VV93_RS12360 1f34e21a4036735053bbfb7148ef85b2 327 Gene3D G3DSA:3.40.50.300 4 253 1.4E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12360 1f34e21a4036735053bbfb7148ef85b2 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 4.5E-23 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV93_RS12360 1f34e21a4036735053bbfb7148ef85b2 327 SMART SM00382 34 231 1.3E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS12360 1f34e21a4036735053bbfb7148ef85b2 327 Pfam PF00005 ABC transporter 26 181 1.2E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS12360 1f34e21a4036735053bbfb7148ef85b2 327 PANTHER PTHR24220:SF535 7 318 1.6E-137 T 23-04-2016 VV93_RS12360 1f34e21a4036735053bbfb7148ef85b2 327 SUPERFAMILY SSF52540 5 252 2.32E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12360 1f34e21a4036735053bbfb7148ef85b2 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS12360 1f34e21a4036735053bbfb7148ef85b2 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 3.2E-17 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV93_RS12360 1f34e21a4036735053bbfb7148ef85b2 327 PANTHER PTHR24220 7 318 1.6E-137 T 23-04-2016 VV93_RS15060 ddb9c860f95ae154ace8ab3fb34de2f9 367 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 75 286 2.5E-77 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 VV93_RS15060 ddb9c860f95ae154ace8ab3fb34de2f9 367 PANTHER PTHR32039 52 366 8.1E-112 T 23-04-2016 VV93_RS15060 ddb9c860f95ae154ace8ab3fb34de2f9 367 PANTHER PTHR32039:SF8 52 366 8.1E-112 T 23-04-2016 VV93_RS15060 ddb9c860f95ae154ace8ab3fb34de2f9 367 Pfam PF02481 DNA recombination-mediator protein A 76 278 4.6E-75 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 VV93_RS15060 ddb9c860f95ae154ace8ab3fb34de2f9 367 SUPERFAMILY SSF102405 81 286 4.27E-40 T 23-04-2016 VV93_RS15060 ddb9c860f95ae154ace8ab3fb34de2f9 367 Gene3D G3DSA:3.40.50.450 113 257 5.6E-12 T 23-04-2016 VV93_RS14145 3e2a0bbe80dc0a0c6b7592f9a3080638 338 PANTHER PTHR10055:SF10 2 338 6.1E-177 T 23-04-2016 VV93_RS14145 3e2a0bbe80dc0a0c6b7592f9a3080638 338 Gene3D G3DSA:1.10.240.10 209 328 4.0E-19 T 23-04-2016 VV93_RS14145 3e2a0bbe80dc0a0c6b7592f9a3080638 338 PANTHER PTHR10055 2 338 6.1E-177 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VV93_RS14145 3e2a0bbe80dc0a0c6b7592f9a3080638 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.615 T 23-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 VV93_RS14145 3e2a0bbe80dc0a0c6b7592f9a3080638 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 2.7E-76 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS14145 3e2a0bbe80dc0a0c6b7592f9a3080638 338 SUPERFAMILY SSF52374 5 334 1.13E-91 T 23-04-2016 VV93_RS14145 3e2a0bbe80dc0a0c6b7592f9a3080638 338 Gene3D G3DSA:3.40.50.620 4 208 1.3E-85 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS14145 3e2a0bbe80dc0a0c6b7592f9a3080638 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 5.8E-108 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VV93_RS14145 3e2a0bbe80dc0a0c6b7592f9a3080638 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VV93_RS14145 3e2a0bbe80dc0a0c6b7592f9a3080638 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VV93_RS14145 3e2a0bbe80dc0a0c6b7592f9a3080638 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VV93_RS14145 3e2a0bbe80dc0a0c6b7592f9a3080638 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VV93_RS00580 8c1c7eca1d017aa3da3611961167a6bc 106 PANTHER PTHR12231 22 104 2.6E-13 T 23-04-2016 VV93_RS00580 8c1c7eca1d017aa3da3611961167a6bc 106 SUPERFAMILY SSF52821 1 105 1.96E-28 T 23-04-2016 IPR001763 Rhodanese-like domain VV93_RS00580 8c1c7eca1d017aa3da3611961167a6bc 106 SMART SM00450 7 102 2.2E-17 T 23-04-2016 IPR001763 Rhodanese-like domain VV93_RS00580 8c1c7eca1d017aa3da3611961167a6bc 106 Gene3D G3DSA:3.40.250.10 2 104 1.6E-28 T 23-04-2016 IPR001763 Rhodanese-like domain VV93_RS00580 8c1c7eca1d017aa3da3611961167a6bc 106 Pfam PF00581 Rhodanese-like domain 13 98 5.6E-11 T 23-04-2016 IPR001763 Rhodanese-like domain VV93_RS00580 8c1c7eca1d017aa3da3611961167a6bc 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 106 34.411 T 23-04-2016 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 VV93_RS07230 a0c6a147c8aedb49cc495ce262a40507 388 PANTHER PTHR10799:SF710 111 383 1.4E-21 T 23-04-2016 VV93_RS07230 a0c6a147c8aedb49cc495ce262a40507 388 SUPERFAMILY SSF55073 233 387 1.49E-43 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS07230 a0c6a147c8aedb49cc495ce262a40507 388 SMART SM00267 217 387 1.6E-54 T 23-04-2016 IPR000160 GGDEF domain VV93_RS07230 a0c6a147c8aedb49cc495ce262a40507 388 PANTHER PTHR10799 111 383 1.4E-21 T 23-04-2016 VV93_RS07230 a0c6a147c8aedb49cc495ce262a40507 388 Gene3D G3DSA:3.30.70.270 231 387 2.4E-47 T 23-04-2016 VV93_RS07230 a0c6a147c8aedb49cc495ce262a40507 388 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 224 387 9.0E-44 T 23-04-2016 IPR000160 GGDEF domain VV93_RS07230 a0c6a147c8aedb49cc495ce262a40507 388 Pfam PF00990 Diguanylate cyclase, GGDEF domain 230 383 3.2E-42 T 23-04-2016 IPR000160 GGDEF domain VV93_RS00235 c1273470faf1366e070523be4ca36f3e 571 Pfam PF00005 ABC transporter 330 483 1.6E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS00235 c1273470faf1366e070523be4ca36f3e 571 Pfam PF00005 ABC transporter 24 181 9.3E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS00235 c1273470faf1366e070523be4ca36f3e 571 Gene3D G3DSA:3.40.50.300 301 555 4.2E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00235 c1273470faf1366e070523be4ca36f3e 571 Gene3D G3DSA:3.40.50.300 2 255 4.1E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00235 c1273470faf1366e070523be4ca36f3e 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 565 0.0013 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV93_RS00235 c1273470faf1366e070523be4ca36f3e 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 271 1.9E-7 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV93_RS00235 c1273470faf1366e070523be4ca36f3e 571 SMART SM00382 32 231 8.6E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS00235 c1273470faf1366e070523be4ca36f3e 571 SMART SM00382 338 534 5.5E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS00235 c1273470faf1366e070523be4ca36f3e 571 PANTHER PTHR24220 329 440 1.7E-204 T 23-04-2016 VV93_RS00235 c1273470faf1366e070523be4ca36f3e 571 PANTHER PTHR24220 5 293 1.7E-204 T 23-04-2016 VV93_RS00235 c1273470faf1366e070523be4ca36f3e 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS00235 c1273470faf1366e070523be4ca36f3e 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS00235 c1273470faf1366e070523be4ca36f3e 571 PANTHER PTHR24220:SF336 329 440 1.7E-204 T 23-04-2016 VV93_RS00235 c1273470faf1366e070523be4ca36f3e 571 PANTHER PTHR24220:SF336 5 293 1.7E-204 T 23-04-2016 VV93_RS00235 c1273470faf1366e070523be4ca36f3e 571 SUPERFAMILY SSF52540 304 553 2.24E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00235 c1273470faf1366e070523be4ca36f3e 571 SUPERFAMILY SSF52540 3 253 6.32E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00240 83a3a1d31c836b82dfc757a173e0c2a5 518 Gene3D G3DSA:3.40.190.10 125 284 2.3E-39 T 23-04-2016 VV93_RS00240 83a3a1d31c836b82dfc757a173e0c2a5 518 Gene3D G3DSA:3.10.105.10 285 487 9.7E-57 T 23-04-2016 VV93_RS00240 83a3a1d31c836b82dfc757a173e0c2a5 518 SUPERFAMILY SSF53850 26 516 5.43E-129 T 23-04-2016 VV93_RS00240 83a3a1d31c836b82dfc757a173e0c2a5 518 PANTHER PTHR30290 26 514 1.0E-185 T 23-04-2016 VV93_RS00240 83a3a1d31c836b82dfc757a173e0c2a5 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 425 2.6E-86 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain VV93_RS00240 83a3a1d31c836b82dfc757a173e0c2a5 518 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 23-04-2016 IPR023765 Solute-binding protein family 5, conserved site VV93_RS00240 83a3a1d31c836b82dfc757a173e0c2a5 518 PIRSF PIRSF002741 20 502 9.3E-95 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VV93_RS00240 83a3a1d31c836b82dfc757a173e0c2a5 518 PANTHER PTHR30290:SF24 26 514 1.0E-185 T 23-04-2016 VV93_RS03680 858133d5c97783504ff38a9c5477da74 417 Gene3D G3DSA:3.40.50.720 78 107 6.8E-6 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS03680 858133d5c97783504ff38a9c5477da74 417 SUPERFAMILY SSF54373 270 360 1.7E-17 T 23-04-2016 VV93_RS03680 858133d5c97783504ff38a9c5477da74 417 Gene3D G3DSA:3.30.9.10 270 359 9.9E-15 T 23-04-2016 VV93_RS03680 858133d5c97783504ff38a9c5477da74 417 Gene3D G3DSA:3.30.9.10 134 190 9.9E-15 T 23-04-2016 VV93_RS03680 858133d5c97783504ff38a9c5477da74 417 SUPERFAMILY SSF51905 1 54 6.47E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS03680 858133d5c97783504ff38a9c5477da74 417 SUPERFAMILY SSF51905 360 413 6.47E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS03680 858133d5c97783504ff38a9c5477da74 417 SUPERFAMILY SSF51905 107 270 6.47E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS03680 858133d5c97783504ff38a9c5477da74 417 Pfam PF01266 FAD dependent oxidoreductase 3 397 1.1E-65 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VV93_RS03680 858133d5c97783504ff38a9c5477da74 417 PANTHER PTHR13847:SF148 4 63 4.3E-209 T 23-04-2016 VV93_RS03680 858133d5c97783504ff38a9c5477da74 417 PANTHER PTHR13847:SF148 107 417 4.3E-209 T 23-04-2016 VV93_RS03680 858133d5c97783504ff38a9c5477da74 417 Gene3D G3DSA:3.50.50.60 2 58 5.9E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS03680 858133d5c97783504ff38a9c5477da74 417 Gene3D G3DSA:3.50.50.60 108 130 5.9E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS03680 858133d5c97783504ff38a9c5477da74 417 Gene3D G3DSA:3.50.50.60 191 269 5.9E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS03680 858133d5c97783504ff38a9c5477da74 417 Gene3D G3DSA:3.50.50.60 360 408 5.9E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS03680 858133d5c97783504ff38a9c5477da74 417 PANTHER PTHR13847 4 63 4.3E-209 T 23-04-2016 VV93_RS03680 858133d5c97783504ff38a9c5477da74 417 PANTHER PTHR13847 107 417 4.3E-209 T 23-04-2016 VV93_RS03680 858133d5c97783504ff38a9c5477da74 417 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 46.917 T 23-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 VV93_RS07400 9f7f677998760daecc5b182e25924675 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 2.0E-25 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 VV93_RS07400 9f7f677998760daecc5b182e25924675 269 Gene3D G3DSA:3.40.50.1000 1 75 7.7E-57 T 23-04-2016 IPR023214 HAD-like domain VV93_RS07400 9f7f677998760daecc5b182e25924675 269 Gene3D G3DSA:3.40.50.1000 181 267 7.7E-57 T 23-04-2016 IPR023214 HAD-like domain VV93_RS07400 9f7f677998760daecc5b182e25924675 269 PANTHER PTHR10000 1 268 2.0E-117 T 23-04-2016 VV93_RS07400 9f7f677998760daecc5b182e25924675 269 SUPERFAMILY SSF56784 1 267 5.01E-77 T 23-04-2016 IPR023214 HAD-like domain VV93_RS07400 9f7f677998760daecc5b182e25924675 269 PANTHER PTHR10000:SF29 1 268 2.0E-117 T 23-04-2016 VV93_RS07400 9f7f677998760daecc5b182e25924675 269 Gene3D G3DSA:3.30.1240.10 87 180 1.1E-31 T 23-04-2016 VV93_RS07400 9f7f677998760daecc5b182e25924675 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 23-04-2016 VV93_RS07400 9f7f677998760daecc5b182e25924675 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 23-04-2016 IPR000150 Cof protein GO:0016787 VV93_RS07400 9f7f677998760daecc5b182e25924675 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 1.6E-67 T 23-04-2016 IPR023214 HAD-like domain VV93_RS07400 9f7f677998760daecc5b182e25924675 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 4.5E-62 T 23-04-2016 IPR000150 Cof protein GO:0016787 VV93_RS12910 1ce75f08fdda6c370aef818311248dcc 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 8.0E-31 T 23-04-2016 IPR009491 Protein of unknown function DUF1107 VV93_RS12910 1ce75f08fdda6c370aef818311248dcc 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 3.6E-29 T 23-04-2016 IPR009491 Protein of unknown function DUF1107 VV93_RS12910 1ce75f08fdda6c370aef818311248dcc 68 Gene3D G3DSA:3.30.1910.10 1 65 7.6E-31 T 23-04-2016 VV93_RS12790 b4162f12567cd6edc544d67fe053e061 545 SUPERFAMILY SSF52317 289 538 6.66E-89 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS12790 b4162f12567cd6edc544d67fe053e061 545 Gene3D G3DSA:3.40.50.300 1 280 9.2E-133 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12790 b4162f12567cd6edc544d67fe053e061 545 SUPERFAMILY SSF52540 3 269 1.9E-121 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12790 b4162f12567cd6edc544d67fe053e061 545 Gene3D G3DSA:3.40.50.880 288 539 1.0E-99 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS12790 b4162f12567cd6edc544d67fe053e061 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 3.2E-262 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VV93_RS12790 b4162f12567cd6edc544d67fe053e061 545 PANTHER PTHR11550 1 536 0.0 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VV93_RS12790 b4162f12567cd6edc544d67fe053e061 545 Pfam PF06418 CTP synthase N-terminus 5 265 5.5E-125 T 23-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VV93_RS12790 b4162f12567cd6edc544d67fe053e061 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.404 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VV93_RS12790 b4162f12567cd6edc544d67fe053e061 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 1.5E-64 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VV93_RS15325 0d66923474375e4d7195262e2d0f709e 771 Pfam PF00271 Helicase conserved C-terminal domain 403 510 4.7E-6 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS15325 0d66923474375e4d7195262e2d0f709e 771 Pfam PF04851 Type III restriction enzyme, res subunit 147 320 7.9E-36 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VV93_RS15325 0d66923474375e4d7195262e2d0f709e 771 SUPERFAMILY SSF52540 378 518 3.08E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15325 0d66923474375e4d7195262e2d0f709e 771 SUPERFAMILY SSF52540 163 321 3.08E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15325 0d66923474375e4d7195262e2d0f709e 771 Pfam PF08463 EcoEI R protein C-terminal 607 768 7.0E-23 T 23-04-2016 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 VV93_RS15325 0d66923474375e4d7195262e2d0f709e 771 Gene3D G3DSA:3.40.50.300 146 330 3.9E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15325 0d66923474375e4d7195262e2d0f709e 771 SMART SM00487 145 356 7.3E-16 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV93_RS15325 0d66923474375e4d7195262e2d0f709e 771 PANTHER PTHR30195 3 530 7.4E-66 T 23-04-2016 VV93_RS15325 0d66923474375e4d7195262e2d0f709e 771 PANTHER PTHR30195:SF3 3 530 7.4E-66 T 23-04-2016 VV93_RS15325 0d66923474375e4d7195262e2d0f709e 771 Gene3D G3DSA:3.40.50.300 393 521 1.0E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15325 0d66923474375e4d7195262e2d0f709e 771 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 44 113 4.0E-7 T 23-04-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain VV93_RS03510 600e2825480cd0cd8f87af63cb5b385d 378 SUPERFAMILY SSF51713 3 366 1.96E-164 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VV93_RS03510 600e2825480cd0cd8f87af63cb5b385d 378 Gene3D G3DSA:3.20.20.105 2 369 3.7E-172 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VV93_RS03510 600e2825480cd0cd8f87af63cb5b385d 378 PANTHER PTHR21148 1 370 5.1E-189 T 23-04-2016 VV93_RS03510 600e2825480cd0cd8f87af63cb5b385d 378 PANTHER PTHR21148:SF26 1 370 5.1E-189 T 23-04-2016 VV93_RS03510 600e2825480cd0cd8f87af63cb5b385d 378 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 371 2.3E-187 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VV93_RS03510 600e2825480cd0cd8f87af63cb5b385d 378 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 370 1.3E-178 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VV93_RS03510 600e2825480cd0cd8f87af63cb5b385d 378 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 1.1E-96 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VV93_RS03510 600e2825480cd0cd8f87af63cb5b385d 378 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 361 58.458 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VV93_RS10980 1688dba375e2077d4a5333347c3ce287 89 PIRSF PIRSF004669 1 89 1.9E-30 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VV93_RS10980 1688dba375e2077d4a5333347c3ce287 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.0E-17 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VV93_RS10980 1688dba375e2077d4a5333347c3ce287 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.0E-17 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VV93_RS10980 1688dba375e2077d4a5333347c3ce287 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.0E-17 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VV93_RS10980 1688dba375e2077d4a5333347c3ce287 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 6.9E-33 T 23-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 VV93_RS10980 1688dba375e2077d4a5333347c3ce287 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.6E-28 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VV93_RS10980 1688dba375e2077d4a5333347c3ce287 89 PANTHER PTHR34040 1 89 1.3E-36 T 23-04-2016 VV93_RS10980 1688dba375e2077d4a5333347c3ce287 89 PANTHER PTHR34040:SF2 1 89 1.3E-36 T 23-04-2016 VV93_RS07715 8bdcabb72f5330fcadb9f3c1149196ff 639 SUPERFAMILY SSF48452 262 390 2.69E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS07715 8bdcabb72f5330fcadb9f3c1149196ff 639 SUPERFAMILY SSF55073 481 637 4.0E-38 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS07715 8bdcabb72f5330fcadb9f3c1149196ff 639 SMART SM00267 465 639 7.2E-47 T 23-04-2016 IPR000160 GGDEF domain VV93_RS07715 8bdcabb72f5330fcadb9f3c1149196ff 639 SMART SM00028 315 348 180.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS07715 8bdcabb72f5330fcadb9f3c1149196ff 639 SMART SM00028 153 186 61.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS07715 8bdcabb72f5330fcadb9f3c1149196ff 639 SMART SM00028 275 308 270.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS07715 8bdcabb72f5330fcadb9f3c1149196ff 639 SMART SM00028 193 226 380.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS07715 8bdcabb72f5330fcadb9f3c1149196ff 639 SMART SM00028 355 388 13.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS07715 8bdcabb72f5330fcadb9f3c1149196ff 639 SMART SM00028 113 146 18.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS07715 8bdcabb72f5330fcadb9f3c1149196ff 639 Gene3D G3DSA:3.30.70.270 478 638 1.1E-44 T 23-04-2016 VV93_RS07715 8bdcabb72f5330fcadb9f3c1149196ff 639 PANTHER PTHR10799 509 634 8.1E-16 T 23-04-2016 VV93_RS07715 8bdcabb72f5330fcadb9f3c1149196ff 639 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 472 638 1.6E-45 T 23-04-2016 IPR000160 GGDEF domain VV93_RS07715 8bdcabb72f5330fcadb9f3c1149196ff 639 Pfam PF00990 Diguanylate cyclase, GGDEF domain 477 634 5.3E-39 T 23-04-2016 IPR000160 GGDEF domain VV93_RS07715 8bdcabb72f5330fcadb9f3c1149196ff 639 PANTHER PTHR10799:SF710 509 634 8.1E-16 T 23-04-2016 VV93_RS07715 8bdcabb72f5330fcadb9f3c1149196ff 639 SUPERFAMILY SSF48452 112 236 6.42E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS07715 8bdcabb72f5330fcadb9f3c1149196ff 639 Gene3D G3DSA:1.25.40.10 274 389 6.3E-22 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS07715 8bdcabb72f5330fcadb9f3c1149196ff 639 Gene3D G3DSA:1.25.40.10 109 229 6.3E-22 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS08705 416d908bb355502545861efe944e55bc 406 Gene3D G3DSA:3.20.20.140 71 344 2.0E-37 T 23-04-2016 VV93_RS08705 416d908bb355502545861efe944e55bc 406 PANTHER PTHR22642 44 393 1.3E-140 T 23-04-2016 VV93_RS08705 416d908bb355502545861efe944e55bc 406 Pfam PF01979 Amidohydrolase family 56 373 4.7E-13 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 VV93_RS08705 416d908bb355502545861efe944e55bc 406 TIGRFAM TIGR01224 hutI: imidazolonepropionase 26 396 2.3E-152 T 23-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VV93_RS08705 416d908bb355502545861efe944e55bc 406 PANTHER PTHR22642:SF1 44 393 1.3E-140 T 23-04-2016 VV93_RS08705 416d908bb355502545861efe944e55bc 406 SUPERFAMILY SSF51338 1 59 2.16E-26 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VV93_RS08705 416d908bb355502545861efe944e55bc 406 SUPERFAMILY SSF51338 360 397 2.16E-26 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VV93_RS08705 416d908bb355502545861efe944e55bc 406 Gene3D G3DSA:2.30.40.10 1 70 1.1E-16 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VV93_RS08705 416d908bb355502545861efe944e55bc 406 Gene3D G3DSA:2.30.40.10 345 379 2.6E-7 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VV93_RS08705 416d908bb355502545861efe944e55bc 406 SUPERFAMILY SSF51556 59 358 1.26E-80 T 23-04-2016 IPR032466 Metal-dependent hydrolase VV93_RS08705 416d908bb355502545861efe944e55bc 406 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 398 40.771 T 23-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 SMART SM00388 214 279 1.4E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 Gene3D G3DSA:3.30.565.10 265 438 1.6E-47 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 Gene3D G3DSA:1.10.287.130 206 264 2.7E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 SMART SM00387 326 437 9.5E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 PANTHER PTHR24423:SF491 212 570 1.1E-135 T 23-04-2016 VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 PANTHER PTHR24423:SF491 25 41 1.1E-135 T 23-04-2016 VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 Gene3D G3DSA:3.40.50.2300 454 573 4.1E-39 T 23-04-2016 VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 PANTHER PTHR24423 212 570 1.1E-135 T 23-04-2016 VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 PANTHER PTHR24423 25 41 1.1E-135 T 23-04-2016 VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 279 1.1E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 435 1.0E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 SUPERFAMILY SSF47384 199 280 2.55E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 SUPERFAMILY SSF55874 268 436 4.98E-47 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 Pfam PF00072 Response regulator receiver domain 458 570 3.8E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 SMART SM00448 456 569 2.8E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 SUPERFAMILY SSF52172 456 573 1.18E-35 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 6.0E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 6.0E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 6.0E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS07945 bc286a59507b3c5d9acacbdf80746ff2 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 6.0E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS01435 fb033baecd821f341bf9f8d6b9c05c26 312 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 7 305 1.8E-129 T 23-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 VV93_RS01435 fb033baecd821f341bf9f8d6b9c05c26 312 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 7 298 1.4E-75 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VV93_RS01435 fb033baecd821f341bf9f8d6b9c05c26 312 PANTHER PTHR30606:SF5 4 307 4.6E-140 T 23-04-2016 VV93_RS01435 fb033baecd821f341bf9f8d6b9c05c26 312 PANTHER PTHR30606 4 307 4.6E-140 T 23-04-2016 VV93_RS01435 fb033baecd821f341bf9f8d6b9c05c26 312 PIRSF PIRSF026649 4 307 3.4E-78 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VV93_RS01435 fb033baecd821f341bf9f8d6b9c05c26 312 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 309 46.801 T 23-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 VV93_RS06540 f129e09dfe8af18cac1852d9aee2b82f 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 23-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VV93_RS06540 f129e09dfe8af18cac1852d9aee2b82f 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.835 T 23-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VV93_RS06540 f129e09dfe8af18cac1852d9aee2b82f 192 Pfam PF00265 Thymidine kinase 2 186 3.0E-59 T 23-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VV93_RS06540 f129e09dfe8af18cac1852d9aee2b82f 192 SUPERFAMILY SSF52540 2 141 2.09E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06540 f129e09dfe8af18cac1852d9aee2b82f 192 Gene3D G3DSA:3.30.60.20 142 189 3.9E-19 T 23-04-2016 VV93_RS06540 f129e09dfe8af18cac1852d9aee2b82f 192 Gene3D G3DSA:3.40.50.300 14 114 0.001 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06540 f129e09dfe8af18cac1852d9aee2b82f 192 SUPERFAMILY SSF57716 142 190 7.6E-17 T 23-04-2016 VV93_RS06540 f129e09dfe8af18cac1852d9aee2b82f 192 PANTHER PTHR11441 1 190 3.3E-80 T 23-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VV93_RS06540 f129e09dfe8af18cac1852d9aee2b82f 192 PIRSF PIRSF035805 1 192 4.2E-57 T 23-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VV93_RS00425 e067f4b14e564076a0cdfeca1b7d312d 104 Hamap MF_00142 Protein CyaY [cyaY]. 1 103 27.961 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VV93_RS00425 e067f4b14e564076a0cdfeca1b7d312d 104 SMART SM01219 1 104 1.3E-54 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VV93_RS00425 e067f4b14e564076a0cdfeca1b7d312d 104 Pfam PF01491 Frataxin-like domain 1 100 1.0E-29 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VV93_RS00425 e067f4b14e564076a0cdfeca1b7d312d 104 Gene3D G3DSA:3.30.920.10 1 103 2.7E-34 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VV93_RS00425 e067f4b14e564076a0cdfeca1b7d312d 104 PANTHER PTHR16821 1 103 1.4E-33 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VV93_RS00425 e067f4b14e564076a0cdfeca1b7d312d 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 4.7E-43 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VV93_RS00425 e067f4b14e564076a0cdfeca1b7d312d 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 23-04-2016 IPR020895 Frataxin conserved site VV93_RS00425 e067f4b14e564076a0cdfeca1b7d312d 104 SUPERFAMILY SSF55387 1 103 3.66E-39 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VV93_RS04255 370679795b467abc64e2f5fb06a1f824 630 SUPERFAMILY SSF56519 58 254 5.49E-56 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VV93_RS04255 370679795b467abc64e2f5fb06a1f824 630 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 617 3.9E-73 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VV93_RS04255 370679795b467abc64e2f5fb06a1f824 630 SUPERFAMILY SSF56601 256 620 2.18E-94 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS04255 370679795b467abc64e2f5fb06a1f824 630 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 241 7.4E-51 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VV93_RS04255 370679795b467abc64e2f5fb06a1f824 630 PANTHER PTHR30627:SF2 7 629 1.7E-263 T 23-04-2016 VV93_RS04255 370679795b467abc64e2f5fb06a1f824 630 PANTHER PTHR30627 7 629 1.7E-263 T 23-04-2016 VV93_RS04255 370679795b467abc64e2f5fb06a1f824 630 Gene3D G3DSA:3.40.710.10 256 623 2.2E-102 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS04255 370679795b467abc64e2f5fb06a1f824 630 Gene3D G3DSA:3.90.1310.10 132 254 1.7E-39 T 23-04-2016 VV93_RS04255 370679795b467abc64e2f5fb06a1f824 630 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 22 620 1.6E-239 T 23-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 VV93_RS00305 8accda311ac10135670e67326c2073f8 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS00305 8accda311ac10135670e67326c2073f8 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 596 1.7E-248 T 23-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 VV93_RS00305 8accda311ac10135670e67326c2073f8 598 SUPERFAMILY SSF52016 418 596 1.65E-51 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VV93_RS00305 8accda311ac10135670e67326c2073f8 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS00305 8accda311ac10135670e67326c2073f8 598 PANTHER PTHR21000 3 597 0.0 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS00305 8accda311ac10135670e67326c2073f8 598 SUPERFAMILY SSF143975 3 408 4.18E-130 T 23-04-2016 VV93_RS00305 8accda311ac10135670e67326c2073f8 598 Pfam PF00920 Dehydratase family 68 594 1.7E-145 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS00305 8accda311ac10135670e67326c2073f8 598 PANTHER PTHR21000:SF9 3 597 0.0 T 23-04-2016 VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 Pfam PF14841 FliG middle domain 134 206 2.4E-25 T 23-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 PANTHER PTHR30534:SF0 11 351 2.5E-109 T 23-04-2016 VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 SUPERFAMILY SSF48029 133 344 8.63E-67 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 Gene3D G3DSA:1.10.220.30 124 208 1.3E-30 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 Gene3D G3DSA:1.10.220.30 28 93 3.7E-15 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 SUPERFAMILY SSF48029 25 136 4.58E-20 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 PANTHER PTHR30534 11 351 2.5E-109 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 Pfam PF01706 FliG C-terminal domain 236 343 1.7E-41 T 23-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 PIRSF PIRSF003161 18 351 2.2E-113 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 Pfam PF14842 FliG N-terminal domain 24 124 3.2E-27 T 23-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 287 7.4E-60 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 7.4E-60 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 133 156 7.4E-60 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 291 317 7.4E-60 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 53 79 7.4E-60 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 214 239 7.4E-60 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 24 40 7.4E-60 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 Gene3D G3DSA:1.10.220.30 214 349 1.9E-42 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VV93_RS11030 75f594f89c55c2e6c82ca1df568fdd32 351 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 20 349 2.9E-96 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV93_RS14370 26459a15929983461dd489a01e5d80d4 323 PANTHER PTHR22594:SF7 10 319 3.2E-142 T 23-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VV93_RS14370 26459a15929983461dd489a01e5d80d4 323 SUPERFAMILY SSF55681 10 320 7.57E-81 T 23-04-2016 VV93_RS14370 26459a15929983461dd489a01e5d80d4 323 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 318 5.2E-127 T 23-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VV93_RS14370 26459a15929983461dd489a01e5d80d4 323 Gene3D G3DSA:3.30.930.10 12 319 1.3E-68 T 23-04-2016 VV93_RS14370 26459a15929983461dd489a01e5d80d4 323 Pfam PF00152 tRNA synthetases class II (D, K and N) 11 319 8.0E-43 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS14370 26459a15929983461dd489a01e5d80d4 323 PANTHER PTHR22594 10 319 3.2E-142 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS14370 26459a15929983461dd489a01e5d80d4 323 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 323 52.657 T 23-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VV93_RS07515 4a14988f440e0da0bc4660d19180dac9 211 PIRSF PIRSF006324 1 210 3.9E-56 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VV93_RS07515 4a14988f440e0da0bc4660d19180dac9 211 PANTHER PTHR30086 1 210 1.1E-92 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VV93_RS07515 4a14988f440e0da0bc4660d19180dac9 211 Pfam PF01810 LysE type translocator 15 208 9.5E-32 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VV93_RS07515 4a14988f440e0da0bc4660d19180dac9 211 PANTHER PTHR30086:SF2 1 210 1.1E-92 T 23-04-2016 VV93_RS06025 a712626be10fbb20ed4459aadde61a9c 195 Gene3D G3DSA:1.10.3820.10 28 193 5.1E-19 T 23-04-2016 VV93_RS06025 a712626be10fbb20ed4459aadde61a9c 195 SUPERFAMILY SSF48695 14 189 1.11E-28 T 23-04-2016 IPR011031 Multihaem cytochrome VV93_RS06025 a712626be10fbb20ed4459aadde61a9c 195 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 43 189 6.6E-66 T 23-04-2016 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 UniPathway: UPA00045 VV93_RS06025 a712626be10fbb20ed4459aadde61a9c 195 PANTHER PTHR35038 7 187 4.5E-20 T 23-04-2016 VV93_RS06025 a712626be10fbb20ed4459aadde61a9c 195 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 152 187 5.5E-5 T 23-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 VV93_RS06025 a712626be10fbb20ed4459aadde61a9c 195 Pfam PF13435 Cytochrome c554 and c-prime 35 88 0.0064 T 23-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 VV93_RS13170 aeb77c1b1ae6d14857130677d586be9d 241 PANTHER PTHR32145 1 237 1.6E-68 T 23-04-2016 VV93_RS13170 aeb77c1b1ae6d14857130677d586be9d 241 SMART SM00849 29 218 3.8E-12 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS13170 aeb77c1b1ae6d14857130677d586be9d 241 Gene3D G3DSA:3.60.15.10 12 237 1.5E-47 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS13170 aeb77c1b1ae6d14857130677d586be9d 241 Pfam PF00753 Metallo-beta-lactamase superfamily 30 218 3.1E-13 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS13170 aeb77c1b1ae6d14857130677d586be9d 241 SUPERFAMILY SSF56281 16 239 1.18E-32 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS13170 aeb77c1b1ae6d14857130677d586be9d 241 PANTHER PTHR32145:SF7 1 237 1.6E-68 T 23-04-2016 VV93_RS00035 f39290b9234703ecc0e5352e9ea4f390 418 Gene3D G3DSA:3.90.1150.10 267 409 1.1E-15 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS00035 f39290b9234703ecc0e5352e9ea4f390 418 PANTHER PTHR11751:SF419 11 416 1.9E-175 T 23-04-2016 VV93_RS00035 f39290b9234703ecc0e5352e9ea4f390 418 PANTHER PTHR11751 11 416 1.9E-175 T 23-04-2016 VV93_RS00035 f39290b9234703ecc0e5352e9ea4f390 418 Pfam PF00155 Aminotransferase class I and II 67 399 4.0E-26 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV93_RS00035 f39290b9234703ecc0e5352e9ea4f390 418 Gene3D G3DSA:3.40.640.10 52 266 1.8E-41 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS00035 f39290b9234703ecc0e5352e9ea4f390 418 SUPERFAMILY SSF53383 13 410 7.43E-60 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS01485 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 67 2.5E-20 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VV93_RS01485 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 PANTHER PTHR21342:SF1 1 161 1.1E-77 T 23-04-2016 VV93_RS01485 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 9 161 1.3E-59 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VV93_RS01485 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 Pfam PF01467 Cytidylyltransferase-like 10 138 1.1E-19 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VV93_RS01485 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 Gene3D G3DSA:3.40.50.620 8 162 1.5E-55 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS01485 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 PANTHER PTHR21342 1 161 1.1E-77 T 23-04-2016 VV93_RS01485 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 7.0E-50 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VV93_RS01485 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 7.0E-50 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VV93_RS01485 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 7.0E-50 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VV93_RS01485 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 7.0E-50 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VV93_RS01485 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 7.0E-50 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VV93_RS01485 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 35.682 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VV93_RS01485 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 SUPERFAMILY SSF52374 8 162 9.65E-46 T 23-04-2016 VV93_RS04405 b296dfb4f4d0aaf11e871dcbd2699f5e 314 Gene3D G3DSA:3.40.50.2020 160 286 9.2E-53 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like VV93_RS04405 b296dfb4f4d0aaf11e871dcbd2699f5e 314 Gene3D G3DSA:3.40.50.2020 2 159 9.1E-73 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like VV93_RS04405 b296dfb4f4d0aaf11e871dcbd2699f5e 314 SMART SM01400 4 121 7.0E-78 T 23-04-2016 VV93_RS04405 b296dfb4f4d0aaf11e871dcbd2699f5e 314 SUPERFAMILY SSF53271 69 306 8.14E-67 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like VV93_RS04405 b296dfb4f4d0aaf11e871dcbd2699f5e 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 23-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 VV93_RS04405 b296dfb4f4d0aaf11e871dcbd2699f5e 314 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.586 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VV93_RS04405 b296dfb4f4d0aaf11e871dcbd2699f5e 314 PANTHER PTHR10210:SF41 2 314 4.2E-187 T 23-04-2016 VV93_RS04405 b296dfb4f4d0aaf11e871dcbd2699f5e 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 5.4E-125 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VV93_RS04405 b296dfb4f4d0aaf11e871dcbd2699f5e 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.3E-50 T 23-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VV93_RS04405 b296dfb4f4d0aaf11e871dcbd2699f5e 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 2.6E-30 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VV93_RS04405 b296dfb4f4d0aaf11e871dcbd2699f5e 314 PANTHER PTHR10210 2 314 4.2E-187 T 23-04-2016 VV93_RS06910 af3897bb5d9dcc6482573ab0cabcee00 560 SUPERFAMILY SSF116726 294 377 2.35E-10 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS06910 af3897bb5d9dcc6482573ab0cabcee00 560 PANTHER PTHR30445 3 559 0.0 T 23-04-2016 VV93_RS06910 af3897bb5d9dcc6482573ab0cabcee00 560 PANTHER PTHR30445:SF4 3 559 0.0 T 23-04-2016 VV93_RS06910 af3897bb5d9dcc6482573ab0cabcee00 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 544 7.0E-38 T 23-04-2016 IPR006512 YidE/YbjL duplication VV93_RS06910 af3897bb5d9dcc6482573ab0cabcee00 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 171 1.2E-27 T 23-04-2016 IPR006512 YidE/YbjL duplication VV93_RS06910 af3897bb5d9dcc6482573ab0cabcee00 560 Gene3D G3DSA:3.30.70.1450 308 377 4.4E-7 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS06910 af3897bb5d9dcc6482573ab0cabcee00 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 1.6E-42 T 23-04-2016 IPR006512 YidE/YbjL duplication VV93_RS06910 af3897bb5d9dcc6482573ab0cabcee00 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 2.5E-35 T 23-04-2016 IPR006512 YidE/YbjL duplication VV93_RS06910 af3897bb5d9dcc6482573ab0cabcee00 560 SUPERFAMILY SSF116726 230 285 5.75E-10 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS06910 af3897bb5d9dcc6482573ab0cabcee00 560 Gene3D G3DSA:3.30.70.1450 232 286 5.1E-8 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS06910 af3897bb5d9dcc6482573ab0cabcee00 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 57.658 T 23-04-2016 IPR023017 Transport protein YbjL, putative VV93_RS06910 af3897bb5d9dcc6482573ab0cabcee00 560 Pfam PF02080 TrkA-C domain 309 374 1.9E-8 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS06910 af3897bb5d9dcc6482573ab0cabcee00 560 Pfam PF02080 TrkA-C domain 232 281 5.5E-8 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS20670 07e3ff8e501278f2849c0050e0d2b09d 505 PANTHER PTHR10322 42 503 1.2E-119 T 23-04-2016 VV93_RS20670 07e3ff8e501278f2849c0050e0d2b09d 505 SUPERFAMILY SSF56672 279 505 1.72E-70 T 23-04-2016 VV93_RS20670 07e3ff8e501278f2849c0050e0d2b09d 505 ProSitePatterns PS00116 DNA polymerase family B signature. 440 448 - T 23-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS20670 07e3ff8e501278f2849c0050e0d2b09d 505 SMART SM00486 47 452 7.0E-60 T 23-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS20670 07e3ff8e501278f2849c0050e0d2b09d 505 SUPERFAMILY SSF53098 1 283 5.31E-68 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS20670 07e3ff8e501278f2849c0050e0d2b09d 505 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 309 322 4.9E-11 T 23-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS20670 07e3ff8e501278f2849c0050e0d2b09d 505 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 386 398 4.9E-11 T 23-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS20670 07e3ff8e501278f2849c0050e0d2b09d 505 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 438 446 4.9E-11 T 23-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS20670 07e3ff8e501278f2849c0050e0d2b09d 505 Gene3D G3DSA:3.90.1600.10 306 325 5.5E-10 T 23-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS20670 07e3ff8e501278f2849c0050e0d2b09d 505 Gene3D G3DSA:3.90.1600.10 409 456 5.5E-10 T 23-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS20670 07e3ff8e501278f2849c0050e0d2b09d 505 Gene3D G3DSA:3.30.420.10 47 260 7.9E-38 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS20670 07e3ff8e501278f2849c0050e0d2b09d 505 Pfam PF03104 DNA polymerase family B, exonuclease domain 76 190 5.0E-15 T 23-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS20670 07e3ff8e501278f2849c0050e0d2b09d 505 Pfam PF00136 DNA polymerase family B 270 501 1.3E-29 T 23-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS05300 e264f2832744d3b9caceddcfd34a7c5d 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 47.094 T 23-04-2016 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 VV93_RS05300 e264f2832744d3b9caceddcfd34a7c5d 194 SMART SM00471 26 151 2.9E-8 T 23-04-2016 IPR003607 HD/PDEase domain VV93_RS05300 e264f2832744d3b9caceddcfd34a7c5d 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 176 6.0E-41 T 23-04-2016 VV93_RS05300 e264f2832744d3b9caceddcfd34a7c5d 194 SUPERFAMILY SSF109604 4 193 5.65E-43 T 23-04-2016 VV93_RS05300 e264f2832744d3b9caceddcfd34a7c5d 194 Gene3D G3DSA:1.10.3210.10 3 193 2.2E-48 T 23-04-2016 IPR006674 HD domain VV93_RS05300 e264f2832744d3b9caceddcfd34a7c5d 194 Pfam PF13023 HD domain 11 158 8.0E-18 T 23-04-2016 IPR006674 HD domain VV93_RS05300 e264f2832744d3b9caceddcfd34a7c5d 194 PANTHER PTHR11845 4 190 2.2E-34 T 23-04-2016 VV93_RS00285 2d9f59987442ac25f2db21ae407f7bec 444 SMART SM00220 78 325 7.9E-26 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VV93_RS00285 2d9f59987442ac25f2db21ae407f7bec 444 PANTHER PTHR24362 394 429 3.9E-47 T 23-04-2016 VV93_RS00285 2d9f59987442ac25f2db21ae407f7bec 444 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 84 109 - T 23-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 VV93_RS00285 2d9f59987442ac25f2db21ae407f7bec 444 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 197 209 - T 23-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VV93_RS00285 2d9f59987442ac25f2db21ae407f7bec 444 PANTHER PTHR24362:SF160 74 278 3.9E-47 T 23-04-2016 VV93_RS00285 2d9f59987442ac25f2db21ae407f7bec 444 PANTHER PTHR24362:SF160 394 429 3.9E-47 T 23-04-2016 VV93_RS00285 2d9f59987442ac25f2db21ae407f7bec 444 PANTHER PTHR24362 74 278 3.9E-47 T 23-04-2016 VV93_RS00285 2d9f59987442ac25f2db21ae407f7bec 444 SUPERFAMILY SSF56112 72 273 5.4E-51 T 23-04-2016 IPR011009 Protein kinase-like domain VV93_RS00285 2d9f59987442ac25f2db21ae407f7bec 444 Gene3D G3DSA:1.10.510.10 144 272 6.8E-33 T 23-04-2016 VV93_RS00285 2d9f59987442ac25f2db21ae407f7bec 444 Pfam PF00069 Protein kinase domain 78 272 3.8E-37 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VV93_RS00285 2d9f59987442ac25f2db21ae407f7bec 444 Gene3D G3DSA:3.30.200.20 72 143 2.3E-18 T 23-04-2016 VV93_RS14905 1bb8da01e1708445f97abe96640d4f9b 595 Gene3D G3DSA:3.40.350.10 6 131 3.2E-21 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VV93_RS14905 1bb8da01e1708445f97abe96640d4f9b 595 Pfam PF16188 C-terminal region of peptidase_M24 534 593 2.6E-22 T 23-04-2016 IPR032416 Peptidase M24, C-terminal domain VV93_RS14905 1bb8da01e1708445f97abe96640d4f9b 595 SUPERFAMILY SSF53092 7 130 7.15E-19 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal VV93_RS14905 1bb8da01e1708445f97abe96640d4f9b 595 PANTHER PTHR10804 282 591 5.0E-230 T 23-04-2016 VV93_RS14905 1bb8da01e1708445f97abe96640d4f9b 595 PANTHER PTHR10804 7 180 5.0E-230 T 23-04-2016 VV93_RS14905 1bb8da01e1708445f97abe96640d4f9b 595 SUPERFAMILY SSF55920 303 559 2.75E-55 T 23-04-2016 IPR000994 Peptidase M24, structural domain VV93_RS14905 1bb8da01e1708445f97abe96640d4f9b 595 PANTHER PTHR10804:SF105 282 591 5.0E-230 T 23-04-2016 VV93_RS14905 1bb8da01e1708445f97abe96640d4f9b 595 PANTHER PTHR10804:SF105 7 180 5.0E-230 T 23-04-2016 VV93_RS14905 1bb8da01e1708445f97abe96640d4f9b 595 Gene3D G3DSA:3.90.230.10 301 559 2.4E-59 T 23-04-2016 IPR000994 Peptidase M24, structural domain VV93_RS14905 1bb8da01e1708445f97abe96640d4f9b 595 Pfam PF00557 Metallopeptidase family M24 310 523 7.3E-44 T 23-04-2016 IPR000994 Peptidase M24, structural domain VV93_RS14905 1bb8da01e1708445f97abe96640d4f9b 595 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 134 1.6E-18 T 23-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 VV93_RS14905 1bb8da01e1708445f97abe96640d4f9b 595 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 7.4E-32 T 23-04-2016 VV93_RS09190 fa9eb61698c43be25937c3738ddd8a7b 515 Pfam PF01235 Sodium:alanine symporter family 96 500 9.4E-134 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS09190 fa9eb61698c43be25937c3738ddd8a7b 515 PRINTS PR00175 Sodium/alanine symporter signature 237 255 6.2E-48 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS09190 fa9eb61698c43be25937c3738ddd8a7b 515 PRINTS PR00175 Sodium/alanine symporter signature 461 481 6.2E-48 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS09190 fa9eb61698c43be25937c3738ddd8a7b 515 PRINTS PR00175 Sodium/alanine symporter signature 265 284 6.2E-48 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS09190 fa9eb61698c43be25937c3738ddd8a7b 515 PRINTS PR00175 Sodium/alanine symporter signature 132 154 6.2E-48 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS09190 fa9eb61698c43be25937c3738ddd8a7b 515 PRINTS PR00175 Sodium/alanine symporter signature 355 373 6.2E-48 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS09190 fa9eb61698c43be25937c3738ddd8a7b 515 PRINTS PR00175 Sodium/alanine symporter signature 400 422 6.2E-48 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS09190 fa9eb61698c43be25937c3738ddd8a7b 515 PANTHER PTHR30330 56 497 8.9E-183 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS09190 fa9eb61698c43be25937c3738ddd8a7b 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 58 492 2.3E-122 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS09190 fa9eb61698c43be25937c3738ddd8a7b 515 PANTHER PTHR30330:SF3 56 497 8.9E-183 T 23-04-2016 VV93_RS04775 d668fa1649cc971ad5e55c01d2c6bf82 462 Gene3D G3DSA:1.20.1250.20 14 211 7.5E-20 T 23-04-2016 VV93_RS04775 d668fa1649cc971ad5e55c01d2c6bf82 462 Gene3D G3DSA:1.20.1250.20 237 435 5.4E-8 T 23-04-2016 VV93_RS04775 d668fa1649cc971ad5e55c01d2c6bf82 462 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 23-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS04775 d668fa1649cc971ad5e55c01d2c6bf82 462 PANTHER PTHR11654 2 462 1.0E-177 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS04775 d668fa1649cc971ad5e55c01d2c6bf82 462 Pfam PF00854 POT family 85 197 2.0E-28 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS04775 d668fa1649cc971ad5e55c01d2c6bf82 462 Pfam PF00854 POT family 228 405 4.8E-32 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS04775 d668fa1649cc971ad5e55c01d2c6bf82 462 SUPERFAMILY SSF103473 8 436 2.49E-41 T 23-04-2016 IPR020846 Major facilitator superfamily domain VV93_RS04775 d668fa1649cc971ad5e55c01d2c6bf82 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 224 438 8.7E-47 T 23-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 VV93_RS04775 d668fa1649cc971ad5e55c01d2c6bf82 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 215 2.2E-58 T 23-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 VV93_RS04775 d668fa1649cc971ad5e55c01d2c6bf82 462 PANTHER PTHR11654:SF119 2 462 1.0E-177 T 23-04-2016 VV93_RS00765 b668fdf0a9a542f6c7b08f611d62576c 247 SMART SM00849 13 165 2.3E-20 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS00765 b668fdf0a9a542f6c7b08f611d62576c 247 PANTHER PTHR11935 2 247 3.9E-62 T 23-04-2016 VV93_RS00765 b668fdf0a9a542f6c7b08f611d62576c 247 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 9 244 4.0E-69 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VV93_RS00765 b668fdf0a9a542f6c7b08f611d62576c 247 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 244 6.5E-19 T 23-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VV93_RS00765 b668fdf0a9a542f6c7b08f611d62576c 247 SUPERFAMILY SSF56281 11 244 4.33E-49 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS00765 b668fdf0a9a542f6c7b08f611d62576c 247 Gene3D G3DSA:3.60.15.10 10 245 3.0E-60 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS00765 b668fdf0a9a542f6c7b08f611d62576c 247 PANTHER PTHR11935:SF7 2 247 3.9E-62 T 23-04-2016 VV93_RS00765 b668fdf0a9a542f6c7b08f611d62576c 247 Pfam PF00753 Metallo-beta-lactamase superfamily 15 165 2.1E-13 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS00765 b668fdf0a9a542f6c7b08f611d62576c 247 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 3 244 36.735 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VV93_RS00755 147c52a2bed709bc398d63ef4236a366 62 Pfam PF13737 Transposase DDE domain 20 54 2.4E-10 T 23-04-2016 IPR025668 Transposase DDE domain VV93_RS00755 147c52a2bed709bc398d63ef4236a366 62 PANTHER PTHR34631:SF2 3 54 2.7E-19 T 23-04-2016 VV93_RS00755 147c52a2bed709bc398d63ef4236a366 62 PANTHER PTHR34631 3 54 2.7E-19 T 23-04-2016 VV93_RS15195 006d3fe3b073c67f6a283fc12f5fc6e8 467 Gene3D G3DSA:1.10.1140.10 352 467 1.2E-51 T 23-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS15195 006d3fe3b073c67f6a283fc12f5fc6e8 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 8.4E-61 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS15195 006d3fe3b073c67f6a283fc12f5fc6e8 467 Gene3D G3DSA:3.40.50.300 76 350 4.4E-106 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15195 006d3fe3b073c67f6a283fc12f5fc6e8 467 SUPERFAMILY SSF50615 1 75 1.91E-25 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS15195 006d3fe3b073c67f6a283fc12f5fc6e8 467 SUPERFAMILY SSF47917 352 466 1.73E-50 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS15195 006d3fe3b073c67f6a283fc12f5fc6e8 467 SUPERFAMILY SSF52540 77 355 8.49E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15195 006d3fe3b073c67f6a283fc12f5fc6e8 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS15195 006d3fe3b073c67f6a283fc12f5fc6e8 467 SMART SM00382 142 334 5.5E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS15195 006d3fe3b073c67f6a283fc12f5fc6e8 467 Gene3D G3DSA:2.40.10.170 2 75 6.1E-31 T 23-04-2016 VV93_RS15195 006d3fe3b073c67f6a283fc12f5fc6e8 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 9.6E-21 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS15195 006d3fe3b073c67f6a283fc12f5fc6e8 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 2.3E-249 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS15195 006d3fe3b073c67f6a283fc12f5fc6e8 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 56.205 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS15195 006d3fe3b073c67f6a283fc12f5fc6e8 467 PANTHER PTHR15184 1 467 0.0 T 23-04-2016 VV93_RS15195 006d3fe3b073c67f6a283fc12f5fc6e8 467 PANTHER PTHR15184:SF44 1 467 0.0 T 23-04-2016 VV93_RS06215 40279ae3a7f65c301d0a2cfae81c0c02 313 PIRSF PIRSF002867 1 312 5.5E-104 T 23-04-2016 IPR024181 Chemotaxis response regulator CheV VV93_RS06215 40279ae3a7f65c301d0a2cfae81c0c02 313 SUPERFAMILY SSF50341 16 161 1.57E-33 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VV93_RS06215 40279ae3a7f65c301d0a2cfae81c0c02 313 PANTHER PTHR22617:SF37 1 174 2.4E-83 T 23-04-2016 VV93_RS06215 40279ae3a7f65c301d0a2cfae81c0c02 313 PANTHER PTHR22617 1 174 2.4E-83 T 23-04-2016 VV93_RS06215 40279ae3a7f65c301d0a2cfae81c0c02 313 SMART SM00260 17 158 3.1E-30 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VV93_RS06215 40279ae3a7f65c301d0a2cfae81c0c02 313 SMART SM00448 184 305 2.2E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS06215 40279ae3a7f65c301d0a2cfae81c0c02 313 Pfam PF00072 Response regulator receiver domain 186 303 1.1E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS06215 40279ae3a7f65c301d0a2cfae81c0c02 313 SUPERFAMILY SSF52172 183 309 6.69E-22 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS06215 40279ae3a7f65c301d0a2cfae81c0c02 313 Gene3D G3DSA:2.40.50.180 60 98 1.5E-5 T 23-04-2016 VV93_RS06215 40279ae3a7f65c301d0a2cfae81c0c02 313 Gene3D G3DSA:2.30.30.40 99 137 3.0E-4 T 23-04-2016 VV93_RS06215 40279ae3a7f65c301d0a2cfae81c0c02 313 Gene3D G3DSA:3.40.50.2300 183 310 8.5E-24 T 23-04-2016 VV93_RS06215 40279ae3a7f65c301d0a2cfae81c0c02 313 Pfam PF01584 CheW-like domain 21 160 1.5E-35 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VV93_RS11395 bdfb9564d09c0881ea0ac49a87dc6539 436 Gene3D G3DSA:3.40.50.620 14 181 2.0E-17 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS11395 bdfb9564d09c0881ea0ac49a87dc6539 436 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 309 23.045 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VV93_RS11395 bdfb9564d09c0881ea0ac49a87dc6539 436 SUPERFAMILY SSF52402 15 233 5.19E-62 T 23-04-2016 VV93_RS11395 bdfb9564d09c0881ea0ac49a87dc6539 436 Pfam PF11734 TilS substrate C-terminal domain 367 432 9.5E-23 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VV93_RS11395 bdfb9564d09c0881ea0ac49a87dc6539 436 SMART SM00977 365 434 8.4E-23 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VV93_RS11395 bdfb9564d09c0881ea0ac49a87dc6539 436 Pfam PF09179 TilS substrate binding domain 248 315 1.0E-14 T 23-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VV93_RS11395 bdfb9564d09c0881ea0ac49a87dc6539 436 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 203 5.6E-55 T 23-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VV93_RS11395 bdfb9564d09c0881ea0ac49a87dc6539 436 PANTHER PTHR11807:SF2 1 429 1.4E-85 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VV93_RS11395 bdfb9564d09c0881ea0ac49a87dc6539 436 SUPERFAMILY SSF56037 323 435 4.97E-29 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VV93_RS11395 bdfb9564d09c0881ea0ac49a87dc6539 436 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 365 411 7.4E-18 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VV93_RS11395 bdfb9564d09c0881ea0ac49a87dc6539 436 Pfam PF01171 PP-loop family 22 199 5.4E-59 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal VV93_RS11395 bdfb9564d09c0881ea0ac49a87dc6539 436 PANTHER PTHR11807 1 429 1.4E-85 T 23-04-2016 VV93_RS11395 bdfb9564d09c0881ea0ac49a87dc6539 436 SUPERFAMILY SSF82829 238 319 1.28E-22 T 23-04-2016 VV93_RS01925 4620ebc6b5a5872619646f6a3aaac60a 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS01925 4620ebc6b5a5872619646f6a3aaac60a 330 SUPERFAMILY SSF55257 7 53 3.53E-30 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS01925 4620ebc6b5a5872619646f6a3aaac60a 330 SUPERFAMILY SSF55257 180 234 3.53E-30 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS01925 4620ebc6b5a5872619646f6a3aaac60a 330 SMART SM00662 23 235 1.0E-103 T 23-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS01925 4620ebc6b5a5872619646f6a3aaac60a 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.681 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS01925 4620ebc6b5a5872619646f6a3aaac60a 330 Gene3D G3DSA:2.170.120.12 58 178 9.2E-41 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS01925 4620ebc6b5a5872619646f6a3aaac60a 330 PANTHER PTHR32108:SF0 1 330 8.1E-154 T 23-04-2016 VV93_RS01925 4620ebc6b5a5872619646f6a3aaac60a 330 Gene3D G3DSA:1.10.150.20 245 329 7.2E-38 T 23-04-2016 VV93_RS01925 4620ebc6b5a5872619646f6a3aaac60a 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS01925 4620ebc6b5a5872619646f6a3aaac60a 330 PANTHER PTHR32108 1 330 8.1E-154 T 23-04-2016 VV93_RS01925 4620ebc6b5a5872619646f6a3aaac60a 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 23-04-2016 VV93_RS01925 4620ebc6b5a5872619646f6a3aaac60a 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 4.2E-24 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS01925 4620ebc6b5a5872619646f6a3aaac60a 330 SUPERFAMILY SSF56553 53 179 1.73E-40 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS01925 4620ebc6b5a5872619646f6a3aaac60a 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 1.2E-111 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS01925 4620ebc6b5a5872619646f6a3aaac60a 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 5.6E-24 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS01925 4620ebc6b5a5872619646f6a3aaac60a 330 Gene3D G3DSA:3.30.1360.10 9 57 1.7E-10 T 23-04-2016 VV93_RS02330 226f03dad3f6ed1770699314d3875584 363 SMART SM01329 7 356 1.4E-202 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VV93_RS02330 226f03dad3f6ed1770699314d3875584 363 SUPERFAMILY SSF53659 4 360 1.54E-123 T 23-04-2016 VV93_RS02330 226f03dad3f6ed1770699314d3875584 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 356 5.5E-164 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 VV93_RS02330 226f03dad3f6ed1770699314d3875584 363 Gene3D G3DSA:3.40.718.10 3 359 2.4E-134 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VV93_RS02330 226f03dad3f6ed1770699314d3875584 363 PANTHER PTHR11835 1 360 3.4E-210 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 VV93_RS02330 226f03dad3f6ed1770699314d3875584 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 3.9E-137 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VV93_RS02330 226f03dad3f6ed1770699314d3875584 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.018 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 VV93_RS02330 226f03dad3f6ed1770699314d3875584 363 PANTHER PTHR11835:SF35 1 360 3.4E-210 T 23-04-2016 VV93_RS02330 226f03dad3f6ed1770699314d3875584 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 VV93_RS02335 e500defb8be47ecceda6043b560fa6e1 515 SUPERFAMILY SSF110921 392 498 8.24E-21 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VV93_RS02335 e500defb8be47ecceda6043b560fa6e1 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.356 T 23-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VV93_RS02335 e500defb8be47ecceda6043b560fa6e1 515 Gene3D G3DSA:3.20.20.70 1 347 5.3E-145 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS02335 e500defb8be47ecceda6043b560fa6e1 515 SUPERFAMILY SSF51569 1 291 2.38E-100 T 23-04-2016 VV93_RS02335 e500defb8be47ecceda6043b560fa6e1 515 SMART SM00917 369 499 4.1E-28 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VV93_RS02335 e500defb8be47ecceda6043b560fa6e1 515 PANTHER PTHR10277:SF9 1 507 4.2E-251 T 23-04-2016 VV93_RS02335 e500defb8be47ecceda6043b560fa6e1 515 Pfam PF00682 HMGL-like 4 273 2.2E-101 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 VV93_RS02335 e500defb8be47ecceda6043b560fa6e1 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VV93_RS02335 e500defb8be47ecceda6043b560fa6e1 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VV93_RS02335 e500defb8be47ecceda6043b560fa6e1 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 1.8E-237 T 23-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VV93_RS02335 e500defb8be47ecceda6043b560fa6e1 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 2.9E-30 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VV93_RS02335 e500defb8be47ecceda6043b560fa6e1 515 PANTHER PTHR10277 1 507 4.2E-251 T 23-04-2016 VV93_RS07665 517806fd4fcf35e60c12113a3844e3e3 397 Pfam PF13439 Glycosyltransferase Family 4 18 172 1.8E-12 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VV93_RS07665 517806fd4fcf35e60c12113a3844e3e3 397 PANTHER PTHR12526 7 396 2.3E-50 T 23-04-2016 VV93_RS07665 517806fd4fcf35e60c12113a3844e3e3 397 Pfam PF00534 Glycosyl transferases group 1 186 346 1.4E-34 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 VV93_RS07665 517806fd4fcf35e60c12113a3844e3e3 397 Gene3D G3DSA:3.40.50.2000 181 345 3.8E-23 T 23-04-2016 VV93_RS07665 517806fd4fcf35e60c12113a3844e3e3 397 SUPERFAMILY SSF53756 7 366 4.54E-64 T 23-04-2016 VV93_RS14580 8bb2f2410ee9654be4aba474ff110f84 429 Gene3D G3DSA:3.30.1490.20 121 190 1.2E-34 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VV93_RS14580 8bb2f2410ee9654be4aba474ff110f84 429 SUPERFAMILY SSF51246 329 424 4.29E-33 T 23-04-2016 IPR011054 Rudiment single hybrid motif VV93_RS14580 8bb2f2410ee9654be4aba474ff110f84 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 1.5E-29 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VV93_RS14580 8bb2f2410ee9654be4aba474ff110f84 429 SMART SM01210 330 423 6.3E-55 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VV93_RS14580 8bb2f2410ee9654be4aba474ff110f84 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.207 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VV93_RS14580 8bb2f2410ee9654be4aba474ff110f84 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 23-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VV93_RS14580 8bb2f2410ee9654be4aba474ff110f84 429 SMART SM01209 103 296 1.0E-143 T 23-04-2016 VV93_RS14580 8bb2f2410ee9654be4aba474ff110f84 429 SUPERFAMILY SSF56059 104 322 4.95E-70 T 23-04-2016 VV93_RS14580 8bb2f2410ee9654be4aba474ff110f84 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 8.8E-35 T 23-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VV93_RS14580 8bb2f2410ee9654be4aba474ff110f84 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 2.8E-83 T 23-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VV93_RS14580 8bb2f2410ee9654be4aba474ff110f84 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 2.4E-186 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VV93_RS14580 8bb2f2410ee9654be4aba474ff110f84 429 Gene3D G3DSA:3.30.470.20 191 328 1.4E-65 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VV93_RS14580 8bb2f2410ee9654be4aba474ff110f84 429 PANTHER PTHR10520 1 426 3.8E-293 T 23-04-2016 VV93_RS14580 8bb2f2410ee9654be4aba474ff110f84 429 Gene3D G3DSA:3.90.600.10 330 423 5.7E-36 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VV93_RS14580 8bb2f2410ee9654be4aba474ff110f84 429 Gene3D G3DSA:3.40.50.20 2 95 8.8E-37 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS14580 8bb2f2410ee9654be4aba474ff110f84 429 SUPERFAMILY SSF52440 1 103 3.31E-36 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS07990 f1431420457592e8b9018db436090bc5 56 PANTHER PTHR41532 2 46 3.5E-18 T 23-04-2016 VV93_RS07990 f1431420457592e8b9018db436090bc5 56 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 46 2.0E-15 T 23-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type VV93_RS07990 f1431420457592e8b9018db436090bc5 56 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 7.0E-21 T 23-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type VV93_RS15110 5bc83f6b8a9649d0566f55310e15e1b8 473 PANTHER PTHR24960 4 395 2.8E-191 T 23-04-2016 VV93_RS15110 5bc83f6b8a9649d0566f55310e15e1b8 473 Pfam PF13746 4Fe-4S dicluster domain 222 326 1.2E-41 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV93_RS15110 5bc83f6b8a9649d0566f55310e15e1b8 473 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 470 1.9E-29 T 23-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain VV93_RS15110 5bc83f6b8a9649d0566f55310e15e1b8 473 Gene3D G3DSA:3.30.70.20 283 320 2.4E-6 T 23-04-2016 VV93_RS15110 5bc83f6b8a9649d0566f55310e15e1b8 473 Gene3D G3DSA:2.60.40.10 356 471 2.6E-36 T 23-04-2016 IPR013783 Immunoglobulin-like fold VV93_RS15110 5bc83f6b8a9649d0566f55310e15e1b8 473 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 471 1.5E-172 T 23-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 VV93_RS15110 5bc83f6b8a9649d0566f55310e15e1b8 473 SUPERFAMILY SSF54862 107 129 1.0E-32 T 23-04-2016 VV93_RS15110 5bc83f6b8a9649d0566f55310e15e1b8 473 SUPERFAMILY SSF54862 175 352 1.0E-32 T 23-04-2016 VV93_RS15110 5bc83f6b8a9649d0566f55310e15e1b8 473 PANTHER PTHR24960:SF45 4 395 2.8E-191 T 23-04-2016 VV93_RS15110 5bc83f6b8a9649d0566f55310e15e1b8 473 Gene3D G3DSA:1.10.1060.10 225 282 4.7E-7 T 23-04-2016 VV93_RS15110 5bc83f6b8a9649d0566f55310e15e1b8 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV93_RS15110 5bc83f6b8a9649d0566f55310e15e1b8 473 Pfam PF12801 4Fe-4S binding domain 97 136 9.5E-9 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV93_RS07015 a8db90322493d4ac9d4b9800f5b5530d 456 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 406 422 - T 23-04-2016 IPR031312 Sodium/sulphate symporter, conserved site VV93_RS07015 a8db90322493d4ac9d4b9800f5b5530d 456 PANTHER PTHR10283:SF82 7 456 3.4E-128 T 23-04-2016 VV93_RS07015 a8db90322493d4ac9d4b9800f5b5530d 456 Pfam PF00939 Sodium:sulfate symporter transmembrane region 17 456 3.8E-56 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VV93_RS07015 a8db90322493d4ac9d4b9800f5b5530d 456 PANTHER PTHR10283 7 456 3.4E-128 T 23-04-2016 VV93_RS07015 a8db90322493d4ac9d4b9800f5b5530d 456 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 39 456 1.6E-109 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF55666 146 236 3.23E-28 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.16 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 1.7E-12 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 Gene3D G3DSA:2.40.50.140 619 694 9.6E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF50249 608 695 9.42E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 Gene3D G3DSA:1.10.10.400 227 314 1.3E-25 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 PIRSF PIRSF005499 2 708 1.0E-295 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF54211 293 489 2.53E-46 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 9.8E-18 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 7.1E-20 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF00013 KH domain 558 615 1.0E-8 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 Gene3D G3DSA:3.30.230.70 3 226 3.3E-81 T 23-04-2016 IPR027408 PNPase/RNase PH domain VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 Gene3D G3DSA:3.30.230.70 315 543 1.8E-87 T 23-04-2016 IPR027408 PNPase/RNase PH domain VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF00575 S1 RNA binding domain 620 691 1.5E-18 T 23-04-2016 IPR003029 S1 domain GO:0003676 VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 SMART SM00322 553 618 1.7E-11 T 23-04-2016 IPR004087 K Homology domain GO:0003676 VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 Gene3D G3DSA:3.30.1370.10 553 618 2.7E-24 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 2.7E-24 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF55666 451 550 2.95E-27 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 PANTHER PTHR11252 2 708 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF54791 555 623 1.14E-15 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 PANTHER PTHR11252:SF0 2 708 0.0 T 23-04-2016 VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF54211 5 145 1.27E-48 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS12180 5de812332fc70fca8bbd0194eaeec94f 708 SMART SM00316 621 691 1.8E-25 T 23-04-2016 IPR022967 RNA-binding domain, S1 VV93_RS07825 bd98d8b6a835ea475484404f649d3f05 57 Pfam PF04957 Ribosome modulation factor 1 54 6.8E-29 T 23-04-2016 IPR007040 Ribosome modulation factor VV93_RS07825 bd98d8b6a835ea475484404f649d3f05 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.214 T 23-04-2016 IPR007040 Ribosome modulation factor VV93_RS07825 bd98d8b6a835ea475484404f649d3f05 57 Gene3D G3DSA:1.10.10.620 1 56 4.1E-28 T 23-04-2016 IPR023200 Ribosome modulation factor-like domain VV93_RS07825 bd98d8b6a835ea475484404f649d3f05 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 52 2.0E-23 T 23-04-2016 IPR007040 Ribosome modulation factor VV93_RS02155 761f0fa50b32d2c31283ddb4764a4edd 169 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 25 165 1.2E-46 T 23-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VV93_RS02155 761f0fa50b32d2c31283ddb4764a4edd 169 PANTHER PTHR36504 1 166 6.0E-47 T 23-04-2016 VV93_RS02155 761f0fa50b32d2c31283ddb4764a4edd 169 Pfam PF03968 OstA-like protein 35 146 2.8E-31 T 23-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal VV93_RS02155 761f0fa50b32d2c31283ddb4764a4edd 169 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 6 165 24.741 T 23-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VV93_RS02155 761f0fa50b32d2c31283ddb4764a4edd 169 Gene3D G3DSA:2.60.450.10 26 161 2.2E-36 T 23-04-2016 VV93_RS09085 5af33a02945158ab29e70cef30de57dd 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 227 240 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site VV93_RS09085 5af33a02945158ab29e70cef30de57dd 637 PANTHER PTHR19375 14 70 2.1E-47 T 23-04-2016 VV93_RS09085 5af33a02945158ab29e70cef30de57dd 637 PANTHER PTHR19375 86 343 2.1E-47 T 23-04-2016 VV93_RS09085 5af33a02945158ab29e70cef30de57dd 637 PRINTS PR00301 70kDa heat shock protein signature 233 243 4.79E-7 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS09085 5af33a02945158ab29e70cef30de57dd 637 PRINTS PR00301 70kDa heat shock protein signature 166 186 4.79E-7 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS09085 5af33a02945158ab29e70cef30de57dd 637 PRINTS PR00301 70kDa heat shock protein signature 15 28 4.79E-7 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS09085 5af33a02945158ab29e70cef30de57dd 637 Gene3D G3DSA:3.30.420.40 16 105 3.7E-31 T 23-04-2016 VV93_RS09085 5af33a02945158ab29e70cef30de57dd 637 Gene3D G3DSA:3.30.420.40 144 233 3.7E-31 T 23-04-2016 VV93_RS09085 5af33a02945158ab29e70cef30de57dd 637 Pfam PF00012 Hsp70 protein 17 345 4.5E-17 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS09085 5af33a02945158ab29e70cef30de57dd 637 Gene3D G3DSA:3.30.420.40 234 326 2.1E-18 T 23-04-2016 VV93_RS09085 5af33a02945158ab29e70cef30de57dd 637 SUPERFAMILY SSF53067 15 208 4.44E-27 T 23-04-2016 VV93_RS09085 5af33a02945158ab29e70cef30de57dd 637 PANTHER PTHR19375:SF176 14 70 2.1E-47 T 23-04-2016 VV93_RS09085 5af33a02945158ab29e70cef30de57dd 637 PANTHER PTHR19375:SF176 86 343 2.1E-47 T 23-04-2016 VV93_RS09085 5af33a02945158ab29e70cef30de57dd 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 19 26 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site VV93_RS09085 5af33a02945158ab29e70cef30de57dd 637 SUPERFAMILY SSF53067 423 482 5.19E-27 T 23-04-2016 VV93_RS09085 5af33a02945158ab29e70cef30de57dd 637 SUPERFAMILY SSF53067 222 372 5.19E-27 T 23-04-2016 VV93_RS05350 617cab5e01436cfa1661782fc10ce4d3 624 PANTHER PTHR10434 345 620 2.9E-149 T 23-04-2016 VV93_RS05350 617cab5e01436cfa1661782fc10ce4d3 624 PANTHER PTHR10434:SF15 345 620 2.9E-149 T 23-04-2016 VV93_RS05350 617cab5e01436cfa1661782fc10ce4d3 624 SUPERFAMILY SSF69593 402 570 6.54E-30 T 23-04-2016 VV93_RS05350 617cab5e01436cfa1661782fc10ce4d3 624 Gene3D G3DSA:3.40.1130.10 445 568 8.2E-17 T 23-04-2016 VV93_RS05350 617cab5e01436cfa1661782fc10ce4d3 624 Pfam PF01553 Acyltransferase 442 567 3.0E-24 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VV93_RS05350 617cab5e01436cfa1661782fc10ce4d3 624 SUPERFAMILY SSF103473 14 424 1.09E-25 T 23-04-2016 IPR020846 Major facilitator superfamily domain VV93_RS05350 617cab5e01436cfa1661782fc10ce4d3 624 SMART SM00563 456 570 1.5E-35 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VV93_RS05350 617cab5e01436cfa1661782fc10ce4d3 624 Pfam PF07690 Major Facilitator Superfamily 19 382 9.6E-19 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV93_RS05350 617cab5e01436cfa1661782fc10ce4d3 624 Gene3D G3DSA:1.20.1250.20 19 205 2.2E-7 T 23-04-2016 VV93_RS05350 617cab5e01436cfa1661782fc10ce4d3 624 Gene3D G3DSA:1.20.1250.20 227 420 8.0E-10 T 23-04-2016 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 Gene3D G3DSA:3.50.50.60 2 138 6.7E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 1.3E-33 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.1E-28 T 23-04-2016 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.1E-28 T 23-04-2016 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.1E-28 T 23-04-2016 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.1E-28 T 23-04-2016 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.1E-28 T 23-04-2016 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 PANTHER PTHR22912 1 451 7.5E-252 T 23-04-2016 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 SUPERFAMILY SSF55424 337 451 1.39E-35 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 PIRSF PIRSF000350 1 445 2.2E-82 T 23-04-2016 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 9.6E-70 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 SUPERFAMILY SSF51905 1 362 5.51E-58 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 Gene3D G3DSA:3.30.390.30 327 451 1.6E-42 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 6.2E-215 T 23-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 PANTHER PTHR22912:SF106 1 451 7.5E-252 T 23-04-2016 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 Gene3D G3DSA:3.50.50.60 139 326 4.5E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 8.4E-65 T 23-04-2016 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 8.4E-65 T 23-04-2016 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 8.4E-65 T 23-04-2016 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 8.4E-65 T 23-04-2016 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 8.4E-65 T 23-04-2016 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 8.4E-65 T 23-04-2016 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 8.4E-65 T 23-04-2016 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 8.4E-65 T 23-04-2016 VV93_RS00340 cf0c53489ebc03ed9d405788d819ed49 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 8.4E-65 T 23-04-2016 VV93_RS09730 6dc236d2288b28f4d3244bf9260d6b0c 582 PANTHER PTHR37840 1 582 1.7E-227 T 23-04-2016 VV93_RS09730 6dc236d2288b28f4d3244bf9260d6b0c 582 Gene3D G3DSA:3.20.14.10 337 582 3.1E-120 T 23-04-2016 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 VV93_RS09730 6dc236d2288b28f4d3244bf9260d6b0c 582 Gene3D G3DSA:3.40.275.10 174 336 7.4E-84 T 23-04-2016 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 VV93_RS09730 6dc236d2288b28f4d3244bf9260d6b0c 582 Hamap MF_01254 L-fucose isomerase [fucI]. 