS01815 SM01383 VV93_RS01815 VV93_RS01830 SM00322 K homology RNA-binding domain VV93_RS01850 SM01374 VV93_RS01850 VV93_RS01855 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VV93_RS01920 SM00363 S4 RNA-binding domain VV93_RS01920 SM01390 VV93_RS01920 VV93_RS01925 SM00662 RNA polymerases D VV93_RS02010 SM00382 ATPases associated with a variety of cellular activities VV93_RS02090 SM00382 ATPases associated with a variety of cellular activities VV93_RS02120 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_RS02120 SM00924 MgtE intracellular N domain VV93_RS02150 SM00382 ATPases associated with a variety of cellular activities VV93_RS02170 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_RS02180 SM00382 ATPases associated with a variety of cellular activities VV93_RS02215 SM00563 Phosphate acyltransferases VV93_RS02290 SM00650 Ribosomal RNA adenine dimethylases VV93_RS02310 SM00271 DnaJ molecular chaperone homology domain VV93_RS02330 SM01329 VV93_RS02330 VV93_RS02335 SM00917 LeuA allosteric (dimerisation) domain VV93_RS02345 SM00014 Acid phosphatase homologues VV93_RS02375 SM00091 PAS domain VV93_RS02375 SM00267 diguanylate cyclase VV93_RS02385 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV93_RS02385 SM00895 VV93_RS02385 VV93_RS02395 SM00420 helix_turn_helix, Deoxyribose operon repressor VV93_RS02395 SM01134 VV93_RS02395 VV93_RS02435 SM00563 Phosphate acyltransferases VV93_RS02575 SM00400 zinc finger VV93_RS02575 SM00493 VV93_RS02575 VV93_RS02575 SM00766 DNA primase DnaG DnaB-binding VV93_RS02600 SM01207 VV93_RS02600 VV93_RS02605 SM00905 Dihydroneopterin aldolase VV93_RS02625 SM00382 ATPases associated with a variety of cellular activities VV93_RS02630 SM00287 Bacterial SH3 domain homologues VV93_RS02645 SM00880 VV93_RS02645 VV93_RS02645 SM01118 VV93_RS02645 VV93_RS02655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS02695 SM00387 Histidine kinase-like ATPases VV93_RS02695 SM00433 TopoisomeraseII VV93_RS02700 SM00434 DNA Topoisomerase IV VV93_RS02705 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VV93_RS02710 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VV93_RS02760 SM00749 bacterial OsmY and nodulation domain VV93_RS02840 SM00842 Cell division protein FtsA VV93_RS02845 SM00864 Tubulin/FtsZ family, GTPase domain VV93_RS02845 SM00865 Tubulin/FtsZ family, C-terminal domain VV93_RS02860 SM00957 SecA DEAD-like domain VV93_RS02860 SM00958 SecA preprotein cross-linking domain VV93_RS02875 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain VV93_RS02880 SM00851 MGS-like domain VV93_RS02880 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VV93_RS02945 SM00729 Elongator protein 3, MiaB family, Radical SAM VV93_RS02950 SM00091 PAS domain VV93_RS02950 SM00267 diguanylate cyclase VV93_RS02955 SM00073 Histidine Phosphotransfer domain VV93_RS02955 SM00091 PAS domain VV93_RS02955 SM00387 Histidine kinase-like ATPases VV93_RS02955 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS02955 SM00448 cheY-homologous receiver domain VV93_RS02965 SM00448 cheY-homologous receiver domain VV93_RS02965 SM00862 Transcriptional regulatory protein, C terminal VV93_RS03005 SM00518 AP endonuclease family 2 VV93_RS03010 SM00986 Uracil DNA glycosylase superfamily VV93_RS03010 SM00987 UreE urease accessory protein, C-terminal domain VV93_RS03035 SM00487 DEAD-like helicases superfamily VV93_RS03035 SM00490 helicase superfamily c-terminal domain VV93_RS03070 SM00937 VV93_RS03070 VV93_RS03080 SM00382 ATPases associated with a variety of cellular activities VV93_RS03100 SM00927 DNA mismatch repair enzyme MutH VV93_RS03110 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VV93_RS03130 SM01154 VV93_RS03130 VV93_RS03145 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VV93_RS03160 SM00904 Riboflavin kinase VV93_RS03185 SM00448 cheY-homologous receiver domain VV93_RS03185 SM00850 LytTr DNA-binding domain VV93_RS03230 SM00830 Chorismate mutase type II VV93_RS03245 SM00382 ATPases associated with a variety of cellular activities VV93_RS03265 SM00830 Chorismate mutase type II VV93_RS03280 SM00363 S4 RNA-binding domain VV93_RS03290 SM00382 ATPases associated with a variety of cellular activities VV93_RS03290 SM01086 C-terminal, D2-small domain, of ClpB protein VV93_RS03400 SM00448 cheY-homologous receiver domain VV93_RS03400 SM00862 Transcriptional regulatory protein, C terminal VV93_RS03405 SM00091 PAS domain VV93_RS03405 SM00387 Histidine kinase-like ATPases VV93_RS03405 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS03435 SM00382 ATPases associated with a variety of cellular activities VV93_RS03495 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_RS03500 SM00020 Trypsin-like serine protease VV93_RS03515 SM01323 VV93_RS03515 VV93_RS03570 SM00271 DnaJ molecular chaperone homology domain VV93_RS03595 SM00562 VV93_RS03595 VV93_RS03625 SM00564 beta-propeller repeat VV93_RS03630 SM00173 Ras subfamily of RAS small GTPases VV93_RS03630 SM00382 ATPases associated with a variety of cellular activities VV93_RS03640 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VV93_RS03640 SM00267 diguanylate cyclase VV93_RS03655 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_RS03655 SM01240 VV93_RS03655 VV93_RS03665 SM00495 Chitin-binding domain type 3 VV93_RS03735 SM00563 Phosphate acyltransferases VV93_RS03740 SM00530 Helix-turn-helix XRE-family like proteins VV93_RS03840 SM00487 DEAD-like helicases superfamily VV93_RS03840 SM00490 helicase superfamily c-terminal domain VV93_RS03925 SM00271 DnaJ molecular chaperone homology domain VV93_RS03980 SM00062 Bacterial periplasmic substrate-binding proteins VV93_RS03985 SM01211 VV93_RS03985 VV93_RS04035 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VV93_RS04085 SM00861 Transketolase, pyrimidine binding domain VV93_RS04110 SM00981 VV93_RS04110 VV93_RS04135 SM00477 DNA/RNA non-specific endonuclease VV93_RS04135 SM00892 DNA/RNA non-specific endonuclease VV93_RS04140 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VV93_RS04140 SM00475 5'-3' exonuclease VV93_RS04150 SM00267 diguanylate cyclase VV93_RS04155 SM00028 Tetratricopeptide repeats VV93_RS04185 SM00382 ATPases associated with a variety of cellular activities VV93_RS04185 SM00930 VV93_RS04185 VV93_RS04195 SM00354 helix_turn _helix lactose operon repressor VV93_RS04205 SM00642 Alpha-amylase domain VV93_RS04225 SM00729 Elongator protein 3, MiaB family, Radical SAM VV93_RS04240 SM00936 Penicillin-binding protein 5, C-terminal domain VV93_RS04295 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_RS04295 SM01091 Transporter associated domain VV93_RS04310 SM00729 Elongator protein 3, MiaB family, Radical SAM VV93_RS04405 SM01400 VV93_RS04405 VV93_RS04425 SM00937 VV93_RS04425 VV93_RS04460 SM00363 S4 RNA-binding domain VV93_RS04465 SM00463 Small MutS-related domain VV93_RS04485 SM01081 Putative carbohydrate binding domain VV93_RS04550 SM00858 VV93_RS04550 VV93_RS04555 SM00260 Two component signalling adaptor domain VV93_RS04555 SM00448 cheY-homologous receiver domain VV93_RS04560 SM00138 Methyltransferase, chemotaxis proteins VV93_RS04605 SM00047 Lysozyme subfamily 2 VV93_RS04665 SM00771 ZipA, C-terminal domain (FtsZ-binding) VV93_RS04670 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VV93_RS04670 SM00292 breast cancer carboxy-terminal domain VV93_RS04670 SM00532 Ligase N family VV93_RS04690 SM00244 prohibitin homologues VV93_RS04720 SM00938 Nitrogen regulatory protein P-II VV93_RS04725 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_RS04750 SM00862 Transcriptional regulatory protein, C terminal VV93_RS04755 SM00387 Histidine kinase-like ATPases VV93_RS04770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS04770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS04770 SM01358 VV93_RS04770 VV93_RS04780 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VV93_RS04905 SM00861 Transketolase, pyrimidine binding domain VV93_RS04920 SM00881 CoA binding domain VV93_RS04930 SM00382 ATPases associated with a variety of cellular activities VV93_RS04940 SM00342 helix_turn_helix, arabinose operon control protein VV93_RS04945 SM00899 VV93_RS04945 VV93_RS04965 SM00836 DALR anticodon binding domain VV93_RS04965 SM01016 Arginyl tRNA synthetase N terminal dom VV93_RS04985 SM00487 DEAD-like helicases superfamily VV93_RS04985 SM00491 VV93_RS04985 VV93_RS05015 SM00474 3'-5' exonuclease VV93_RS05060 SM00448 cheY-homologous receiver domain VV93_RS05060 SM00862 Transcriptional regulatory protein, C terminal VV93_RS05065 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS05075 SM00825 Beta-ketoacyl synthase VV93_RS05090 SM00825 Beta-ketoacyl synthase VV93_RS05150 SM00563 Phosphate acyltransferases VV93_RS05180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS05180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS05190 SM00448 cheY-homologous receiver domain VV93_RS05190 SM00862 Transcriptional regulatory protein, C terminal VV93_RS05195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS05195 SM00387 Histidine kinase-like ATPases VV93_RS05215 SM00382 ATPases associated with a variety of cellular activities VV93_RS05240 SM00382 ATPases associated with a variety of cellular activities VV93_RS05240 SM00448 cheY-homologous receiver domain VV93_RS05245 SM00387 Histidine kinase-like ATPases VV93_RS05245 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS05260 SM00382 ATPases associated with a variety of cellular activities VV93_RS05260 SM00994 ClpX C4-type zinc finger VV93_RS05260 SM01086 C-terminal, D2-small domain, of ClpB protein VV93_RS05265 SM00382 ATPases associated with a variety of cellular activities VV93_RS05265 SM00464 Found in ATP-dependent protease La (LON) VV93_RS05270 SM00411 bacterial (prokaryotic) histone like domain VV93_RS05290 SM01144 VV93_RS05290 VV93_RS05295 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_RS05300 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_RS05330 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain VV93_RS05350 SM00563 Phosphate acyltransferases VV93_RS05360 SM00978 VV93_RS05360 VV93_RS05415 SM00344 helix_turn_helix ASNC type VV93_RS05445 SM00062 