1 582 67.686 T 23-04-2016 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 VV93_RS09730 6dc236d2288b28f4d3244bf9260d6b0c 582 Pfam PF07881 L-fucose isomerase, first N-terminal domain 5 172 3.3E-81 T 23-04-2016 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 VV93_RS09730 6dc236d2288b28f4d3244bf9260d6b0c 582 SUPERFAMILY SSF50443 352 582 1.12E-118 T 23-04-2016 IPR004216 L-fucose/L-arabinose isomerase, C-terminal VV93_RS09730 6dc236d2288b28f4d3244bf9260d6b0c 582 Pfam PF07882 L-fucose isomerase, second N-terminal domain 173 350 1.0E-92 T 23-04-2016 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 VV93_RS09730 6dc236d2288b28f4d3244bf9260d6b0c 582 Gene3D G3DSA:3.40.50.1070 2 173 3.9E-92 T 23-04-2016 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 VV93_RS09730 6dc236d2288b28f4d3244bf9260d6b0c 582 PANTHER PTHR37840:SF1 1 582 1.7E-227 T 23-04-2016 VV93_RS09730 6dc236d2288b28f4d3244bf9260d6b0c 582 SUPERFAMILY SSF53743 2 351 5.1E-157 T 23-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 VV93_RS09730 6dc236d2288b28f4d3244bf9260d6b0c 582 TIGRFAM TIGR01089 fucI: L-fucose isomerase 4 582 0.0 T 23-04-2016 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 VV93_RS09730 6dc236d2288b28f4d3244bf9260d6b0c 582 Pfam PF02952 L-fucose isomerase, C-terminal domain 382 546 5.2E-52 T 23-04-2016 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 VV93_RS05475 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 1.8E-60 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS05475 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 3.1E-46 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS05475 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 3.1E-46 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS05475 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 3.1E-46 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS05475 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 3.1E-46 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS05475 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 3.1E-46 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS05475 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 SMART SM00846 3 150 8.6E-95 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS05475 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 23-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS05475 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PIRSF PIRSF000149 1 331 2.8E-133 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS05475 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 SUPERFAMILY SSF51735 3 166 1.63E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS05475 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 1.2E-136 T 23-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS05475 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 Gene3D G3DSA:3.30.360.10 159 314 1.2E-84 T 23-04-2016 VV93_RS05475 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 Gene3D G3DSA:3.40.50.720 1 158 1.9E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS05475 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PANTHER PTHR10836 1 331 1.8E-236 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS05475 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 6.0E-70 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS05475 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 SUPERFAMILY SSF55347 149 312 1.81E-77 T 23-04-2016 VV93_RS05510 55ee924ce7b2227c8e0aa93d4f4c60cb 182 SUPERFAMILY SSF55469 1 181 4.58E-39 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 VV93_RS05510 55ee924ce7b2227c8e0aa93d4f4c60cb 182 PANTHER PTHR23026:SF107 1 175 3.4E-84 T 23-04-2016 VV93_RS05510 55ee924ce7b2227c8e0aa93d4f4c60cb 182 Gene3D G3DSA:3.40.109.10 1 181 1.0E-39 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 VV93_RS05510 55ee924ce7b2227c8e0aa93d4f4c60cb 182 Pfam PF00881 Nitroreductase family 8 161 1.6E-22 T 23-04-2016 IPR029479 Nitroreductase VV93_RS05510 55ee924ce7b2227c8e0aa93d4f4c60cb 182 PIRSF PIRSF000232 1 182 7.3E-62 T 23-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- VV93_RS05510 55ee924ce7b2227c8e0aa93d4f4c60cb 182 PANTHER PTHR23026 1 175 3.4E-84 T 23-04-2016 VV93_RS13585 ab3338494e0afd1fd6da17ae9daeeda5 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 5.9E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS13585 ab3338494e0afd1fd6da17ae9daeeda5 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 5.9E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS13585 ab3338494e0afd1fd6da17ae9daeeda5 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 5.9E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS13585 ab3338494e0afd1fd6da17ae9daeeda5 215 SUPERFAMILY SSF46894 145 211 4.42E-19 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV93_RS13585 ab3338494e0afd1fd6da17ae9daeeda5 215 PANTHER PTHR26402 108 212 5.1E-21 T 23-04-2016 VV93_RS13585 ab3338494e0afd1fd6da17ae9daeeda5 215 SMART SM00421 152 209 8.2E-22 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS13585 ab3338494e0afd1fd6da17ae9daeeda5 215 Gene3D G3DSA:1.10.10.10 118 212 4.0E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS13585 ab3338494e0afd1fd6da17ae9daeeda5 215 PANTHER PTHR26402:SF151 108 212 5.1E-21 T 23-04-2016 VV93_RS13585 ab3338494e0afd1fd6da17ae9daeeda5 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 1.6E-20 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS11125 5209ff9658cf86d355d7336e0a37ba23 377 Gene3D G3DSA:3.40.630.10 4 189 3.2E-76 T 23-04-2016 VV93_RS11125 5209ff9658cf86d355d7336e0a37ba23 377 Gene3D G3DSA:3.40.630.10 318 376 3.2E-76 T 23-04-2016 VV93_RS11125 5209ff9658cf86d355d7336e0a37ba23 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VV93_RS11125 5209ff9658cf86d355d7336e0a37ba23 377 PANTHER PTHR11014 1 376 5.4E-94 T 23-04-2016 VV93_RS11125 5209ff9658cf86d355d7336e0a37ba23 377 Gene3D G3DSA:3.30.70.360 190 290 5.8E-32 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain VV93_RS11125 5209ff9658cf86d355d7336e0a37ba23 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.111 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 VV93_RS11125 5209ff9658cf86d355d7336e0a37ba23 377 SUPERFAMILY SSF53187 6 180 2.24E-66 T 23-04-2016 VV93_RS11125 5209ff9658cf86d355d7336e0a37ba23 377 SUPERFAMILY SSF53187 294 376 2.24E-66 T 23-04-2016 VV93_RS11125 5209ff9658cf86d355d7336e0a37ba23 377 Pfam PF01546 Peptidase family M20/M25/M40 64 374 6.8E-46 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VV93_RS11125 5209ff9658cf86d355d7336e0a37ba23 377 SUPERFAMILY SSF55031 181 291 5.08E-28 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain VV93_RS11125 5209ff9658cf86d355d7336e0a37ba23 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 7.6E-180 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 VV93_RS11125 5209ff9658cf86d355d7336e0a37ba23 377 PANTHER PTHR11014:SF106 1 376 5.4E-94 T 23-04-2016 VV93_RS11125 5209ff9658cf86d355d7336e0a37ba23 377 Pfam PF07687 Peptidase dimerisation domain 177 284 1.0E-21 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain VV93_RS12640 c1ce142d706cc97ca3a8dda7d35ff3d7 952 Gene3D G3DSA:3.30.830.10 284 463 9.8E-18 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VV93_RS12640 c1ce142d706cc97ca3a8dda7d35ff3d7 952 PANTHER PTHR11851 24 868 1.2E-273 T 23-04-2016 VV93_RS12640 c1ce142d706cc97ca3a8dda7d35ff3d7 952 Gene3D G3DSA:3.30.830.10 522 735 2.3E-50 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VV93_RS12640 c1ce142d706cc97ca3a8dda7d35ff3d7 952 Gene3D G3DSA:3.30.830.10 51 268 2.9E-58 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VV93_RS12640 c1ce142d706cc97ca3a8dda7d35ff3d7 952 SUPERFAMILY SSF63411 519 721 1.67E-48 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV93_RS12640 c1ce142d706cc97ca3a8dda7d35ff3d7 952 Gene3D G3DSA:3.30.830.10 748 930 5.6E-24 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VV93_RS12640 c1ce142d706cc97ca3a8dda7d35ff3d7 952 SUPERFAMILY SSF63411 738 942 2.07E-40 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV93_RS12640 c1ce142d706cc97ca3a8dda7d35ff3d7 952 SUPERFAMILY SSF63411 281 469 4.0E-30 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV93_RS12640 c1ce142d706cc97ca3a8dda7d35ff3d7 952 Pfam PF05193 Peptidase M16 inactive domain 687 858 9.7E-20 T 23-04-2016 IPR007863 Peptidase M16, C-terminal VV93_RS12640 c1ce142d706cc97ca3a8dda7d35ff3d7 952 Pfam PF05193 Peptidase M16 inactive domain 220 394 9.1E-30 T 23-04-2016 IPR007863 Peptidase M16, C-terminal VV93_RS12640 c1ce142d706cc97ca3a8dda7d35ff3d7 952 SUPERFAMILY SSF63411 50 259 1.5E-55 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV93_RS12640 c1ce142d706cc97ca3a8dda7d35ff3d7 952 PANTHER PTHR11851:SF136 24 868 1.2E-273 T 23-04-2016 VV93_RS12640 c1ce142d706cc97ca3a8dda7d35ff3d7 952 Pfam PF00675 Insulinase (Peptidase family M16) 63 179 1.6E-17 T 23-04-2016 IPR011765 Peptidase M16, N-terminal VV93_RS12640 c1ce142d706cc97ca3a8dda7d35ff3d7 952 Pfam PF00675 Insulinase (Peptidase family M16) 541 654 1.7E-16 T 23-04-2016 IPR011765 Peptidase M16, N-terminal VV93_RS03675 54d5362ae10c5a864c69311e332d2170 513 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03675 54d5362ae10c5a864c69311e332d2170 513 PRINTS PR00175 Sodium/alanine symporter signature 363 385 1.8E-57 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03675 54d5362ae10c5a864c69311e332d2170 513 PRINTS PR00175 Sodium/alanine symporter signature 426 446 1.8E-57 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03675 54d5362ae10c5a864c69311e332d2170 513 PRINTS PR00175 Sodium/alanine symporter signature 86 108 1.8E-57 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03675 54d5362ae10c5a864c69311e332d2170 513 PRINTS PR00175 Sodium/alanine symporter signature 217 236 1.8E-57 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03675 54d5362ae10c5a864c69311e332d2170 513 PRINTS PR00175 Sodium/alanine symporter signature 304 322 1.8E-57 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03675 54d5362ae10c5a864c69311e332d2170 513 PRINTS PR00175 Sodium/alanine symporter signature 189 207 1.8E-57 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03675 54d5362ae10c5a864c69311e332d2170 513 PANTHER PTHR30330 1 492 2.6E-298 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03675 54d5362ae10c5a864c69311e332d2170 513 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 460 7.5E-135 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03675 54d5362ae10c5a864c69311e332d2170 513 Pfam PF01235 Sodium:alanine symporter family 51 471 5.5E-150 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03675 54d5362ae10c5a864c69311e332d2170 513 PANTHER PTHR30330:SF7 1 492 2.6E-298 T 23-04-2016 VV93_RS13790 818b64702f7c56c878a1b64bf45b3631 275 PANTHER PTHR30481 2 268 6.5E-120 T 23-04-2016 VV93_RS13790 818b64702f7c56c878a1b64bf45b3631 275 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 1.8E-69 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VV93_RS13790 818b64702f7c56c878a1b64bf45b3631 275 Gene3D G3DSA:1.10.1020.10 60 156 3.1E-34 T 23-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 VV93_RS13790 818b64702f7c56c878a1b64bf45b3631 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 8.7E-18 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VV93_RS13790 818b64702f7c56c878a1b64bf45b3631 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 8.7E-18 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VV93_RS13790 818b64702f7c56c878a1b64bf45b3631 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 8.7E-18 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VV93_RS13790 818b64702f7c56c878a1b64bf45b3631 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 8.7E-18 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VV93_RS13790 818b64702f7c56c878a1b64bf45b3631 275 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV93_RS13790 818b64702f7c56c878a1b64bf45b3631 275 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 4.1E-94 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VV93_RS13790 818b64702f7c56c878a1b64bf45b3631 275 PANTHER PTHR30481:SF3 2 268 6.5E-120 T 23-04-2016 VV93_RS13790 818b64702f7c56c878a1b64bf45b3631 275 Gene3D G3DSA:3.40.50.150 1 59 2.2E-53 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS13790 818b64702f7c56c878a1b64bf45b3631 275 Gene3D G3DSA:3.40.50.150 160 267 2.2E-53 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS13790 818b64702f7c56c878a1b64bf45b3631 275 SUPERFAMILY SSF53335 5 268 2.71E-76 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS13790 818b64702f7c56c878a1b64bf45b3631 275 PIRSF PIRSF000398 1 274 2.5E-71 T 23-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 VV93_RS05955 9488790c0912f66bedda213bedf39842 414 PANTHER PTHR12286:SF6 3 410 9.9E-153 T 23-04-2016 VV93_RS05955 9488790c0912f66bedda213bedf39842 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 392 1.5E-29 T 23-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal VV93_RS05955 9488790c0912f66bedda213bedf39842 414 SUPERFAMILY SSF51735 3 178 1.36E-16 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS05955 9488790c0912f66bedda213bedf39842 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 1.9E-34 T 23-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 VV93_RS05955 9488790c0912f66bedda213bedf39842 414 PANTHER PTHR12286 3 410 9.9E-153 T 23-04-2016 VV93_RS05955 9488790c0912f66bedda213bedf39842 414 Gene3D G3DSA:3.40.50.720 2 196 3.7E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS05305 9eee86f00f3b0506950e90673953e6b4 404 Gene3D G3DSA:3.40.640.10 51 279 2.2E-67 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS05305 9eee86f00f3b0506950e90673953e6b4 404 PANTHER PTHR11751 9 399 1.2E-193 T 23-04-2016 VV93_RS05305 9eee86f00f3b0506950e90673953e6b4 404 Gene3D G3DSA:3.90.1150.10 280 403 4.5E-41 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS05305 9eee86f00f3b0506950e90673953e6b4 404 PANTHER PTHR11751:SF303 9 399 1.2E-193 T 23-04-2016 VV93_RS05305 9eee86f00f3b0506950e90673953e6b4 404 SUPERFAMILY SSF53383 5 400 7.93E-95 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS05305 9eee86f00f3b0506950e90673953e6b4 404 Pfam PF00155 Aminotransferase class I and II 61 391 1.1E-47 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV93_RS12590 ffe83418104faa07c1a3fa28d4508a6d 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.566 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS12590 ffe83418104faa07c1a3fa28d4508a6d 117 PANTHER PTHR15680 1 117 2.8E-58 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS12590 ffe83418104faa07c1a3fa28d4508a6d 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 7.6E-42 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS12590 ffe83418104faa07c1a3fa28d4508a6d 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 7.6E-42 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS12590 ffe83418104faa07c1a3fa28d4508a6d 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 7.6E-42 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS12590 ffe83418104faa07c1a3fa28d4508a6d 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 23-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS12590 ffe83418104faa07c1a3fa28d4508a6d 117 SUPERFAMILY SSF50104 2 115 4.51E-48 T 23-04-2016 IPR008991 Translation protein SH3-like domain VV93_RS12590 ffe83418104faa07c1a3fa28d4508a6d 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.0E-52 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS12590 ffe83418104faa07c1a3fa28d4508a6d 117 Pfam PF01245 Ribosomal protein L19 3 113 7.1E-51 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS12590 ffe83418104faa07c1a3fa28d4508a6d 117 PIRSF PIRSF002191 1 117 7.2E-52 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS12255 18740f977cb789d818c494e1b2f3dd61 276 PANTHER PTHR20941 15 275 3.1E-129 T 23-04-2016 VV93_RS12255 18740f977cb789d818c494e1b2f3dd61 276 SUPERFAMILY SSF51717 4 274 3.4E-106 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 VV93_RS12255 18740f977cb789d818c494e1b2f3dd61 276 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 VV93_RS12255 18740f977cb789d818c494e1b2f3dd61 276 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 6.6E-104 T 23-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 VV93_RS12255 18740f977cb789d818c494e1b2f3dd61 276 PANTHER PTHR20941:SF1 15 275 3.1E-129 T 23-04-2016 VV93_RS12255 18740f977cb789d818c494e1b2f3dd61 276 Pfam PF00809 Pterin binding enzyme 18 257 9.7E-92 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 VV93_RS12255 18740f977cb789d818c494e1b2f3dd61 276 Gene3D G3DSA:3.20.20.20 14 274 2.8E-111 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 VV93_RS12255 18740f977cb789d818c494e1b2f3dd61 276 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 VV93_RS13350 a86fe01e49af28229add2f6a9314c974 357 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 1.5E-70 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 VV93_RS13350 a86fe01e49af28229add2f6a9314c974 357 PANTHER PTHR33529 1 355 8.5E-152 T 23-04-2016 VV93_RS13350 a86fe01e49af28229add2f6a9314c974 357 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 5.9E-133 T 23-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 VV93_RS13350 a86fe01e49af28229add2f6a9314c974 357 PANTHER PTHR33529:SF1 1 355 8.5E-152 T 23-04-2016 VV93_RS04145 888f52ab1c5ddaed817e12b3b8125d6d 458 SUPERFAMILY SSF102405 119 327 7.48E-41 T 23-04-2016 VV93_RS04145 888f52ab1c5ddaed817e12b3b8125d6d 458 Gene3D G3DSA:3.40.50.450 123 450 4.7E-126 T 23-04-2016 VV93_RS04145 888f52ab1c5ddaed817e12b3b8125d6d 458 Gene3D G3DSA:3.30.1850.10 1 113 2.9E-57 T 23-04-2016 IPR027820 Domain of unknown function DUF4478 VV93_RS04145 888f52ab1c5ddaed817e12b3b8125d6d 458 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 1.1E-50 T 23-04-2016 IPR027820 Domain of unknown function DUF4478 VV93_RS04145 888f52ab1c5ddaed817e12b3b8125d6d 458 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 3.1E-57 T 23-04-2016 IPR021826 Protein of unknown function DUF3412 VV93_RS04145 888f52ab1c5ddaed817e12b3b8125d6d 458 Pfam PF03641 Possible lysine decarboxylase 187 325 3.4E-34 T 23-04-2016 IPR031100 LOG family VV93_RS04145 888f52ab1c5ddaed817e12b3b8125d6d 458 PANTHER PTHR31223:SF12 83 339 2.3E-181 T 23-04-2016 VV93_RS04145 888f52ab1c5ddaed817e12b3b8125d6d 458 PANTHER PTHR31223:SF12 356 381 2.3E-181 T 23-04-2016 VV93_RS04145 888f52ab1c5ddaed817e12b3b8125d6d 458 PANTHER PTHR31223 83 339 2.3E-181 T 23-04-2016 VV93_RS04145 888f52ab1c5ddaed817e12b3b8125d6d 458 PANTHER PTHR31223 356 381 2.3E-181 T 23-04-2016 VV93_RS01980 e90a1035c0bcdf29bb8f7e90ca768850 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 219 1.6E-45 T 23-04-2016 VV93_RS01980 e90a1035c0bcdf29bb8f7e90ca768850 476 Gene3D G3DSA:2.40.30.10 243 359 5.9E-20 T 23-04-2016 VV93_RS01980 e90a1035c0bcdf29bb8f7e90ca768850 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site VV93_RS01980 e90a1035c0bcdf29bb8f7e90ca768850 476 SUPERFAMILY SSF50447 242 327 8.17E-24 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain VV93_RS01980 e90a1035c0bcdf29bb8f7e90ca768850 476 Gene3D G3DSA:3.40.50.300 19 234 2.1E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01980 e90a1035c0bcdf29bb8f7e90ca768850 476 SUPERFAMILY SSF50465 332 433 6.23E-31 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VV93_RS01980 e90a1035c0bcdf29bb8f7e90ca768850 476 PANTHER PTHR23115 74 355 7.9E-69 T 23-04-2016 VV93_RS01980 e90a1035c0bcdf29bb8f7e90ca768850 476 PANTHER PTHR23115 31 53 7.9E-69 T 23-04-2016 VV93_RS01980 e90a1035c0bcdf29bb8f7e90ca768850 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 216 8.9E-14 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VV93_RS01980 e90a1035c0bcdf29bb8f7e90ca768850 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 8.1E-201 T 23-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VV93_RS01980 e90a1035c0bcdf29bb8f7e90ca768850 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 6.8E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS01980 e90a1035c0bcdf29bb8f7e90ca768850 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 6.8E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS01980 e90a1035c0bcdf29bb8f7e90ca768850 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 6.8E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS01980 e90a1035c0bcdf29bb8f7e90ca768850 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 6.8E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS01980 e90a1035c0bcdf29bb8f7e90ca768850 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 6.8E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS01980 e90a1035c0bcdf29bb8f7e90ca768850 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 54.023 T 23-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VV93_RS01980 e90a1035c0bcdf29bb8f7e90ca768850 476 SUPERFAMILY SSF52540 19 234 2.59E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14295 3dfe408024f90d9f33f170f778278b6d 181 PANTHER PTHR11046 5 181 2.0E-121 T 23-04-2016 VV93_RS14295 3dfe408024f90d9f33f170f778278b6d 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.353 T 23-04-2016 IPR022894 Oligoribonuclease GO:0016788 VV93_RS14295 3dfe408024f90d9f33f170f778278b6d 181 Gene3D G3DSA:3.30.420.10 4 180 1.9E-74 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS14295 3dfe408024f90d9f33f170f778278b6d 181 SUPERFAMILY SSF53098 1 180 1.04E-47 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS14295 3dfe408024f90d9f33f170f778278b6d 181 Pfam PF00929 Exonuclease 9 170 1.9E-36 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VV93_RS14295 3dfe408024f90d9f33f170f778278b6d 181 PANTHER PTHR11046:SF1 5 181 2.0E-121 T 23-04-2016 VV93_RS14295 3dfe408024f90d9f33f170f778278b6d 181 SMART SM00479 7 180 6.6E-22 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VV93_RS11635 08cdfd1567764b6cdaf28df3ab699489 255 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 4 248 6.2E-96 T 23-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 VV93_RS11635 08cdfd1567764b6cdaf28df3ab699489 255 PANTHER PTHR37838:SF1 1 255 1.9E-101 T 23-04-2016 VV93_RS11635 08cdfd1567764b6cdaf28df3ab699489 255 SMART SM00900 142 240 1.0E-32 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VV93_RS11635 08cdfd1567764b6cdaf28df3ab699489 255 Pfam PF04205 FMN-binding domain 142 237 1.2E-15 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VV93_RS11635 08cdfd1567764b6cdaf28df3ab699489 255 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 5 252 35.565 T 23-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 VV93_RS11635 08cdfd1567764b6cdaf28df3ab699489 255 PIRSF PIRSF009437 1 255 1.1E-104 T 23-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 VV93_RS11635 08cdfd1567764b6cdaf28df3ab699489 255 PANTHER PTHR37838 1 255 1.9E-101 T 23-04-2016 VV93_RS05895 d6b02cd1fcba55cd922fe62bbddb39f9 698 PANTHER PTHR33989:SF4 27 425 3.7E-113 T 23-04-2016 VV93_RS05895 d6b02cd1fcba55cd922fe62bbddb39f9 698 PANTHER PTHR33989 27 425 3.7E-113 T 23-04-2016 VV93_RS05895 d6b02cd1fcba55cd922fe62bbddb39f9 698 SUPERFAMILY SSF141868 451 688 1.44E-63 T 23-04-2016 IPR001633 EAL domain VV93_RS05895 d6b02cd1fcba55cd922fe62bbddb39f9 698 Gene3D G3DSA:3.20.20.450 450 687 2.4E-67 T 23-04-2016 IPR001633 EAL domain VV93_RS05895 d6b02cd1fcba55cd922fe62bbddb39f9 698 Pfam PF02378 Phosphotransferase system, EIIC 31 333 6.8E-18 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VV93_RS05895 d6b02cd1fcba55cd922fe62bbddb39f9 698 SMART SM00052 436 680 4.0E-59 T 23-04-2016 IPR001633 EAL domain VV93_RS05895 d6b02cd1fcba55cd922fe62bbddb39f9 698 Pfam PF00563 EAL domain 450 674 9.3E-60 T 23-04-2016 IPR001633 EAL domain VV93_RS00045 13b8d047e5ce092d0e81556032c924d9 688 Pfam PF05746 DALR anticodon binding domain 580 677 2.3E-9 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VV93_RS00045 13b8d047e5ce092d0e81556032c924d9 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 4.3E-296 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV93_RS00045 13b8d047e5ce092d0e81556032c924d9 688 SUPERFAMILY SSF109604 351 490 2.35E-12 T 23-04-2016 VV93_RS00045 13b8d047e5ce092d0e81556032c924d9 688 PANTHER PTHR30075 1 688 0.0 T 23-04-2016 VV93_RS00045 13b8d047e5ce092d0e81556032c924d9 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 6.8E-204 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV93_RS00045 13b8d047e5ce092d0e81556032c924d9 688 Gene3D G3DSA:1.10.730.10 582 676 1.9E-5 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS00045 13b8d047e5ce092d0e81556032c924d9 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 25.784 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV93_RS00045 13b8d047e5ce092d0e81556032c924d9 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 1.9E-35 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV93_RS00045 13b8d047e5ce092d0e81556032c924d9 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.9E-35 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV93_RS00045 13b8d047e5ce092d0e81556032c924d9 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.9E-35 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV93_RS00045 13b8d047e5ce092d0e81556032c924d9 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.9E-35 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV93_RS00045 13b8d047e5ce092d0e81556032c924d9 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 1.9E-35 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV93_RS02400 5e5c1bd7a07835a74ecd52441102fbb1 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 3.6E-260 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 VV93_RS02400 5e5c1bd7a07835a74ecd52441102fbb1 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.52 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 VV93_RS02400 5e5c1bd7a07835a74ecd52441102fbb1 610 SUPERFAMILY SSF56235 2 234 7.46E-76 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VV93_RS02400 5e5c1bd7a07835a74ecd52441102fbb1 610 Gene3D G3DSA:3.60.20.10 2 236 2.3E-79 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VV93_RS02400 5e5c1bd7a07835a74ecd52441102fbb1 610 Gene3D G3DSA:3.40.50.10490 245 446 3.9E-67 T 23-04-2016 VV93_RS02400 5e5c1bd7a07835a74ecd52441102fbb1 610 Gene3D G3DSA:3.40.50.10490 447 610 5.3E-65 T 23-04-2016 VV93_RS02400 5e5c1bd7a07835a74ecd52441102fbb1 610 PANTHER PTHR10937 1 610 0.0 T 23-04-2016 VV93_RS02400 5e5c1bd7a07835a74ecd52441102fbb1 610 Pfam PF13522 Glutamine amidotransferase domain 54 174 2.7E-22 T 23-04-2016 VV93_RS02400 5e5c1bd7a07835a74ecd52441102fbb1 610 Pfam PF01380 SIS domain 290 418 1.7E-32 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VV93_RS02400 5e5c1bd7a07835a74ecd52441102fbb1 610 Pfam PF01380 SIS domain 463 592 8.7E-24 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VV93_RS02400 5e5c1bd7a07835a74ecd52441102fbb1 610 SUPERFAMILY SSF53697 245 610 3.25E-113 T 23-04-2016 VV93_RS02400 5e5c1bd7a07835a74ecd52441102fbb1 610 PANTHER PTHR10937:SF0 1 610 0.0 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 VV93_RS01895 53cb1432ef5b20470731faa13e159d32 144 SUPERFAMILY SSF52080 4 143 4.71E-46 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P VV93_RS01895 53cb1432ef5b20470731faa13e159d32 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 23-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01895 53cb1432ef5b20470731faa13e159d32 144 Gene3D G3DSA:3.100.10.10 32 143 2.0E-26 T 23-04-2016 VV93_RS01895 53cb1432ef5b20470731faa13e159d32 144 PANTHER PTHR12934 1 144 3.1E-72 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 VV93_RS01895 53cb1432ef5b20470731faa13e159d32 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 5.6E-51 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 VV93_RS01895 53cb1432ef5b20470731faa13e159d32 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.8E-31 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P VV93_RS01895 53cb1432ef5b20470731faa13e159d32 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.018 T 23-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 VV93_RS09255 0848bed0788eaf3b2327c459f09314f0 200 PANTHER PTHR12907:SF14 1 192 1.0E-60 T 23-04-2016 VV93_RS09255 0848bed0788eaf3b2327c459f09314f0 200 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 97 187 5.3E-20 T 23-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 VV93_RS09255 0848bed0788eaf3b2327c459f09314f0 200 PANTHER PTHR12907 1 192 1.0E-60 T 23-04-2016 VV93_RS09255 0848bed0788eaf3b2327c459f09314f0 200 SMART SM00702 11 187 5.4E-26 T 23-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 VV93_RS14570 f9305061ee877795d7bbb06bf7d6c2e6 132 Gene3D G3DSA:1.10.1660.10 1 57 7.2E-27 T 23-04-2016 VV93_RS14570 f9305061ee877795d7bbb06bf7d6c2e6 132 SUPERFAMILY SSF46955 2 121 1.68E-33 T 23-04-2016 IPR009061 Putative DNA-binding domain VV93_RS14570 f9305061ee877795d7bbb06bf7d6c2e6 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 1.6E-65 T 23-04-2016 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 VV93_RS14570 f9305061ee877795d7bbb06bf7d6c2e6 132 Gene3D G3DSA:1.10.1660.10 58 132 2.0E-25 T 23-04-2016 VV93_RS14570 f9305061ee877795d7bbb06bf7d6c2e6 132 Pfam PF09278 MerR, DNA binding 47 109 2.4E-17 T 23-04-2016 IPR015358 Transcription regulator MerR, DNA binding VV93_RS14570 f9305061ee877795d7bbb06bf7d6c2e6 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 6.8E-10 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV93_RS14570 f9305061ee877795d7bbb06bf7d6c2e6 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 6.8E-10 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV93_RS14570 f9305061ee877795d7bbb06bf7d6c2e6 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 6.8E-10 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV93_RS14570 f9305061ee877795d7bbb06bf7d6c2e6 132 SMART SM00422 2 71 1.4E-28 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV93_RS14570 f9305061ee877795d7bbb06bf7d6c2e6 132 Pfam PF00376 MerR family regulatory protein 4 40 4.9E-16 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV93_RS14570 f9305061ee877795d7bbb06bf7d6c2e6 132 PANTHER PTHR30204 1 132 3.0E-54 T 23-04-2016 VV93_RS14570 f9305061ee877795d7bbb06bf7d6c2e6 132 PANTHER PTHR30204:SF18 1 132 3.0E-54 T 23-04-2016 VV93_RS13935 c1b927494de027c96d21e91ad90216a0 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 1.0E-222 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VV93_RS13935 c1b927494de027c96d21e91ad90216a0 443 SMART SM00382 49 332 7.8E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS13935 c1b927494de027c96d21e91ad90216a0 443 SMART SM01086 335 429 1.1E-19 T 23-04-2016 IPR019489 Clp ATPase, C-terminal VV93_RS13935 c1b927494de027c96d21e91ad90216a0 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.115 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VV93_RS13935 c1b927494de027c96d21e91ad90216a0 443 Gene3D G3DSA:3.40.50.300 3 110 1.8E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13935 c1b927494de027c96d21e91ad90216a0 443 Gene3D G3DSA:3.40.50.300 245 331 1.8E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13935 c1b927494de027c96d21e91ad90216a0 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 171 329 1.5E-43 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VV93_RS13935 c1b927494de027c96d21e91ad90216a0 443 Gene3D G3DSA:1.10.8.10 213 243 1.2E-35 T 23-04-2016 VV93_RS13935 c1b927494de027c96d21e91ad90216a0 443 Gene3D G3DSA:1.10.8.10 111 177 1.2E-35 T 23-04-2016 VV93_RS13935 c1b927494de027c96d21e91ad90216a0 443 PANTHER PTHR11262 1 105 3.0E-210 T 23-04-2016 VV93_RS13935 c1b927494de027c96d21e91ad90216a0 443 PANTHER PTHR11262 218 443 3.0E-210 T 23-04-2016 VV93_RS13935 c1b927494de027c96d21e91ad90216a0 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 100 1.0E-6 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VV93_RS13935 c1b927494de027c96d21e91ad90216a0 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 3.9E-5 T 23-04-2016 IPR019489 Clp ATPase, C-terminal VV93_RS13935 c1b927494de027c96d21e91ad90216a0 443 PANTHER PTHR11262:SF3 1 105 3.0E-210 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VV93_RS13935 c1b927494de027c96d21e91ad90216a0 443 PANTHER PTHR11262:SF3 218 443 3.0E-210 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VV93_RS13935 c1b927494de027c96d21e91ad90216a0 443 SUPERFAMILY SSF52540 3 441 4.72E-96 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13935 c1b927494de027c96d21e91ad90216a0 443 Gene3D G3DSA:1.10.8.60 335 443 8.0E-36 T 23-04-2016 VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 PANTHER PTHR10457 3 386 4.1E-147 T 23-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 Gene3D G3DSA:3.30.230.10 4 208 2.5E-76 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 Pfam PF10509 Galactokinase galactose-binding signature 12 59 7.2E-21 T 23-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 Pfam PF08544 GHMP kinases C terminal 280 361 7.3E-11 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 PRINTS PR00959 Mevalonate kinase family signature 120 142 4.3E-44 T 23-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 PRINTS PR00959 Mevalonate kinase family signature 329 346 4.3E-44 T 23-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 PRINTS PR00959 Mevalonate kinase family signature 163 182 4.3E-44 T 23-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 PRINTS PR00959 Mevalonate kinase family signature 26 50 4.3E-44 T 23-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 SUPERFAMILY SSF55060 206 382 2.88E-53 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 23-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 23-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 Pfam PF00288 GHMP kinases N terminal domain 115 181 1.1E-10 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 3.5E-148 T 23-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 Hamap MF_00246 Galactokinase [galK]. 26 382 44.266 T 23-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 SUPERFAMILY SSF54211 2 204 8.35E-64 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 Gene3D G3DSA:3.30.70.890 209 381 1.0E-62 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 PIRSF PIRSF000530 1 385 2.5E-127 T 23-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 PRINTS PR00473 Galactokinase signature 113 131 9.4E-30 T 23-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 PRINTS PR00473 Galactokinase signature 93 104 9.4E-30 T 23-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 PRINTS PR00473 Galactokinase signature 264 278 9.4E-30 T 23-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 PRINTS PR00473 Galactokinase signature 28 46 9.4E-30 T 23-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11875 277502474f956d2c3295cb51ad6b2b15 386 PANTHER PTHR10457:SF6 3 386 4.1E-147 T 23-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS10570 d9439d75cdaa91b5c6762188ea80db57 445 PIRSF PIRSF006060 1 433 2.0E-49 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VV93_RS10570 d9439d75cdaa91b5c6762188ea80db57 445 Pfam PF13520 Amino acid permease 8 421 1.5E-36 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VV93_RS10570 d9439d75cdaa91b5c6762188ea80db57 445 PANTHER PTHR11785:SF332 1 440 1.3E-289 T 23-04-2016 VV93_RS10570 d9439d75cdaa91b5c6762188ea80db57 445 PANTHER PTHR11785 1 440 1.3E-289 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VV93_RS08350 e3ceed6a74c987894acb0ed09598eeaa 173 Pfam PF13527 Acetyltransferase (GNAT) domain 15 125 6.8E-9 T 23-04-2016 VV93_RS08350 e3ceed6a74c987894acb0ed09598eeaa 173 SUPERFAMILY SSF55729 10 132 2.19E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS08350 e3ceed6a74c987894acb0ed09598eeaa 173 Gene3D G3DSA:3.40.630.30 10 129 1.2E-14 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS00320 1aaea2776103e0accacd0a72e97afa56 203 Pfam PF01081 KDPG and KHG aldolase 5 197 4.6E-73 T 23-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VV93_RS00320 1aaea2776103e0accacd0a72e97afa56 203 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 23-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VV93_RS00320 1aaea2776103e0accacd0a72e97afa56 203 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 202 6.1E-83 T 23-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VV93_RS00320 1aaea2776103e0accacd0a72e97afa56 203 SUPERFAMILY SSF51569 3 201 1.15E-66 T 23-04-2016 VV93_RS00320 1aaea2776103e0accacd0a72e97afa56 203 Gene3D G3DSA:3.20.20.70 2 201 3.9E-75 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS00320 1aaea2776103e0accacd0a72e97afa56 203 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 23-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 VV93_RS00320 1aaea2776103e0accacd0a72e97afa56 203 PANTHER PTHR30246 1 202 4.5E-133 T 23-04-2016 VV93_RS00320 1aaea2776103e0accacd0a72e97afa56 203 PANTHER PTHR30246:SF5 1 202 4.5E-133 T 23-04-2016 VV93_RS10920 3bd104fc3fb8d285c6c3bdc4c2539fd6 356 SUPERFAMILY SSF50341 209 343 1.7E-13 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VV93_RS10920 3bd104fc3fb8d285c6c3bdc4c2539fd6 356 PIRSF PIRSF020479 6 355 2.4E-153 T 23-04-2016 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like VV93_RS10920 3bd104fc3fb8d285c6c3bdc4c2539fd6 356 Pfam PF01584 CheW-like domain 210 342 4.8E-15 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VV93_RS10920 3bd104fc3fb8d285c6c3bdc4c2539fd6 356 SMART SM00260 206 340 4.0E-4 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VV93_RS02700 5517cb6ea9a9e77c997207428963281a 761 PANTHER PTHR10169:SF30 1 526 0.0 T 23-04-2016 VV93_RS02700 5517cb6ea9a9e77c997207428963281a 761 PANTHER PTHR10169 1 526 0.0 T 23-04-2016 VV93_RS02700 5517cb6ea9a9e77c997207428963281a 761 Gene3D G3DSA:3.90.199.10 32 239 1.5E-105 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 VV93_RS02700 5517cb6ea9a9e77c997207428963281a 761 Gene3D G3DSA:3.90.199.10 335 399 1.5E-105 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 VV93_RS02700 5517cb6ea9a9e77c997207428963281a 761 SUPERFAMILY SSF101904 499 743 4.19E-51 T 23-04-2016 VV93_RS02700 5517cb6ea9a9e77c997207428963281a 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 469 1.0E-135 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS02700 5517cb6ea9a9e77c997207428963281a 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 691 2.1E-8 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV93_RS02700 5517cb6ea9a9e77c997207428963281a 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 637 0.0073 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV93_RS02700 5517cb6ea9a9e77c997207428963281a 761 Gene3D G3DSA:2.120.10.90 498 731 4.8E-27 T 23-04-2016 VV93_RS02700 5517cb6ea9a9e77c997207428963281a 761 Gene3D G3DSA:3.30.1360.40 240 333 4.5E-25 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain VV93_RS02700 5517cb6ea9a9e77c997207428963281a 761 SMART SM00434 13 463 1.1E-227 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS02700 5517cb6ea9a9e77c997207428963281a 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.661 T 23-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS02700 5517cb6ea9a9e77c997207428963281a 761 SUPERFAMILY SSF56719 33 485 5.75E-154 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VV93_RS02700 5517cb6ea9a9e77c997207428963281a 761 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 23-04-2016 VV93_RS04785 abf799f7f0c4fd76266718f0ed700973 554 Pfam PF13537 Glutamine amidotransferase domain 48 166 5.4E-40 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain VV93_RS04785 abf799f7f0c4fd76266718f0ed700973 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 1.7E-115 T 23-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 VV93_RS04785 abf799f7f0c4fd76266718f0ed700973 554 Gene3D G3DSA:3.40.50.620 196 510 9.6E-115 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS04785 abf799f7f0c4fd76266718f0ed700973 554 PANTHER PTHR11772:SF11 2 538 4.3E-295 T 23-04-2016 VV93_RS04785 abf799f7f0c4fd76266718f0ed700973 554 Pfam PF00733 Asparagine synthase 367 511 1.7E-40 T 23-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 VV93_RS04785 abf799f7f0c4fd76266718f0ed700973 554 Pfam PF00733 Asparagine synthase 212 366 1.5E-54 T 23-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 VV93_RS04785 abf799f7f0c4fd76266718f0ed700973 554 SUPERFAMILY SSF52402 209 479 1.39E-73 T 23-04-2016 VV93_RS04785 abf799f7f0c4fd76266718f0ed700973 554 PANTHER PTHR11772 2 538 4.3E-295 T 23-04-2016 VV93_RS04785 abf799f7f0c4fd76266718f0ed700973 554 SUPERFAMILY SSF56235 1 196 1.89E-57 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VV93_RS04785 abf799f7f0c4fd76266718f0ed700973 554 Gene3D G3DSA:3.60.20.10 2 189 1.9E-67 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VV93_RS02750 3752a24761f0f02e50a3d90906e7b6a8 211 Gene3D G3DSA:3.40.30.10 8 100 4.1E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS02750 3752a24761f0f02e50a3d90906e7b6a8 211 SUPERFAMILY SSF52833 11 110 8.42E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS02750 3752a24761f0f02e50a3d90906e7b6a8 211 SUPERFAMILY SSF47616 82 208 2.42E-24 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VV93_RS02750 3752a24761f0f02e50a3d90906e7b6a8 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 8.8E-17 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VV93_RS02750 3752a24761f0f02e50a3d90906e7b6a8 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 194 5.7E-7 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal VV93_RS02750 3752a24761f0f02e50a3d90906e7b6a8 211 PANTHER PTHR11260:SF44 9 210 1.8E-120 T 23-04-2016 VV93_RS02750 3752a24761f0f02e50a3d90906e7b6a8 211 Gene3D G3DSA:1.20.1050.10 101 208 3.1E-16 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VV93_RS02750 3752a24761f0f02e50a3d90906e7b6a8 211 PANTHER PTHR11260 9 210 1.8E-120 T 23-04-2016 VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 SUPERFAMILY SSF53150 114 266 1.19E-40 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 PANTHER PTHR11361:SF86 3 853 0.0 T 23-04-2016 VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 Pfam PF01624 MutS domain I 8 119 1.2E-41 T 23-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 Pfam PF05190 MutS family domain IV 427 517 9.8E-29 T 23-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 PANTHER PTHR11361 3 853 0.0 T 23-04-2016 VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 845 25.228 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 Gene3D G3DSA:3.40.50.300 566 796 7.5E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 SMART SM00533 283 590 3.7E-105 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 SUPERFAMILY SSF48334 267 564 1.44E-89 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 Gene3D G3DSA:3.40.1170.10 3 120 1.5E-51 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 Pfam PF05192 MutS domain III 269 558 7.5E-39 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 SUPERFAMILY SSF55271 5 113 2.09E-42 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 Pfam PF00488 MutS domain V 609 796 6.6E-87 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 SUPERFAMILY SSF52540 566 796 3.99E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 Gene3D G3DSA:3.30.420.110 127 255 2.2E-40 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 Pfam PF05188 MutS domain II 128 253 1.3E-30 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 Gene3D G3DSA:1.10.1420.10 264 467 2.8E-55 T 23-04-2016 VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 851 0.0 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 VV93_RS12740 52d1cabce2ef61a8c4dca5e0c9be3ad7 853 SMART SM00534 606 793 7.8E-119 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VV93_RS13625 1ebfa84c66428f365d4b96f660605fb1 479 Gene3D G3DSA:3.30.450.20 176 298 5.0E-16 T 23-04-2016 VV93_RS13625 1ebfa84c66428f365d4b96f660605fb1 479 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 308 471 4.2E-50 T 23-04-2016 IPR000160 GGDEF domain VV93_RS13625 1ebfa84c66428f365d4b96f660605fb1 479 PANTHER PTHR10799 7 14 1.7E-26 T 23-04-2016 VV93_RS13625 1ebfa84c66428f365d4b96f660605fb1 479 PANTHER PTHR10799 344 472 1.7E-26 T 23-04-2016 VV93_RS13625 1ebfa84c66428f365d4b96f660605fb1 479 SUPERFAMILY SSF55785 174 298 5.41E-16 T 23-04-2016 IPR000014 PAS domain VV93_RS13625 1ebfa84c66428f365d4b96f660605fb1 479 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 182 307 1.1E-12 T 23-04-2016 IPR000014 PAS domain VV93_RS13625 1ebfa84c66428f365d4b96f660605fb1 479 Pfam PF00990 Diguanylate cyclase, GGDEF domain 311 469 9.9E-44 T 23-04-2016 IPR000160 GGDEF domain VV93_RS13625 1ebfa84c66428f365d4b96f660605fb1 479 SUPERFAMILY SSF55073 316 472 4.94E-46 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS13625 1ebfa84c66428f365d4b96f660605fb1 479 SMART SM00267 300 474 4.7E-57 T 23-04-2016 IPR000160 GGDEF domain VV93_RS13625 1ebfa84c66428f365d4b96f660605fb1 479 PANTHER PTHR10799:SF750 7 14 1.7E-26 T 23-04-2016 VV93_RS13625 1ebfa84c66428f365d4b96f660605fb1 479 PANTHER PTHR10799:SF750 344 472 1.7E-26 T 23-04-2016 VV93_RS13625 1ebfa84c66428f365d4b96f660605fb1 479 Pfam PF13426 PAS domain 196 299 1.8E-7 T 23-04-2016 IPR000014 PAS domain VV93_RS13625 1ebfa84c66428f365d4b96f660605fb1 479 Gene3D G3DSA:3.30.70.270 313 472 9.4E-53 T 23-04-2016 VV93_RS13625 1ebfa84c66428f365d4b96f660605fb1 479 SMART SM00091 185 251 2.0E-8 T 23-04-2016 IPR000014 PAS domain VV93_RS05705 a7517b0b1d3981f44949329ff3a90bc4 198 Pfam PF04060 Putative Fe-S cluster 44 75 1.0E-14 T 23-04-2016 IPR007202 4Fe-4S domain GO:0051536 VV93_RS05705 a7517b0b1d3981f44949329ff3a90bc4 198 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 186 2.7E-86 T 23-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 VV93_RS05705 a7517b0b1d3981f44949329ff3a90bc4 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 114 125 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV93_RS05705 a7517b0b1d3981f44949329ff3a90bc4 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV93_RS05705 a7517b0b1d3981f44949329ff3a90bc4 198 SUPERFAMILY SSF54862 37 173 4.45E-31 T 23-04-2016 VV93_RS05705 a7517b0b1d3981f44949329ff3a90bc4 198 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 182 42.78 T 23-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VV93_RS05705 a7517b0b1d3981f44949329ff3a90bc4 198 PIRSF PIRSF005784 3 188 1.1E-86 T 23-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VV93_RS05705 a7517b0b1d3981f44949329ff3a90bc4 198 Gene3D G3DSA:3.30.70.20 47 118 1.5E-6 T 23-04-2016 VV93_RS05705 a7517b0b1d3981f44949329ff3a90bc4 198 Gene3D G3DSA:3.30.70.20 119 175 4.0E-17 T 23-04-2016 VV93_RS05705 a7517b0b1d3981f44949329ff3a90bc4 198 Pfam PF14697 4Fe-4S dicluster domain 107 161 7.0E-18 T 23-04-2016 VV93_RS05705 a7517b0b1d3981f44949329ff3a90bc4 198 PANTHER PTHR11938 1 183 2.6E-93 T 23-04-2016 VV93_RS05705 a7517b0b1d3981f44949329ff3a90bc4 198 PANTHER PTHR11938:SF64 1 183 2.6E-93 T 23-04-2016 VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 SUPERFAMILY SSF53187 168 264 8.79E-52 T 23-04-2016 VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 SUPERFAMILY SSF53187 315 391 8.79E-52 T 23-04-2016 VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 PANTHER PTHR30404:SF1 1 421 8.0E-165 T 23-04-2016 VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 170 388 8.8E-49 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 SMART SM00646 230 388 7.4E-61 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 SUPERFAMILY SSF54106 472 518 5.62E-9 T 23-04-2016 IPR018392 LysM domain VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 Gene3D G3DSA:3.40.630.40 316 392 4.7E-55 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 Gene3D G3DSA:3.40.630.40 168 265 4.7E-55 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 Gene3D G3DSA:3.10.350.10 471 517 6.3E-14 T 23-04-2016 IPR018392 LysM domain VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 Gene3D G3DSA:3.10.350.10 406 452 1.3E-15 T 23-04-2016 IPR018392 LysM domain VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 SUPERFAMILY SSF54106 408 452 9.29E-10 T 23-04-2016 IPR018392 LysM domain VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 SUPERFAMILY SSF54106 527 570 1.96E-10 T 23-04-2016 IPR018392 LysM domain VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 Gene3D G3DSA:3.10.350.10 527 571 1.6E-16 T 23-04-2016 IPR018392 LysM domain VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 SMART SM00257 474 517 4.7E-12 T 23-04-2016 IPR018392 LysM domain VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 SMART SM00257 527 570 5.6E-15 T 23-04-2016 IPR018392 LysM domain VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 SMART SM00257 409 452 3.1E-13 T 23-04-2016 IPR018392 LysM domain VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 Pfam PF01476 LysM domain 475 516 3.2E-9 T 23-04-2016 IPR018392 LysM domain VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 Pfam PF01476 LysM domain 528 570 1.3E-13 T 23-04-2016 IPR018392 LysM domain VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 Pfam PF01476 LysM domain 410 451 2.6E-12 T 23-04-2016 IPR018392 LysM domain VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 Pfam PF11741 AMIN domain 33 135 8.5E-16 T 23-04-2016 IPR021731 AMIN domain VV93_RS14225 e710f0e4ee34d8ae7930154d17b9a346 572 PANTHER PTHR30404 1 421 8.0E-165 T 23-04-2016 VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 Gene3D G3DSA:2.40.50.100 102 176 5.1E-21 T 23-04-2016 VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 Gene3D G3DSA:2.40.50.100 207 281 5.8E-22 T 23-04-2016 VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 Gene3D G3DSA:2.40.50.100 3 78 3.6E-21 T 23-04-2016 VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 PANTHER PTHR23151 382 630 7.5E-258 T 23-04-2016 VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 PANTHER PTHR23151 204 363 7.5E-258 T 23-04-2016 VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 PANTHER PTHR23151 21 108 7.5E-258 T 23-04-2016 VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 SUPERFAMILY SSF51230 1 90 3.93E-22 T 23-04-2016 IPR011053 Single hybrid motif VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 SUPERFAMILY SSF52777 388 629 3.51E-81 T 23-04-2016 VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 Pfam PF02817 e3 binding domain 323 357 3.2E-14 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 SUPERFAMILY SSF51230 100 192 1.44E-22 T 23-04-2016 IPR011053 Single hybrid motif VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 PANTHER PTHR23151:SF68 382 630 7.5E-258 T 23-04-2016 VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 PANTHER PTHR23151:SF68 204 363 7.5E-258 T 23-04-2016 VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 PANTHER PTHR23151:SF68 21 108 7.5E-258 T 23-04-2016 VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 187 630 9.1E-204 T 23-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 399 629 1.3E-79 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 228 257 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 123 152 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 Gene3D G3DSA:3.30.559.10 389 630 5.7E-82 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 SUPERFAMILY SSF47005 316 361 1.11E-12 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 Pfam PF00364 Biotin-requiring enzyme 206 276 2.3E-21 T 23-04-2016 IPR000089 Biotin/lipoyl attachment VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 Pfam PF00364 Biotin-requiring enzyme 102 171 6.6E-20 T 23-04-2016 IPR000089 Biotin/lipoyl attachment VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 Pfam PF00364 Biotin-requiring enzyme 4 73 5.9E-20 T 23-04-2016 IPR000089 Biotin/lipoyl attachment VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 SUPERFAMILY SSF51230 206 297 2.22E-23 T 23-04-2016 IPR011053 Single hybrid motif VV93_RS12530 c528779aba00d74c57e400f63a3bc1e0 630 Gene3D G3DSA:4.10.320.10 315 362 6.1E-21 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VV93_RS05565 e4cecda0e96b7252f4d69af8215b7934 220 Pfam PF02080 TrkA-C domain 154 214 1.0E-8 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS05565 e4cecda0e96b7252f4d69af8215b7934 220 SUPERFAMILY SSF116726 134 215 3.79E-15 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS05565 e4cecda0e96b7252f4d69af8215b7934 220 Gene3D G3DSA:3.40.50.720 4 141 4.6E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS05565 e4cecda0e96b7252f4d69af8215b7934 220 Pfam PF02254 TrkA-N domain 8 123 4.1E-27 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VV93_RS05565 e4cecda0e96b7252f4d69af8215b7934 220 SUPERFAMILY SSF51735 6 136 4.31E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS05565 e4cecda0e96b7252f4d69af8215b7934 220 Gene3D G3DSA:3.30.70.1450 149 215 7.4E-14 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS05565 e4cecda0e96b7252f4d69af8215b7934 220 PANTHER PTHR16254 2 162 2.0E-42 T 23-04-2016 VV93_RS14020 ab5e17361ec13fd2d42365dd25bbeb32 91 PANTHER PTHR37526 1 90 4.0E-15 T 23-04-2016 VV93_RS14020 ab5e17361ec13fd2d42365dd25bbeb32 91 Gene3D G3DSA:3.40.1260.10 1 87 3.5E-20 T 23-04-2016 IPR027396 DsrEFH-like VV93_RS14020 ab5e17361ec13fd2d42365dd25bbeb32 91 Pfam PF04077 DsrH like protein 9 85 2.5E-19 T 23-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VV93_RS14020 ab5e17361ec13fd2d42365dd25bbeb32 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 90 3.0E-23 T 23-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VV93_RS14020 ab5e17361ec13fd2d42365dd25bbeb32 91 SUPERFAMILY SSF75169 1 90 1.79E-20 T 23-04-2016 IPR027396 DsrEFH-like VV93_RS05870 cd7f417dab2c95713421929ff31e0a1c 236 PRINTS PR00313 NodO calcium binding signature 88 96 2.35E-12 T 23-04-2016 VV93_RS05870 cd7f417dab2c95713421929ff31e0a1c 236 PRINTS PR00313 NodO calcium binding signature 106 114 2.35E-12 T 23-04-2016 VV93_RS05870 cd7f417dab2c95713421929ff31e0a1c 236 PRINTS PR00313 NodO calcium binding signature 124 133 2.35E-12 T 23-04-2016 VV93_RS05870 cd7f417dab2c95713421929ff31e0a1c 236 PRINTS PR00313 NodO calcium binding signature 67 78 2.35E-12 T 23-04-2016 VV93_RS05870 cd7f417dab2c95713421929ff31e0a1c 236 PANTHER PTHR38340 1 225 7.2E-13 T 23-04-2016 VV93_RS05870 cd7f417dab2c95713421929ff31e0a1c 236 SUPERFAMILY SSF51120 69 203 7.46E-22 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VV93_RS05870 cd7f417dab2c95713421929ff31e0a1c 236 SUPERFAMILY SSF51120 11 96 1.16E-19 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VV93_RS05870 cd7f417dab2c95713421929ff31e0a1c 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 48 66 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VV93_RS05870 cd7f417dab2c95713421929ff31e0a1c 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 57 75 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VV93_RS05870 cd7f417dab2c95713421929ff31e0a1c 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 66 84 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VV93_RS05870 cd7f417dab2c95713421929ff31e0a1c 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 75 93 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VV93_RS05870 cd7f417dab2c95713421929ff31e0a1c 236 Gene3D G3DSA:2.150.10.10 9 200 3.3E-30 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VV93_RS05870 cd7f417dab2c95713421929ff31e0a1c 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 61 77 5.2E-4 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VV93_RS05870 cd7f417dab2c95713421929ff31e0a1c 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 45 59 0.0055 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VV93_RS05870 cd7f417dab2c95713421929ff31e0a1c 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 99 113 0.02 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VV93_RS05870 cd7f417dab2c95713421929ff31e0a1c 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 27 40 49.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VV93_RS05870 cd7f417dab2c95713421929ff31e0a1c 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 79 95 2.5E-4 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VV93_RS01490 9c25e9d83501973a753f08aae94fca10 344 Gene3D G3DSA:3.40.50.2000 172 334 6.8E-21 T 23-04-2016 VV93_RS01490 9c25e9d83501973a753f08aae94fca10 344 PANTHER PTHR30160 1 329 3.2E-171 T 23-04-2016 VV93_RS01490 9c25e9d83501973a753f08aae94fca10 344 SUPERFAMILY SSF53756 2 329 7.53E-65 T 23-04-2016 VV93_RS01490 9c25e9d83501973a753f08aae94fca10 344 PANTHER PTHR30160:SF10 1 329 3.2E-171 T 23-04-2016 VV93_RS01490 9c25e9d83501973a753f08aae94fca10 344 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 71 304 3.2E-15 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 VV93_RS01490 9c25e9d83501973a753f08aae94fca10 344 Gene3D G3DSA:3.40.50.2000 2 142 4.7E-36 T 23-04-2016 VV93_RS12840 35eeadd1cda02a345fc96489307608a9 243 SUPERFAMILY SSF50249 8 78 3.94E-14 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS12840 35eeadd1cda02a345fc96489307608a9 243 Gene3D G3DSA:2.40.50.140 10 78 8.5E-8 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS12840 35eeadd1cda02a345fc96489307608a9 243 Pfam PF11967 Recombination protein O N terminal 8 79 1.2E-22 T 23-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal VV93_RS12840 35eeadd1cda02a345fc96489307608a9 243 SUPERFAMILY SSF57863 88 168 1.67E-12 T 23-04-2016 VV93_RS12840 35eeadd1cda02a345fc96489307608a9 243 Pfam PF02565 Recombination protein O C terminal 88 228 5.1E-24 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VV93_RS12840 35eeadd1cda02a345fc96489307608a9 243 Hamap MF_00201 DNA repair protein RecO [recO]. 4 233 22.96 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VV93_RS12840 35eeadd1cda02a345fc96489307608a9 243 PANTHER PTHR33991 5 243 1.2E-65 T 23-04-2016 VV93_RS12840 35eeadd1cda02a345fc96489307608a9 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 9 233 3.0E-40 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VV93_RS14830 5db1d1bffefd8fd33dd606e43fd66c40 435 PANTHER PTHR24031 1 434 1.4E-278 T 23-04-2016 VV93_RS14830 5db1d1bffefd8fd33dd606e43fd66c40 435 Pfam PF00271 Helicase conserved C-terminal domain 243 351 9.6E-30 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS14830 5db1d1bffefd8fd33dd606e43fd66c40 435 Pfam PF00270 DEAD/DEAH box helicase 33 207 8.6E-45 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV93_RS14830 5db1d1bffefd8fd33dd606e43fd66c40 435 SUPERFAMILY SSF52540 85 364 7.41E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14830 5db1d1bffefd8fd33dd606e43fd66c40 435 SMART SM00487 28 234 1.0E-54 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV93_RS14830 5db1d1bffefd8fd33dd606e43fd66c40 435 Gene3D G3DSA:3.40.50.300 224 382 1.3E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14830 5db1d1bffefd8fd33dd606e43fd66c40 435 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.365 T 23-04-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 VV93_RS14830 5db1d1bffefd8fd33dd606e43fd66c40 435 Gene3D G3DSA:3.40.50.300 7 223 2.8E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14830 5db1d1bffefd8fd33dd606e43fd66c40 435 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VV93_RS14830 5db1d1bffefd8fd33dd606e43fd66c40 435 SMART SM00490 270 351 1.3E-31 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS14830 5db1d1bffefd8fd33dd606e43fd66c40 435 PANTHER PTHR24031:SF173 1 434 1.4E-278 T 23-04-2016 VV93_RS14155 d436216a85a44f80a113ac22181402c4 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 7.2E-39 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VV93_RS14155 d436216a85a44f80a113ac22181402c4 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 1.4E-85 T 23-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 VV93_RS14155 d436216a85a44f80a113ac22181402c4 247 SMART SM00967 5 81 4.6E-19 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 VV93_RS14155 d436216a85a44f80a113ac22181402c4 247 SUPERFAMILY SSF55315 3 77 2.35E-19 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like VV93_RS14155 d436216a85a44f80a113ac22181402c4 247 PANTHER PTHR12029 4 247 1.3E-78 T 23-04-2016 VV93_RS14155 d436216a85a44f80a113ac22181402c4 247 Gene3D G3DSA:3.40.1280.10 92 245 2.7E-55 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VV93_RS14155 d436216a85a44f80a113ac22181402c4 247 SUPERFAMILY SSF75217 69 244 6.15E-48 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases VV93_RS14155 d436216a85a44f80a113ac22181402c4 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.66 T 23-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB VV93_RS14155 d436216a85a44f80a113ac22181402c4 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 6.8E-19 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 VV93_RS14155 d436216a85a44f80a113ac22181402c4 247 Gene3D G3DSA:3.30.1330.30 2 77 2.3E-25 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 PANTHER PTHR24078:SF231 1 352 7.2E-173 T 23-04-2016 VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 SUPERFAMILY SSF49493 115 140 1.83E-19 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 SUPERFAMILY SSF49493 188 263 1.83E-19 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 Gene3D G3DSA:2.10.230.10 143 212 4.6E-25 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 23-04-2016 IPR018253 DnaJ domain, conserved site VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 Gene3D G3DSA:1.10.287.110 1 104 7.6E-37 T 23-04-2016 IPR001623 DnaJ domain VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 PRINTS PR00625 DnaJ domain signature 42 62 1.8E-32 T 23-04-2016 IPR001623 DnaJ domain VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 PRINTS PR00625 DnaJ domain signature 7 25 1.8E-32 T 23-04-2016 IPR001623 DnaJ domain VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 PRINTS PR00625 DnaJ domain signature 25 40 1.8E-32 T 23-04-2016 IPR001623 DnaJ domain VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 PRINTS PR00625 DnaJ domain signature 62 81 1.8E-32 T 23-04-2016 IPR001623 DnaJ domain VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 SUPERFAMILY SSF49493 261 346 6.28E-23 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 Gene3D G3DSA:2.60.260.20 258 335 3.2E-23 T 23-04-2016 VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 Gene3D G3DSA:2.60.260.20 213 256 7.5E-22 T 23-04-2016 VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 Gene3D G3DSA:2.60.260.20 110 142 7.5E-22 T 23-04-2016 VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 3.3E-141 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 SUPERFAMILY SSF46565 1 110 3.79E-36 T 23-04-2016 IPR001623 DnaJ domain VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 PANTHER PTHR24078 1 352 7.2E-173 T 23-04-2016 VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 Pfam PF01556 DnaJ C terminal domain 123 335 1.6E-44 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 42.93 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 SMART SM00271 4 62 1.7E-31 T 23-04-2016 IPR001623 DnaJ domain VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 Pfam PF00684 DnaJ central domain 149 209 5.7E-15 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 Pfam PF00226 DnaJ domain 5 67 2.4E-27 T 23-04-2016 IPR001623 DnaJ domain VV93_RS03925 f22db398e269900baa066e335ee4ff4f 381 SUPERFAMILY SSF57938 136 212 4.05E-23 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VV93_RS02590 445ee91aa1df5f7d81bec9b73bb2c375 339 PANTHER PTHR11735:SF6 1 334 1.5E-167 T 23-04-2016 VV93_RS02590 445ee91aa1df5f7d81bec9b73bb2c375 339 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.293 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VV93_RS02590 445ee91aa1df5f7d81bec9b73bb2c375 339 Gene3D G3DSA:3.30.420.40 1 159 1.2E-48 T 23-04-2016 VV93_RS02590 445ee91aa1df5f7d81bec9b73bb2c375 339 SUPERFAMILY SSF53067 3 123 5.61E-32 T 23-04-2016 VV93_RS02590 445ee91aa1df5f7d81bec9b73bb2c375 339 PANTHER PTHR11735 1 334 1.5E-167 T 23-04-2016 VV93_RS02590 445ee91aa1df5f7d81bec9b73bb2c375 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.5E-50 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VV93_RS02590 445ee91aa1df5f7d81bec9b73bb2c375 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.5E-50 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VV93_RS02590 445ee91aa1df5f7d81bec9b73bb2c375 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.5E-50 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VV93_RS02590 445ee91aa1df5f7d81bec9b73bb2c375 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.5E-50 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VV93_RS02590 445ee91aa1df5f7d81bec9b73bb2c375 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.5E-50 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VV93_RS02590 445ee91aa1df5f7d81bec9b73bb2c375 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.5E-50 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VV93_RS02590 445ee91aa1df5f7d81bec9b73bb2c375 339 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 23-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VV93_RS02590 445ee91aa1df5f7d81bec9b73bb2c375 339 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 3.9E-125 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VV93_RS02590 445ee91aa1df5f7d81bec9b73bb2c375 339 Pfam PF00814 Glycoprotease family 24 307 1.2E-103 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VV93_RS02590 445ee91aa1df5f7d81bec9b73bb2c375 339 SUPERFAMILY SSF53067 101 309 6.48E-43 T 23-04-2016 VV93_RS02590 445ee91aa1df5f7d81bec9b73bb2c375 339 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.2E-134 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VV93_RS08220 78bcc64520fec2293cb4f1e380767392 675 SUPERFAMILY SSF58104 372 673 8.89E-57 T 23-04-2016 VV93_RS08220 78bcc64520fec2293cb4f1e380767392 675 Gene3D G3DSA:1.10.287.950 427 643 1.3E-48 T 23-04-2016 VV93_RS08220 78bcc64520fec2293cb4f1e380767392 675 PANTHER PTHR32089:SF44 380 675 1.7E-97 T 23-04-2016 VV93_RS08220 78bcc64520fec2293cb4f1e380767392 675 PANTHER PTHR32089 380 675 1.7E-97 T 23-04-2016 VV93_RS08220 78bcc64520fec2293cb4f1e380767392 675 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 490 670 2.4E-39 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS08220 78bcc64520fec2293cb4f1e380767392 675 SMART SM00283 412 673 1.2E-42 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS08730 0137a4c45da9cba231bc1a6ebb464316 543 Pfam PF00089 Trypsin 41 272 1.8E-58 T 23-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VV93_RS08730 0137a4c45da9cba231bc1a6ebb464316 543 Gene3D G3DSA:2.40.10.10 133 272 2.4E-42 T 23-04-2016 VV93_RS08730 0137a4c45da9cba231bc1a6ebb464316 543 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 82 87 - T 23-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VV93_RS08730 0137a4c45da9cba231bc1a6ebb464316 543 PANTHER PTHR24276 2 274 9.7E-84 T 23-04-2016 VV93_RS08730 0137a4c45da9cba231bc1a6ebb464316 543 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 72 87 2.0E-13 T 23-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV93_RS08730 0137a4c45da9cba231bc1a6ebb464316 543 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 222 234 2.0E-13 T 23-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV93_RS08730 0137a4c45da9cba231bc1a6ebb464316 543 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 129 143 2.0E-13 T 23-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV93_RS08730 0137a4c45da9cba231bc1a6ebb464316 543 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 223 234 - T 23-04-2016 IPR033116 Serine proteases, trypsin family, serine active site VV93_RS08730 0137a4c45da9cba231bc1a6ebb464316 543 Gene3D G3DSA:2.40.10.10 41 77 7.6E-14 T 23-04-2016 VV93_RS08730 0137a4c45da9cba231bc1a6ebb464316 543 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 522 541 9.2E-5 T 23-04-2016 IPR020008 GlyGly-CTERM domain VV93_RS08730 0137a4c45da9cba231bc1a6ebb464316 543 Gene3D G3DSA:2.40.10.10 78 132 4.3E-20 T 23-04-2016 VV93_RS08730 0137a4c45da9cba231bc1a6ebb464316 543 SMART SM00020 40 272 1.2E-76 T 23-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VV93_RS08730 0137a4c45da9cba231bc1a6ebb464316 543 Gene3D G3DSA:2.60.40.360 291 362 6.1E-4 T 23-04-2016 IPR008962 PapD-like VV93_RS08730 0137a4c45da9cba231bc1a6ebb464316 543 SUPERFAMILY SSF50494 9 277 1.13E-71 T 23-04-2016 IPR009003 Peptidase S1, PA clan VV93_RS02945 f4f3303416dfcbe2529df1de5e275e29 318 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 300 8.6E-136 T 23-04-2016 IPR005911 Protein YhcC-like GO:0051536 VV93_RS02945 f4f3303416dfcbe2529df1de5e275e29 318 Pfam PF04055 Radical SAM superfamily 43 198 8.0E-16 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VV93_RS02945 f4f3303416dfcbe2529df1de5e275e29 318 SMART SM00729 23 247 2.9E-43 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VV93_RS02945 f4f3303416dfcbe2529df1de5e275e29 318 PANTHER PTHR11135 1 290 6.3E-143 T 23-04-2016 VV93_RS02945 f4f3303416dfcbe2529df1de5e275e29 318 Pfam PF16199 Radical_SAM C-terminal domain 209 279 9.0E-18 T 23-04-2016 IPR032432 Radical SAM, C-terminal extension VV93_RS02945 f4f3303416dfcbe2529df1de5e275e29 318 Gene3D G3DSA:3.80.30.20 22 252 3.9E-34 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VV93_RS02945 f4f3303416dfcbe2529df1de5e275e29 318 SUPERFAMILY SSF102114 13 268 2.22E-49 T 23-04-2016 VV93_RS02945 f4f3303416dfcbe2529df1de5e275e29 318 PANTHER PTHR11135:SF1 1 290 6.3E-143 T 23-04-2016 IPR005911 Protein YhcC-like GO:0051536 VV93_RS03070 c15662bc7bc1a6ea36d45455932ea6e5 303 PANTHER PTHR11075 1 301 8.4E-146 T 23-04-2016 VV93_RS03070 c15662bc7bc1a6ea36d45455932ea6e5 303 SUPERFAMILY SSF75620 2 302 4.97E-127 T 23-04-2016 VV93_RS03070 c15662bc7bc1a6ea36d45455932ea6e5 303 Pfam PF03462 PCRF domain 1 157 1.5E-48 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VV93_RS03070 c15662bc7bc1a6ea36d45455932ea6e5 303 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 183 199 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VV93_RS03070 c15662bc7bc1a6ea36d45455932ea6e5 303 Gene3D G3DSA:1.20.58.410 1 54 1.3E-10 T 23-04-2016 VV93_RS03070 c15662bc7bc1a6ea36d45455932ea6e5 303 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 301 7.0E-151 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VV93_RS03070 c15662bc7bc1a6ea36d45455932ea6e5 303 Gene3D G3DSA:3.30.160.20 166 244 3.1E-37 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain VV93_RS03070 c15662bc7bc1a6ea36d45455932ea6e5 303 PANTHER PTHR11075:SF6 1 301 8.4E-146 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VV93_RS03070 c15662bc7bc1a6ea36d45455932ea6e5 303 Pfam PF00472 RF-1 domain 167 275 6.1E-39 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VV93_RS03070 c15662bc7bc1a6ea36d45455932ea6e5 303 SMART SM00937 23 133 2.6E-54 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VV93_RS02300 c00b35f3ed6c4ce0c5eed5a49bd84528 428 PANTHER PTHR10657 1 427 1.2E-128 T 23-04-2016 VV93_RS02300 c00b35f3ed6c4ce0c5eed5a49bd84528 428 Hamap MF_01183 Chaperone SurA [surA]. 8 423 32.326 T 23-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 VV93_RS02300 c00b35f3ed6c4ce0c5eed5a49bd84528 428 PANTHER PTHR10657:SF15 1 427 1.2E-128 T 23-04-2016 VV93_RS02300 c00b35f3ed6c4ce0c5eed5a49bd84528 428 Pfam PF13616 PPIC-type PPIASE domain 163 269 8.1E-21 T 23-04-2016 VV93_RS02300 c00b35f3ed6c4ce0c5eed5a49bd84528 428 Pfam PF00639 PPIC-type PPIASE domain 284 375 6.2E-22 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 VV93_RS02300 c00b35f3ed6c4ce0c5eed5a49bd84528 428 Pfam PF09312 SurA N-terminal domain 24 141 8.1E-44 T 23-04-2016 IPR015391 SurA N-terminal VV93_RS02300 c00b35f3ed6c4ce0c5eed5a49bd84528 428 SUPERFAMILY SSF54534 172 270 9.81E-25 T 23-04-2016 VV93_RS02300 c00b35f3ed6c4ce0c5eed5a49bd84528 428 SUPERFAMILY SSF109998 24 197 1.02E-37 T 23-04-2016 IPR027304 Trigger factor/SurA domain VV93_RS02300 c00b35f3ed6c4ce0c5eed5a49bd84528 428 SUPERFAMILY SSF54534 278 380 5.89E-29 T 23-04-2016 VV93_RS02300 c00b35f3ed6c4ce0c5eed5a49bd84528 428 Gene3D G3DSA:3.10.50.40 168 271 1.6E-27 T 23-04-2016 VV93_RS02300 c00b35f3ed6c4ce0c5eed5a49bd84528 428 Gene3D G3DSA:3.10.50.40 278 401 7.8E-33 T 23-04-2016 VV93_RS14220 cbd5c05067d662fb2e905e239edf31e2 664 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 23-04-2016 IPR014762 DNA mismatch repair, conserved site VV93_RS14220 cbd5c05067d662fb2e905e239edf31e2 664 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 120 1.7E-11 T 23-04-2016 VV93_RS14220 cbd5c05067d662fb2e905e239edf31e2 664 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 6.6E-101 T 23-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 VV93_RS14220 cbd5c05067d662fb2e905e239edf31e2 664 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 663 25.358 T 23-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 VV93_RS14220 cbd5c05067d662fb2e905e239edf31e2 664 PANTHER PTHR10073 3 337 5.1E-152 T 23-04-2016 VV93_RS14220 cbd5c05067d662fb2e905e239edf31e2 664 Gene3D G3DSA:3.30.565.10 1 217 2.6E-76 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS14220 cbd5c05067d662fb2e905e239edf31e2 664 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 1.5E-39 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 VV93_RS14220 cbd5c05067d662fb2e905e239edf31e2 664 SUPERFAMILY SSF55874 1 204 6.68E-53 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS14220 cbd5c05067d662fb2e905e239edf31e2 664 Pfam PF08676 MutL C terminal dimerisation domain 480 618 1.1E-30 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VV93_RS14220 cbd5c05067d662fb2e905e239edf31e2 664 Gene3D G3DSA:3.30.230.10 218 329 2.0E-39 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV93_RS14220 cbd5c05067d662fb2e905e239edf31e2 664 SMART SM00853 483 625 5.3E-19 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VV93_RS14220 cbd5c05067d662fb2e905e239edf31e2 664 SUPERFAMILY SSF118116 479 662 8.76E-38 T 23-04-2016 VV93_RS14220 cbd5c05067d662fb2e905e239edf31e2 664 SMART SM01340 212 330 1.7E-57 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 VV93_RS14220 cbd5c05067d662fb2e905e239edf31e2 664 SUPERFAMILY SSF54211 191 330 8.34E-37 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS09875 23b0e712b4468736977e8b6db58a394c 258 Gene3D G3DSA:3.20.20.150 1 257 4.3E-90 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VV93_RS09875 23b0e712b4468736977e8b6db58a394c 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 9.8E-36 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VV93_RS09875 23b0e712b4468736977e8b6db58a394c 258 SUPERFAMILY SSF51658 1 258 1.24E-84 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VV93_RS09875 23b0e712b4468736977e8b6db58a394c 258 PANTHER PTHR12110:SF12 1 258 1.0E-113 T 23-04-2016 VV93_RS09875 23b0e712b4468736977e8b6db58a394c 258 PANTHER PTHR12110 1 258 1.0E-113 T 23-04-2016 VV93_RS09875 23b0e712b4468736977e8b6db58a394c 258 PIRSF PIRSF006241 1 258 3.3E-99 T 23-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 VV93_RS09655 3126d14f67ca2e9ccac2972a59083852 822 Pfam PF00571 CBS domain 764 817 9.2E-4 T 23-04-2016 IPR000644 CBS domain VV93_RS09655 3126d14f67ca2e9ccac2972a59083852 822 Pfam PF00571 CBS domain 698 735 0.0069 T 23-04-2016 IPR000644 CBS domain VV93_RS09655 3126d14f67ca2e9ccac2972a59083852 822 SUPERFAMILY SSF55785 126 235 1.24E-14 T 23-04-2016 IPR000014 PAS domain VV93_RS09655 3126d14f67ca2e9ccac2972a59083852 822 SUPERFAMILY SSF141868 422 666 8.76E-65 T 23-04-2016 IPR001633 EAL domain VV93_RS09655 3126d14f67ca2e9ccac2972a59083852 822 Gene3D G3DSA:3.20.20.450 419 664 9.1E-66 T 23-04-2016 IPR001633 EAL domain VV93_RS09655 3126d14f67ca2e9ccac2972a59083852 822 PANTHER PTHR33121:SF10 251 694 6.2E-79 T 23-04-2016 VV93_RS09655 3126d14f67ca2e9ccac2972a59083852 822 Pfam PF00563 EAL domain 424 657 3.5E-56 T 23-04-2016 IPR001633 EAL domain VV93_RS09655 3126d14f67ca2e9ccac2972a59083852 822 PANTHER PTHR33121 251 694 6.2E-79 T 23-04-2016 VV93_RS09655 3126d14f67ca2e9ccac2972a59083852 822 Pfam PF13188 PAS domain 128 176 3.7E-5 T 23-04-2016 IPR000014 PAS domain VV93_RS09655 3126d14f67ca2e9ccac2972a59083852 822 Gene3D G3DSA:3.10.580.10 688 817 1.8E-14 T 23-04-2016 VV93_RS09655 3126d14f67ca2e9ccac2972a59083852 822 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 127 239 1.4E-7 T 23-04-2016 IPR000014 PAS domain VV93_RS09655 3126d14f67ca2e9ccac2972a59083852 822 Gene3D G3DSA:3.30.450.20 127 221 1.9E-12 T 23-04-2016 VV93_RS09655 3126d14f67ca2e9ccac2972a59083852 822 SMART SM00091 127 193 2.1E-5 T 23-04-2016 IPR000014 PAS domain VV93_RS09655 3126d14f67ca2e9ccac2972a59083852 822 Gene3D G3DSA:3.30.70.270 254 412 7.3E-7 T 23-04-2016 VV93_RS09655 3126d14f67ca2e9ccac2972a59083852 822 SUPERFAMILY SSF54631 690 817 2.02E-13 T 23-04-2016 VV93_RS09655 3126d14f67ca2e9ccac2972a59083852 822 SUPERFAMILY SSF55073 254 406 3.61E-5 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS09655 3126d14f67ca2e9ccac2972a59083852 822 SMART SM00052 415 662 5.7E-60 T 23-04-2016 IPR001633 EAL domain VV93_RS09360 40d51ce700459293dd7a7d72e869edd7 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 1.2E-61 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VV93_RS09360 40d51ce700459293dd7a7d72e869edd7 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 1.3E-97 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VV93_RS09360 40d51ce700459293dd7a7d72e869edd7 507 PANTHER PTHR30389:SF1 1 504 0.0 T 23-04-2016 VV93_RS09360 40d51ce700459293dd7a7d72e869edd7 507 SUPERFAMILY SSF117457 317 489 3.4E-63 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VV93_RS09360 40d51ce700459293dd7a7d72e869edd7 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 4.5E-50 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VV93_RS09360 40d51ce700459293dd7a7d72e869edd7 507 PIRSF PIRSF001394 1 507 1.1E-213 T 23-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 VV93_RS09360 40d51ce700459293dd7a7d72e869edd7 507 Gene3D G3DSA:3.20.130.10 303 490 7.7E-74 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VV93_RS09360 40d51ce700459293dd7a7d72e869edd7 507 PANTHER PTHR30389 1 504 0.0 T 23-04-2016 VV93_RS09360 40d51ce700459293dd7a7d72e869edd7 507 Pfam PF05683 Fumarase C-terminus 289 490 3.5E-83 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VV93_RS04445 3744441d4e0d3bfb4ccfe044420c1481 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 2.2E-116 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VV93_RS04445 3744441d4e0d3bfb4ccfe044420c1481 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.368 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VV93_RS04445 3744441d4e0d3bfb4ccfe044420c1481 283 SUPERFAMILY SSF51569 2 278 7.88E-105 T 23-04-2016 VV93_RS04445 3744441d4e0d3bfb4ccfe044420c1481 283 PANTHER PTHR21057:SF6 1 283 2.4E-223 T 23-04-2016 VV93_RS04445 3744441d4e0d3bfb4ccfe044420c1481 283 Gene3D G3DSA:3.20.20.70 16 278 1.3E-106 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS04445 3744441d4e0d3bfb4ccfe044420c1481 283 Pfam PF00793 DAHP synthetase I family 10 275 1.7E-69 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VV93_RS04445 3744441d4e0d3bfb4ccfe044420c1481 283 PANTHER PTHR21057 1 283 2.4E-223 T 23-04-2016 VV93_RS12465 f616ea71206e1830dc6d9336140e6b9f 148 SUPERFAMILY SSF57716 108 146 5.84E-10 T 23-04-2016 VV93_RS12465 f616ea71206e1830dc6d9336140e6b9f 148 SUPERFAMILY SSF109635 7 107 3.01E-37 T 23-04-2016 VV93_RS12465 f616ea71206e1830dc6d9336140e6b9f 148 PANTHER PTHR33823 5 146 1.5E-69 T 23-04-2016 VV93_RS12465 f616ea71206e1830dc6d9336140e6b9f 148 PANTHER PTHR33823:SF2 5 146 1.5E-69 T 23-04-2016 VV93_RS12465 f616ea71206e1830dc6d9336140e6b9f 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 23-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VV93_RS12465 f616ea71206e1830dc6d9336140e6b9f 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 9.7E-5 T 23-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VV93_RS12465 f616ea71206e1830dc6d9336140e6b9f 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 9.7E-5 T 23-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VV93_RS12465 f616ea71206e1830dc6d9336140e6b9f 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 3.6E-10 T 23-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 VV93_RS12465 f616ea71206e1830dc6d9336140e6b9f 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 9.9E-52 T 23-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VV93_RS12465 f616ea71206e1830dc6d9336140e6b9f 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 30.218 T 23-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VV93_RS12505 654c4411e1c2662337206f3d1388c88a 556 Pfam PF00916 Sulfate permease family 11 376 1.4E-84 T 23-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VV93_RS12505 654c4411e1c2662337206f3d1388c88a 556 Gene3D G3DSA:3.30.750.24 439 527 4.2E-12 T 23-04-2016 IPR002645 STAS domain VV93_RS12505 654c4411e1c2662337206f3d1388c88a 556 PANTHER PTHR11814:SF97 10 550 1.8E-304 T 23-04-2016 VV93_RS12505 654c4411e1c2662337206f3d1388c88a 556 SUPERFAMILY SSF52091 439 541 4.32E-13 T 23-04-2016 IPR002645 STAS domain VV93_RS12505 654c4411e1c2662337206f3d1388c88a 556 PANTHER PTHR11814 10 550 1.8E-304 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 VV93_RS12505 654c4411e1c2662337206f3d1388c88a 556 Pfam PF01740 STAS domain 440 533 1.1E-14 T 23-04-2016 IPR002645 STAS domain VV93_RS00575 07e0665d46eca0b50609509aab6d6acc 285 SUPERFAMILY SSF88659 199 281 8.78E-19 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS00575 07e0665d46eca0b50609509aab6d6acc 285 Gene3D G3DSA:1.10.10.10 225 280 3.6E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS00575 07e0665d46eca0b50609509aab6d6acc 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 53.016 T 23-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 VV93_RS00575 07e0665d46eca0b50609509aab6d6acc 285 Pfam PF04545 Sigma-70, region 4 229 279 1.0E-15 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS00575 07e0665d46eca0b50609509aab6d6acc 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 1.5E-18 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS00575 07e0665d46eca0b50609509aab6d6acc 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 1.5E-18 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS00575 07e0665d46eca0b50609509aab6d6acc 285 PRINTS PR00046 Major sigma-70 factor signature 252 267 1.5E-18 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS00575 07e0665d46eca0b50609509aab6d6acc 285 PRINTS PR00046 Major sigma-70 factor signature 267 278 1.5E-18 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS00575 07e0665d46eca0b50609509aab6d6acc 285 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 6.9E-7 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS00575 07e0665d46eca0b50609509aab6d6acc 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS00575 07e0665d46eca0b50609509aab6d6acc 285 Pfam PF04542 Sigma-70 region 2 53 122 2.9E-17 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS00575 07e0665d46eca0b50609509aab6d6acc 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 279 5.3E-34 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS00575 07e0665d46eca0b50609509aab6d6acc 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 282 7.9E-126 T 23-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 VV93_RS00575 07e0665d46eca0b50609509aab6d6acc 285 Gene3D G3DSA:1.10.601.10 12 122 1.7E-34 T 23-04-2016 VV93_RS00575 07e0665d46eca0b50609509aab6d6acc 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS00575 07e0665d46eca0b50609509aab6d6acc 285 PANTHER PTHR30376 2 285 1.7E-124 T 23-04-2016 VV93_RS00575 07e0665d46eca0b50609509aab6d6acc 285 SUPERFAMILY SSF88946 11 122 2.22E-39 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS08305 38e66e47aeb1b5858e7dfbb971b6a9c6 310 ProSitePatterns PS01043 Transposases, IS30 family, signature. 