Bacterial periplasmic substrate-binding proteins VV93_RS05445 SM00267 diguanylate cyclase VV93_RS05465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS05475 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV93_RS05495 SM00870 VV93_RS05495 VV93_RS05515 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VV93_RS05515 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VV93_RS05515 SM00493 VV93_RS05515 VV93_RS05545 SM00267 diguanylate cyclase VV93_RS05545 SM00448 cheY-homologous receiver domain VV93_RS05550 SM00155 Phospholipase D. Active site motifs. VV93_RS05605 SM00859 Semialdehyde dehydrogenase, NAD binding domain VV93_RS05660 SM00479 VV93_RS05660 VV93_RS05680 SM00478 endonuclease III VV93_RS05680 SM00525 VV93_RS05680 VV93_RS05690 SM00900 VV93_RS05690 VV93_RS05720 SM00487 DEAD-like helicases superfamily VV93_RS05720 SM00490 helicase superfamily c-terminal domain VV93_RS05725 SM00382 ATPases associated with a variety of cellular activities VV93_RS05725 SM00448 cheY-homologous receiver domain VV93_RS05740 SM00729 Elongator protein 3, MiaB family, Radical SAM VV93_RS05745 SM00852 Probable molybdopterin binding domain VV93_RS05780 SM00382 ATPases associated with a variety of cellular activities VV93_RS05785 SM00382 ATPases associated with a variety of cellular activities VV93_RS05860 SM00481 DNA polymerase alpha chain like domain VV93_RS05875 SM00363 S4 RNA-binding domain VV93_RS05885 SM00841 Elongation factor P, C-terminal VV93_RS05885 SM01185 VV93_RS05885 VV93_RS05895 SM00052 Putative diguanylate phosphodiesterase VV93_RS05900 SM00486 DNA polymerase type-B family VV93_RS05905 SM00421 helix_turn_helix, Lux Regulon VV93_RS05905 SM00448 cheY-homologous receiver domain VV93_RS05910 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VV93_RS05910 SM00465 GIY-YIG type nucleases (URI domain) VV93_RS05975 SM00852 Probable molybdopterin binding domain VV93_RS06005 SM00434 DNA Topoisomerase IV VV93_RS06090 SM00226 Low molecular weight phosphatase family VV93_RS06100 SM00316 Ribosomal protein S1-like RNA-binding domain VV93_RS06105 SM00363 S4 RNA-binding domain VV93_RS06135 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. VV93_RS06140 SM00822 VV93_RS06140 VV93_RS06150 SM00825 Beta-ketoacyl synthase VV93_RS06215 SM00260 Two component signalling adaptor domain VV93_RS06215 SM00448 cheY-homologous receiver domain VV93_RS06220 SM00481 DNA polymerase alpha chain like domain VV93_RS06235 SM00822 VV93_RS06235 VV93_RS06250 SM00316 Ribosomal protein S1-like RNA-binding domain VV93_RS06255 SM00411 bacterial (prokaryotic) histone like domain VV93_RS06265 SM00028 Tetratricopeptide repeats VV93_RS06270 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family VV93_RS06290 SM00382 ATPases associated with a variety of cellular activities VV93_RS06295 SM00382 ATPases associated with a variety of cellular activities VV93_RS06340 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VV93_RS06340 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VV93_RS06345 SM00344 helix_turn_helix ASNC type VV93_RS06350 SM00843 VV93_RS06350 VV93_RS06360 SM00382 ATPases associated with a variety of cellular activities VV93_RS06375 SM00729 Elongator protein 3, MiaB family, Radical SAM VV93_RS06375 SM00876 Biotin and Thiamin Synthesis associated domain VV93_RS06465 SM00528 Domain in histone-like proteins of HNS family VV93_RS06520 SM00052 Putative diguanylate phosphodiesterase VV93_RS06535 SM00840 VV93_RS06535 VV93_RS06630 SM01131 VV93_RS06630 VV93_RS06645 SM00382 ATPases associated with a variety of cellular activities VV93_RS06650 SM00382 ATPases associated with a variety of cellular activities VV93_RS06670 SM00382 ATPases associated with a variety of cellular activities VV93_RS06715 SM00155 Phospholipase D. Active site motifs. VV93_RS06725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS06725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS06760 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VV93_RS06760 SM00382 ATPases associated with a variety of cellular activities VV93_RS06770 SM00382 ATPases associated with a variety of cellular activities VV93_RS06800 SM00267 diguanylate cyclase VV93_RS06820 SM00387 Histidine kinase-like ATPases VV93_RS06825 SM00448 cheY-homologous receiver domain VV93_RS06825 SM00862 Transcriptional regulatory protein, C terminal VV93_RS06835 SM00487 DEAD-like helicases superfamily VV93_RS06835 SM00490 helicase superfamily c-terminal domain VV93_RS06850 SM00363 S4 RNA-binding domain VV93_RS06875 SM00382 ATPases associated with a variety of cellular activities VV93_RS06960 SM00448 cheY-homologous receiver domain VV93_RS06965 SM00387 Histidine kinase-like ATPases VV93_RS06980 SM00382 ATPases associated with a variety of cellular activities VV93_RS06985 SM00382 ATPases associated with a variety of cellular activities VV93_RS07010 SM00267 diguanylate cyclase VV93_RS07025 SM00919 Malic enzyme, NAD binding domain VV93_RS07025 SM01274 VV93_RS07025 VV93_RS07030 SM00487 DEAD-like helicases superfamily VV93_RS07030 SM00490 helicase superfamily c-terminal domain