254 270 - T 23-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV93_RS08305 38e66e47aeb1b5858e7dfbb971b6a9c6 310 Gene3D G3DSA:3.30.420.10 163 306 2.3E-14 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08305 38e66e47aeb1b5858e7dfbb971b6a9c6 310 Pfam PF13936 Helix-turn-helix domain 1 33 2.2E-10 T 23-04-2016 IPR025246 Transposase IS30-like HTH domain VV93_RS08305 38e66e47aeb1b5858e7dfbb971b6a9c6 310 PANTHER PTHR10948 1 306 2.1E-73 T 23-04-2016 VV93_RS08305 38e66e47aeb1b5858e7dfbb971b6a9c6 310 Gene3D G3DSA:1.10.10.60 2 31 2.3E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS08305 38e66e47aeb1b5858e7dfbb971b6a9c6 310 Pfam PF00665 Integrase core domain 160 267 6.0E-13 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VV93_RS08305 38e66e47aeb1b5858e7dfbb971b6a9c6 310 SUPERFAMILY SSF53098 163 307 1.64E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS02780 dbeda4eb809436a2573eb14fb9e6391b 287 PIRSF PIRSF005917 1 287 1.0E-108 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS02780 dbeda4eb809436a2573eb14fb9e6391b 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 3.0E-102 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS02780 dbeda4eb809436a2573eb14fb9e6391b 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 2.0E-28 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VV93_RS02780 dbeda4eb809436a2573eb14fb9e6391b 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.608 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS02780 dbeda4eb809436a2573eb14fb9e6391b 287 Gene3D G3DSA:3.30.950.10 122 235 1.1E-44 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 VV93_RS02780 dbeda4eb809436a2573eb14fb9e6391b 287 PANTHER PTHR21091:SF18 9 253 2.2E-93 T 23-04-2016 VV93_RS02780 dbeda4eb809436a2573eb14fb9e6391b 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 23-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS02780 dbeda4eb809436a2573eb14fb9e6391b 287 SUPERFAMILY SSF53790 13 232 5.63E-86 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VV93_RS02780 dbeda4eb809436a2573eb14fb9e6391b 287 PANTHER PTHR21091 9 253 2.2E-93 T 23-04-2016 VV93_RS02780 dbeda4eb809436a2573eb14fb9e6391b 287 Gene3D G3DSA:3.40.1010.10 13 121 8.8E-16 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 VV93_RS04395 6e72595684e0a7cc7c62c67566fab663 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.0E-168 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 VV93_RS04395 6e72595684e0a7cc7c62c67566fab663 363 PIRSF PIRSF006641 1 363 1.0E-157 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 VV93_RS04395 6e72595684e0a7cc7c62c67566fab663 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.3E-39 T 23-04-2016 IPR013029 Domain of unknown function DUF933 VV93_RS04395 6e72595684e0a7cc7c62c67566fab663 363 SUPERFAMILY SSF81271 279 360 1.24E-36 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VV93_RS04395 6e72595684e0a7cc7c62c67566fab663 363 Gene3D G3DSA:3.10.20.30 268 363 6.4E-50 T 23-04-2016 IPR012675 Beta-grasp domain VV93_RS04395 6e72595684e0a7cc7c62c67566fab663 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.169 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 VV93_RS04395 6e72595684e0a7cc7c62c67566fab663 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.4E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS04395 6e72595684e0a7cc7c62c67566fab663 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.4E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS04395 6e72595684e0a7cc7c62c67566fab663 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.4E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS04395 6e72595684e0a7cc7c62c67566fab663 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS04395 6e72595684e0a7cc7c62c67566fab663 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 1.7E-21 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS04395 6e72595684e0a7cc7c62c67566fab663 363 SUPERFAMILY SSF52540 3 301 1.14E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04395 6e72595684e0a7cc7c62c67566fab663 363 PANTHER PTHR23305 1 363 1.6E-212 T 23-04-2016 VV93_RS04395 6e72595684e0a7cc7c62c67566fab663 363 Gene3D G3DSA:1.10.150.300 132 200 3.8E-26 T 23-04-2016 IPR023192 TGS-like domain VV93_RS04395 6e72595684e0a7cc7c62c67566fab663 363 Gene3D G3DSA:3.40.50.300 201 267 4.0E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04395 6e72595684e0a7cc7c62c67566fab663 363 Gene3D G3DSA:3.40.50.300 4 131 4.0E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06800 d95b342b3bc06637937050561ccbba78 530 Gene3D G3DSA:3.30.450.20 147 263 5.4E-14 T 23-04-2016 VV93_RS06800 d95b342b3bc06637937050561ccbba78 530 PANTHER PTHR10799 388 522 1.2E-29 T 23-04-2016 VV93_RS06800 d95b342b3bc06637937050561ccbba78 530 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 363 521 1.6E-39 T 23-04-2016 IPR000160 GGDEF domain VV93_RS06800 d95b342b3bc06637937050561ccbba78 530 Pfam PF17201 Cache 3/Cache 2 fusion domain 170 262 6.3E-8 T 23-04-2016 IPR033462 Cache 3/Cache 2 fusion domain VV93_RS06800 d95b342b3bc06637937050561ccbba78 530 Pfam PF00672 HAMP domain 267 336 2.9E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS06800 d95b342b3bc06637937050561ccbba78 530 SUPERFAMILY SSF55073 371 522 1.37E-44 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS06800 d95b342b3bc06637937050561ccbba78 530 SMART SM00267 353 523 7.2E-53 T 23-04-2016 IPR000160 GGDEF domain VV93_RS06800 d95b342b3bc06637937050561ccbba78 530 Pfam PF00990 Diguanylate cyclase, GGDEF domain 365 518 3.5E-44 T 23-04-2016 IPR000160 GGDEF domain VV93_RS06800 d95b342b3bc06637937050561ccbba78 530 Gene3D G3DSA:3.30.70.270 367 526 6.0E-51 T 23-04-2016 VV93_RS14035 779865bbb20783bcab07be1ec311974a 240 Pfam PF08348 YheO-like PAS domain 31 139 5.6E-35 T 23-04-2016 IPR013559 YheO-like VV93_RS14035 779865bbb20783bcab07be1ec311974a 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 8.0E-62 T 23-04-2016 IPR013559 YheO-like VV93_RS14035 779865bbb20783bcab07be1ec311974a 240 PANTHER PTHR35568:SF3 14 240 1.8E-169 T 23-04-2016 VV93_RS14035 779865bbb20783bcab07be1ec311974a 240 PANTHER PTHR35568 14 240 1.8E-169 T 23-04-2016 VV93_RS14035 779865bbb20783bcab07be1ec311974a 240 Pfam PF13309 HTH domain 174 231 5.1E-18 T 23-04-2016 VV93_RS18010 c77e5cbf74d8fabd074cc6b082785be2 382 SUPERFAMILY SSF51395 47 381 1.46E-118 T 23-04-2016 VV93_RS18010 c77e5cbf74d8fabd074cc6b082785be2 382 PANTHER PTHR11938:SF1 1 381 2.7E-186 T 23-04-2016 VV93_RS18010 c77e5cbf74d8fabd074cc6b082785be2 382 Gene3D G3DSA:3.60.20.10 1 40 2.1E-5 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VV93_RS18010 c77e5cbf74d8fabd074cc6b082785be2 382 Pfam PF04898 Glutamate synthase central domain 58 342 1.0E-116 T 23-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 VV93_RS18010 c77e5cbf74d8fabd074cc6b082785be2 382 PANTHER PTHR11938 1 381 2.7E-186 T 23-04-2016 VV93_RS18010 c77e5cbf74d8fabd074cc6b082785be2 382 Gene3D G3DSA:3.20.20.70 41 380 1.2E-108 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS09680 8891a4ffdd8b590b65996e9abecaec25 587 SUPERFAMILY SSF52091 446 536 3.73E-13 T 23-04-2016 IPR002645 STAS domain VV93_RS09680 8891a4ffdd8b590b65996e9abecaec25 587 PANTHER PTHR11814:SF55 6 535 4.1E-144 T 23-04-2016 VV93_RS09680 8891a4ffdd8b590b65996e9abecaec25 587 Gene3D G3DSA:3.30.750.24 446 536 4.0E-12 T 23-04-2016 IPR002645 STAS domain VV93_RS09680 8891a4ffdd8b590b65996e9abecaec25 587 PANTHER PTHR11814 6 535 4.1E-144 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 VV93_RS09680 8891a4ffdd8b590b65996e9abecaec25 587 Pfam PF01740 STAS domain 447 539 1.6E-15 T 23-04-2016 IPR002645 STAS domain VV93_RS09680 8891a4ffdd8b590b65996e9abecaec25 587 Pfam PF00916 Sulfate permease family 24 383 4.4E-81 T 23-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VV93_RS06230 f4d64328eee3b5070106d260b7b5cca5 227 PANTHER PTHR35369:SF1 1 157 8.2E-18 T 23-04-2016 VV93_RS06230 f4d64328eee3b5070106d260b7b5cca5 227 SUPERFAMILY SSF52540 47 157 1.06E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06230 f4d64328eee3b5070106d260b7b5cca5 227 PANTHER PTHR35369 1 157 8.2E-18 T 23-04-2016 VV93_RS06230 f4d64328eee3b5070106d260b7b5cca5 227 PIRSF PIRSF037290 1 227 4.1E-80 T 23-04-2016 IPR017166 Uncharacterised conserved protein UCP037290 VV93_RS06230 f4d64328eee3b5070106d260b7b5cca5 227 Gene3D G3DSA:3.40.50.300 54 157 7.7E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06230 f4d64328eee3b5070106d260b7b5cca5 227 Gene3D G3DSA:3.40.50.300 26 53 9.4E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01745 f6e377bbd245d2de1a8a21d0a9c72e4c 215 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 8 210 7.9E-55 T 23-04-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like VV93_RS01745 f6e377bbd245d2de1a8a21d0a9c72e4c 215 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 154 6.5E-6 T 23-04-2016 IPR001451 Hexapeptide repeat VV93_RS01745 f6e377bbd245d2de1a8a21d0a9c72e4c 215 Gene3D G3DSA:3.40.50.20 6 69 3.6E-14 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS01745 f6e377bbd245d2de1a8a21d0a9c72e4c 215 SUPERFAMILY SSF51161 8 213 4.71E-38 T 23-04-2016 IPR011004 Trimeric LpxA-like VV93_RS01745 f6e377bbd245d2de1a8a21d0a9c72e4c 215 PANTHER PTHR23416 104 214 1.1E-17 T 23-04-2016 VV93_RS01745 f6e377bbd245d2de1a8a21d0a9c72e4c 215 Gene3D G3DSA:2.160.10.10 70 214 4.4E-30 T 23-04-2016 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 602 627 1.0E-4 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 712 749 4.3E-9 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 Gene3D G3DSA:2.70.20.10 219 340 4.5E-34 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 Gene3D G3DSA:2.70.20.10 344 478 6.6E-32 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 639 1.2E-246 T 23-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 SMART SM00436 139 227 1.3E-47 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 Gene3D G3DSA:3.30.65.10 711 747 2.1E-9 T 23-04-2016 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 Gene3D G3DSA:3.30.65.10 748 810 1.2E-24 T 23-04-2016 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 Gene3D G3DSA:3.30.65.10 601 628 9.9E-12 T 23-04-2016 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 Pfam PF01751 Toprim domain 5 148 4.9E-32 T 23-04-2016 IPR006171 Toprim domain VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 Gene3D G3DSA:3.40.50.140 1 169 2.6E-55 T 23-04-2016 IPR006171 Toprim domain VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 Pfam PF01131 DNA topoisomerase 163 569 6.8E-128 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 SMART SM00493 3 138 9.0E-37 T 23-04-2016 IPR006171 Toprim domain VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 Gene3D G3DSA:1.10.460.10 170 217 9.1E-59 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 Gene3D G3DSA:1.10.460.10 479 600 9.1E-59 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 PANTHER PTHR11390:SF27 1 37 0.0 T 23-04-2016 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 PANTHER PTHR11390:SF27 74 780 0.0 T 23-04-2016 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 Gene3D G3DSA:2.20.25.10 812 869 6.4E-29 T 23-04-2016 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 PANTHER PTHR11390 1 37 0.0 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 PANTHER PTHR11390 74 780 0.0 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 Pfam PF08272 Topoisomerase I zinc-ribbon-like 828 868 9.1E-19 T 23-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 Pfam PF08272 Topoisomerase I zinc-ribbon-like 761 797 1.1E-10 T 23-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 727 53.479 T 23-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 SUPERFAMILY SSF56712 3 614 7.06E-198 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 SUPERFAMILY SSF57783 813 869 3.57E-21 T 23-04-2016 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 SMART SM00437 278 532 2.9E-119 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 1.89E-35 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 112 125 1.89E-35 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 495 509 1.89E-35 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 1.89E-35 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 1.89E-35 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 SUPERFAMILY SSF57783 748 811 2.72E-18 T 23-04-2016 VV93_RS10240 47d2b1ac7568145eab2c78a22e7d81a8 874 SUPERFAMILY SSF57783 704 746 2.21E-5 T 23-04-2016 VV93_RS01990 4bad2250fc4cba849228a2b1059a9a52 207 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.171 T 23-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 VV93_RS01990 4bad2250fc4cba849228a2b1059a9a52 207 SUPERFAMILY SSF52540 25 198 6.13E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01990 4bad2250fc4cba849228a2b1059a9a52 207 PANTHER PTHR11055 1 204 1.9E-129 T 23-04-2016 VV93_RS01990 4bad2250fc4cba849228a2b1059a9a52 207 Pfam PF01583 Adenylylsulphate kinase 31 182 6.8E-72 T 23-04-2016 VV93_RS01990 4bad2250fc4cba849228a2b1059a9a52 207 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 198 3.0E-83 T 23-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 VV93_RS01990 4bad2250fc4cba849228a2b1059a9a52 207 Gene3D G3DSA:3.40.50.300 9 205 9.7E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07340 b8e9fb703582ed1cd8171ada0fb80013 231 SMART SM00345 24 82 2.3E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV93_RS07340 b8e9fb703582ed1cd8171ada0fb80013 231 PANTHER PTHR11751:SF426 17 108 1.4E-54 T 23-04-2016 VV93_RS07340 b8e9fb703582ed1cd8171ada0fb80013 231 Gene3D G3DSA:1.20.120.530 85 228 1.5E-29 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VV93_RS07340 b8e9fb703582ed1cd8171ada0fb80013 231 SMART SM00895 92 219 8.8E-21 T 23-04-2016 IPR011711 GntR, C-terminal VV93_RS07340 b8e9fb703582ed1cd8171ada0fb80013 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 1.4E-15 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV93_RS07340 b8e9fb703582ed1cd8171ada0fb80013 231 SUPERFAMILY SSF48008 88 225 2.2E-23 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VV93_RS07340 b8e9fb703582ed1cd8171ada0fb80013 231 SUPERFAMILY SSF46785 17 109 1.9E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS07340 b8e9fb703582ed1cd8171ada0fb80013 231 Pfam PF07729 FCD domain 92 217 1.5E-24 T 23-04-2016 IPR011711 GntR, C-terminal VV93_RS07340 b8e9fb703582ed1cd8171ada0fb80013 231 Gene3D G3DSA:1.10.10.10 14 82 1.1E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS07340 b8e9fb703582ed1cd8171ada0fb80013 231 PANTHER PTHR11751 17 108 1.4E-54 T 23-04-2016 VV93_RS10360 bfd5084dc4b547844514224b1175d092 256 Gene3D G3DSA:3.40.190.10 136 209 2.5E-24 T 23-04-2016 VV93_RS10360 bfd5084dc4b547844514224b1175d092 256 PANTHER PTHR18966 16 249 3.3E-55 T 23-04-2016 VV93_RS10360 bfd5084dc4b547844514224b1175d092 256 Gene3D G3DSA:3.40.190.10 7 135 2.0E-44 T 23-04-2016 VV93_RS10360 bfd5084dc4b547844514224b1175d092 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 250 4.0E-61 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV93_RS10360 bfd5084dc4b547844514224b1175d092 256 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 7 249 3.9E-82 T 23-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 VV93_RS10360 bfd5084dc4b547844514224b1175d092 256 SMART SM00079 26 251 1.6E-4 T 23-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VV93_RS10360 bfd5084dc4b547844514224b1175d092 256 PANTHER PTHR18966:SF152 16 249 3.3E-55 T 23-04-2016 VV93_RS10360 bfd5084dc4b547844514224b1175d092 256 SMART SM00062 26 252 1.0E-69 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV93_RS10360 bfd5084dc4b547844514224b1175d092 256 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 23-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 VV93_RS10360 bfd5084dc4b547844514224b1175d092 256 SUPERFAMILY SSF53850 1 253 3.45E-71 T 23-04-2016 VV93_RS13580 bffe5fdca954a77788e5577deb88e025 179 Pfam PF00436 Single-strand binding protein family 6 105 1.1E-42 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 VV93_RS13580 bffe5fdca954a77788e5577deb88e025 179 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 179 2.3E-62 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VV93_RS13580 bffe5fdca954a77788e5577deb88e025 179 PANTHER PTHR10302 1 179 2.1E-56 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VV93_RS13580 bffe5fdca954a77788e5577deb88e025 179 SUPERFAMILY SSF50249 4 179 1.3E-60 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS13580 bffe5fdca954a77788e5577deb88e025 179 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 38.881 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VV93_RS13580 bffe5fdca954a77788e5577deb88e025 179 Gene3D G3DSA:2.40.50.140 4 179 1.3E-55 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS13580 bffe5fdca954a77788e5577deb88e025 179 PANTHER PTHR10302:SF0 1 179 2.1E-56 T 23-04-2016 VV93_RS04450 5d58fe05c372e4cd7ba1259ab9486cfc 553 PRINTS PR01607 Apyrase family signature 211 228 1.3E-51 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS04450 5d58fe05c372e4cd7ba1259ab9486cfc 553 PRINTS PR01607 Apyrase family signature 36 54 1.3E-51 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS04450 5d58fe05c372e4cd7ba1259ab9486cfc 553 PRINTS PR01607 Apyrase family signature 487 506 1.3E-51 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS04450 5d58fe05c372e4cd7ba1259ab9486cfc 553 PRINTS PR01607 Apyrase family signature 420 443 1.3E-51 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS04450 5d58fe05c372e4cd7ba1259ab9486cfc 553 PRINTS PR01607 Apyrase family signature 242 265 1.3E-51 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS04450 5d58fe05c372e4cd7ba1259ab9486cfc 553 PRINTS PR01607 Apyrase family signature 287 307 1.3E-51 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS04450 5d58fe05c372e4cd7ba1259ab9486cfc 553 PANTHER PTHR11575 1 552 8.4E-241 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS04450 5d58fe05c372e4cd7ba1259ab9486cfc 553 SUPERFAMILY SSF56300 31 364 3.8E-97 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like VV93_RS04450 5d58fe05c372e4cd7ba1259ab9486cfc 553 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 23-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VV93_RS04450 5d58fe05c372e4cd7ba1259ab9486cfc 553 Gene3D G3DSA:3.90.780.10 367 542 5.2E-51 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VV93_RS04450 5d58fe05c372e4cd7ba1259ab9486cfc 553 Gene3D G3DSA:3.60.21.10 32 364 2.0E-100 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like VV93_RS04450 5d58fe05c372e4cd7ba1259ab9486cfc 553 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 7.8E-23 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VV93_RS04450 5d58fe05c372e4cd7ba1259ab9486cfc 553 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 23-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VV93_RS04450 5d58fe05c372e4cd7ba1259ab9486cfc 553 PANTHER PTHR11575:SF27 1 552 8.4E-241 T 23-04-2016 VV93_RS04450 5d58fe05c372e4cd7ba1259ab9486cfc 553 SUPERFAMILY SSF55816 366 542 2.88E-51 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VV93_RS04450 5d58fe05c372e4cd7ba1259ab9486cfc 553 Pfam PF02872 5'-nucleotidase, C-terminal domain 367 512 1.3E-33 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VV93_RS09570 af2411921abed4f7cdbe9012d5624d91 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.0E-20 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV93_RS09570 af2411921abed4f7cdbe9012d5624d91 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 1.8E-114 T 23-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VV93_RS09570 af2411921abed4f7cdbe9012d5624d91 279 SMART SM00345 12 71 1.6E-22 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV93_RS09570 af2411921abed4f7cdbe9012d5624d91 279 Pfam PF07840 FadR C-terminal domain 72 274 3.4E-67 T 23-04-2016 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 VV93_RS09570 af2411921abed4f7cdbe9012d5624d91 279 PANTHER PTHR11751:SF402 13 97 5.7E-54 T 23-04-2016 VV93_RS09570 af2411921abed4f7cdbe9012d5624d91 279 PANTHER PTHR11751 13 97 5.7E-54 T 23-04-2016 VV93_RS09570 af2411921abed4f7cdbe9012d5624d91 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV93_RS09570 af2411921abed4f7cdbe9012d5624d91 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV93_RS09570 af2411921abed4f7cdbe9012d5624d91 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 138.194 T 23-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VV93_RS09570 af2411921abed4f7cdbe9012d5624d91 279 SUPERFAMILY SSF48008 178 270 7.59E-57 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VV93_RS09570 af2411921abed4f7cdbe9012d5624d91 279 SUPERFAMILY SSF48008 79 137 7.59E-57 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VV93_RS09570 af2411921abed4f7cdbe9012d5624d91 279 Gene3D G3DSA:1.10.10.10 12 74 5.2E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS09570 af2411921abed4f7cdbe9012d5624d91 279 SUPERFAMILY SSF46785 12 74 9.23E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS09570 af2411921abed4f7cdbe9012d5624d91 279 Gene3D G3DSA:1.20.120.530 178 278 2.3E-64 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VV93_RS09570 af2411921abed4f7cdbe9012d5624d91 279 Gene3D G3DSA:1.20.120.530 80 137 2.3E-64 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VV93_RS20245 a16cd7b009f00f781fe58cea9dcaaf09 269 SUPERFAMILY SSF55073 126 265 3.14E-28 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS20245 a16cd7b009f00f781fe58cea9dcaaf09 269 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 118 266 2.5E-28 T 23-04-2016 IPR000160 GGDEF domain VV93_RS20245 a16cd7b009f00f781fe58cea9dcaaf09 269 SMART SM00267 110 269 5.2E-23 T 23-04-2016 IPR000160 GGDEF domain VV93_RS20245 a16cd7b009f00f781fe58cea9dcaaf09 269 Pfam PF00990 Diguanylate cyclase, GGDEF domain 122 266 2.7E-27 T 23-04-2016 IPR000160 GGDEF domain VV93_RS20245 a16cd7b009f00f781fe58cea9dcaaf09 269 Gene3D G3DSA:3.30.70.270 122 266 2.2E-31 T 23-04-2016 VV93_RS05210 179360abc9098c747ef502cc50807d66 285 PANTHER PTHR32243:SF23 1 285 1.4E-130 T 23-04-2016 VV93_RS05210 179360abc9098c747ef502cc50807d66 285 PANTHER PTHR32243 1 285 1.4E-130 T 23-04-2016 VV93_RS05210 179360abc9098c747ef502cc50807d66 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 278 2.0E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS05210 179360abc9098c747ef502cc50807d66 285 Gene3D G3DSA:1.10.3720.10 6 270 2.6E-55 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS05210 179360abc9098c747ef502cc50807d66 285 SUPERFAMILY SSF161098 8 285 2.9E-65 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 2.2E-150 T 23-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 73.511 T 23-04-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 Gene3D G3DSA:3.40.50.300 485 608 8.9E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 SMART SM00490 519 603 2.7E-17 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 Gene3D G3DSA:3.40.50.300 164 318 4.2E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 1.8E-15 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 PANTHER PTHR10799:SF610 800 841 2.4E-253 T 23-04-2016 VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 PANTHER PTHR10799:SF610 150 354 2.4E-253 T 23-04-2016 VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 PANTHER PTHR10799:SF610 874 950 2.4E-253 T 23-04-2016 VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 PANTHER PTHR10799:SF610 1 9 2.4E-253 T 23-04-2016 VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 PANTHER PTHR10799:SF610 402 695 2.4E-253 T 23-04-2016 VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 SMART SM00487 150 346 1.1E-12 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 PANTHER PTHR10799 800 841 2.4E-253 T 23-04-2016 VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 PANTHER PTHR10799 150 354 2.4E-253 T 23-04-2016 VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 PANTHER PTHR10799 874 950 2.4E-253 T 23-04-2016 VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 PANTHER PTHR10799 1 9 2.4E-253 T 23-04-2016 VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 PANTHER PTHR10799 402 695 2.4E-253 T 23-04-2016 VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 SUPERFAMILY SSF52540 118 378 2.4E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 Pfam PF00176 SNF2 family N-terminal domain 174 342 2.4E-14 T 23-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 SUPERFAMILY SSF52540 482 651 2.66E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13445 2d97b38caebd90b480d6551031a51bae 969 SUPERFAMILY SSF52540 273 337 2.66E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06885 33180133d7f05cce529a1084dd58abbd 374 SUPERFAMILY SSF159245 56 374 6.93E-94 T 23-04-2016 VV93_RS06885 33180133d7f05cce529a1084dd58abbd 374 Pfam PF07143 CrtC N-terminal lipocalin domain 79 248 2.4E-44 T 23-04-2016 IPR010791 AttH domain VV93_RS06885 33180133d7f05cce529a1084dd58abbd 374 Pfam PF17186 Lipocalin-like domain 252 374 3.4E-33 T 23-04-2016 IPR033451 AttH, lipocalin-like domain VV93_RS06885 33180133d7f05cce529a1084dd58abbd 374 Gene3D G3DSA:2.40.370.10 253 374 5.1E-35 T 23-04-2016 IPR023374 AttH-like domain VV93_RS06885 33180133d7f05cce529a1084dd58abbd 374 Gene3D G3DSA:2.40.370.10 67 250 2.7E-58 T 23-04-2016 IPR023374 AttH-like domain VV93_RS06885 33180133d7f05cce529a1084dd58abbd 374 PANTHER PTHR38591 2 374 2.1E-85 T 23-04-2016 VV93_RS14450 b105bd89f91e36351fa9bb4fcd252f1a 227 Gene3D G3DSA:1.10.10.10 125 225 1.0E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS14450 b105bd89f91e36351fa9bb4fcd252f1a 227 SUPERFAMILY SSF46894 125 225 1.33E-23 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV93_RS14450 b105bd89f91e36351fa9bb4fcd252f1a 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 224 6.3E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS14450 b105bd89f91e36351fa9bb4fcd252f1a 227 Gene3D G3DSA:3.40.50.2300 1 122 2.2E-39 T 23-04-2016 VV93_RS14450 b105bd89f91e36351fa9bb4fcd252f1a 227 PANTHER PTHR26402 2 224 4.9E-80 T 23-04-2016 VV93_RS14450 b105bd89f91e36351fa9bb4fcd252f1a 227 PANTHER PTHR26402:SF614 2 224 4.9E-80 T 23-04-2016 VV93_RS14450 b105bd89f91e36351fa9bb4fcd252f1a 227 SUPERFAMILY SSF52172 1 123 3.27E-39 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS14450 b105bd89f91e36351fa9bb4fcd252f1a 227 Pfam PF00072 Response regulator receiver domain 4 112 7.0E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS14450 b105bd89f91e36351fa9bb4fcd252f1a 227 SMART SM00448 2 111 1.0E-44 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS14450 b105bd89f91e36351fa9bb4fcd252f1a 227 SMART SM00862 148 224 1.8E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS10205 e17eb14391d609dd55ca3d207e2cbc43 334 Gene3D G3DSA:3.40.50.2300 175 309 3.0E-55 T 23-04-2016 VV93_RS10205 e17eb14391d609dd55ca3d207e2cbc43 334 SUPERFAMILY SSF47413 1 59 8.61E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS10205 e17eb14391d609dd55ca3d207e2cbc43 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.6E-21 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS10205 e17eb14391d609dd55ca3d207e2cbc43 334 SUPERFAMILY SSF53822 60 331 1.88E-95 T 23-04-2016 IPR028082 Periplasmic binding protein-like I VV93_RS10205 e17eb14391d609dd55ca3d207e2cbc43 334 PANTHER PTHR30146:SF38 1 334 6.9E-163 T 23-04-2016 VV93_RS10205 e17eb14391d609dd55ca3d207e2cbc43 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 4.4E-45 T 23-04-2016 VV93_RS10205 e17eb14391d609dd55ca3d207e2cbc43 334 SMART SM00354 1 71 2.9E-38 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS10205 e17eb14391d609dd55ca3d207e2cbc43 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 62.684 T 23-04-2016 IPR023588 Transcription regulator HTH, PurR GO:0006355 UniPathway: UPA00488 VV93_RS10205 e17eb14391d609dd55ca3d207e2cbc43 334 Gene3D G3DSA:3.40.50.2300 54 174 3.7E-45 T 23-04-2016 VV93_RS10205 e17eb14391d609dd55ca3d207e2cbc43 334 PANTHER PTHR30146 1 334 6.9E-163 T 23-04-2016 VV93_RS10205 e17eb14391d609dd55ca3d207e2cbc43 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS10205 e17eb14391d609dd55ca3d207e2cbc43 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS10205 e17eb14391d609dd55ca3d207e2cbc43 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS10205 e17eb14391d609dd55ca3d207e2cbc43 334 Gene3D G3DSA:1.10.260.40 2 53 1.1E-25 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 SUPERFAMILY SSF55190 2 96 5.89E-22 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 SMART SM01016 5 87 2.2E-28 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 SMART SM00836 461 577 2.1E-41 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 PANTHER PTHR11956:SF1 1 577 4.7E-263 T 23-04-2016 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 Gene3D G3DSA:3.30.1360.70 2 105 3.1E-34 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 PANTHER PTHR11956 1 577 4.7E-263 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 1.6E-162 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 3.8E-199 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 Gene3D G3DSA:1.10.730.10 455 577 2.5E-38 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 3.0E-20 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 SUPERFAMILY SSF52374 111 454 2.22E-93 T 23-04-2016 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 SUPERFAMILY SSF47323 455 577 1.77E-35 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 Gene3D G3DSA:3.40.50.620 110 454 1.1E-113 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.132 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VV93_RS04965 cdc91226a37a3415e7b64362a9e2d732 577 Pfam PF05746 DALR anticodon binding domain 461 577 3.6E-36 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VV93_RS13755 302fc6bbfab974dd8fb40eabeeabc2b5 464 Gene3D G3DSA:1.10.860.10 20 122 3.1E-40 T 23-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VV93_RS13755 302fc6bbfab974dd8fb40eabeeabc2b5 464 SUPERFAMILY SSF52540 197 268 1.24E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13755 302fc6bbfab974dd8fb40eabeeabc2b5 464 SUPERFAMILY SSF52540 295 448 1.24E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13755 302fc6bbfab974dd8fb40eabeeabc2b5 464 Gene3D G3DSA:3.40.50.300 187 457 5.8E-105 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13755 302fc6bbfab974dd8fb40eabeeabc2b5 464 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 3.5E-37 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 VV93_RS13755 302fc6bbfab974dd8fb40eabeeabc2b5 464 PANTHER PTHR30153 4 464 1.0E-223 T 23-04-2016 VV93_RS13755 302fc6bbfab974dd8fb40eabeeabc2b5 464 SUPERFAMILY SSF48024 18 129 6.02E-39 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 VV93_RS13755 302fc6bbfab974dd8fb40eabeeabc2b5 464 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 457 1.2E-176 T 23-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 VV93_RS13755 302fc6bbfab974dd8fb40eabeeabc2b5 464 Pfam PF03796 DnaB-like helicase C terminal domain 199 455 9.1E-115 T 23-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 VV93_RS10450 dc0069a966854cfb1cd92790b8f4833e 583 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS10450 dc0069a966854cfb1cd92790b8f4833e 583 SUPERFAMILY SSF90123 14 327 9.55E-74 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VV93_RS10450 dc0069a966854cfb1cd92790b8f4833e 583 SMART SM00382 368 555 3.9E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS10450 dc0069a966854cfb1cd92790b8f4833e 583 SUPERFAMILY SSF52540 332 580 1.57E-93 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10450 dc0069a966854cfb1cd92790b8f4833e 583 PANTHER PTHR24221:SF188 6 582 0.0 T 23-04-2016 VV93_RS10450 dc0069a966854cfb1cd92790b8f4833e 583 Pfam PF00664 ABC transporter transmembrane region 28 293 1.5E-55 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VV93_RS10450 dc0069a966854cfb1cd92790b8f4833e 583 Pfam PF00005 ABC transporter 359 509 2.3E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS10450 dc0069a966854cfb1cd92790b8f4833e 583 Gene3D G3DSA:1.20.1560.10 13 327 1.2E-72 T 23-04-2016 VV93_RS10450 dc0069a966854cfb1cd92790b8f4833e 583 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 6.5E-241 T 23-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 VV93_RS10450 dc0069a966854cfb1cd92790b8f4833e 583 PANTHER PTHR24221 6 582 0.0 T 23-04-2016 VV93_RS10450 dc0069a966854cfb1cd92790b8f4833e 583 Gene3D G3DSA:3.40.50.300 342 574 8.8E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12605 2dacc31f60680994300ac18093cebc3c 82 PANTHER PTHR12919 1 78 6.1E-37 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS12605 2dacc31f60680994300ac18093cebc3c 82 Gene3D G3DSA:3.30.1320.10 1 79 9.5E-32 T 23-04-2016 IPR023803 Ribosomal protein S16 domain VV93_RS12605 2dacc31f60680994300ac18093cebc3c 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.0E-26 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS12605 2dacc31f60680994300ac18093cebc3c 82 SUPERFAMILY SSF54565 1 76 2.62E-27 T 23-04-2016 IPR023803 Ribosomal protein S16 domain VV93_RS12605 2dacc31f60680994300ac18093cebc3c 82 Pfam PF00886 Ribosomal protein S16 8 68 5.6E-23 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS12605 2dacc31f60680994300ac18093cebc3c 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 23-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS12605 2dacc31f60680994300ac18093cebc3c 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.814 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS03930 237f1745392c3c550d31265aa7a03af7 145 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 13 36 1.9E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS03930 237f1745392c3c550d31265aa7a03af7 145 Gene3D G3DSA:3.30.700.10 19 115 5.2E-14 T 23-04-2016 VV93_RS03930 237f1745392c3c550d31265aa7a03af7 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 36 5.2E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS03930 237f1745392c3c550d31265aa7a03af7 145 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 39 123 3.2E-17 T 23-04-2016 IPR031982 Type IV minor pilin ComP VV93_RS03930 237f1745392c3c550d31265aa7a03af7 145 PANTHER PTHR30093:SF4 17 68 1.4E-13 T 23-04-2016 VV93_RS03930 237f1745392c3c550d31265aa7a03af7 145 SUPERFAMILY SSF54523 18 120 1.88E-17 T 23-04-2016 VV93_RS03930 237f1745392c3c550d31265aa7a03af7 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS03930 237f1745392c3c550d31265aa7a03af7 145 PANTHER PTHR30093 17 68 1.4E-13 T 23-04-2016 VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 Pfam PF00809 Pterin binding enzyme 361 599 1.4E-58 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 SUPERFAMILY SSF52242 745 895 2.75E-45 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 23-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 Pfam PF02310 B12 binding domain 749 841 1.2E-17 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 Gene3D G3DSA:3.10.196.10 959 1225 1.7E-112 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 Gene3D G3DSA:3.20.20.330 6 364 1.6E-126 T 23-04-2016 IPR003726 Homocysteine-binding domain VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 SUPERFAMILY SSF56507 903 1225 3.14E-134 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 SUPERFAMILY SSF82282 8 400 1.16E-118 T 23-04-2016 IPR003726 Homocysteine-binding domain VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 SUPERFAMILY SSF51717 357 631 2.49E-87 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 PIRSF PIRSF000381 3 1197 0.0 T 23-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 Gene3D G3DSA:3.20.20.20 365 637 5.7E-114 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 PANTHER PTHR21091:SF111 4 403 3.3E-169 T 23-04-2016 VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 Gene3D G3DSA:3.40.50.280 745 895 2.6E-65 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 1.8E-124 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 Gene3D G3DSA:1.10.1240.10 653 737 3.2E-39 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 SUPERFAMILY SSF47644 654 740 4.97E-29 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 Pfam PF02607 B12 binding domain 660 734 1.0E-25 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 PANTHER PTHR21091 4 403 3.3E-169 T 23-04-2016 VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 326 6.8E-93 T 23-04-2016 IPR003726 Homocysteine-binding domain VV93_RS13615 76d8f9a984dd4362385cc50d66dd0720 1226 SMART SM01018 658 741 3.6E-45 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VV93_RS10180 70cc7d28f2b5a96f91963b01fb0775ad 445 Gene3D G3DSA:1.10.10.10 29 123 1.2E-45 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS10180 70cc7d28f2b5a96f91963b01fb0775ad 445 Pfam PF03882 MukF winged-helix domain 10 122 1.4E-54 T 23-04-2016 IPR033439 Chromosome partition protein MukF, winged-helix domain VV93_RS10180 70cc7d28f2b5a96f91963b01fb0775ad 445 Pfam PF17193 MukF C-terminal domain 288 445 1.5E-77 T 23-04-2016 IPR033441 Chromosome partition protein MukF, C-terminal domain VV93_RS10180 70cc7d28f2b5a96f91963b01fb0775ad 445 SUPERFAMILY SSF140570 124 286 7.85E-76 T 23-04-2016 IPR033440 Chromosome partition protein MukF, middle domain VV93_RS10180 70cc7d28f2b5a96f91963b01fb0775ad 445 PIRSF PIRSF018282 1 445 2.1E-254 T 23-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VV93_RS10180 70cc7d28f2b5a96f91963b01fb0775ad 445 Pfam PF17192 MukF middle domain 126 286 6.5E-78 T 23-04-2016 IPR033440 Chromosome partition protein MukF, middle domain VV93_RS10180 70cc7d28f2b5a96f91963b01fb0775ad 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 56.36 T 23-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VV93_RS10180 70cc7d28f2b5a96f91963b01fb0775ad 445 SUPERFAMILY SSF46785 13 123 1.22E-45 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS12350 dd78b6da8a08fb932a61dbd1e633386c 328 SUPERFAMILY SSF161098 93 324 2.88E-14 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS12350 dd78b6da8a08fb932a61dbd1e633386c 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 325 8.7E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS12350 dd78b6da8a08fb932a61dbd1e633386c 328 Gene3D G3DSA:1.10.3720.10 93 320 1.2E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS12350 dd78b6da8a08fb932a61dbd1e633386c 328 PANTHER PTHR30465:SF24 1 325 1.5E-116 T 23-04-2016 VV93_RS12350 dd78b6da8a08fb932a61dbd1e633386c 328 PANTHER PTHR30465 1 325 1.5E-116 T 23-04-2016 VV93_RS11800 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13551 Winged helix-turn helix 24 83 6.9E-14 T 23-04-2016 VV93_RS11800 1cb5e881bcce05bbdf751308bd4411fb 158 SUPERFAMILY SSF46689 16 132 1.52E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS11800 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13592 Winged helix-turn helix 99 156 2.1E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS11800 1cb5e881bcce05bbdf751308bd4411fb 158 Gene3D G3DSA:1.10.10.60 20 89 2.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS12035 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13551 Winged helix-turn helix 24 83 6.9E-14 T 23-04-2016 VV93_RS12035 1cb5e881bcce05bbdf751308bd4411fb 158 SUPERFAMILY SSF46689 16 132 1.52E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS12035 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13592 Winged helix-turn helix 99 156 2.1E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS12035 1cb5e881bcce05bbdf751308bd4411fb 158 Gene3D G3DSA:1.10.10.60 20 89 2.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS05945 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13551 Winged helix-turn helix 24 83 6.9E-14 T 23-04-2016 VV93_RS05945 1cb5e881bcce05bbdf751308bd4411fb 158 SUPERFAMILY SSF46689 16 132 1.52E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS05945 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13592 Winged helix-turn helix 99 156 2.1E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS05945 1cb5e881bcce05bbdf751308bd4411fb 158 Gene3D G3DSA:1.10.10.60 20 89 2.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS00155 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13551 Winged helix-turn helix 24 83 6.9E-14 T 23-04-2016 VV93_RS00155 1cb5e881bcce05bbdf751308bd4411fb 158 SUPERFAMILY SSF46689 16 132 1.52E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS00155 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13592 Winged helix-turn helix 99 156 2.1E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS00155 1cb5e881bcce05bbdf751308bd4411fb 158 Gene3D G3DSA:1.10.10.60 20 89 2.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS05535 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13551 Winged helix-turn helix 24 83 6.9E-14 T 23-04-2016 VV93_RS05535 1cb5e881bcce05bbdf751308bd4411fb 158 SUPERFAMILY SSF46689 16 132 1.52E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS05535 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13592 Winged helix-turn helix 99 156 2.1E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS05535 1cb5e881bcce05bbdf751308bd4411fb 158 Gene3D G3DSA:1.10.10.60 20 89 2.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS02110 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13551 Winged helix-turn helix 24 83 6.9E-14 T 23-04-2016 VV93_RS02110 1cb5e881bcce05bbdf751308bd4411fb 158 SUPERFAMILY SSF46689 16 132 1.52E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS02110 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13592 Winged helix-turn helix 99 156 2.1E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS02110 1cb5e881bcce05bbdf751308bd4411fb 158 Gene3D G3DSA:1.10.10.60 20 89 2.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS08810 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13551 Winged helix-turn helix 24 83 6.9E-14 T 23-04-2016 VV93_RS08810 1cb5e881bcce05bbdf751308bd4411fb 158 SUPERFAMILY SSF46689 16 132 1.52E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS08810 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13592 Winged helix-turn helix 99 156 2.1E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS08810 1cb5e881bcce05bbdf751308bd4411fb 158 Gene3D G3DSA:1.10.10.60 20 89 2.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS06740 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13551 Winged helix-turn helix 24 83 6.9E-14 T 23-04-2016 VV93_RS06740 1cb5e881bcce05bbdf751308bd4411fb 158 SUPERFAMILY SSF46689 16 132 1.52E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS06740 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13592 Winged helix-turn helix 99 156 2.1E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS06740 1cb5e881bcce05bbdf751308bd4411fb 158 Gene3D G3DSA:1.10.10.60 20 89 2.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS09165 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13551 Winged helix-turn helix 24 83 6.9E-14 T 23-04-2016 VV93_RS09165 1cb5e881bcce05bbdf751308bd4411fb 158 SUPERFAMILY SSF46689 16 132 1.52E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS09165 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13592 Winged helix-turn helix 99 156 2.1E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS09165 1cb5e881bcce05bbdf751308bd4411fb 158 Gene3D G3DSA:1.10.10.60 20 89 2.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS08585 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13551 Winged helix-turn helix 24 83 6.9E-14 T 23-04-2016 VV93_RS08585 1cb5e881bcce05bbdf751308bd4411fb 158 SUPERFAMILY SSF46689 16 132 1.52E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS08585 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13592 Winged helix-turn helix 99 156 2.1E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS08585 1cb5e881bcce05bbdf751308bd4411fb 158 Gene3D G3DSA:1.10.10.60 20 89 2.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS03890 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13551 Winged helix-turn helix 24 83 6.9E-14 T 23-04-2016 VV93_RS03890 1cb5e881bcce05bbdf751308bd4411fb 158 SUPERFAMILY SSF46689 16 132 1.52E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS03890 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13592 Winged helix-turn helix 99 156 2.1E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS03890 1cb5e881bcce05bbdf751308bd4411fb 158 Gene3D G3DSA:1.10.10.60 20 89 2.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS09445 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13551 Winged helix-turn helix 24 83 6.9E-14 T 23-04-2016 VV93_RS09445 1cb5e881bcce05bbdf751308bd4411fb 158 SUPERFAMILY SSF46689 16 132 1.52E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS09445 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13592 Winged helix-turn helix 99 156 2.1E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS09445 1cb5e881bcce05bbdf751308bd4411fb 158 Gene3D G3DSA:1.10.10.60 20 89 2.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS06840 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13551 Winged helix-turn helix 24 83 6.9E-14 T 23-04-2016 VV93_RS06840 1cb5e881bcce05bbdf751308bd4411fb 158 SUPERFAMILY SSF46689 16 132 1.52E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS06840 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13592 Winged helix-turn helix 99 156 2.1E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS06840 1cb5e881bcce05bbdf751308bd4411fb 158 Gene3D G3DSA:1.10.10.60 20 89 2.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS00880 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13551 Winged helix-turn helix 24 83 6.9E-14 T 23-04-2016 VV93_RS00880 1cb5e881bcce05bbdf751308bd4411fb 158 SUPERFAMILY SSF46689 16 132 1.52E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS00880 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13592 Winged helix-turn helix 99 156 2.1E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS00880 1cb5e881bcce05bbdf751308bd4411fb 158 Gene3D G3DSA:1.10.10.60 20 89 2.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS00145 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13551 Winged helix-turn helix 24 83 6.9E-14 T 23-04-2016 VV93_RS00145 1cb5e881bcce05bbdf751308bd4411fb 158 SUPERFAMILY SSF46689 16 132 1.52E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS00145 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13592 Winged helix-turn helix 99 156 2.1E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS00145 1cb5e881bcce05bbdf751308bd4411fb 158 Gene3D G3DSA:1.10.10.60 20 89 2.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS02410 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13551 Winged helix-turn helix 24 83 6.9E-14 T 23-04-2016 VV93_RS02410 1cb5e881bcce05bbdf751308bd4411fb 158 SUPERFAMILY SSF46689 16 132 1.52E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS02410 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13592 Winged helix-turn helix 99 156 2.1E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS02410 1cb5e881bcce05bbdf751308bd4411fb 158 Gene3D G3DSA:1.10.10.60 20 89 2.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS10150 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13551 Winged helix-turn helix 24 83 6.9E-14 T 23-04-2016 VV93_RS10150 1cb5e881bcce05bbdf751308bd4411fb 158 SUPERFAMILY SSF46689 16 132 1.52E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS10150 1cb5e881bcce05bbdf751308bd4411fb 158 Pfam PF13592 Winged helix-turn helix 99 156 2.1E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS10150 1cb5e881bcce05bbdf751308bd4411fb 158 Gene3D G3DSA:1.10.10.60 20 89 2.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS04060 dfad7f6aaad0e0ed8b9bea01969a8ea0 369 Gene3D G3DSA:3.90.870.10 2 211 1.5E-100 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VV93_RS04060 dfad7f6aaad0e0ed8b9bea01969a8ea0 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 2.7E-75 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS04060 dfad7f6aaad0e0ed8b9bea01969a8ea0 369 PIRSF PIRSF001259 3 369 1.1E-129 T 23-04-2016 VV93_RS04060 dfad7f6aaad0e0ed8b9bea01969a8ea0 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.678 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS04060 dfad7f6aaad0e0ed8b9bea01969a8ea0 369 SUPERFAMILY SSF55821 3 202 8.47E-87 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VV93_RS04060 dfad7f6aaad0e0ed8b9bea01969a8ea0 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.0E-84 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS04060 dfad7f6aaad0e0ed8b9bea01969a8ea0 369 PANTHER PTHR21327 7 367 1.7E-153 T 23-04-2016 VV93_RS04060 dfad7f6aaad0e0ed8b9bea01969a8ea0 369 PANTHER PTHR21327:SF6 7 367 1.7E-153 T 23-04-2016 VV93_RS04060 dfad7f6aaad0e0ed8b9bea01969a8ea0 369 Pfam PF00925 GTP cyclohydrolase II 207 367 5.1E-41 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VV93_RS04060 dfad7f6aaad0e0ed8b9bea01969a8ea0 369 SUPERFAMILY SSF142695 205 367 2.22E-48 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VV93_RS11675 eed8ff7e8e63e01a10ff4713b44271f4 222 Pfam PF13490 Putative zinc-finger 9 37 4.5E-6 T 23-04-2016 IPR027383 Putative zinc-finger VV93_RS11675 eed8ff7e8e63e01a10ff4713b44271f4 222 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 219 8.6E-88 T 23-04-2016 IPR012807 Anti-sigma factor ChrR, putative VV93_RS11675 eed8ff7e8e63e01a10ff4713b44271f4 222 Pfam PF12973 ChrR Cupin-like domain 130 196 4.2E-14 T 23-04-2016 IPR025979 ChrR-like cupin domain VV93_RS11675 eed8ff7e8e63e01a10ff4713b44271f4 222 SUPERFAMILY SSF51182 112 206 1.1E-14 T 23-04-2016 IPR011051 RmlC-like cupin domain VV93_RS11675 eed8ff7e8e63e01a10ff4713b44271f4 222 Gene3D G3DSA:2.60.120.10 136 206 5.0E-13 T 23-04-2016 IPR014710 RmlC-like jelly roll fold VV93_RS12825 0d1d61535f0920a3acdfd97cc82397a2 426 Gene3D G3DSA:2.40.160.10 31 132 8.2E-9 T 23-04-2016 IPR023614 Porin domain VV93_RS12825 0d1d61535f0920a3acdfd97cc82397a2 426 Gene3D G3DSA:2.40.160.10 168 333 8.2E-9 T 23-04-2016 IPR023614 Porin domain VV93_RS12825 0d1d61535f0920a3acdfd97cc82397a2 426 Gene3D G3DSA:2.40.160.10 366 400 8.2E-9 T 23-04-2016 IPR023614 Porin domain VV93_RS12825 0d1d61535f0920a3acdfd97cc82397a2 426 SUPERFAMILY SSF56935 271 426 6.23E-17 T 23-04-2016 VV93_RS12825 0d1d61535f0920a3acdfd97cc82397a2 426 SUPERFAMILY SSF56935 28 241 6.23E-17 T 23-04-2016 VV93_RS13575 49fef01d2a7ae495d028ec6fcb23a42a 667 SMART SM00052 399 641 3.3E-16 T 23-04-2016 IPR001633 EAL domain VV93_RS13575 49fef01d2a7ae495d028ec6fcb23a42a 667 SUPERFAMILY SSF55073 235 388 1.18E-17 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS13575 49fef01d2a7ae495d028ec6fcb23a42a 667 SMART SM00267 218 388 1.4E-7 T 23-04-2016 IPR000160 GGDEF domain VV93_RS13575 49fef01d2a7ae495d028ec6fcb23a42a 667 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 41 135 2.5E-27 T 23-04-2016 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 VV93_RS13575 49fef01d2a7ae495d028ec6fcb23a42a 667 Gene3D G3DSA:3.30.70.270 232 389 2.9E-20 T 23-04-2016 VV93_RS13575 49fef01d2a7ae495d028ec6fcb23a42a 667 Pfam PF00990 Diguanylate cyclase, GGDEF domain 231 383 1.8E-19 T 23-04-2016 IPR000160 GGDEF domain VV93_RS13575 49fef01d2a7ae495d028ec6fcb23a42a 667 PANTHER PTHR33121:SF16 362 638 5.8E-26 T 23-04-2016 VV93_RS13575 49fef01d2a7ae495d028ec6fcb23a42a 667 SUPERFAMILY SSF141868 430 638 1.7E-36 T 23-04-2016 IPR001633 EAL domain VV93_RS13575 49fef01d2a7ae495d028ec6fcb23a42a 667 PANTHER PTHR33121 362 638 5.8E-26 T 23-04-2016 VV93_RS13575 49fef01d2a7ae495d028ec6fcb23a42a 667 Gene3D G3DSA:3.20.20.450 409 638 2.0E-36 T 23-04-2016 IPR001633 EAL domain VV93_RS13575 49fef01d2a7ae495d028ec6fcb23a42a 667 Pfam PF00563 EAL domain 432 638 2.9E-45 T 23-04-2016 IPR001633 EAL domain VV93_RS11595 6aeff5572310cf6bb30395ab7d2a04df 639 SMART SM00487 14 210 1.6E-27 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV93_RS11595 6aeff5572310cf6bb30395ab7d2a04df 639 Gene3D G3DSA:1.10.10.10 513 631 3.9E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS11595 6aeff5572310cf6bb30395ab7d2a04df 639 SUPERFAMILY SSF52540 59 341 1.38E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11595 6aeff5572310cf6bb30395ab7d2a04df 639 Pfam PF16124 RecQ zinc-binding 511 558 7.5E-8 T 23-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VV93_RS11595 6aeff5572310cf6bb30395ab7d2a04df 639 PANTHER PTHR13710 1 344 3.7E-158 T 23-04-2016 VV93_RS11595 6aeff5572310cf6bb30395ab7d2a04df 639 PANTHER PTHR13710 506 620 3.7E-158 T 23-04-2016 VV93_RS11595 6aeff5572310cf6bb30395ab7d2a04df 639 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 133 142 - T 23-04-2016 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GO:0003676|GO:0005524|GO:0008026 VV93_RS11595 6aeff5572310cf6bb30395ab7d2a04df 639 Gene3D G3DSA:3.40.50.300 200 336 3.6E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11595 6aeff5572310cf6bb30395ab7d2a04df 639 SMART SM00490 244 325 4.8E-25 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS11595 6aeff5572310cf6bb30395ab7d2a04df 639 Gene3D G3DSA:3.40.50.300 4 192 1.3E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11595 6aeff5572310cf6bb30395ab7d2a04df 639 Pfam PF00271 Helicase conserved C-terminal domain 216 325 2.6E-18 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS11595 6aeff5572310cf6bb30395ab7d2a04df 639 Pfam PF00270 DEAD/DEAH box helicase 21 180 4.8E-17 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV93_RS11595 6aeff5572310cf6bb30395ab7d2a04df 639 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 349 4.0E-112 T 23-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VV93_RS11595 6aeff5572310cf6bb30395ab7d2a04df 639 PANTHER PTHR13710:SF81 1 344 3.7E-158 T 23-04-2016 VV93_RS11595 6aeff5572310cf6bb30395ab7d2a04df 639 PANTHER PTHR13710:SF81 506 620 3.7E-158 T 23-04-2016 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 Gene3D G3DSA:3.30.499.10 317 465 4.1E-62 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.772 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 Gene3D G3DSA:3.30.499.10 2 158 4.6E-23 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 PANTHER PTHR11670:SF38 1 307 1.7E-269 T 23-04-2016 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 PANTHER PTHR11670:SF38 327 466 1.7E-269 T 23-04-2016 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 Gene3D G3DSA:3.40.1060.10 166 280 9.5E-41 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 464 2.2E-265 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 PRINTS PR00415 Aconitase family signature 119 132 9.0E-50 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 PRINTS PR00415 Aconitase family signature 209 222 9.0E-50 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 PRINTS PR00415 Aconitase family signature 133 148 9.0E-50 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 PRINTS PR00415 Aconitase family signature 82 95 9.0E-50 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 PRINTS PR00415 Aconitase family signature 108 116 9.0E-50 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 PRINTS PR00415 Aconitase family signature 399 412 9.0E-50 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 PRINTS PR00415 Aconitase family signature 286 300 9.0E-50 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 PRINTS PR00415 Aconitase family signature 195 208 9.0E-50 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 PRINTS PR00415 Aconitase family signature 343 354 9.0E-50 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 7.7E-156 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 PANTHER PTHR11670 1 307 1.7E-269 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 PANTHER PTHR11670 327 466 1.7E-269 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02325 8004d5928b665af6c3128ecd1539604a 466 SUPERFAMILY SSF53732 1 465 1.05E-163 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS01175 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 SUPERFAMILY SSF109604 3 190 4.71E-74 T 23-04-2016 VV93_RS01175 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 SMART SM00471 41 153 2.6E-10 T 23-04-2016 IPR003607 HD/PDEase domain VV93_RS01175 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 SUPERFAMILY SSF81271 376 448 1.64E-20 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VV93_RS01175 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 PANTHER PTHR21262 3 706 0.0 T 23-04-2016 VV93_RS01175 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 SMART SM00954 235 345 2.7E-59 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 VV93_RS01175 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 SUPERFAMILY SSF81301 180 393 1.31E-59 T 23-04-2016 VV93_RS01175 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 Pfam PF02824 TGS domain 389 447 2.6E-19 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 VV93_RS01175 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 Pfam PF13291 ACT domain 627 703 3.8E-15 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VV93_RS01175 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 Gene3D G3DSA:3.30.70.260 631 697 2.1E-8 T 23-04-2016 VV93_RS01175 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 SUPERFAMILY SSF55021 633 703 2.83E-6 T 23-04-2016 VV93_RS01175 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 Gene3D G3DSA:3.10.20.30 388 448 1.3E-19 T 23-04-2016 IPR012675 Beta-grasp domain VV93_RS01175 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 PANTHER PTHR21262:SF0 3 706 0.0 T 23-04-2016 VV93_RS01175 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.0E-34 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 VV93_RS01175 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 Pfam PF13328 HD domain 28 175 4.1E-53 T 23-04-2016 IPR003607 HD/PDEase domain VV93_RS01175 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 701 5.3E-268 T 23-04-2016 IPR004811 RelA/SpoT family GO:0015969 VV93_RS01175 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 Gene3D G3DSA:3.30.460.10 178 324 2.3E-46 T 23-04-2016 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.30.930.10 243 531 1.0E-123 T 23-04-2016 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 PANTHER PTHR11451:SF31 1 636 0.0 T 23-04-2016 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 Pfam PF03129 Anticodon binding domain 542 631 4.4E-22 T 23-04-2016 IPR004154 Anticodon-binding VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.089 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 2.7E-50 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.10.20.30 1 64 7.2E-23 T 23-04-2016 IPR012675 Beta-grasp domain VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 SMART SM00863 171 220 1.6E-18 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 6.1E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 6.1E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 6.1E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 6.1E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 6.1E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.40.50.800 533 639 1.4E-35 T 23-04-2016 IPR004154 Anticodon-binding VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 SUPERFAMILY SSF55681 244 527 1.38E-100 T 23-04-2016 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.30.980.10 189 224 2.6E-40 T 23-04-2016 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.30.980.10 67 130 2.6E-40 T 23-04-2016 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.30.54.20 132 188 8.5E-21 T 23-04-2016 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 1.7E-13 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 Pfam PF02824 TGS domain 4 61 1.7E-12 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 SUPERFAMILY SSF52954 530 637 1.96E-32 T 23-04-2016 IPR004154 Anticodon-binding VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 PANTHER PTHR11451 1 636 0.0 T 23-04-2016 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 6.2E-242 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 SUPERFAMILY SSF55186 65 242 6.93E-63 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 VV93_RS08685 fcf6b36e66f497db663cc92ed5bfb2a5 642 SUPERFAMILY SSF81271 3 61 4.9E-16 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VV93_RS02305 4325f0d0ab3f1b0d6896cf67614b17bf 776 Pfam PF03968 OstA-like protein 56 187 5.3E-21 T 23-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal VV93_RS02305 4325f0d0ab3f1b0d6896cf67614b17bf 776 Pfam PF04453 Organic solvent tolerance protein 295 677 3.4E-111 T 23-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 VV93_RS02305 4325f0d0ab3f1b0d6896cf67614b17bf 776 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 9 748 20.402 T 23-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 VV93_RS02305 4325f0d0ab3f1b0d6896cf67614b17bf 776 Gene3D G3DSA:2.60.450.10 46 203 1.2E-21 T 23-04-2016 VV93_RS02305 4325f0d0ab3f1b0d6896cf67614b17bf 776 PANTHER PTHR30189 51 776 4.6E-96 T 23-04-2016 VV93_RS02815 b88b04de4806ad34a4ec5d05ca131077 442 Gene3D G3DSA:3.90.190.20 306 437 2.6E-41 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VV93_RS02815 b88b04de4806ad34a4ec5d05ca131077 442 PANTHER PTHR23135:SF2 1 442 7.0E-146 T 23-04-2016 VV93_RS02815 b88b04de4806ad34a4ec5d05ca131077 442 SUPERFAMILY SSF53244 304 441 3.3E-43 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VV93_RS02815 b88b04de4806ad34a4ec5d05ca131077 442 Gene3D G3DSA:3.40.1190.10 97 304 4.8E-59 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02815 b88b04de4806ad34a4ec5d05ca131077 442 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 439 5.6E-131 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS02815 b88b04de4806ad34a4ec5d05ca131077 442 PANTHER PTHR23135 1 442 7.0E-146 T 23-04-2016 VV93_RS02815 b88b04de4806ad34a4ec5d05ca131077 442 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 441 32.397 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS02815 b88b04de4806ad34a4ec5d05ca131077 442 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 378 2.5E-7 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VV93_RS02815 b88b04de4806ad34a4ec5d05ca131077 442 SUPERFAMILY SSF53623 98 302 1.83E-53 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02815 b88b04de4806ad34a4ec5d05ca131077 442 Gene3D G3DSA:3.40.50.720 8 95 1.1E-18 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS02815 b88b04de4806ad34a4ec5d05ca131077 442 SUPERFAMILY SSF51984 8 97 2.62E-16 T 23-04-2016 VV93_RS02815 b88b04de4806ad34a4ec5d05ca131077 442 Pfam PF08245 Mur ligase middle domain 113 284 1.3E-28 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS14805 e918b281aec85a3f6376c4d5e308fd02 90 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VV93_RS14805 e918b281aec85a3f6376c4d5e308fd02 90 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 78 2.4E-13 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VV93_RS14805 e918b281aec85a3f6376c4d5e308fd02 90 Gene3D G3DSA:3.10.20.30 2 86 7.1E-22 T 23-04-2016 IPR012675 Beta-grasp domain VV93_RS14805 e918b281aec85a3f6376c4d5e308fd02 90 SUPERFAMILY SSF54292 1 87 4.19E-24 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VV93_RS00660 913fd9ff8b0b481ede7013c63ba9e1f0 180 SUPERFAMILY SSF55729 5 136 3.78E-17 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS00660 913fd9ff8b0b481ede7013c63ba9e1f0 180 Gene3D G3DSA:3.40.630.30 1 136 7.6E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS00660 913fd9ff8b0b481ede7013c63ba9e1f0 180 Pfam PF13508 Acetyltransferase (GNAT) domain 52 132 1.3E-8 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS18945 44a73e159aae112b5bad9fa684e583bf 197 PANTHER PTHR10099 2 197 8.8E-158 T 23-04-2016 VV93_RS18945 44a73e159aae112b5bad9fa684e583bf 197 PANTHER PTHR10099:SF5 2 197 8.8E-158 T 23-04-2016 VV93_RS18945 44a73e159aae112b5bad9fa684e583bf 197 Gene3D G3DSA:3.30.1330.10 16 197 1.6E-34 T 23-04-2016 IPR016188 PurM-like, N-terminal domain VV93_RS18945 44a73e159aae112b5bad9fa684e583bf 197 SUPERFAMILY SSF109736 2 25 1.18E-10 T 23-04-2016 VV93_RS18945 44a73e159aae112b5bad9fa684e583bf 197 SUPERFAMILY SSF55326 26 197 9.42E-56 T 23-04-2016 VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 163 1.9E-19 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 1.1E-303 T 23-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 Gene3D G3DSA:2.40.30.10 293 394 7.8E-24 T 23-04-2016 VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 1.8E-46 T 23-04-2016 VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.029 T 23-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 SUPERFAMILY SSF50447 262 393 3.77E-27 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 Gene3D G3DSA:3.30.70.870 395 464 2.0E-13 T 23-04-2016 VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 8.3E-8 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 SUPERFAMILY SSF54980 393 468 3.6E-17 T 23-04-2016 IPR009022 Elongation factor G, III-V domain VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 Gene3D G3DSA:3.40.50.300 9 283 1.3E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 PANTHER PTHR23115 1 184 4.0E-251 T 23-04-2016 VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 PANTHER PTHR23115 251 472 4.0E-251 T 23-04-2016 VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 1.8E-46 T 23-04-2016 IPR032090 Peptide chain release factor 3, C-terminal VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 SUPERFAMILY SSF52540 10 277 1.5E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 PANTHER PTHR23115:SF69 1 184 4.0E-251 T 23-04-2016 VV93_RS12115 d27cec415e5ad1cdcc07aa03dadda16d 529 PANTHER PTHR23115:SF69 251 472 4.0E-251 T 23-04-2016 VV93_RS14305 0f73d4119ff3eb34043f789e00b3290e 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 49.889 T 23-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VV93_RS14305 0f73d4119ff3eb34043f789e00b3290e 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 283 3.0E-87 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VV93_RS14305 0f73d4119ff3eb34043f789e00b3290e 285 PANTHER PTHR10067 4 280 4.5E-120 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VV93_RS14305 0f73d4119ff3eb34043f789e00b3290e 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 280 2.7E-61 T 23-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VV93_RS13720 891771c5b5551c147d3e0cd9903e7ff7 326 PANTHER PTHR11082:SF29 6 324 2.6E-163 T 23-04-2016 VV93_RS13720 891771c5b5551c147d3e0cd9903e7ff7 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 87 105 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV93_RS13720 891771c5b5551c147d3e0cd9903e7ff7 326 Gene3D G3DSA:3.20.20.70 5 250 1.8E-77 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS13720 891771c5b5551c147d3e0cd9903e7ff7 326 Pfam PF01207 Dihydrouridine synthase (Dus) 9 316 5.5E-95 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV93_RS13720 891771c5b5551c147d3e0cd9903e7ff7 326 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 320 1.1E-162 T 23-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VV93_RS13720 891771c5b5551c147d3e0cd9903e7ff7 326 PANTHER PTHR11082 6 324 2.6E-163 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV93_RS13720 891771c5b5551c147d3e0cd9903e7ff7 326 SUPERFAMILY SSF51395 6 319 8.06E-75 T 23-04-2016 VV93_RS13720 891771c5b5551c147d3e0cd9903e7ff7 326 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 322 53.63 T 23-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VV93_RS13720 891771c5b5551c147d3e0cd9903e7ff7 326 PIRSF PIRSF006621 1 323 2.0E-76 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV93_RS05465 529ff1095a6fab80bac3b9f057e305a1 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 487 677 3.5E-48 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS05465 529ff1095a6fab80bac3b9f057e305a1 678 PANTHER PTHR32089 2 677 2.4E-115 T 23-04-2016 VV93_RS05465 529ff1095a6fab80bac3b9f057e305a1 678 SUPERFAMILY SSF58104 378 677 1.44E-64 T 23-04-2016 VV93_RS05465 529ff1095a6fab80bac3b9f057e305a1 678 Gene3D G3DSA:3.30.450.20 173 323 2.6E-16 T 23-04-2016 VV93_RS05465 529ff1095a6fab80bac3b9f057e305a1 678 SMART SM00283 417 678 1.5E-67 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS05465 529ff1095a6fab80bac3b9f057e305a1 678 Gene3D G3DSA:1.10.287.950 432 647 1.9E-52 T 23-04-2016 VV93_RS05465 529ff1095a6fab80bac3b9f057e305a1 678 SUPERFAMILY SSF103190 115 211 1.26E-12 T 23-04-2016 IPR029151 Periplasmic sensor domain-like VV93_RS05465 529ff1095a6fab80bac3b9f057e305a1 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 515 542 1.7E-21 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VV93_RS05465 529ff1095a6fab80bac3b9f057e305a1 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 544 573 1.7E-21 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VV93_RS05465 529ff1095a6fab80bac3b9f057e305a1 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 438 467 1.7E-21 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VV93_RS05465 529ff1095a6fab80bac3b9f057e305a1 678 Pfam PF17201 Cache 3/Cache 2 fusion domain 39 323 1.2E-65 T 23-04-2016 IPR033462 Cache 3/Cache 2 fusion domain VV93_RS09590 213520d6c02a15a916b3d9f6b4f5dc22 318 PIRSF PIRSF006621 1 318 1.4E-75 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV93_RS09590 213520d6c02a15a916b3d9f6b4f5dc22 318 Pfam PF01207 Dihydrouridine synthase (Dus) 5 300 2.4E-76 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV93_RS09590 213520d6c02a15a916b3d9f6b4f5dc22 318 PANTHER PTHR11082 1 316 1.2E-196 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV93_RS09590 213520d6c02a15a916b3d9f6b4f5dc22 318 PANTHER PTHR11082:SF26 1 316 1.2E-196 T 23-04-2016 VV93_RS09590 213520d6c02a15a916b3d9f6b4f5dc22 318 SUPERFAMILY SSF51395 1 312 1.12E-71 T 23-04-2016 VV93_RS09590 213520d6c02a15a916b3d9f6b4f5dc22 318 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.497 T 23-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 VV93_RS09590 213520d6c02a15a916b3d9f6b4f5dc22 318 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV93_RS09590 213520d6c02a15a916b3d9f6b4f5dc22 318 Gene3D G3DSA:3.20.20.70 2 241 1.3E-60 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS04115 9e327cdb9c562b2cba980c003c810799 307 SUPERFAMILY SSF46785 3 85 4.54E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS04115 9e327cdb9c562b2cba980c003c810799 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.5E-20 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS04115 9e327cdb9c562b2cba980c003c810799 307 PANTHER PTHR30537 1 306 7.2E-150 T 23-04-2016 VV93_RS04115 9e327cdb9c562b2cba980c003c810799 307 Gene3D G3DSA:3.40.190.10 180 259 4.4E-16 T 23-04-2016 VV93_RS04115 9e327cdb9c562b2cba980c003c810799 307 Gene3D G3DSA:3.40.190.10 94 179 1.7E-35 T 23-04-2016 VV93_RS04115 9e327cdb9c562b2cba980c003c810799 307 PANTHER PTHR30537:SF26 1 306 7.2E-150 T 23-04-2016 VV93_RS04115 9e327cdb9c562b2cba980c003c810799 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS04115 9e327cdb9c562b2cba980c003c810799 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS04115 9e327cdb9c562b2cba980c003c810799 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS04115 9e327cdb9c562b2cba980c003c810799 307 Gene3D G3DSA:1.10.10.10 1 86 3.0E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS04115 9e327cdb9c562b2cba980c003c810799 307 Pfam PF03466 LysR substrate binding domain 91 289 7.0E-37 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS04115 9e327cdb9c562b2cba980c003c810799 307 SUPERFAMILY SSF53850 92 294 6.7E-38 T 23-04-2016 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 867 30.26 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 SUPERFAMILY SSF56719 30 520 1.11E-187 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 SUPERFAMILY SSF101904 532 875 1.1E-105 T 23-04-2016 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 PANTHER PTHR10169:SF48 734 836 0.0 T 23-04-2016 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 PANTHER PTHR10169:SF48 449 708 0.0 T 23-04-2016 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 PANTHER PTHR10169:SF48 2 417 0.0 T 23-04-2016 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 709 0.0 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 Gene3D G3DSA:1.10.268.10 362 496 1.5E-48 T 23-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 Gene3D G3DSA:3.90.199.10 34 216 8.7E-86 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 PANTHER PTHR10169 734 836 0.0 T 23-04-2016 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 PANTHER PTHR10169 449 708 0.0 T 23-04-2016 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 PANTHER PTHR10169 2 417 0.0 T 23-04-2016 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 Gene3D G3DSA:2.120.10.90 530 863 3.1E-138 T 23-04-2016 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 5.2E-158 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 Gene3D G3DSA:3.30.1360.40 236 332 6.1E-40 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 SMART SM00434 11 498 5.0E-302 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 817 863 1.7E-12 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 3.1E-8 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 4.1E-7 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 7.4E-10 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 735 761 1.7E-6 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 767 813 7.5E-14 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV93_RS06005 8ada582b0c0d2383d001cadc33788d96 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 709 0.63 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV93_RS13895 ceb2d3efa36459a750f6f6b208aa71aa 388 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VV93_RS13895 ceb2d3efa36459a750f6f6b208aa71aa 388 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 382 3.9E-136 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VV93_RS13895 ceb2d3efa36459a750f6f6b208aa71aa 388 PANTHER PTHR11808 3 386 1.2E-175 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VV93_RS13895 ceb2d3efa36459a750f6f6b208aa71aa 388 Gene3D G3DSA:3.40.640.10 5 247 1.9E-84 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS13895 ceb2d3efa36459a750f6f6b208aa71aa 388 PIRSF PIRSF001434 1 385 2.2E-130 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VV93_RS13895 ceb2d3efa36459a750f6f6b208aa71aa 388 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 8.1E-199 T 23-04-2016 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|UniPathway: UPA00051 VV93_RS13895 ceb2d3efa36459a750f6f6b208aa71aa 388 Gene3D G3DSA:3.90.1150.10 250 385 7.6E-50 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS13895 ceb2d3efa36459a750f6f6b208aa71aa 388 SUPERFAMILY SSF53383 9 383 6.19E-115 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS07660 592787f0b192eaded9796f76578d1471 392 SUPERFAMILY SSF53756 4 369 4.24E-34 T 23-04-2016 VV93_RS07660 592787f0b192eaded9796f76578d1471 392 Pfam PF00534 Glycosyl transferases group 1 206 353 5.2E-17 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 VV93_RS07660 592787f0b192eaded9796f76578d1471 392 Gene3D G3DSA:3.40.50.2000 210 353 2.6E-10 T 23-04-2016 VV93_RS07660 592787f0b192eaded9796f76578d1471 392 PANTHER PTHR12526 273 357 1.2E-14 T 23-04-2016 VV93_RS04725 a716dc47b8081d6d7a110f11f980134f 135 Pfam PF00571 CBS domain 78 125 3.9E-10 T 23-04-2016 IPR000644 CBS domain VV93_RS04725 a716dc47b8081d6d7a110f11f980134f 135 SMART SM00116 83 130 3.5E-7 T 23-04-2016 IPR000644 CBS domain VV93_RS04725 a716dc47b8081d6d7a110f11f980134f 135 SMART SM00116 16 65 6.5 T 23-04-2016 IPR000644 CBS domain VV93_RS04725 a716dc47b8081d6d7a110f11f980134f 135 Gene3D G3DSA:3.10.580.10 8 126 3.2E-24 T 23-04-2016 VV93_RS04725 a716dc47b8081d6d7a110f11f980134f 135 PANTHER PTHR11911 5 126 1.2E-13 T 23-04-2016 VV93_RS04725 a716dc47b8081d6d7a110f11f980134f 135 SUPERFAMILY SSF54631 7 126 2.27E-24 T 23-04-2016 VV93_RS10080 5a778d4d4c162ae5b1df5e65ed6b9204 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 1.8E-105 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VV93_RS10080 5a778d4d4c162ae5b1df5e65ed6b9204 378 PANTHER PTHR30365:SF6 1 378 1.7E-186 T 23-04-2016 VV93_RS10080 5a778d4d4c162ae5b1df5e65ed6b9204 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 8.5E-168 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VV93_RS10080 5a778d4d4c162ae5b1df5e65ed6b9204 378 PANTHER PTHR30365 1 378 1.7E-186 T 23-04-2016 VV93_RS10080 5a778d4d4c162ae5b1df5e65ed6b9204 378 PIRSF PIRSF000267 2 376 1.9E-121 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VV93_RS05695 91379f31d8e9bf2a4e82e0918134e86e 355 PANTHER PTHR30578:SF0 1 355 4.0E-144 T 23-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 VV93_RS05695 91379f31d8e9bf2a4e82e0918134e86e 355 Pfam PF03116 NQR2, RnfD, RnfE family 6 354 2.9E-105 T 23-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 VV93_RS05695 91379f31d8e9bf2a4e82e0918134e86e 355 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 355 27.43 T 23-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 VV93_RS05695 91379f31d8e9bf2a4e82e0918134e86e 355 PANTHER PTHR30578 1 355 4.0E-144 T 23-04-2016 VV93_RS05695 91379f31d8e9bf2a4e82e0918134e86e 355 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 355 3.6E-138 T 23-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 VV93_RS00770 b0a173b9b01f4d6598d947a27a5c2983 261 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 74 258 2.3E-42 T 23-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 VV93_RS00770 b0a173b9b01f4d6598d947a27a5c2983 261 Gene3D G3DSA:3.40.50.880 67 259 3.1E-50 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS00770 b0a173b9b01f4d6598d947a27a5c2983 261 SUPERFAMILY SSF52317 72 258 3.44E-46 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS00770 b0a173b9b01f4d6598d947a27a5c2983 261 Pfam PF01965 DJ-1/PfpI family 73 256 1.3E-43 T 23-04-2016 IPR002818 DJ-1/PfpI VV93_RS00770 b0a173b9b01f4d6598d947a27a5c2983 261 PANTHER PTHR11019 144 247 2.1E-47 T 23-04-2016 VV93_RS00770 b0a173b9b01f4d6598d947a27a5c2983 261 PANTHER PTHR11019 6 123 2.1E-47 T 23-04-2016 VV93_RS00770 b0a173b9b01f4d6598d947a27a5c2983 261 PANTHER PTHR11019:SF115 144 247 2.1E-47 T 23-04-2016 VV93_RS00770 b0a173b9b01f4d6598d947a27a5c2983 261 PANTHER PTHR11019:SF115 6 123 2.1E-47 T 23-04-2016 VV93_RS00595 4926c10b5bc94e0cecb6984034d94de5 183 SUPERFAMILY SSF64288 11 178 1.18E-45 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VV93_RS00595 4926c10b5bc94e0cecb6984034d94de5 183 Pfam PF04345 Chorismate lyase 16 182 6.5E-54 T 23-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 VV93_RS00595 4926c10b5bc94e0cecb6984034d94de5 183 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 19 178 25.051 T 23-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 VV93_RS00595 4926c10b5bc94e0cecb6984034d94de5 183 Gene3D G3DSA:3.40.1410.10 17 178 7.5E-49 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VV93_RS00595 4926c10b5bc94e0cecb6984034d94de5 183 PANTHER PTHR38683 7 183 1.8E-48 T 23-04-2016 VV93_RS04760 32c81eb975716cbad88d853d04efb903 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 9.6E-75 T 23-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VV93_RS04760 32c81eb975716cbad88d853d04efb903 214 Pfam PF00406 Adenylate kinase 5 185 2.3E-59 T 23-04-2016 VV93_RS04760 32c81eb975716cbad88d853d04efb903 214 SUPERFAMILY SSF52540 1 202 1.6E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04760 32c81eb975716cbad88d853d04efb903 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.669 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VV93_RS04760 32c81eb975716cbad88d853d04efb903 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VV93_RS04760 32c81eb975716cbad88d853d04efb903 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 8.2E-15 T 23-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VV93_RS04760 32c81eb975716cbad88d853d04efb903 214 Gene3D G3DSA:3.40.50.300 1 213 3.0E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04760 32c81eb975716cbad88d853d04efb903 214 PANTHER PTHR23359 1 213 9.9E-112 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VV93_RS04760 32c81eb975716cbad88d853d04efb903 214 PRINTS PR00094 Adenylate kinase signature 4 17 1.7E-35 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VV93_RS04760 32c81eb975716cbad88d853d04efb903 214 PRINTS PR00094 Adenylate kinase signature 173 187 1.7E-35 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VV93_RS04760 32c81eb975716cbad88d853d04efb903 214 PRINTS PR00094 Adenylate kinase signature 81 97 1.7E-35 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VV93_RS04760 32c81eb975716cbad88d853d04efb903 214 PRINTS PR00094 Adenylate kinase signature 156 171 1.7E-35 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VV93_RS04760 32c81eb975716cbad88d853d04efb903 214 PRINTS PR00094 Adenylate kinase signature 32 46 1.7E-35 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 Gene3D G3DSA:2.40.50.140 42 153 5.5E-43 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 SUPERFAMILY SSF56037 195 394 2.38E-77 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 Gene3D G3DSA:3.30.70.380 703 794 6.2E-31 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 SMART SM00896 701 794 4.0E-45 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 SUPERFAMILY SSF46955 403 475 1.37E-19 T 23-04-2016 IPR009061 Putative DNA-binding domain VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 46.424 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 SUPERFAMILY SSF55681 467 689 2.44E-54 T 23-04-2016 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 PANTHER PTHR10947:SF0 2 794 0.0 T 23-04-2016 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 PANTHER PTHR10947 2 794 0.0 T 23-04-2016 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 Pfam PF03483 B3/4 domain 212 385 3.8E-71 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 Gene3D G3DSA:3.30.930.10 492 689 9.5E-67 T 23-04-2016 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 7.2E-278 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 SMART SM00873 212 385 1.6E-100 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 Pfam PF01588 Putative tRNA binding domain 45 145 1.0E-25 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 6.0E-18 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 Gene3D G3DSA:3.30.56.10 1 38 1.8E-25 T 23-04-2016 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 Gene3D G3DSA:3.30.56.10 155 184 1.8E-25 T 23-04-2016 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 SMART SM00874 403 471 2.0E-28 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 9.7E-29 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 SUPERFAMILY SSF54991 697 794 5.62E-30 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 SUPERFAMILY SSF50249 38 197 3.92E-46 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 Gene3D G3DSA:3.30.56.20 402 475 7.7E-26 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 VV93_RS08820 271df5fcfc3e041ab9b71ce2ed0b80a3 795 Gene3D G3DSA:3.50.40.10 198 392 9.3E-86 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VV93_RS11450 8f71aca3282d3bd6256323d6acd5bc8c 402 SUPERFAMILY SSF51735 2 150 3.27E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS11450 8f71aca3282d3bd6256323d6acd5bc8c 402 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 5.7E-37 T 23-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS11450 8f71aca3282d3bd6256323d6acd5bc8c 402 SUPERFAMILY SSF55347 126 274 1.24E-62 T 23-04-2016 VV93_RS11450 8f71aca3282d3bd6256323d6acd5bc8c 402 PANTHER PTHR30525 1 401 2.1E-220 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS11450 8f71aca3282d3bd6256323d6acd5bc8c 402 PIRSF PIRSF006205 1 402 2.7E-152 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS11450 8f71aca3282d3bd6256323d6acd5bc8c 402 SUPERFAMILY SSF69055 302 399 7.19E-30 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS11450 8f71aca3282d3bd6256323d6acd5bc8c 402 Gene3D G3DSA:1.10.1740.10 312 399 6.6E-28 T 23-04-2016 VV93_RS11450 8f71aca3282d3bd6256323d6acd5bc8c 402 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 1.8E-46 T 23-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS11450 8f71aca3282d3bd6256323d6acd5bc8c 402 Gene3D G3DSA:3.40.50.720 1 150 8.6E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS11450 8f71aca3282d3bd6256323d6acd5bc8c 402 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.747 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS11450 8f71aca3282d3bd6256323d6acd5bc8c 402 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 397 6.3E-163 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS11450 8f71aca3282d3bd6256323d6acd5bc8c 402 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 1.8E-39 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS14130 b7b1e6c423c072cf5db24adca4cb8ffd 192 PANTHER PTHR11922 1 190 6.6E-92 T 23-04-2016 VV93_RS14130 b7b1e6c423c072cf5db24adca4cb8ffd 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 9.8E-7 T 23-04-2016 VV93_RS14130 b7b1e6c423c072cf5db24adca4cb8ffd 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 9.8E-7 T 23-04-2016 VV93_RS14130 b7b1e6c423c072cf5db24adca4cb8ffd 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 91 108 9.8E-7 T 23-04-2016 VV93_RS14130 b7b1e6c423c072cf5db24adca4cb8ffd 192 Pfam PF00117 Glutamine amidotransferase class-I 4 190 6.6E-54 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VV93_RS14130 b7b1e6c423c072cf5db24adca4cb8ffd 192 Gene3D G3DSA:3.40.50.880 2 191 7.2E-66 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS14130 b7b1e6c423c072cf5db24adca4cb8ffd 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.2E-13 T 23-04-2016 VV93_RS14130 b7b1e6c423c072cf5db24adca4cb8ffd 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.2E-13 T 23-04-2016 VV93_RS14130 b7b1e6c423c072cf5db24adca4cb8ffd 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.2E-13 T 23-04-2016 VV93_RS14130 b7b1e6c423c072cf5db24adca4cb8ffd 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 8.8E-85 T 23-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VV93_RS14130 b7b1e6c423c072cf5db24adca4cb8ffd 192 PANTHER PTHR11922:SF7 1 190 6.6E-92 T 23-04-2016 VV93_RS14130 b7b1e6c423c072cf5db24adca4cb8ffd 192 SUPERFAMILY SSF52317 1 191 1.75E-53 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS14130 b7b1e6c423c072cf5db24adca4cb8ffd 192 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.4E-36 T 23-04-2016 VV93_RS14130 b7b1e6c423c072cf5db24adca4cb8ffd 192 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.4E-36 T 23-04-2016 VV93_RS14130 b7b1e6c423c072cf5db24adca4cb8ffd 192 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.4E-36 T 23-04-2016 VV93_RS14130 b7b1e6c423c072cf5db24adca4cb8ffd 192 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.4E-36 T 23-04-2016 VV93_RS14130 b7b1e6c423c072cf5db24adca4cb8ffd 192 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.4E-36 T 23-04-2016 VV93_RS14130 b7b1e6c423c072cf5db24adca4cb8ffd 192 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.4E-36 T 23-04-2016 VV93_RS13535 3972164dab5104d9f288daf2d9932dc6 406 PANTHER PTHR30012 2 405 1.8E-258 T 23-04-2016 VV93_RS13535 3972164dab5104d9f288daf2d9932dc6 406 PANTHER PTHR30012:SF4 2 405 1.8E-258 T 23-04-2016 VV93_RS13535 3972164dab5104d9f288daf2d9932dc6 406 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 4.9E-30 T 23-04-2016 IPR018076 Type II secretion system F domain VV93_RS13535 3972164dab5104d9f288daf2d9932dc6 406 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 8.9E-27 T 23-04-2016 IPR018076 Type II secretion system F domain VV93_RS13535 3972164dab5104d9f288daf2d9932dc6 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 1.5E-9 T 23-04-2016 IPR003004 GspF/PilC family VV93_RS13535 3972164dab5104d9f288daf2d9932dc6 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 1.5E-9 T 23-04-2016 IPR003004 GspF/PilC family VV93_RS13535 3972164dab5104d9f288daf2d9932dc6 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 1.5E-9 T 23-04-2016 IPR003004 GspF/PilC family VV93_RS13535 3972164dab5104d9f288daf2d9932dc6 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 1.5E-9 T 23-04-2016 IPR003004 GspF/PilC family VV93_RS08745 ad66b67a5dfde7b4a7973f184b73f11e 229 Gene3D G3DSA:3.40.1550.10 17 173 1.0E-13 T 23-04-2016 IPR028976 CheC-like domain VV93_RS08745 ad66b67a5dfde7b4a7973f184b73f11e 229 SUPERFAMILY SSF103039 10 173 2.09E-24 T 23-04-2016 IPR028976 CheC-like domain VV93_RS08745 ad66b67a5dfde7b4a7973f184b73f11e 229 Pfam PF11813 Protein of unknown function (DUF3334) 4 229 3.5E-116 T 23-04-2016 IPR024513 Protein of unknown function DUF3334 VV93_RS14400 0f651e82fdceb4457c02a0594962846f 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.852 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 VV93_RS14400 0f651e82fdceb4457c02a0594962846f 188 SUPERFAMILY SSF50104 2 64 3.51E-20 T 23-04-2016 IPR008991 Translation protein SH3-like domain VV93_RS14400 0f651e82fdceb4457c02a0594962846f 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 2.9E-76 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 VV93_RS14400 0f651e82fdceb4457c02a0594962846f 188 Gene3D G3DSA:2.40.50.140 66 129 2.0E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS14400 0f651e82fdceb4457c02a0594962846f 188 PIRSF PIRSF005901 2 188 6.5E-63 T 23-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 VV93_RS14400 0f651e82fdceb4457c02a0594962846f 188 PANTHER PTHR30053 1 188 1.0E-88 T 23-04-2016 VV93_RS14400 0f651e82fdceb4457c02a0594962846f 188 Gene3D G3DSA:2.40.50.140 130 187 4.4E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS14400 0f651e82fdceb4457c02a0594962846f 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 9.2E-25 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VV93_RS14400 0f651e82fdceb4457c02a0594962846f 188 Gene3D G3DSA:2.30.30.30 1 65 9.5E-29 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 VV93_RS14400 0f651e82fdceb4457c02a0594962846f 188 SMART SM00841 131 186 2.2E-31 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VV93_RS14400 0f651e82fdceb4457c02a0594962846f 188 SUPERFAMILY SSF50249 70 128 4.71E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS14400 0f651e82fdceb4457c02a0594962846f 188 SMART SM01185 69 123 3.5E-25 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VV93_RS14400 0f651e82fdceb4457c02a0594962846f 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 2.7E-22 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VV93_RS14400 0f651e82fdceb4457c02a0594962846f 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 23-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 VV93_RS14400 0f651e82fdceb4457c02a0594962846f 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 1.8E-23 T 23-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 VV93_RS14400 0f651e82fdceb4457c02a0594962846f 188 SUPERFAMILY SSF50249 130 187 4.45E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS15355 0e31c5de080d77cb82646334fefd7c24 462 PANTHER PTHR11649 16 462 5.4E-172 T 23-04-2016 VV93_RS15355 0e31c5de080d77cb82646334fefd7c24 462 PANTHER PTHR11649:SF56 16 462 5.4E-172 T 23-04-2016 VV93_RS15355 0e31c5de080d77cb82646334fefd7c24 462 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 224 379 1.6E-23 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VV93_RS15355 0e31c5de080d77cb82646334fefd7c24 462 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 13 462 33.086 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 VV93_RS15355 0e31c5de080d77cb82646334fefd7c24 462 Pfam PF12631 MnmE helical domain 131 459 6.5E-62 T 23-04-2016 IPR025867 MnmE, helical domain VV93_RS15355 0e31c5de080d77cb82646334fefd7c24 462 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 19 462 1.1E-101 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 VV93_RS15355 0e31c5de080d77cb82646334fefd7c24 462 SUPERFAMILY SSF116878 387 462 2.75E-53 T 23-04-2016 VV93_RS15355 0e31c5de080d77cb82646334fefd7c24 462 SUPERFAMILY SSF116878 129 228 2.75E-53 T 23-04-2016 VV93_RS15355 0e31c5de080d77cb82646334fefd7c24 462 Pfam PF10396 GTP-binding protein TrmE N-terminus 14 128 1.3E-35 T 23-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal VV93_RS15355 0e31c5de080d77cb82646334fefd7c24 462 Gene3D G3DSA:1.20.120.430 392 462 5.3E-60 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 VV93_RS15355 0e31c5de080d77cb82646334fefd7c24 462 Gene3D G3DSA:1.20.120.430 130 190 5.3E-60 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 VV93_RS15355 0e31c5de080d77cb82646334fefd7c24 462 Gene3D G3DSA:1.20.120.430 256 279 5.3E-60 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 VV93_RS15355 0e31c5de080d77cb82646334fefd7c24 462 Gene3D G3DSA:3.40.50.300 294 384 1.9E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15355 0e31c5de080d77cb82646334fefd7c24 462 SUPERFAMILY SSF52540 212 380 1.27E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15355 0e31c5de080d77cb82646334fefd7c24 462 SUPERFAMILY SSF52540 79 178 1.27E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15355 0e31c5de080d77cb82646334fefd7c24 462 Gene3D G3DSA:3.30.1360.120 8 129 3.0E-43 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VV93_RS15355 0e31c5de080d77cb82646334fefd7c24 462 Gene3D G3DSA:3.40.50.300 202 255 2.7E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15355 0e31c5de080d77cb82646334fefd7c24 462 Pfam PF01926 50S ribosome-binding GTPase 226 315 7.4E-24 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS08775 861425f9107ca4ac1c9526181d0ccc1a 391 Gene3D G3DSA:3.40.50.20 3 118 7.3E-40 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS08775 861425f9107ca4ac1c9526181d0ccc1a 391 SUPERFAMILY SSF56059 111 313 1.63E-56 T 23-04-2016 VV93_RS08775 861425f9107ca4ac1c9526181d0ccc1a 391 Pfam PF02222 ATP-grasp domain 121 293 3.2E-58 T 23-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 VV93_RS08775 861425f9107ca4ac1c9526181d0ccc1a 391 SUPERFAMILY SSF51246 317 389 1.35E-17 T 23-04-2016 IPR011054 Rudiment single hybrid motif VV93_RS08775 861425f9107ca4ac1c9526181d0ccc1a 391 PANTHER PTHR11609:SF7 1 381 6.8E-217 T 23-04-2016 VV93_RS08775 861425f9107ca4ac1c9526181d0ccc1a 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 1.2E-188 T 23-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 VV93_RS08775 861425f9107ca4ac1c9526181d0ccc1a 391 SUPERFAMILY SSF52440 2 110 6.91E-34 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS08775 861425f9107ca4ac1c9526181d0ccc1a 391 Gene3D G3DSA:3.30.1490.20 121 196 1.1E-25 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VV93_RS08775 861425f9107ca4ac1c9526181d0ccc1a 391 Gene3D G3DSA:3.30.470.20 197 387 1.3E-69 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VV93_RS08775 861425f9107ca4ac1c9526181d0ccc1a 391 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 6 390 51.357 T 23-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 VV93_RS08775 861425f9107ca4ac1c9526181d0ccc1a 391 PANTHER PTHR11609 1 381 6.8E-217 T 23-04-2016 VV93_RS05745 2b95b7701ef8f0433b5bf236c318b65d 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 8.1E-85 T 23-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 VV93_RS05745 2b95b7701ef8f0433b5bf236c318b65d 170 SMART SM00852 14 158 2.9E-27 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS05745 2b95b7701ef8f0433b5bf236c318b65d 170 PANTHER PTHR10192:SF18 4 168 3.1E-97 T 23-04-2016 VV93_RS05745 2b95b7701ef8f0433b5bf236c318b65d 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 5.7E-37 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS05745 2b95b7701ef8f0433b5bf236c318b65d 170 PANTHER PTHR10192 4 168 3.1E-97 T 23-04-2016 VV93_RS05745 2b95b7701ef8f0433b5bf236c318b65d 170 PIRSF PIRSF006443 1 166 2.5E-66 T 23-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 VV93_RS05745 2b95b7701ef8f0433b5bf236c318b65d 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 VV93_RS05745 2b95b7701ef8f0433b5bf236c318b65d 170 SUPERFAMILY SSF53218 7 168 5.63E-47 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS05745 2b95b7701ef8f0433b5bf236c318b65d 170 Gene3D G3DSA:3.40.980.10 6 166 4.8E-50 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS05745 2b95b7701ef8f0433b5bf236c318b65d 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 3.3E-34 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS05740 60061c7410f13303b5d003be585b67ce 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 1.7E-9 T 23-04-2016 VV93_RS05740 60061c7410f13303b5d003be585b67ce 329 PANTHER PTHR22960 7 285 7.7E-123 T 23-04-2016 VV93_RS05740 60061c7410f13303b5d003be585b67ce 329 SMART SM00729 14 219 9.2E-5 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VV93_RS05740 60061c7410f13303b5d003be585b67ce 329 Gene3D G3DSA:3.20.20.70 5 307 6.2E-71 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS05740 60061c7410f13303b5d003be585b67ce 329 SUPERFAMILY SSF102114 6 281 1.31E-69 T 23-04-2016 VV93_RS05740 60061c7410f13303b5d003be585b67ce 329 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 5 329 36.757 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 VV93_RS05740 60061c7410f13303b5d003be585b67ce 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 5.1E-39 T 23-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 VV93_RS05740 60061c7410f13303b5d003be585b67ce 329 Pfam PF04055 Radical SAM superfamily 19 181 5.1E-27 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VV93_RS05740 60061c7410f13303b5d003be585b67ce 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 3.5E-105 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 VV93_RS01060 cd86bc3e540f2cb073112140066c62fd 499 Gene3D G3DSA:3.40.50.300 227 497 2.7E-104 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01060 cd86bc3e540f2cb073112140066c62fd 499 Pfam PF00437 Type II/IV secretion system protein 126 391 1.1E-87 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VV93_RS01060 cd86bc3e540f2cb073112140066c62fd 499 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 12 496 7.9E-229 T 23-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 VV93_RS01060 cd86bc3e540f2cb073112140066c62fd 499 SUPERFAMILY SSF52540 106 496 1.4E-108 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01060 cd86bc3e540f2cb073112140066c62fd 499 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 319 333 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VV93_RS01060 cd86bc3e540f2cb073112140066c62fd 499 SUPERFAMILY SSF160246 12 78 9.68E-17 T 23-04-2016 VV93_RS01060 cd86bc3e540f2cb073112140066c62fd 499 Gene3D G3DSA:3.30.450.90 95 224 5.5E-55 T 23-04-2016 VV93_RS01060 cd86bc3e540f2cb073112140066c62fd 499 SMART SM00382 252 375 2.9E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS01060 cd86bc3e540f2cb073112140066c62fd 499 PANTHER PTHR30258 3 498 0.0 T 23-04-2016 VV93_RS01060 cd86bc3e540f2cb073112140066c62fd 499 PANTHER PTHR30258:SF9 3 498 0.0 T 23-04-2016 VV93_RS09410 3db5f0903c2c71ffb278e30d99bdb5dd 541 SMART SM00283 271 532 1.6E-48 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS09410 3db5f0903c2c71ffb278e30d99bdb5dd 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 531 2.9E-45 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS09410 3db5f0903c2c71ffb278e30d99bdb5dd 541 PANTHER PTHR32089 149 535 2.2E-138 T 23-04-2016 VV93_RS09410 3db5f0903c2c71ffb278e30d99bdb5dd 541 SMART SM00304 203 256 2.0E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS09410 3db5f0903c2c71ffb278e30d99bdb5dd 541 Pfam PF00672 HAMP domain 185 251 1.8E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS09410 3db5f0903c2c71ffb278e30d99bdb5dd 541 Gene3D G3DSA:1.10.287.950 286 503 1.6E-46 T 23-04-2016 VV93_RS09410 3db5f0903c2c71ffb278e30d99bdb5dd 541 PANTHER PTHR32089:SF58 149 535 2.2E-138 T 23-04-2016 VV93_RS09410 3db5f0903c2c71ffb278e30d99bdb5dd 541 SUPERFAMILY SSF58104 224 534 1.05E-59 T 23-04-2016 VV93_RS02690 7ae06b7aeb21abcf4797e73a9b38bb1b 196 PANTHER PTHR35602 5 196 1.9E-110 T 23-04-2016 VV93_RS02690 7ae06b7aeb21abcf4797e73a9b38bb1b 196 SUPERFAMILY SSF53474 5 194 5.22E-21 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS02690 7ae06b7aeb21abcf4797e73a9b38bb1b 196 Pfam PF05728 Uncharacterised protein family (UPF0227) 9 194 5.0E-70 T 23-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VV93_RS02690 7ae06b7aeb21abcf4797e73a9b38bb1b 196 Gene3D G3DSA:3.40.50.1820 6 186 5.2E-19 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS02690 7ae06b7aeb21abcf4797e73a9b38bb1b 196 PANTHER PTHR35602:SF3 5 196 1.9E-110 T 23-04-2016 VV93_RS08190 126bc1f3855a9bca5aa8b88189119b50 195 Gene3D G3DSA:3.90.550.10 7 192 2.0E-54 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS08190 126bc1f3855a9bca5aa8b88189119b50 195 Pfam PF12804 MobA-like NTP transferase domain 10 158 7.3E-33 T 23-04-2016 IPR025877 MobA-like NTP transferase VV93_RS08190 126bc1f3855a9bca5aa8b88189119b50 195 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 29.806 T 23-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 VV93_RS08190 126bc1f3855a9bca5aa8b88189119b50 195 PANTHER PTHR19136 1 193 3.0E-52 T 23-04-2016 VV93_RS08190 126bc1f3855a9bca5aa8b88189119b50 195 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 187 4.1E-74 T 23-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 VV93_RS08190 126bc1f3855a9bca5aa8b88189119b50 195 PANTHER PTHR19136:SF81 1 193 3.0E-52 T 23-04-2016 VV93_RS08190 126bc1f3855a9bca5aa8b88189119b50 195 SUPERFAMILY SSF53448 8 188 8.74E-34 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS05605 97085a0ba0d9127803fa6a1674e0fb25 371 PANTHER PTHR10174:SF116 200 367 1.8E-153 T 23-04-2016 VV93_RS05605 97085a0ba0d9127803fa6a1674e0fb25 371 PANTHER PTHR10174:SF116 105 178 1.8E-153 T 23-04-2016 VV93_RS05605 97085a0ba0d9127803fa6a1674e0fb25 371 SUPERFAMILY SSF55347 133 354 4.76E-78 T 23-04-2016 VV93_RS05605 97085a0ba0d9127803fa6a1674e0fb25 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 32.116 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS05605 97085a0ba0d9127803fa6a1674e0fb25 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 23-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS05605 97085a0ba0d9127803fa6a1674e0fb25 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 2.5E-57 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS05605 97085a0ba0d9127803fa6a1674e0fb25 371 PIRSF PIRSF000148 1 371 1.1E-66 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS05605 97085a0ba0d9127803fa6a1674e0fb25 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 120 1.5E-21 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VV93_RS05605 97085a0ba0d9127803fa6a1674e0fb25 371 SUPERFAMILY SSF51735 1 146 1.04E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS05605 97085a0ba0d9127803fa6a1674e0fb25 371 Gene3D G3DSA:3.40.50.720 1 141 1.1E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS05605 97085a0ba0d9127803fa6a1674e0fb25 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 2.1E-190 T 23-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS05605 97085a0ba0d9127803fa6a1674e0fb25 371 SMART SM00859 2 121 1.4E-23 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VV93_RS05605 97085a0ba0d9127803fa6a1674e0fb25 371 PANTHER PTHR10174 200 367 1.8E-153 T 23-04-2016 VV93_RS05605 97085a0ba0d9127803fa6a1674e0fb25 371 PANTHER PTHR10174 105 178 1.8E-153 T 23-04-2016 VV93_RS05605 97085a0ba0d9127803fa6a1674e0fb25 371 Gene3D G3DSA:3.30.360.10 142 350 3.4E-76 T 23-04-2016 VV93_RS03505 e04cda9671127b979f2c8dcdb80da269 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 3.0E-158 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VV93_RS03505 e04cda9671127b979f2c8dcdb80da269 350 Gene3D G3DSA:2.40.10.240 64 142 1.5E-16 T 23-04-2016 VV93_RS03505 e04cda9671127b979f2c8dcdb80da269 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.096 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VV93_RS03505 e04cda9671127b979f2c8dcdb80da269 350 PANTHER PTHR30307 2 345 2.5E-181 T 23-04-2016 VV93_RS03505 e04cda9671127b979f2c8dcdb80da269 350 Gene3D G3DSA:3.40.1780.10 179 345 2.0E-101 T 23-04-2016 VV93_RS03505 e04cda9671127b979f2c8dcdb80da269 350 Gene3D G3DSA:3.40.1780.10 1 62 2.0E-101 T 23-04-2016 VV93_RS03505 e04cda9671127b979f2c8dcdb80da269 350 PANTHER PTHR30307:SF0 2 345 2.5E-181 T 23-04-2016 VV93_RS03505 e04cda9671127b979f2c8dcdb80da269 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 6.7E-134 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VV93_RS03505 e04cda9671127b979f2c8dcdb80da269 350 SUPERFAMILY SSF111337 1 345 8.89E-138 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VV93_RS14025 efc6b5403396d3a9ea6b59f5ed822561 118 PANTHER PTHR38780 1 118 6.3E-44 T 23-04-2016 VV93_RS14025 efc6b5403396d3a9ea6b59f5ed822561 118 SUPERFAMILY SSF75169 3 118 1.27E-37 T 23-04-2016 IPR027396 DsrEFH-like VV93_RS14025 efc6b5403396d3a9ea6b59f5ed822561 118 Gene3D G3DSA:3.40.1260.10 3 118 1.0E-46 T 23-04-2016 IPR027396 DsrEFH-like VV93_RS14025 efc6b5403396d3a9ea6b59f5ed822561 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 1.2E-47 T 23-04-2016 IPR017462 Sulphur relay, TusC/DsrF VV93_RS14025 efc6b5403396d3a9ea6b59f5ed822561 118 PANTHER PTHR38780:SF1 1 118 6.3E-44 T 23-04-2016 VV93_RS14025 efc6b5403396d3a9ea6b59f5ed822561 118 Pfam PF02635 DsrE/DsrF-like family 4 118 5.0E-27 T 23-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein VV93_RS08060 b0f211195fd27356beb4257e3cdf9477 245 Gene3D G3DSA:3.40.50.1220 71 113 9.1E-40 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VV93_RS08060 b0f211195fd27356beb4257e3cdf9477 245 Gene3D G3DSA:3.40.50.1220 165 231 9.1E-40 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VV93_RS08060 b0f211195fd27356beb4257e3cdf9477 245 Gene3D G3DSA:3.40.50.1220 6 21 9.1E-40 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VV93_RS08060 b0f211195fd27356beb4257e3cdf9477 245 PANTHER PTHR11085:SF17 6 244 9.8E-78 T 23-04-2016 VV93_RS08060 b0f211195fd27356beb4257e3cdf9477 245 PANTHER PTHR11085 6 244 9.8E-78 T 23-04-2016 IPR003000 Sirtuin family GO:0070403 VV93_RS08060 b0f211195fd27356beb4257e3cdf9477 245 SUPERFAMILY SSF52467 6 235 1.16E-72 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VV93_RS08060 b0f211195fd27356beb4257e3cdf9477 245 Gene3D G3DSA:3.30.1600.10 114 158 3.0E-26 T 23-04-2016 IPR026591 Sirtuin family, catalytic core small domain VV93_RS08060 b0f211195fd27356beb4257e3cdf9477 245 Gene3D G3DSA:3.30.1600.10 22 61 3.0E-26 T 23-04-2016 IPR026591 Sirtuin family, catalytic core small domain VV93_RS08060 b0f211195fd27356beb4257e3cdf9477 245 Pfam PF02146 Sir2 family 13 186 1.2E-47 T 23-04-2016 IPR003000 Sirtuin family GO:0070403 VV93_RS08060 b0f211195fd27356beb4257e3cdf9477 245 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 56.989 T 23-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 Gene3D G3DSA:3.30.450.20 8 118 3.2E-11 T 23-04-2016 VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 Pfam PF13188 PAS domain 132 183 8.1E-7 T 23-04-2016 IPR000014 PAS domain VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 SMART SM00091 8 74 1.2E-4 T 23-04-2016 IPR000014 PAS domain VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 SMART SM00091 131 197 0.012 T 23-04-2016 IPR000014 PAS domain VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 PANTHER PTHR33121:SF13 372 678 3.6E-81 T 23-04-2016 VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 SMART SM00267 238 410 1.3E-51 T 23-04-2016 IPR000160 GGDEF domain VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 SUPERFAMILY SSF55785 13 118 3.66E-10 T 23-04-2016 IPR000014 PAS domain VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 PANTHER PTHR33121 372 678 3.6E-81 T 23-04-2016 VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 SUPERFAMILY SSF141868 427 674 1.57E-84 T 23-04-2016 IPR001633 EAL domain VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 Pfam PF08448 PAS fold 15 120 6.0E-9 T 23-04-2016 IPR013656 PAS fold-4 VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 Gene3D G3DSA:3.30.70.270 255 418 5.6E-51 T 23-04-2016 VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 SUPERFAMILY SSF55073 258 412 1.49E-45 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 SUPERFAMILY SSF55785 118 201 2.27E-7 T 23-04-2016 IPR000014 PAS domain VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 120 6.8E-9 T 23-04-2016 IPR000014 PAS domain VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 Gene3D G3DSA:3.30.450.20 124 197 6.2E-8 T 23-04-2016 VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 406 4.9E-42 T 23-04-2016 IPR000160 GGDEF domain VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 Gene3D G3DSA:3.20.20.450 424 674 1.7E-92 T 23-04-2016 IPR001633 EAL domain VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 SMART SM00052 420 666 3.1E-104 T 23-04-2016 IPR001633 EAL domain VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 407 8.8E-36 T 23-04-2016 IPR000160 GGDEF domain VV93_RS12150 15a8aa586565a4635a74109d14e558ab 679 Pfam PF00563 EAL domain 427 661 5.5E-72 T 23-04-2016 IPR001633 EAL domain VV93_RS12415 028b76a7df8b0bd8cb965de1d95f642e 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV93_RS12415 028b76a7df8b0bd8cb965de1d95f642e 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 23-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VV93_RS12415 028b76a7df8b0bd8cb965de1d95f642e 112 SUPERFAMILY SSF54913 1 112 2.83E-45 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VV93_RS12415 028b76a7df8b0bd8cb965de1d95f642e 112 PRINTS PR00340 P-II protein signature 52 75 9.0E-41 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV93_RS12415 028b76a7df8b0bd8cb965de1d95f642e 112 PRINTS PR00340 P-II protein signature 83 103 9.0E-41 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV93_RS12415 028b76a7df8b0bd8cb965de1d95f642e 112 PRINTS PR00340 P-II protein signature 2 17 9.0E-41 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV93_RS12415 028b76a7df8b0bd8cb965de1d95f642e 112 PRINTS PR00340 P-II protein signature 23 41 9.0E-41 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV93_RS12415 028b76a7df8b0bd8cb965de1d95f642e 112 SMART SM00938 4 105 2.7E-68 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV93_RS12415 028b76a7df8b0bd8cb965de1d95f642e 112 PANTHER PTHR30115 1 112 5.8E-80 T 23-04-2016 VV93_RS12415 028b76a7df8b0bd8cb965de1d95f642e 112 Gene3D G3DSA:3.30.70.120 1 112 2.5E-51 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VV93_RS12415 028b76a7df8b0bd8cb965de1d95f642e 112 PIRSF PIRSF039144 1 112 1.5E-55 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV93_RS12415 028b76a7df8b0bd8cb965de1d95f642e 112 PANTHER PTHR30115:SF15 1 112 5.8E-80 T 23-04-2016 VV93_RS12415 028b76a7df8b0bd8cb965de1d95f642e 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 23-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VV93_RS12420 690d717da01226740a9e6ff073a57672 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 4.0E-55 T 23-04-2016 IPR008249 Uncharacterised protein family UPF0231 VV93_RS12420 690d717da01226740a9e6ff073a57672 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 1.4E-41 T 23-04-2016 IPR008249 Uncharacterised protein family UPF0231 VV93_RS12420 690d717da01226740a9e6ff073a57672 122 PIRSF PIRSF006287 1 122 8.6E-49 T 23-04-2016 IPR008249 Uncharacterised protein family UPF0231 VV93_RS12420 690d717da01226740a9e6ff073a57672 122 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 30.595 T 23-04-2016 IPR008249 Uncharacterised protein family UPF0231 VV93_RS14670 1bd850a174b175b398a6292e3a004ade 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.384 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VV93_RS14670 1bd850a174b175b398a6292e3a004ade 233 PIRSF PIRSF002155 1 227 1.2E-79 T 23-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 VV93_RS14670 1bd850a174b175b398a6292e3a004ade 233 Gene3D G3DSA:3.30.190.20 161 225 5.5E-47 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 VV93_RS14670 1bd850a174b175b398a6292e3a004ade 233 Gene3D G3DSA:3.30.190.20 18 68 5.5E-47 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 VV93_RS14670 1bd850a174b175b398a6292e3a004ade 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 23-04-2016 IPR023673 Ribosomal protein L1, conserved site VV93_RS14670 1bd850a174b175b398a6292e3a004ade 233 Gene3D G3DSA:3.40.50.790 69 159 6.7E-41 T 23-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich VV93_RS14670 1bd850a174b175b398a6292e3a004ade 233 SUPERFAMILY SSF56808 6 225 3.01E-83 T 23-04-2016 IPR023674 Ribosomal protein L1-like VV93_RS14670 1bd850a174b175b398a6292e3a004ade 233 PANTHER PTHR23105 19 225 1.2E-82 T 23-04-2016 VV93_RS14670 1bd850a174b175b398a6292e3a004ade 233 PANTHER PTHR23105:SF5 19 225 1.2E-82 T 23-04-2016 VV93_RS14670 1bd850a174b175b398a6292e3a004ade 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 3.3E-53 T 23-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein VV93_RS14670 1bd850a174b175b398a6292e3a004ade 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 2.0E-106 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VV93_RS10575 d4b187d9066be78550b8e015e575be66 526 PANTHER PTHR26402:SF557 504 511 8.3E-21 T 23-04-2016 VV93_RS10575 d4b187d9066be78550b8e015e575be66 526 PANTHER PTHR26402:SF557 7 109 8.3E-21 T 23-04-2016 VV93_RS10575 d4b187d9066be78550b8e015e575be66 526 Gene3D G3DSA:1.25.40.10 313 395 4.8E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS10575 d4b187d9066be78550b8e015e575be66 526 Gene3D G3DSA:1.25.40.10 428 489 4.8E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS10575 d4b187d9066be78550b8e015e575be66 526 SMART SM00862 24 100 1.2E-13 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS10575 d4b187d9066be78550b8e015e575be66 526 PANTHER PTHR26402 504 511 8.3E-21 T 23-04-2016 VV93_RS10575 d4b187d9066be78550b8e015e575be66 526 PANTHER PTHR26402 7 109 8.3E-21 T 23-04-2016 VV93_RS10575 d4b187d9066be78550b8e015e575be66 526 SUPERFAMILY SSF46894 6 103 1.28E-17 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV93_RS10575 d4b187d9066be78550b8e015e575be66 526 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 1.1E-15 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS10575 d4b187d9066be78550b8e015e575be66 526 Gene3D G3DSA:1.10.10.10 7 103 2.6E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS05825 7c878e438188e3fabe97e7d99e510964 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.113 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VV93_RS05825 7c878e438188e3fabe97e7d99e510964 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 23-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VV93_RS05825 7c878e438188e3fabe97e7d99e510964 268 Gene3D G3DSA:3.20.20.70 1 267 1.7E-96 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS05825 7c878e438188e3fabe97e7d99e510964 268 PANTHER PTHR10314:SF4 74 144 1.4E-26 T 23-04-2016 VV93_RS05825 7c878e438188e3fabe97e7d99e510964 268 PANTHER PTHR10314:SF4 18 51 1.4E-26 T 23-04-2016 VV93_RS05825 7c878e438188e3fabe97e7d99e510964 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 3.4E-104 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VV93_RS05825 7c878e438188e3fabe97e7d99e510964 268 PANTHER PTHR10314 74 144 1.4E-26 T 23-04-2016 VV93_RS05825 7c878e438188e3fabe97e7d99e510964 268 PANTHER PTHR10314 18 51 1.4E-26 T 23-04-2016 VV93_RS05825 7c878e438188e3fabe97e7d99e510964 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 3.3E-98 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VV93_RS05825 7c878e438188e3fabe97e7d99e510964 268 SUPERFAMILY SSF51366 1 266 4.43E-92 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VV93_RS12155 a2df08f09b4c229ababc1d90e3d2e37d 337 Pfam PF01136 Peptidase family U32 75 336 1.7E-71 T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VV93_RS12155 a2df08f09b4c229ababc1d90e3d2e37d 337 PANTHER PTHR30217:SF3 246 336 1.7E-215 T 23-04-2016 VV93_RS12155 a2df08f09b4c229ababc1d90e3d2e37d 337 PANTHER PTHR30217:SF3 1 220 1.7E-215 T 23-04-2016 VV93_RS12155 a2df08f09b4c229ababc1d90e3d2e37d 337 PANTHER PTHR30217 246 336 1.7E-215 T 23-04-2016 VV93_RS12155 a2df08f09b4c229ababc1d90e3d2e37d 337 PANTHER PTHR30217 1 220 1.7E-215 T 23-04-2016 VV93_RS12155 a2df08f09b4c229ababc1d90e3d2e37d 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VV93_RS06095 194102b15527d935139ca0c77b161e6b 519 PANTHER PTHR11814:SF71 4 503 8.5E-174 T 23-04-2016 VV93_RS06095 194102b15527d935139ca0c77b161e6b 519 SUPERFAMILY SSF52091 416 498 5.1E-11 T 23-04-2016 IPR002645 STAS domain VV93_RS06095 194102b15527d935139ca0c77b161e6b 519 Gene3D G3DSA:3.30.750.24 415 506 1.4E-8 T 23-04-2016 IPR002645 STAS domain VV93_RS06095 194102b15527d935139ca0c77b161e6b 519 Pfam PF01740 STAS domain 417 503 1.1E-5 T 23-04-2016 IPR002645 STAS domain VV93_RS06095 194102b15527d935139ca0c77b161e6b 519 Pfam PF00916 Sulfate permease family 13 374 2.1E-57 T 23-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VV93_RS06095 194102b15527d935139ca0c77b161e6b 519 PANTHER PTHR11814 4 503 8.5E-174 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 VV93_RS13035 adadd1206d6d77de51227a5b9e2bb3cf 140 SMART SM00732 3 104 5.9E-35 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 VV93_RS13035 adadd1206d6d77de51227a5b9e2bb3cf 140 Gene3D G3DSA:3.30.420.140 3 137 4.1E-41 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 VV93_RS13035 adadd1206d6d77de51227a5b9e2bb3cf 140 SUPERFAMILY SSF53098 3 137 2.73E-37 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS13035 adadd1206d6d77de51227a5b9e2bb3cf 140 PANTHER PTHR33317 4 136 1.6E-38 T 23-04-2016 VV93_RS13035 adadd1206d6d77de51227a5b9e2bb3cf 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.469 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VV93_RS13035 adadd1206d6d77de51227a5b9e2bb3cf 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 3.5E-49 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VV93_RS13035 adadd1206d6d77de51227a5b9e2bb3cf 140 Pfam PF03652 Holliday junction resolvase 4 136 5.2E-36 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VV93_RS07455 c95f5f5eb218c0ce3d178e2e406ca5b0 109 Pfam PF04358 DsrC like protein 4 109 2.0E-44 T 23-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE VV93_RS07455 c95f5f5eb218c0ce3d178e2e406ca5b0 109 PANTHER PTHR37010:SF1 1 109 7.8E-58 T 23-04-2016 VV93_RS07455 c95f5f5eb218c0ce3d178e2e406ca5b0 109 PANTHER PTHR37010 1 109 7.8E-58 T 23-04-2016 VV93_RS07455 c95f5f5eb218c0ce3d178e2e406ca5b0 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 2.9E-49 T 23-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE VV93_RS07455 c95f5f5eb218c0ce3d178e2e406ca5b0 109 PIRSF PIRSF006223 2 109 9.9E-41 T 23-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE VV93_RS07455 c95f5f5eb218c0ce3d178e2e406ca5b0 109 Gene3D G3DSA:1.10.10.370 40 109 4.2E-36 T 23-04-2016 VV93_RS07455 c95f5f5eb218c0ce3d178e2e406ca5b0 109 SUPERFAMILY SSF69721 2 109 2.75E-41 T 23-04-2016 IPR025526 DsrC-like domain VV93_RS07455 c95f5f5eb218c0ce3d178e2e406ca5b0 109 Gene3D G3DSA:3.30.1420.10 3 39 5.7E-14 T 23-04-2016 VV93_RS12065 1def5db2c8ca936ade033d1f604ad618 459 SUPERFAMILY SSF52540 70 294 2.84E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12065 1def5db2c8ca936ade033d1f604ad618 459 SUPERFAMILY SSF54211 305 455 1.74E-41 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS12065 1def5db2c8ca936ade033d1f604ad618 459 SUPERFAMILY SSF54211 257 271 1.74E-41 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS12065 1def5db2c8ca936ade033d1f604ad618 459 PRINTS PR01874 DNA repair protein radA signature 126 143 1.2E-93 T 23-04-2016 VV93_RS12065 1def5db2c8ca936ade033d1f604ad618 459 PRINTS PR01874 DNA repair protein radA signature 85 113 1.2E-93 T 23-04-2016 VV93_RS12065 1def5db2c8ca936ade033d1f604ad618 459 PRINTS PR01874 DNA repair protein radA signature 250 276 1.2E-93 T 23-04-2016 VV93_RS12065 1def5db2c8ca936ade033d1f604ad618 459 PRINTS PR01874 DNA repair protein radA signature 215 243 1.2E-93 T 23-04-2016 VV93_RS12065 1def5db2c8ca936ade033d1f604ad618 459 PRINTS PR01874 DNA repair protein radA signature 10 34 1.2E-93 T 23-04-2016 VV93_RS12065 1def5db2c8ca936ade033d1f604ad618 459 PRINTS PR01874 DNA repair protein radA signature 176 200 1.2E-93 T 23-04-2016 VV93_RS12065 1def5db2c8ca936ade033d1f604ad618 459 PRINTS PR01874 DNA repair protein radA signature 324 347 1.2E-93 T 23-04-2016 VV93_RS12065 1def5db2c8ca936ade033d1f604ad618 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 8.5E-9 T 23-04-2016 VV93_RS12065 1def5db2c8ca936ade033d1f604ad618 459 Pfam PF13481 AAA domain 71 224 1.1E-13 T 23-04-2016 VV93_RS12065 1def5db2c8ca936ade033d1f604ad618 459 Gene3D G3DSA:3.40.50.300 61 279 2.8E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12065 1def5db2c8ca936ade033d1f604ad618 459 SMART SM00382 93 247 1.4E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS12065 1def5db2c8ca936ade033d1f604ad618 459 PANTHER PTHR32472 1 455 1.1E-224 T 23-04-2016 VV93_RS12065 1def5db2c8ca936ade033d1f604ad618 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 1.5E-226 T 23-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VV93_RS12065 1def5db2c8ca936ade033d1f604ad618 459 Gene3D G3DSA:3.30.230.10 286 455 1.2E-37 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV93_RS01185 48d5baf2e630c0eb8f97f6577c7a5733 207 SMART SM00072 3 187 2.2E-73 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VV93_RS01185 48d5baf2e630c0eb8f97f6577c7a5733 207 Gene3D G3DSA:3.30.63.10 35 87 3.4E-29 T 23-04-2016 VV93_RS01185 48d5baf2e630c0eb8f97f6577c7a5733 207 PANTHER PTHR23117:SF13 1 200 2.6E-103 T 23-04-2016 VV93_RS01185 48d5baf2e630c0eb8f97f6577c7a5733 207 Gene3D G3DSA:3.40.50.300 2 26 1.6E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01185 48d5baf2e630c0eb8f97f6577c7a5733 207 Gene3D G3DSA:3.40.50.300 88 203 1.6E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01185 48d5baf2e630c0eb8f97f6577c7a5733 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 23-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VV93_RS01185 48d5baf2e630c0eb8f97f6577c7a5733 207 Pfam PF00625 Guanylate kinase 5 185 6.8E-61 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VV93_RS01185 48d5baf2e630c0eb8f97f6577c7a5733 207 PANTHER PTHR23117 1 200 2.6E-103 T 23-04-2016 VV93_RS01185 48d5baf2e630c0eb8f97f6577c7a5733 207 SUPERFAMILY SSF52540 3 189 2.65E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01185 48d5baf2e630c0eb8f97f6577c7a5733 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 6.2E-76 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VV93_RS01185 48d5baf2e630c0eb8f97f6577c7a5733 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.717 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VV93_RS11890 08d5fcdccc1204b1084adfe244366dd6 332 PANTHER PTHR30146 1 326 3.1E-154 T 23-04-2016 VV93_RS11890 08d5fcdccc1204b1084adfe244366dd6 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 1.0E-17 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS11890 08d5fcdccc1204b1084adfe244366dd6 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.8E-6 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS11890 08d5fcdccc1204b1084adfe244366dd6 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.8E-6 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS11890 08d5fcdccc1204b1084adfe244366dd6 332 Gene3D G3DSA:1.10.260.40 1 48 1.4E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS11890 08d5fcdccc1204b1084adfe244366dd6 332 SUPERFAMILY SSF53822 76 320 2.16E-42 T 23-04-2016 IPR028082 Periplasmic binding protein-like I VV93_RS11890 08d5fcdccc1204b1084adfe244366dd6 332 SMART SM00354 1 66 5.1E-14 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS11890 08d5fcdccc1204b1084adfe244366dd6 332 SUPERFAMILY SSF47413 3 52 4.31E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS11890 08d5fcdccc1204b1084adfe244366dd6 332 Gene3D G3DSA:3.40.50.2300 165 327 1.1E-43 T 23-04-2016 VV93_RS11890 08d5fcdccc1204b1084adfe244366dd6 332 Pfam PF13377 Periplasmic binding protein-like domain 167 326 1.5E-32 T 23-04-2016 VV93_RS11890 08d5fcdccc1204b1084adfe244366dd6 332 Gene3D G3DSA:3.40.50.2300 76 164 6.8E-4 T 23-04-2016 VV93_RS11890 08d5fcdccc1204b1084adfe244366dd6 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS11890 08d5fcdccc1204b1084adfe244366dd6 332 PANTHER PTHR30146:SF28 1 326 3.1E-154 T 23-04-2016 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 Gene3D G3DSA:1.10.274.10 200 301 7.8E-30 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 5.0E-22 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 172 730 4.9E-134 T 23-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 SUPERFAMILY SSF47831 203 311 2.62E-26 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 Pfam PF01590 GAF domain 17 153 1.0E-15 T 23-04-2016 IPR003018 GAF domain GO:0005515 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 7.1E-23 T 23-04-2016 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 7.1E-23 T 23-04-2016 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 7.1E-23 T 23-04-2016 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 7.1E-23 T 23-04-2016 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 319 391 6.6E-15 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 SUPERFAMILY SSF55781 2 158 1.79E-33 T 23-04-2016 IPR029016 GAF domain-like VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 421 706 1.5E-95 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 PANTHER PTHR22931:SF23 181 715 4.7E-284 T 23-04-2016 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 SUPERFAMILY SSF51621 422 713 1.2E-97 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 Gene3D G3DSA:3.50.30.10 302 414 4.2E-29 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 Gene3D G3DSA:3.30.450.40 1 158 1.0E-45 T 23-04-2016 IPR029016 GAF domain-like VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 SUPERFAMILY SSF52009 293 412 7.72E-26 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 PANTHER PTHR22931 181 715 4.7E-284 T 23-04-2016 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 Gene3D G3DSA:3.20.20.60 424 734 7.8E-99 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS03110 7e3623b0e30f25cdc79c93b761ea947b 748 SMART SM00065 17 163 1.6E-22 T 23-04-2016 IPR003018 GAF domain GO:0005515 VV93_RS09425 6f87f739ea9caa321603bc419ffcbc0f 468 Pfam PF00155 Aminotransferase class I and II 133 447 1.7E-32 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV93_RS09425 6f87f739ea9caa321603bc419ffcbc0f 468 SMART SM00345 7 66 5.4E-15 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV93_RS09425 6f87f739ea9caa321603bc419ffcbc0f 468 PANTHER PTHR11751 82 458 1.8E-136 T 23-04-2016 VV93_RS09425 6f87f739ea9caa321603bc419ffcbc0f 468 Gene3D G3DSA:3.90.1150.10 344 465 8.8E-9 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS09425 6f87f739ea9caa321603bc419ffcbc0f 468 PANTHER PTHR11751:SF314 82 458 1.8E-136 T 23-04-2016 VV93_RS09425 6f87f739ea9caa321603bc419ffcbc0f 468 SUPERFAMILY SSF53383 83 463 6.78E-95 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS09425 6f87f739ea9caa321603bc419ffcbc0f 468 Gene3D G3DSA:3.40.640.10 142 343 1.7E-70 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS09425 6f87f739ea9caa321603bc419ffcbc0f 468 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 8.9E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV93_RS09425 6f87f739ea9caa321603bc419ffcbc0f 468 SUPERFAMILY SSF46785 1 68 7.08E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS09425 6f87f739ea9caa321603bc419ffcbc0f 468 Gene3D G3DSA:1.10.10.10 2 67 1.2E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS03215 c8ca207ddd87fec2409d66efc376ac70 387 PANTHER PTHR30605 16 385 6.6E-195 T 23-04-2016 VV93_RS03215 c8ca207ddd87fec2409d66efc376ac70 387 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 22 386 42.694 T 23-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 VV93_RS03215 c8ca207ddd87fec2409d66efc376ac70 387 Gene3D G3DSA:3.30.420.40 23 214 2.6E-75 T 23-04-2016 VV93_RS03215 c8ca207ddd87fec2409d66efc376ac70 387 Pfam PF03702 Uncharacterised protein family (UPF0075) 23 386 7.3E-168 T 23-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 VV93_RS03215 c8ca207ddd87fec2409d66efc376ac70 387 PANTHER PTHR30605:SF2 16 385 6.6E-195 T 23-04-2016 VV93_RS03215 c8ca207ddd87fec2409d66efc376ac70 387 SUPERFAMILY SSF53067 84 129 3.42E-29 T 23-04-2016 VV93_RS03215 c8ca207ddd87fec2409d66efc376ac70 387 SUPERFAMILY SSF53067 161 361 3.42E-29 T 23-04-2016 VV93_RS03215 c8ca207ddd87fec2409d66efc376ac70 387 SUPERFAMILY SSF53067 23 57 3.42E-29 T 23-04-2016 VV93_RS05910 4255a462befcb2a6390842fee14ecde7 610 SUPERFAMILY SSF46600 190 243 1.23E-12 T 23-04-2016 IPR001943 UVR domain GO:0005515 VV93_RS05910 4255a462befcb2a6390842fee14ecde7 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 589 9.9E-210 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 VV93_RS05910 4255a462befcb2a6390842fee14ecde7 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 28.161 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 VV93_RS05910 4255a462befcb2a6390842fee14ecde7 610 Gene3D G3DSA:4.10.860.10 183 243 1.4E-16 T 23-04-2016 IPR001943 UVR domain GO:0005515 VV93_RS05910 4255a462befcb2a6390842fee14ecde7 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 391 542 1.6E-42 T 23-04-2016 IPR001162 UvrC family homology region VV93_RS05910 4255a462befcb2a6390842fee14ecde7 610 Gene3D G3DSA:3.40.1440.10 17 97 9.4E-12 T 23-04-2016 IPR027299 GIY-YIG domain VV93_RS05910 4255a462befcb2a6390842fee14ecde7 610 Gene3D G3DSA:1.10.150.20 555 609 1.1E-22 T 23-04-2016 VV93_RS05910 4255a462befcb2a6390842fee14ecde7 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 3.1E-12 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily VV93_RS05910 4255a462befcb2a6390842fee14ecde7 610 Pfam PF02151 UvrB/uvrC motif 205 238 3.7E-8 T 23-04-2016 IPR001943 UVR domain GO:0005515 VV93_RS05910 4255a462befcb2a6390842fee14ecde7 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 1.5E-9 T 23-04-2016 VV93_RS05910 4255a462befcb2a6390842fee14ecde7 610 SUPERFAMILY SSF82771 16 100 3.27E-23 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily VV93_RS05910 4255a462befcb2a6390842fee14ecde7 610 PANTHER PTHR30562:SF1 9 608 1.7E-277 T 23-04-2016 VV93_RS05910 4255a462befcb2a6390842fee14ecde7 610 PANTHER PTHR30562 9 608 1.7E-277 T 23-04-2016 VV93_RS05910 4255a462befcb2a6390842fee14ecde7 610 SMART SM00278 556 575 0.24 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VV93_RS05910 4255a462befcb2a6390842fee14ecde7 610 SMART SM00278 588 607 340.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VV93_RS05910 4255a462befcb2a6390842fee14ecde7 610 SUPERFAMILY SSF47781 521 609 2.67E-19 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VV93_RS05910 4255a462befcb2a6390842fee14ecde7 610 SMART SM00465 17 98 1.1E-22 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily VV93_RS14060 5af3001a5373deb738f4df1ef0ade305 199 PANTHER PTHR10516:SF316 1 83 1.8E-61 T 23-04-2016 VV93_RS14060 5af3001a5373deb738f4df1ef0ade305 199 PANTHER PTHR10516:SF316 129 197 1.8E-61 T 23-04-2016 VV93_RS14060 5af3001a5373deb738f4df1ef0ade305 199 SUPERFAMILY SSF54534 2 140 3.14E-37 T 23-04-2016 VV93_RS14060 5af3001a5373deb738f4df1ef0ade305 199 PANTHER PTHR10516 1 83 1.8E-61 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VV93_RS14060 5af3001a5373deb738f4df1ef0ade305 199 PANTHER PTHR10516 129 197 1.8E-61 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VV93_RS14060 5af3001a5373deb738f4df1ef0ade305 199 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 1.4E-13 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VV93_RS14060 5af3001a5373deb738f4df1ef0ade305 199 Gene3D G3DSA:3.10.50.40 126 141 5.8E-21 T 23-04-2016 VV93_RS14060 5af3001a5373deb738f4df1ef0ade305 199 Gene3D G3DSA:3.10.50.40 2 80 5.8E-21 T 23-04-2016 VV93_RS10775 043a7b58e29991d5accad7f63f7a0e23 377 SUPERFAMILY SSF51735 93 258 1.13E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS10775 043a7b58e29991d5accad7f63f7a0e23 377 Gene3D G3DSA:3.40.50.720 116 259 4.2E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS10775 043a7b58e29991d5accad7f63f7a0e23 377 PANTHER PTHR10996 1 331 6.9E-170 T 23-04-2016 VV93_RS10775 043a7b58e29991d5accad7f63f7a0e23 377 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 284 1.3E-22 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 VV93_RS10775 043a7b58e29991d5accad7f63f7a0e23 377 Gene3D G3DSA:3.40.50.720 1 115 1.7E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS10775 043a7b58e29991d5accad7f63f7a0e23 377 PANTHER PTHR10996:SF111 1 331 6.9E-170 T 23-04-2016 VV93_RS10775 043a7b58e29991d5accad7f63f7a0e23 377 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 1.3E-28 T 23-04-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 VV93_RS10775 043a7b58e29991d5accad7f63f7a0e23 377 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 46.198 T 23-04-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 VV93_RS10775 043a7b58e29991d5accad7f63f7a0e23 377 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 257 2.7E-34 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VV93_RS10775 043a7b58e29991d5accad7f63f7a0e23 377 SUPERFAMILY SSF52283 1 109 4.25E-23 T 23-04-2016 VV93_RS10775 043a7b58e29991d5accad7f63f7a0e23 377 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VV93_RS13955 25f2a093649aa7fff41916bdff554c0a 335 SUPERFAMILY SSF56655 1 324 4.94E-108 T 23-04-2016 VV93_RS13955 25f2a093649aa7fff41916bdff554c0a 335 PIRSF PIRSF004532 1 332 6.9E-136 T 23-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VV93_RS13955 25f2a093649aa7fff41916bdff554c0a 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 1.8E-129 T 23-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VV93_RS13955 25f2a093649aa7fff41916bdff554c0a 335 Gene3D G3DSA:3.30.540.10 171 329 1.8E-46 T 23-04-2016 VV93_RS13955 25f2a093649aa7fff41916bdff554c0a 335 Gene3D G3DSA:3.30.540.10 1 170 4.7E-66 T 23-04-2016 VV93_RS13955 25f2a093649aa7fff41916bdff554c0a 335 PANTHER PTHR30447 1 335 3.5E-179 T 23-04-2016 VV93_RS13955 25f2a093649aa7fff41916bdff554c0a 335 PANTHER PTHR30447:SF0 1 335 3.5E-179 T 23-04-2016 VV93_RS13955 25f2a093649aa7fff41916bdff554c0a 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 328 3.9E-168 T 23-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 SMART SM00091 98 164 1.7E-5 T 23-04-2016 IPR000014 PAS domain VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 Gene3D G3DSA:3.30.565.10 259 427 7.8E-42 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 SMART SM00387 317 429 3.3E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 427 1.2E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 Pfam PF00989 PAS fold 99 187 1.9E-7 T 23-04-2016 IPR013767 PAS fold GO:0006355 VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 Gene3D G3DSA:3.30.450.20 98 196 4.5E-11 T 23-04-2016 VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 PANTHER PTHR24423 1 432 2.7E-213 T 23-04-2016 VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 SUPERFAMILY SSF55785 86 197 1.08E-11 T 23-04-2016 IPR000014 PAS domain VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 4.1E-31 T 23-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 SMART SM00388 205 272 1.2E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 Gene3D G3DSA:1.10.287.130 197 258 1.2E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 1.6E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 SUPERFAMILY SSF55874 261 427 3.27E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 7.9E-138 T 23-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 SUPERFAMILY SSF47384 192 272 1.31E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 PANTHER PTHR24423:SF554 1 432 2.7E-213 T 23-04-2016 VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 5.0E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 5.0E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 5.0E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS03405 aaf6420b83991779f61d652157cae3a8 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 5.0E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS04635 ff42d53441b4d94edb506afa7a37b60f 375 Pfam PF00700 Bacterial flagellin C-terminal helical region 290 374 7.4E-21 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS04635 ff42d53441b4d94edb506afa7a37b60f 375 Pfam PF07196 Flagellin hook IN motif 194 243 1.6E-6 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VV93_RS04635 ff42d53441b4d94edb506afa7a37b60f 375 PANTHER PTHR30244 2 374 1.4E-109 T 23-04-2016 VV93_RS04635 ff42d53441b4d94edb506afa7a37b60f 375 PANTHER PTHR30244:SF1 2 374 1.4E-109 T 23-04-2016 VV93_RS04635 ff42d53441b4d94edb506afa7a37b60f 375 Gene3D G3DSA:1.20.1330.10 277 330 1.1E-47 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS04635 ff42d53441b4d94edb506afa7a37b60f 375 Gene3D G3DSA:1.20.1330.10 55 169 1.1E-47 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS04635 ff42d53441b4d94edb506afa7a37b60f 375 PRINTS PR00207 Flagellin signature 36 53 5.1E-21 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV93_RS04635 ff42d53441b4d94edb506afa7a37b60f 375 PRINTS PR00207 Flagellin signature 75 94 5.1E-21 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV93_RS04635 ff42d53441b4d94edb506afa7a37b60f 375 PRINTS PR00207 Flagellin signature 110 133 5.1E-21 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV93_RS04635 ff42d53441b4d94edb506afa7a37b60f 375 SUPERFAMILY SSF64518 1 374 1.7E-78 T 23-04-2016 VV93_RS04635 ff42d53441b4d94edb506afa7a37b60f 375 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 2.0E-34 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS13100 601af6f81923a5c7e9121aa856320da4 350 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 23-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site VV93_RS13100 601af6f81923a5c7e9121aa856320da4 350 SMART SM00478 37 188 8.8E-46 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VV93_RS13100 601af6f81923a5c7e9121aa856320da4 350 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 269 3.2E-125 T 23-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 VV93_RS13100 601af6f81923a5c7e9121aa856320da4 350 PANTHER PTHR10359 1 342 9.2E-101 T 23-04-2016 VV93_RS13100 601af6f81923a5c7e9121aa856320da4 350 SUPERFAMILY SSF48150 3 223 9.89E-75 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VV93_RS13100 601af6f81923a5c7e9121aa856320da4 350 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 7.0E-4 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 VV93_RS13100 601af6f81923a5c7e9121aa856320da4 350 Pfam PF14815 NUDIX domain 231 343 5.1E-22 T 23-04-2016 IPR029119 MutY, C-terminal VV93_RS13100 601af6f81923a5c7e9121aa856320da4 350 Gene3D G3DSA:1.10.1670.10 120 222 2.6E-39 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VV93_RS13100 601af6f81923a5c7e9121aa856320da4 350 SUPERFAMILY SSF55811 218 345 2.43E-26 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS13100 601af6f81923a5c7e9121aa856320da4 350 Gene3D G3DSA:3.90.79.10 227 345 3.0E-21 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS13100 601af6f81923a5c7e9121aa856320da4 350 SMART SM00525 189 209 1.5E-4 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 VV93_RS13100 601af6f81923a5c7e9121aa856320da4 350 Gene3D G3DSA:1.10.340.30 20 119 2.1E-43 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VV93_RS13100 601af6f81923a5c7e9121aa856320da4 350 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 166 3.1E-21 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VV93_RS09580 ed163dd4ac6c0ff1df808dfa900938d2 172 PANTHER PTHR36570 1 172 2.5E-82 T 23-04-2016 VV93_RS09580 ed163dd4ac6c0ff1df808dfa900938d2 172 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 21.991 T 23-04-2016 IPR022920 Disulphide bond formation protein DsbB VV93_RS09580 ed163dd4ac6c0ff1df808dfa900938d2 172 SUPERFAMILY SSF158442 17 163 8.11E-44 T 23-04-2016 VV93_RS09580 ed163dd4ac6c0ff1df808dfa900938d2 172 Gene3D G3DSA:1.20.1550.10 5 171 2.2E-63 T 23-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain VV93_RS09580 ed163dd4ac6c0ff1df808dfa900938d2 172 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 1.6E-43 T 23-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 VV93_RS09580 ed163dd4ac6c0ff1df808dfa900938d2 172 PANTHER PTHR36570:SF2 1 172 2.5E-82 T 23-04-2016 VV93_RS04310 6bef780a12ccc37de8a57abdd4fc74fe 474 SUPERFAMILY SSF102114 123 374 4.05E-62 T 23-04-2016 VV93_RS04310 6bef780a12ccc37de8a57abdd4fc74fe 474 PANTHER PTHR11918:SF43 1 474 9.8E-230 T 23-04-2016 VV93_RS04310 6bef780a12ccc37de8a57abdd4fc74fe 474 SMART SM00729 147 367 1.5E-64 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VV93_RS04310 6bef780a12ccc37de8a57abdd4fc74fe 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.818 T 23-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 VV93_RS04310 6bef780a12ccc37de8a57abdd4fc74fe 474 Pfam PF01938 TRAM domain 379 440 4.7E-18 T 23-04-2016 IPR002792 TRAM domain VV93_RS04310 6bef780a12ccc37de8a57abdd4fc74fe 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 3.0E-198 T 23-04-2016 VV93_RS04310 6bef780a12ccc37de8a57abdd4fc74fe 474 Gene3D G3DSA:3.80.30.20 147 377 4.5E-78 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VV93_RS04310 6bef780a12ccc37de8a57abdd4fc74fe 474 PANTHER PTHR11918 1 474 9.8E-230 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein VV93_RS04310 6bef780a12ccc37de8a57abdd4fc74fe 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.2E-29 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 VV93_RS04310 6bef780a12ccc37de8a57abdd4fc74fe 474 Pfam PF04055 Radical SAM superfamily 151 325 3.8E-28 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VV93_RS04310 6bef780a12ccc37de8a57abdd4fc74fe 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 VV93_RS04310 6bef780a12ccc37de8a57abdd4fc74fe 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 1.7E-152 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 VV93_RS03465 11c829743cabe6721c04844bcfb83750 258 Gene3D G3DSA:3.40.50.300 3 242 1.4E-110 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03465 11c829743cabe6721c04844bcfb83750 258 PANTHER PTHR34383:SF1 2 258 3.0E-185 T 23-04-2016 VV93_RS03465 11c829743cabe6721c04844bcfb83750 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 228 4.5E-116 T 23-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 VV93_RS03465 11c829743cabe6721c04844bcfb83750 258 SUPERFAMILY SSF52540 35 222 9.59E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03465 11c829743cabe6721c04844bcfb83750 258 PIRSF PIRSF028756 1 258 8.8E-134 T 23-04-2016 IPR016898 Polyphosphate kinase 2 VV93_RS03465 11c829743cabe6721c04844bcfb83750 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 4 228 1.5E-115 T 23-04-2016 IPR022488 Polyphosphate kinase-2-related VV93_RS03465 11c829743cabe6721c04844bcfb83750 258 PANTHER PTHR34383 2 258 3.0E-185 T 23-04-2016 VV93_RS20535 005d864dde8fd7aefe75b7d111366ef4 74 SUPERFAMILY SSF53218 3 72 3.66E-21 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS20535 005d864dde8fd7aefe75b7d111366ef4 74 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 28 41 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 VV93_RS20535 005d864dde8fd7aefe75b7d111366ef4 74 PANTHER PTHR10192 1 74 1.6E-36 T 23-04-2016 VV93_RS20535 005d864dde8fd7aefe75b7d111366ef4 74 Gene3D G3DSA:3.40.980.10 1 72 2.2E-22 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS20535 005d864dde8fd7aefe75b7d111366ef4 74 Pfam PF00994 Probable molybdopterin binding domain 4 69 1.5E-16 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS20535 005d864dde8fd7aefe75b7d111366ef4 74 PANTHER PTHR10192:SF18 1 74 1.6E-36 T 23-04-2016 VV93_RS13840 3b6184f8f61fccdd64a730718f75bd92 299 PANTHER PTHR30346:SF15 1 293 5.2E-129 T 23-04-2016 VV93_RS13840 3b6184f8f61fccdd64a730718f75bd92 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS13840 3b6184f8f61fccdd64a730718f75bd92 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS13840 3b6184f8f61fccdd64a730718f75bd92 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS13840 3b6184f8f61fccdd64a730718f75bd92 299 Gene3D G3DSA:3.40.190.10 89 173 2.7E-22 T 23-04-2016 VV93_RS13840 3b6184f8f61fccdd64a730718f75bd92 299 PANTHER PTHR30346 1 293 5.2E-129 T 23-04-2016 VV93_RS13840 3b6184f8f61fccdd64a730718f75bd92 299 SUPERFAMILY SSF53850 89 293 2.27E-38 T 23-04-2016 VV93_RS13840 3b6184f8f61fccdd64a730718f75bd92 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.9E-20 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS13840 3b6184f8f61fccdd64a730718f75bd92 299 Gene3D G3DSA:1.10.10.10 1 83 1.6E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS13840 3b6184f8f61fccdd64a730718f75bd92 299 Pfam PF03466 LysR substrate binding domain 89 292 4.5E-43 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS13840 3b6184f8f61fccdd64a730718f75bd92 299 SUPERFAMILY SSF46785 1 86 3.98E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS13840 3b6184f8f61fccdd64a730718f75bd92 299 Gene3D G3DSA:3.40.190.10 174 267 2.2E-30 T 23-04-2016 VV93_RS08900 0c8d6bcc20fffc65473bb9740de7ce16 514 PANTHER PTHR32089 121 514 2.1E-98 T 23-04-2016 VV93_RS08900 0c8d6bcc20fffc65473bb9740de7ce16 514 Pfam PF00672 HAMP domain 164 233 3.6E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS08900 0c8d6bcc20fffc65473bb9740de7ce16 514 Gene3D G3DSA:1.10.287.950 266 483 2.0E-50 T 23-04-2016 VV93_RS08900 0c8d6bcc20fffc65473bb9740de7ce16 514 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 316 511 2.7E-41 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS08900 0c8d6bcc20fffc65473bb9740de7ce16 514 SUPERFAMILY SSF58104 204 513 1.83E-68 T 23-04-2016 VV93_RS08900 0c8d6bcc20fffc65473bb9740de7ce16 514 SMART SM00283 251 512 7.0E-65 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS08900 0c8d6bcc20fffc65473bb9740de7ce16 514 SMART SM00304 182 236 9.5E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS12845 6f83b778f4debc145b7a4941276db046 320 Gene3D G3DSA:3.40.50.300 22 211 1.0E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12845 6f83b778f4debc145b7a4941276db046 320 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 26 187 1.8E-39 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VV93_RS12845 6f83b778f4debc145b7a4941276db046 320 Hamap MF_00367 GTPase Era [era]. 24 316 35.717 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 VV93_RS12845 6f83b778f4debc145b7a4941276db046 320 Pfam PF07650 KH domain 227 304 4.3E-21 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 VV93_RS12845 6f83b778f4debc145b7a4941276db046 320 Gene3D G3DSA:3.30.300.20 212 313 2.5E-39 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta VV93_RS12845 6f83b778f4debc145b7a4941276db046 320 SUPERFAMILY SSF54814 200 316 3.6E-41 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VV93_RS12845 6f83b778f4debc145b7a4941276db046 320 TIGRFAM TIGR00436 era: GTP-binding protein Era 27 299 1.3E-109 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 VV93_RS12845 6f83b778f4debc145b7a4941276db046 320 Pfam PF01926 50S ribosome-binding GTPase 29 143 1.6E-23 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS12845 6f83b778f4debc145b7a4941276db046 320 PANTHER PTHR11649 7 319 6.5E-122 T 23-04-2016 VV93_RS12845 6f83b778f4debc145b7a4941276db046 320 SUPERFAMILY SSF52540 29 224 7.02E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12845 6f83b778f4debc145b7a4941276db046 320 PANTHER PTHR11649:SF3 7 319 6.5E-122 T 23-04-2016 VV93_RS10810 b44ea531a8946aa0a5ffebceab3bfa1a 310 Gene3D G3DSA:3.40.50.150 108 289 1.4E-52 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS10810 b44ea531a8946aa0a5ffebceab3bfa1a 310 PANTHER PTHR18895:SF66 4 299 1.5E-179 T 23-04-2016 VV93_RS10810 b44ea531a8946aa0a5ffebceab3bfa1a 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 299 1.7E-95 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VV93_RS10810 b44ea531a8946aa0a5ffebceab3bfa1a 310 PANTHER PTHR18895 4 299 1.5E-179 T 23-04-2016 VV93_RS10810 b44ea531a8946aa0a5ffebceab3bfa1a 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 1.2E-136 T 23-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VV93_RS10810 b44ea531a8946aa0a5ffebceab3bfa1a 310 Pfam PF05175 Methyltransferase small domain 135 217 2.3E-17 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VV93_RS10810 b44ea531a8946aa0a5ffebceab3bfa1a 310 SUPERFAMILY SSF53335 16 293 1.33E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS10810 b44ea531a8946aa0a5ffebceab3bfa1a 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV93_RS10810 b44ea531a8946aa0a5ffebceab3bfa1a 310 Gene3D G3DSA:1.10.8.10 27 106 1.8E-5 T 23-04-2016 VV93_RS10810 b44ea531a8946aa0a5ffebceab3bfa1a 310 PIRSF PIRSF037167 2 307 2.5E-148 T 23-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VV93_RS10810 b44ea531a8946aa0a5ffebceab3bfa1a 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.649 T 23-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VV93_RS01890 e59cf10e460999beb540b76881ed0a06 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 4.5E-27 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 VV93_RS01890 e59cf10e460999beb540b76881ed0a06 58 PANTHER PTHR15892 1 58 3.2E-30 T 23-04-2016 VV93_RS01890 e59cf10e460999beb540b76881ed0a06 58 SUPERFAMILY SSF55129 1 58 2.75E-23 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VV93_RS01890 e59cf10e460999beb540b76881ed0a06 58 PIRSF PIRSF002211 1 58 7.3E-29 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 VV93_RS01890 e59cf10e460999beb540b76881ed0a06 58 Gene3D G3DSA:3.30.1390.20 1 58 5.2E-33 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VV93_RS01890 e59cf10e460999beb540b76881ed0a06 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 3.8E-21 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VV93_RS01890 e59cf10e460999beb540b76881ed0a06 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.14 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 VV93_RS01890 e59cf10e460999beb540b76881ed0a06 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 23-04-2016 IPR018038 Ribosomal protein L30, conserved site VV93_RS10235 ab1e3f0d4ac5ba72ce40ca118f59a77e 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 23-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VV93_RS10235 ab1e3f0d4ac5ba72ce40ca118f59a77e 405 PANTHER PTHR22572:SF10 5 377 4.1E-154 T 23-04-2016 VV93_RS10235 ab1e3f0d4ac5ba72ce40ca118f59a77e 405 SUPERFAMILY SSF51161 293 403 3.68E-14 T 23-04-2016 IPR011004 Trimeric LpxA-like VV93_RS10235 ab1e3f0d4ac5ba72ce40ca118f59a77e 405 SUPERFAMILY SSF53448 4 275 5.16E-70 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS10235 ab1e3f0d4ac5ba72ce40ca118f59a77e 405 SUPERFAMILY SSF53448 341 358 5.16E-70 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS10235 ab1e3f0d4ac5ba72ce40ca118f59a77e 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 23-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VV93_RS10235 ab1e3f0d4ac5ba72ce40ca118f59a77e 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.48 T 23-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VV93_RS10235 ab1e3f0d4ac5ba72ce40ca118f59a77e 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 23-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VV93_RS10235 ab1e3f0d4ac5ba72ce40ca118f59a77e 405 Pfam PF00483 Nucleotidyl transferase 6 273 1.2E-63 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VV93_RS10235 ab1e3f0d4ac5ba72ce40ca118f59a77e 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 2.4E-153 T 23-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VV93_RS10235 ab1e3f0d4ac5ba72ce40ca118f59a77e 405 Gene3D G3DSA:3.90.550.10 324 367 2.5E-73 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS10235 ab1e3f0d4ac5ba72ce40ca118f59a77e 405 Gene3D G3DSA:3.90.550.10 6 282 2.5E-73 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS10235 ab1e3f0d4ac5ba72ce40ca118f59a77e 405 PANTHER PTHR22572 5 377 4.1E-154 T 23-04-2016 VV93_RS07010 6fb2fa97579b3712df5e160f02ead2e8 442 PANTHER PTHR10799 154 428 3.7E-25 T 23-04-2016 VV93_RS07010 6fb2fa97579b3712df5e160f02ead2e8 442 SUPERFAMILY SSF49785 40 212 3.23E-16 T 23-04-2016 IPR008979 Galactose-binding domain-like VV93_RS07010 6fb2fa97579b3712df5e160f02ead2e8 442 SMART SM00267 264 431 5.0E-49 T 23-04-2016 IPR000160 GGDEF domain VV93_RS07010 6fb2fa97579b3712df5e160f02ead2e8 442 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 273 431 2.9E-42 T 23-04-2016 IPR000160 GGDEF domain VV93_RS07010 6fb2fa97579b3712df5e160f02ead2e8 442 PANTHER PTHR10799:SF750 154 428 3.7E-25 T 23-04-2016 VV93_RS07010 6fb2fa97579b3712df5e160f02ead2e8 442 SUPERFAMILY SSF55073 280 430 1.33E-39 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS07010 6fb2fa97579b3712df5e160f02ead2e8 442 Pfam PF00990 Diguanylate cyclase, GGDEF domain 275 427 6.7E-39 T 23-04-2016 IPR000160 GGDEF domain VV93_RS07010 6fb2fa97579b3712df5e160f02ead2e8 442 Gene3D G3DSA:3.30.70.270 277 430 1.1E-46 T 23-04-2016 VV93_RS14215 1a63b763f0d254631b870d82f5cb1486 315 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 308 29.866 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 VV93_RS14215 1a63b763f0d254631b870d82f5cb1486 315 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 8.1E-116 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 VV93_RS14215 1a63b763f0d254631b870d82f5cb1486 315 PANTHER PTHR11088 6 292 1.4E-117 T 23-04-2016 VV93_RS14215 1a63b763f0d254631b870d82f5cb1486 315 Gene3D G3DSA:1.10.287.890 203 285 1.6E-34 T 23-04-2016 VV93_RS14215 1a63b763f0d254631b870d82f5cb1486 315 SUPERFAMILY SSF52540 10 153 4.79E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14215 1a63b763f0d254631b870d82f5cb1486 315 Gene3D G3DSA:3.40.50.300 8 174 5.5E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14215 1a63b763f0d254631b870d82f5cb1486 315 Pfam PF01715 IPP transferase 42 286 5.0E-87 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 Pfam PF04539 Sigma-70 region 3 171 244 4.2E-22 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 46 325 4.6E-138 T 23-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 15 325 39.499 T 23-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 SUPERFAMILY SSF88946 53 161 1.38E-45 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 Pfam PF04542 Sigma-70 region 2 91 160 6.4E-20 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 Gene3D G3DSA:1.10.10.10 164 213 3.4E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 Pfam PF00140 Sigma-70 factor, region 1.2 53 86 4.4E-12 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 PANTHER PTHR30603 1 330 2.8E-184 T 23-04-2016 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 115 128 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 Gene3D G3DSA:1.10.601.10 24 160 5.1E-58 T 23-04-2016 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 PANTHER PTHR30603:SF15 1 330 2.8E-184 T 23-04-2016 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 SUPERFAMILY SSF88659 221 320 2.62E-25 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 SUPERFAMILY SSF88659 164 237 5.23E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 284 310 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 Gene3D G3DSA:1.10.10.10 256 319 2.9E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 Pfam PF04545 Sigma-70, region 4 259 312 5.8E-18 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 87 313 2.0E-36 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 PRINTS PR00046 Major sigma-70 factor signature 139 147 6.4E-28 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 PRINTS PR00046 Major sigma-70 factor signature 284 299 6.4E-28 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 PRINTS PR00046 Major sigma-70 factor signature 263 275 6.4E-28 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 PRINTS PR00046 Major sigma-70 factor signature 299 310 6.4E-28 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12745 28b3954ec23348263f172c3373c36b27 330 PRINTS PR00046 Major sigma-70 factor signature 115 128 6.4E-28 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS04245 cfe6c4a348428d5358ca40f590ffe7be 264 Pfam PF03330 Lytic transglycolase 81 170 5.2E-28 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VV93_RS04245 cfe6c4a348428d5358ca40f590ffe7be 264 Pfam PF05036 Sporulation related domain 187 258 1.9E-9 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 VV93_RS04245 cfe6c4a348428d5358ca40f590ffe7be 264 Gene3D G3DSA:2.40.40.10 120 171 7.7E-6 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VV93_RS04245 cfe6c4a348428d5358ca40f590ffe7be 264 PANTHER PTHR34183 14 241 7.0E-88 T 23-04-2016 VV93_RS04245 cfe6c4a348428d5358ca40f590ffe7be 264 Gene3D G3DSA:3.30.70.1070 186 258 1.4E-10 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 VV93_RS04245 cfe6c4a348428d5358ca40f590ffe7be 264 SUPERFAMILY SSF110997 186 258 1.96E-11 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 VV93_RS04245 cfe6c4a348428d5358ca40f590ffe7be 264 PANTHER PTHR34183:SF1 14 241 7.0E-88 T 23-04-2016 VV93_RS04245 cfe6c4a348428d5358ca40f590ffe7be 264 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 83 248 6.1E-46 T 23-04-2016 IPR012997 Rare lipoprotein A VV93_RS04245 cfe6c4a348428d5358ca40f590ffe7be 264 SUPERFAMILY SSF50685 83 171 1.12E-10 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VV93_RS07000 c77a84e822b350d4d6bb26ae2676d2e0 414 SUPERFAMILY SSF53383 5 410 2.69E-97 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS07000 c77a84e822b350d4d6bb26ae2676d2e0 414 PANTHER PTHR11601:SF22 1 410 2.9E-143 T 23-04-2016 VV93_RS07000 c77a84e822b350d4d6bb26ae2676d2e0 414 Gene3D G3DSA:3.90.1150.10 269 410 3.6E-38 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS07000 c77a84e822b350d4d6bb26ae2676d2e0 414 Pfam PF00266 Aminotransferase class-V 26 401 1.2E-70 T 23-04-2016 IPR000192 Aminotransferase class V domain VV93_RS07000 c77a84e822b350d4d6bb26ae2676d2e0 414 Gene3D G3DSA:3.40.640.10 36 268 3.8E-62 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS07000 c77a84e822b350d4d6bb26ae2676d2e0 414 PANTHER PTHR11601 1 410 2.9E-143 T 23-04-2016 VV93_RS07000 c77a84e822b350d4d6bb26ae2676d2e0 414 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 5 404 9.4E-165 T 23-04-2016 IPR011340 Cysteine desulfurase-related VV93_RS01735 b5fa9c0a37cf34fdfd8caf8e80ab86d6 374 SUPERFAMILY SSF53756 18 365 7.33E-60 T 23-04-2016 VV93_RS01735 b5fa9c0a37cf34fdfd8caf8e80ab86d6 374 PANTHER PTHR12526 138 365 2.0E-45 T 23-04-2016 VV93_RS01735 b5fa9c0a37cf34fdfd8caf8e80ab86d6 374 Pfam PF00534 Glycosyl transferases group 1 190 345 1.7E-30 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 VV93_RS01735 b5fa9c0a37cf34fdfd8caf8e80ab86d6 374 Pfam PF13477 Glycosyl transferase 4-like 2 153 2.9E-10 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VV93_RS01735 b5fa9c0a37cf34fdfd8caf8e80ab86d6 374 Gene3D G3DSA:3.40.50.2000 190 346 8.8E-25 T 23-04-2016 VV93_RS12140 4d8da69b9e26578aee913c4783336fee 167 PANTHER PTHR23091:SF237 1 164 2.4E-21 T 23-04-2016 VV93_RS12140 4d8da69b9e26578aee913c4783336fee 167 SUPERFAMILY SSF55729 1 130 3.72E-25 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS12140 4d8da69b9e26578aee913c4783336fee 167 PANTHER PTHR23091 1 164 2.4E-21 T 23-04-2016 VV93_RS12140 4d8da69b9e26578aee913c4783336fee 167 Pfam PF13527 Acetyltransferase (GNAT) domain 3 123 1.7E-10 T 23-04-2016 VV93_RS12140 4d8da69b9e26578aee913c4783336fee 167 Gene3D G3DSA:3.40.630.30 1 127 9.4E-19 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS05330 449ddc34d7e74b5ee0184843bc01fa77 329 SMART SM00922 117 214 1.8E-6 T 23-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VV93_RS05330 449ddc34d7e74b5ee0184843bc01fa77 329 SUPERFAMILY SSF54826 1 101 2.28E-25 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV93_RS05330 449ddc34d7e74b5ee0184843bc01fa77 329 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 321 23.129 T 23-04-2016 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 VV93_RS05330 449ddc34d7e74b5ee0184843bc01fa77 329 PANTHER PTHR13794:SF8 6 318 3.1E-89 T 23-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 VV93_RS05330 449ddc34d7e74b5ee0184843bc01fa77 329 Gene3D G3DSA:3.30.390.10 1 124 2.8E-27 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV93_RS05330 449ddc34d7e74b5ee0184843bc01fa77 329 Pfam PF13378 Enolase C-terminal domain-like 126 278 5.9E-12 T 23-04-2016 IPR029065 Enolase C-terminal domain-like VV93_RS05330 449ddc34d7e74b5ee0184843bc01fa77 329 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 312 3.0E-108 T 23-04-2016 VV93_RS05330 449ddc34d7e74b5ee0184843bc01fa77 329 SUPERFAMILY SSF51604 103 316 3.41E-49 T 23-04-2016 IPR029065 Enolase C-terminal domain-like VV93_RS05330 449ddc34d7e74b5ee0184843bc01fa77 329 Gene3D G3DSA:3.20.20.120 125 304 2.1E-43 T 23-04-2016 IPR029065 Enolase C-terminal domain-like VV93_RS05330 449ddc34d7e74b5ee0184843bc01fa77 329 PANTHER PTHR13794 6 318 3.1E-89 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 VV93_RS05765 ab8025e258330f2983f739534167c203 543 PANTHER PTHR30290:SF23 24 541 9.2E-203 T 23-04-2016 VV93_RS05765 ab8025e258330f2983f739534167c203 543 Gene3D G3DSA:3.40.190.10 159 310 1.6E-54 T 23-04-2016 VV93_RS05765 ab8025e258330f2983f739534167c203 543 SUPERFAMILY SSF53850 35 530 4.52E-150 T 23-04-2016 VV93_RS05765 ab8025e258330f2983f739534167c203 543 PANTHER PTHR30290 24 541 9.2E-203 T 23-04-2016 VV93_RS05765 ab8025e258330f2983f739534167c203 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 461 6.6E-95 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain VV93_RS05765 ab8025e258330f2983f739534167c203 543 PIRSF PIRSF002741 1 543 1.5E-117 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VV93_RS05765 ab8025e258330f2983f739534167c203 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 23-04-2016 IPR023765 Solute-binding protein family 5, conserved site VV93_RS05765 ab8025e258330f2983f739534167c203 543 Gene3D G3DSA:3.10.105.10 311 511 7.4E-66 T 23-04-2016 VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 PANTHER PTHR23406 1 562 0.0 T 23-04-2016 VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 PANTHER PTHR23406:SF25 1 562 0.0 T 23-04-2016 VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 Gene3D G3DSA:3.40.50.10380 14 265 3.3E-115 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 PRINTS PR00072 Malic enzyme signature 264 280 5.3E-72 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 PRINTS PR00072 Malic enzyme signature 144 173 5.3E-72 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 PRINTS PR00072 Malic enzyme signature 405 421 5.3E-72 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 PRINTS PR00072 Malic enzyme signature 239 257 5.3E-72 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 PRINTS PR00072 Malic enzyme signature 84 108 5.3E-72 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 PRINTS PR00072 Malic enzyme signature 295 311 5.3E-72 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 PRINTS PR00072 Malic enzyme signature 180 202 5.3E-72 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 SUPERFAMILY SSF51735 268 559 3.36E-95 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 SUPERFAMILY SSF53223 4 267 1.01E-109 T 23-04-2016 VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 SMART SM00919 268 528 5.6E-132 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 SMART SM01274 78 258 1.3E-107 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 9.8E-103 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 23-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 Gene3D G3DSA:3.40.50.720 266 559 3.4E-108 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 2.8E-78 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 73.372 T 23-04-2016 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 VV93_RS07025 b1fe28cb498b06b726c6f927f70895ae 562 PIRSF PIRSF000106 2 560 9.4E-225 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VV93_RS11460 1303e7ab0b5473cc7cb1f9ae6e1a7e4d 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 6.0E-93 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VV93_RS11460 1303e7ab0b5473cc7cb1f9ae6e1a7e4d 251 PANTHER PTHR10291 9 251 6.9E-127 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VV93_RS11460 1303e7ab0b5473cc7cb1f9ae6e1a7e4d 251 SUPERFAMILY SSF64005 8 233 1.44E-89 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VV93_RS11460 1303e7ab0b5473cc7cb1f9ae6e1a7e4d 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 5.4E-81 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VV93_RS11460 1303e7ab0b5473cc7cb1f9ae6e1a7e4d 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.595 