VV93_RS07030 SM00847 Helicase associated domain (HA2) Add an annotation VV93_RS07095 SM00855 Phosphoglycerate mutase family VV93_RS07115 SM00382 ATPases associated with a variety of cellular activities VV93_RS07160 SM00028 Tetratricopeptide repeats VV93_RS07230 SM00267 diguanylate cyclase VV93_RS07235 SM00357 Cold shock protein domain VV93_RS07250 SM00420 helix_turn_helix, Deoxyribose operon repressor VV93_RS07250 SM01134 VV93_RS07250 VV93_RS07255 SM00382 ATPases associated with a variety of cellular activities VV93_RS07275 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_RS07280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS07280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS07290 SM00020 Trypsin-like serine protease VV93_RS07295 SM00421 helix_turn_helix, Lux Regulon VV93_RS07335 SM00062 Bacterial periplasmic substrate-binding proteins VV93_RS07335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS07335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_RS07340 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV93_RS07340 SM00895 VV93_RS07340 VV93_RS07385 SM00020 Trypsin-like serine protease VV93_RS07385 SM00495 Chitin-binding domain type 3 VV93_RS07395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS07395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS07415 SM00028 Tetratricopeptide repeats VV93_RS07415 SM00267 diguanylate cyclase VV93_RS07440 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VV93_RS07445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS07470 SM00382 ATPases associated with a variety of cellular activities VV93_RS07485 SM00062 Bacterial periplasmic substrate-binding proteins VV93_RS07505 SM00563 Phosphate acyltransferases VV93_RS07540 SM00421 helix_turn_helix, Lux Regulon VV93_RS07570 SM00091 PAS domain VV93_RS07570 SM00387 Histidine kinase-like ATPases VV93_RS07575 SM00448 cheY-homologous receiver domain VV93_RS07590 SM01350 VV93_RS07590 VV93_RS07675 SM00382 ATPases associated with a variety of cellular activities VV93_RS07675 SM00448 cheY-homologous receiver domain VV93_RS07680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS07680 SM00387 Histidine kinase-like ATPases VV93_RS07680 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS07680 SM00448 cheY-homologous receiver domain VV93_RS07715 SM00028 Tetratricopeptide repeats VV93_RS07715 SM00267 diguanylate cyclase VV93_RS07760 SM00382 ATPases associated with a variety of cellular activities VV93_RS07770 SM00945 ProQ/FINO family VV93_RS07775 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VV93_RS07775 SM00245 tail specific protease VV93_RS07805 SM00981 VV93_RS07805 VV93_RS07815 SM00382 ATPases associated with a variety of cellular activities VV93_RS07890 SM00530 Helix-turn-helix XRE-family like proteins VV93_RS07945 SM00387 Histidine kinase-like ATPases VV93_RS07945 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS07945 SM00448 cheY-homologous receiver domain VV93_RS07950 SM00897 FIST N domain VV93_RS07950 SM01204 VV93_RS07950 VV93_RS08000 SM00100 Cyclic nucleotide-monophosphate binding domain VV93_RS08000 SM00419 helix_turn_helix, cAMP Regulatory protein VV93_RS08030 SM00382 ATPases associated with a variety of cellular activities VV93_RS08110 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VV93_RS08145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS08145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS08150 SM00382 ATPases associated with a variety of cellular activities VV93_RS08165 SM00387 Histidine kinase-like ATPases VV93_RS08165 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS08170 SM00382 ATPases associated with a variety of cellular activities VV93_RS08170 SM00448 cheY-homologous receiver domain VV93_RS08185 SM00382 ATPases associated with a variety of cellular activities VV93_RS08195 SM00852 Probable molybdopterin binding domain VV93_RS08210 SM01144 VV93_RS08210 VV93_RS08220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS08235 SM00267 diguanylate cyclase VV93_RS08240 SM00448 cheY-homologous receiver domain VV93_RS08405 SM01022 VV93_RS08405 VV93_RS08685 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VV93_RS08700 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV93_RS08700 SM00866 VV93_RS08700 VV93_RS08730 SM00020 Trypsin-like serine protease VV93_RS08760 SM00671 Sel1-like repeats. VV93_RS08785 SM00954 Region found in RelA / SpoT proteins VV93_RS08790 SM00411 bacterial (prokaryotic) histone like domain VV93_RS08820 SM00873 B3/4 domain VV93_RS08820 SM00874 tRNA synthetase B5 domain VV93_RS08820 SM00896 Ferredoxin-fold anticodon binding domain VV93_RS08830 SM00267 diguanylate cyclase VV93_RS08865 SM00530 Helix-turn-helix XRE-family like proteins VV93_RS08900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS08900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS08950 SM00382 ATPases associated with a variety of cellular activities VV93_RS08950 SM00487 DEAD-like helicases superfamily VV93_RS08950 SM00490 helicase superfamily c-terminal domain VV93_RS08950 SM00847 Helicase associated domain (HA2) Add an annotation VV93_RS08955 SM00636 VV93_RS08955 VV93_RS08980 SM00028 Tetratricopeptide repeats VV93_RS09015 SM00858 VV93_RS09015 VV93_RS09070 SM00479 VV93_RS09070 VV93_RS09075 SM00267 diguanylate cyclase VV93_RS09075 SM01079 VV93_RS09075 VV93_RS09105 SM00267 diguanylate cyclase VV93_RS09195 SM00382 ATPases associated with a variety of cellular activities VV93_RS09200 SM00382 ATPases associated with a variety of cellular activities VV93_RS09235 SM00046 Diacylglycerol kinase catalytic domain (presumed) VV93_RS09250 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_RS09255 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. VV93_RS09280 SM00052 Putative diguanylate phosphodiesterase VV93_RS09280 SM00267 diguanylate cyclase VV93_RS09285 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_RS09300 SM00052 Putative diguanylate phosphodiesterase VV93_RS09300 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VV93_RS09300 SM00267 diguanylate cyclase VV93_RS09305 SM00267 diguanylate cyclase VV93_RS09310 SM00448 cheY-homologous receiver domain VV93_RS09315 SM00100 Cyclic nucleotide-monophosphate binding domain VV93_RS09315 SM00387 Histidine kinase-like ATPases VV93_RS09340 SM00091 PAS domain VV93_RS09340 SM00382 ATPases associated with a variety of cellular activities VV93_RS09370 SM00387 Histidine kinase-like ATPases VV93_RS09370 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS09370 SM00448 cheY-homologous receiver domain VV93_RS09395 SM00052 Putative diguanylate phosphodiesterase VV93_RS09410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS09410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS09425 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV93_RS09470 SM00100 Cyclic nucleotide-monophosphate binding domain VV93_RS09470 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_RS09475 SM00479 VV93_RS09475 VV93_RS09480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS09480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS09490 SM00347 helix_turn_helix multiple antibiotic resistance protein VV93_RS09495 SM00421 helix_turn_helix, Lux Regulon VV93_RS09495 SM00448 cheY-homologous receiver domain VV93_RS09500 SM00387 Histidine kinase-like ATPases VV93_RS09500 SM01049 VV93_RS09500 VV93_RS09530 SM00849 Metallo-beta-lactamase superfamily VV93_RS09570 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV93_RS09600 SM00642 Alpha-amylase domain VV93_RS09605 SM00382 ATPases associated with a variety of cellular activities VV93_RS09655 SM00052 Putative diguanylate phosphodiesterase VV93_RS09655 SM00091 PAS domain VV93_RS09660 SM00052 Putative diguanylate phosphodiesterase VV93_RS09660 SM00091 PAS domain VV93_RS09665 SM00729 Elongator protein 3, MiaB family, Radical SAM VV93_RS09670 SM00052 Putative diguanylate phosphodiesterase VV93_RS09670 SM00267 diguanylate cyclase VV93_RS09670 SM01049 VV93_RS09670 VV93_RS09685 SM00342 helix_turn_helix, arabinose operon control protein VV93_RS09715 SM01007 Class II Aldolase and Adducin N-terminal domain VV93_RS09740 SM00420 helix_turn_helix, Deoxyribose operon repressor VV93_RS09740 SM01134 VV93_RS09740 VV93_RS09745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS09785 SM00530 Helix-turn-helix XRE-family like proteins VV93_RS09795 SM00487 DEAD-like helicases superfamily VV93_RS09795 SM00490 helicase superfamily c-terminal domain VV93_RS09830 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS09835 SM00448 cheY-homologous receiver domain VV93_RS09835 SM00862 Transcriptional regulatory protein, C terminal VV93_RS09860 SM00267 diguanylate cyclase VV93_RS09880 SM01007 Class II Aldolase and Adducin N-terminal domain VV93_RS09895 SM00420 helix_turn_helix, Deoxyribose operon repressor VV93_RS09895 SM01134 VV93_RS09895 VV93_RS09975 SM00857 Resolvase, N terminal domain VV93_RS10000 SM00387 Histidine kinase-like ATPases VV93_RS10000 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS10000 SM00448 cheY-homologous receiver domain VV93_RS10035 SM00028 Tetratricopeptide repeats VV93_RS10090 SM00382 ATPases associated with a variety of cellular activities VV93_RS10095 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VV93_RS10100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS10165 SM00342 helix_turn_helix, arabinose operon control protein VV93_RS10195 SM00448 cheY-homologous receiver domain VV93_RS10195 SM00862 Transcriptional regulatory protein, C terminal VV93_RS10205 SM00354 helix_turn _helix lactose operon repressor VV93_RS10240 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VV93_RS10240 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VV93_RS10240 SM00493 VV93_RS10240 VV93_RS10275 SM00316 Ribosomal protein S1-like RNA-binding domain VV93_RS10280 SM00382 ATPases associated with a variety of cellular activities VV93_RS10280 SM01086 C-terminal, D2-small domain, of ClpB protein VV93_RS10290 SM00357 Cold shock protein domain VV93_RS10315 SM00491 VV93_RS10315 VV93_RS10335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS10335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS10345 