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VV93_RS11460 1303e7ab0b5473cc7cb1f9ae6e1a7e4d 251 Gene3D G3DSA:3.40.1180.10 5 245 5.4E-100 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VV93_RS11460 1303e7ab0b5473cc7cb1f9ae6e1a7e4d 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 23-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 Gene3D G3DSA:3.40.50.300 279 339 1.5E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 Gene3D G3DSA:3.40.50.300 389 407 1.5E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 Gene3D G3DSA:3.40.50.300 7 89 1.5E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 SUPERFAMILY SSF52540 4 416 4.25E-138 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 SUPERFAMILY SSF52540 460 584 4.4E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 SUPERFAMILY SSF52540 37 82 4.4E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 SUPERFAMILY SSF46600 629 672 2.88E-11 T 23-04-2016 IPR001943 UVR domain GO:0005515 VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 Gene3D G3DSA:3.40.50.300 421 581 5.4E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 SMART SM00487 9 426 2.7E-27 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 Gene3D G3DSA:4.10.860.10 632 674 7.2E-18 T 23-04-2016 IPR001943 UVR domain GO:0005515 VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 43.127 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 Pfam PF02151 UvrB/uvrC motif 636 671 1.9E-8 T 23-04-2016 IPR001943 UVR domain GO:0005515 VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 PANTHER PTHR24029 1 674 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 Pfam PF12344 Ultra-violet resistance protein B 553 595 2.3E-20 T 23-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 Pfam PF04851 Type III restriction enzyme, res subunit 16 138 1.2E-8 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 Pfam PF00271 Helicase conserved C-terminal domain 436 546 7.8E-19 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 Gene3D G3DSA:3.30.2060.10 160 231 3.0E-10 T 23-04-2016 VV93_RS05720 a7ea47799b54b669d0bf84b934573db9 676 SMART SM00490 461 547 1.3E-19 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS02150 480d699968dbb75a5e5732500c592b15 241 PANTHER PTHR24220:SF497 5 238 3.4E-151 T 23-04-2016 VV93_RS02150 480d699968dbb75a5e5732500c592b15 241 SMART SM00382 28 202 2.8E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS02150 480d699968dbb75a5e5732500c592b15 241 PANTHER PTHR24220 5 238 3.4E-151 T 23-04-2016 VV93_RS02150 480d699968dbb75a5e5732500c592b15 241 SUPERFAMILY SSF52540 3 237 2.43E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02150 480d699968dbb75a5e5732500c592b15 241 Pfam PF00005 ABC transporter 20 166 5.4E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS02150 480d699968dbb75a5e5732500c592b15 241 Gene3D G3DSA:3.40.50.300 3 235 2.5E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02150 480d699968dbb75a5e5732500c592b15 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS02150 480d699968dbb75a5e5732500c592b15 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 3.4E-126 T 23-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 VV93_RS02150 480d699968dbb75a5e5732500c592b15 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 1.1E-9 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 854 5.1E-295 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 Pfam PF06827 Zinc finger found in FPG and IleRS 909 936 2.6E-6 T 23-04-2016 IPR010663 Zinc finger, FPG/IleRS-type VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 SUPERFAMILY SSF52374 408 652 2.21E-138 T 23-04-2016 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 SUPERFAMILY SSF52374 4 202 2.21E-138 T 23-04-2016 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 Gene3D G3DSA:3.40.50.620 408 641 2.0E-139 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 Gene3D G3DSA:3.40.50.620 17 205 2.0E-139 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 Pfam PF08264 Anticodon-binding domain of tRNA 690 850 3.0E-25 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 Gene3D G3DSA:3.90.740.10 207 394 5.8E-56 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 939 21.481 T 23-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 PANTHER PTHR11946:SF11 288 925 0.0 T 23-04-2016 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 PANTHER PTHR11946:SF11 237 262 0.0 T 23-04-2016 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 PANTHER PTHR11946:SF11 6 215 0.0 T 23-04-2016 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 SUPERFAMILY SSF50677 205 408 9.1E-55 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.27E-32 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.27E-32 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.27E-32 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.27E-32 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.27E-32 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 SUPERFAMILY SSF47323 657 939 1.07E-72 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 Gene3D G3DSA:1.10.730.10 646 837 4.5E-39 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 646 7.1E-230 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 PANTHER PTHR11946 288 925 0.0 T 23-04-2016 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 PANTHER PTHR11946 237 262 0.0 T 23-04-2016 VV93_RS03165 5da8f478ca0ffdc54be8de592e631b96 948 PANTHER PTHR11946 6 215 0.0 T 23-04-2016 VV93_RS02930 815c92830563a4c67cb8777725ed4c96 1487 SUPERFAMILY SSF56235 13 429 7.02E-150 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VV93_RS02930 815c92830563a4c67cb8777725ed4c96 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 4.7E-152 T 23-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VV93_RS02930 815c92830563a4c67cb8777725ed4c96 1487 SUPERFAMILY SSF51395 434 1191 1.71E-247 T 23-04-2016 VV93_RS02930 815c92830563a4c67cb8777725ed4c96 1487 Gene3D G3DSA:2.160.20.60 1211 1465 6.7E-96 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VV93_RS02930 815c92830563a4c67cb8777725ed4c96 1487 Pfam PF04898 Glutamate synthase central domain 458 738 1.3E-100 T 23-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 VV93_RS02930 815c92830563a4c67cb8777725ed4c96 1487 SUPERFAMILY SSF69336 1213 1465 6.8E-88 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VV93_RS02930 815c92830563a4c67cb8777725ed4c96 1487 Gene3D G3DSA:3.20.20.70 440 779 1.4E-96 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS02930 815c92830563a4c67cb8777725ed4c96 1487 PANTHER PTHR11938:SF1 2 1477 0.0 T 23-04-2016 VV93_RS02930 815c92830563a4c67cb8777725ed4c96 1487 PANTHER PTHR11938 2 1477 0.0 T 23-04-2016 VV93_RS02930 815c92830563a4c67cb8777725ed4c96 1487 Pfam PF01493 GXGXG motif 1236 1418 4.5E-73 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VV93_RS02930 815c92830563a4c67cb8777725ed4c96 1487 Gene3D G3DSA:3.60.20.10 13 435 3.6E-172 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VV93_RS02930 815c92830563a4c67cb8777725ed4c96 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 3.0E-177 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain VV93_RS02930 815c92830563a4c67cb8777725ed4c96 1487 Gene3D G3DSA:3.20.20.70 816 1190 3.9E-164 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS13050 55d996f6c1e9a61c06469f4b3a7db552 236 Gene3D G3DSA:3.20.20.10 1 234 1.5E-92 T 23-04-2016 IPR029066 PLP-binding barrel VV93_RS13050 55d996f6c1e9a61c06469f4b3a7db552 236 PANTHER PTHR10146 1 236 1.3E-107 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 VV93_RS13050 55d996f6c1e9a61c06469f4b3a7db552 236 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 VV93_RS13050 55d996f6c1e9a61c06469f4b3a7db552 236 Pfam PF01168 Alanine racemase, N-terminal domain 24 230 1.8E-31 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VV93_RS13050 55d996f6c1e9a61c06469f4b3a7db552 236 PIRSF PIRSF004848 1 236 5.5E-76 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 VV93_RS13050 55d996f6c1e9a61c06469f4b3a7db552 236 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 1.0E-87 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 VV93_RS13050 55d996f6c1e9a61c06469f4b3a7db552 236 SUPERFAMILY SSF51419 1 228 1.96E-81 T 23-04-2016 IPR029066 PLP-binding barrel VV93_RS07275 bf5a7f76329b952d23183d041b1640c2 386 SMART SM00471 183 334 1.4E-10 T 23-04-2016 IPR003607 HD/PDEase domain VV93_RS07275 bf5a7f76329b952d23183d041b1640c2 386 Gene3D G3DSA:3.30.450.40 8 159 5.3E-5 T 23-04-2016 IPR029016 GAF domain-like VV93_RS07275 bf5a7f76329b952d23183d041b1640c2 386 SUPERFAMILY SSF109604 178 365 3.14E-32 T 23-04-2016 VV93_RS07275 bf5a7f76329b952d23183d041b1640c2 386 Gene3D G3DSA:1.10.3210.10 178 362 1.4E-18 T 23-04-2016 IPR006674 HD domain VV93_RS07275 bf5a7f76329b952d23183d041b1640c2 386 Pfam PF01966 HD domain 189 324 2.7E-16 T 23-04-2016 IPR006674 HD domain VV93_RS06255 84361339b5b8d15a8be4c0eec922102b 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-18 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS06255 84361339b5b8d15a8be4c0eec922102b 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-18 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS06255 84361339b5b8d15a8be4c0eec922102b 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-18 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS06255 84361339b5b8d15a8be4c0eec922102b 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VV93_RS06255 84361339b5b8d15a8be4c0eec922102b 93 Pfam PF00216 Bacterial DNA-binding protein 1 91 8.8E-31 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS06255 84361339b5b8d15a8be4c0eec922102b 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 30.501 T 23-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VV93_RS06255 84361339b5b8d15a8be4c0eec922102b 93 Gene3D G3DSA:4.10.520.10 1 91 8.5E-35 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VV93_RS06255 84361339b5b8d15a8be4c0eec922102b 93 SMART SM00411 1 91 5.8E-43 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS06255 84361339b5b8d15a8be4c0eec922102b 93 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 4.3E-49 T 23-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VV93_RS06255 84361339b5b8d15a8be4c0eec922102b 93 PANTHER PTHR33175 1 92 6.2E-50 T 23-04-2016 VV93_RS06255 84361339b5b8d15a8be4c0eec922102b 93 PANTHER PTHR33175:SF5 1 92 6.2E-50 T 23-04-2016 VV93_RS06255 84361339b5b8d15a8be4c0eec922102b 93 SUPERFAMILY SSF47729 1 91 4.12E-30 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VV93_RS10895 e88e2b0991173370460473f0e14bc4e3 247 PANTHER PTHR30071 1 224 4.3E-87 T 23-04-2016 VV93_RS10895 e88e2b0991173370460473f0e14bc4e3 247 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 5.1E-85 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10895 e88e2b0991173370460473f0e14bc4e3 247 Pfam PF01578 Cytochrome C assembly protein 16 184 1.1E-31 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VV93_RS10895 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 2.6E-65 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10895 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 2.6E-65 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10895 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 2.6E-65 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10895 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 2.6E-65 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10895 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 2.6E-65 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10895 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 2.6E-65 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS05545 af44f091afbed509029aa8e56d5ef516 304 SUPERFAMILY SSF52172 5 144 6.69E-42 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS05545 af44f091afbed509029aa8e56d5ef516 304 Pfam PF00072 Response regulator receiver domain 10 121 3.3E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS05545 af44f091afbed509029aa8e56d5ef516 304 SMART SM00267 134 296 3.2E-49 T 23-04-2016 IPR000160 GGDEF domain VV93_RS05545 af44f091afbed509029aa8e56d5ef516 304 Pfam PF00990 Diguanylate cyclase, GGDEF domain 145 292 1.4E-36 T 23-04-2016 IPR000160 GGDEF domain VV93_RS05545 af44f091afbed509029aa8e56d5ef516 304 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 141 295 1.5E-38 T 23-04-2016 IPR000160 GGDEF domain VV93_RS05545 af44f091afbed509029aa8e56d5ef516 304 SMART SM00448 8 121 5.5E-40 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS05545 af44f091afbed509029aa8e56d5ef516 304 PANTHER PTHR26402:SF495 8 124 2.8E-56 T 23-04-2016 VV93_RS05545 af44f091afbed509029aa8e56d5ef516 304 PANTHER PTHR26402 8 124 2.8E-56 T 23-04-2016 VV93_RS05545 af44f091afbed509029aa8e56d5ef516 304 SUPERFAMILY SSF55073 150 294 2.59E-40 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS05545 af44f091afbed509029aa8e56d5ef516 304 Gene3D G3DSA:3.40.50.2300 4 133 8.7E-42 T 23-04-2016 VV93_RS05545 af44f091afbed509029aa8e56d5ef516 304 Gene3D G3DSA:3.30.70.270 147 298 1.7E-44 T 23-04-2016 VV93_RS11430 d57a706948373c45fdff4352a97288ae 343 SUPERFAMILY SSF51161 32 316 9.89E-84 T 23-04-2016 IPR011004 Trimeric LpxA-like VV93_RS11430 d57a706948373c45fdff4352a97288ae 343 PANTHER PTHR22572 100 295 2.8E-54 T 23-04-2016 VV93_RS11430 d57a706948373c45fdff4352a97288ae 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 1.2E-9 T 23-04-2016 IPR001451 Hexapeptide repeat VV93_RS11430 d57a706948373c45fdff4352a97288ae 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 257 0.0028 T 23-04-2016 IPR001451 Hexapeptide repeat VV93_RS11430 d57a706948373c45fdff4352a97288ae 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 1.9E-9 T 23-04-2016 IPR001451 Hexapeptide repeat VV93_RS11430 d57a706948373c45fdff4352a97288ae 343 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VV93_RS11430 d57a706948373c45fdff4352a97288ae 343 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 106 134 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VV93_RS11430 d57a706948373c45fdff4352a97288ae 343 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 100 128 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VV93_RS11430 d57a706948373c45fdff4352a97288ae 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 4.1E-116 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 VV93_RS11430 d57a706948373c45fdff4352a97288ae 343 Gene3D G3DSA:2.160.10.10 100 138 1.9E-11 T 23-04-2016 VV93_RS11430 d57a706948373c45fdff4352a97288ae 343 Gene3D G3DSA:2.160.10.10 139 301 1.2E-39 T 23-04-2016 VV93_RS11430 d57a706948373c45fdff4352a97288ae 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 35.223 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 VV93_RS11430 d57a706948373c45fdff4352a97288ae 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 88 4.5E-22 T 23-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 VV93_RS13435 e2150c7486900c8ecb259a1f274dca17 320 PANTHER PTHR10996 1 320 6.0E-102 T 23-04-2016 VV93_RS13435 e2150c7486900c8ecb259a1f274dca17 320 Gene3D G3DSA:3.40.50.720 111 289 1.5E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS13435 e2150c7486900c8ecb259a1f274dca17 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VV93_RS13435 e2150c7486900c8ecb259a1f274dca17 320 Gene3D G3DSA:3.40.50.720 24 110 2.1E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS13435 e2150c7486900c8ecb259a1f274dca17 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 3.2E-56 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VV93_RS13435 e2150c7486900c8ecb259a1f274dca17 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 32 320 8.2E-25 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 VV93_RS13435 e2150c7486900c8ecb259a1f274dca17 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VV93_RS13435 e2150c7486900c8ecb259a1f274dca17 320 SUPERFAMILY SSF51735 103 290 3.26E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS13435 e2150c7486900c8ecb259a1f274dca17 320 SUPERFAMILY SSF52283 4 139 2.08E-32 T 23-04-2016 VV93_RS00545 7cb944d5691c78f67aecc6e10398e1f4 197 PANTHER PTHR33508 1 193 1.4E-82 T 23-04-2016 VV93_RS00545 7cb944d5691c78f67aecc6e10398e1f4 197 Pfam PF01914 MarC family integral membrane protein 3 192 1.3E-54 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VV93_RS00545 7cb944d5691c78f67aecc6e10398e1f4 197 PANTHER PTHR33508:SF4 1 193 1.4E-82 T 23-04-2016 VV93_RS00545 7cb944d5691c78f67aecc6e10398e1f4 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 189 1.4E-30 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VV93_RS01050 80b1aaa526ea4140fc26196153cc6f47 309 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 35 309 6.2E-81 T 23-04-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VV93_RS01050 80b1aaa526ea4140fc26196153cc6f47 309 SUPERFAMILY SSF50156 213 308 3.06E-17 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS01050 80b1aaa526ea4140fc26196153cc6f47 309 Pfam PF11356 Type II secretion system protein C 37 178 2.4E-41 T 23-04-2016 IPR024961 Type II secretion system protein C, N-terminal VV93_RS01050 80b1aaa526ea4140fc26196153cc6f47 309 Gene3D G3DSA:2.30.42.10 244 306 3.3E-6 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS07635 ba5607f6888d8386d27338a747a5517a 477 Pfam PF13807 G-rich domain on putative tyrosine kinase 362 442 1.3E-6 T 23-04-2016 IPR032807 Tyrosine kinase, G-rich domain VV93_RS07635 ba5607f6888d8386d27338a747a5517a 477 PANTHER PTHR32309 325 473 7.5E-33 T 23-04-2016 VV93_RS07635 ba5607f6888d8386d27338a747a5517a 477 PANTHER PTHR32309 6 297 7.5E-33 T 23-04-2016 VV93_RS07635 ba5607f6888d8386d27338a747a5517a 477 PANTHER PTHR32309:SF13 325 473 7.5E-33 T 23-04-2016 VV93_RS07635 ba5607f6888d8386d27338a747a5517a 477 PANTHER PTHR32309:SF13 6 297 7.5E-33 T 23-04-2016 VV93_RS07635 ba5607f6888d8386d27338a747a5517a 477 Pfam PF02706 Chain length determinant protein 8 148 3.9E-9 T 23-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.1E-28 T 23-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 23-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 PANTHER PTHR20856 1181 1342 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 PANTHER PTHR20856 5 231 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 PANTHER PTHR20856 1034 1128 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 PANTHER PTHR20856 340 725 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 PANTHER PTHR20856 743 930 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.7E-27 T 23-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.293 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 1.6E-156 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 337 454 7.2E-17 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 231 1.0E-7 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 PANTHER PTHR20856:SF20 1181 1342 0.0 T 23-04-2016 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 PANTHER PTHR20856:SF20 5 231 0.0 T 23-04-2016 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 PANTHER PTHR20856:SF20 1034 1128 0.0 T 23-04-2016 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 PANTHER PTHR20856:SF20 340 725 0.0 T 23-04-2016 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 PANTHER PTHR20856:SF20 743 930 0.0 T 23-04-2016 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.5E-24 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:3.90.1110.10 346 444 2.2E-65 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:3.90.1110.10 153 230 2.2E-65 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:2.30.150.10 592 656 4.9E-29 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:2.40.270.10 1060 1241 4.8E-85 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:2.40.270.10 793 820 4.8E-85 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:3.90.1100.10 20 151 1.0E-145 T 23-04-2016 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:3.90.1100.10 445 591 1.0E-145 T 23-04-2016 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:3.90.1100.10 659 713 1.0E-145 T 23-04-2016 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.1E-57 T 23-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:2.40.50.150 1045 1059 1.7E-57 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:2.40.50.150 828 937 1.7E-57 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:2.40.50.100 716 792 4.0E-29 T 23-04-2016 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 SUPERFAMILY SSF64484 343 939 0.0 T 23-04-2016 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 SUPERFAMILY SSF64484 11 226 0.0 T 23-04-2016 VV93_RS14655 111e1288efd48ea109d8c6095f811346 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 23-04-2016 VV93_RS10960 e652d5e6410a5d8debac64bdc730c59c 497 PANTHER PTHR11564 192 474 1.0E-94 T 23-04-2016 VV93_RS10960 e652d5e6410a5d8debac64bdc730c59c 497 SMART SM00382 283 450 2.2E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS10960 e652d5e6410a5d8debac64bdc730c59c 497 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 91 372 3.8E-70 T 23-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 VV93_RS10960 e652d5e6410a5d8debac64bdc730c59c 497 SUPERFAMILY SSF52540 280 472 1.02E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10960 e652d5e6410a5d8debac64bdc730c59c 497 Gene3D G3DSA:3.40.50.300 283 473 1.4E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10960 e652d5e6410a5d8debac64bdc730c59c 497 PANTHER PTHR11564:SF3 192 474 1.0E-94 T 23-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 VV93_RS10960 e652d5e6410a5d8debac64bdc730c59c 497 SMART SM00962 284 477 1.8E-65 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VV93_RS10960 e652d5e6410a5d8debac64bdc730c59c 497 Pfam PF00448 SRP54-type protein, GTPase domain 286 474 5.4E-39 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VV93_RS06305 e225cddd26ad49caedde240d7b3198ad 1214 SUPERFAMILY SSF55486 294 409 3.42E-17 T 23-04-2016 VV93_RS06305 e225cddd26ad49caedde240d7b3198ad 1214 SUPERFAMILY SSF55486 591 670 3.42E-17 T 23-04-2016 VV93_RS06305 e225cddd26ad49caedde240d7b3198ad 1214 Gene3D G3DSA:3.40.390.10 594 666 6.3E-6 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 VV93_RS06305 e225cddd26ad49caedde240d7b3198ad 1214 Pfam PF16313 Met-zincin 601 721 9.5E-9 T 23-04-2016 IPR032534 Domian of unknown function DUF4953 VV93_RS09265 7fc81630b065229d1b89458f12c20d10 305 PANTHER PTHR30118:SF12 1 305 7.4E-133 T 23-04-2016 VV93_RS09265 7fc81630b065229d1b89458f12c20d10 305 Gene3D G3DSA:3.40.190.10 184 272 6.1E-19 T 23-04-2016 VV93_RS09265 7fc81630b065229d1b89458f12c20d10 305 Gene3D G3DSA:1.10.10.10 4 88 1.2E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS09265 7fc81630b065229d1b89458f12c20d10 305 PANTHER PTHR30118 1 305 7.4E-133 T 23-04-2016 VV93_RS09265 7fc81630b065229d1b89458f12c20d10 305 SUPERFAMILY SSF53850 92 301 4.75E-30 T 23-04-2016 VV93_RS09265 7fc81630b065229d1b89458f12c20d10 305 Gene3D G3DSA:3.40.190.10 290 302 1.2E-9 T 23-04-2016 VV93_RS09265 7fc81630b065229d1b89458f12c20d10 305 Gene3D G3DSA:3.40.190.10 92 183 1.2E-9 T 23-04-2016 VV93_RS09265 7fc81630b065229d1b89458f12c20d10 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 3.1E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS09265 7fc81630b065229d1b89458f12c20d10 305 Pfam PF03466 LysR substrate binding domain 98 300 3.1E-14 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS09265 7fc81630b065229d1b89458f12c20d10 305 SUPERFAMILY SSF46785 6 87 2.92E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS13640 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS00140 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS05940 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS03885 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS10145 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS13180 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS14765 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS02105 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS09450 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS09160 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS08815 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS06745 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS00875 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS09035 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS12040 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS13660 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS05530 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS02415 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS06845 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS08580 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS14585 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS11795 f6873ae785e0d14379e632c62fa95673 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 23-04-2016 VV93_RS07310 21bcd649857e5fff82b0709fb10b8f9c 800 SUPERFAMILY SSF49452 710 767 1.61E-5 T 23-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 VV93_RS07310 21bcd649857e5fff82b0709fb10b8f9c 800 Gene3D G3DSA:2.60.40.1120 714 767 4.5E-4 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain VV93_RS07310 21bcd649857e5fff82b0709fb10b8f9c 800 PANTHER PTHR30451:SF5 90 428 5.4E-21 T 23-04-2016 VV93_RS07310 21bcd649857e5fff82b0709fb10b8f9c 800 PANTHER PTHR30451 90 428 5.4E-21 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 VV93_RS07310 21bcd649857e5fff82b0709fb10b8f9c 800 Pfam PF00577 Outer membrane usher protein 256 607 1.9E-5 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 VV93_RS05850 456abf2c967c2d57219560ec07990b81 521 SUPERFAMILY SSF56322 14 516 7.33E-158 T 23-04-2016 IPR005801 ADC synthase GO:0009058 VV93_RS05850 456abf2c967c2d57219560ec07990b81 521 PIRSF PIRSF001373 3 521 2.5E-260 T 23-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VV93_RS05850 456abf2c967c2d57219560ec07990b81 521 Pfam PF00425 chorismate binding enzyme 246 506 2.0E-84 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal VV93_RS05850 456abf2c967c2d57219560ec07990b81 521 PANTHER PTHR11236 13 520 1.2E-250 T 23-04-2016 VV93_RS05850 456abf2c967c2d57219560ec07990b81 521 PANTHER PTHR11236:SF22 13 520 1.2E-250 T 23-04-2016 VV93_RS05850 456abf2c967c2d57219560ec07990b81 521 PRINTS PR00095 Anthranilate synthase component I signature 448 462 6.1E-23 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VV93_RS05850 456abf2c967c2d57219560ec07990b81 521 PRINTS PR00095 Anthranilate synthase component I signature 368 381 6.1E-23 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VV93_RS05850 456abf2c967c2d57219560ec07990b81 521 PRINTS PR00095 Anthranilate synthase component I signature 354 367 6.1E-23 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VV93_RS05850 456abf2c967c2d57219560ec07990b81 521 PRINTS PR00095 Anthranilate synthase component I signature 463 477 6.1E-23 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VV93_RS05850 456abf2c967c2d57219560ec07990b81 521 Gene3D G3DSA:3.60.120.10 15 519 4.6E-160 T 23-04-2016 IPR005801 ADC synthase GO:0009058 VV93_RS05850 456abf2c967c2d57219560ec07990b81 521 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 518 1.1E-227 T 23-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VV93_RS05850 456abf2c967c2d57219560ec07990b81 521 Pfam PF04715 Anthranilate synthase component I, N terminal region 25 198 1.4E-12 T 23-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VV93_RS07580 b5e1988d3e56626360df11087da743e1 500 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 487 84.376 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VV93_RS07580 b5e1988d3e56626360df11087da743e1 500 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 191 3.6E-63 T 23-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VV93_RS07580 b5e1988d3e56626360df11087da743e1 500 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 193 486 1.7E-114 T 23-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VV93_RS07580 b5e1988d3e56626360df11087da743e1 500 Gene3D G3DSA:3.40.50.720 5 190 1.2E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS07580 b5e1988d3e56626360df11087da743e1 500 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 486 2.4E-202 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VV93_RS07580 b5e1988d3e56626360df11087da743e1 500 SUPERFAMILY SSF51735 4 194 2.89E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS07580 b5e1988d3e56626360df11087da743e1 500 PANTHER PTHR23429 5 495 7.6E-234 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VV93_RS07580 b5e1988d3e56626360df11087da743e1 500 PIRSF PIRSF000110 3 489 1.6E-176 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VV93_RS07580 b5e1988d3e56626360df11087da743e1 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 171 199 3.3E-49 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VV93_RS07580 b5e1988d3e56626360df11087da743e1 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 223 240 3.3E-49 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VV93_RS07580 b5e1988d3e56626360df11087da743e1 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 241 257 3.3E-49 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VV93_RS07580 b5e1988d3e56626360df11087da743e1 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 332 358 3.3E-49 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VV93_RS07580 b5e1988d3e56626360df11087da743e1 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 147 160 3.3E-49 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VV93_RS07580 b5e1988d3e56626360df11087da743e1 500 SUPERFAMILY SSF55347 181 489 4.58E-113 T 23-04-2016 VV93_RS07580 b5e1988d3e56626360df11087da743e1 500 Gene3D G3DSA:3.30.360.10 191 486 2.0E-120 T 23-04-2016 VV93_RS07580 b5e1988d3e56626360df11087da743e1 500 PANTHER PTHR23429:SF0 5 495 7.6E-234 T 23-04-2016 VV93_RS07580 b5e1988d3e56626360df11087da743e1 500 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 181 187 - T 23-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VV93_RS04650 d81f0ba3296863963e37c68e6253d0f6 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 23-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VV93_RS04650 d81f0ba3296863963e37c68e6253d0f6 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 6.5E-18 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like VV93_RS04650 d81f0ba3296863963e37c68e6253d0f6 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 6.5E-18 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like VV93_RS04650 d81f0ba3296863963e37c68e6253d0f6 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 6.5E-18 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like VV93_RS04650 d81f0ba3296863963e37c68e6253d0f6 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 23-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VV93_RS04650 d81f0ba3296863963e37c68e6253d0f6 85 Gene3D G3DSA:3.30.1340.10 1 83 5.5E-32 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like VV93_RS04650 d81f0ba3296863963e37c68e6253d0f6 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.5E-27 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like VV93_RS04650 d81f0ba3296863963e37c68e6253d0f6 85 SUPERFAMILY SSF55594 1 82 1.57E-26 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like VV93_RS04650 d81f0ba3296863963e37c68e6253d0f6 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.8E-26 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like VV93_RS04650 d81f0ba3296863963e37c68e6253d0f6 85 PANTHER PTHR33705:SF1 1 84 1.8E-36 T 23-04-2016 VV93_RS04650 d81f0ba3296863963e37c68e6253d0f6 85 PANTHER PTHR33705 1 84 1.8E-36 T 23-04-2016 VV93_RS11265 8f78c0b66405cb370ce3d3f09630baec 484 SMART SM00028 307 340 56.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS11265 8f78c0b66405cb370ce3d3f09630baec 484 SMART SM00028 341 374 15.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS11265 8f78c0b66405cb370ce3d3f09630baec 484 SMART SM00028 426 459 12.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS11265 8f78c0b66405cb370ce3d3f09630baec 484 Gene3D G3DSA:3.30.2010.10 64 147 5.4E-18 T 23-04-2016 VV93_RS11265 8f78c0b66405cb370ce3d3f09630baec 484 Pfam PF14559 Tetratricopeptide repeat 352 416 1.8E-10 T 23-04-2016 VV93_RS11265 8f78c0b66405cb370ce3d3f09630baec 484 Gene3D G3DSA:1.25.40.10 308 456 1.6E-22 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS11265 8f78c0b66405cb370ce3d3f09630baec 484 Pfam PF01435 Peptidase family M48 70 252 5.0E-28 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VV93_RS11265 8f78c0b66405cb370ce3d3f09630baec 484 PANTHER PTHR22726:SF10 8 349 1.4E-122 T 23-04-2016 VV93_RS11265 8f78c0b66405cb370ce3d3f09630baec 484 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 481 33.028 T 23-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 VV93_RS11265 8f78c0b66405cb370ce3d3f09630baec 484 PANTHER PTHR22726 8 349 1.4E-122 T 23-04-2016 VV93_RS11265 8f78c0b66405cb370ce3d3f09630baec 484 SUPERFAMILY SSF48452 311 455 4.09E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS00995 8a51775a76da460e6116335bcbdf97da 469 SUPERFAMILY SSF55931 102 468 5.4E-140 T 23-04-2016 VV93_RS00995 8a51775a76da460e6116335bcbdf97da 469 Gene3D G3DSA:3.30.590.10 106 455 1.6E-142 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 VV93_RS00995 8a51775a76da460e6116335bcbdf97da 469 SMART SM01230 102 379 1.7E-155 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VV93_RS00995 8a51775a76da460e6116335bcbdf97da 469 PANTHER PTHR20852:SF15 161 469 1.5E-273 T 23-04-2016 VV93_RS00995 8a51775a76da460e6116335bcbdf97da 469 PANTHER PTHR20852:SF15 1 138 1.5E-273 T 23-04-2016 VV93_RS00995 8a51775a76da460e6116335bcbdf97da 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 23-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VV93_RS00995 8a51775a76da460e6116335bcbdf97da 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 23-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VV93_RS00995 8a51775a76da460e6116335bcbdf97da 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 23-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VV93_RS00995 8a51775a76da460e6116335bcbdf97da 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 2.1E-213 T 23-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VV93_RS00995 8a51775a76da460e6116335bcbdf97da 469 SUPERFAMILY SSF54368 3 100 1.26E-35 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VV93_RS00995 8a51775a76da460e6116335bcbdf97da 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 6.2E-141 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VV93_RS00995 8a51775a76da460e6116335bcbdf97da 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.4E-30 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VV93_RS00995 8a51775a76da460e6116335bcbdf97da 469 PANTHER PTHR20852 161 469 1.5E-273 T 23-04-2016 VV93_RS00995 8a51775a76da460e6116335bcbdf97da 469 PANTHER PTHR20852 1 138 1.5E-273 T 23-04-2016 VV93_RS00995 8a51775a76da460e6116335bcbdf97da 469 Gene3D G3DSA:3.10.20.70 3 105 3.9E-39 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VV93_RS06835 474450defbd3f08bac70ed40eb1b5e07 577 SMART SM00490 258 341 2.2E-11 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS06835 474450defbd3f08bac70ed40eb1b5e07 577 PANTHER PTHR24031 1 159 2.9E-155 T 23-04-2016 VV93_RS06835 474450defbd3f08bac70ed40eb1b5e07 577 PANTHER PTHR24031 440 571 2.9E-155 T 23-04-2016 VV93_RS06835 474450defbd3f08bac70ed40eb1b5e07 577 PANTHER PTHR24031 225 363 2.9E-155 T 23-04-2016 VV93_RS06835 474450defbd3f08bac70ed40eb1b5e07 577 Pfam PF04851 Type III restriction enzyme, res subunit 1 151 1.1E-22 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VV93_RS06835 474450defbd3f08bac70ed40eb1b5e07 577 PANTHER PTHR24031 183 193 2.9E-155 T 23-04-2016 VV93_RS06835 474450defbd3f08bac70ed40eb1b5e07 577 Gene3D G3DSA:3.40.50.300 2 151 5.9E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06835 474450defbd3f08bac70ed40eb1b5e07 577 Gene3D G3DSA:3.40.50.300 233 361 1.4E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06835 474450defbd3f08bac70ed40eb1b5e07 577 Pfam PF00271 Helicase conserved C-terminal domain 236 340 1.9E-13 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS06835 474450defbd3f08bac70ed40eb1b5e07 577 PANTHER PTHR24031:SF319 183 193 2.9E-155 T 23-04-2016 VV93_RS06835 474450defbd3f08bac70ed40eb1b5e07 577 SUPERFAMILY SSF57829 421 462 2.2E-6 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 VV93_RS06835 474450defbd3f08bac70ed40eb1b5e07 577 PANTHER PTHR24031:SF319 225 363 2.9E-155 T 23-04-2016 VV93_RS06835 474450defbd3f08bac70ed40eb1b5e07 577 PANTHER PTHR24031:SF319 1 159 2.9E-155 T 23-04-2016 VV93_RS06835 474450defbd3f08bac70ed40eb1b5e07 577 PANTHER PTHR24031:SF319 440 571 2.9E-155 T 23-04-2016 VV93_RS06835 474450defbd3f08bac70ed40eb1b5e07 577 SUPERFAMILY SSF52540 45 169 1.02E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06835 474450defbd3f08bac70ed40eb1b5e07 577 SUPERFAMILY SSF52540 233 357 1.02E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06835 474450defbd3f08bac70ed40eb1b5e07 577 SMART SM00487 1 174 2.8E-11 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV93_RS03625 a0f462c0c99c11958aea8d1a53f98640 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 40.646 T 23-04-2016 IPR017687 Outer membrane protein assembly factor BamB VV93_RS03625 a0f462c0c99c11958aea8d1a53f98640 386 Gene3D G3DSA:2.140.10.10 1 377 1.9E-72 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain VV93_RS03625 a0f462c0c99c11958aea8d1a53f98640 386 PANTHER PTHR32303:SF8 1 362 8.1E-151 T 23-04-2016 VV93_RS03625 a0f462c0c99c11958aea8d1a53f98640 386 SUPERFAMILY SSF50998 31 374 1.88E-81 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VV93_RS03625 a0f462c0c99c11958aea8d1a53f98640 386 Pfam PF13360 PQQ-like domain 76 311 2.7E-53 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat VV93_RS03625 a0f462c0c99c11958aea8d1a53f98640 386 PANTHER PTHR32303 1 362 8.1E-151 T 23-04-2016 VV93_RS03625 a0f462c0c99c11958aea8d1a53f98640 386 SMART SM00564 107 138 0.011 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VV93_RS03625 a0f462c0c99c11958aea8d1a53f98640 386 SMART SM00564 192 223 130.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VV93_RS03625 a0f462c0c99c11958aea8d1a53f98640 386 SMART SM00564 322 353 1.2 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VV93_RS03625 a0f462c0c99c11958aea8d1a53f98640 386 SMART SM00564 243 274 0.022 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VV93_RS03625 a0f462c0c99c11958aea8d1a53f98640 386 SMART SM00564 63 94 0.004 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VV93_RS03625 a0f462c0c99c11958aea8d1a53f98640 386 SMART SM00564 146 178 5.2E-4 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VV93_RS03625 a0f462c0c99c11958aea8d1a53f98640 386 SMART SM00564 280 312 27.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VV93_RS03625 a0f462c0c99c11958aea8d1a53f98640 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 382 9.2E-140 T 23-04-2016 IPR017687 Outer membrane protein assembly factor BamB VV93_RS10290 74516f44e3fec93b3e347ebe97d83173 73 PIRSF PIRSF002599 1 73 2.6E-23 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 VV93_RS10290 74516f44e3fec93b3e347ebe97d83173 73 SUPERFAMILY SSF50249 1 67 7.28E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS10290 74516f44e3fec93b3e347ebe97d83173 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.8E-28 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV93_RS10290 74516f44e3fec93b3e347ebe97d83173 73 PRINTS PR00050 Cold shock protein signature 40 58 1.4E-14 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV93_RS10290 74516f44e3fec93b3e347ebe97d83173 73 PRINTS PR00050 Cold shock protein signature 4 19 1.4E-14 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV93_RS10290 74516f44e3fec93b3e347ebe97d83173 73 PRINTS PR00050 Cold shock protein signature 25 34 1.4E-14 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV93_RS10290 74516f44e3fec93b3e347ebe97d83173 73 PANTHER PTHR11544 1 73 4.8E-40 T 23-04-2016 VV93_RS10290 74516f44e3fec93b3e347ebe97d83173 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 1.3E-40 T 23-04-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 VV93_RS10290 74516f44e3fec93b3e347ebe97d83173 73 Gene3D G3DSA:2.40.50.140 1 65 1.1E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS10290 74516f44e3fec93b3e347ebe97d83173 73 PANTHER PTHR11544:SF52 1 73 4.8E-40 T 23-04-2016 VV93_RS10290 74516f44e3fec93b3e347ebe97d83173 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 23-04-2016 IPR019844 Cold-shock conserved site VV93_RS10290 74516f44e3fec93b3e347ebe97d83173 73 SMART SM00357 3 67 1.3E-24 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 VV93_RS01025 948b78350db72dec2c4af9728548af9a 308 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 297 3.2E-44 T 23-04-2016 IPR012660 Thioesterase, putative VV93_RS01025 948b78350db72dec2c4af9728548af9a 308 SUPERFAMILY SSF55729 2 148 5.23E-30 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS01025 948b78350db72dec2c4af9728548af9a 308 PANTHER PTHR13355 4 160 2.6E-72 T 23-04-2016 VV93_RS01025 948b78350db72dec2c4af9728548af9a 308 Pfam PF00583 Acetyltransferase (GNAT) family 53 123 3.2E-11 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS01025 948b78350db72dec2c4af9728548af9a 308 Gene3D G3DSA:3.10.129.10 145 297 1.2E-63 T 23-04-2016 IPR029069 HotDog domain VV93_RS01025 948b78350db72dec2c4af9728548af9a 308 Gene3D G3DSA:3.40.630.30 5 144 1.1E-25 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS01025 948b78350db72dec2c4af9728548af9a 308 SUPERFAMILY SSF54637 154 296 7.07E-40 T 23-04-2016 IPR029069 HotDog domain VV93_RS01025 948b78350db72dec2c4af9728548af9a 308 PANTHER PTHR13355:SF8 4 160 2.6E-72 T 23-04-2016 VV93_RS01025 948b78350db72dec2c4af9728548af9a 308 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 2.1E-52 T 23-04-2016 IPR012660 Thioesterase, putative VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 Gene3D G3DSA:3.40.50.80 472 615 2.7E-61 T 23-04-2016 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 SUPERFAMILY SSF63380 247 462 1.88E-60 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 PRINTS PR00369 Flavodoxin signature 185 204 6.7E-11 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 PRINTS PR00369 Flavodoxin signature 129 140 6.7E-11 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 PRINTS PR00369 Flavodoxin signature 81 94 6.7E-11 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 PRINTS PR00369 Flavodoxin signature 161 171 6.7E-11 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 21 616 3.9E-254 T 23-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 Pfam PF00258 Flavodoxin 82 206 4.2E-28 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 Pfam PF00175 Oxidoreductase NAD-binding domain 474 580 7.6E-19 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 PANTHER PTHR19384:SF76 79 616 7.0E-204 T 23-04-2016 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 Gene3D G3DSA:1.20.990.10 298 400 5.2E-32 T 23-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 Gene3D G3DSA:3.40.50.360 72 225 6.9E-47 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 SUPERFAMILY SSF52218 79 226 1.56E-46 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 PIRSF PIRSF000207 13 616 6.7E-269 T 23-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 PANTHER PTHR19384 79 616 7.0E-204 T 23-04-2016 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 287 297 2.5E-27 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 403 410 2.5E-27 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 511 522 2.5E-27 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 542 558 2.5E-27 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 473 492 2.5E-27 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 498 507 2.5E-27 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 565 573 2.5E-27 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 SUPERFAMILY SSF52343 461 616 7.07E-52 T 23-04-2016 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 Gene3D G3DSA:2.40.30.10 401 471 7.9E-39 T 23-04-2016 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 Gene3D G3DSA:2.40.30.10 247 297 7.9E-39 T 23-04-2016 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 Pfam PF00667 FAD binding domain 250 441 1.2E-27 T 23-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 VV93_RS13700 44f1761d1f258e52e074305fdc5b8158 616 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 13 616 49.958 T 23-04-2016 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 3.8E-286 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 PANTHER PTHR19375 2 635 0.0 T 23-04-2016 VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 PANTHER PTHR19375:SF173 2 635 0.0 T 23-04-2016 VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 Gene3D G3DSA:3.30.420.40 195 228 3.9E-32 T 23-04-2016 VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 Gene3D G3DSA:3.30.420.40 318 360 3.9E-32 T 23-04-2016 VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 Gene3D G3DSA:3.30.420.40 118 194 7.1E-65 T 23-04-2016 VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 Gene3D G3DSA:3.30.420.40 4 52 7.1E-65 T 23-04-2016 VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 SUPERFAMILY SSF53067 186 381 9.72E-66 T 23-04-2016 VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 Pfam PF00012 Hsp70 protein 4 601 1.0E-263 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 SUPERFAMILY SSF53067 1 182 2.49E-66 T 23-04-2016 VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 Gene3D G3DSA:3.30.30.30 53 106 6.3E-29 T 23-04-2016 VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 Gene3D G3DSA:1.20.1270.10 531 600 6.1E-25 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 Gene3D G3DSA:2.60.34.10 389 530 3.1E-70 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 SUPERFAMILY SSF100934 534 607 3.88E-6 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 SUPERFAMILY SSF100920 383 539 4.71E-60 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 468 484 7.3E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 364 384 7.3E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 387 406 7.3E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 3 16 7.3E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 197 207 7.3E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 137 157 7.3E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 31 43 7.3E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 53 61 7.3E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 333 349 7.3E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 631 36.362 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 Gene3D G3DSA:3.90.640.10 229 314 8.0E-32 T 23-04-2016 VV93_RS03920 db9f022f21899a17e8c4f2470e501071 636 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site VV93_RS02935 e43decdb6b913e4fcb9aa0bd3e3529c1 489 Gene3D G3DSA:3.50.50.60 396 476 8.1E-18 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS02935 e43decdb6b913e4fcb9aa0bd3e3529c1 489 SUPERFAMILY SSF46548 2 155 4.18E-36 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VV93_RS02935 e43decdb6b913e4fcb9aa0bd3e3529c1 489 Gene3D G3DSA:3.50.50.60 243 395 3.8E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS02935 e43decdb6b913e4fcb9aa0bd3e3529c1 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 145 459 4.2E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS02935 e43decdb6b913e4fcb9aa0bd3e3529c1 489 Gene3D G3DSA:3.50.50.60 146 242 6.9E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS02935 e43decdb6b913e4fcb9aa0bd3e3529c1 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 1.1E-198 T 23-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 VV93_RS02935 e43decdb6b913e4fcb9aa0bd3e3529c1 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 2.3E-24 T 23-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II VV93_RS02935 e43decdb6b913e4fcb9aa0bd3e3529c1 489 PANTHER PTHR11938:SF75 43 319 1.5E-149 T 23-04-2016 VV93_RS02935 e43decdb6b913e4fcb9aa0bd3e3529c1 489 PANTHER PTHR11938:SF75 335 473 1.5E-149 T 23-04-2016 VV93_RS02935 e43decdb6b913e4fcb9aa0bd3e3529c1 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 1.1E-23 T 23-04-2016 VV93_RS02935 e43decdb6b913e4fcb9aa0bd3e3529c1 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 1.1E-23 T 23-04-2016 VV93_RS02935 e43decdb6b913e4fcb9aa0bd3e3529c1 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 1.1E-23 T 23-04-2016 VV93_RS02935 e43decdb6b913e4fcb9aa0bd3e3529c1 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 1.1E-23 T 23-04-2016 VV93_RS02935 e43decdb6b913e4fcb9aa0bd3e3529c1 489 SUPERFAMILY SSF51971 143 407 1.88E-66 T 23-04-2016 VV93_RS02935 e43decdb6b913e4fcb9aa0bd3e3529c1 489 PANTHER PTHR11938 43 319 1.5E-149 T 23-04-2016 VV93_RS02935 e43decdb6b913e4fcb9aa0bd3e3529c1 489 PANTHER PTHR11938 335 473 1.5E-149 T 23-04-2016 VV93_RS02935 e43decdb6b913e4fcb9aa0bd3e3529c1 489 Gene3D G3DSA:1.10.1060.10 3 145 3.3E-39 T 23-04-2016 VV93_RS10200 78df51bc9b3be91a2a08e1e8a45ec005 214 PANTHER PTHR34227 1 212 4.1E-71 T 23-04-2016 VV93_RS10200 78df51bc9b3be91a2a08e1e8a45ec005 214 SUPERFAMILY SSF89155 8 212 6.02E-51 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VV93_RS10200 78df51bc9b3be91a2a08e1e8a45ec005 214 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 34.236 T 23-04-2016 IPR023069 Chaperone TorD VV93_RS10200 78df51bc9b3be91a2a08e1e8a45ec005 214 PANTHER PTHR34227:SF1 1 212 4.1E-71 T 23-04-2016 VV93_RS10200 78df51bc9b3be91a2a08e1e8a45ec005 214 Gene3D G3DSA:1.10.3480.10 2 212 2.9E-50 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VV93_RS10200 78df51bc9b3be91a2a08e1e8a45ec005 214 Pfam PF02613 Nitrate reductase delta subunit 50 182 1.6E-38 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VV93_RS06175 eb4c5e1447a00b9a46c120230e780139 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VV93_RS06175 eb4c5e1447a00b9a46c120230e780139 255 Pfam PF01026 TatD related DNase 3 253 5.4E-79 T 23-04-2016 IPR001130 TatD family GO:0016788 VV93_RS06175 eb4c5e1447a00b9a46c120230e780139 255 PANTHER PTHR10060 1 253 6.8E-128 T 23-04-2016 IPR001130 TatD family GO:0016788 VV93_RS06175 eb4c5e1447a00b9a46c120230e780139 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VV93_RS06175 eb4c5e1447a00b9a46c120230e780139 255 SUPERFAMILY SSF51556 1 253 5.41E-87 T 23-04-2016 IPR032466 Metal-dependent hydrolase VV93_RS06175 eb4c5e1447a00b9a46c120230e780139 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VV93_RS06175 eb4c5e1447a00b9a46c120230e780139 255 Gene3D G3DSA:3.20.20.140 1 253 4.3E-89 T 23-04-2016 VV93_RS06175 eb4c5e1447a00b9a46c120230e780139 255 PIRSF PIRSF005902 1 255 3.6E-83 T 23-04-2016 IPR001130 TatD family GO:0016788 VV93_RS06175 eb4c5e1447a00b9a46c120230e780139 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 5.6E-93 T 23-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 VV93_RS06175 eb4c5e1447a00b9a46c120230e780139 255 PANTHER PTHR10060:SF20 1 253 6.8E-128 T 23-04-2016 VV93_RS03160 99fa8cdfd675ec384f7b512091c2071d 311 Gene3D G3DSA:2.40.30.30 188 308 1.1E-40 T 23-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 VV93_RS03160 99fa8cdfd675ec384f7b512091c2071d 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 2.3E-108 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 VV93_RS03160 99fa8cdfd675ec384f7b512091c2071d 311 Pfam PF01687 Riboflavin kinase 184 306 4.0E-38 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 VV93_RS03160 99fa8cdfd675ec384f7b512091c2071d 311 SUPERFAMILY SSF82114 174 309 1.92E-45 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 VV93_RS03160 99fa8cdfd675ec384f7b512091c2071d 311 PIRSF PIRSF004491 1 311 2.4E-106 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 VV93_RS03160 99fa8cdfd675ec384f7b512091c2071d 311 SUPERFAMILY SSF52374 15 175 3.75E-33 T 23-04-2016 VV93_RS03160 99fa8cdfd675ec384f7b512091c2071d 311 PANTHER PTHR22749:SF0 1 308 9.1E-140 T 23-04-2016 VV93_RS03160 99fa8cdfd675ec384f7b512091c2071d 311 SMART SM00904 183 307 5.5E-63 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 VV93_RS03160 99fa8cdfd675ec384f7b512091c2071d 311 PANTHER PTHR22749 1 308 9.1E-140 T 23-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 VV93_RS03160 99fa8cdfd675ec384f7b512091c2071d 311 Pfam PF06574 FAD synthetase 12 167 3.0E-57 T 23-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 VV93_RS03160 99fa8cdfd675ec384f7b512091c2071d 311 Gene3D G3DSA:3.40.50.620 1 186 3.8E-66 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS05860 389e45be803e00650066e10870c86a1a 293 SUPERFAMILY SSF89550 165 275 5.49E-55 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 VV93_RS05860 389e45be803e00650066e10870c86a1a 293 SUPERFAMILY SSF89550 1 83 5.49E-55 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 VV93_RS05860 389e45be803e00650066e10870c86a1a 293 PANTHER PTHR30007:SF4 1 275 3.4E-105 T 23-04-2016 VV93_RS05860 389e45be803e00650066e10870c86a1a 293 Pfam PF02811 PHP domain 4 160 2.8E-10 T 23-04-2016 IPR004013 PHP domain GO:0003824 VV93_RS05860 389e45be803e00650066e10870c86a1a 293 PANTHER PTHR30007 1 275 3.4E-105 T 23-04-2016 VV93_RS05860 389e45be803e00650066e10870c86a1a 293 SMART SM00481 3 70 7.8E-17 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 VV93_RS05860 389e45be803e00650066e10870c86a1a 293 Gene3D G3DSA:3.20.20.140 157 261 1.9E-47 T 23-04-2016 VV93_RS05860 389e45be803e00650066e10870c86a1a 293 Gene3D G3DSA:3.20.20.140 1 88 1.9E-47 T 23-04-2016 VV93_RS06500 61aec7809a86773a4f27fe7ea9730b56 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.571 T 23-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 VV93_RS06500 61aec7809a86773a4f27fe7ea9730b56 245 Gene3D G3DSA:3.20.20.70 2 242 4.2E-76 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS06500 61aec7809a86773a4f27fe7ea9730b56 245 SUPERFAMILY SSF51366 2 242 3.63E-63 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VV93_RS06500 61aec7809a86773a4f27fe7ea9730b56 245 Pfam PF00977 Histidine biosynthesis protein 2 234 1.3E-75 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 VV93_RS06500 61aec7809a86773a4f27fe7ea9730b56 245 PANTHER PTHR21235:SF15 2 245 1.2E-109 T 23-04-2016 VV93_RS06500 61aec7809a86773a4f27fe7ea9730b56 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.2E-77 T 23-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 VV93_RS06500 61aec7809a86773a4f27fe7ea9730b56 245 PANTHER PTHR21235 2 245 1.2E-109 T 23-04-2016 VV93_RS09735 2e279eb380d629d0c902b575b4baa19f 436 Pfam PF07690 Major Facilitator Superfamily 32 372 2.8E-17 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV93_RS09735 2e279eb380d629d0c902b575b4baa19f 436 PANTHER PTHR23514:SF11 13 187 6.3E-156 T 23-04-2016 VV93_RS09735 2e279eb380d629d0c902b575b4baa19f 436 PANTHER PTHR23514:SF11 206 436 6.3E-156 T 23-04-2016 VV93_RS09735 2e279eb380d629d0c902b575b4baa19f 436 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 26 428 2.3E-144 T 23-04-2016 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 VV93_RS09735 2e279eb380d629d0c902b575b4baa19f 436 Gene3D G3DSA:1.20.1250.20 29 236 1.9E-13 T 23-04-2016 VV93_RS09735 2e279eb380d629d0c902b575b4baa19f 436 PANTHER PTHR23514 13 187 6.3E-156 T 23-04-2016 VV93_RS09735 2e279eb380d629d0c902b575b4baa19f 436 PANTHER PTHR23514 206 436 6.3E-156 T 23-04-2016 VV93_RS09735 2e279eb380d629d0c902b575b4baa19f 436 SUPERFAMILY SSF103473 25 423 2.35E-30 T 23-04-2016 IPR020846 Major facilitator superfamily domain VV93_RS11785 1955e8d086b63ee0d096c3f92892f78c 283 Gene3D G3DSA:1.20.1080.10 4 252 1.0E-83 T 23-04-2016 IPR023271 Aquaporin-like VV93_RS11785 1955e8d086b63ee0d096c3f92892f78c 283 TIGRFAM TIGR00861 MIP: MIP family channel proteins 14 251 1.1E-68 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VV93_RS11785 1955e8d086b63ee0d096c3f92892f78c 283 SUPERFAMILY SSF81338 8 253 2.09E-74 T 23-04-2016 IPR023271 Aquaporin-like VV93_RS11785 1955e8d086b63ee0d096c3f92892f78c 283 PANTHER PTHR19139 4 251 9.4E-89 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VV93_RS11785 1955e8d086b63ee0d096c3f92892f78c 283 ProSitePatterns PS00221 MIP family signature. 67 75 - T 23-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 VV93_RS11785 1955e8d086b63ee0d096c3f92892f78c 283 PANTHER PTHR19139:SF100 4 251 9.4E-89 T 23-04-2016 VV93_RS11785 1955e8d086b63ee0d096c3f92892f78c 283 Pfam PF00230 Major intrinsic protein 5 251 2.6E-63 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VV93_RS11785 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 152 170 6.0E-51 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VV93_RS11785 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 49 73 6.0E-51 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VV93_RS11785 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 10 29 6.0E-51 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VV93_RS11785 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 86 105 6.0E-51 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VV93_RS11785 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 185 207 6.0E-51 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VV93_RS11785 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 234 254 6.0E-51 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VV93_RS11620 8338632259edc8db2aa6e332d7bc94ea 407 SUPERFAMILY SSF63380 105 272 1.7E-34 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VV93_RS11620 8338632259edc8db2aa6e332d7bc94ea 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 2.8E-16 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VV93_RS11620 8338632259edc8db2aa6e332d7bc94ea 407 Gene3D G3DSA:3.10.20.30 34 123 9.9E-21 T 23-04-2016 IPR012675 Beta-grasp domain VV93_RS11620 8338632259edc8db2aa6e332d7bc94ea 407 Gene3D G3DSA:3.40.50.80 269 406 8.5E-40 T 23-04-2016 VV93_RS11620 8338632259edc8db2aa6e332d7bc94ea 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 9.3E-228 T 23-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VV93_RS11620 8338632259edc8db2aa6e332d7bc94ea 407 PANTHER PTHR19370:SF32 62 176 5.7E-144 T 23-04-2016 VV93_RS11620 8338632259edc8db2aa6e332d7bc94ea 407 PANTHER PTHR19370:SF32 205 407 5.7E-144 T 23-04-2016 VV93_RS11620 8338632259edc8db2aa6e332d7bc94ea 407 PANTHER PTHR19370 62 176 5.7E-144 T 23-04-2016 VV93_RS11620 8338632259edc8db2aa6e332d7bc94ea 407 PANTHER PTHR19370 205 407 5.7E-144 T 23-04-2016 VV93_RS11620 8338632259edc8db2aa6e332d7bc94ea 407 SUPERFAMILY SSF52343 258 402 2.62E-35 T 23-04-2016 VV93_RS11620 8338632259edc8db2aa6e332d7bc94ea 407 PIRSF PIRSF000044 1 407 2.0E-217 T 23-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VV93_RS11620 8338632259edc8db2aa6e332d7bc94ea 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 43 115 2.3E-10 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VV93_RS11620 8338632259edc8db2aa6e332d7bc94ea 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.129 T 23-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VV93_RS11620 8338632259edc8db2aa6e332d7bc94ea 407 Gene3D G3DSA:2.40.30.10 124 264 5.1E-60 T 23-04-2016 VV93_RS11620 8338632259edc8db2aa6e332d7bc94ea 407 SUPERFAMILY SSF54292 36 124 6.56E-22 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VV93_RS11620 8338632259edc8db2aa6e332d7bc94ea 407 Pfam PF00970 Oxidoreductase FAD-binding domain 202 266 6.7E-9 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain VV93_RS11735 3144eac66b3e54401b5ca65a215a0564 445 PIRSF PIRSF000423 1 445 6.5E-205 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 VV93_RS11735 3144eac66b3e54401b5ca65a215a0564 445 Gene3D G3DSA:3.40.630.30 298 441 2.5E-42 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS11735 3144eac66b3e54401b5ca65a215a0564 445 Pfam PF00696 Amino acid kinase family 25 270 5.9E-27 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS11735 3144eac66b3e54401b5ca65a215a0564 445 Pfam PF00583 Acetyltransferase (GNAT) family 344 416 2.8E-5 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS11735 3144eac66b3e54401b5ca65a215a0564 445 PANTHER PTHR30602:SF3 1 445 1.7E-288 T 23-04-2016 VV93_RS11735 3144eac66b3e54401b5ca65a215a0564 445 Gene3D G3DSA:3.40.1160.10 23 294 2.7E-68 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS11735 3144eac66b3e54401b5ca65a215a0564 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 445 4.7E-207 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 VV93_RS11735 3144eac66b3e54401b5ca65a215a0564 445 PANTHER PTHR30602 1 445 1.7E-288 T 23-04-2016 VV93_RS11735 3144eac66b3e54401b5ca65a215a0564 445 SUPERFAMILY SSF53633 4 294 3.63E-66 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS11735 3144eac66b3e54401b5ca65a215a0564 445 SUPERFAMILY SSF55729 300 424 2.3E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS11735 3144eac66b3e54401b5ca65a215a0564 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 224.77 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 VV93_RS13470 7ccd05c382c95ed438f1ed12e6df2556 489 SUPERFAMILY SSF50249 39 128 1.35E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS13470 7ccd05c382c95ed438f1ed12e6df2556 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 2.4E-173 T 23-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VV93_RS13470 7ccd05c382c95ed438f1ed12e6df2556 489 PANTHER PTHR30001 1 489 8.6E-223 T 23-04-2016 VV93_RS13470 7ccd05c382c95ed438f1ed12e6df2556 489 SMART SM00316 37 122 5.8E-10 T 23-04-2016 IPR022967 RNA-binding domain, S1 VV93_RS13470 7ccd05c382c95ed438f1ed12e6df2556 489 Gene3D G3DSA:2.40.50.140 30 128 5.9E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS13470 7ccd05c382c95ed438f1ed12e6df2556 489 Pfam PF00575 S1 RNA binding domain 38 109 5.6E-6 T 23-04-2016 IPR003029 S1 domain GO:0003676 VV93_RS13470 7ccd05c382c95ed438f1ed12e6df2556 489 Pfam PF10150 Ribonuclease E/G family 124 393 2.7E-104 T 23-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VV93_RS07590 b900e7b90c0f2d03ded146b397979371 482 Gene3D G3DSA:1.20.5.320 435 481 1.2E-26 T 23-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VV93_RS07590 b900e7b90c0f2d03ded146b397979371 482 PANTHER PTHR11811 1 482 3.7E-300 T 23-04-2016 VV93_RS07590 b900e7b90c0f2d03ded146b397979371 482 PIRSF PIRSF000109 1 477 4.6E-242 T 23-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VV93_RS07590 b900e7b90c0f2d03ded146b397979371 482 Gene3D G3DSA:3.40.50.720 2 180 2.2E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS07590 b900e7b90c0f2d03ded146b397979371 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 3.8E-51 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 VV93_RS07590 b900e7b90c0f2d03ded146b397979371 482 SUPERFAMILY SSF48179 177 472 7.48E-127 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VV93_RS07590 b900e7b90c0f2d03ded146b397979371 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 23-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VV93_RS07590 b900e7b90c0f2d03ded146b397979371 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 1.4E-124 T 23-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VV93_RS07590 b900e7b90c0f2d03ded146b397979371 482 Gene3D G3DSA:1.10.1040.10 181 433 2.5E-113 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VV93_RS07590 b900e7b90c0f2d03ded146b397979371 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 1.1E-234 T 23-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VV93_RS07590 b900e7b90c0f2d03ded146b397979371 482 SMART SM01350 179 469 4.6E-215 T 23-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VV93_RS07590 b900e7b90c0f2d03ded146b397979371 482 SUPERFAMILY SSF51735 4 174 6.79E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS07590 b900e7b90c0f2d03ded146b397979371 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 3.5E-85 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VV93_RS07590 b900e7b90c0f2d03ded146b397979371 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 3.5E-85 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VV93_RS07590 b900e7b90c0f2d03ded146b397979371 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 3.5E-85 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VV93_RS07590 b900e7b90c0f2d03ded146b397979371 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 3.5E-85 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VV93_RS07590 b900e7b90c0f2d03ded146b397979371 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 3.5E-85 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VV93_RS07590 b900e7b90c0f2d03ded146b397979371 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 3.5E-85 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VV93_RS16170 1a4fa2f04488e85b774d6808cafda7be 309 Gene3D G3DSA:3.30.70.270 117 274 6.3E-33 T 23-04-2016 VV93_RS16170 1a4fa2f04488e85b774d6808cafda7be 309 SUPERFAMILY SSF55073 120 261 5.81E-30 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS16170 1a4fa2f04488e85b774d6808cafda7be 309 Pfam PF00672 HAMP domain 37 105 2.9E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS16170 1a4fa2f04488e85b774d6808cafda7be 309 Pfam PF00990 Diguanylate cyclase, GGDEF domain 117 261 3.0E-28 T 23-04-2016 IPR000160 GGDEF domain VV93_RS16170 1a4fa2f04488e85b774d6808cafda7be 309 SMART SM00304 56 109 1.5E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS16170 1a4fa2f04488e85b774d6808cafda7be 309 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 112 261 1.9E-22 T 23-04-2016 IPR000160 GGDEF domain VV93_RS16170 1a4fa2f04488e85b774d6808cafda7be 309 PANTHER PTHR10799 16 72 5.1E-32 T 23-04-2016 VV93_RS16170 1a4fa2f04488e85b774d6808cafda7be 309 PANTHER PTHR10799:SF710 142 309 5.1E-32 T 23-04-2016 VV93_RS16170 1a4fa2f04488e85b774d6808cafda7be 309 PANTHER PTHR10799:SF710 16 72 5.1E-32 T 23-04-2016 VV93_RS16170 1a4fa2f04488e85b774d6808cafda7be 309 SUPERFAMILY SSF158472 57 106 7.45E-9 T 23-04-2016 VV93_RS16170 1a4fa2f04488e85b774d6808cafda7be 309 PANTHER PTHR10799 142 309 5.1E-32 T 23-04-2016 VV93_RS16170 1a4fa2f04488e85b774d6808cafda7be 309 SMART SM00267 104 268 1.6E-26 T 23-04-2016 IPR000160 GGDEF domain VV93_RS01345 f7a5d3a454946e1396adc6987e3e3d92 706 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 163 169 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV93_RS01345 f7a5d3a454946e1396adc6987e3e3d92 706 SUPERFAMILY SSF53335 136 320 1.2E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS01345 f7a5d3a454946e1396adc6987e3e3d92 706 SUPERFAMILY SSF53335 434 525 1.2E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS01345 f7a5d3a454946e1396adc6987e3e3d92 706 Pfam PF01555 DNA methylase 160 517 5.9E-22 T 23-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 VV93_RS01345 f7a5d3a454946e1396adc6987e3e3d92 706 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 487 501 2.4E-6 T 23-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 VV93_RS01345 f7a5d3a454946e1396adc6987e3e3d92 706 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 160 172 2.4E-6 T 23-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 VV93_RS01345 f7a5d3a454946e1396adc6987e3e3d92 706 Gene3D G3DSA:3.40.50.150 418 567 2.2E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS01345 f7a5d3a454946e1396adc6987e3e3d92 706 Gene3D G3DSA:3.40.50.150 137 296 2.2E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 SUPERFAMILY SSF54106 343 387 1.57E-10 T 23-04-2016 IPR018392 LysM domain VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 Pfam PF01476 LysM domain 419 461 2.0E-11 T 23-04-2016 IPR018392 LysM domain VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 Pfam PF01476 LysM domain 476 517 8.4E-11 T 23-04-2016 IPR018392 LysM domain VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 Pfam PF01476 LysM domain 345 387 3.1E-10 T 23-04-2016 IPR018392 LysM domain VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 Gene3D G3DSA:1.10.530.10 109 272 1.4E-45 T 23-04-2016 VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 134 162 - T 23-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 SUPERFAMILY SSF54106 417 462 1.44E-10 T 23-04-2016 IPR018392 LysM domain VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 PANTHER PTHR21666:SF203 55 501 1.2E-200 T 23-04-2016 VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 Pfam PF01464 Transglycosylase SLT domain 128 227 8.9E-23 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 SMART SM00257 475 519 1.0E-10 T 23-04-2016 IPR018392 LysM domain VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 SMART SM00257 418 462 2.0E-13 T 23-04-2016 IPR018392 LysM domain VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 SMART SM00257 344 387 1.0E-12 T 23-04-2016 IPR018392 LysM domain VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 PANTHER PTHR21666 55 501 1.2E-200 T 23-04-2016 VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 SUPERFAMILY SSF53955 113 268 1.8E-41 T 23-04-2016 IPR023346 Lysozyme-like domain VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 Gene3D G3DSA:3.10.350.10 473 519 3.0E-15 T 23-04-2016 IPR018392 LysM domain VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 Gene3D G3DSA:3.10.350.10 342 388 1.0E-15 T 23-04-2016 IPR018392 LysM domain VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 Gene3D G3DSA:3.10.350.10 418 463 1.1E-16 T 23-04-2016 IPR018392 LysM domain VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 SUPERFAMILY SSF54106 474 519 5.62E-10 T 23-04-2016 IPR018392 LysM domain VV93_RS11370 b1d700b3b2d2677e71efe2e2c38e08e6 527 Pfam PF06474 MltD lipid attachment motif 1 19 5.8E-8 T 23-04-2016 IPR010511 Lytic murein transglycosylase D , lipid attachment domain VV93_RS06285 722cb886957a5a02c5d5bcc3fe9d9b4d 613 Gene3D G3DSA:3.10.105.10 338 545 6.3E-44 T 23-04-2016 VV93_RS06285 722cb886957a5a02c5d5bcc3fe9d9b4d 613 SUPERFAMILY SSF53850 45 566 1.38E-95 T 23-04-2016 VV93_RS06285 722cb886957a5a02c5d5bcc3fe9d9b4d 613 PIRSF PIRSF002741 3 572 1.4E-67 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VV93_RS06285 722cb886957a5a02c5d5bcc3fe9d9b4d 613 Gene3D G3DSA:3.40.190.10 168 337 1.1E-15 T 23-04-2016 VV93_RS06285 722cb886957a5a02c5d5bcc3fe9d9b4d 613 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 491 1.0E-63 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain VV93_RS06285 722cb886957a5a02c5d5bcc3fe9d9b4d 613 Gene3D G3DSA:3.90.76.10 85 167 4.1E-19 T 23-04-2016 VV93_RS06285 722cb886957a5a02c5d5bcc3fe9d9b4d 613 PANTHER PTHR30290 1 587 1.1E-66 T 23-04-2016 VV93_RS10210 014fdb82d3532240dad03560edd86b49 197 Pfam PF04993 TfoX N-terminal domain 12 103 4.5E-30 T 23-04-2016 IPR007076 TfoX, N-terminal VV93_RS10210 014fdb82d3532240dad03560edd86b49 197 PANTHER PTHR36121:SF1 1 195 1.9E-48 T 23-04-2016 VV93_RS10210 014fdb82d3532240dad03560edd86b49 197 PANTHER PTHR36121 1 195 1.9E-48 T 23-04-2016 VV93_RS10210 014fdb82d3532240dad03560edd86b49 197 SUPERFAMILY SSF159894 5 103 1.54E-30 T 23-04-2016 VV93_RS10210 014fdb82d3532240dad03560edd86b49 197 PIRSF PIRSF028788 1 197 1.0E-50 T 23-04-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type VV93_RS10210 014fdb82d3532240dad03560edd86b49 197 Gene3D G3DSA:1.10.150.20 114 195 5.8E-30 T 23-04-2016 VV93_RS10210 014fdb82d3532240dad03560edd86b49 197 Pfam PF04994 TfoX C-terminal domain 115 194 1.0E-31 T 23-04-2016 IPR007077 TfoX, C-terminal VV93_RS10210 014fdb82d3532240dad03560edd86b49 197 Gene3D G3DSA:3.30.1460.30 3 104 4.5E-36 T 23-04-2016 IPR007076 TfoX, N-terminal VV93_RS05480 60d752eb09384f9aaa56c306c4abceeb 154 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 27 150 37.051 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VV93_RS05480 60d752eb09384f9aaa56c306c4abceeb 154 PANTHER PTHR10173 19 154 1.7E-62 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 VV93_RS05480 60d752eb09384f9aaa56c306c4abceeb 154 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 26 151 2.1E-54 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VV93_RS05480 60d752eb09384f9aaa56c306c4abceeb 154 PANTHER PTHR10173:SF18 19 154 1.7E-62 T 23-04-2016 VV93_RS05480 60d752eb09384f9aaa56c306c4abceeb 154 SUPERFAMILY SSF51316 25 151 7.32E-57 T 23-04-2016 IPR011057 Mss4-like VV93_RS05480 60d752eb09384f9aaa56c306c4abceeb 154 Gene3D G3DSA:2.170.150.20 20 151 1.7E-59 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VV93_RS05480 60d752eb09384f9aaa56c306c4abceeb 154 Pfam PF01641 SelR domain 30 148 1.1E-52 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VV93_RS05710 38a618d84d37eab441d9afc0b0317b98 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 6.6E-90 T 23-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 VV93_RS05710 38a618d84d37eab441d9afc0b0317b98 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 4.9E-62 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VV93_RS05710 38a618d84d37eab441d9afc0b0317b98 192 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.264 T 23-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 VV93_RS05710 38a618d84d37eab441d9afc0b0317b98 192 PANTHER PTHR30335 2 192 1.9E-131 T 23-04-2016 VV93_RS05710 38a618d84d37eab441d9afc0b0317b98 192 PIRSF PIRSF006102 1 192 1.7E-64 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VV93_RS05710 38a618d84d37eab441d9afc0b0317b98 192 PANTHER PTHR30335:SF0 2 192 1.9E-131 T 23-04-2016 VV93_RS06555 2cd63f88df72d994958ed995a535c421 291 PANTHER PTHR30126 1 288 1.5E-62 T 23-04-2016 VV93_RS06555 2cd63f88df72d994958ed995a535c421 291 Pfam PF03466 LysR substrate binding domain 92 257 8.8E-18 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS06555 2cd63f88df72d994958ed995a535c421 291 Gene3D G3DSA:1.10.10.10 1 79 4.0E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS06555 2cd63f88df72d994958ed995a535c421 291 Gene3D G3DSA:3.40.190.10 80 191 3.2E-9 T 23-04-2016 VV93_RS06555 2cd63f88df72d994958ed995a535c421 291 SUPERFAMILY SSF53850 92 290 2.47E-24 T 23-04-2016 VV93_RS06555 2cd63f88df72d994958ed995a535c421 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 60 6.3E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS06555 2cd63f88df72d994958ed995a535c421 291 SUPERFAMILY SSF46785 3 84 1.2E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS06555 2cd63f88df72d994958ed995a535c421 291 PANTHER PTHR30126:SF29 1 288 1.5E-62 T 23-04-2016 VV93_RS06555 2cd63f88df72d994958ed995a535c421 291 Gene3D G3DSA:3.40.190.10 192 243 1.3E-5 T 23-04-2016 VV93_RS13240 f3d04e9b353e513734e8301bbc398c5f 102 PIRSF PIRSF000699 1 102 7.0E-37 T 23-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VV93_RS13240 f3d04e9b353e513734e8301bbc398c5f 102 PANTHER PTHR34382:SF2 1 100 1.6E-43 T 23-04-2016 VV93_RS13240 f3d04e9b353e513734e8301bbc398c5f 102 Gene3D G3DSA:1.20.58.80 2 100 5.2E-38 T 23-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VV93_RS13240 f3d04e9b353e513734e8301bbc398c5f 102 PANTHER PTHR34382 1 100 1.6E-43 T 23-04-2016 VV93_RS13240 f3d04e9b353e513734e8301bbc398c5f 102 SUPERFAMILY SSF46973 2 98 2.09E-33 T 23-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VV93_RS13240 f3d04e9b353e513734e8301bbc398c5f 102 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 98 3.0E-33 T 23-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VV93_RS13885 10ce6e4ad02671c37fca7ae5a9dfe88d 297 PANTHER PTHR21091 149 280 2.8E-43 T 23-04-2016 VV93_RS13885 10ce6e4ad02671c37fca7ae5a9dfe88d 297 Gene3D G3DSA:3.20.20.220 16 295 8.6E-107 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like VV93_RS13885 10ce6e4ad02671c37fca7ae5a9dfe88d 297 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 2.2E-101 T 23-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 VV93_RS13885 10ce6e4ad02671c37fca7ae5a9dfe88d 297 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 3.7E-102 T 23-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 VV93_RS13885 10ce6e4ad02671c37fca7ae5a9dfe88d 297 SUPERFAMILY SSF51730 22 294 7.65E-96 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like VV93_RS09540 c25dbc38ad8c8679ba3d89948eca15a8 535 PANTHER PTHR41533:SF1 18 528 3.2E-107 T 23-04-2016 VV93_RS09540 c25dbc38ad8c8679ba3d89948eca15a8 535 SUPERFAMILY SSF141523 416 467 1.83E-17 T 23-04-2016 VV93_RS09540 c25dbc38ad8c8679ba3d89948eca15a8 535 SUPERFAMILY SSF141523 306 360 1.83E-17 T 23-04-2016 VV93_RS09540 c25dbc38ad8c8679ba3d89948eca15a8 535 Pfam PF03734 L,D-transpeptidase catalytic domain 308 472 9.1E-27 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 VV93_RS09540 c25dbc38ad8c8679ba3d89948eca15a8 535 Pfam PF01471 Putative peptidoglycan binding domain 243 280 9.3E-10 T 23-04-2016 IPR002477 Peptidoglycan binding-like VV93_RS09540 c25dbc38ad8c8679ba3d89948eca15a8 535 Gene3D G3DSA:2.40.440.10 418 468 2.8E-10 T 23-04-2016 VV93_RS09540 c25dbc38ad8c8679ba3d89948eca15a8 535 Gene3D G3DSA:2.40.440.10 302 351 2.8E-10 T 23-04-2016 VV93_RS09540 c25dbc38ad8c8679ba3d89948eca15a8 535 SUPERFAMILY SSF47090 210 288 1.33E-14 T 23-04-2016 IPR002477 Peptidoglycan binding-like VV93_RS09540 c25dbc38ad8c8679ba3d89948eca15a8 535 Gene3D G3DSA:1.10.101.10 215 288 7.1E-16 T 23-04-2016 IPR002477 Peptidoglycan binding-like VV93_RS09540 c25dbc38ad8c8679ba3d89948eca15a8 535 PANTHER PTHR41533 18 528 3.2E-107 T 23-04-2016 VV93_RS01205 847f6b251406de115ed46e28bb3d3c58 175 PANTHER PTHR30625:SF0 74 175 6.1E-22 T 23-04-2016 VV93_RS01205 847f6b251406de115ed46e28bb3d3c58 175 PANTHER PTHR30625 74 175 6.1E-22 T 23-04-2016 VV93_RS01205 847f6b251406de115ed46e28bb3d3c58 175 Pfam PF01618 MotA/TolQ/ExbB proton channel family 51 168 2.8E-20 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VV93_RS11500 1320e4228314c9fb12f52e18a2862163 245 SUPERFAMILY SSF55120 2 237 4.96E-61 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS11500 1320e4228314c9fb12f52e18a2862163 245 PANTHER PTHR11079 3 245 6.9E-85 T 23-04-2016 VV93_RS11500 1320e4228314c9fb12f52e18a2862163 245 PANTHER PTHR11079:SF60 3 245 6.9E-85 T 23-04-2016 VV93_RS11500 1320e4228314c9fb12f52e18a2862163 245 Pfam PF00849 RNA pseudouridylate synthase 11 170 4.4E-32 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS11500 1320e4228314c9fb12f52e18a2862163 245 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS06510 7fbe0343402029bebf518ed10bc46f81 211 PANTHER PTHR21256:SF16 13 211 5.5E-114 T 23-04-2016 VV93_RS06510 7fbe0343402029bebf518ed10bc46f81 211 PANTHER PTHR21256 13 211 5.5E-114 T 23-04-2016 VV93_RS06510 7fbe0343402029bebf518ed10bc46f81 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 1.6E-31 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 VV93_RS06510 7fbe0343402029bebf518ed10bc46f81 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 7.5E-32 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VV93_RS06510 7fbe0343402029bebf518ed10bc46f81 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 8.0E-24 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 VV93_RS06510 7fbe0343402029bebf518ed10bc46f81 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 37.704 T 23-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 VV93_RS06510 7fbe0343402029bebf518ed10bc46f81 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.599 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VV93_RS06510 7fbe0343402029bebf518ed10bc46f81 211 SUPERFAMILY SSF101386 123 210 2.06E-25 T 23-04-2016 VV93_RS06510 7fbe0343402029bebf518ed10bc46f81 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 4.9E-18 T 23-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VV93_RS06510 7fbe0343402029bebf518ed10bc46f81 211 SUPERFAMILY SSF141734 14 124 8.24E-46 T 23-04-2016 VV93_RS12450 e8b824cf297d662dcbd74db38a413b63 789 Pfam PF00905 Penicillin binding protein transpeptidase domain 452 691 7.9E-24 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VV93_RS12450 e8b824cf297d662dcbd74db38a413b63 789 PANTHER PTHR32282:SF11 176 754 7.4E-258 T 23-04-2016 VV93_RS12450 e8b824cf297d662dcbd74db38a413b63 789 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 193 727 1.9E-154 T 23-04-2016 VV93_RS12450 e8b824cf297d662dcbd74db38a413b63 789 Pfam PF14814 Bifunctional transglycosylase second domain 93 177 8.9E-26 T 23-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS12450 e8b824cf297d662dcbd74db38a413b63 789 Gene3D G3DSA:3.40.710.10 363 765 5.8E-109 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS12450 e8b824cf297d662dcbd74db38a413b63 789 SUPERFAMILY SSF53955 186 382 2.81E-69 T 23-04-2016 IPR023346 Lysozyme-like domain VV93_RS12450 e8b824cf297d662dcbd74db38a413b63 789 Gene3D G3DSA:3.30.2060.10 92 180 3.7E-28 T 23-04-2016 VV93_RS12450 e8b824cf297d662dcbd74db38a413b63 789 Gene3D G3DSA:1.10.3810.10 186 362 4.3E-68 T 23-04-2016 VV93_RS12450 e8b824cf297d662dcbd74db38a413b63 789 PIRSF PIRSF002799 5 789 0.0 T 23-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS12450 e8b824cf297d662dcbd74db38a413b63 789 SUPERFAMILY SSF56601 342 364 1.3E-108 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS12450 e8b824cf297d662dcbd74db38a413b63 789 SUPERFAMILY SSF56601 392 769 1.3E-108 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS12450 e8b824cf297d662dcbd74db38a413b63 789 PANTHER PTHR32282 176 754 7.4E-258 T 23-04-2016 VV93_RS12450 e8b824cf297d662dcbd74db38a413b63 789 Pfam PF00912 Transglycosylase 189 360 1.2E-59 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 VV93_RS12450 e8b824cf297d662dcbd74db38a413b63 789 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 48 770 0.0 T 23-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS11275 2ba9b1ec30eefe28ac1a1112a014e7f0 189 Pfam PF03358 NADPH-dependent FMN reductase 14 134 1.8E-9 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VV93_RS11275 2ba9b1ec30eefe28ac1a1112a014e7f0 189 SUPERFAMILY SSF52218 4 186 1.44E-53 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS11275 2ba9b1ec30eefe28ac1a1112a014e7f0 189 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 23-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VV93_RS11275 2ba9b1ec30eefe28ac1a1112a014e7f0 189 Gene3D G3DSA:3.40.50.360 4 187 8.3E-65 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS11275 2ba9b1ec30eefe28ac1a1112a014e7f0 189 PANTHER PTHR30546 3 185 9.2E-65 T 23-04-2016 VV93_RS02135 441a80e334bb34d8555e23d689b4d13e 148 SUPERFAMILY SSF55804 1 147 3.79E-42 T 23-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 VV93_RS02135 441a80e334bb34d8555e23d689b4d13e 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 147 4.2E-53 T 23-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VV93_RS02135 441a80e334bb34d8555e23d689b4d13e 148 PANTHER PTHR30505 1 147 7.6E-76 T 23-04-2016 VV93_RS02135 441a80e334bb34d8555e23d689b4d13e 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VV93_RS02135 441a80e334bb34d8555e23d689b4d13e 148 Gene3D G3DSA:3.40.930.10 1 147 1.3E-46 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VV93_RS02135 441a80e334bb34d8555e23d689b4d13e 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 147 9.6E-39 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VV93_RS02135 441a80e334bb34d8555e23d689b4d13e 148 PANTHER PTHR30505:SF6 1 147 7.6E-76 T 23-04-2016 VV93_RS10310 ec27d0ff4ad7b20544e5469268237d60 316 Gene3D G3DSA:2.40.160.10 29 316 4.1E-30 T 23-04-2016 IPR023614 Porin domain VV93_RS10310 ec27d0ff4ad7b20544e5469268237d60 316 SUPERFAMILY SSF56935 30 316 3.66E-29 T 23-04-2016 VV93_RS10310 ec27d0ff4ad7b20544e5469268237d60 316 Pfam PF13609 Gram-negative porin 7 304 6.5E-25 T 23-04-2016 VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 216 332 4.9E-12 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 523 541 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 307 319 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 Gene3D G3DSA:3.40.50.300 447 667 6.0E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 739 0.0 T 23-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 SUPERFAMILY SSF81923 1 142 1.7E-58 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 Gene3D G3DSA:3.40.50.300 172 354 7.0E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 SUPERFAMILY SSF52540 442 749 1.39E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 538 556 4.9E-36 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 600 614 4.9E-36 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 496 514 4.9E-36 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 567 585 4.9E-36 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 SMART SM01086 658 747 1.8E-36 T 23-04-2016 IPR019489 Clp ATPase, C-terminal VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 SMART SM00382 211 356 1.4E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 SMART SM00382 492 659 1.3E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 PANTHER PTHR11638:SF111 157 757 0.0 T 23-04-2016 VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 PANTHER PTHR11638:SF111 1 139 0.0 T 23-04-2016 VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 658 738 1.5E-23 T 23-04-2016 IPR019489 Clp ATPase, C-terminal VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 PANTHER PTHR11638 157 757 0.0 T 23-04-2016 VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 PANTHER PTHR11638 1 139 0.0 T 23-04-2016 VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 Gene3D G3DSA:1.10.1780.10 1 142 2.3E-43 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 SUPERFAMILY SSF52540 172 431 1.32E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 59 1.0E-10 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 Gene3D G3DSA:1.10.8.60 357 441 9.2E-31 T 23-04-2016 VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 491 652 1.7E-47 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VV93_RS10280 ea653cbb8f94b1d07de5c7f63fae1e2a 758 Gene3D G3DSA:1.10.8.60 668 754 6.4E-31 T 23-04-2016 VV93_RS15120 26e149818aaa382554ba22165dd437af 201 ProSitePatterns PS00194 Thioredoxin family active site. 42 60 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VV93_RS15120 26e149818aaa382554ba22165dd437af 201 SUPERFAMILY SSF52833 22 199 9.13E-46 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS15120 26e149818aaa382554ba22165dd437af 201 PANTHER PTHR35891:SF2 1 201 4.0E-80 T 23-04-2016 VV93_RS15120 26e149818aaa382554ba22165dd437af 201 PANTHER PTHR35891 1 201 4.0E-80 T 23-04-2016 VV93_RS15120 26e149818aaa382554ba22165dd437af 201 PIRSF PIRSF001488 1 201 1.8E-70 T 23-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VV93_RS15120 26e149818aaa382554ba22165dd437af 201 Pfam PF01323 DSBA-like thioredoxin domain 42 189 2.5E-29 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 VV93_RS15120 26e149818aaa382554ba22165dd437af 201 Gene3D G3DSA:3.40.30.10 1 118 4.4E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS15120 26e149818aaa382554ba22165dd437af 201 Gene3D G3DSA:3.40.30.10 120 198 1.4E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 5.4E-266 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 Gene3D G3DSA:3.30.930.10 414 584 6.3E-111 T 23-04-2016 VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 Gene3D G3DSA:3.30.930.10 131 275 6.3E-111 T 23-04-2016 VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 SUPERFAMILY SSF55681 420 582 1.05E-102 T 23-04-2016 VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 SUPERFAMILY SSF55681 108 287 1.05E-102 T 23-04-2016 VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 SUPERFAMILY SSF55261 288 419 2.78E-48 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 Gene3D G3DSA:2.40.50.140 1 106 2.9E-39 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 Pfam PF02938 GAD domain 307 406 1.4E-31 T 23-04-2016 IPR029351 GAD domain VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 2.8E-105 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 PANTHER PTHR22594 370 571 2.1E-250 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 PANTHER PTHR22594 1 296 2.1E-250 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 Gene3D G3DSA:3.30.1360.30 276 413 1.2E-47 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 36.915 T 23-04-2016 VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 SUPERFAMILY SSF50249 1 105 6.29E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 PANTHER PTHR22594:SF5 370 571 2.1E-250 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 PANTHER PTHR22594:SF5 1 296 2.1E-250 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS10110 2ece08cf7f47efea7daed7e7b759a122 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 3.7E-16 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VV93_RS04655 1270934fb842d2a3fdfddd6c1b9d292b 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 1.1E-68 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VV93_RS04655 1270934fb842d2a3fdfddd6c1b9d292b 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 VV93_RS04655 1270934fb842d2a3fdfddd6c1b9d292b 322 PANTHER PTHR10314:SF110 3 322 6.0E-161 T 23-04-2016 VV93_RS04655 1270934fb842d2a3fdfddd6c1b9d292b 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 4.5E-136 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 VV93_RS04655 1270934fb842d2a3fdfddd6c1b9d292b 322 PANTHER PTHR10314 3 322 6.0E-161 T 23-04-2016 VV93_RS04655 1270934fb842d2a3fdfddd6c1b9d292b 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 4.7E-143 T 23-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 VV93_RS04655 1270934fb842d2a3fdfddd6c1b9d292b 322 SUPERFAMILY SSF53686 3 313 2.36E-96 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VV93_RS04655 1270934fb842d2a3fdfddd6c1b9d292b 322 Gene3D G3DSA:3.40.50.1100 36 132 3.2E-38 T 23-04-2016 VV93_RS04655 1270934fb842d2a3fdfddd6c1b9d292b 322 Gene3D G3DSA:3.40.50.1100 133 312 6.3E-75 T 23-04-2016 VV93_RS01880 daaa3ab88a31c0ee04775d685cefcddc 117 SUPERFAMILY SSF53137 3 115 1.66E-51 T 23-04-2016 VV93_RS01880 daaa3ab88a31c0ee04775d685cefcddc 117 Gene3D G3DSA:3.30.420.100 24 117 1.1E-35 T 23-04-2016 VV93_RS01880 daaa3ab88a31c0ee04775d685cefcddc 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 4.8E-43 T 23-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01880 daaa3ab88a31c0ee04775d685cefcddc 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.753 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01880 daaa3ab88a31c0ee04775d685cefcddc 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 7.4E-44 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01880 daaa3ab88a31c0ee04775d685cefcddc 117 PANTHER PTHR12899 1 117 4.1E-47 T 23-04-2016 VV93_RS05250 d8c889cdaf42e281530e625962012a0a 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 2.3E-40 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 VV93_RS05250 d8c889cdaf42e281530e625962012a0a 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 5.0E-13 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VV93_RS05250 d8c889cdaf42e281530e625962012a0a 432 SUPERFAMILY SSF109998 248 429 3.53E-49 T 23-04-2016 IPR027304 Trigger factor/SurA domain VV93_RS05250 d8c889cdaf42e281530e625962012a0a 432 Gene3D G3DSA:3.30.70.1050 1 118 3.0E-40 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VV93_RS05250 d8c889cdaf42e281530e625962012a0a 432 PANTHER PTHR30560 1 430 1.8E-141 T 23-04-2016 VV93_RS05250 d8c889cdaf42e281530e625962012a0a 432 TIGRFAM TIGR00115 tig: trigger factor 11 412 1.6E-142 T 23-04-2016 IPR005215 Trigger factor GO:0015031 VV93_RS05250 d8c889cdaf42e281530e625962012a0a 432 SUPERFAMILY SSF54534 90 241 8.84E-37 T 23-04-2016 VV93_RS05250 d8c889cdaf42e281530e625962012a0a 432 SUPERFAMILY SSF102735 1 131 4.05E-41 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VV93_RS05250 d8c889cdaf42e281530e625962012a0a 432 PANTHER PTHR30560:SF3 1 430 1.8E-141 T 23-04-2016 VV93_RS05250 d8c889cdaf42e281530e625962012a0a 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 2.7E-43 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VV93_RS05250 d8c889cdaf42e281530e625962012a0a 432 PIRSF PIRSF003095 1 432 9.4E-128 T 23-04-2016 IPR005215 Trigger factor GO:0015031 VV93_RS05250 d8c889cdaf42e281530e625962012a0a 432 Hamap MF_00303 Trigger factor [tig]. 