SM01276 VV93_RS10345 VV93_RS10360 SM00062 Bacterial periplasmic substrate-binding proteins VV93_RS10360 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VV93_RS10365 SM00382 ATPases associated with a variety of cellular activities VV93_RS10390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS10390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS10415 SM00763 PrkA AAA domain VV93_RS10430 SM00267 diguanylate cyclase VV93_RS10450 SM00382 ATPases associated with a variety of cellular activities VV93_RS10470 SM00382 ATPases associated with a variety of cellular activities VV93_RS10485 SM00487 DEAD-like helicases superfamily VV93_RS10485 SM00490 helicase superfamily c-terminal domain VV93_RS10485 SM00982 VV93_RS10485 VV93_RS10485 SM01058 CarD-like/TRCF domain VV93_RS10535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS10535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS10555 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_RS10560 SM00267 diguanylate cyclase VV93_RS10575 SM00862 Transcriptional regulatory protein, C terminal VV93_RS10585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS10585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS10595 SM00267 diguanylate cyclase VV93_RS10630 SM00098 Alkaline phosphatase homologues VV93_RS10665 SM00448 cheY-homologous receiver domain VV93_RS10665 SM00862 Transcriptional regulatory protein, C terminal VV93_RS10670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS10670 SM00387 Histidine kinase-like ATPases VV93_RS10670 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS10700 SM00493 VV93_RS10700 VV93_RS10710 SM00382 ATPases associated with a variety of cellular activities VV93_RS10725 SM00448 cheY-homologous receiver domain VV93_RS10770 SM00859 Semialdehyde dehydrogenase, NAD binding domain VV93_RS10780 SM00825 Beta-ketoacyl synthase VV93_RS10815 SM00463 Small MutS-related domain VV93_RS10820 SM00855 Phosphoglycerate mutase family VV93_RS10905 SM00382 ATPases associated with a variety of cellular activities VV93_RS10915 SM00260 Two component signalling adaptor domain VV93_RS10920 SM00260 Two component signalling adaptor domain VV93_RS10930 SM00448 cheY-homologous receiver domain VV93_RS10935 SM00073 Histidine Phosphotransfer domain VV93_RS10935 SM00260 Two component signalling adaptor domain VV93_RS10935 SM00387 Histidine kinase-like ATPases VV93_RS10935 SM01231 VV93_RS10935 VV93_RS10945 SM00448 cheY-homologous receiver domain VV93_RS10960 SM00382 ATPases associated with a variety of cellular activities VV93_RS10960 SM00962 SRP54-type protein, GTPase domain VV93_RS11020 SM00382 ATPases associated with a variety of cellular activities VV93_RS11045 SM00382 ATPases associated with a variety of cellular activities VV93_RS11045 SM00448 cheY-homologous receiver domain VV93_RS11050 SM00387 Histidine kinase-like ATPases VV93_RS11050 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS11055 SM00382 ATPases associated with a variety of cellular activities VV93_RS11145 SM01130 VV93_RS11145 VV93_RS11185 SM00857 Resolvase, N terminal domain VV93_RS11210 SM00530 Helix-turn-helix XRE-family like proteins VV93_RS11265 SM00028 Tetratricopeptide repeats VV93_RS11350 SM00479 VV93_RS11350 VV93_RS11365 SM00849 Metallo-beta-lactamase superfamily VV93_RS11370 SM00257 Lysin motif VV93_RS11385 SM00938 Nitrogen regulatory protein P-II VV93_RS11395 SM00977 TilS substrate C-terminal domain VV93_RS11405 SM00481 DNA polymerase alpha chain like domain VV93_RS11435 SM00935 Outer membrane protein (OmpH-like) VV93_RS11445 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VV93_RS11490 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_RS11585 SM00495 Chitin-binding domain type 3 VV93_RS11585 SM00636 VV93_RS11585 VV93_RS11595 SM00487 DEAD-like helicases superfamily VV93_RS11595 SM00490 helicase superfamily c-terminal domain VV93_RS11605 SM00267 diguanylate cyclase VV93_RS11605 SM00448 cheY-homologous receiver domain VV93_RS11635 SM00900 VV93_RS11635 VV93_RS11725 SM00925 MltA specific insert domain VV93_RS11805 SM00420 helix_turn_helix, Deoxyribose operon repressor VV93_RS11805 SM01134 VV93_RS11805 VV93_RS11845 SM00354 helix_turn _helix lactose operon repressor VV93_RS11850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS11850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS11850 SM01049 VV93_RS11850 VV93_RS11865 SM00354 helix_turn _helix lactose operon repressor VV93_RS11890 SM00354 helix_turn _helix lactose operon repressor VV93_RS11900 SM01038 Beta galactosidase small chain VV93_RS11940 SM00028 Tetratricopeptide repeats VV93_RS11990 SM00858 VV93_RS11990 VV93_RS12015 SM00342 helix_turn_helix, arabinose operon control protein VV93_RS12045 SM00838 Elongation factor G C-terminus VV93_RS12045 SM00889 Elongation factor G, domain IV VV93_RS12060 SM00267 diguanylate cyclase VV93_RS12065 SM00382 ATPases associated with a variety of cellular activities VV93_RS12095 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain VV93_RS12100 SM01133 VV93_RS12100 VV93_RS12120 SM00267 diguanylate cyclase VV93_RS12125 