1 418 21.786 T 23-04-2016 IPR005215 Trigger factor GO:0015031 VV93_RS05250 d8c889cdaf42e281530e625962012a0a 432 Gene3D G3DSA:3.10.50.40 155 215 1.3E-9 T 23-04-2016 VV93_RS05250 d8c889cdaf42e281530e625962012a0a 432 Gene3D G3DSA:1.10.3120.10 216 388 1.5E-61 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 VV93_RS04195 9a586b4ca2fc27739f28b1d629d3e79c 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 8.8E-18 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS04195 9a586b4ca2fc27739f28b1d629d3e79c 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS04195 9a586b4ca2fc27739f28b1d629d3e79c 315 PANTHER PTHR30146:SF42 4 314 9.5E-169 T 23-04-2016 VV93_RS04195 9a586b4ca2fc27739f28b1d629d3e79c 315 Gene3D G3DSA:3.40.50.2300 175 278 2.4E-36 T 23-04-2016 VV93_RS04195 9a586b4ca2fc27739f28b1d629d3e79c 315 SUPERFAMILY SSF47413 3 60 2.51E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS04195 9a586b4ca2fc27739f28b1d629d3e79c 315 Pfam PF13377 Periplasmic binding protein-like domain 168 308 8.3E-19 T 23-04-2016 VV93_RS04195 9a586b4ca2fc27739f28b1d629d3e79c 315 PANTHER PTHR30146 4 314 9.5E-169 T 23-04-2016 VV93_RS04195 9a586b4ca2fc27739f28b1d629d3e79c 315 Gene3D G3DSA:3.40.50.2300 57 174 3.8E-25 T 23-04-2016 VV93_RS04195 9a586b4ca2fc27739f28b1d629d3e79c 315 SUPERFAMILY SSF53822 63 308 5.1E-61 T 23-04-2016 IPR028082 Periplasmic binding protein-like I VV93_RS04195 9a586b4ca2fc27739f28b1d629d3e79c 315 Gene3D G3DSA:1.10.260.40 6 56 5.3E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS04195 9a586b4ca2fc27739f28b1d629d3e79c 315 SMART SM00354 4 74 2.0E-29 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS04195 9a586b4ca2fc27739f28b1d629d3e79c 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 310 2.7E-134 T 23-04-2016 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 VV93_RS14405 adc4b6dfc7956aeb244b9e3c319526e6 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 3.6E-155 T 23-04-2016 IPR022462 Lysine-2,3-aminomutase-like VV93_RS14405 adc4b6dfc7956aeb244b9e3c319526e6 340 PANTHER PTHR30538:SF1 13 337 3.7E-128 T 23-04-2016 VV93_RS14405 adc4b6dfc7956aeb244b9e3c319526e6 340 Gene3D G3DSA:3.20.20.70 104 310 2.0E-15 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS14405 adc4b6dfc7956aeb244b9e3c319526e6 340 PIRSF PIRSF004911 3 340 4.8E-116 T 23-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VV93_RS14405 adc4b6dfc7956aeb244b9e3c319526e6 340 Pfam PF13353 4Fe-4S single cluster domain 115 183 3.8E-7 T 23-04-2016 VV93_RS14405 adc4b6dfc7956aeb244b9e3c319526e6 340 PANTHER PTHR30538 13 337 3.7E-128 T 23-04-2016 VV93_RS14405 adc4b6dfc7956aeb244b9e3c319526e6 340 SUPERFAMILY SSF102114 102 324 1.96E-25 T 23-04-2016 VV93_RS14405 adc4b6dfc7956aeb244b9e3c319526e6 340 Pfam PF04055 Radical SAM superfamily 117 239 1.8E-8 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VV93_RS14405 adc4b6dfc7956aeb244b9e3c319526e6 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 11 328 6.4E-124 T 23-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VV93_RS06985 2316252d29a46ee7cd8291e3cd03d173 595 SUPERFAMILY SSF52540 350 579 8.36E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06985 2316252d29a46ee7cd8291e3cd03d173 595 Pfam PF00005 ABC transporter 368 512 1.6E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS06985 2316252d29a46ee7cd8291e3cd03d173 595 PANTHER PTHR24221:SF261 1 591 0.0 T 23-04-2016 VV93_RS06985 2316252d29a46ee7cd8291e3cd03d173 595 SMART SM00382 375 566 3.0E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS06985 2316252d29a46ee7cd8291e3cd03d173 595 SUPERFAMILY SSF90123 12 330 3.14E-55 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VV93_RS06985 2316252d29a46ee7cd8291e3cd03d173 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 1.6E-175 T 23-04-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 VV93_RS06985 2316252d29a46ee7cd8291e3cd03d173 595 PANTHER PTHR24221 1 591 0.0 T 23-04-2016 VV93_RS06985 2316252d29a46ee7cd8291e3cd03d173 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS06985 2316252d29a46ee7cd8291e3cd03d173 595 Gene3D G3DSA:3.40.50.300 353 586 4.5E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06985 2316252d29a46ee7cd8291e3cd03d173 595 Pfam PF00664 ABC transporter transmembrane region 25 292 1.4E-42 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VV93_RS06985 2316252d29a46ee7cd8291e3cd03d173 595 Gene3D G3DSA:1.20.1560.10 12 330 7.9E-49 T 23-04-2016 VV93_RS08100 9dc779f1c556b56865adc52f0fd00117 352 Pfam PF01292 Prokaryotic cytochrome b561 125 306 1.3E-25 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VV93_RS08100 9dc779f1c556b56865adc52f0fd00117 352 SUPERFAMILY SSF81342 119 331 1.1E-45 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VV93_RS08100 9dc779f1c556b56865adc52f0fd00117 352 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 122 326 1.3E-82 T 23-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 VV93_RS08100 9dc779f1c556b56865adc52f0fd00117 352 PANTHER PTHR30074:SF2 31 344 1.3E-147 T 23-04-2016 VV93_RS08100 9dc779f1c556b56865adc52f0fd00117 352 PANTHER PTHR30074 31 344 1.3E-147 T 23-04-2016 VV93_RS08100 9dc779f1c556b56865adc52f0fd00117 352 Gene3D G3DSA:1.20.950.20 119 333 1.1E-63 T 23-04-2016 VV93_RS00400 1367fbe9cdfcadb3f2cfb19da3d692cc 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 1.1E-113 T 23-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 VV93_RS00400 1367fbe9cdfcadb3f2cfb19da3d692cc 393 SUPERFAMILY SSF48452 252 389 5.18E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS00400 1367fbe9cdfcadb3f2cfb19da3d692cc 393 Gene3D G3DSA:1.25.40.10 270 389 2.3E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS00400 1367fbe9cdfcadb3f2cfb19da3d692cc 393 SMART SM00028 327 360 0.0056 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS00400 1367fbe9cdfcadb3f2cfb19da3d692cc 393 PANTHER PTHR23083:SF396 257 389 4.3E-89 T 23-04-2016 VV93_RS00400 1367fbe9cdfcadb3f2cfb19da3d692cc 393 PANTHER PTHR23083:SF396 1 222 4.3E-89 T 23-04-2016 VV93_RS00400 1367fbe9cdfcadb3f2cfb19da3d692cc 393 PANTHER PTHR23083 257 389 4.3E-89 T 23-04-2016 VV93_RS00400 1367fbe9cdfcadb3f2cfb19da3d692cc 393 PANTHER PTHR23083 1 222 4.3E-89 T 23-04-2016 VV93_RS00400 1367fbe9cdfcadb3f2cfb19da3d692cc 393 SUPERFAMILY SSF48452 85 294 7.59E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS00400 1367fbe9cdfcadb3f2cfb19da3d692cc 393 Gene3D G3DSA:1.25.40.10 83 232 2.5E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS00400 1367fbe9cdfcadb3f2cfb19da3d692cc 393 Pfam PF07219 HemY protein N-terminus 26 132 3.2E-26 T 23-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 VV93_RS12540 86b4cf2552052ae117a02d49760c8862 255 Pfam PF07729 FCD domain 99 226 2.4E-17 T 23-04-2016 IPR011711 GntR, C-terminal VV93_RS12540 86b4cf2552052ae117a02d49760c8862 255 Gene3D G3DSA:1.10.10.10 7 77 3.0E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS12540 86b4cf2552052ae117a02d49760c8862 255 SMART SM00895 99 227 3.7E-18 T 23-04-2016 IPR011711 GntR, C-terminal VV93_RS12540 86b4cf2552052ae117a02d49760c8862 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 3.4E-25 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV93_RS12540 86b4cf2552052ae117a02d49760c8862 255 PANTHER PTHR11751 93 115 6.2E-46 T 23-04-2016 VV93_RS12540 86b4cf2552052ae117a02d49760c8862 255 PANTHER PTHR11751 1 77 6.2E-46 T 23-04-2016 VV93_RS12540 86b4cf2552052ae117a02d49760c8862 255 SMART SM00345 15 74 1.3E-27 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV93_RS12540 86b4cf2552052ae117a02d49760c8862 255 SUPERFAMILY SSF46785 5 76 2.73E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS12540 86b4cf2552052ae117a02d49760c8862 255 Gene3D G3DSA:1.20.120.530 98 238 5.8E-19 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VV93_RS12540 86b4cf2552052ae117a02d49760c8862 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.6E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV93_RS12540 86b4cf2552052ae117a02d49760c8862 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.6E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV93_RS12540 86b4cf2552052ae117a02d49760c8862 255 SUPERFAMILY SSF48008 98 235 1.15E-19 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VV93_RS12540 86b4cf2552052ae117a02d49760c8862 255 PANTHER PTHR11751:SF355 93 115 6.2E-46 T 23-04-2016 VV93_RS12540 86b4cf2552052ae117a02d49760c8862 255 PANTHER PTHR11751:SF355 1 77 6.2E-46 T 23-04-2016 VV93_RS07345 5f1c1b7b75740bb1132ecb94589aae6a 298 PANTHER PTHR21631:SF4 3 296 1.3E-158 T 23-04-2016 VV93_RS07345 5f1c1b7b75740bb1132ecb94589aae6a 298 PANTHER PTHR21631 3 296 1.3E-158 T 23-04-2016 VV93_RS07345 5f1c1b7b75740bb1132ecb94589aae6a 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 2.6E-127 T 23-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 VV93_RS07345 5f1c1b7b75740bb1132ecb94589aae6a 298 Gene3D G3DSA:3.20.20.60 6 291 2.8E-95 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS07345 5f1c1b7b75740bb1132ecb94589aae6a 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 15 258 1.5E-45 T 23-04-2016 VV93_RS07345 5f1c1b7b75740bb1132ecb94589aae6a 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.791 T 23-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 VV93_RS07345 5f1c1b7b75740bb1132ecb94589aae6a 298 SUPERFAMILY SSF51621 5 294 2.11E-96 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS07345 5f1c1b7b75740bb1132ecb94589aae6a 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 23-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 Pfam PF09382 RQC domain 409 517 5.9E-37 T 23-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 SMART SM00490 253 334 9.1E-29 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 Gene3D G3DSA:3.40.50.300 17 206 2.2E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 Pfam PF00570 HRDC domain 537 603 1.2E-22 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 SMART SM00956 414 517 3.0E-50 T 23-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 SUPERFAMILY SSF47819 534 608 5.23E-26 T 23-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 9.2E-190 T 23-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 Gene3D G3DSA:1.10.150.80 535 605 3.8E-23 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 PANTHER PTHR13710:SF81 17 607 1.2E-296 T 23-04-2016 VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 SUPERFAMILY SSF52540 17 203 1.47E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 Pfam PF00271 Helicase conserved C-terminal domain 229 334 2.0E-19 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 Pfam PF16124 RecQ zinc-binding 346 407 3.8E-18 T 23-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 SMART SM00487 25 221 8.7E-28 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 SUPERFAMILY SSF52540 211 458 3.78E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 Gene3D G3DSA:3.40.50.300 210 347 2.4E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 PANTHER PTHR13710 17 607 1.2E-296 T 23-04-2016 VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 Gene3D G3DSA:1.10.10.10 348 517 5.3E-63 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 Pfam PF00270 DEAD/DEAH box helicase 32 190 2.0E-17 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 SMART SM00341 533 611 2.9E-22 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VV93_RS14850 e3d29a941ddfb0cd7530b93fc64c2fb7 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 606 2.6E-252 T 23-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 VV93_RS01070 631576b031a72c900f84e30115144b9d 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 2.1E-43 T 23-04-2016 IPR013545 Type II secretion system protein G VV93_RS01070 631576b031a72c900f84e30115144b9d 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VV93_RS01070 631576b031a72c900f84e30115144b9d 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VV93_RS01070 631576b031a72c900f84e30115144b9d 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 10 142 3.7E-58 T 23-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 VV93_RS01070 631576b031a72c900f84e30115144b9d 147 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 6 28 9.9E-9 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS01070 631576b031a72c900f84e30115144b9d 147 SUPERFAMILY SSF54523 36 142 1.52E-38 T 23-04-2016 VV93_RS01070 631576b031a72c900f84e30115144b9d 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS01070 631576b031a72c900f84e30115144b9d 147 Gene3D G3DSA:3.30.700.10 11 76 8.7E-9 T 23-04-2016 VV93_RS01070 631576b031a72c900f84e30115144b9d 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 6.9E-9 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS01070 631576b031a72c900f84e30115144b9d 147 PANTHER PTHR30093 1 146 5.1E-73 T 23-04-2016 VV93_RS01070 631576b031a72c900f84e30115144b9d 147 PANTHER PTHR30093:SF9 1 146 5.1E-73 T 23-04-2016 VV93_RS03590 9cf4b0f8b09830897e6dee53630557c3 432 Pfam PF12404 Peptidase 5 81 1.4E-32 T 23-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VV93_RS03590 9cf4b0f8b09830897e6dee53630557c3 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 422 7.1E-99 T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VV93_RS03590 9cf4b0f8b09830897e6dee53630557c3 432 Gene3D G3DSA:3.40.630.10 95 430 1.1E-115 T 23-04-2016 VV93_RS03590 9cf4b0f8b09830897e6dee53630557c3 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VV93_RS03590 9cf4b0f8b09830897e6dee53630557c3 432 Hamap MF_00504 Peptidase B [pepB]. 3 428 70.41 T 23-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VV93_RS03590 9cf4b0f8b09830897e6dee53630557c3 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 8.5E-46 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV93_RS03590 9cf4b0f8b09830897e6dee53630557c3 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 8.5E-46 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV93_RS03590 9cf4b0f8b09830897e6dee53630557c3 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 8.5E-46 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV93_RS03590 9cf4b0f8b09830897e6dee53630557c3 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 8.5E-46 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV93_RS03590 9cf4b0f8b09830897e6dee53630557c3 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 8.5E-46 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV93_RS03590 9cf4b0f8b09830897e6dee53630557c3 432 PANTHER PTHR11963 42 432 5.0E-245 T 23-04-2016 VV93_RS03590 9cf4b0f8b09830897e6dee53630557c3 432 PANTHER PTHR11963:SF20 42 432 5.0E-245 T 23-04-2016 VV93_RS03590 9cf4b0f8b09830897e6dee53630557c3 432 PIRSF PIRSF036388 1 432 7.7E-223 T 23-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VV93_RS03590 9cf4b0f8b09830897e6dee53630557c3 432 SUPERFAMILY SSF53187 104 428 1.32E-99 T 23-04-2016 VV93_RS09485 a2412d07582d2579254e3a19353531e4 523 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 520 6.1E-136 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VV93_RS09485 a2412d07582d2579254e3a19353531e4 523 PANTHER PTHR30047 1 523 3.5E-221 T 23-04-2016 VV93_RS09485 a2412d07582d2579254e3a19353531e4 523 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 2.8E-173 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VV93_RS09485 a2412d07582d2579254e3a19353531e4 523 PANTHER PTHR30047:SF2 1 523 3.5E-221 T 23-04-2016 VV93_RS09485 a2412d07582d2579254e3a19353531e4 523 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 23-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 VV93_RS00030 e678d27ee7739a2f96113a7cfcca18f3 753 Pfam PF00990 Diguanylate cyclase, GGDEF domain 327 483 1.5E-41 T 23-04-2016 IPR000160 GGDEF domain VV93_RS00030 e678d27ee7739a2f96113a7cfcca18f3 753 Pfam PF03924 CHASE domain 133 235 4.1E-16 T 23-04-2016 IPR006189 CHASE domain VV93_RS00030 e678d27ee7739a2f96113a7cfcca18f3 753 Pfam PF00563 EAL domain 503 735 4.0E-74 T 23-04-2016 IPR001633 EAL domain VV93_RS00030 e678d27ee7739a2f96113a7cfcca18f3 753 PANTHER PTHR33121 487 753 1.7E-81 T 23-04-2016 VV93_RS00030 e678d27ee7739a2f96113a7cfcca18f3 753 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 323 485 4.8E-38 T 23-04-2016 IPR000160 GGDEF domain VV93_RS00030 e678d27ee7739a2f96113a7cfcca18f3 753 SUPERFAMILY SSF55073 332 488 1.8E-45 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS00030 e678d27ee7739a2f96113a7cfcca18f3 753 Gene3D G3DSA:3.30.70.270 329 492 2.6E-49 T 23-04-2016 VV93_RS00030 e678d27ee7739a2f96113a7cfcca18f3 753 SMART SM00267 316 487 2.0E-50 T 23-04-2016 IPR000160 GGDEF domain VV93_RS00030 e678d27ee7739a2f96113a7cfcca18f3 753 SMART SM01079 71 248 3.4E-40 T 23-04-2016 IPR006189 CHASE domain VV93_RS00030 e678d27ee7739a2f96113a7cfcca18f3 753 PANTHER PTHR33121:SF13 487 753 1.7E-81 T 23-04-2016 VV93_RS00030 e678d27ee7739a2f96113a7cfcca18f3 753 SUPERFAMILY SSF141868 503 745 1.11E-87 T 23-04-2016 IPR001633 EAL domain VV93_RS00030 e678d27ee7739a2f96113a7cfcca18f3 753 Gene3D G3DSA:3.20.20.450 500 745 2.9E-92 T 23-04-2016 IPR001633 EAL domain VV93_RS00030 e678d27ee7739a2f96113a7cfcca18f3 753 SMART SM00052 497 740 1.5E-108 T 23-04-2016 IPR001633 EAL domain VV93_RS10930 6c8df51cde14d198bf0f64b18604a97d 376 Gene3D G3DSA:3.40.50.2300 2 109 5.7E-30 T 23-04-2016 VV93_RS10930 6c8df51cde14d198bf0f64b18604a97d 376 PANTHER PTHR24421:SF16 1 373 3.3E-172 T 23-04-2016 VV93_RS10930 6c8df51cde14d198bf0f64b18604a97d 376 SUPERFAMILY SSF52172 2 109 1.39E-26 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS10930 6c8df51cde14d198bf0f64b18604a97d 376 SMART SM00448 3 126 2.7E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS10930 6c8df51cde14d198bf0f64b18604a97d 376 PANTHER PTHR24421 1 373 3.3E-172 T 23-04-2016 VV93_RS10930 6c8df51cde14d198bf0f64b18604a97d 376 Pfam PF00072 Response regulator receiver domain 5 109 6.2E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS10930 6c8df51cde14d198bf0f64b18604a97d 376 SUPERFAMILY SSF52738 185 370 1.7E-62 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VV93_RS10930 6c8df51cde14d198bf0f64b18604a97d 376 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 374 38.576 T 23-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VV93_RS10930 6c8df51cde14d198bf0f64b18604a97d 376 PIRSF PIRSF000876 1 374 1.9E-126 T 23-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VV93_RS10930 6c8df51cde14d198bf0f64b18604a97d 376 Pfam PF01339 CheB methylesterase 191 368 4.8E-58 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VV93_RS10930 6c8df51cde14d198bf0f64b18604a97d 376 Gene3D G3DSA:3.40.50.180 183 370 2.6E-72 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VV93_RS05150 d72e99536af7e1765c248a8970c07376 252 Gene3D G3DSA:3.40.1130.10 78 180 4.8E-8 T 23-04-2016 VV93_RS05150 d72e99536af7e1765c248a8970c07376 252 Pfam PF01553 Acyltransferase 73 191 3.3E-14 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VV93_RS05150 d72e99536af7e1765c248a8970c07376 252 SMART SM00563 86 196 3.7E-13 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VV93_RS05150 d72e99536af7e1765c248a8970c07376 252 SUPERFAMILY SSF69593 50 205 4.58E-24 T 23-04-2016 VV93_RS05150 d72e99536af7e1765c248a8970c07376 252 PANTHER PTHR10434 25 182 1.4E-18 T 23-04-2016 VV93_RS02035 081233d34c5206bd514b2acd4df6d82a 209 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 1.7E-67 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VV93_RS02035 081233d34c5206bd514b2acd4df6d82a 209 PANTHER PTHR10173:SF36 1 201 1.0E-98 T 23-04-2016 VV93_RS02035 081233d34c5206bd514b2acd4df6d82a 209 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 37.458 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VV93_RS02035 081233d34c5206bd514b2acd4df6d82a 209 PANTHER PTHR10173 1 201 1.0E-98 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 VV93_RS02035 081233d34c5206bd514b2acd4df6d82a 209 Gene3D G3DSA:3.30.1060.10 4 197 5.9E-79 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VV93_RS02035 081233d34c5206bd514b2acd4df6d82a 209 SUPERFAMILY SSF55068 3 207 5.1E-79 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VV93_RS02035 081233d34c5206bd514b2acd4df6d82a 209 Pfam PF01625 Peptide methionine sulfoxide reductase 45 197 1.4E-65 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VV93_RS13430 11664c5354e9d5d9bf5a430c67eae093 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 2.0E-43 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family VV93_RS13430 11664c5354e9d5d9bf5a430c67eae093 129 PANTHER PTHR11803 1 128 3.5E-52 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family VV93_RS13430 11664c5354e9d5d9bf5a430c67eae093 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 23-04-2016 IPR019897 RidA, conserved site VV93_RS13430 11664c5354e9d5d9bf5a430c67eae093 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 1.9E-52 T 23-04-2016 IPR006056 RidA family VV93_RS13430 11664c5354e9d5d9bf5a430c67eae093 129 Gene3D G3DSA:3.30.1330.40 5 128 5.9E-47 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VV93_RS13430 11664c5354e9d5d9bf5a430c67eae093 129 SUPERFAMILY SSF55298 2 128 2.36E-44 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VV93_RS08680 bfa544b62b39b03de651aaa7eb8895b6 129 ProSitePatterns PS00938 Initiation factor 3 signature. 16 29 - T 23-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 VV93_RS08680 bfa544b62b39b03de651aaa7eb8895b6 129 SUPERFAMILY SSF55200 41 129 2.49E-33 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 VV93_RS08680 bfa544b62b39b03de651aaa7eb8895b6 129 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 34 5.8E-14 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 VV93_RS08680 bfa544b62b39b03de651aaa7eb8895b6 129 Gene3D G3DSA:3.30.110.10 37 129 1.1E-38 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 VV93_RS08680 bfa544b62b39b03de651aaa7eb8895b6 129 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 129 1.4E-57 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 VV93_RS08680 bfa544b62b39b03de651aaa7eb8895b6 129 PANTHER PTHR10938 1 129 1.0E-49 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 VV93_RS08680 bfa544b62b39b03de651aaa7eb8895b6 129 Gene3D G3DSA:3.10.20.80 1 36 3.5E-16 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 VV93_RS08680 bfa544b62b39b03de651aaa7eb8895b6 129 SUPERFAMILY SSF54364 1 36 2.48E-13 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 VV93_RS08680 bfa544b62b39b03de651aaa7eb8895b6 129 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 41 127 7.8E-36 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 VV93_RS05905 6d0cf1cad48e6983153a245be3675d7f 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.5E-19 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS05905 6d0cf1cad48e6983153a245be3675d7f 214 SUPERFAMILY SSF52172 2 132 1.34E-33 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS05905 6d0cf1cad48e6983153a245be3675d7f 214 Pfam PF00072 Response regulator receiver domain 4 116 5.1E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS05905 6d0cf1cad48e6983153a245be3675d7f 214 Gene3D G3DSA:1.10.10.10 121 211 4.0E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS05905 6d0cf1cad48e6983153a245be3675d7f 214 SMART SM00421 146 203 9.8E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS05905 6d0cf1cad48e6983153a245be3675d7f 214 SUPERFAMILY SSF46894 136 210 2.41E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV93_RS05905 6d0cf1cad48e6983153a245be3675d7f 214 Gene3D G3DSA:3.40.50.2300 2 120 7.8E-34 T 23-04-2016 VV93_RS05905 6d0cf1cad48e6983153a245be3675d7f 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS05905 6d0cf1cad48e6983153a245be3675d7f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.1E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS05905 6d0cf1cad48e6983153a245be3675d7f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.1E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS05905 6d0cf1cad48e6983153a245be3675d7f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.1E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS05905 6d0cf1cad48e6983153a245be3675d7f 214 PANTHER PTHR26402:SF506 2 214 8.7E-111 T 23-04-2016 VV93_RS05905 6d0cf1cad48e6983153a245be3675d7f 214 SMART SM00448 2 115 1.1E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS05905 6d0cf1cad48e6983153a245be3675d7f 214 PANTHER PTHR26402 2 214 8.7E-111 T 23-04-2016 VV93_RS01055 0e0695a5632df5593e349d5e4445b3f9 673 PRINTS PR00811 Bacterial general secretion pathway protein D signature 343 353 6.0E-37 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS01055 0e0695a5632df5593e349d5e4445b3f9 673 PRINTS PR00811 Bacterial general secretion pathway protein D signature 575 593 6.0E-37 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS01055 0e0695a5632df5593e349d5e4445b3f9 673 PRINTS PR00811 Bacterial general secretion pathway protein D signature 598 612 6.0E-37 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS01055 0e0695a5632df5593e349d5e4445b3f9 673 PRINTS PR00811 Bacterial general secretion pathway protein D signature 445 469 6.0E-37 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS01055 0e0695a5632df5593e349d5e4445b3f9 673 PRINTS PR00811 Bacterial general secretion pathway protein D signature 480 490 6.0E-37 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS01055 0e0695a5632df5593e349d5e4445b3f9 673 Pfam PF03958 Bacterial type II/III secretion system short domain 266 343 9.4E-17 T 23-04-2016 IPR005644 NolW-like VV93_RS01055 0e0695a5632df5593e349d5e4445b3f9 673 Pfam PF03958 Bacterial type II/III secretion system short domain 125 186 1.0E-8 T 23-04-2016 IPR005644 NolW-like VV93_RS01055 0e0695a5632df5593e349d5e4445b3f9 673 Pfam PF03958 Bacterial type II/III secretion system short domain 191 258 4.3E-14 T 23-04-2016 IPR005644 NolW-like VV93_RS01055 0e0695a5632df5593e349d5e4445b3f9 673 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 620 4.4E-157 T 23-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 VV93_RS01055 0e0695a5632df5593e349d5e4445b3f9 673 PANTHER PTHR30332:SF3 25 638 7.1E-291 T 23-04-2016 VV93_RS01055 0e0695a5632df5593e349d5e4445b3f9 673 Pfam PF00263 Bacterial type II and III secretion system protein 449 611 6.8E-51 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 VV93_RS01055 0e0695a5632df5593e349d5e4445b3f9 673 PANTHER PTHR30332 25 638 7.1E-291 T 23-04-2016 VV93_RS01055 0e0695a5632df5593e349d5e4445b3f9 673 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 556 589 - T 23-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VV93_RS01055 0e0695a5632df5593e349d5e4445b3f9 673 PRINTS PR01032 Gene IV protein signature 538 566 1.8E-11 T 23-04-2016 VV93_RS01055 0e0695a5632df5593e349d5e4445b3f9 673 PRINTS PR01032 Gene IV protein signature 591 613 1.8E-11 T 23-04-2016 VV93_RS01055 0e0695a5632df5593e349d5e4445b3f9 673 PRINTS PR01032 Gene IV protein signature 470 493 1.8E-11 T 23-04-2016 VV93_RS12990 270a7f0bae514637d9bd50b7cf5fdbba 664 SMART SM00861 354 525 1.1E-67 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VV93_RS12990 270a7f0bae514637d9bd50b7cf5fdbba 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VV93_RS12990 270a7f0bae514637d9bd50b7cf5fdbba 664 Pfam PF02780 Transketolase, C-terminal domain 541 655 4.0E-21 T 23-04-2016 IPR033248 Transketolase, C-terminal domain VV93_RS12990 270a7f0bae514637d9bd50b7cf5fdbba 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 5.0E-166 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VV93_RS12990 270a7f0bae514637d9bd50b7cf5fdbba 664 SUPERFAMILY SSF52518 333 526 8.54E-69 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS12990 270a7f0bae514637d9bd50b7cf5fdbba 664 PANTHER PTHR11624 1 309 0.0 T 23-04-2016 IPR033247 Transketolase family VV93_RS12990 270a7f0bae514637d9bd50b7cf5fdbba 664 PANTHER PTHR11624 333 663 0.0 T 23-04-2016 IPR033247 Transketolase family VV93_RS12990 270a7f0bae514637d9bd50b7cf5fdbba 664 PANTHER PTHR11624:SF85 1 309 0.0 T 23-04-2016 VV93_RS12990 270a7f0bae514637d9bd50b7cf5fdbba 664 PANTHER PTHR11624:SF85 333 663 0.0 T 23-04-2016 VV93_RS12990 270a7f0bae514637d9bd50b7cf5fdbba 664 Gene3D G3DSA:3.40.50.970 5 318 1.5E-132 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS12990 270a7f0bae514637d9bd50b7cf5fdbba 664 Gene3D G3DSA:3.40.50.970 327 533 3.8E-82 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS12990 270a7f0bae514637d9bd50b7cf5fdbba 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 3.7E-48 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VV93_RS12990 270a7f0bae514637d9bd50b7cf5fdbba 664 Gene3D G3DSA:3.40.50.920 538 663 5.3E-51 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VV93_RS12990 270a7f0bae514637d9bd50b7cf5fdbba 664 SUPERFAMILY SSF52518 6 319 3.59E-119 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS12990 270a7f0bae514637d9bd50b7cf5fdbba 664 SUPERFAMILY SSF52922 533 664 2.36E-44 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VV93_RS12990 270a7f0bae514637d9bd50b7cf5fdbba 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 23-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VV93_RS12990 270a7f0bae514637d9bd50b7cf5fdbba 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VV93_RS02275 f5ced6011ed5e23de331d717534e9847 162 PANTHER PTHR22778:SF16 1 159 1.2E-44 T 23-04-2016 VV93_RS02275 f5ced6011ed5e23de331d717534e9847 162 PRINTS PR00070 Dihydrofolate reductase signature 92 106 1.1E-14 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VV93_RS02275 f5ced6011ed5e23de331d717534e9847 162 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.1E-14 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VV93_RS02275 f5ced6011ed5e23de331d717534e9847 162 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.1E-14 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VV93_RS02275 f5ced6011ed5e23de331d717534e9847 162 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.1E-14 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VV93_RS02275 f5ced6011ed5e23de331d717534e9847 162 Pfam PF00186 Dihydrofolate reductase 3 159 1.4E-60 T 23-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VV93_RS02275 f5ced6011ed5e23de331d717534e9847 162 SUPERFAMILY SSF53597 1 160 2.57E-57 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain VV93_RS02275 f5ced6011ed5e23de331d717534e9847 162 PANTHER PTHR22778 1 159 1.2E-44 T 23-04-2016 VV93_RS02275 f5ced6011ed5e23de331d717534e9847 162 PIRSF PIRSF000194 1 161 2.4E-62 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VV93_RS02275 f5ced6011ed5e23de331d717534e9847 162 Gene3D G3DSA:3.40.430.10 1 160 9.4E-61 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain VV93_RS17865 b3f271b2ad43e55be1e4899a25d34be5 71 SUPERFAMILY SSF53756 10 71 1.33E-21 T 23-04-2016 VV93_RS17865 b3f271b2ad43e55be1e4899a25d34be5 71 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 13 70 5.4E-20 T 23-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS17865 b3f271b2ad43e55be1e4899a25d34be5 71 PANTHER PTHR21015 8 71 1.2E-19 T 23-04-2016 VV93_RS17865 b3f271b2ad43e55be1e4899a25d34be5 71 PANTHER PTHR21015:SF22 8 71 1.2E-19 T 23-04-2016 VV93_RS17865 b3f271b2ad43e55be1e4899a25d34be5 71 Gene3D G3DSA:3.40.50.2000 6 71 2.7E-25 T 23-04-2016 VV93_RS13740 f82f1b7244772135ce84bbaecdac5118 139 PIRSF PIRSF004681 1 139 7.9E-48 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 VV93_RS13740 f82f1b7244772135ce84bbaecdac5118 139 PANTHER PTHR30615 1 139 3.2E-80 T 23-04-2016 VV93_RS13740 f82f1b7244772135ce84bbaecdac5118 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 139 6.2E-47 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 VV93_RS13740 f82f1b7244772135ce84bbaecdac5118 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 4.4E-40 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 VV93_RS13740 f82f1b7244772135ce84bbaecdac5118 139 Gene3D G3DSA:2.60.120.460 1 139 5.9E-60 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 VV93_RS13740 f82f1b7244772135ce84bbaecdac5118 139 SUPERFAMILY SSF111038 1 139 3.14E-51 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 VV93_RS10640 f2a43610d67993f90798cbfdcc87ee44 131 SUPERFAMILY SSF54593 2 127 1.88E-28 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS10640 f2a43610d67993f90798cbfdcc87ee44 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 1.1E-14 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV93_RS10640 f2a43610d67993f90798cbfdcc87ee44 131 Gene3D G3DSA:3.10.180.10 3 128 1.9E-31 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS10640 f2a43610d67993f90798cbfdcc87ee44 131 PANTHER PTHR10374:SF8 3 129 5.3E-30 T 23-04-2016 VV93_RS10640 f2a43610d67993f90798cbfdcc87ee44 131 PANTHER PTHR10374 3 129 5.3E-30 T 23-04-2016 VV93_RS14540 6c58e50a74fce5ec497ee719dfd74098 156 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 156 3.2E-62 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VV93_RS14540 6c58e50a74fce5ec497ee719dfd74098 156 Gene3D G3DSA:2.40.50.100 80 156 6.6E-33 T 23-04-2016 VV93_RS14540 6c58e50a74fce5ec497ee719dfd74098 156 Pfam PF00364 Biotin-requiring enzyme 81 155 5.7E-25 T 23-04-2016 IPR000089 Biotin/lipoyl attachment VV93_RS14540 6c58e50a74fce5ec497ee719dfd74098 156 SUPERFAMILY SSF51230 81 156 5.1E-26 T 23-04-2016 IPR011053 Single hybrid motif VV93_RS14540 6c58e50a74fce5ec497ee719dfd74098 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 117 130 7.0E-19 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VV93_RS14540 6c58e50a74fce5ec497ee719dfd74098 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 102 116 7.0E-19 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VV93_RS14540 6c58e50a74fce5ec497ee719dfd74098 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 85 98 7.0E-19 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VV93_RS14540 6c58e50a74fce5ec497ee719dfd74098 156 PANTHER PTHR23151 1 156 3.0E-53 T 23-04-2016 VV93_RS14540 6c58e50a74fce5ec497ee719dfd74098 156 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 112 129 - T 23-04-2016 IPR001882 Biotin-binding site VV93_RS05840 4ca7747099d9e7e3cf21c92280c56c78 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 63 5.9E-16 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VV93_RS05840 4ca7747099d9e7e3cf21c92280c56c78 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 330 5.5E-128 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 VV93_RS05840 4ca7747099d9e7e3cf21c92280c56c78 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 39.519 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 VV93_RS05840 4ca7747099d9e7e3cf21c92280c56c78 332 Gene3D G3DSA:3.40.1030.10 71 330 4.2E-102 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VV93_RS05840 4ca7747099d9e7e3cf21c92280c56c78 332 PANTHER PTHR11922:SF5 67 330 1.7E-103 T 23-04-2016 VV93_RS05840 4ca7747099d9e7e3cf21c92280c56c78 332 PANTHER PTHR11922:SF5 24 41 1.7E-103 T 23-04-2016 VV93_RS05840 4ca7747099d9e7e3cf21c92280c56c78 332 SUPERFAMILY SSF52418 70 329 1.24E-93 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VV93_RS05840 4ca7747099d9e7e3cf21c92280c56c78 332 SUPERFAMILY SSF47648 2 67 5.76E-18 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VV93_RS05840 4ca7747099d9e7e3cf21c92280c56c78 332 Pfam PF00591 Glycosyl transferase family, a/b domain 72 322 1.6E-103 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VV93_RS05840 4ca7747099d9e7e3cf21c92280c56c78 332 PANTHER PTHR11922 67 330 1.7E-103 T 23-04-2016 VV93_RS05840 4ca7747099d9e7e3cf21c92280c56c78 332 PANTHER PTHR11922 24 41 1.7E-103 T 23-04-2016 VV93_RS05840 4ca7747099d9e7e3cf21c92280c56c78 332 Gene3D G3DSA:1.20.970.10 3 68 9.5E-27 T 23-04-2016 VV93_RS15215 e31540dde49f246c735e61da66b4f2e4 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 3.8E-36 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VV93_RS15215 e31540dde49f246c735e61da66b4f2e4 156 Gene3D G3DSA:1.20.5.620 63 122 4.5E-24 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain VV93_RS15215 e31540dde49f246c735e61da66b4f2e4 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 4.9E-59 T 23-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 VV93_RS15215 e31540dde49f246c735e61da66b4f2e4 156 SUPERFAMILY SSF81573 63 121 1.57E-14 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain VV93_RS15215 e31540dde49f246c735e61da66b4f2e4 156 PANTHER PTHR33445 1 156 2.9E-47 T 23-04-2016 VV93_RS15215 e31540dde49f246c735e61da66b4f2e4 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 13.182 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VV93_RS07545 37bf9a8acca06419b705807ba27f91ed 381 PANTHER PTHR30294:SF2 1 381 1.1E-142 T 23-04-2016 VV93_RS07545 37bf9a8acca06419b705807ba27f91ed 381 Pfam PF12698 ABC-2 family transporter protein 22 367 5.7E-39 T 23-04-2016 VV93_RS07545 37bf9a8acca06419b705807ba27f91ed 381 PANTHER PTHR30294 1 381 1.1E-142 T 23-04-2016 VV93_RS10820 d7f11cca6785c2b3cb31de059e78a18d 154 SMART SM00855 2 116 4.7E-6 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VV93_RS10820 d7f11cca6785c2b3cb31de059e78a18d 154 SUPERFAMILY SSF53254 1 144 4.71E-22 T 23-04-2016 IPR029033 Histidine phosphatase superfamily VV93_RS10820 d7f11cca6785c2b3cb31de059e78a18d 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 77 1.2E-8 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VV93_RS10820 d7f11cca6785c2b3cb31de059e78a18d 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 152 6.7E-34 T 23-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- VV93_RS10820 d7f11cca6785c2b3cb31de059e78a18d 154 Gene3D G3DSA:3.40.50.1240 1 147 7.6E-38 T 23-04-2016 IPR029033 Histidine phosphatase superfamily VV93_RS05675 e7b19a6c44c97a3140f27fc74a1ef45b 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 5 136 5.2E-68 T 23-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 VV93_RS05675 e7b19a6c44c97a3140f27fc74a1ef45b 138 Gene3D G3DSA:3.10.180.10 5 131 8.7E-47 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS05675 e7b19a6c44c97a3140f27fc74a1ef45b 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 23-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 VV93_RS05675 e7b19a6c44c97a3140f27fc74a1ef45b 138 SUPERFAMILY SSF54593 3 130 6.04E-36 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS05675 e7b19a6c44c97a3140f27fc74a1ef45b 138 PANTHER PTHR10374 1 134 2.2E-61 T 23-04-2016 VV93_RS05675 e7b19a6c44c97a3140f27fc74a1ef45b 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 1.1E-22 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV93_RS04800 91ab72c7764e85b906aef2f58bebeb9f 378 PANTHER PTHR11113:SF7 1 374 1.8E-169 T 23-04-2016 VV93_RS04800 91ab72c7764e85b906aef2f58bebeb9f 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 2.3E-156 T 23-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 VV93_RS04800 91ab72c7764e85b906aef2f58bebeb9f 378 Pfam PF01979 Amidohydrolase family 51 374 3.0E-41 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 VV93_RS04800 91ab72c7764e85b906aef2f58bebeb9f 378 Gene3D G3DSA:3.20.20.140 55 345 9.3E-101 T 23-04-2016 VV93_RS04800 91ab72c7764e85b906aef2f58bebeb9f 378 SUPERFAMILY SSF51556 54 347 3.66E-102 T 23-04-2016 IPR032466 Metal-dependent hydrolase VV93_RS04800 91ab72c7764e85b906aef2f58bebeb9f 378 PANTHER PTHR11113 1 374 1.8E-169 T 23-04-2016 VV93_RS04800 91ab72c7764e85b906aef2f58bebeb9f 378 PIRSF PIRSF038994 1 378 4.2E-123 T 23-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 VV93_RS04800 91ab72c7764e85b906aef2f58bebeb9f 378 Gene3D G3DSA:2.30.40.10 347 363 1.1E-9 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VV93_RS04800 91ab72c7764e85b906aef2f58bebeb9f 378 Gene3D G3DSA:2.30.40.10 2 54 1.1E-9 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VV93_RS04800 91ab72c7764e85b906aef2f58bebeb9f 378 SUPERFAMILY SSF51338 1 53 7.83E-19 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VV93_RS00710 26153a50fda7fbae5203448f89085482 68 SMART SM00530 11 66 4.9E-14 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV93_RS00710 26153a50fda7fbae5203448f89085482 68 Pfam PF01381 Helix-turn-helix 12 66 3.1E-14 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV93_RS00710 26153a50fda7fbae5203448f89085482 68 PANTHER PTHR10245 2 67 2.1E-13 T 23-04-2016 VV93_RS00710 26153a50fda7fbae5203448f89085482 68 SUPERFAMILY SSF47413 3 67 6.19E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS00710 26153a50fda7fbae5203448f89085482 68 Gene3D G3DSA:1.10.260.40 1 67 9.9E-21 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS12135 550629162594135fc3b308e52e639d03 133 PIRSF PIRSF029225 2 133 7.2E-49 T 23-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS12135 550629162594135fc3b308e52e639d03 133 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 36 129 4.0E-5 T 23-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS12135 550629162594135fc3b308e52e639d03 133 Gene3D G3DSA:3.40.50.10220 31 133 1.0E-34 T 23-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS12135 550629162594135fc3b308e52e639d03 133 Pfam PF03603 DNA polymerase III psi subunit 3 130 1.8E-36 T 23-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS12135 550629162594135fc3b308e52e639d03 133 SUPERFAMILY SSF102220 30 133 4.45E-31 T 23-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS23060 e74d0f041183cc0ccb39cc9626ead9ec 114 PANTHER PTHR11907 1 112 8.8E-35 T 23-04-2016 VV93_RS23060 e74d0f041183cc0ccb39cc9626ead9ec 114 PANTHER PTHR11907:SF9 1 112 8.8E-35 T 23-04-2016 VV93_RS23060 e74d0f041183cc0ccb39cc9626ead9ec 114 Pfam PF00156 Phosphoribosyl transferase domain 16 112 1.9E-11 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VV93_RS23060 e74d0f041183cc0ccb39cc9626ead9ec 114 Gene3D G3DSA:3.40.50.2020 9 112 1.3E-25 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like VV93_RS23060 e74d0f041183cc0ccb39cc9626ead9ec 114 SUPERFAMILY SSF53271 2 113 2.88E-24 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like VV93_RS01180 846b7357515965177ab1c139ac6f0711 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.9 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS01180 846b7357515965177ab1c139ac6f0711 90 Pfam PF01192 RNA polymerase Rpb6 10 60 3.1E-18 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS01180 846b7357515965177ab1c139ac6f0711 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.8E-29 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS01180 846b7357515965177ab1c139ac6f0711 90 PANTHER PTHR34476 2 90 4.1E-29 T 23-04-2016 VV93_RS01180 846b7357515965177ab1c139ac6f0711 90 SMART SM01409 8 61 1.3E-16 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS01180 846b7357515965177ab1c139ac6f0711 90 Gene3D G3DSA:3.90.940.10 1 77 4.9E-17 T 23-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS01180 846b7357515965177ab1c139ac6f0711 90 SUPERFAMILY SSF63562 1 78 7.85E-26 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS10510 e79727058d01229bbbfd34622b6c0813 291 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 30 283 2.4E-106 T 23-04-2016 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896|UniPathway: UPA00060 VV93_RS10510 e79727058d01229bbbfd34622b6c0813 291 Pfam PF01636 Phosphotransferase enzyme family 30 216 5.2E-11 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase VV93_RS10510 e79727058d01229bbbfd34622b6c0813 291 Gene3D G3DSA:3.90.1200.10 83 280 6.6E-15 T 23-04-2016 VV93_RS10510 e79727058d01229bbbfd34622b6c0813 291 SUPERFAMILY SSF56112 26 269 4.81E-34 T 23-04-2016 IPR011009 Protein kinase-like domain VV93_RS05450 6a1ddf1fb440234e4c48a772641d851e 583 Pfam PF07969 Amidohydrolase family 86 578 4.2E-119 T 23-04-2016 IPR013108 Amidohydrolase 3 VV93_RS05450 6a1ddf1fb440234e4c48a772641d851e 583 SUPERFAMILY SSF51338 537 578 1.82E-17 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VV93_RS05450 6a1ddf1fb440234e4c48a772641d851e 583 SUPERFAMILY SSF51338 35 98 1.82E-17 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VV93_RS05450 6a1ddf1fb440234e4c48a772641d851e 583 PANTHER PTHR22642:SF2 26 580 7.5E-137 T 23-04-2016 VV93_RS05450 6a1ddf1fb440234e4c48a772641d851e 583 Gene3D G3DSA:3.20.20.140 247 528 1.0E-21 T 23-04-2016 VV93_RS05450 6a1ddf1fb440234e4c48a772641d851e 583 Gene3D G3DSA:3.20.20.140 100 117 1.0E-21 T 23-04-2016 VV93_RS05450 6a1ddf1fb440234e4c48a772641d851e 583 Gene3D G3DSA:2.30.40.10 537 580 1.9E-22 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VV93_RS05450 6a1ddf1fb440234e4c48a772641d851e 583 Gene3D G3DSA:2.30.40.10 37 99 1.9E-22 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VV93_RS05450 6a1ddf1fb440234e4c48a772641d851e 583 PANTHER PTHR22642 26 580 7.5E-137 T 23-04-2016 VV93_RS05450 6a1ddf1fb440234e4c48a772641d851e 583 SUPERFAMILY SSF51556 97 118 7.46E-26 T 23-04-2016 IPR032466 Metal-dependent hydrolase VV93_RS05450 6a1ddf1fb440234e4c48a772641d851e 583 SUPERFAMILY SSF51556 236 331 7.46E-26 T 23-04-2016 IPR032466 Metal-dependent hydrolase VV93_RS05450 6a1ddf1fb440234e4c48a772641d851e 583 SUPERFAMILY SSF51556 359 538 7.46E-26 T 23-04-2016 IPR032466 Metal-dependent hydrolase VV93_RS03770 b67b144ca836a879162f4d323d650033 66 SUPERFAMILY SSF46955 2 55 2.38E-5 T 23-04-2016 IPR009061 Putative DNA-binding domain VV93_RS03770 b67b144ca836a879162f4d323d650033 66 PANTHER PTHR36154 1 66 1.5E-22 T 23-04-2016 VV93_RS03770 b67b144ca836a879162f4d323d650033 66 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 52 7.2E-26 T 23-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) VV93_RS09295 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:3.30.420.10 163 306 1.4E-14 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS09295 a761591dbb59338c82985ce2a71be398 310 ProSitePatterns PS01043 Transposases, IS30 family, signature. 254 270 - T 23-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV93_RS09295 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:1.10.10.60 2 31 2.3E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS09295 a761591dbb59338c82985ce2a71be398 310 PANTHER PTHR10948 1 306 2.7E-74 T 23-04-2016 VV93_RS09295 a761591dbb59338c82985ce2a71be398 310 Pfam PF13936 Helix-turn-helix domain 1 33 2.2E-10 T 23-04-2016 IPR025246 Transposase IS30-like HTH domain VV93_RS09295 a761591dbb59338c82985ce2a71be398 310 Pfam PF00665 Integrase core domain 160 267 5.9E-13 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VV93_RS09295 a761591dbb59338c82985ce2a71be398 310 SUPERFAMILY SSF53098 163 307 1.52E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08500 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:3.30.420.10 163 306 1.4E-14 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08500 a761591dbb59338c82985ce2a71be398 310 ProSitePatterns PS01043 Transposases, IS30 family, signature. 254 270 - T 23-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV93_RS08500 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:1.10.10.60 2 31 2.3E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS08500 a761591dbb59338c82985ce2a71be398 310 PANTHER PTHR10948 1 306 2.7E-74 T 23-04-2016 VV93_RS08500 a761591dbb59338c82985ce2a71be398 310 Pfam PF13936 Helix-turn-helix domain 1 33 2.2E-10 T 23-04-2016 IPR025246 Transposase IS30-like HTH domain VV93_RS08500 a761591dbb59338c82985ce2a71be398 310 Pfam PF00665 Integrase core domain 160 267 5.9E-13 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VV93_RS08500 a761591dbb59338c82985ce2a71be398 310 SUPERFAMILY SSF53098 163 307 1.52E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08555 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:3.30.420.10 163 306 1.4E-14 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08555 a761591dbb59338c82985ce2a71be398 310 ProSitePatterns PS01043 Transposases, IS30 family, signature. 254 270 - T 23-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV93_RS08555 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:1.10.10.60 2 31 2.3E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS08555 a761591dbb59338c82985ce2a71be398 310 PANTHER PTHR10948 1 306 2.7E-74 T 23-04-2016 VV93_RS08555 a761591dbb59338c82985ce2a71be398 310 Pfam PF13936 Helix-turn-helix domain 1 33 2.2E-10 T 23-04-2016 IPR025246 Transposase IS30-like HTH domain VV93_RS08555 a761591dbb59338c82985ce2a71be398 310 Pfam PF00665 Integrase core domain 160 267 5.9E-13 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VV93_RS08555 a761591dbb59338c82985ce2a71be398 310 SUPERFAMILY SSF53098 163 307 1.52E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08470 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:3.30.420.10 163 306 1.4E-14 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08470 a761591dbb59338c82985ce2a71be398 310 ProSitePatterns PS01043 Transposases, IS30 family, signature. 254 270 - T 23-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV93_RS08470 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:1.10.10.60 2 31 2.3E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS08470 a761591dbb59338c82985ce2a71be398 310 PANTHER PTHR10948 1 306 2.7E-74 T 23-04-2016 VV93_RS08470 a761591dbb59338c82985ce2a71be398 310 Pfam PF13936 Helix-turn-helix domain 1 33 2.2E-10 T 23-04-2016 IPR025246 Transposase IS30-like HTH domain VV93_RS08470 a761591dbb59338c82985ce2a71be398 310 Pfam PF00665 Integrase core domain 160 267 5.9E-13 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VV93_RS08470 a761591dbb59338c82985ce2a71be398 310 SUPERFAMILY SSF53098 163 307 1.52E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08565 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:3.30.420.10 163 306 1.4E-14 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08565 a761591dbb59338c82985ce2a71be398 310 ProSitePatterns PS01043 Transposases, IS30 family, signature. 254 270 - T 23-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV93_RS08565 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:1.10.10.60 2 31 2.3E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS08565 a761591dbb59338c82985ce2a71be398 310 PANTHER PTHR10948 1 306 2.7E-74 T 23-04-2016 VV93_RS08565 a761591dbb59338c82985ce2a71be398 310 Pfam PF13936 Helix-turn-helix domain 1 33 2.2E-10 T 23-04-2016 IPR025246 Transposase IS30-like HTH domain VV93_RS08565 a761591dbb59338c82985ce2a71be398 310 Pfam PF00665 Integrase core domain 160 267 5.9E-13 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VV93_RS08565 a761591dbb59338c82985ce2a71be398 310 SUPERFAMILY SSF53098 163 307 1.52E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08525 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:3.30.420.10 163 306 1.4E-14 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08525 a761591dbb59338c82985ce2a71be398 310 ProSitePatterns PS01043 Transposases, IS30 family, signature. 254 270 - T 23-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV93_RS08525 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:1.10.10.60 2 31 2.3E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS08525 a761591dbb59338c82985ce2a71be398 310 PANTHER PTHR10948 1 306 2.7E-74 T 23-04-2016 VV93_RS08525 a761591dbb59338c82985ce2a71be398 310 Pfam PF13936 Helix-turn-helix domain 1 33 2.2E-10 T 23-04-2016 IPR025246 Transposase IS30-like HTH domain VV93_RS08525 a761591dbb59338c82985ce2a71be398 310 Pfam PF00665 Integrase core domain 160 267 5.9E-13 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VV93_RS08525 a761591dbb59338c82985ce2a71be398 310 SUPERFAMILY SSF53098 163 307 1.52E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08390 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:3.30.420.10 163 306 1.4E-14 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08390 a761591dbb59338c82985ce2a71be398 310 ProSitePatterns PS01043 Transposases, IS30 family, signature. 254 270 - T 23-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV93_RS08390 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:1.10.10.60 2 31 2.3E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS08390 a761591dbb59338c82985ce2a71be398 310 PANTHER PTHR10948 1 306 2.7E-74 T 23-04-2016 VV93_RS08390 a761591dbb59338c82985ce2a71be398 310 Pfam PF13936 Helix-turn-helix domain 1 33 2.2E-10 T 23-04-2016 IPR025246 Transposase IS30-like HTH domain VV93_RS08390 a761591dbb59338c82985ce2a71be398 310 Pfam PF00665 Integrase core domain 160 267 5.9E-13 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VV93_RS08390 a761591dbb59338c82985ce2a71be398 310 SUPERFAMILY SSF53098 163 307 1.52E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08625 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:3.30.420.10 163 306 1.4E-14 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08625 a761591dbb59338c82985ce2a71be398 310 ProSitePatterns PS01043 Transposases, IS30 family, signature. 254 270 - T 23-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV93_RS08625 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:1.10.10.60 2 31 2.3E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS08625 a761591dbb59338c82985ce2a71be398 310 PANTHER PTHR10948 1 306 2.7E-74 T 23-04-2016 VV93_RS08625 a761591dbb59338c82985ce2a71be398 310 Pfam PF13936 Helix-turn-helix domain 1 33 2.2E-10 T 23-04-2016 IPR025246 Transposase IS30-like HTH domain VV93_RS08625 a761591dbb59338c82985ce2a71be398 310 Pfam PF00665 Integrase core domain 160 267 5.9E-13 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VV93_RS08625 a761591dbb59338c82985ce2a71be398 310 SUPERFAMILY SSF53098 163 307 1.52E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS09815 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:3.30.420.10 163 306 1.4E-14 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS09815 a761591dbb59338c82985ce2a71be398 310 ProSitePatterns PS01043 Transposases, IS30 family, signature. 254 270 - T 23-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV93_RS09815 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:1.10.10.60 2 31 2.3E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS09815 a761591dbb59338c82985ce2a71be398 310 PANTHER PTHR10948 1 306 2.7E-74 T 23-04-2016 VV93_RS09815 a761591dbb59338c82985ce2a71be398 310 Pfam PF13936 Helix-turn-helix domain 1 33 2.2E-10 T 23-04-2016 IPR025246 Transposase IS30-like HTH domain VV93_RS09815 a761591dbb59338c82985ce2a71be398 310 Pfam PF00665 Integrase core domain 160 267 5.9E-13 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VV93_RS09815 a761591dbb59338c82985ce2a71be398 310 SUPERFAMILY SSF53098 163 307 1.52E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08595 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:3.30.420.10 163 306 1.4E-14 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08595 a761591dbb59338c82985ce2a71be398 310 ProSitePatterns PS01043 Transposases, IS30 family, signature. 254 270 - T 23-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV93_RS08595 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:1.10.10.60 2 31 2.3E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS08595 a761591dbb59338c82985ce2a71be398 310 PANTHER PTHR10948 1 306 2.7E-74 T 23-04-2016 VV93_RS08595 a761591dbb59338c82985ce2a71be398 310 Pfam PF13936 Helix-turn-helix domain 1 33 2.2E-10 T 23-04-2016 IPR025246 Transposase IS30-like HTH domain VV93_RS08595 a761591dbb59338c82985ce2a71be398 310 Pfam PF00665 Integrase core domain 160 267 5.9E-13 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VV93_RS08595 a761591dbb59338c82985ce2a71be398 310 SUPERFAMILY SSF53098 163 307 1.52E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08425 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:3.30.420.10 163 306 1.4E-14 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08425 a761591dbb59338c82985ce2a71be398 310 ProSitePatterns PS01043 Transposases, IS30 family, signature. 254 270 - T 23-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV93_RS08425 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:1.10.10.60 2 31 2.3E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS08425 a761591dbb59338c82985ce2a71be398 310 PANTHER PTHR10948 1 306 2.7E-74 T 23-04-2016 VV93_RS08425 a761591dbb59338c82985ce2a71be398 310 Pfam PF13936 Helix-turn-helix domain 1 33 2.2E-10 T 23-04-2016 IPR025246 Transposase IS30-like HTH domain VV93_RS08425 a761591dbb59338c82985ce2a71be398 310 Pfam PF00665 Integrase core domain 160 267 5.9E-13 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VV93_RS08425 a761591dbb59338c82985ce2a71be398 310 SUPERFAMILY SSF53098 163 307 1.52E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS11580 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:3.30.420.10 163 306 1.4E-14 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS11580 a761591dbb59338c82985ce2a71be398 310 ProSitePatterns PS01043 Transposases, IS30 family, signature. 254 270 - T 23-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV93_RS11580 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:1.10.10.60 2 31 2.3E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS11580 a761591dbb59338c82985ce2a71be398 310 PANTHER PTHR10948 1 306 2.7E-74 T 23-04-2016 VV93_RS11580 a761591dbb59338c82985ce2a71be398 310 Pfam PF13936 Helix-turn-helix domain 1 33 2.2E-10 T 23-04-2016 IPR025246 Transposase IS30-like HTH domain VV93_RS11580 a761591dbb59338c82985ce2a71be398 310 Pfam PF00665 Integrase core domain 160 267 5.9E-13 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VV93_RS11580 a761591dbb59338c82985ce2a71be398 310 SUPERFAMILY SSF53098 163 307 1.52E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08330 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:3.30.420.10 163 306 1.4E-14 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08330 a761591dbb59338c82985ce2a71be398 310 ProSitePatterns PS01043 Transposases, IS30 family, signature. 254 270 - T 23-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV93_RS08330 a761591dbb59338c82985ce2a71be398 310 Gene3D G3DSA:1.10.10.60 2 31 2.3E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS08330 a761591dbb59338c82985ce2a71be398 310 PANTHER PTHR10948 1 306 2.7E-74 T 23-04-2016 VV93_RS08330 a761591dbb59338c82985ce2a71be398 310 Pfam PF13936 Helix-turn-helix domain 1 33 2.2E-10 T 23-04-2016 IPR025246 Transposase IS30-like HTH domain VV93_RS08330 a761591dbb59338c82985ce2a71be398 310 Pfam PF00665 Integrase core domain 160 267 5.9E-13 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VV93_RS08330 a761591dbb59338c82985ce2a71be398 310 SUPERFAMILY SSF53098 163 307 1.52E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS04000 79202ac11e3c0feaffcd04c755803f87 352 PANTHER PTHR37326 9 337 1.7E-117 T 23-04-2016 VV93_RS04000 79202ac11e3c0feaffcd04c755803f87 352 SUPERFAMILY SSF53187 20 318 4.3E-76 T 23-04-2016 VV93_RS04000 79202ac11e3c0feaffcd04c755803f87 352 PIRSF PIRSF039012 4 325 1.1E-90 T 23-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 VV93_RS04000 79202ac11e3c0feaffcd04c755803f87 352 Gene3D G3DSA:3.40.630.10 33 232 9.2E-26 T 23-04-2016 VV93_RS04000 79202ac11e3c0feaffcd04c755803f87 352 Gene3D G3DSA:2.40.50.100 252 315 3.4E-4 T 23-04-2016 VV93_RS04000 79202ac11e3c0feaffcd04c755803f87 352 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 317 7.5E-72 T 23-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 VV93_RS04000 79202ac11e3c0feaffcd04c755803f87 352 PANTHER PTHR37326:SF1 9 337 1.7E-117 T 23-04-2016 VV93_RS09740 7b84fa135be5f9300db27e02a3285dc7 238 SMART SM01134 73 233 3.4E-52 T 23-04-2016 VV93_RS09740 7b84fa135be5f9300db27e02a3285dc7 238 PANTHER PTHR30363 1 235 5.0E-64 T 23-04-2016 VV93_RS09740 7b84fa135be5f9300db27e02a3285dc7 238 SUPERFAMILY SSF100950 76 233 2.3E-24 T 23-04-2016 VV93_RS09740 7b84fa135be5f9300db27e02a3285dc7 238 Gene3D G3DSA:3.40.50.1360 82 215 6.0E-7 T 23-04-2016 VV93_RS09740 7b84fa135be5f9300db27e02a3285dc7 238 Gene3D G3DSA:1.10.10.10 10 57 1.5E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS09740 7b84fa135be5f9300db27e02a3285dc7 238 SUPERFAMILY SSF46785 5 60 6.62E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS09740 7b84fa135be5f9300db27e02a3285dc7 238 SMART SM00420 6 58 3.8E-15 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS09740 7b84fa135be5f9300db27e02a3285dc7 238 PANTHER PTHR30363:SF15 1 235 5.0E-64 T 23-04-2016 VV93_RS09740 7b84fa135be5f9300db27e02a3285dc7 238 Pfam PF00455 DeoR C terminal sensor domain 75 230 1.5E-40 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain VV93_RS09740 7b84fa135be5f9300db27e02a3285dc7 238 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.4E-9 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS09740 7b84fa135be5f9300db27e02a3285dc7 238 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.4E-9 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS09740 7b84fa135be5f9300db27e02a3285dc7 238 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 4.4E-16 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS09740 7b84fa135be5f9300db27e02a3285dc7 238 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VV93_RS10035 2251775bb7dbf11d8f7d9156b16db85a 260 PANTHER PTHR26312:SF74 155 260 2.1E-14 T 23-04-2016 VV93_RS10035 2251775bb7dbf11d8f7d9156b16db85a 260 Pfam PF07719 Tetratricopeptide repeat 217 249 1.2E-5 T 23-04-2016 IPR013105 Tetratricopeptide repeat 2 VV93_RS10035 2251775bb7dbf11d8f7d9156b16db85a 260 SUPERFAMILY SSF48452 143 256 4.38E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS10035 2251775bb7dbf11d8f7d9156b16db85a 260 SMART SM00028 217 250 0.0034 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS10035 2251775bb7dbf11d8f7d9156b16db85a 260 SMART SM00028 181 214 33.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS10035 2251775bb7dbf11d8f7d9156b16db85a 260 Pfam PF13432 Tetratricopeptide repeat 155 207 1.1E-8 T 23-04-2016 VV93_RS10035 2251775bb7dbf11d8f7d9156b16db85a 260 Pfam PF16331 TolA binding protein trimerisation 50 118 1.8E-24 T 23-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 VV93_RS10035 2251775bb7dbf11d8f7d9156b16db85a 260 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 144 260 1.8E-35 T 23-04-2016 IPR014162 Tol-Pal system, YbgF VV93_RS10035 2251775bb7dbf11d8f7d9156b16db85a 260 Gene3D G3DSA:1.25.40.10 146 254 1.2E-17 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS10035 2251775bb7dbf11d8f7d9156b16db85a 260 Gene3D G3DSA:1.25.40.10 78 95 1.2E-17 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS10035 2251775bb7dbf11d8f7d9156b16db85a 260 PANTHER PTHR26312 155 260 2.1E-14 T 23-04-2016 VV93_RS05750 f67dc53443c6134e35583f79e95bc03c 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.017 T 23-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 VV93_RS05750 f67dc53443c6134e35583f79e95bc03c 159 PANTHER PTHR22960 1 158 1.1E-108 T 23-04-2016 VV93_RS05750 f67dc53443c6134e35583f79e95bc03c 159 SUPERFAMILY SSF55040 11 155 3.4E-61 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 VV93_RS05750 f67dc53443c6134e35583f79e95bc03c 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 5.0E-72 T 23-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 VV93_RS05750 f67dc53443c6134e35583f79e95bc03c 159 Pfam PF01967 MoaC family 15 150 2.1E-55 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 VV93_RS05750 f67dc53443c6134e35583f79e95bc03c 159 Gene3D G3DSA:3.30.70.640 3 158 9.6E-70 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 VV93_RS05195 7498ae817607e3a6903ffee4f47397e9 478 PANTHER PTHR24423 215 473 6.0E-42 T 23-04-2016 VV93_RS05195 7498ae817607e3a6903ffee4f47397e9 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 473 1.4E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS05195 7498ae817607e3a6903ffee4f47397e9 478 SMART SM00387 371 476 2.5E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS05195 7498ae817607e3a6903ffee4f47397e9 478 SUPERFAMILY SSF47384 258 322 1.47E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS05195 7498ae817607e3a6903ffee4f47397e9 478 Gene3D G3DSA:1.10.287.130 264 325 2.0E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS05195 7498ae817607e3a6903ffee4f47397e9 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 3.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS05195 7498ae817607e3a6903ffee4f47397e9 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 3.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS05195 7498ae817607e3a6903ffee4f47397e9 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 3.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS05195 7498ae817607e3a6903ffee4f47397e9 478 Gene3D G3DSA:3.30.565.10 339 473 1.1E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS05195 7498ae817607e3a6903ffee4f47397e9 478 SUPERFAMILY SSF55874 333 474 2.36E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS05195 7498ae817607e3a6903ffee4f47397e9 478 PANTHER PTHR24423:SF533 215 473 6.0E-42 T 23-04-2016 VV93_RS05195 7498ae817607e3a6903ffee4f47397e9 478 SMART SM00304 221 273 2.0E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS05195 7498ae817607e3a6903ffee4f47397e9 478 Pfam PF00672 HAMP domain 204 270 2.3E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS04900 2d18228f54f593bc4b03cce3d413cd04 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV93_RS04900 2d18228f54f593bc4b03cce3d413cd04 236 SUPERFAMILY SSF46548 105 233 8.72E-40 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VV93_RS04900 2d18228f54f593bc4b03cce3d413cd04 236 PANTHER PTHR11921 4 234 1.5E-126 T 23-04-2016 VV93_RS04900 2d18228f54f593bc4b03cce3d413cd04 236 Gene3D G3DSA:1.10.1060.10 105 234 9.8E-46 T 23-04-2016 VV93_RS04900 2d18228f54f593bc4b03cce3d413cd04 236 SUPERFAMILY SSF54292 1 104 1.78E-29 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VV93_RS04900 2d18228f54f593bc4b03cce3d413cd04 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 2.7E-10 T 23-04-2016 VV93_RS04900 2d18228f54f593bc4b03cce3d413cd04 236 PANTHER PTHR11921:SF29 4 234 1.5E-126 T 23-04-2016 VV93_RS04900 2d18228f54f593bc4b03cce3d413cd04 236 Gene3D G3DSA:3.10.20.30 1 104 3.3E-36 T 23-04-2016 IPR012675 Beta-grasp domain VV93_RS04900 2d18228f54f593bc4b03cce3d413cd04 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 5.0E-30 T 23-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VV93_RS04900 2d18228f54f593bc4b03cce3d413cd04 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 228 2.8E-85 T 23-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VV93_RS05990 69441c058204de3752a5ebe1a6a189c9 760 SUPERFAMILY SSF48168 10 221 9.29E-75 T 23-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VV93_RS05990 69441c058204de3752a5ebe1a6a189c9 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 4.5E-173 T 23-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VV93_RS05990 69441c058204de3752a5ebe1a6a189c9 760 SUPERFAMILY SSF51998 222 739 1.8E-164 T 23-04-2016 VV93_RS05990 69441c058204de3752a5ebe1a6a189c9 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV93_RS05990 69441c058204de3752a5ebe1a6a189c9 760 Pfam PF03477 ATP cone domain 6 92 1.7E-18 T 23-04-2016 IPR005144 ATP-cone domain VV93_RS05990 69441c058204de3752a5ebe1a6a189c9 760 Gene3D G3DSA:3.20.70.20 130 344 5.7E-43 T 23-04-2016 VV93_RS05990 69441c058204de3752a5ebe1a6a189c9 760 Gene3D G3DSA:3.20.70.20 610 700 5.7E-43 T 23-04-2016 VV93_RS05990 69441c058204de3752a5ebe1a6a189c9 760 Gene3D G3DSA:3.20.70.20 398 559 5.7E-43 T 23-04-2016 VV93_RS05990 69441c058204de3752a5ebe1a6a189c9 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 664 1.4E-113 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV93_RS05990 69441c058204de3752a5ebe1a6a189c9 760 PANTHER PTHR11573 6 752 0.0 T 23-04-2016 VV93_RS05990 69441c058204de3752a5ebe1a6a189c9 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 4.2E-39 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV93_RS05990 69441c058204de3752a5ebe1a6a189c9 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 4.2E-39 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV93_RS05990 69441c058204de3752a5ebe1a6a189c9 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 4.2E-39 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV93_RS05990 69441c058204de3752a5ebe1a6a189c9 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 4.2E-39 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV93_RS05990 69441c058204de3752a5ebe1a6a189c9 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 4.2E-39 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV93_RS05990 69441c058204de3752a5ebe1a6a189c9 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 4.2E-39 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV93_RS05990 69441c058204de3752a5ebe1a6a189c9 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 1.8E-11 T 23-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VV93_RS05990 69441c058204de3752a5ebe1a6a189c9 760 PANTHER PTHR11573:SF17 6 752 0.0 T 23-04-2016 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.002 T 23-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 2.2E-25 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 PANTHER PTHR11451 4 244 9.5E-150 T 23-04-2016 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 PANTHER PTHR11451 399 571 9.5E-150 T 23-04-2016 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.6E-16 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.6E-16 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.6E-16 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.6E-16 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 5.8E-41 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 SUPERFAMILY SSF55681 407 478 5.9E-97 T 23-04-2016 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 SUPERFAMILY SSF55681 10 237 5.9E-97 T 23-04-2016 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 PIRSF PIRSF001535 1 571 2.2E-266 T 23-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 Pfam PF03129 Anticodon binding domain 475 568 6.1E-23 T 23-04-2016 IPR004154 Anticodon-binding VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 SUPERFAMILY SSF55826 218 390 1.28E-30 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 PANTHER PTHR11451:SF3 4 244 9.5E-150 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 PANTHER PTHR11451:SF3 399 571 9.5E-150 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 Gene3D G3DSA:3.30.930.10 389 472 2.5E-99 T 23-04-2016 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 Gene3D G3DSA:3.30.930.10 10 234 2.5E-99 T 23-04-2016 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 Gene3D G3DSA:3.40.50.800 473 571 3.4E-34 T 23-04-2016 IPR004154 Anticodon-binding VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 569 1.8E-245 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 Gene3D G3DSA:3.90.960.10 251 388 2.5E-32 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VV93_RS11555 21c2cb852a67fbcf416256720349d9d7 571 SUPERFAMILY SSF52954 463 570 8.61E-34 T 23-04-2016 IPR004154 Anticodon-binding VV93_RS22050 d9d3fea19acd5fa39b9e792ae6c81508 96 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 1 95 2.9E-37 T 23-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane VV93_RS22050 d9d3fea19acd5fa39b9e792ae6c81508 96 PANTHER PTHR35342 1 96 9.1E-61 T 23-04-2016 VV93_RS22050 d9d3fea19acd5fa39b9e792ae6c81508 96 PANTHER PTHR35342:SF2 1 96 9.1E-61 T 23-04-2016 VV93_RS12735 fbee32162a4ff48f2b4224739e18af43 167 Gene3D G3DSA:3.90.950.20 4 161 6.4E-55 T 23-04-2016 IPR008136 CinA, C-terminal VV93_RS12735 fbee32162a4ff48f2b4224739e18af43 167 Pfam PF02464 Competence-damaged protein 6 158 4.4E-56 T 23-04-2016 IPR008136 CinA, C-terminal VV93_RS12735 fbee32162a4ff48f2b4224739e18af43 167 SUPERFAMILY SSF142433 3 160 4.18E-55 T 23-04-2016 IPR008136 CinA, C-terminal VV93_RS12735 fbee32162a4ff48f2b4224739e18af43 167 PANTHER PTHR13939 2 167 5.2E-72 T 23-04-2016 VV93_RS12735 fbee32162a4ff48f2b4224739e18af43 167 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 11 156 5.1E-48 T 23-04-2016 IPR008136 CinA, C-terminal VV93_RS12965 c109c828ce7b4f79658d7c4ac842198a 287 SUPERFAMILY SSF50182 120 185 1.21E-17 T 23-04-2016 IPR010920 LSM domain VV93_RS12965 c109c828ce7b4f79658d7c4ac842198a 287 Gene3D G3DSA:3.30.70.100 189 272 5.4E-32 T 23-04-2016 VV93_RS12965 c109c828ce7b4f79658d7c4ac842198a 287 SUPERFAMILY SSF82861 33 118 6.67E-18 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VV93_RS12965 c109c828ce7b4f79658d7c4ac842198a 287 Gene3D G3DSA:2.30.30.60 135 184 1.4E-19 T 23-04-2016 VV93_RS12965 c109c828ce7b4f79658d7c4ac842198a 287 SUPERFAMILY SSF82689 187 284 1.7E-34 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VV93_RS12965 c109c828ce7b4f79658d7c4ac842198a 287 PANTHER PTHR30221 17 286 3.9E-112 T 23-04-2016 VV93_RS12965 c109c828ce7b4f79658d7c4ac842198a 287 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 23-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VV93_RS12965 c109c828ce7b4f79658d7c4ac842198a 287 Pfam PF00924 Mechanosensitive ion channel 77 274 1.9E-57 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VV93_RS12965 c109c828ce7b4f79658d7c4ac842198a 287 PANTHER PTHR30221:SF7 17 286 3.9E-112 T 23-04-2016 VV93_RS12965 c109c828ce7b4f79658d7c4ac842198a 287 Pfam PF05552 Conserved TM helix 21 69 1.1E-12 T 23-04-2016 IPR008910 Conserved TM helix VV93_RS20850 d162ac2241f57ebb12294bdd126c4f9e 571 SUPERFAMILY SSF52374 160 371 5.36E-94 T 23-04-2016 VV93_RS20850 d162ac2241f57ebb12294bdd126c4f9e 571 SUPERFAMILY SSF52374 1 125 5.36E-94 T 23-04-2016 VV93_RS20850 d162ac2241f57ebb12294bdd126c4f9e 571 PANTHER PTHR11946 1 571 4.0E-225 T 23-04-2016 VV93_RS20850 d162ac2241f57ebb12294bdd126c4f9e 571 Pfam PF09334 tRNA synthetases class I (M) 1 380 6.1E-158 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS20850 d162ac2241f57ebb12294bdd126c4f9e 571 SUPERFAMILY SSF57770 126 160 4.71E-13 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VV93_RS20850 d162ac2241f57ebb12294bdd126c4f9e 571 Gene3D G3DSA:2.20.28.20 129 160 4.4E-20 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VV93_RS20850 d162ac2241f57ebb12294bdd126c4f9e 571 Hamap MF_00098 Methionine--tRNA ligase [metG]. 