SM00052 Putative diguanylate phosphodiesterase VV93_RS12125 SM00267 diguanylate cyclase VV93_RS12150 SM00052 Putative diguanylate phosphodiesterase VV93_RS12150 SM00091 PAS domain VV93_RS12150 SM00267 diguanylate cyclase VV93_RS12170 SM00347 helix_turn_helix multiple antibiotic resistance protein VV93_RS12175 SM00028 Tetratricopeptide repeats VV93_RS12180 SM00316 Ribosomal protein S1-like RNA-binding domain VV93_RS12180 SM00322 K homology RNA-binding domain VV93_RS12205 SM01387 VV93_RS12205 VV93_RS12225 SM00316 Ribosomal protein S1-like RNA-binding domain VV93_RS12260 SM00382 ATPases associated with a variety of cellular activities VV93_RS12270 SM01103 VV93_RS12270 VV93_RS12340 SM00091 PAS domain VV93_RS12340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS12340 SM00387 Histidine kinase-like ATPases VV93_RS12340 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS12340 SM00448 cheY-homologous receiver domain VV93_RS12360 SM00382 ATPases associated with a variety of cellular activities VV93_RS12365 SM00382 ATPases associated with a variety of cellular activities VV93_RS12385 SM01068 Putative carbohydrate binding domain VV93_RS12395 SM00382 ATPases associated with a variety of cellular activities VV93_RS12415 SM00938 Nitrogen regulatory protein P-II VV93_RS12455 SM00487 DEAD-like helicases superfamily VV93_RS12455 SM00490 helicase superfamily c-terminal domain VV93_RS12455 SM00847 Helicase associated domain (HA2) Add an annotation VV93_RS12500 SM00382 ATPases associated with a variety of cellular activities VV93_RS12510 SM00947 Carbonic anhydrase VV93_RS12540 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV93_RS12540 SM00895 VV93_RS12540 VV93_RS12545 SM00644 VV93_RS12545 VV93_RS12610 SM00382 ATPases associated with a variety of cellular activities VV93_RS12610 SM00962 SRP54-type protein, GTPase domain VV93_RS12610 SM00963 SRP54-type protein, helical bundle domain VV93_RS12620 SM01091 Transporter associated domain VV93_RS12650 SM00829 Enoylreductase VV93_RS12720 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VV93_RS12730 SM00382 ATPases associated with a variety of cellular activities VV93_RS12740 SM00533 DNA-binding domain of DNA mismatch repair MUTS family VV93_RS12740 SM00534 ATPase domain of DNA mismatch repair MUTS family VV93_RS12750 SM00257 Lysin motif VV93_RS12785 SM01192 VV93_RS12785 VV93_RS12785 SM01193 VV93_RS12785 VV93_RS12800 SM00954 Region found in RelA / SpoT proteins VV93_RS12810 SM00073 Histidine Phosphotransfer domain VV93_RS12810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS12810 SM00387 Histidine kinase-like ATPases VV93_RS12810 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS12810 SM00448 cheY-homologous receiver domain VV93_RS12815 SM00267 diguanylate cyclase VV93_RS12850 SM00358 Double-stranded RNA binding motif VV93_RS12850 SM00535 Ribonuclease III family VV93_RS12860 SM00838 Elongation factor G C-terminus VV93_RS12980 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV93_RS12990 SM00861 Transketolase, pyrimidine binding domain VV93_RS13005 SM00731 SprT homologues. VV93_RS13035 SM00732 Likely ribonuclease with RNase H fold. VV93_RS13065 SM01152 VV93_RS13065 VV93_RS13080 SM00729 Elongator protein 3, MiaB family, Radical SAM VV93_RS13085 SM00478 endonuclease III VV93_RS13100 SM00478 endonuclease III VV93_RS13100 SM00525 VV93_RS13100 VV93_RS13130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS13130 SM01049 VV93_RS13130 VV93_RS13170 SM00849 Metallo-beta-lactamase superfamily VV93_RS13215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_RS13225 SM00354 helix_turn _helix lactose operon repressor VV93_RS13255 SM00495 Chitin-binding domain type 3 VV93_RS13445 SM00487 DEAD-like helicases superfamily VV93_RS13445 SM00490 helicase superfamily c-terminal domain VV93_RS13450 SM00670 Large family of predicted nucleotide-binding domains VV93_RS13470 SM00316 Ribosomal protein S1-like RNA-binding domain VV93_RS13540 SM00382 ATPases associated with a variety of cellular activities VV93_RS13545 SM00028 Tetratricopeptide repeats VV93_RS13555 SM00965 Secretin and TonB N terminus short domain VV93_RS13575 SM00052 Putative diguanylate phosphodiesterase VV93_RS13575 SM00267 diguanylate cyclase VV93_RS13585 SM00421 helix_turn_helix, Lux Regulon VV93_RS13615 SM01018 B12 binding domain VV93_RS13625 SM00091 PAS domain VV93_RS13625 SM00267 diguanylate cyclase VV93_RS13750 SM01005 Alanine racemase, C-terminal domain VV93_RS13810 SM00965 Secretin and TonB N terminus short domain VV93_RS13865 SM00859 Semialdehyde dehydrogenase, NAD binding domain VV93_RS13905 SM00919 Malic enzyme, NAD binding domain VV93_RS13905 SM01274 VV93_RS13905 VV93_RS13915 SM00487 DEAD-like helicases superfamily VV93_RS13915 SM00490 helicase superfamily c-terminal domain VV93_RS13920 SM00354 helix_turn _helix lactose operon repressor VV93_RS13935 SM00382 ATPases associated with a variety of cellular activities VV93_RS13935 SM01086 C-terminal, D2-small domain, of ClpB protein VV93_RS14005 SM00838 Elongation factor G C-terminus VV93_RS14005 SM00889 Elongation