1 529 38.883 T 23-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VV93_RS20850 d162ac2241f57ebb12294bdd126c4f9e 571 SUPERFAMILY SSF47323 373 531 9.91E-44 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS20850 d162ac2241f57ebb12294bdd126c4f9e 571 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 1 519 1.3E-192 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VV93_RS20850 d162ac2241f57ebb12294bdd126c4f9e 571 PANTHER PTHR11946:SF86 1 571 4.0E-225 T 23-04-2016 VV93_RS20850 d162ac2241f57ebb12294bdd126c4f9e 571 PRINTS PR01041 Methionyl-tRNA synthetase signature 275 290 3.4E-19 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VV93_RS20850 d162ac2241f57ebb12294bdd126c4f9e 571 PRINTS PR01041 Methionyl-tRNA synthetase signature 235 246 3.4E-19 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VV93_RS20850 d162ac2241f57ebb12294bdd126c4f9e 571 PRINTS PR01041 Methionyl-tRNA synthetase signature 368 379 3.4E-19 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VV93_RS20850 d162ac2241f57ebb12294bdd126c4f9e 571 PRINTS PR01041 Methionyl-tRNA synthetase signature 74 85 3.4E-19 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VV93_RS20850 d162ac2241f57ebb12294bdd126c4f9e 571 PRINTS PR01041 Methionyl-tRNA synthetase signature 26 40 3.4E-19 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VV93_RS20850 d162ac2241f57ebb12294bdd126c4f9e 571 Gene3D G3DSA:3.40.50.620 1 128 5.2E-84 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS20850 d162ac2241f57ebb12294bdd126c4f9e 571 Gene3D G3DSA:3.40.50.620 167 363 5.2E-84 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS20850 d162ac2241f57ebb12294bdd126c4f9e 571 Gene3D G3DSA:1.10.730.10 364 518 1.4E-40 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS10990 97031e83330a60d2bf47e06bd584626c 140 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 46 113 1.6E-21 T 23-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VV93_RS10990 97031e83330a60d2bf47e06bd584626c 140 Pfam PF04347 Flagellar biosynthesis protein, FliO 58 136 1.2E-18 T 23-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VV93_RS10990 97031e83330a60d2bf47e06bd584626c 140 PANTHER PTHR38766 7 140 2.6E-24 T 23-04-2016 VV93_RS10990 97031e83330a60d2bf47e06bd584626c 140 PANTHER PTHR38766:SF1 7 140 2.6E-24 T 23-04-2016 VV93_RS05785 79566787fb9a7a75f766020c0f655049 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 327 3.7E-26 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV93_RS05785 79566787fb9a7a75f766020c0f655049 331 Pfam PF00005 ABC transporter 39 190 8.7E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS05785 79566787fb9a7a75f766020c0f655049 331 PANTHER PTHR24220 11 331 9.2E-193 T 23-04-2016 VV93_RS05785 79566787fb9a7a75f766020c0f655049 331 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS05785 79566787fb9a7a75f766020c0f655049 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 309 2.5E-19 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV93_RS05785 79566787fb9a7a75f766020c0f655049 331 SUPERFAMILY SSF52540 10 262 4.46E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05785 79566787fb9a7a75f766020c0f655049 331 SMART SM00382 47 240 3.0E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS05785 79566787fb9a7a75f766020c0f655049 331 Gene3D G3DSA:3.40.50.300 9 264 1.6E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05785 79566787fb9a7a75f766020c0f655049 331 PANTHER PTHR24220:SF544 11 331 9.2E-193 T 23-04-2016 VV93_RS12015 cafc0a948ef51dda7366f3d5174d6739 242 Gene3D G3DSA:1.10.10.60 192 240 1.9E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS12015 cafc0a948ef51dda7366f3d5174d6739 242 Gene3D G3DSA:1.10.10.60 138 191 6.3E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS12015 cafc0a948ef51dda7366f3d5174d6739 242 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 192 235 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV93_RS12015 cafc0a948ef51dda7366f3d5174d6739 242 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 239 4.4E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV93_RS12015 cafc0a948ef51dda7366f3d5174d6739 242 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 208 223 4.4E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV93_RS12015 cafc0a948ef51dda7366f3d5174d6739 242 SMART SM00342 155 239 1.8E-24 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV93_RS12015 cafc0a948ef51dda7366f3d5174d6739 242 SUPERFAMILY SSF46689 192 239 1.84E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS12015 cafc0a948ef51dda7366f3d5174d6739 242 PANTHER PTHR11019:SF96 134 239 1.4E-24 T 23-04-2016 VV93_RS12015 cafc0a948ef51dda7366f3d5174d6739 242 PANTHER PTHR11019 134 239 1.4E-24 T 23-04-2016 VV93_RS12015 cafc0a948ef51dda7366f3d5174d6739 242 Pfam PF12833 Helix-turn-helix domain 165 239 1.6E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV93_RS12015 cafc0a948ef51dda7366f3d5174d6739 242 SUPERFAMILY SSF46689 140 188 9.86E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS03570 f07c6a2a9bebfed1b73af51054762704 171 PANTHER PTHR14021 1 170 1.9E-55 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 VV93_RS03570 f07c6a2a9bebfed1b73af51054762704 171 Gene3D G3DSA:1.10.287.110 1 73 1.3E-26 T 23-04-2016 IPR001623 DnaJ domain VV93_RS03570 f07c6a2a9bebfed1b73af51054762704 171 SUPERFAMILY SSF47144 78 170 1.83E-25 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 VV93_RS03570 f07c6a2a9bebfed1b73af51054762704 171 Pfam PF00226 DnaJ domain 2 70 7.2E-8 T 23-04-2016 IPR001623 DnaJ domain VV93_RS03570 f07c6a2a9bebfed1b73af51054762704 171 PANTHER PTHR14021:SF15 1 170 1.9E-55 T 23-04-2016 VV93_RS03570 f07c6a2a9bebfed1b73af51054762704 171 SMART SM00271 1 66 3.4E-10 T 23-04-2016 IPR001623 DnaJ domain VV93_RS03570 f07c6a2a9bebfed1b73af51054762704 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.73 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 VV93_RS03570 f07c6a2a9bebfed1b73af51054762704 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 4.2E-42 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 VV93_RS03570 f07c6a2a9bebfed1b73af51054762704 171 Gene3D G3DSA:1.20.1280.20 81 170 8.4E-32 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 VV93_RS03570 f07c6a2a9bebfed1b73af51054762704 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 2.3E-21 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 VV93_RS03570 f07c6a2a9bebfed1b73af51054762704 171 SUPERFAMILY SSF46565 1 73 7.59E-18 T 23-04-2016 IPR001623 DnaJ domain VV93_RS02040 33eb552f9136952c6c93ada77091b861 571 Pfam PF07244 Surface antigen variable number repeat 106 181 2.8E-5 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 VV93_RS02040 33eb552f9136952c6c93ada77091b861 571 Gene3D G3DSA:2.40.160.50 275 568 4.2E-23 T 23-04-2016 VV93_RS02040 33eb552f9136952c6c93ada77091b861 571 PANTHER PTHR12815 8 571 3.2E-219 T 23-04-2016 VV93_RS02040 33eb552f9136952c6c93ada77091b861 571 PANTHER PTHR12815:SF12 8 571 3.2E-219 T 23-04-2016 VV93_RS02040 33eb552f9136952c6c93ada77091b861 571 Pfam PF01103 Surface antigen 275 568 1.4E-29 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 VV93_RS07720 df2dc2af7e313a188c96f457ae174288 160 Gene3D G3DSA:3.30.70.860 93 160 6.3E-34 T 23-04-2016 VV93_RS07720 df2dc2af7e313a188c96f457ae174288 160 PANTHER PTHR30476 1 160 2.0E-87 T 23-04-2016 VV93_RS07720 df2dc2af7e313a188c96f457ae174288 160 Gene3D G3DSA:3.30.70.990 9 92 8.0E-30 T 23-04-2016 VV93_RS07720 df2dc2af7e313a188c96f457ae174288 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 3.4E-63 T 23-04-2016 IPR007551 Protein of unknown function DUF520 VV93_RS07720 df2dc2af7e313a188c96f457ae174288 160 PANTHER PTHR30476:SF0 1 160 2.0E-87 T 23-04-2016 VV93_RS07720 df2dc2af7e313a188c96f457ae174288 160 SUPERFAMILY SSF89963 2 85 1.44E-29 T 23-04-2016 IPR007551 Protein of unknown function DUF520 VV93_RS07720 df2dc2af7e313a188c96f457ae174288 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.225 T 23-04-2016 IPR007551 Protein of unknown function DUF520 VV93_RS07720 df2dc2af7e313a188c96f457ae174288 160 SUPERFAMILY SSF89963 88 160 1.83E-28 T 23-04-2016 IPR007551 Protein of unknown function DUF520 VV93_RS12210 f56993dc49403c5add248028f758021b 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 1.5E-23 T 23-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal VV93_RS12210 f56993dc49403c5add248028f758021b 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 1.4E-88 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS12210 f56993dc49403c5add248028f758021b 314 SUPERFAMILY SSF88697 250 310 9.94E-15 T 23-04-2016 IPR015947 PUA-like domain VV93_RS12210 f56993dc49403c5add248028f758021b 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 1.9E-57 T 23-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 VV93_RS12210 f56993dc49403c5add248028f758021b 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.986 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS12210 f56993dc49403c5add248028f758021b 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 2.9E-20 T 23-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS12210 f56993dc49403c5add248028f758021b 314 SUPERFAMILY SSF55120 9 247 2.79E-83 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS12210 f56993dc49403c5add248028f758021b 314 PANTHER PTHR13767:SF2 1 308 1.5E-131 T 23-04-2016 VV93_RS12210 f56993dc49403c5add248028f758021b 314 Gene3D G3DSA:2.30.130.10 249 312 2.3E-26 T 23-04-2016 IPR015947 PUA-like domain VV93_RS12210 f56993dc49403c5add248028f758021b 314 PANTHER PTHR13767 1 308 1.5E-131 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS15050 a55a6417f7860dfafd1571de756e2ff2 189 SUPERFAMILY SSF57783 66 109 1.79E-14 T 23-04-2016 VV93_RS15050 a55a6417f7860dfafd1571de756e2ff2 189 Gene3D G3DSA:3.30.65.10 16 60 7.4E-14 T 23-04-2016 VV93_RS15050 a55a6417f7860dfafd1571de756e2ff2 189 Gene3D G3DSA:3.30.65.10 67 105 2.8E-14 T 23-04-2016 VV93_RS15050 a55a6417f7860dfafd1571de756e2ff2 189 Gene3D G3DSA:3.30.65.10 115 146 2.1E-6 T 23-04-2016 VV93_RS15050 a55a6417f7860dfafd1571de756e2ff2 189 PANTHER PTHR11390:SF26 3 187 2.6E-88 T 23-04-2016 VV93_RS15050 a55a6417f7860dfafd1571de756e2ff2 189 PANTHER PTHR11390 3 187 2.6E-88 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS15050 a55a6417f7860dfafd1571de756e2ff2 189 SUPERFAMILY SSF57783 16 64 5.44E-14 T 23-04-2016 VV93_RS15050 a55a6417f7860dfafd1571de756e2ff2 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 116 152 6.1E-16 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VV93_RS15050 a55a6417f7860dfafd1571de756e2ff2 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 22 57 1.6E-15 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VV93_RS15050 a55a6417f7860dfafd1571de756e2ff2 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 67 103 4.3E-17 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 Gene3D G3DSA:3.40.50.300 160 342 1.1E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 PANTHER PTHR11638:SF18 1 854 0.0 T 23-04-2016 VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 4.6E-26 T 23-04-2016 IPR019489 Clp ATPase, C-terminal VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 SUPERFAMILY SSF52540 159 545 1.73E-100 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 4.4E-57 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 SMART SM01086 766 855 4.4E-36 T 23-04-2016 IPR019489 Clp ATPase, C-terminal VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 SUPERFAMILY SSF81923 4 156 4.05E-42 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 PANTHER PTHR11638 1 854 0.0 T 23-04-2016 VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 SMART SM00382 198 344 3.2E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 SMART SM00382 597 748 1.3E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 2.1E-11 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.5E-13 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 Gene3D G3DSA:1.10.8.60 778 855 6.9E-30 T 23-04-2016 VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 23-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 SUPERFAMILY SSF52540 546 854 4.77E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 Gene3D G3DSA:1.10.1780.10 1 148 2.9E-45 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 Gene3D G3DSA:3.40.50.300 550 777 1.0E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 Gene3D G3DSA:1.10.8.60 343 428 1.0E-36 T 23-04-2016 VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 VV93_RS03290 2e7ddf68a77beae48832270cbcfb26d6 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 335 2.9E-13 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 Gene3D G3DSA:3.40.50.620 424 571 2.0E-156 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 Gene3D G3DSA:3.40.50.620 616 645 2.0E-156 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 Gene3D G3DSA:3.40.50.620 4 222 2.0E-156 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 SUPERFAMILY SSF52374 4 226 2.91E-147 T 23-04-2016 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 SUPERFAMILY SSF52374 415 666 2.91E-147 T 23-04-2016 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 PANTHER PTHR11946 239 569 0.0 T 23-04-2016 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 PANTHER PTHR11946 612 857 0.0 T 23-04-2016 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 PANTHER PTHR11946 1 206 0.0 T 23-04-2016 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 Pfam PF08264 Anticodon-binding domain of tRNA 699 820 2.0E-16 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 856 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 Gene3D G3DSA:1.10.730.10 646 792 9.9E-46 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 2.1E-79 T 23-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 SUPERFAMILY SSF47323 660 856 2.8E-34 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.2E-52 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 7.2E-52 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 522 544 7.2E-52 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.2E-52 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 7.2E-52 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 555 565 7.2E-52 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.2E-52 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 SUPERFAMILY SSF50677 226 414 3.14E-56 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 Gene3D G3DSA:3.90.740.10 223 423 3.9E-59 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 PANTHER PTHR11946:SF7 239 569 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 PANTHER PTHR11946:SF7 612 857 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 PANTHER PTHR11946:SF7 1 206 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 856 23.409 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 2.0E-26 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 570 5.2E-9 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS04280 78c003f14d1fc3b33b87db7736cea3ac 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 649 1.5E-7 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 ProSitePatterns PS01047 Heavy-metal-associated domain. 175 204 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 36 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 309 904 4.0E-185 T 23-04-2016 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 PANTHER PTHR24093 91 904 0.0 T 23-04-2016 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 Pfam PF00122 E1-E2 ATPase 365 586 3.9E-60 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 SUPERFAMILY SSF56784 594 614 5.5E-60 T 23-04-2016 IPR023214 HAD-like domain VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 SUPERFAMILY SSF56784 652 900 5.5E-60 T 23-04-2016 IPR023214 HAD-like domain VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 794 813 2.8E-27 T 23-04-2016 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 719 730 2.8E-27 T 23-04-2016 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 444 458 2.8E-27 T 23-04-2016 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 596 610 2.8E-27 T 23-04-2016 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 741 751 2.8E-27 T 23-04-2016 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 817 829 2.8E-27 T 23-04-2016 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 366 871 3.8E-89 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 SUPERFAMILY SSF55008 171 237 3.8E-15 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 Gene3D G3DSA:3.30.70.100 1 62 3.5E-8 T 23-04-2016 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 SUPERFAMILY SSF55008 2 62 2.23E-7 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 PANTHER PTHR24093:SF319 91 904 0.0 T 23-04-2016 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 598 604 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 Pfam PF00702 haloacid dehalogenase-like hydrolase 592 808 4.7E-45 T 23-04-2016 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 Gene3D G3DSA:3.30.70.100 171 254 1.0E-19 T 23-04-2016 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 Gene3D G3DSA:2.70.150.10 340 495 1.2E-30 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 Gene3D G3DSA:3.40.1110.10 611 721 7.6E-17 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 SUPERFAMILY SSF81653 397 494 5.62E-26 T 23-04-2016 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 SUPERFAMILY SSF55008 66 125 7.59E-8 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 327 903 9.2E-184 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 Pfam PF00403 Heavy-metal-associated domain 175 234 2.0E-12 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 Pfam PF00403 Heavy-metal-associated domain 5 61 8.7E-7 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 794 810 3.9E-5 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 825 850 3.9E-5 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 SUPERFAMILY SSF81665 495 590 4.45E-9 T 23-04-2016 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 SUPERFAMILY SSF81665 342 398 4.45E-9 T 23-04-2016 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 Gene3D G3DSA:3.30.70.100 67 126 2.2E-8 T 23-04-2016 VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 Gene3D G3DSA:3.40.50.1000 722 862 2.2E-56 T 23-04-2016 IPR023214 HAD-like domain VV93_RS04495 defb2b5d56713074697a97eb062dcafd 912 Gene3D G3DSA:3.40.50.1000 568 610 2.2E-56 T 23-04-2016 IPR023214 HAD-like domain VV93_RS13095 0ea8d42a65e94b866b72c1d18c480846 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 7.2E-68 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 VV93_RS13095 0ea8d42a65e94b866b72c1d18c480846 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.785 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 VV93_RS13095 0ea8d42a65e94b866b72c1d18c480846 239 Pfam PF02390 Putative methyltransferase 62 232 4.6E-58 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 VV93_RS13095 0ea8d42a65e94b866b72c1d18c480846 239 Gene3D G3DSA:3.40.50.150 60 207 2.5E-13 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS13095 0ea8d42a65e94b866b72c1d18c480846 239 PANTHER PTHR23417:SF14 16 238 3.6E-87 T 23-04-2016 VV93_RS13095 0ea8d42a65e94b866b72c1d18c480846 239 SUPERFAMILY SSF53335 16 237 4.18E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS13095 0ea8d42a65e94b866b72c1d18c480846 239 PANTHER PTHR23417 16 238 3.6E-87 T 23-04-2016 VV93_RS04110 5098ba39c9ba3e14dc698a1117e694d5 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 1.6E-110 T 23-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 VV93_RS04110 5098ba39c9ba3e14dc698a1117e694d5 482 Gene3D G3DSA:3.40.250.10 403 480 5.8E-11 T 23-04-2016 IPR001763 Rhodanese-like domain VV93_RS04110 5098ba39c9ba3e14dc698a1117e694d5 482 Gene3D G3DSA:3.40.50.620 173 333 1.3E-33 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS04110 5098ba39c9ba3e14dc698a1117e694d5 482 SMART SM00981 75 165 1.9E-23 T 23-04-2016 IPR004114 THUMP domain GO:0003723 VV93_RS04110 5098ba39c9ba3e14dc698a1117e694d5 482 SUPERFAMILY SSF52402 174 372 1.01E-40 T 23-04-2016 VV93_RS04110 5098ba39c9ba3e14dc698a1117e694d5 482 SUPERFAMILY SSF52821 401 481 2.49E-12 T 23-04-2016 IPR001763 Rhodanese-like domain VV93_RS04110 5098ba39c9ba3e14dc698a1117e694d5 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 220.348 T 23-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 VV93_RS04110 5098ba39c9ba3e14dc698a1117e694d5 482 PANTHER PTHR14911:SF15 3 417 5.0E-251 T 23-04-2016 VV93_RS04110 5098ba39c9ba3e14dc698a1117e694d5 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 3.0E-70 T 23-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 VV93_RS04110 5098ba39c9ba3e14dc698a1117e694d5 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 3.7E-42 T 23-04-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 VV93_RS04110 5098ba39c9ba3e14dc698a1117e694d5 482 PANTHER PTHR14911 3 417 5.0E-251 T 23-04-2016 VV93_RS04110 5098ba39c9ba3e14dc698a1117e694d5 482 SUPERFAMILY SSF143437 1 173 9.77E-47 T 23-04-2016 VV93_RS04110 5098ba39c9ba3e14dc698a1117e694d5 482 Pfam PF02926 THUMP domain 59 158 1.4E-22 T 23-04-2016 IPR004114 THUMP domain GO:0003723 VV93_RS02635 cf63a4294fa9555163244a000ef2bfee 419 PANTHER PTHR11101:SF63 1 418 1.1E-264 T 23-04-2016 VV93_RS02635 cf63a4294fa9555163244a000ef2bfee 419 PANTHER PTHR11101 1 418 1.1E-264 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 VV93_RS02635 cf63a4294fa9555163244a000ef2bfee 419 Pfam PF01384 Phosphate transporter family 26 407 5.9E-119 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 VV93_RS11780 fce9de884cb27090c3e76ca93ed7c410 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 1.3E-16 T 23-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VV93_RS11780 fce9de884cb27090c3e76ca93ed7c410 343 Gene3D G3DSA:2.160.10.10 173 340 1.9E-33 T 23-04-2016 VV93_RS11780 fce9de884cb27090c3e76ca93ed7c410 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 4.6E-13 T 23-04-2016 IPR001451 Hexapeptide repeat VV93_RS11780 fce9de884cb27090c3e76ca93ed7c410 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 1.5E-179 T 23-04-2016 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VV93_RS11780 fce9de884cb27090c3e76ca93ed7c410 343 Gene3D G3DSA:3.30.60.70 131 171 3.4E-22 T 23-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VV93_RS11780 fce9de884cb27090c3e76ca93ed7c410 343 SUPERFAMILY SSF51161 90 323 7.21E-35 T 23-04-2016 IPR011004 Trimeric LpxA-like VV93_RS11780 fce9de884cb27090c3e76ca93ed7c410 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 46.069 T 23-04-2016 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VV93_RS10025 1017a2f4bb81a05ce2ee276e397b9783 346 Gene3D G3DSA:1.10.287.70 6 103 1.5E-15 T 23-04-2016 VV93_RS10025 1017a2f4bb81a05ce2ee276e397b9783 346 SUPERFAMILY SSF81324 3 132 1.07E-19 T 23-04-2016 VV93_RS10025 1017a2f4bb81a05ce2ee276e397b9783 346 PANTHER PTHR16254:SF21 14 283 1.1E-12 T 23-04-2016 VV93_RS10025 1017a2f4bb81a05ce2ee276e397b9783 346 Gene3D G3DSA:3.40.50.720 113 233 1.8E-16 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS10025 1017a2f4bb81a05ce2ee276e397b9783 346 SUPERFAMILY SSF51735 121 240 3.64E-11 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS10025 1017a2f4bb81a05ce2ee276e397b9783 346 Pfam PF07885 Ion channel 26 103 9.2E-14 T 23-04-2016 IPR013099 Potassium channel domain VV93_RS10025 1017a2f4bb81a05ce2ee276e397b9783 346 PANTHER PTHR16254 14 283 1.1E-12 T 23-04-2016 VV93_RS13870 3ad91e66cefeae4d270ac35e704625d0 378 PANTHER PTHR11014:SF75 6 377 5.2E-197 T 23-04-2016 VV93_RS13870 3ad91e66cefeae4d270ac35e704625d0 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 1.6E-127 T 23-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 VV93_RS13870 3ad91e66cefeae4d270ac35e704625d0 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 64.146 T 23-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 VV93_RS13870 3ad91e66cefeae4d270ac35e704625d0 378 Gene3D G3DSA:3.30.70.360 186 287 8.7E-26 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain VV93_RS13870 3ad91e66cefeae4d270ac35e704625d0 378 SUPERFAMILY SSF55031 177 291 1.64E-22 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain VV93_RS13870 3ad91e66cefeae4d270ac35e704625d0 378 SUPERFAMILY SSF53187 3 176 1.09E-54 T 23-04-2016 VV93_RS13870 3ad91e66cefeae4d270ac35e704625d0 378 SUPERFAMILY SSF53187 301 377 1.09E-54 T 23-04-2016 VV93_RS13870 3ad91e66cefeae4d270ac35e704625d0 378 PANTHER PTHR11014 6 377 5.2E-197 T 23-04-2016 VV93_RS13870 3ad91e66cefeae4d270ac35e704625d0 378 Pfam PF07687 Peptidase dimerisation domain 174 285 1.9E-24 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain VV93_RS13870 3ad91e66cefeae4d270ac35e704625d0 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VV93_RS13870 3ad91e66cefeae4d270ac35e704625d0 378 Gene3D G3DSA:3.40.630.10 5 185 2.9E-60 T 23-04-2016 VV93_RS13870 3ad91e66cefeae4d270ac35e704625d0 378 Gene3D G3DSA:3.40.630.10 319 377 2.9E-60 T 23-04-2016 VV93_RS13870 3ad91e66cefeae4d270ac35e704625d0 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VV93_RS13870 3ad91e66cefeae4d270ac35e704625d0 378 Pfam PF01546 Peptidase family M20/M25/M40 72 374 1.4E-31 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VV93_RS01785 04624f5fe61d85c00fdc98a59c8cf36a 446 SMART SM00849 13 232 8.1E-15 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS01785 04624f5fe61d85c00fdc98a59c8cf36a 446 SUPERFAMILY SSF56281 1 443 2.84E-120 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS01785 04624f5fe61d85c00fdc98a59c8cf36a 446 Gene3D G3DSA:3.60.15.10 2 254 9.6E-41 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS01785 04624f5fe61d85c00fdc98a59c8cf36a 446 PANTHER PTHR11203 150 445 3.0E-123 T 23-04-2016 VV93_RS01785 04624f5fe61d85c00fdc98a59c8cf36a 446 PANTHER PTHR11203 1 132 3.0E-123 T 23-04-2016 VV93_RS01785 04624f5fe61d85c00fdc98a59c8cf36a 446 Pfam PF00753 Metallo-beta-lactamase superfamily 20 194 9.6E-12 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS01785 04624f5fe61d85c00fdc98a59c8cf36a 446 SMART SM01027 248 378 5.1E-54 T 23-04-2016 IPR022712 Beta-Casp domain VV93_RS01785 04624f5fe61d85c00fdc98a59c8cf36a 446 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 392 443 2.9E-13 T 23-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain VV93_RS01785 04624f5fe61d85c00fdc98a59c8cf36a 446 Pfam PF10996 Beta-Casp domain 248 378 4.2E-27 T 23-04-2016 IPR022712 Beta-Casp domain VV93_RS01785 04624f5fe61d85c00fdc98a59c8cf36a 446 PANTHER PTHR11203:SF11 150 445 3.0E-123 T 23-04-2016 VV93_RS01785 04624f5fe61d85c00fdc98a59c8cf36a 446 PANTHER PTHR11203:SF11 1 132 3.0E-123 T 23-04-2016 VV93_RS11050 5fedfe8774dc4cd16f584f8c7f2def1b 344 Gene3D G3DSA:1.10.287.130 119 184 2.2E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS11050 5fedfe8774dc4cd16f584f8c7f2def1b 344 SUPERFAMILY SSF55874 177 338 1.44E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS11050 5fedfe8774dc4cd16f584f8c7f2def1b 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 282 1.2E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS11050 5fedfe8774dc4cd16f584f8c7f2def1b 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 315 1.2E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS11050 5fedfe8774dc4cd16f584f8c7f2def1b 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 334 1.2E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS11050 5fedfe8774dc4cd16f584f8c7f2def1b 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 296 1.2E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS11050 5fedfe8774dc4cd16f584f8c7f2def1b 344 SMART SM00387 231 337 2.9E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS11050 5fedfe8774dc4cd16f584f8c7f2def1b 344 SUPERFAMILY SSF55785 18 85 2.3E-7 T 23-04-2016 IPR000014 PAS domain VV93_RS11050 5fedfe8774dc4cd16f584f8c7f2def1b 344 Gene3D G3DSA:3.30.450.20 18 88 5.8E-7 T 23-04-2016 VV93_RS11050 5fedfe8774dc4cd16f584f8c7f2def1b 344 SUPERFAMILY SSF47384 117 188 3.34E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS11050 5fedfe8774dc4cd16f584f8c7f2def1b 344 Gene3D G3DSA:3.30.565.10 192 336 1.2E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS11050 5fedfe8774dc4cd16f584f8c7f2def1b 344 PANTHER PTHR24423 8 339 8.1E-110 T 23-04-2016 VV93_RS11050 5fedfe8774dc4cd16f584f8c7f2def1b 344 SMART SM00388 122 188 6.8E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS11050 5fedfe8774dc4cd16f584f8c7f2def1b 344 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 186 3.9E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS11050 5fedfe8774dc4cd16f584f8c7f2def1b 344 Pfam PF13188 PAS domain 18 59 2.0E-6 T 23-04-2016 IPR000014 PAS domain VV93_RS11050 5fedfe8774dc4cd16f584f8c7f2def1b 344 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 235 336 6.8E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS11050 5fedfe8774dc4cd16f584f8c7f2def1b 344 PANTHER PTHR24423:SF474 8 339 8.1E-110 T 23-04-2016 VV93_RS01155 988fb37484558abe023e54abe36d3da3 432 SUPERFAMILY SSF55874 285 429 2.23E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS01155 988fb37484558abe023e54abe36d3da3 432 Pfam PF00672 HAMP domain 153 217 6.3E-15 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS01155 988fb37484558abe023e54abe36d3da3 432 SUPERFAMILY SSF158472 171 218 2.62E-5 T 23-04-2016 VV93_RS01155 988fb37484558abe023e54abe36d3da3 432 PANTHER PTHR24423 1 7 6.4E-60 T 23-04-2016 VV93_RS01155 988fb37484558abe023e54abe36d3da3 432 PANTHER PTHR24423 163 428 6.4E-60 T 23-04-2016 VV93_RS01155 988fb37484558abe023e54abe36d3da3 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 7.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS01155 988fb37484558abe023e54abe36d3da3 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 7.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS01155 988fb37484558abe023e54abe36d3da3 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 7.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS01155 988fb37484558abe023e54abe36d3da3 432 SMART SM00304 169 221 1.8E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS01155 988fb37484558abe023e54abe36d3da3 432 Gene3D G3DSA:1.10.287.130 214 276 1.1E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS01155 988fb37484558abe023e54abe36d3da3 432 SMART SM00387 321 431 1.4E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS01155 988fb37484558abe023e54abe36d3da3 432 SUPERFAMILY SSF47384 215 277 8.83E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS01155 988fb37484558abe023e54abe36d3da3 432 SMART SM00388 222 282 1.7E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS01155 988fb37484558abe023e54abe36d3da3 432 Gene3D G3DSA:3.30.565.10 305 430 1.9E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS01155 988fb37484558abe023e54abe36d3da3 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 276 2.7E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS01155 988fb37484558abe023e54abe36d3da3 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 429 4.6E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS00355 696352469e86ac92a0062087aa898da7 154 Gene3D G3DSA:3.30.70.920 71 145 4.4E-23 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VV93_RS00355 696352469e86ac92a0062087aa898da7 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 2.6E-8 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VV93_RS00355 696352469e86ac92a0062087aa898da7 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 2.6E-8 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VV93_RS00355 696352469e86ac92a0062087aa898da7 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 2.6E-8 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VV93_RS00355 696352469e86ac92a0062087aa898da7 154 SUPERFAMILY SSF46785 7 68 9.7E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS00355 696352469e86ac92a0062087aa898da7 154 SMART SM00344 8 115 2.2E-40 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VV93_RS00355 696352469e86ac92a0062087aa898da7 154 Gene3D G3DSA:1.10.10.10 4 59 7.1E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS00355 696352469e86ac92a0062087aa898da7 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.4E-16 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VV93_RS00355 696352469e86ac92a0062087aa898da7 154 PANTHER PTHR30154 1 154 3.5E-61 T 23-04-2016 VV93_RS00355 696352469e86ac92a0062087aa898da7 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 8.1E-13 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VV93_RS00355 696352469e86ac92a0062087aa898da7 154 PANTHER PTHR30154:SF2 1 154 3.5E-61 T 23-04-2016 VV93_RS00355 696352469e86ac92a0062087aa898da7 154 SUPERFAMILY SSF54909 69 154 4.42E-19 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 9.1E-57 T 23-04-2016 VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 154 1.1E-23 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 1.4E-10 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 1.1E-295 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:3.30.70.870 308 404 4.7E-39 T 23-04-2016 VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 PANTHER PTHR23115:SF14 1 597 9.9E-298 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 PANTHER PTHR23115 1 597 9.9E-298 T 23-04-2016 VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:2.40.30.10 210 307 7.1E-29 T 23-04-2016 VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 SUPERFAMILY SSF50447 155 303 1.04E-35 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:3.30.70.240 405 482 8.3E-33 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 SUPERFAMILY SSF52540 5 211 1.06E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.1E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.1E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.1E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.1E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.1E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:3.40.50.300 7 209 2.3E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 SUPERFAMILY SSF54980 402 516 1.39E-27 T 23-04-2016 IPR009022 Elongation factor G, III-V domain VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 SUPERFAMILY SSF54980 306 391 3.35E-15 T 23-04-2016 IPR009022 Elongation factor G, III-V domain VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:2.40.50.250 487 581 7.0E-40 T 23-04-2016 VV93_RS01000 fdc7b275982ad846a937d4ddd3f1a9f6 609 Pfam PF00679 Elongation factor G C-terminus 399 480 7.1E-23 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain VV93_RS09795 152d3c3dfe73fb296f1343e6961b5949 855 Gene3D G3DSA:3.40.50.300 319 359 1.3E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09795 152d3c3dfe73fb296f1343e6961b5949 855 Gene3D G3DSA:3.40.50.300 400 481 1.3E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09795 152d3c3dfe73fb296f1343e6961b5949 855 Pfam PF00270 DEAD/DEAH box helicase 77 240 5.4E-13 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV93_RS09795 152d3c3dfe73fb296f1343e6961b5949 855 SMART SM00490 394 476 8.2E-8 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS09795 152d3c3dfe73fb296f1343e6961b5949 855 Gene3D G3DSA:3.40.50.300 56 256 2.1E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09795 152d3c3dfe73fb296f1343e6961b5949 855 SUPERFAMILY SSF52540 400 485 2.36E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09795 152d3c3dfe73fb296f1343e6961b5949 855 SUPERFAMILY SSF52540 304 359 2.36E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09795 152d3c3dfe73fb296f1343e6961b5949 855 SUPERFAMILY SSF52540 76 242 2.36E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09795 152d3c3dfe73fb296f1343e6961b5949 855 SMART SM00487 59 267 5.0E-12 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV93_RS09635 e359c3ec8dae0188e42ddfa5a2ec28d6 778 SUPERFAMILY SSF51726 5 393 3.92E-108 T 23-04-2016 VV93_RS09635 e359c3ec8dae0188e42ddfa5a2ec28d6 778 PANTHER PTHR30519 1 763 0.0 T 23-04-2016 VV93_RS09635 e359c3ec8dae0188e42ddfa5a2ec28d6 778 PIRSF PIRSF000382 2 763 0.0 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VV93_RS09635 e359c3ec8dae0188e42ddfa5a2ec28d6 778 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.901 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VV93_RS09635 e359c3ec8dae0188e42ddfa5a2ec28d6 778 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 1.5E-118 T 23-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VV93_RS09635 e359c3ec8dae0188e42ddfa5a2ec28d6 778 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 3.0E-151 T 23-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VV93_RS09635 e359c3ec8dae0188e42ddfa5a2ec28d6 778 SUPERFAMILY SSF51726 396 757 7.06E-115 T 23-04-2016 VV93_RS09635 e359c3ec8dae0188e42ddfa5a2ec28d6 778 Gene3D G3DSA:3.20.20.210 392 760 7.4E-131 T 23-04-2016 VV93_RS09635 e359c3ec8dae0188e42ddfa5a2ec28d6 778 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 757 0.0 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VV93_RS09635 e359c3ec8dae0188e42ddfa5a2ec28d6 778 Gene3D G3DSA:3.20.20.210 4 388 6.9E-147 T 23-04-2016 VV93_RS09635 e359c3ec8dae0188e42ddfa5a2ec28d6 778 PANTHER PTHR30519:SF0 1 763 0.0 T 23-04-2016 VV93_RS12620 75c99fa2985c006dea84a5ec186fc5a9 425 Pfam PF00571 CBS domain 278 326 9.9E-6 T 23-04-2016 IPR000644 CBS domain VV93_RS12620 75c99fa2985c006dea84a5ec186fc5a9 425 Pfam PF01595 Domain of unknown function DUF21 13 181 4.0E-49 T 23-04-2016 IPR002550 Domain of unknown function DUF21 VV93_RS12620 75c99fa2985c006dea84a5ec186fc5a9 425 PANTHER PTHR22777:SF3 2 416 6.3E-154 T 23-04-2016 VV93_RS12620 75c99fa2985c006dea84a5ec186fc5a9 425 PANTHER PTHR22777 2 416 6.3E-154 T 23-04-2016 VV93_RS12620 75c99fa2985c006dea84a5ec186fc5a9 425 Pfam PF03471 Transporter associated domain 344 418 4.8E-17 T 23-04-2016 IPR005170 Transporter-associated domain VV93_RS12620 75c99fa2985c006dea84a5ec186fc5a9 425 Gene3D G3DSA:3.30.465.10 319 418 1.7E-23 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VV93_RS12620 75c99fa2985c006dea84a5ec186fc5a9 425 Gene3D G3DSA:3.10.580.10 192 318 5.3E-13 T 23-04-2016 VV93_RS12620 75c99fa2985c006dea84a5ec186fc5a9 425 SMART SM01091 342 420 1.1E-22 T 23-04-2016 IPR005170 Transporter-associated domain VV93_RS12620 75c99fa2985c006dea84a5ec186fc5a9 425 SUPERFAMILY SSF54631 192 329 7.58E-25 T 23-04-2016 VV93_RS12620 75c99fa2985c006dea84a5ec186fc5a9 425 SUPERFAMILY SSF56176 340 421 1.47E-20 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VV93_RS04315 6308f373ae79b2f4ed3bb59b53b9a145 382 SUPERFAMILY SSF51905 264 375 3.18E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS04315 6308f373ae79b2f4ed3bb59b53b9a145 382 SUPERFAMILY SSF51905 3 175 3.18E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS04315 6308f373ae79b2f4ed3bb59b53b9a145 382 Gene3D G3DSA:3.50.50.60 3 180 1.9E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS04315 6308f373ae79b2f4ed3bb59b53b9a145 382 Gene3D G3DSA:3.50.50.60 265 346 1.9E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS04315 6308f373ae79b2f4ed3bb59b53b9a145 382 PANTHER PTHR13789 3 382 4.5E-204 T 23-04-2016 VV93_RS04315 6308f373ae79b2f4ed3bb59b53b9a145 382 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 381 1.5E-112 T 23-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 VV93_RS04315 6308f373ae79b2f4ed3bb59b53b9a145 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 9.5E-19 T 23-04-2016 VV93_RS04315 6308f373ae79b2f4ed3bb59b53b9a145 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 9.5E-19 T 23-04-2016 VV93_RS04315 6308f373ae79b2f4ed3bb59b53b9a145 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 9.5E-19 T 23-04-2016 VV93_RS04315 6308f373ae79b2f4ed3bb59b53b9a145 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 9.5E-19 T 23-04-2016 VV93_RS04315 6308f373ae79b2f4ed3bb59b53b9a145 382 Pfam PF01494 FAD binding domain 151 309 7.0E-20 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 VV93_RS04315 6308f373ae79b2f4ed3bb59b53b9a145 382 PANTHER PTHR13789:SF233 3 382 4.5E-204 T 23-04-2016 VV93_RS09270 c6e26b19a2f0e28cdf6a0e69b3772575 297 Gene3D G3DSA:3.30.70.20 49 93 1.2E-11 T 23-04-2016 VV93_RS09270 c6e26b19a2f0e28cdf6a0e69b3772575 297 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV93_RS09270 c6e26b19a2f0e28cdf6a0e69b3772575 297 Pfam PF04055 Radical SAM superfamily 29 235 1.0E-15 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VV93_RS09270 c6e26b19a2f0e28cdf6a0e69b3772575 297 Gene3D G3DSA:3.80.30.10 117 280 6.0E-36 T 23-04-2016 VV93_RS09270 c6e26b19a2f0e28cdf6a0e69b3772575 297 PIRSF PIRSF000371 1 293 2.6E-82 T 23-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VV93_RS09270 c6e26b19a2f0e28cdf6a0e69b3772575 297 PANTHER PTHR30352 97 279 1.4E-91 T 23-04-2016 VV93_RS09270 c6e26b19a2f0e28cdf6a0e69b3772575 297 PANTHER PTHR30352 12 64 1.4E-91 T 23-04-2016 VV93_RS09270 c6e26b19a2f0e28cdf6a0e69b3772575 297 SUPERFAMILY SSF54862 28 143 6.84E-16 T 23-04-2016 VV93_RS09270 c6e26b19a2f0e28cdf6a0e69b3772575 297 PANTHER PTHR30352:SF13 97 279 1.4E-91 T 23-04-2016 VV93_RS09270 c6e26b19a2f0e28cdf6a0e69b3772575 297 PANTHER PTHR30352:SF13 12 64 1.4E-91 T 23-04-2016 VV93_RS09270 c6e26b19a2f0e28cdf6a0e69b3772575 297 SUPERFAMILY SSF102114 84 289 7.45E-5 T 23-04-2016 VV93_RS09270 c6e26b19a2f0e28cdf6a0e69b3772575 297 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 10 287 2.6E-123 T 23-04-2016 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW VV93_RS09270 c6e26b19a2f0e28cdf6a0e69b3772575 297 Pfam PF13353 4Fe-4S single cluster domain 21 146 3.2E-8 T 23-04-2016 VV93_RS09270 c6e26b19a2f0e28cdf6a0e69b3772575 297 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 23-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 PANTHER PTHR24423:SF540 269 571 1.3E-184 T 23-04-2016 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 PANTHER PTHR24423:SF540 192 230 1.3E-184 T 23-04-2016 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 PANTHER PTHR24423:SF540 665 830 1.3E-184 T 23-04-2016 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 PANTHER PTHR24423:SF540 6 20 1.3E-184 T 23-04-2016 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 SMART SM00304 198 250 3.3E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 Pfam PF01627 Hpt domain 836 917 1.4E-11 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 Pfam PF00672 HAMP domain 179 246 9.2E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 SUPERFAMILY SSF52172 532 644 1.27E-5 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 PANTHER PTHR24423 269 571 1.3E-184 T 23-04-2016 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 PANTHER PTHR24423 192 230 1.3E-184 T 23-04-2016 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 PANTHER PTHR24423 665 830 1.3E-184 T 23-04-2016 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 PANTHER PTHR24423 6 20 1.3E-184 T 23-04-2016 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 SUPERFAMILY SSF158472 200 247 4.84E-6 T 23-04-2016 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 SMART SM00448 666 779 7.4E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 SMART SM00073 826 924 9.5E-7 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 SUPERFAMILY SSF55874 344 517 1.02E-44 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 SUPERFAMILY SSF47384 275 356 1.04E-22 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 Gene3D G3DSA:3.40.50.2300 663 783 1.8E-39 T 23-04-2016 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 Pfam PF00072 Response regulator receiver domain 668 778 1.4E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 SMART SM00388 290 355 3.4E-24 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 Gene3D G3DSA:1.10.287.130 282 351 1.6E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 2.8E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 SMART SM00387 402 518 5.0E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 Gene3D G3DSA:1.20.120.160 828 927 9.4E-17 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 Gene3D G3DSA:3.30.565.10 356 521 3.5E-45 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 SUPERFAMILY SSF52172 664 782 2.7E-36 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 SUPERFAMILY SSF47226 762 775 5.23E-21 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 SUPERFAMILY SSF47226 816 916 5.23E-21 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 175 3.8E-50 T 23-04-2016 IPR019247 Histidine kinase BarA, N-terminal VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 9.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 9.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 9.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 9.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS12810 0267556f6ce320b354023ceb157d111e 928 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 516 5.5E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS09460 842b8b8cccf33c5dda7702ad65bf5afb 396 PANTHER PTHR11879:SF11 1 395 1.5E-260 T 23-04-2016 VV93_RS09460 842b8b8cccf33c5dda7702ad65bf5afb 396 PANTHER PTHR11879 1 395 1.5E-260 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VV93_RS09460 842b8b8cccf33c5dda7702ad65bf5afb 396 Pfam PF00155 Aminotransferase class I and II 27 392 1.7E-82 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV93_RS09460 842b8b8cccf33c5dda7702ad65bf5afb 396 Gene3D G3DSA:3.40.640.10 45 315 8.2E-106 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS09460 842b8b8cccf33c5dda7702ad65bf5afb 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 9.9E-38 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VV93_RS09460 842b8b8cccf33c5dda7702ad65bf5afb 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 9.9E-38 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VV93_RS09460 842b8b8cccf33c5dda7702ad65bf5afb 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 9.9E-38 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VV93_RS09460 842b8b8cccf33c5dda7702ad65bf5afb 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 9.9E-38 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VV93_RS09460 842b8b8cccf33c5dda7702ad65bf5afb 396 SUPERFAMILY SSF53383 1 395 1.33E-113 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS09460 842b8b8cccf33c5dda7702ad65bf5afb 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 Pfam PF12836 Helix-hairpin-helix motif 491 555 7.5E-28 T 23-04-2016 VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 SMART SM00732 326 424 6.5E-40 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 SUPERFAMILY SSF53098 322 469 3.72E-53 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 Gene3D G3DSA:3.30.420.140 327 450 3.0E-54 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 Gene3D G3DSA:1.10.3500.10 451 498 3.7E-102 T 23-04-2016 IPR023323 Tex-like domain VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 Gene3D G3DSA:1.10.3500.10 110 322 3.7E-102 T 23-04-2016 IPR023323 Tex-like domain VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 Pfam PF00575 S1 RNA binding domain 648 720 2.2E-21 T 23-04-2016 IPR003029 S1 domain GO:0003676 VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 Pfam PF16921 Tex protein YqgF-like domain 327 451 2.8E-56 T 23-04-2016 IPR032639 Tex protein, YqgF-like domain VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 Pfam PF09371 Tex-like protein N-terminal domain 9 193 7.8E-71 T 23-04-2016 IPR018974 Tex-like protein, N-terminal VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 Gene3D G3DSA:2.40.50.140 633 722 3.6E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 SMART SM00316 649 720 3.1E-25 T 23-04-2016 IPR022967 RNA-binding domain, S1 VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 SUPERFAMILY SSF50249 638 724 6.34E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 PANTHER PTHR10724:SF1 1 750 0.0 T 23-04-2016 VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 PANTHER PTHR10724 1 750 0.0 T 23-04-2016 VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 SUPERFAMILY SSF47781 560 632 1.16E-18 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 SUPERFAMILY SSF158832 3 321 3.14E-119 T 23-04-2016 VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 Gene3D G3DSA:1.10.10.650 1 109 2.4E-47 T 23-04-2016 IPR023319 Tex-like protein, HTH domain VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 SUPERFAMILY SSF47781 470 557 1.33E-27 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VV93_RS01140 4fa20a54d554d838faa0781c3b003673 774 Gene3D G3DSA:1.10.150.310 499 630 2.2E-45 T 23-04-2016 IPR023097 Tex RuvX-like domain VV93_RS14895 5049ba11bf498f25cb7ee4e9d33f6821 386 Gene3D G3DSA:1.20.1250.20 192 374 6.0E-8 T 23-04-2016 VV93_RS14895 5049ba11bf498f25cb7ee4e9d33f6821 386 PANTHER PTHR23502:SF19 1 378 1.4E-110 T 23-04-2016 VV93_RS14895 5049ba11bf498f25cb7ee4e9d33f6821 386 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 348 2.0E-68 T 23-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 VV93_RS14895 5049ba11bf498f25cb7ee4e9d33f6821 386 Gene3D G3DSA:1.20.1250.20 2 184 5.9E-33 T 23-04-2016 VV93_RS14895 5049ba11bf498f25cb7ee4e9d33f6821 386 ProSitePatterns PS00216 Sugar transport proteins signature 1. 54 70 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VV93_RS14895 5049ba11bf498f25cb7ee4e9d33f6821 386 SUPERFAMILY SSF103473 2 372 9.68E-59 T 23-04-2016 IPR020846 Major facilitator superfamily domain VV93_RS14895 5049ba11bf498f25cb7ee4e9d33f6821 386 Pfam PF07690 Major Facilitator Superfamily 5 341 5.0E-48 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV93_RS14895 5049ba11bf498f25cb7ee4e9d33f6821 386 PANTHER PTHR23502 1 378 1.4E-110 T 23-04-2016 VV93_RS05390 28a3f877dcf7332a62b082e0eb58c814 355 Gene3D G3DSA:2.40.50.100 58 91 3.3E-15 T 23-04-2016 VV93_RS05390 28a3f877dcf7332a62b082e0eb58c814 355 Gene3D G3DSA:2.40.50.100 152 183 3.3E-15 T 23-04-2016 VV93_RS05390 28a3f877dcf7332a62b082e0eb58c814 355 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 338 7.5E-86 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VV93_RS05390 28a3f877dcf7332a62b082e0eb58c814 355 PANTHER PTHR30469:SF13 7 353 1.2E-187 T 23-04-2016 VV93_RS05390 28a3f877dcf7332a62b082e0eb58c814 355 PANTHER PTHR30469 7 353 1.2E-187 T 23-04-2016 VV93_RS05390 28a3f877dcf7332a62b082e0eb58c814 355 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 257 8.0E-31 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV93_RS05390 28a3f877dcf7332a62b082e0eb58c814 355 SUPERFAMILY SSF111369 47 262 1.7E-37 T 23-04-2016 VV93_RS09395 ee808f144601467ed18e844e7821cd5c 571 PANTHER PTHR33121 360 567 8.3E-37 T 23-04-2016 VV93_RS09395 ee808f144601467ed18e844e7821cd5c 571 SMART SM00052 343 571 6.5E-15 T 23-04-2016 IPR001633 EAL domain VV93_RS09395 ee808f144601467ed18e844e7821cd5c 571 PANTHER PTHR33121:SF13 360 567 8.3E-37 T 23-04-2016 VV93_RS09395 ee808f144601467ed18e844e7821cd5c 571 SUPERFAMILY SSF141868 353 567 4.58E-47 T 23-04-2016 IPR001633 EAL domain VV93_RS09395 ee808f144601467ed18e844e7821cd5c 571 Pfam PF00563 EAL domain 357 567 4.3E-41 T 23-04-2016 IPR001633 EAL domain VV93_RS09395 ee808f144601467ed18e844e7821cd5c 571 Gene3D G3DSA:3.20.20.450 356 567 1.7E-43 T 23-04-2016 IPR001633 EAL domain VV93_RS10500 167efaeb5db1b141d87198f00a25229c 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.8E-13 T 23-04-2016 VV93_RS10500 167efaeb5db1b141d87198f00a25229c 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.8E-13 T 23-04-2016 VV93_RS10500 167efaeb5db1b141d87198f00a25229c 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 1.8E-13 T 23-04-2016 VV93_RS10500 167efaeb5db1b141d87198f00a25229c 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.8E-13 T 23-04-2016 VV93_RS10500 167efaeb5db1b141d87198f00a25229c 429 PANTHER PTHR22912:SF140 203 313 8.7E-23 T 23-04-2016 VV93_RS10500 167efaeb5db1b141d87198f00a25229c 429 SUPERFAMILY SSF51905 3 219 2.59E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS10500 167efaeb5db1b141d87198f00a25229c 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 7.7E-7 T 23-04-2016 VV93_RS10500 167efaeb5db1b141d87198f00a25229c 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 7.7E-7 T 23-04-2016 VV93_RS10500 167efaeb5db1b141d87198f00a25229c 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 7.7E-7 T 23-04-2016 VV93_RS10500 167efaeb5db1b141d87198f00a25229c 429 PANTHER PTHR22912 203 313 8.7E-23 T 23-04-2016 VV93_RS10500 167efaeb5db1b141d87198f00a25229c 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 7.1E-62 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS10500 167efaeb5db1b141d87198f00a25229c 429 Gene3D G3DSA:3.50.50.60 3 121 1.0E-18 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS10500 167efaeb5db1b141d87198f00a25229c 429 PANTHER PTHR22912 2 187 8.7E-23 T 23-04-2016 VV93_RS10500 167efaeb5db1b141d87198f00a25229c 429 SUPERFAMILY SSF51905 165 347 3.42E-25 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS10500 167efaeb5db1b141d87198f00a25229c 429 Gene3D G3DSA:3.50.50.60 122 341 5.4E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS10500 167efaeb5db1b141d87198f00a25229c 429 PANTHER PTHR22912:SF140 2 187 8.7E-23 T 23-04-2016 VV93_RS11285 7a4c2e2f2707602d7234eb75c1a4542a 403 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 5.3E-67 T 23-04-2016 IPR018642 Protein of unknown function DUF2066 VV93_RS14625 2e1501f420d07fd9941fa08e7a817f78 355 PANTHER PTHR21091:SF2 1 351 5.0E-162 T 23-04-2016 VV93_RS14625 2e1501f420d07fd9941fa08e7a817f78 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VV93_RS14625 2e1501f420d07fd9941fa08e7a817f78 355 Gene3D G3DSA:3.20.20.210 2 353 2.5E-154 T 23-04-2016 VV93_RS14625 2e1501f420d07fd9941fa08e7a817f78 355 PANTHER PTHR21091 1 351 5.0E-162 T 23-04-2016 VV93_RS14625 2e1501f420d07fd9941fa08e7a817f78 355 SUPERFAMILY SSF51726 1 354 1.38E-122 T 23-04-2016 VV93_RS14625 2e1501f420d07fd9941fa08e7a817f78 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 6.9E-140 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VV93_RS14625 2e1501f420d07fd9941fa08e7a817f78 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.539 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VV93_RS14625 2e1501f420d07fd9941fa08e7a817f78 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 1.9E-141 T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VV93_RS14625 2e1501f420d07fd9941fa08e7a817f78 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VV93_RS05015 97438856bfaf6c9181ab113fbfc6dcc5 390 PANTHER PTHR12124 11 366 1.6E-88 T 23-04-2016 VV93_RS05015 97438856bfaf6c9181ab113fbfc6dcc5 390 SUPERFAMILY SSF47819 212 320 8.94E-24 T 23-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 VV93_RS05015 97438856bfaf6c9181ab113fbfc6dcc5 390 SUPERFAMILY SSF53098 17 228 4.32E-71 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS05015 97438856bfaf6c9181ab113fbfc6dcc5 390 TIGRFAM TIGR01388 rnd: ribonuclease D 24 389 3.2E-142 T 23-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VV93_RS05015 97438856bfaf6c9181ab113fbfc6dcc5 390 Gene3D G3DSA:3.30.420.10 20 196 8.7E-19 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS05015 97438856bfaf6c9181ab113fbfc6dcc5 390 Pfam PF01612 3'-5' exonuclease 22 189 3.4E-42 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VV93_RS05015 97438856bfaf6c9181ab113fbfc6dcc5 390 Hamap MF_01899 Ribonuclease D [rnd]. 22 389 42.861 T 23-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VV93_RS05015 97438856bfaf6c9181ab113fbfc6dcc5 390 Pfam PF00570 HRDC domain 232 298 1.5E-10 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VV93_RS05015 97438856bfaf6c9181ab113fbfc6dcc5 390 SMART SM00474 22 190 5.3E-46 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VV93_RS05015 97438856bfaf6c9181ab113fbfc6dcc5 390 PANTHER PTHR12124:SF42 11 366 1.6E-88 T 23-04-2016 VV93_RS05015 97438856bfaf6c9181ab113fbfc6dcc5 390 SUPERFAMILY SSF47819 315 390 7.85E-20 T 23-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 VV93_RS01600 9eae5b8dfdbdeaf4c7dcba1a9174a92e 229 Gene3D G3DSA:3.90.550.10 1 228 5.6E-59 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS01600 9eae5b8dfdbdeaf4c7dcba1a9174a92e 229 SUPERFAMILY SSF53448 1 228 6.12E-56 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS01600 9eae5b8dfdbdeaf4c7dcba1a9174a92e 229 Pfam PF02348 Cytidylyltransferase 6 78 6.7E-20 T 23-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VV93_RS01600 9eae5b8dfdbdeaf4c7dcba1a9174a92e 229 PANTHER PTHR21485:SF20 5 225 1.3E-47 T 23-04-2016 VV93_RS01600 9eae5b8dfdbdeaf4c7dcba1a9174a92e 229 PANTHER PTHR21485 5 225 1.3E-47 T 23-04-2016 VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 SUPERFAMILY SSF53067 403 456 5.44E-22 T 23-04-2016 VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 SUPERFAMILY SSF53067 223 369 5.44E-22 T 23-04-2016 VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 PANTHER PTHR19375:SF226 44 69 1.3E-93 T 23-04-2016 VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 PANTHER PTHR19375:SF226 85 279 1.3E-93 T 23-04-2016 VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 PANTHER PTHR19375:SF226 6 23 1.3E-93 T 23-04-2016 VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 PANTHER PTHR19375:SF226 298 316 1.3E-93 T 23-04-2016 VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 Pfam PF12531 DNA-K related protein 685 932 4.9E-100 T 23-04-2016 IPR021030 Protein of unknown function DUF3731 VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 PRINTS PR00301 70kDa heat shock protein signature 398 418 3.3E-9 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 PRINTS PR00301 70kDa heat shock protein signature 6 19 3.3E-9 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 PRINTS PR00301 70kDa heat shock protein signature 232 242 3.3E-9 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 PRINTS PR00301 70kDa heat shock protein signature 165 185 3.3E-9 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 Gene3D G3DSA:3.30.420.40 5 227 2.3E-35 T 23-04-2016 VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 PANTHER PTHR19375 44 69 1.3E-93 T 23-04-2016 VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 PANTHER PTHR19375 85 279 1.3E-93 T 23-04-2016 VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 PANTHER PTHR19375 6 23 1.3E-93 T 23-04-2016 VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 PANTHER PTHR19375 298 316 1.3E-93 T 23-04-2016 VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 Pfam PF00012 Hsp70 protein 81 315 4.4E-18 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 SUPERFAMILY SSF53067 5 209 2.33E-31 T 23-04-2016 VV93_RS09090 772b5ee82aa91abe4498b7da018bef5d 935 Gene3D G3DSA:3.30.420.40 228 331 4.2E-17 T 23-04-2016 VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 Pfam PF00672 HAMP domain 323 392 3.6E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 SUPERFAMILY SSF47384 440 509 4.12E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 Pfam PF17202 Single cache domain 3 201 314 2.0E-26 T 23-04-2016 IPR033463 Single cache domain 3 VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 SMART SM00388 445 512 9.5E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 Gene3D G3DSA:3.30.565.10 498 667 1.9E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 PANTHER PTHR24423 441 664 1.2E-194 T 23-04-2016 VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 PANTHER PTHR24423 336 392 1.2E-194 T 23-04-2016 VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 PANTHER PTHR24423 1 280 1.2E-194 T 23-04-2016 VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 559 665 4.1E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 SMART SM00387 555 666 5.7E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 SUPERFAMILY SSF103190 141 307 1.35E-14 T 23-04-2016 IPR029151 Periplasmic sensor domain-like VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 SUPERFAMILY SSF55874 502 664 1.83E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 Pfam PF00512 His Kinase A (phospho-acceptor) domain 445 510 2.3E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 625 8.6E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 644 8.6E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 611 8.6E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 663 8.6E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 Gene3D G3DSA:1.10.287.130 441 497 2.7E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 PANTHER PTHR24423:SF532 441 664 1.2E-194 T 23-04-2016 VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 PANTHER PTHR24423:SF532 336 392 1.2E-194 T 23-04-2016 VV93_RS08165 36527e233c4f6942fe32370b2a91e8de 677 PANTHER PTHR24423:SF532 1 280 1.2E-194 T 23-04-2016 VV93_RS07795 714a6a06178d9f2b17172d9d10ddf668 336 PANTHER PTHR11938 5 335 1.1E-99 T 23-04-2016 VV93_RS07795 714a6a06178d9f2b17172d9d10ddf668 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 VV93_RS07795 714a6a06178d9f2b17172d9d10ddf668 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 VV93_RS07795 714a6a06178d9f2b17172d9d10ddf668 336 PIRSF PIRSF000164 10 336 3.5E-107 T 23-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 VV93_RS07795 714a6a06178d9f2b17172d9d10ddf668 336 SUPERFAMILY SSF51395 1 336 1.23E-105 T 23-04-2016 VV93_RS07795 714a6a06178d9f2b17172d9d10ddf668 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 50.562 T 23-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VV93_RS07795 714a6a06178d9f2b17172d9d10ddf668 336 Gene3D G3DSA:3.20.20.70 1 336 2.8E-126 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS07795 714a6a06178d9f2b17172d9d10ddf668 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 1.2E-88 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 VV93_RS07795 714a6a06178d9f2b17172d9d10ddf668 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.7E-145 T 23-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VV93_RS08120 ac4f8802b2e2fc3d1f280509098a4627 206 SUPERFAMILY SSF89155 3 193 2.62E-52 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VV93_RS08120 ac4f8802b2e2fc3d1f280509098a4627 206 PANTHER PTHR34227:SF4 1 199 3.8E-81 T 23-04-2016 VV93_RS08120 ac4f8802b2e2fc3d1f280509098a4627 206 PANTHER PTHR34227 1 199 3.8E-81 T 23-04-2016 VV93_RS08120 ac4f8802b2e2fc3d1f280509098a4627 206 Pfam PF02613 Nitrate reductase delta subunit 42 155 5.7E-31 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VV93_RS08120 ac4f8802b2e2fc3d1f280509098a4627 206 Gene3D G3DSA:1.10.3480.10 3 188 1.6E-50 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 8.5E-77 T 23-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 5.2E-27 T 23-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 SMART SM00663 235 514 1.1E-184 T 23-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 5.8E-88 T 23-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 588 32.344 T 23-04-2016 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 PANTHER PTHR19376:SF32 962 1157 0.0 T 23-04-2016 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.4E-8 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 Gene3D G3DSA:2.40.40.20 417 489 2.5E-37 T 23-04-2016 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 Gene3D G3DSA:2.40.40.20 349 376 2.5E-37 T 23-04-2016 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 PANTHER PTHR19376 962 1157 0.0 T 23-04-2016 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1375 10.457 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 PANTHER PTHR19376:SF32 570 943 0.0 T 23-04-2016 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 SUPERFAMILY SSF64484 1133 1362 0.0 T 23-04-2016 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 SUPERFAMILY SSF64484 16 944 0.0 T 23-04-2016 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 5.1E-19 T 23-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 PANTHER PTHR19376 570 943 0.0 T 23-04-2016 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 PANTHER PTHR19376 4 551 0.0 T 23-04-2016 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 PANTHER PTHR19376 1302 1379 0.0 T 23-04-2016 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 PANTHER PTHR19376 1176 1261 0.0 T 23-04-2016 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 PANTHER PTHR19376:SF32 4 551 0.0 T 23-04-2016 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 PANTHER PTHR19376:SF32 1302 1379 0.0 T 23-04-2016 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 PANTHER PTHR19376:SF32 1176 1261 0.0 T 23-04-2016 VV93_RS14650 db0f23d854db8ad77d704d80793993d2 1400 Gene3D G3DSA:2.40.50.100 1156 1209 1.7E-7 T 23-04-2016 VV93_RS01450 8f89569c30e67d121d318de6fb060c39 555 SUPERFAMILY SSF58104 246 555 3.4E-72 T 23-04-2016 VV93_RS01450 8f89569c30e67d121d318de6fb060c39 555 Pfam PF00672 HAMP domain 207 274 6.5E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS01450 8f89569c30e67d121d318de6fb060c39 555 Gene3D G3DSA:3.30.450.20 36 183 4.1E-48 T 23-04-2016 VV93_RS01450 8f89569c30e67d121d318de6fb060c39 555 Pfam PF17200 Single Cache domain 2 45 188 8.7E-39 T 23-04-2016 IPR033480 Single Cache domain 2 VV93_RS01450 8f89569c30e67d121d318de6fb060c39 555 SMART SM00283 282 554 1.0E-54 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS01450 8f89569c30e67d121d318de6fb060c39 555 SMART SM00304 224 278 2.5E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS01450 8f89569c30e67d121d318de6fb060c39 555 PANTHER PTHR32089:SF55 64 555 1.6E-208 T 23-04-2016 VV93_RS01450 8f89569c30e67d121d318de6fb060c39 555 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 355 553 1.1E-42 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS01450 8f89569c30e67d121d318de6fb060c39 555 SMART SM01049 42 131 1.1E-32 T 23-04-2016 IPR033480 Single Cache domain 2 VV93_RS01450 8f89569c30e67d121d318de6fb060c39 555 Gene3D G3DSA:1.10.287.950 311 525 5.4E-54 T 23-04-2016 VV93_RS01450 8f89569c30e67d121d318de6fb060c39 555 PANTHER PTHR32089 64 555 1.6E-208 T 23-04-2016 VV93_RS12030 3d509c9eef7d4035ba5c19581915bb87 307 PANTHER PTHR30537 1 307 3.5E-75 T 23-04-2016 VV93_RS12030 3d509c9eef7d4035ba5c19581915bb87 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 5.5E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS12030 3d509c9eef7d4035ba5c19581915bb87 307 Pfam PF03466 LysR substrate binding domain 94 287 1.0E-22 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS12030 3d509c9eef7d4035ba5c19581915bb87 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.7E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS12030 3d509c9eef7d4035ba5c19581915bb87 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.7E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS12030 3d509c9eef7d4035ba5c19581915bb87 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.7E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS12030 3d509c9eef7d4035ba5c19581915bb87 307 Gene3D G3DSA:1.10.10.10 5 84 7.5E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS12030 3d509c9eef7d4035ba5c19581915bb87 307 SUPERFAMILY SSF53850 95 293 3.8E-27 T 23-04-2016 VV93_RS12030 3d509c9eef7d4035ba5c19581915bb87 307 SUPERFAMILY SSF46785 4 87 5.9E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS12030 3d509c9eef7d4035ba5c19581915bb87 307 Gene3D G3DSA:3.40.190.10 180 259 4.9E-12 T 23-04-2016 VV93_RS12030 3d509c9eef7d4035ba5c19581915bb87 307 Gene3D G3DSA:3.40.190.10 95 179 2.6E-26 T 23-04-2016 VV93_RS12030 3d509c9eef7d4035ba5c19581915bb87 307 PANTHER PTHR30537:SF26 1 307 3.5E-75 T 23-04-2016 VV93_RS12295 91599a36faeba755878ea1c9384f5160 138 PANTHER PTHR35813 1 137 2.7E-30 T 23-04-2016 VV93_RS12295 91599a36faeba755878ea1c9384f5160 138 Pfam PF04304 Protein of unknown function (DUF454) 17 129 6.1E-33 T 23-04-2016 IPR007401 Protein of unknown function DUF454 VV93_RS12295 91599a36faeba755878ea1c9384f5160 138 PIRSF PIRSF016789 13 135 9.0E-32 T 23-04-2016 IPR007401 Protein of unknown function DUF454 VV93_RS12295 91599a36faeba755878ea1c9384f5160 138 PANTHER PTHR35813:SF1 1 137 2.7E-30 T 23-04-2016 VV93_RS01440 bfbe64a7711768ed2af6878b360b1116 196 PANTHER PTHR30055:SF58 6 191 2.6E-112 T 23-04-2016 VV93_RS01440 bfbe64a7711768ed2af6878b360b1116 196 SUPERFAMILY SSF46689 5 78 4.03E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS01440 bfbe64a7711768ed2af6878b360b1116 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 58 6.9E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV93_RS01440 bfbe64a7711768ed2af6878b360b1116 196 SUPERFAMILY SSF48498 81 191 1.73E-10 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VV93_RS01440 bfbe64a7711768ed2af6878b360b1116 196 PANTHER PTHR30055 6 191 2.6E-112 T 23-04-2016 VV93_RS01440 bfbe64a7711768ed2af6878b360b1116 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.159 T 23-04-2016 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 VV93_RS01440 bfbe64a7711768ed2af6878b360b1116 196 Gene3D G3DSA:1.10.357.10 5 192 9.7E-40 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VV93_RS07480 f8cd2ceec354cd7bfb7c3845c80d4b3f 401 PANTHER PTHR30085 259 401 9.8E-167 T 23-04-2016 VV93_RS07480 f8cd2ceec354cd7bfb7c3845c80d4b3f 401 PANTHER PTHR30085 1 180 9.8E-167 T 23-04-2016 VV93_RS07480 f8cd2ceec354cd7bfb7c3845c80d4b3f 401 Gene3D G3DSA:1.10.3720.10 267 396 1.7E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS07480 f8cd2ceec354cd7bfb7c3845c80d4b3f 401 Gene3D G3DSA:1.10.3720.10 90 186 1.7E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS07480 f8cd2ceec354cd7bfb7c3845c80d4b3f 401 SUPERFAMILY SSF161098 194 382 2.22E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS07480 f8cd2ceec354cd7bfb7c3845c80d4b3f 401 SUPERFAMILY SSF161098 92 160 7.03E-12 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS07480 f8cd2ceec354cd7bfb7c3845c80d4b3f 401 PANTHER PTHR30085:SF1 259 401 9.8E-167 T 23-04-2016 VV93_RS07480 f8cd2ceec354cd7bfb7c3845c80d4b3f 401 PANTHER PTHR30085:SF1 1 180 9.8E-167 T 23-04-2016 VV93_RS07480 f8cd2ceec354cd7bfb7c3845c80d4b3f 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 92 155 1.2E-16 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VV93_RS07480 f8cd2ceec354cd7bfb7c3845c80d4b3f 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 396 4.4E-8 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 SUPERFAMILY SSF50800 74 169 7.15E-25 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 SUPERFAMILY SSF51621 171 345 9.81E-86 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 SUPERFAMILY SSF51621 4 79 9.81E-86 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 PRINTS PR01050 Pyruvate kinase family signature 250 274 2.2E-55 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 PRINTS PR01050 Pyruvate kinase family signature 63 79 2.2E-55 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 PRINTS PR01050 Pyruvate kinase family signature 275 299 2.2E-55 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 PRINTS PR01050 Pyruvate kinase family signature 300 318 2.2E-55 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 PRINTS PR01050 Pyruvate kinase family signature 190 204 2.2E-55 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 PRINTS PR01050 Pyruvate kinase family signature 223 249 2.2E-55 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 PRINTS PR01050 Pyruvate kinase family signature 319 335 2.2E-55 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 PANTHER PTHR11817:SF17 5 482 2.3E-296 T 23-04-2016 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 Gene3D G3DSA:2.40.33.10 77 170 3.6E-27 T 23-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 23-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 SUPERFAMILY SSF52935 329 480 1.09E-37 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 4.4E-130 T 23-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 PANTHER PTHR11817 5 482 2.3E-296 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 3.7E-167 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 Gene3D G3DSA:3.40.1380.20 332 480 3.1E-39 T 23-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 3.4E-28 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 Gene3D G3DSA:3.20.20.60 172 331 4.3E-94 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS06205 cdb63c039a02f31e1940b41f21752b3a 482 Gene3D G3DSA:3.20.20.60 6 76 4.3E-94 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS11545 008ece2645d5238365b8e2db5173828a 86 PRINTS PR01249 Ribosomal protein L31 signature 45 60 5.6E-17 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS11545 008ece2645d5238365b8e2db5173828a 86 PRINTS PR01249 Ribosomal protein L31 signature 60 78 5.6E-17 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS11545 008ece2645d5238365b8e2db5173828a 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.6E-17 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS11545 008ece2645d5238365b8e2db5173828a 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 6.5E-19 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS11545 008ece2645d5238365b8e2db5173828a 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS11545 008ece2645d5238365b8e2db5173828a 86 PANTHER PTHR33280:SF3 1 81 3.5E-42 T 23-04-2016 VV93_RS11545 008ece2645d5238365b8e2db5173828a 86 PANTHER PTHR33280 1 81 3.5E-42 T 23-04-2016 VV93_RS11545 008ece2645d5238365b8e2db5173828a 86 SUPERFAMILY SSF143800 1 81 2.59E-23 T 23-04-2016 VV93_RS11545 008ece2645d5238365b8e2db5173828a 86 Pfam PF01197 Ribosomal protein L31 1 79 1.7E-27 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS11545 008ece2645d5238365b8e2db5173828a 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 29.093 T 23-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS17045 f21533cf3387ddc00767819650704403 469 SUPERFAMILY SSF116726 172 249 9.55E-17 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS17045 f21533cf3387ddc00767819650704403 469 PANTHER PTHR10283:SF79 303 330 1.2E-41 T 23-04-2016 VV93_RS17045 f21533cf3387ddc00767819650704403 469 Pfam PF02080 TrkA-C domain 175 242 6.3E-12 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS17045 f21533cf3387ddc00767819650704403 469 Pfam PF02080 TrkA-C domain 259 315 9.7E-12 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS17045 f21533cf3387ddc00767819650704403 469 SUPERFAMILY SSF116726 256 315 9.02E-14 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS17045 f21533cf3387ddc00767819650704403 469 Pfam PF03600 Citrate transporter 9 468 3.1E-22 T 23-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 VV93_RS17045 f21533cf3387ddc00767819650704403 469 PANTHER PTHR10283 378 465 1.2E-41 T 23-04-2016 VV93_RS17045 f21533cf3387ddc00767819650704403 469 Gene3D G3DSA:3.30.70.1450 256 315 1.7E-15 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS17045 f21533cf3387ddc00767819650704403 469 Gene3D G3DSA:3.30.70.1450 173 252 6.9E-18 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS17045 f21533cf3387ddc00767819650704403 469 PANTHER PTHR10283 17 226 1.2E-41 T 23-04-2016 VV93_RS17045 f21533cf3387ddc00767819650704403 469 PANTHER PTHR10283 303 330 1.2E-41 T 23-04-2016 VV93_RS17045 f21533cf3387ddc00767819650704403 469 PANTHER PTHR10283:SF79 378 465 1.2E-41 T 23-04-2016 VV93_RS17045 f21533cf3387ddc00767819650704403 469 PANTHER PTHR10283:SF79 17 226 1.2E-41 T 23-04-2016 VV93_RS00930 a93bf8291e55b6ab6bf3f0c100991dd6 256 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 253 4.8E-73 T 23-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 VV93_RS00930 a93bf8291e55b6ab6bf3f0c100991dd6 256 PANTHER PTHR10060 1 256 9.2E-156 T 23-04-2016 IPR001130 TatD family GO:0016788 VV93_RS00930 a93bf8291e55b6ab6bf3f0c100991dd6 256 PANTHER PTHR10060:SF21 1 256 9.2E-156 T 23-04-2016 VV93_RS00930 a93bf8291e55b6ab6bf3f0c100991dd6 256 SUPERFAMILY SSF51556 1 252 3.41E-80 T 23-04-2016 IPR032466 Metal-dependent hydrolase VV93_RS00930 a93bf8291e55b6ab6bf3f0c100991dd6 256 Gene3D G3DSA:3.20.20.140 1 253 1.5E-79 T 23-04-2016 VV93_RS00930 a93bf8291e55b6ab6bf3f0c100991dd6 256 PIRSF PIRSF005902 1 256 1.9E-72 T 23-04-2016 IPR001130 TatD family GO:0016788 VV93_RS00930 a93bf8291e55b6ab6bf3f0c100991dd6 256 Pfam PF01026 TatD related DNase 2 252 2.8E-68 T 23-04-2016 IPR001130 TatD family GO:0016788 VV93_RS07410 2abaf5381c5883b2fa42533a96406710 231 PIRSF PIRSF006293 1 223 9.4E-82 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VV93_RS07410 2abaf5381c5883b2fa42533a96406710 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 1.2E-85 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VV93_RS07410 