factor G, domain IV VV93_RS14045 SM00320 WD40 repeats VV93_RS14080 SM00382 ATPases associated with a variety of cellular activities VV93_RS14105 SM00100 Cyclic nucleotide-monophosphate binding domain VV93_RS14105 SM00419 helix_turn_helix, cAMP Regulatory protein VV93_RS14110 SM01150 VV93_RS14110 VV93_RS14155 SM00967 RNA 2'-O ribose methyltransferase substrate binding VV93_RS14160 SM00316 Ribosomal protein S1-like RNA-binding domain VV93_RS14160 SM00357 Cold shock protein domain VV93_RS14160 SM00955 VV93_RS14160 VV93_RS14180 SM00671 Sel1-like repeats. VV93_RS14185 SM00788 Adenylosuccinate synthetase VV93_RS14195 SM00244 prohibitin homologues VV93_RS14200 SM00244 prohibitin homologues VV93_RS14220 SM00853 MutL C terminal dimerisation domain VV93_RS14220 SM01340 VV93_RS14220 VV93_RS14225 SM00257 Lysin motif VV93_RS14225 SM00646 VV93_RS14225 VV93_RS14295 SM00479 VV93_RS14295 VV93_RS14330 SM00450 Rhodanese Homology Domain VV93_RS14345 SM00971 Serine acetyltransferase, N-terminal VV93_RS14400 SM00841 Elongation factor P, C-terminal VV93_RS14400 SM01185 VV93_RS14400 VV93_RS14425 SM00883 Chaperonin 10 Kd subunit VV93_RS14450 SM00448 cheY-homologous receiver domain VV93_RS14450 SM00862 Transcriptional regulatory protein, C terminal VV93_RS14455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS14455 SM00387 Histidine kinase-like ATPases VV93_RS14455 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS14490 SM00421 helix_turn_helix, Lux Regulon VV93_RS14490 SM00448 cheY-homologous receiver domain VV93_RS14510 SM00387 Histidine kinase-like ATPases VV93_RS14510 SM00388 His Kinase A (phosphoacceptor) domain VV93_RS14510 SM00448 cheY-homologous receiver domain VV93_RS14520 SM00100 Cyclic nucleotide-monophosphate binding domain VV93_RS14525 SM00479 VV93_RS14525 VV93_RS14545 SM00878 Biotin carboxylase C-terminal domain VV93_RS14565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_RS14565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS14565 SM01049 VV93_RS14565 VV93_RS14570 SM00422 helix_turn_helix, mercury resistance VV93_RS14575 SM00798 AICARFT/IMPCHase bienzyme VV93_RS14575 SM00851 MGS-like domain VV93_RS14580 SM01209 VV93_RS14580 VV93_RS14580 SM01210 VV93_RS14580 VV93_RS14600 SM00411 bacterial (prokaryotic) histone like domain VV93_RS14620 SM00986 Uracil DNA glycosylase superfamily VV93_RS14620 SM00987 UreE urease accessory protein, C-terminal domain VV93_RS14650 SM00663 RNA polymerase I subunit A N-terminus VV93_RS14675 SM00649 Ribosomal protein L11/L12 VV93_RS14680 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VV93_RS14680 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VV93_RS14735 SM00155 Phospholipase D. Active site motifs. VV93_RS14820 SM00357 Cold shock protein domain VV93_RS14820 SM00382 ATPases associated with a variety of cellular activities VV93_RS14820 SM00959 Rho termination factor, N-terminal domain VV93_RS14830 SM00487 DEAD-like helicases superfamily VV93_RS14830 SM00490 helicase superfamily c-terminal domain VV93_RS14850 SM00341 Helicase and RNase D C-terminal VV93_RS14850 SM00487 DEAD-like helicases superfamily VV93_RS14850 SM00490 helicase superfamily c-terminal domain VV93_RS14850 SM00956 VV93_RS14850 VV93_RS14860 SM00342 helix_turn_helix, arabinose operon control protein VV93_RS14910 SM00876 Biotin and Thiamin Synthesis associated domain VV93_RS15040 SM01001 AIR carboxylase VV93_RS15065 SM00257 Lysin motif VV93_RS15125 SM00563 Phosphate acyltransferases VV93_RS15135 SM00382 ATPases associated with a variety of cellular activities VV93_RS15175 SM00062 Bacterial periplasmic substrate-binding proteins VV93_RS15195 SM00382 ATPases associated with a variety of cellular activities VV93_RS15235 SM00470 ParB-like nuclease domain VV93_RS15250 SM01228 VV93_RS15250 VV93_RS15325 SM00487 DEAD-like helicases superfamily VV93_RS15375 SM00382 ATPases associated with a variety of cellular activities VV93_RS15385 SM00062 Bacterial periplasmic substrate-binding proteins VV93_RS16170 SM00267 diguanylate cyclase VV93_RS16170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_RS16365 SM00954 Region found in RelA / SpoT proteins VV93_RS16955 SM01382 VV93_RS16955 VV93_RS17380 SM00091 PAS domain VV93_RS17380 SM00267 diguanylate cyclase VV93_RS17710 SM00434 DNA Topoisomerase IV VV93_RS17905 SM00957 SecA DEAD-like domain VV93_RS17905 SM00958 SecA preprotein cross-linking domain VV93_RS17920 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain VV93_RS19005 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VV93_RS19865 SM00487 DEAD-like helicases superfamily VV93_RS20245 SM00267 diguanylate cyclase VV93_RS20335 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VV93_RS20335 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VV93_RS20670 SM00486 DNA polymerase type-B family VV93_RS20735 SM00852 Probable molybdopterin binding domain VV93_RS21050 SM00316 Ribosomal protein S1-like RNA-binding domain VV93_RS21985 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_RS22600 SM00981 VV93_RS22600 VV93_RS23075 SM00530 Helix-turn-helix XRE-family like proteins