2abaf5381c5883b2fa42533a96406710 231 PANTHER PTHR11587 1 212 3.1E-101 T 23-04-2016 VV93_RS07410 2abaf5381c5883b2fa42533a96406710 231 SUPERFAMILY SSF52402 1 211 1.59E-66 T 23-04-2016 VV93_RS07410 2abaf5381c5883b2fa42533a96406710 231 Gene3D G3DSA:3.40.50.620 1 212 1.2E-82 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS07410 2abaf5381c5883b2fa42533a96406710 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 1.3E-82 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VV93_RS07410 2abaf5381c5883b2fa42533a96406710 231 PANTHER PTHR11587:SF3 1 212 3.1E-101 T 23-04-2016 VV93_RS07410 2abaf5381c5883b2fa42533a96406710 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 50.311 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 8.2E-222 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 Gene3D G3DSA:1.10.287.380 878 945 6.0E-6 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 949 16.071 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 884 944 3.3E-19 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 Gene3D G3DSA:3.90.740.10 194 360 1.1E-47 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 PANTHER PTHR11946 608 860 0.0 T 23-04-2016 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 PANTHER PTHR11946 1 314 0.0 T 23-04-2016 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 PANTHER PTHR11946 880 944 0.0 T 23-04-2016 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 PANTHER PTHR11946 333 570 0.0 T 23-04-2016 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 SUPERFAMILY SSF50677 191 365 2.09E-58 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 8.4E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 8.4E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 8.4E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 8.4E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 8.4E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 PANTHER PTHR11946:SF5 608 860 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 PANTHER PTHR11946:SF5 1 314 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 PANTHER PTHR11946:SF5 880 944 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 PANTHER PTHR11946:SF5 333 570 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 SUPERFAMILY SSF52374 364 571 2.82E-135 T 23-04-2016 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 SUPERFAMILY SSF52374 1 192 2.82E-135 T 23-04-2016 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 SUPERFAMILY SSF52374 609 641 2.82E-135 T 23-04-2016 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 SUPERFAMILY SSF46589 884 948 6.8E-19 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 Gene3D G3DSA:3.40.50.620 3 193 3.5E-139 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 Gene3D G3DSA:3.40.50.620 609 630 3.5E-139 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 Gene3D G3DSA:3.40.50.620 364 571 3.5E-139 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 932 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 SUPERFAMILY SSF47323 642 898 2.06E-67 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 Gene3D G3DSA:1.10.730.10 631 816 7.0E-61 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS13375 3c6b7b453642ea3f3c4ca51104302029 951 Pfam PF08264 Anticodon-binding domain of tRNA 674 826 6.0E-40 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 VV93_RS14840 e8ae595b369e5858594b09431b90aa20 223 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 13 204 4.6E-62 T 23-04-2016 IPR003744 Protein of unknown function DUF165 VV93_RS14840 e8ae595b369e5858594b09431b90aa20 223 PANTHER PTHR34300 1 223 1.5E-131 T 23-04-2016 VV93_RS14840 e8ae595b369e5858594b09431b90aa20 223 Pfam PF02592 Putative vitamin uptake transporter 43 199 3.0E-38 T 23-04-2016 IPR003744 Protein of unknown function DUF165 VV93_RS14840 e8ae595b369e5858594b09431b90aa20 223 PANTHER PTHR34300:SF1 1 223 1.5E-131 T 23-04-2016 VV93_RS01015 9566908c94fe77aa5f22552ad1b93c35 313 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 20 296 23.94 T 23-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial VV93_RS01015 9566908c94fe77aa5f22552ad1b93c35 313 Pfam PF03631 Virulence factor BrkB 32 280 8.1E-58 T 23-04-2016 IPR017039 Virulence factor BrkB VV93_RS01015 9566908c94fe77aa5f22552ad1b93c35 313 PANTHER PTHR30213:SF0 7 288 3.4E-108 T 23-04-2016 VV93_RS01015 9566908c94fe77aa5f22552ad1b93c35 313 PANTHER PTHR30213 7 288 3.4E-108 T 23-04-2016 VV93_RS01015 9566908c94fe77aa5f22552ad1b93c35 313 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 21 279 2.8E-82 T 23-04-2016 IPR017039 Virulence factor BrkB VV93_RS01015 9566908c94fe77aa5f22552ad1b93c35 313 PIRSF PIRSF035875 7 300 1.9E-54 T 23-04-2016 IPR017039 Virulence factor BrkB VV93_RS03500 67ac29802760c54825739fc74699b996 400 SMART SM00020 24 315 2.3E-29 T 23-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VV93_RS03500 67ac29802760c54825739fc74699b996 400 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 136 150 7.0E-15 T 23-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV93_RS03500 67ac29802760c54825739fc74699b996 400 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 263 275 7.0E-15 T 23-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV93_RS03500 67ac29802760c54825739fc74699b996 400 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 52 67 7.0E-15 T 23-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV93_RS03500 67ac29802760c54825739fc74699b996 400 SUPERFAMILY SSF50494 36 319 2.54E-41 T 23-04-2016 IPR009003 Peptidase S1, PA clan VV93_RS03500 67ac29802760c54825739fc74699b996 400 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 378 398 1.4E-4 T 23-04-2016 IPR020008 GlyGly-CTERM domain VV93_RS03500 67ac29802760c54825739fc74699b996 400 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 264 275 - T 23-04-2016 IPR033116 Serine proteases, trypsin family, serine active site VV93_RS03500 67ac29802760c54825739fc74699b996 400 PANTHER PTHR24260:SF55 41 325 3.2E-33 T 23-04-2016 VV93_RS03500 67ac29802760c54825739fc74699b996 400 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 62 67 - T 23-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VV93_RS03500 67ac29802760c54825739fc74699b996 400 PANTHER PTHR24260 41 325 3.2E-33 T 23-04-2016 VV93_RS03500 67ac29802760c54825739fc74699b996 400 Pfam PF00089 Trypsin 36 315 9.2E-28 T 23-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VV93_RS03500 67ac29802760c54825739fc74699b996 400 Gene3D G3DSA:2.40.10.10 144 320 5.7E-23 T 23-04-2016 VV93_RS03500 67ac29802760c54825739fc74699b996 400 Gene3D G3DSA:2.40.10.10 49 143 4.9E-19 T 23-04-2016 VV93_RS08365 08709e2052f21d8aaf1e16025890a5bb 157 Pfam PF13673 Acetyltransferase (GNAT) domain 46 132 1.2E-11 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS08365 08709e2052f21d8aaf1e16025890a5bb 157 SUPERFAMILY SSF55729 17 137 6.69E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS08365 08709e2052f21d8aaf1e16025890a5bb 157 Gene3D G3DSA:3.40.630.30 7 135 7.0E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS00565 6c285cc91db329f1762b2ff5516a3668 225 SUPERFAMILY SSF52540 1 220 1.46E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00565 6c285cc91db329f1762b2ff5516a3668 225 SMART SM00382 27 214 6.0E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS00565 6c285cc91db329f1762b2ff5516a3668 225 PANTHER PTHR24220:SF470 3 221 3.4E-118 T 23-04-2016 VV93_RS00565 6c285cc91db329f1762b2ff5516a3668 225 PANTHER PTHR24220 3 221 3.4E-118 T 23-04-2016 VV93_RS00565 6c285cc91db329f1762b2ff5516a3668 225 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS00565 6c285cc91db329f1762b2ff5516a3668 225 Gene3D G3DSA:3.40.50.300 1 201 3.5E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00565 6c285cc91db329f1762b2ff5516a3668 225 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 3.6E-90 T 23-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 VV93_RS00565 6c285cc91db329f1762b2ff5516a3668 225 Pfam PF00005 ABC transporter 18 165 9.6E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS09025 f55a2420b71b36c53acc6d8b875d98d3 58 Pfam PF04964 Flp/Fap pilin component 5 52 1.5E-12 T 23-04-2016 IPR007047 Flp/Fap pilin component VV93_RS17280 7b8682e6e4083eae7039c9f92c1f290d 305 PANTHER PTHR30189 13 305 4.6E-50 T 23-04-2016 VV93_RS17280 7b8682e6e4083eae7039c9f92c1f290d 305 Pfam PF03968 OstA-like protein 4 61 1.7E-5 T 23-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal VV93_RS17280 7b8682e6e4083eae7039c9f92c1f290d 305 Pfam PF04453 Organic solvent tolerance protein 169 305 6.9E-40 T 23-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 VV93_RS04295 ceec95278a26740c99a9343278d00dbf 291 PANTHER PTHR22777:SF17 19 281 6.7E-115 T 23-04-2016 VV93_RS04295 ceec95278a26740c99a9343278d00dbf 291 SMART SM01091 203 281 3.6E-30 T 23-04-2016 IPR005170 Transporter-associated domain VV93_RS04295 ceec95278a26740c99a9343278d00dbf 291 Gene3D G3DSA:3.10.580.10 53 194 4.3E-25 T 23-04-2016 VV93_RS04295 ceec95278a26740c99a9343278d00dbf 291 SUPERFAMILY SSF54631 57 199 1.95E-33 T 23-04-2016 VV93_RS04295 ceec95278a26740c99a9343278d00dbf 291 SMART SM00116 76 125 0.19 T 23-04-2016 IPR000644 CBS domain VV93_RS04295 ceec95278a26740c99a9343278d00dbf 291 SMART SM00116 139 187 0.025 T 23-04-2016 IPR000644 CBS domain VV93_RS04295 ceec95278a26740c99a9343278d00dbf 291 Gene3D G3DSA:3.30.465.10 195 281 1.5E-30 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VV93_RS04295 ceec95278a26740c99a9343278d00dbf 291 Pfam PF00571 CBS domain 67 124 2.2E-7 T 23-04-2016 IPR000644 CBS domain VV93_RS04295 ceec95278a26740c99a9343278d00dbf 291 Pfam PF00571 CBS domain 137 187 2.4E-6 T 23-04-2016 IPR000644 CBS domain VV93_RS04295 ceec95278a26740c99a9343278d00dbf 291 Pfam PF03471 Transporter associated domain 204 279 8.0E-22 T 23-04-2016 IPR005170 Transporter-associated domain VV93_RS04295 ceec95278a26740c99a9343278d00dbf 291 SUPERFAMILY SSF56176 201 282 2.64E-23 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VV93_RS04295 ceec95278a26740c99a9343278d00dbf 291 PANTHER PTHR22777 19 281 6.7E-115 T 23-04-2016 VV93_RS02585 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 23-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS02585 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VV93_RS02585 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VV93_RS02585 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VV93_RS02585 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VV93_RS02585 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VV93_RS02585 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VV93_RS02585 82b2ecb72009aa2f24cf802a13d14316 71 PANTHER PTHR21109 1 71 1.3E-26 T 23-04-2016 VV93_RS02585 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VV93_RS02585 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 3.6E-23 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VV93_RS05645 73382ebc176d9d158230716e0baf8fc4 112 Pfam PF00462 Glutaredoxin 16 80 3.4E-17 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VV93_RS05645 73382ebc176d9d158230716e0baf8fc4 112 PANTHER PTHR10293 1 112 1.7E-58 T 23-04-2016 IPR004480 Monothiol glutaredoxin-related VV93_RS05645 73382ebc176d9d158230716e0baf8fc4 112 PIRSF PIRSF005894 1 107 3.0E-52 T 23-04-2016 IPR014434 Monothiol glutaredoxin VV93_RS05645 73382ebc176d9d158230716e0baf8fc4 112 SUPERFAMILY SSF52833 1 104 2.53E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS05645 73382ebc176d9d158230716e0baf8fc4 112 Gene3D G3DSA:3.40.30.10 7 102 8.1E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS05645 73382ebc176d9d158230716e0baf8fc4 112 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 2.7E-46 T 23-04-2016 IPR004480 Monothiol glutaredoxin-related VV93_RS04910 017fe796f8533c02ba628652a27d8e24 402 PANTHER PTHR23151 3 402 1.0E-242 T 23-04-2016 VV93_RS04910 017fe796f8533c02ba628652a27d8e24 402 Pfam PF02817 e3 binding domain 113 146 2.2E-12 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VV93_RS04910 017fe796f8533c02ba628652a27d8e24 402 SUPERFAMILY SSF52777 172 401 2.22E-89 T 23-04-2016 VV93_RS04910 017fe796f8533c02ba628652a27d8e24 402 Gene3D G3DSA:2.40.50.100 1 96 4.3E-25 T 23-04-2016 VV93_RS04910 017fe796f8533c02ba628652a27d8e24 402 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VV93_RS04910 017fe796f8533c02ba628652a27d8e24 402 SUPERFAMILY SSF47005 106 149 1.23E-11 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VV93_RS04910 017fe796f8533c02ba628652a27d8e24 402 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 402 4.5E-186 T 23-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 VV93_RS04910 017fe796f8533c02ba628652a27d8e24 402 SUPERFAMILY SSF51230 1 96 5.5E-24 T 23-04-2016 IPR011053 Single hybrid motif VV93_RS04910 017fe796f8533c02ba628652a27d8e24 402 PANTHER PTHR23151:SF47 3 402 1.0E-242 T 23-04-2016 VV93_RS04910 017fe796f8533c02ba628652a27d8e24 402 Gene3D G3DSA:3.30.559.10 162 400 3.7E-90 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain VV93_RS04910 017fe796f8533c02ba628652a27d8e24 402 Pfam PF00364 Biotin-requiring enzyme 4 76 1.0E-17 T 23-04-2016 IPR000089 Biotin/lipoyl attachment VV93_RS04910 017fe796f8533c02ba628652a27d8e24 402 Gene3D G3DSA:4.10.320.10 113 152 4.5E-20 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VV93_RS04910 017fe796f8533c02ba628652a27d8e24 402 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 172 400 2.5E-80 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 VV93_RS03000 cf5fa6a009932b9a53602d9529847a13 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 41.06 T 23-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA VV93_RS03000 cf5fa6a009932b9a53602d9529847a13 125 PIRSF PIRSF000378 2 125 4.9E-54 T 23-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA VV93_RS03000 cf5fa6a009932b9a53602d9529847a13 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 7.8E-69 T 23-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA VV93_RS03000 cf5fa6a009932b9a53602d9529847a13 125 Pfam PF01228 Glycine radical 15 106 1.4E-22 T 23-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 VV93_RS03000 cf5fa6a009932b9a53602d9529847a13 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 23-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VV93_RS03000 cf5fa6a009932b9a53602d9529847a13 125 PANTHER PTHR30191:SF5 1 125 4.7E-96 T 23-04-2016 VV93_RS03000 cf5fa6a009932b9a53602d9529847a13 125 SUPERFAMILY SSF51998 65 124 1.1E-23 T 23-04-2016 VV93_RS03000 cf5fa6a009932b9a53602d9529847a13 125 Gene3D G3DSA:3.20.70.20 60 124 1.2E-33 T 23-04-2016 VV93_RS03000 cf5fa6a009932b9a53602d9529847a13 125 PANTHER PTHR30191 1 125 4.7E-96 T 23-04-2016 VV93_RS12490 2b5e4453c878c7e42638551cd88fe835 301 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 9.9E-100 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VV93_RS12490 2b5e4453c878c7e42638551cd88fe835 301 Gene3D G3DSA:3.40.50.620 1 176 1.2E-77 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS12490 2b5e4453c878c7e42638551cd88fe835 301 PANTHER PTHR21299 1 294 2.6E-133 T 23-04-2016 VV93_RS12490 2b5e4453c878c7e42638551cd88fe835 301 PANTHER PTHR21299:SF1 1 294 2.6E-133 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VV93_RS12490 2b5e4453c878c7e42638551cd88fe835 301 SUPERFAMILY SSF52374 1 281 3.75E-105 T 23-04-2016 VV93_RS12490 2b5e4453c878c7e42638551cd88fe835 301 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.592 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VV93_RS12490 2b5e4453c878c7e42638551cd88fe835 301 Gene3D G3DSA:3.30.1300.10 177 288 8.9E-27 T 23-04-2016 VV93_RS12490 2b5e4453c878c7e42638551cd88fe835 301 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 9.4E-104 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VV93_RS12490 2b5e4453c878c7e42638551cd88fe835 301 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 62 6.6E-10 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VV93_RS03700 008f3f1139f6577cd06278a79b602964 203 PANTHER PTHR30353 3 202 2.5E-44 T 23-04-2016 IPR032818 DedA family VV93_RS03700 008f3f1139f6577cd06278a79b602964 203 PANTHER PTHR30353:SF2 3 202 2.5E-44 T 23-04-2016 VV93_RS03700 008f3f1139f6577cd06278a79b602964 203 Pfam PF09335 SNARE associated Golgi protein 39 159 2.7E-24 T 23-04-2016 IPR032816 SNARE associated Golgi protein VV93_RS02290 dc344f333fbb5b970a06292b25b56b8e 268 Gene3D G3DSA:3.40.50.150 8 197 1.7E-68 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS02290 dc344f333fbb5b970a06292b25b56b8e 268 PANTHER PTHR11727 1 266 1.0E-99 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VV93_RS02290 dc344f333fbb5b970a06292b25b56b8e 268 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 6.2E-88 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VV93_RS02290 dc344f333fbb5b970a06292b25b56b8e 268 Gene3D G3DSA:1.10.8.100 200 263 2.0E-23 T 23-04-2016 IPR023165 rRNA adenine dimethylase-like VV93_RS02290 dc344f333fbb5b970a06292b25b56b8e 268 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.382 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VV93_RS02290 dc344f333fbb5b970a06292b25b56b8e 268 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 23-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 VV93_RS02290 dc344f333fbb5b970a06292b25b56b8e 268 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 3.1E-77 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VV93_RS02290 dc344f333fbb5b970a06292b25b56b8e 268 SUPERFAMILY SSF53335 7 264 2.39E-79 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS02290 dc344f333fbb5b970a06292b25b56b8e 268 SMART SM00650 25 197 5.1E-89 T 23-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 VV93_RS12915 a3846118d4b13641d201c72059bbf292 410 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 4.8E-135 T 23-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 VV93_RS12915 a3846118d4b13641d201c72059bbf292 410 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 23-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 VV93_RS12915 a3846118d4b13641d201c72059bbf292 410 PANTHER PTHR13789:SF5 2 399 1.1E-159 T 23-04-2016 VV93_RS12915 a3846118d4b13641d201c72059bbf292 410 PANTHER PTHR13789 2 399 1.1E-159 T 23-04-2016 VV93_RS12915 a3846118d4b13641d201c72059bbf292 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.2E-19 T 23-04-2016 VV93_RS12915 a3846118d4b13641d201c72059bbf292 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.2E-19 T 23-04-2016 VV93_RS12915 a3846118d4b13641d201c72059bbf292 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.2E-19 T 23-04-2016 VV93_RS12915 a3846118d4b13641d201c72059bbf292 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.2E-19 T 23-04-2016 VV93_RS12915 a3846118d4b13641d201c72059bbf292 410 Gene3D G3DSA:3.30.9.10 170 217 2.2E-4 T 23-04-2016 VV93_RS12915 a3846118d4b13641d201c72059bbf292 410 SUPERFAMILY SSF51905 5 177 7.97E-60 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS12915 a3846118d4b13641d201c72059bbf292 410 SUPERFAMILY SSF51905 268 386 7.97E-60 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS12915 a3846118d4b13641d201c72059bbf292 410 Gene3D G3DSA:3.50.50.60 269 357 4.1E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS12915 a3846118d4b13641d201c72059bbf292 410 Gene3D G3DSA:3.50.50.60 4 169 4.1E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS12915 a3846118d4b13641d201c72059bbf292 410 Pfam PF01494 FAD binding domain 5 347 2.8E-27 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 VV93_RS09715 2236de8de35ebd9aebb870ecca26e21f 215 SUPERFAMILY SSF53639 1 212 6.67E-63 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal VV93_RS09715 2236de8de35ebd9aebb870ecca26e21f 215 PANTHER PTHR22789 1 215 1.7E-89 T 23-04-2016 VV93_RS09715 2236de8de35ebd9aebb870ecca26e21f 215 Gene3D G3DSA:3.40.225.10 3 210 1.1E-58 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal VV93_RS09715 2236de8de35ebd9aebb870ecca26e21f 215 TIGRFAM TIGR01086 fucA: L-fuculose phosphate aldolase 2 215 2.7E-134 T 23-04-2016 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197|UniPathway: UPA00563 VV93_RS09715 2236de8de35ebd9aebb870ecca26e21f 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 182 2.1E-43 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal VV93_RS09715 2236de8de35ebd9aebb870ecca26e21f 215 SMART SM01007 8 182 3.1E-60 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal VV93_RS09715 2236de8de35ebd9aebb870ecca26e21f 215 Hamap MF_00987 L-fuculose phosphate aldolase [fucA]. 1 215 56.43 T 23-04-2016 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197|UniPathway: UPA00563 VV93_RS09715 2236de8de35ebd9aebb870ecca26e21f 215 PANTHER PTHR22789:SF0 1 215 1.7E-89 T 23-04-2016 VV93_RS15150 3b7605cc4922fbc9783371e85385e3e4 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 23-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 VV93_RS15150 3b7605cc4922fbc9783371e85385e3e4 312 Pfam PF01063 Amino-transferase class IV 36 268 5.5E-47 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VV93_RS15150 3b7605cc4922fbc9783371e85385e3e4 312 PANTHER PTHR11825 1 306 2.6E-129 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VV93_RS15150 3b7605cc4922fbc9783371e85385e3e4 312 Gene3D G3DSA:3.30.470.10 7 130 7.2E-44 T 23-04-2016 VV93_RS15150 3b7605cc4922fbc9783371e85385e3e4 312 PANTHER PTHR11825:SF7 1 306 2.6E-129 T 23-04-2016 VV93_RS15150 3b7605cc4922fbc9783371e85385e3e4 312 Gene3D G3DSA:3.20.10.10 134 295 8.7E-59 T 23-04-2016 VV93_RS15150 3b7605cc4922fbc9783371e85385e3e4 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 1.5E-143 T 23-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 VV93_RS15150 3b7605cc4922fbc9783371e85385e3e4 312 SUPERFAMILY SSF56752 7 307 1.44E-103 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VV93_RS09495 e39e2688071dde0348c18fea5c4ef5bb 212 SMART SM00448 5 118 7.9E-32 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS09495 e39e2688071dde0348c18fea5c4ef5bb 212 SMART SM00421 148 205 5.6E-21 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS09495 e39e2688071dde0348c18fea5c4ef5bb 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 8.8E-18 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS09495 e39e2688071dde0348c18fea5c4ef5bb 212 PANTHER PTHR26402 5 211 1.0E-81 T 23-04-2016 VV93_RS09495 e39e2688071dde0348c18fea5c4ef5bb 212 PANTHER PTHR26402:SF151 5 211 1.0E-81 T 23-04-2016 VV93_RS09495 e39e2688071dde0348c18fea5c4ef5bb 212 SUPERFAMILY SSF52172 4 135 5.69E-36 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS09495 e39e2688071dde0348c18fea5c4ef5bb 212 Gene3D G3DSA:1.10.10.10 125 211 3.2E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS09495 e39e2688071dde0348c18fea5c4ef5bb 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 5.8E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS09495 e39e2688071dde0348c18fea5c4ef5bb 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 5.8E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS09495 e39e2688071dde0348c18fea5c4ef5bb 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 5.8E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS09495 e39e2688071dde0348c18fea5c4ef5bb 212 Pfam PF00072 Response regulator receiver domain 7 119 2.5E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS09495 e39e2688071dde0348c18fea5c4ef5bb 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS09495 e39e2688071dde0348c18fea5c4ef5bb 212 Gene3D G3DSA:3.40.50.2300 2 124 1.6E-37 T 23-04-2016 VV93_RS09495 e39e2688071dde0348c18fea5c4ef5bb 212 SUPERFAMILY SSF46894 139 211 1.29E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV93_RS10840 551f998f6e449c5e4708d33b9cf0d3a7 191 PANTHER PTHR30173 27 183 1.4E-51 T 23-04-2016 VV93_RS10840 551f998f6e449c5e4708d33b9cf0d3a7 191 PANTHER PTHR30173:SF6 27 183 1.4E-51 T 23-04-2016 VV93_RS10840 551f998f6e449c5e4708d33b9cf0d3a7 191 Pfam PF04542 Sigma-70 region 2 33 99 1.1E-17 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS10840 551f998f6e449c5e4708d33b9cf0d3a7 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 179 1.9E-22 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS10840 551f998f6e449c5e4708d33b9cf0d3a7 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 55 86 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS10840 551f998f6e449c5e4708d33b9cf0d3a7 191 SUPERFAMILY SSF88946 27 109 2.38E-21 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS10840 551f998f6e449c5e4708d33b9cf0d3a7 191 SUPERFAMILY SSF88659 120 180 3.18E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS10840 551f998f6e449c5e4708d33b9cf0d3a7 191 Gene3D G3DSA:1.10.1740.10 26 121 1.1E-22 T 23-04-2016 VV93_RS10840 551f998f6e449c5e4708d33b9cf0d3a7 191 Pfam PF08281 Sigma-70, region 4 123 175 5.7E-10 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS10840 551f998f6e449c5e4708d33b9cf0d3a7 191 Gene3D G3DSA:1.10.10.10 122 180 8.0E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS09855 551f998f6e449c5e4708d33b9cf0d3a7 191 PANTHER PTHR30173 27 183 1.4E-51 T 23-04-2016 VV93_RS09855 551f998f6e449c5e4708d33b9cf0d3a7 191 PANTHER PTHR30173:SF6 27 183 1.4E-51 T 23-04-2016 VV93_RS09855 551f998f6e449c5e4708d33b9cf0d3a7 191 Pfam PF04542 Sigma-70 region 2 33 99 1.1E-17 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS09855 551f998f6e449c5e4708d33b9cf0d3a7 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 179 1.9E-22 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS09855 551f998f6e449c5e4708d33b9cf0d3a7 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 55 86 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS09855 551f998f6e449c5e4708d33b9cf0d3a7 191 SUPERFAMILY SSF88946 27 109 2.38E-21 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS09855 551f998f6e449c5e4708d33b9cf0d3a7 191 SUPERFAMILY SSF88659 120 180 3.18E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS09855 551f998f6e449c5e4708d33b9cf0d3a7 191 Gene3D G3DSA:1.10.1740.10 26 121 1.1E-22 T 23-04-2016 VV93_RS09855 551f998f6e449c5e4708d33b9cf0d3a7 191 Pfam PF08281 Sigma-70, region 4 123 175 5.7E-10 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS09855 551f998f6e449c5e4708d33b9cf0d3a7 191 Gene3D G3DSA:1.10.10.10 122 180 8.0E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS11055 d0b6675b9eb387d7bd8ec0b1354ad371 487 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 466 486 2.5E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS11055 d0b6675b9eb387d7bd8ec0b1354ad371 487 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 466 2.5E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS11055 d0b6675b9eb387d7bd8ec0b1354ad371 487 SUPERFAMILY SSF52172 6 178 2.57E-5 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS11055 d0b6675b9eb387d7bd8ec0b1354ad371 487 PANTHER PTHR32071 1 487 4.1E-234 T 23-04-2016 VV93_RS11055 d0b6675b9eb387d7bd8ec0b1354ad371 487 SUPERFAMILY SSF46689 433 485 3.44E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS11055 d0b6675b9eb387d7bd8ec0b1354ad371 487 SUPERFAMILY SSF46689 348 391 3.44E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS11055 d0b6675b9eb387d7bd8ec0b1354ad371 487 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VV93_RS11055 d0b6675b9eb387d7bd8ec0b1354ad371 487 Pfam PF06490 Flagellar regulatory protein FleQ 6 114 3.9E-29 T 23-04-2016 IPR010518 Flagellar regulatory FleQ VV93_RS11055 d0b6675b9eb387d7bd8ec0b1354ad371 487 Gene3D G3DSA:3.40.50.300 133 308 1.3E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11055 d0b6675b9eb387d7bd8ec0b1354ad371 487 Gene3D G3DSA:1.10.10.60 425 485 2.1E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS11055 d0b6675b9eb387d7bd8ec0b1354ad371 487 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV93_RS11055 d0b6675b9eb387d7bd8ec0b1354ad371 487 PANTHER PTHR32071:SF36 1 487 4.1E-234 T 23-04-2016 VV93_RS11055 d0b6675b9eb387d7bd8ec0b1354ad371 487 Pfam PF02954 Bacterial regulatory protein, Fis family 443 483 2.3E-14 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS11055 d0b6675b9eb387d7bd8ec0b1354ad371 487 SMART SM00382 156 300 1.6E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS11055 d0b6675b9eb387d7bd8ec0b1354ad371 487 SUPERFAMILY SSF52540 136 377 7.29E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11055 d0b6675b9eb387d7bd8ec0b1354ad371 487 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 348 357 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VV93_RS11055 d0b6675b9eb387d7bd8ec0b1354ad371 487 Gene3D G3DSA:1.10.8.60 309 383 2.0E-22 T 23-04-2016 VV93_RS11055 d0b6675b9eb387d7bd8ec0b1354ad371 487 Pfam PF00158 Sigma-54 interaction domain 136 303 1.7E-73 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV93_RS14560 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.1E-44 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VV93_RS14560 2575495aef871798a88862dcd2069eba 98 PANTHER PTHR32071 19 98 4.2E-29 T 23-04-2016 VV93_RS14560 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 27 98 4.1E-27 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14560 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.9E-14 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS14560 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VV93_RS14560 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VV93_RS14560 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VV93_RS14560 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VV93_RS14560 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14560 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS14560 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS14560 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VV93_RS02295 59538be6e96ec4c60327374fec9d9177 328 PANTHER PTHR30004:SF5 1 327 3.1E-204 T 23-04-2016 VV93_RS02295 59538be6e96ec4c60327374fec9d9177 328 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 323 1.0E-126 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 VV93_RS02295 59538be6e96ec4c60327374fec9d9177 328 SUPERFAMILY SSF53659 3 326 3.52E-112 T 23-04-2016 VV93_RS02295 59538be6e96ec4c60327374fec9d9177 328 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 320 1.2E-106 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 VV93_RS02295 59538be6e96ec4c60327374fec9d9177 328 Gene3D G3DSA:3.40.718.10 3 327 3.5E-131 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VV93_RS02295 59538be6e96ec4c60327374fec9d9177 328 PANTHER PTHR30004 1 327 3.1E-204 T 23-04-2016 VV93_RS02295 59538be6e96ec4c60327374fec9d9177 328 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 324 35.415 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 VV93_RS11365 fb305dbff1f60079b3d6926e4e1d084e 252 PANTHER PTHR11935:SF7 2 252 3.3E-96 T 23-04-2016 VV93_RS11365 fb305dbff1f60079b3d6926e4e1d084e 252 SMART SM00849 12 166 5.7E-34 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS11365 fb305dbff1f60079b3d6926e4e1d084e 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 3.5E-26 T 23-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VV93_RS11365 fb305dbff1f60079b3d6926e4e1d084e 252 Gene3D G3DSA:3.60.15.10 4 252 1.3E-85 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS11365 fb305dbff1f60079b3d6926e4e1d084e 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 44.968 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VV93_RS11365 fb305dbff1f60079b3d6926e4e1d084e 252 PANTHER PTHR11935 2 252 3.3E-96 T 23-04-2016 VV93_RS11365 fb305dbff1f60079b3d6926e4e1d084e 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 2.2E-103 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VV93_RS11365 fb305dbff1f60079b3d6926e4e1d084e 252 SUPERFAMILY SSF56281 2 252 2.88E-70 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS11365 fb305dbff1f60079b3d6926e4e1d084e 252 PIRSF PIRSF005457 1 252 1.4E-97 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VV93_RS11365 fb305dbff1f60079b3d6926e4e1d084e 252 Pfam PF00753 Metallo-beta-lactamase superfamily 14 166 7.3E-20 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS08770 d18e9cbfc7ac06bad42529d3822fc3b5 295 PIRSF PIRSF006334 14 295 7.9E-113 T 23-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VV93_RS08770 d18e9cbfc7ac06bad42529d3822fc3b5 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 140 2.9E-12 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 VV93_RS08770 d18e9cbfc7ac06bad42529d3822fc3b5 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VV93_RS08770 d18e9cbfc7ac06bad42529d3822fc3b5 295 Gene3D G3DSA:3.40.140.10 33 177 9.5E-44 T 23-04-2016 VV93_RS08770 d18e9cbfc7ac06bad42529d3822fc3b5 295 SUPERFAMILY SSF53927 1 147 3.51E-41 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VV93_RS08770 d18e9cbfc7ac06bad42529d3822fc3b5 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 51.168 T 23-04-2016 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VV93_RS08770 d18e9cbfc7ac06bad42529d3822fc3b5 295 SUPERFAMILY SSF53927 152 290 9.89E-41 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VV93_RS08770 d18e9cbfc7ac06bad42529d3822fc3b5 295 PANTHER PTHR11644 20 288 1.2E-130 T 23-04-2016 VV93_RS08770 d18e9cbfc7ac06bad42529d3822fc3b5 295 Gene3D G3DSA:3.40.140.10 185 289 1.2E-26 T 23-04-2016 VV93_RS08770 d18e9cbfc7ac06bad42529d3822fc3b5 295 PANTHER PTHR11644:SF15 20 288 1.2E-130 T 23-04-2016 VV93_RS08770 d18e9cbfc7ac06bad42529d3822fc3b5 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 1.6E-44 T 23-04-2016 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VV93_RS08770 d18e9cbfc7ac06bad42529d3822fc3b5 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 295 7.8E-101 T 23-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VV93_RS12355 1e3b0098971ff9f1eb1913edb2990131 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 306 7.5E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS12355 1e3b0098971ff9f1eb1913edb2990131 341 Gene3D G3DSA:1.10.3720.10 93 296 6.0E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS12355 1e3b0098971ff9f1eb1913edb2990131 341 SUPERFAMILY SSF161098 96 287 1.1E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS12355 1e3b0098971ff9f1eb1913edb2990131 341 PANTHER PTHR30465 1 308 1.0E-99 T 23-04-2016 VV93_RS12355 1e3b0098971ff9f1eb1913edb2990131 341 PANTHER PTHR30465:SF2 1 308 1.0E-99 T 23-04-2016 VV93_RS00705 a403914d1959eab72d5dedce372054ab 606 Gene3D G3DSA:3.40.50.2300 472 589 3.3E-32 T 23-04-2016 VV93_RS00705 a403914d1959eab72d5dedce372054ab 606 SMART SM00387 343 456 3.4E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS00705 a403914d1959eab72d5dedce372054ab 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 2.65E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS00705 a403914d1959eab72d5dedce372054ab 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 2.65E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS00705 a403914d1959eab72d5dedce372054ab 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 2.65E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS00705 a403914d1959eab72d5dedce372054ab 606 PANTHER PTHR24423 23 31 3.7E-124 T 23-04-2016 VV93_RS00705 a403914d1959eab72d5dedce372054ab 606 PANTHER PTHR24423 209 589 3.7E-124 T 23-04-2016 VV93_RS00705 a403914d1959eab72d5dedce372054ab 606 SMART SM00448 475 587 1.1E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS00705 a403914d1959eab72d5dedce372054ab 606 SUPERFAMILY SSF52172 473 591 1.57E-31 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS00705 a403914d1959eab72d5dedce372054ab 606 Gene3D G3DSA:3.30.565.10 301 451 3.2E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS00705 a403914d1959eab72d5dedce372054ab 606 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 295 1.9E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS00705 a403914d1959eab72d5dedce372054ab 606 SUPERFAMILY SSF47384 216 296 1.31E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS00705 a403914d1959eab72d5dedce372054ab 606 Gene3D G3DSA:1.10.287.130 221 290 5.0E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS00705 a403914d1959eab72d5dedce372054ab 606 Pfam PF00072 Response regulator receiver domain 477 586 1.0E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS00705 a403914d1959eab72d5dedce372054ab 606 SMART SM00388 230 295 3.5E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS00705 a403914d1959eab72d5dedce372054ab 606 SUPERFAMILY SSF55874 284 449 6.55E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS00705 a403914d1959eab72d5dedce372054ab 606 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 451 4.0E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS12120 b0ff05d762042d052f02c10836268c71 362 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 329 1.3E-37 T 23-04-2016 IPR000160 GGDEF domain VV93_RS12120 b0ff05d762042d052f02c10836268c71 362 SUPERFAMILY SSF55073 182 333 5.89E-40 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS12120 b0ff05d762042d052f02c10836268c71 362 SMART SM00267 166 333 8.5E-49 T 23-04-2016 IPR000160 GGDEF domain VV93_RS12120 b0ff05d762042d052f02c10836268c71 362 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 175 333 1.4E-40 T 23-04-2016 IPR000160 GGDEF domain VV93_RS12120 b0ff05d762042d052f02c10836268c71 362 PANTHER PTHR10799 49 332 3.3E-22 T 23-04-2016 VV93_RS12120 b0ff05d762042d052f02c10836268c71 362 PANTHER PTHR10799:SF728 49 332 3.3E-22 T 23-04-2016 VV93_RS12120 b0ff05d762042d052f02c10836268c71 362 Gene3D G3DSA:3.30.70.270 179 335 2.9E-44 T 23-04-2016 VV93_RS14455 eaa2961bd7455094af793bf163dbf8fd 462 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 36 168 2.8E-60 T 23-04-2016 IPR032404 Two-component sensor protein CpxA, periplasmic domain VV93_RS14455 eaa2961bd7455094af793bf163dbf8fd 462 Gene3D G3DSA:1.10.287.130 234 291 6.3E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS14455 eaa2961bd7455094af793bf163dbf8fd 462 SMART SM00304 190 243 9.4E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS14455 eaa2961bd7455094af793bf163dbf8fd 462 SMART SM00388 244 306 6.4E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS14455 eaa2961bd7455094af793bf163dbf8fd 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 3.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS14455 eaa2961bd7455094af793bf163dbf8fd 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 3.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS14455 eaa2961bd7455094af793bf163dbf8fd 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 3.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS14455 eaa2961bd7455094af793bf163dbf8fd 462 SUPERFAMILY SSF55874 296 458 1.7E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS14455 eaa2961bd7455094af793bf163dbf8fd 462 PANTHER PTHR24423:SF553 184 462 5.7E-156 T 23-04-2016 VV93_RS14455 eaa2961bd7455094af793bf163dbf8fd 462 PANTHER PTHR24423:SF553 112 141 5.7E-156 T 23-04-2016 VV93_RS14455 eaa2961bd7455094af793bf163dbf8fd 462 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 304 3.4E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS14455 eaa2961bd7455094af793bf163dbf8fd 462 SUPERFAMILY SSF47384 230 305 1.96E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS14455 eaa2961bd7455094af793bf163dbf8fd 462 Pfam PF00672 HAMP domain 173 239 1.9E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS14455 eaa2961bd7455094af793bf163dbf8fd 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 458 2.2E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS14455 eaa2961bd7455094af793bf163dbf8fd 462 SMART SM00387 350 460 1.6E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS14455 eaa2961bd7455094af793bf163dbf8fd 462 Gene3D G3DSA:3.30.565.10 292 459 1.7E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS14455 eaa2961bd7455094af793bf163dbf8fd 462 PANTHER PTHR24423 184 462 5.7E-156 T 23-04-2016 VV93_RS14455 eaa2961bd7455094af793bf163dbf8fd 462 PANTHER PTHR24423 112 141 5.7E-156 T 23-04-2016 VV93_RS05610 33602241e0908a18bbb3a77908cb0f4e 179 Gene3D G3DSA:3.30.700.10 14 68 9.4E-7 T 23-04-2016 VV93_RS05610 33602241e0908a18bbb3a77908cb0f4e 179 PANTHER PTHR30093:SF7 7 67 2.3E-18 T 23-04-2016 VV93_RS05610 33602241e0908a18bbb3a77908cb0f4e 179 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 34 2.5E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS05610 33602241e0908a18bbb3a77908cb0f4e 179 SUPERFAMILY SSF54523 14 147 1.1E-13 T 23-04-2016 VV93_RS05610 33602241e0908a18bbb3a77908cb0f4e 179 Pfam PF13633 Prokaryotic N-terminal methylation site 12 35 6.0E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS05610 33602241e0908a18bbb3a77908cb0f4e 179 PANTHER PTHR30093 7 67 2.3E-18 T 23-04-2016 VV93_RS05610 33602241e0908a18bbb3a77908cb0f4e 179 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS10555 d1d08c5b9524ed1148f65652d1a0d610 138 SMART SM00116 80 127 5.2E-7 T 23-04-2016 IPR000644 CBS domain VV93_RS10555 d1d08c5b9524ed1148f65652d1a0d610 138 SMART SM00116 13 61 1.4 T 23-04-2016 IPR000644 CBS domain VV93_RS10555 d1d08c5b9524ed1148f65652d1a0d610 138 PANTHER PTHR11911 3 135 7.3E-23 T 23-04-2016 VV93_RS10555 d1d08c5b9524ed1148f65652d1a0d610 138 Gene3D G3DSA:3.10.580.10 1 132 2.8E-27 T 23-04-2016 VV93_RS10555 d1d08c5b9524ed1148f65652d1a0d610 138 SUPERFAMILY SSF54631 2 126 3.79E-30 T 23-04-2016 VV93_RS10555 d1d08c5b9524ed1148f65652d1a0d610 138 Pfam PF00571 CBS domain 6 61 5.5E-6 T 23-04-2016 IPR000644 CBS domain VV93_RS10555 d1d08c5b9524ed1148f65652d1a0d610 138 Pfam PF00571 CBS domain 73 126 1.3E-11 T 23-04-2016 IPR000644 CBS domain VV93_RS14825 7a5a6dbc823aa0a99beec5e9f72ab496 108 PIRSF PIRSF000077 2 108 1.8E-42 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VV93_RS14825 7a5a6dbc823aa0a99beec5e9f72ab496 108 SUPERFAMILY SSF52833 3 107 5.96E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS14825 7a5a6dbc823aa0a99beec5e9f72ab496 108 Pfam PF00085 Thioredoxin 5 106 9.9E-33 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 VV93_RS14825 7a5a6dbc823aa0a99beec5e9f72ab496 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VV93_RS14825 7a5a6dbc823aa0a99beec5e9f72ab496 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.9E-37 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VV93_RS14825 7a5a6dbc823aa0a99beec5e9f72ab496 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 23-04-2016 VV93_RS14825 7a5a6dbc823aa0a99beec5e9f72ab496 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 23-04-2016 VV93_RS14825 7a5a6dbc823aa0a99beec5e9f72ab496 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 23-04-2016 VV93_RS14825 7a5a6dbc823aa0a99beec5e9f72ab496 108 Gene3D G3DSA:3.40.30.10 2 107 3.0E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS14825 7a5a6dbc823aa0a99beec5e9f72ab496 108 PANTHER PTHR10438 3 108 2.3E-35 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VV93_RS09200 ed500105b3a4ecc0cfe648c7da1d0293 591 Gene3D G3DSA:3.40.50.300 335 565 2.4E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09200 ed500105b3a4ecc0cfe648c7da1d0293 591 PANTHER PTHR24221:SF256 5 579 1.9E-219 T 23-04-2016 VV93_RS09200 ed500105b3a4ecc0cfe648c7da1d0293 591 SMART SM00382 361 546 1.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS09200 ed500105b3a4ecc0cfe648c7da1d0293 591 Gene3D G3DSA:1.20.1560.10 7 321 1.7E-77 T 23-04-2016 VV93_RS09200 ed500105b3a4ecc0cfe648c7da1d0293 591 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS09200 ed500105b3a4ecc0cfe648c7da1d0293 591 SUPERFAMILY SSF52540 330 570 2.05E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09200 ed500105b3a4ecc0cfe648c7da1d0293 591 Pfam PF00664 ABC transporter transmembrane region 21 287 1.2E-45 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VV93_RS09200 ed500105b3a4ecc0cfe648c7da1d0293 591 PANTHER PTHR24221 5 579 1.9E-219 T 23-04-2016 VV93_RS09200 ed500105b3a4ecc0cfe648c7da1d0293 591 Pfam PF00005 ABC transporter 352 500 3.1E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS09200 ed500105b3a4ecc0cfe648c7da1d0293 591 SUPERFAMILY SSF90123 2 321 4.05E-74 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 Pfam PF01584 CheW-like domain 579 708 4.1E-22 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 Gene3D G3DSA:1.20.120.160 4 142 1.4E-42 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 433 572 4.5E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 326 385 1.6E-12 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 PANTHER PTHR22617 7 708 1.8E-167 T 23-04-2016 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 SMART SM00387 430 573 1.4E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 Gene3D G3DSA:2.40.50.180 597 661 4.4E-12 T 23-04-2016 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 SUPERFAMILY SSF50341 572 706 1.31E-28 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 527 5.2E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 570 5.2E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 489 5.2E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 551 5.2E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 Gene3D G3DSA:3.30.565.10 388 572 1.2E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 Gene3D G3DSA:2.30.30.40 573 594 3.5E-21 T 23-04-2016 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 Gene3D G3DSA:2.30.30.40 662 706 3.5E-21 T 23-04-2016 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 SUPERFAMILY SSF55874 388 571 1.44E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 SMART SM00073 6 103 1.4E-18 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 SUPERFAMILY SSF47384 327 386 4.71E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 Pfam PF01627 Hpt domain 8 99 3.2E-17 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 PANTHER PTHR22617:SF20 7 708 1.8E-167 T 23-04-2016 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 SUPERFAMILY SSF47226 6 128 9.55E-31 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 Gene3D G3DSA:1.10.287.560 326 386 8.8E-19 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 SMART SM00260 565 706 5.1E-33 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VV93_RS10935 e3084b6aa7c178682a7db911ddcf5f9c 715 SMART SM01231 325 385 2.2E-17 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VV93_RS05000 2d37c7bd034b4856f69973da1c5bd257 184 PANTHER PTHR37530 1 182 4.2E-49 T 23-04-2016 VV93_RS05000 2d37c7bd034b4856f69973da1c5bd257 184 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 6 154 6.4E-39 T 23-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VV93_RS05000 2d37c7bd034b4856f69973da1c5bd257 184 Pfam PF03843 Outer membrane lipoprotein Slp family 17 163 1.4E-47 T 23-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VV93_RS05000 2d37c7bd034b4856f69973da1c5bd257 184 PIRSF PIRSF004982 2 184 1.0E-60 T 23-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VV93_RS07745 3e9f02470a9bb928bbfc2fcfcf3c7ea2 472 Gene3D G3DSA:3.40.50.150 100 308 3.5E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS07745 3e9f02470a9bb928bbfc2fcfcf3c7ea2 472 PANTHER PTHR22807:SF38 1 367 1.3E-213 T 23-04-2016 VV93_RS07745 3e9f02470a9bb928bbfc2fcfcf3c7ea2 472 Pfam PF01189 16S rRNA methyltransferase RsmB/F 111 306 3.1E-48 T 23-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS07745 3e9f02470a9bb928bbfc2fcfcf3c7ea2 472 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 419 467 5.5E-11 T 23-04-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS07745 3e9f02470a9bb928bbfc2fcfcf3c7ea2 472 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 308 1.8E-99 T 23-04-2016 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS07745 3e9f02470a9bb928bbfc2fcfcf3c7ea2 472 PANTHER PTHR22807 1 367 1.3E-213 T 23-04-2016 VV93_RS07745 3e9f02470a9bb928bbfc2fcfcf3c7ea2 472 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 472 66.449 T 23-04-2016 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS07745 3e9f02470a9bb928bbfc2fcfcf3c7ea2 472 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 7.2E-29 T 23-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS07745 3e9f02470a9bb928bbfc2fcfcf3c7ea2 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 187 199 2.9E-27 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS07745 3e9f02470a9bb928bbfc2fcfcf3c7ea2 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 253 2.9E-27 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS07745 3e9f02470a9bb928bbfc2fcfcf3c7ea2 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 308 2.9E-27 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS07745 3e9f02470a9bb928bbfc2fcfcf3c7ea2 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 120 130 2.9E-27 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS07745 3e9f02470a9bb928bbfc2fcfcf3c7ea2 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 2.9E-27 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS07745 3e9f02470a9bb928bbfc2fcfcf3c7ea2 472 SUPERFAMILY SSF53335 6 308 3.28E-61 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS07745 3e9f02470a9bb928bbfc2fcfcf3c7ea2 472 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 186 197 - T 23-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS09980 804f59fee9c03764103b8a3d29ee2bd2 316 SUPERFAMILY SSF110849 42 89 3.66E-7 T 23-04-2016 IPR003115 ParB/Sulfiredoxin VV93_RS09980 804f59fee9c03764103b8a3d29ee2bd2 316 Gene3D G3DSA:3.90.1530.10 25 89 2.6E-6 T 23-04-2016 VV93_RS09980 804f59fee9c03764103b8a3d29ee2bd2 316 Pfam PF02195 ParB-like nuclease domain 36 88 1.7E-4 T 23-04-2016 IPR003115 ParB/Sulfiredoxin VV93_RS14080 02f9a34cd9a3b84dc761404d41bcbbbe 640 Pfam PF12848 ABC transporter 217 294 1.7E-27 T 23-04-2016 IPR032781 ABC-transporter extension domain VV93_RS14080 02f9a34cd9a3b84dc761404d41bcbbbe 640 PANTHER PTHR19211:SF49 1 557 0.0 T 23-04-2016 VV93_RS14080 02f9a34cd9a3b84dc761404d41bcbbbe 640 PANTHER PTHR19211 1 557 0.0 T 23-04-2016 VV93_RS14080 02f9a34cd9a3b84dc761404d41bcbbbe 640 Pfam PF00005 ABC transporter 328 459 4.5E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS14080 02f9a34cd9a3b84dc761404d41bcbbbe 640 Pfam PF00005 ABC transporter 17 178 2.2E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS14080 02f9a34cd9a3b84dc761404d41bcbbbe 640 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS14080 02f9a34cd9a3b84dc761404d41bcbbbe 640 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS14080 02f9a34cd9a3b84dc761404d41bcbbbe 640 SUPERFAMILY SSF52540 279 494 2.27E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14080 02f9a34cd9a3b84dc761404d41bcbbbe 640 SUPERFAMILY SSF52540 119 258 1.45E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14080 02f9a34cd9a3b84dc761404d41bcbbbe 640 SUPERFAMILY SSF52540 2 92 1.45E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14080 02f9a34cd9a3b84dc761404d41bcbbbe 640 SMART SM00382 337 503 5.0E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS14080 02f9a34cd9a3b84dc761404d41bcbbbe 640 SMART SM00382 26 223 7.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS14080 02f9a34cd9a3b84dc761404d41bcbbbe 640 Gene3D G3DSA:3.40.50.300 310 535 3.7E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14080 02f9a34cd9a3b84dc761404d41bcbbbe 640 Gene3D G3DSA:3.40.50.300 1 264 4.2E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07065 06ac64d65dd393c25370a73b36ef1a0a 473 Pfam PF08411 Exonuclease C-terminal 210 469 6.6E-104 T 23-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 VV93_RS07065 06ac64d65dd393c25370a73b36ef1a0a 473 PIRSF PIRSF000977 1 473 9.8E-198 T 23-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 VV93_RS07065 06ac64d65dd393c25370a73b36ef1a0a 473 PANTHER PTHR11046:SF2 1 472 6.4E-271 T 23-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 VV93_RS07065 06ac64d65dd393c25370a73b36ef1a0a 473 SUPERFAMILY SSF53098 7 471 7.59E-136 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS07065 06ac64d65dd393c25370a73b36ef1a0a 473 Pfam PF00929 Exonuclease 11 190 3.4E-23 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VV93_RS07065 06ac64d65dd393c25370a73b36ef1a0a 473 Gene3D G3DSA:3.30.420.10 2 197 4.0E-83 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS07065 06ac64d65dd393c25370a73b36ef1a0a 473 PANTHER PTHR11046 1 472 6.4E-271 T 23-04-2016 VV93_RS10670 35f607325505614645bcc82044d38bb1 544 PANTHER PTHR24423:SF564 255 533 4.1E-60 T 23-04-2016 VV93_RS10670 35f607325505614645bcc82044d38bb1 544 PANTHER PTHR24423:SF564 58 79 4.1E-60 T 23-04-2016 VV93_RS10670 35f607325505614645bcc82044d38bb1 544 SMART SM00387 426 536 1.9E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS10670 35f607325505614645bcc82044d38bb1 544 Gene3D G3DSA:3.30.565.10 396 538 4.1E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS10670 35f607325505614645bcc82044d38bb1 544 Pfam PF00512 His Kinase A (phospho-acceptor) domain 315 376 6.3E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS10670 35f607325505614645bcc82044d38bb1 544 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 475 1.8E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS10670 35f607325505614645bcc82044d38bb1 544 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 489 1.8E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS10670 35f607325505614645bcc82044d38bb1 544 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 514 1.8E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS10670 35f607325505614645bcc82044d38bb1 544 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 533 1.8E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS10670 35f607325505614645bcc82044d38bb1 544 Gene3D G3DSA:1.10.287.130 304 376 1.0E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS10670 35f607325505614645bcc82044d38bb1 544 SUPERFAMILY SSF55874 370 538 9.69E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS10670 35f607325505614645bcc82044d38bb1 544 SMART SM00304 261 313 1.3E-4 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS10670 35f607325505614645bcc82044d38bb1 544 PANTHER PTHR24423 255 533 4.1E-60 T 23-04-2016 VV93_RS10670 35f607325505614645bcc82044d38bb1 544 PANTHER PTHR24423 58 79 4.1E-60 T 23-04-2016 VV93_RS10670 35f607325505614645bcc82044d38bb1 544 SUPERFAMILY SSF47384 297 378 5.69E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS10670 35f607325505614645bcc82044d38bb1 544 SMART SM00388 314 380 8.4E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS10670 35f607325505614645bcc82044d38bb1 544 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 427 534 1.1E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS14320 009f2923e456dcd8974aa4be80d95534 510 SUPERFAMILY SSF53649 313 509 9.16E-76 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VV93_RS14320 009f2923e456dcd8974aa4be80d95534 510 SUPERFAMILY SSF53649 4 78 9.16E-76 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VV93_RS14320 009f2923e456dcd8974aa4be80d95534 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 509 9.4E-227 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VV93_RS14320 009f2923e456dcd8974aa4be80d95534 510 PIRSF PIRSF001492 1 510 3.3E-202 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VV93_RS14320 009f2923e456dcd8974aa4be80d95534 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 3.4E-78 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VV93_RS14320 009f2923e456dcd8974aa4be80d95534 510 Gene3D G3DSA:3.40.720.10 4 78 2.3E-86 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VV93_RS14320 009f2923e456dcd8974aa4be80d95534 510 Gene3D G3DSA:3.40.720.10 313 509 2.3E-86 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VV93_RS14320 009f2923e456dcd8974aa4be80d95534 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.145 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VV93_RS14320 009f2923e456dcd8974aa4be80d95534 510 PANTHER PTHR31637:SF0 4 510 2.4E-280 T 23-04-2016 VV93_RS14320 009f2923e456dcd8974aa4be80d95534 510 Gene3D G3DSA:3.40.1450.10 79 308 3.9E-93 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VV93_RS14320 009f2923e456dcd8974aa4be80d95534 510 PANTHER PTHR31637 4 510 2.4E-280 T 23-04-2016 VV93_RS14320 009f2923e456dcd8974aa4be80d95534 510 SUPERFAMILY SSF64158 78 308 9.02E-80 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VV93_RS14320 009f2923e456dcd8974aa4be80d95534 510 Pfam PF01676 Metalloenzyme superfamily 5 498 1.4E-80 T 23-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 PANTHER PTHR24423 13 28 2.3E-129 T 23-04-2016 VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 PANTHER PTHR24423 205 570 2.3E-129 T 23-04-2016 VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 SUPERFAMILY SSF52172 452 568 3.56E-33 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 272 3.8E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 SUPERFAMILY SSF55874 261 432 5.63E-46 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 Gene3D G3DSA:3.40.50.2300 452 568 1.1E-37 T 23-04-2016 VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 Gene3D G3DSA:3.30.565.10 274 432 1.0E-45 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 SMART SM00388 207 272 5.5E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 1.9E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 1.9E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 1.9E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 1.9E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 SMART SM00448 453 564 1.2E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 Pfam PF00072 Response regulator receiver domain 455 560 4.4E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 429 2.7E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 PANTHER PTHR24423:SF382 13 28 2.3E-129 T 23-04-2016 VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 PANTHER PTHR24423:SF382 205 570 2.3E-129 T 23-04-2016 VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 SMART SM00387 319 430 1.6E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 SUPERFAMILY SSF47384 195 272 1.41E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS09370 07e0bc91125e44926cb61f583e320662 571 Gene3D G3DSA:1.10.287.130 199 268 7.3E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS02070 3104fdf9413f854a3e56c01288b37089 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 388 4.9E-12 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VV93_RS02070 3104fdf9413f854a3e56c01288b37089 453 Gene3D G3DSA:3.40.50.720 1 90 8.1E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS02070 3104fdf9413f854a3e56c01288b37089 453 Gene3D G3DSA:3.40.1190.10 92 312 1.5E-86 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02070 3104fdf9413f854a3e56c01288b37089 453 Gene3D G3DSA:3.90.190.20 313 449 2.8E-35 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VV93_RS02070 3104fdf9413f854a3e56c01288b37089 453 SUPERFAMILY SSF53244 311 448 1.96E-36 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VV93_RS02070 3104fdf9413f854a3e56c01288b37089 453 SUPERFAMILY SSF53623 97 308 5.63E-53 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02070 3104fdf9413f854a3e56c01288b37089 453 SUPERFAMILY SSF51984 1 89 3.66E-23 T 23-04-2016 VV93_RS02070 3104fdf9413f854a3e56c01288b37089 453 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 58.868 T 23-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 VV93_RS02070 3104fdf9413f854a3e56c01288b37089 453 Pfam PF01225 Mur ligase family, catalytic domain 2 101 1.2E-19 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02070 3104fdf9413f854a3e56c01288b37089 453 PANTHER PTHR23135 1 439 6.5E-291 T 23-04-2016 VV93_RS02070 3104fdf9413f854a3e56c01288b37089 453 Pfam PF08245 Mur ligase middle domain 108 291 2.3E-21 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02070 3104fdf9413f854a3e56c01288b37089 453 PANTHER PTHR23135:SF17 1 439 6.5E-291 T 23-04-2016 VV93_RS02070 3104fdf9413f854a3e56c01288b37089 453 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 448 9.5E-260 T 23-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 VV93_RS12130 0e79d572abea75b8bb0e8233c9ac6b51 150 Pfam PF00583 Acetyltransferase (GNAT) family 48 121 1.0E-14 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS12130 0e79d572abea75b8bb0e8233c9ac6b51 150 PANTHER PTHR23091 1 143 9.9E-32 T 23-04-2016 VV93_RS12130 0e79d572abea75b8bb0e8233c9ac6b51 150 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 143 1.5E-37 T 23-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 VV93_RS12130 0e79d572abea75b8bb0e8233c9ac6b51 150 SUPERFAMILY SSF55729 1 145 3.38E-31 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS12130 0e79d572abea75b8bb0e8233c9ac6b51 150 PANTHER PTHR23091:SF247 1 143 9.9E-32 T 23-04-2016 VV93_RS12130 0e79d572abea75b8bb0e8233c9ac6b51 150 Gene3D G3DSA:3.40.630.30 2 144 3.7E-32 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS10600 f486adc96c993af94e55efcee382ac4b 183 PANTHER PTHR41394 7 179 3.8E-32 T 23-04-2016 VV93_RS10600 f486adc96c993af94e55efcee382ac4b 183 Pfam PF01769 Divalent cation transporter 50 171 3.1E-27 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VV93_RS10600 f486adc96c993af94e55efcee382ac4b 183 PANTHER PTHR41394:SF2 7 179 3.8E-32 T 23-04-2016 VV93_RS10600 f486adc96c993af94e55efcee382ac4b 183 SUPERFAMILY SSF161093 8 177 1.18E-48 T 23-04-2016 VV93_RS10600 f486adc96c993af94e55efcee382ac4b 183 Gene3D G3DSA:1.10.357.20 7 177 7.3E-54 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VV93_RS10130 da13b09da6b0f5f53f3e7b2ba6f13641 248 PANTHER PTHR38037 29 242 6.3E-55 T 23-04-2016 VV93_RS10130 da13b09da6b0f5f53f3e7b2ba6f13641 248 Gene3D G3DSA:2.40.70.10 106 236 1.2E-48 T 23-04-2016 IPR021109 Aspartic peptidase domain VV93_RS10130 da13b09da6b0f5f53f3e7b2ba6f13641 248 Pfam PF05618 Putative ATP-dependant zinc protease 108 243 2.1E-47 T 23-04-2016 VV93_RS10130 da13b09da6b0f5f53f3e7b2ba6f13641 248 SUPERFAMILY SSF50630 108 242 3.33E-42 T 23-04-2016 IPR021109 Aspartic peptidase domain VV93_RS02560 01e40373d1b9ecb6fafb5ef1d1af69c0 413 SUPERFAMILY SSF56349 105 386 5.0E-59 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS02560 01e40373d1b9ecb6fafb5ef1d1af69c0 413 PANTHER PTHR30629 2 402 1.2E-170 T 23-04-2016 VV93_RS02560 01e40373d1b9ecb6fafb5ef1d1af69c0 413 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 106 155 9.5E-12 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VV93_RS02560 01e40373d1b9ecb6fafb5ef1d1af69c0 413 PANTHER PTHR30629:SF2 2 402 1.2E-170 T 23-04-2016 VV93_RS02560 01e40373d1b9ecb6fafb5ef1d1af69c0 413 Gene3D G3DSA:1.10.443.10 215 384 4.7E-23 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS02560 01e40373d1b9ecb6fafb5ef1d1af69c0 413 Pfam PF13356 Domain of unknown function (DUF4102) 8 94 1.9E-18 T 23-04-2016 IPR025166 Domain of unknown function DUF4102 VV93_RS02560 01e40373d1b9ecb6fafb5ef1d1af69c0 413 Gene3D G3DSA:1.10.150.130 105 202 1.3E-21 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal VV93_RS02560 01e40373d1b9ecb6fafb5ef1d1af69c0 413 Pfam PF00589 Phage integrase family 214 376 3.1E-26 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS08325 e68e436b5d29c74957f8a1cc7e961f43 84 PANTHER PTHR33713:SF6 1 83 1.1E-22 T 23-04-2016 VV93_RS08325 e68e436b5d29c74957f8a1cc7e961f43 84 SUPERFAMILY SSF143120 1 81 4.32E-24 T 23-04-2016 VV93_RS08325 e68e436b5d29c74957f8a1cc7e961f43 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 74 8.2E-22 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VV93_RS08325 e68e436b5d29c74957f8a1cc7e961f43 84 Gene3D G3DSA:3.40.1620.10 1 50 8.5E-9 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VV93_RS08325 e68e436b5d29c74957f8a1cc7e961f43 84 PANTHER PTHR33713 1 83 1.1E-22 T 23-04-2016 VV93_RS08325 e68e436b5d29c74957f8a1cc7e961f43 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 55 8.4E-8 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VV93_RS07485 09e70b9d2d4175a3f590ad815a0992c7 342 Gene3D G3DSA:3.40.190.10 129 214 4.0E-14 T 23-04-2016 VV93_RS07485 09e70b9d2d4175a3f590ad815a0992c7 342 Gene3D G3DSA:3.40.190.10 227 257 7.3E-19 T 23-04-2016 VV93_RS07485 09e70b9d2d4175a3f590ad815a0992c7 342 Gene3D G3DSA:3.40.190.10 35 128 7.3E-19 T 23-04-2016 VV93_RS07485 09e70b9d2d4175a3f590ad815a0992c7 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 4.3E-31 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV93_RS07485 09e70b9d2d4175a3f590ad815a0992c7 342 PANTHER PTHR30085:SF5 8 311 7.6E-189 T 23-04-2016 VV93_RS07485 09e70b9d2d4175a3f590ad815a0992c7 342 PANTHER PTHR30085 8 311 7.6E-189 T 23-04-2016 VV93_RS07485 09e70b9d2d4175a3f590ad815a0992c7 342 SUPERFAMILY SSF53850 29 259 2.45E-50 T 23-04-2016 VV93_RS07485 09e70b9d2d4175a3f590ad815a0992c7 342 SMART SM00062 38 267 2.1E-56 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV93_RS10875 f5c95431b5309b3b120d69701a957a1a 184 SUPERFAMILY SSF52833 46 178 5.0E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS10875 f5c95431b5309b3b120d69701a957a1a 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 177 2.6E-72 T 23-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VV93_RS10875 f5c95431b5309b3b120d69701a957a1a 184 Pfam PF08534 Redoxin 41 164 1.1E-27 T 23-04-2016 IPR013740 Redoxin GO:0016491 VV93_RS10875 f5c95431b5309b3b120d69701a957a1a 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VV93_RS10875 f5c95431b5309b3b120d69701a957a1a 184 Gene3D G3DSA:3.40.30.10 10 177 8.5E-42 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS10875 f5c95431b5309b3b120d69701a957a1a 184 PANTHER PTHR10681 1 178 2.0E-74 T 23-04-2016 VV93_RS10875 f5c95431b5309b3b120d69701a957a1a 184 PANTHER PTHR10681:SF107 1 178 2.0E-74 T 23-04-2016 VV93_RS05405 99fa8f2c5a739cb9302d8ad9353e69bc 105 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 5.4E-35 T 23-04-2016 IPR023163 SMc04008-like domain VV93_RS05405 99fa8f2c5a739cb9302d8ad9353e69bc 105 Gene3D G3DSA:1.10.3340.10 6 92 1.9E-42 T 23-04-2016 IPR023163 SMc04008-like domain VV93_RS05405 99fa8f2c5a739cb9302d8ad9353e69bc 105 SUPERFAMILY SSF158757 8 84 1.27E-35 T 23-04-2016 IPR023163 SMc04008-like domain VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 5.4E-37 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 5.4E-37 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 5.4E-37 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 5.4E-37 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 5.4E-37 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 5.4E-37 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 SUPERFAMILY SSF53671 4 306 1.57E-101 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 2.5E-115 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 8.4E-43 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PANTHER PTHR11405 1 305 4.9E-143 T 23-04-2016 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PANTHER PTHR11405:SF16 1 305 4.9E-143 T 23-04-2016 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Gene3D G3DSA:3.40.50.1370 8 144 2.4E-50 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Gene3D G3DSA:3.40.50.1370 145 292 4.7E-56 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 2.6E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.6E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 2.6E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 2.6E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 1.5E-32 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VV93_RS13420 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.569 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VV93_RS09820 c99e87295e08cfbc324e60edf83d97d8 142 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 10 24 1.1E-4 T 23-04-2016 IPR011889 Bacterial surface protein 26-residue repeat VV93_RS09820 c99e87295e08cfbc324e60edf83d97d8 142 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 60 73 7.0E-7 T 23-04-2016 IPR011889 Bacterial surface protein 26-residue repeat VV93_RS09820 c99e87295e08cfbc324e60edf83d97d8 142 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 25 49 5.0E-6 T 23-04-2016 IPR011889 Bacterial surface protein 26-residue repeat VV93_RS09820 c99e87295e08cfbc324e60edf83d97d8 142 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 75 99 8.8E-6 T 23-04-2016 IPR011889 Bacterial surface protein 26-residue repeat VV93_RS09820 c99e87295e08cfbc324e60edf83d97d8 142 SUPERFAMILY SSF141571 8 116 7.46E-5 T 23-04-2016 VV93_RS09820 c99e87295e08cfbc324e60edf83d97d8 142 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 5 114 4.8E-41 T 23-04-2016 IPR005046 Protein of unknown function DUF285 VV93_RS02210 0f698efd378a474e12fb44e4470000d3 421 PANTHER PTHR21090 1 419 1.4E-210 T 23-04-2016 VV93_RS02210 0f698efd378a474e12fb44e4470000d3 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 2.0E-182 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS02210 0f698efd378a474e12fb44e4470000d3 421 SUPERFAMILY SSF55205 6 418 3.27E-142 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VV93_RS02210 0f698efd378a474e12fb44e4470000d3 421 Gene3D G3DSA:3.65.10.10 22 219 1.0E-69 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VV93_RS02210 0f698efd378a474e12fb44e4470000d3 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 45.808 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS02210 0f698efd378a474e12fb44e4470000d3 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 407 1.8E-122 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VV93_RS02210 0f698efd378a474e12fb44e4470000d3 421 Gene3D G3DSA:3.65.10.10 220 416 4.1E-59 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VV93_RS14190 0f5a51613d18c943f3951e0bf7f884ec 61 PANTHER PTHR38602:SF1 1 61 7.0E-21 T 23-04-2016 VV93_RS14190 0f5a51613d18c943f3951e0bf7f884ec 61 PANTHER PTHR38602 1 61 7.0E-21 T 23-04-2016 VV93_RS14190 0f5a51613d18c943f3951e0bf7f884ec 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 1.7E-24 T 23-04-2016 IPR019201 Protein of unknown function DUF2065 VV93_RS12475 6f177451ace214007bd6f68d7df5e5b9 453 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 208 269 1.2E-21 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain VV93_RS12475 6f177451ace214007bd6f68d7df5e5b9 453 Pfam PF12626 Polymerase A arginine-rich C-terminus 327 442 2.8E-37 T 23-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain VV93_RS12475 6f177451ace214007bd6f68d7df5e5b9 453 PANTHER PTHR13734 16 324 5.3E-128 T 23-04-2016 VV93_RS12475 6f177451ace214007bd6f68d7df5e5b9 453 SUPERFAMILY SSF81301 23 178 1.0E-41 T 23-04-2016 VV93_RS12475 6f177451ace214007bd6f68d7df5e5b9 453 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 12 453 37.547 T 23-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VV93_RS12475 6f177451ace214007bd6f68d7df5e5b9 453 Pfam PF01743 Poly A polymerase head domain 52 181 5.8E-39 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 VV93_RS12475 6f177451ace214007bd6f68d7df5e5b9 453 PANTHER PTHR13734:SF47 16 324 5.3E-128 T 23-04-2016 VV93_RS12475 6f177451ace214007bd6f68d7df5e5b9 453 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 21 448 4.9E-162 T 23-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VV93_RS12475 6f177451ace214007bd6f68d7df5e5b9 453 Gene3D G3DSA:1.10.3090.10 178 416 2.3E-48 T 23-04-2016 VV93_RS12475 6f177451ace214007bd6f68d7df5e5b9 453 SUPERFAMILY SSF81891 179 391 3.92E-49 T 23-04-2016 VV93_RS12475 6f177451ace214007bd6f68d7df5e5b9 453 Gene3D G3DSA:3.30.460.10 22 177 6.3E-50 T 23-04-2016 VV93_RS01960 8b3b65e9bb13c8bfeb6b4a009bdbeb00 187 Gene3D G3DSA:2.60.120.10 11 151 2.8E-27 T 23-04-2016 IPR014710 RmlC-like jelly roll fold VV93_RS01960 8b3b65e9bb13c8bfeb6b4a009bdbeb00 187 SUPERFAMILY SSF51206 17 137 1.7E-20 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like VV93_RS01960 8b3b65e9bb13c8bfeb6b4a009bdbeb00 187 PANTHER PTHR24567:SF33 13 184 3.2E-15 T 23-04-2016 VV93_RS01960 8b3b65e9bb13c8bfeb6b4a009bdbeb00 187 PANTHER PTHR24567 13 184 3.2E-15 T 23-04-2016 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 ProSitePatterns PS01312 SecA family signature. 501 516 - T 23-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 Gene3D G3DSA:3.40.50.300 418 619 3.6E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 SMART SM00958 228 359 3.1E-81 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 SUPERFAMILY SSF52540 418 610 2.01E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 PANTHER PTHR30612 551 907 0.0 T 23-04-2016 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 PANTHER PTHR30612 1 521 0.0 T 23-04-2016 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 SUPERFAMILY SSF81767 227 369 1.22E-42 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 PRINTS PR00906 SecA protein signature 63 87 1.2E-72 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 PRINTS PR00906 SecA protein signature 117 127 1.2E-72 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 PRINTS PR00906 SecA protein signature 101 115 1.2E-72 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 PRINTS PR00906 SecA protein signature 170 190 1.2E-72 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 PRINTS PR00906 SecA protein signature 377 394 1.2E-72 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 PRINTS PR00906 SecA protein signature 340 362 1.2E-72 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 PRINTS PR00906 SecA protein signature 414 427 1.2E-72 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 SUPERFAMILY SSF52540 369 416 1.31E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 SUPERFAMILY SSF52540 5 228 1.31E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 Gene3D G3DSA:3.90.1440.10 230 369 2.9E-46 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 Pfam PF01043 SecA preprotein cross-linking domain 232 359 3.3E-38 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 Pfam PF07517 SecA DEAD-like domain 7 403 2.8E-133 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 Gene3D G3DSA:3.40.50.300 370 417 1.2E-125 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 Gene3D G3DSA:3.40.50.300 2 228 1.2E-125 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.014 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 Gene3D G3DSA:1.10.3060.10 648 831 3.4E-58 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 SMART SM00957 6 403 0.0 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 Pfam PF07516 SecA Wing and Scaffold domain 617 829 2.3E-65 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 Pfam PF02810 SEC-C motif 887 905 1.7E-10 T 23-04-2016 IPR004027 SEC-C motif VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 SUPERFAMILY SSF81886 620 840 1.44E-82 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VV93_RS02860 8dad434667e99b63ead97866cedfa38b 907 SUPERFAMILY SSF81886 883 895 1.44E-82 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VV93_RS05060 f1b1df7298bec907dd4f1d05f58192a7 222 Gene3D G3DSA:1.10.10.10 126 221 3.1E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS05060 f1b1df7298bec907dd4f1d05f58192a7 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 2.9E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS05060 f1b1df7298bec907dd4f1d05f58192a7 222 SMART SM00862 146 220 3.6E-16 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS05060 f1b1df7298bec907dd4f1d05f58192a7 222 PANTHER PTHR26402 1 221 1.1E-75 T 23-04-2016 VV93_RS05060 f1b1df7298bec907dd4f1d05f58192a7 222 SUPERFAMILY SSF52172 1 166 1.11E-37 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS05060 f1b1df7298bec907dd4f1d05f58192a7 222 PANTHER PTHR26402:SF552 1 221 1.1E-75 T 23-04-2016 VV93_RS05060 f1b1df7298bec907dd4f1d05f58192a7 222 SMART SM00448 1 113 6.2E-42 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS05060 f1b1df7298bec907dd4f1d05f58192a7 222 Pfam PF00072 Response regulator receiver domain 3 112 2.9E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS05060 f1b1df7298bec907dd4f1d05f58192a7 222 Gene3D G3DSA:3.40.50.2300 1 120 3.7E-37 T 23-04-2016 VV93_RS00885 d1024fba42d825302df78b92e28ac8b8 275 SUPERFAMILY SSF109604 5 254 2.95E-56 T 23-04-2016 VV93_RS00885 d1024fba42d825302df78b92e28ac8b8 275 PANTHER PTHR33525 1 261 2.1E-49 T 23-04-2016 VV93_RS00885 d1024fba42d825302df78b92e28ac8b8 275 PANTHER PTHR33525:SF3 1 261 2.1E-49 T 23-04-2016 VV93_RS00885 d1024fba42d825302df78b92e28ac8b8 275 Pfam PF08668 HDOD domain 13 203 2.5E-52 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD VV93_RS00885 d1024fba42d825302df78b92e28ac8b8 275 Gene3D G3DSA:1.10.3150.10 4 255 9.0E-64 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD VV93_RS07395 40f053abc469416b40eb827e9a0bfa63 545 PANTHER PTHR32089:SF34 171 544 3.3E-123 T 23-04-2016 VV93_RS07395 40f053abc469416b40eb827e9a0bfa63 545 PANTHER PTHR32089 171 544 3.3E-123 T 23-04-2016 VV93_RS07395 40f053abc469416b40eb827e9a0bfa63 545 Gene3D G3DSA:1.10.287.950 298 512 4.1E-57 T 23-04-2016 VV93_RS07395 40f053abc469416b40eb827e9a0bfa63 545 SUPERFAMILY SSF58104 236 544 7.98E-79 T 23-04-2016 VV93_RS07395 40f053abc469416b40eb827e9a0bfa63 545 SMART SM00283 283 544 1.9E-76 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS07395 40f053abc469416b40eb827e9a0bfa63 545 SMART SM00304 214 268 1.0E-15 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS07395 40f053abc469416b40eb827e9a0bfa63 545 SMART SM00304 303 370 42.0 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS07395 40f053abc469416b40eb827e9a0bfa63 545 Pfam PF00672 HAMP domain 197 264 1.0E-16 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS07395 40f053abc469416b40eb827e9a0bfa63 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 349 543 6.2E-53 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS10645 4e636d6ea3da612a06842aa4afdf55dd 97 PANTHER PTHR33336:SF5 1 97 1.0E-21 T 23-04-2016 VV93_RS10645 4e636d6ea3da612a06842aa4afdf55dd 97 PANTHER PTHR33336 1 97 1.0E-21 T 23-04-2016 VV93_RS10645 4e636d6ea3da612a06842aa4afdf55dd 97 Gene3D G3DSA:3.30.70.900 1 92 9.8E-27 T 23-04-2016 VV93_RS10645 4e636d6ea3da612a06842aa4afdf55dd 97 SUPERFAMILY SSF54909 1 92 6.44E-27 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel VV93_RS10645 4e636d6ea3da612a06842aa4afdf55dd 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 4.5E-14 T 23-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain VV93_RS17925 733b988d5f9d0636436e7c41f076e858 280 SUPERFAMILY SSF52440 1 127 2.73E-51 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS17925 733b988d5f9d0636436e7c41f076e858 280 Gene3D G3DSA:3.30.470.20 200 278 2.2E-28 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VV93_RS17925 733b988d5f9d0636436e7c41f076e858 280 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV93_RS17925 733b988d5f9d0636436e7c41f076e858 280 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 279 1.0E-49 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV93_RS17925 733b988d5f9d0636436e7c41f076e858 280 PANTHER PTHR11405:SF5 1 280 1.7E-180 T 23-04-2016 VV93_RS17925 733b988d5f9d0636436e7c41f076e858 280 SUPERFAMILY SSF56059 128 280 7.42E-55 T 23-04-2016 VV93_RS17925 733b988d5f9d0636436e7c41f076e858 280 Gene3D G3DSA:3.40.50.20 3 108 1.5E-47 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS17925 733b988d5f9d0636436e7c41f076e858 280 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.2E-40 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS17925 733b988d5f9d0636436e7c41f076e858 280 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.2E-40 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS17925 733b988d5f9d0636436e7c41f076e858 280 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.2E-40 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS17925 733b988d5f9d0636436e7c41f076e858 280 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.2E-40 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS17925 733b988d5f9d0636436e7c41f076e858 280 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.2E-40 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS17925 733b988d5f9d0636436e7c41f076e858 280 Gene3D G3DSA:3.30.1490.20 141 199 3.5E-26 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VV93_RS17925 733b988d5f9d0636436e7c41f076e858 280 PANTHER PTHR11405 1 280 1.7E-180 T 23-04-2016 VV93_RS02830 956c8630bb4bd57ea9799ff695a17657 486 PANTHER PTHR23135:SF5 17 467 1.3E-226 T 23-04-2016 VV93_RS02830 956c8630bb4bd57ea9799ff695a17657 486 Gene3D G3DSA:3.40.50.720 23 110 1.2E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS02830 956c8630bb4bd57ea9799ff695a17657 486 Gene3D G3DSA:3.90.190.20 329 475 2.8E-58 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VV93_RS02830 956c8630bb4bd57ea9799ff695a17657 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 328 417 8.3E-23 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VV93_RS02830 956c8630bb4bd57ea9799ff695a17657 486 Pfam PF08245 Mur ligase middle domain 127 307 1.4E-29 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02830 956c8630bb4bd57ea9799ff695a17657 486 PANTHER PTHR23135 17 467 1.3E-226 T 23-04-2016 VV93_RS02830 956c8630bb4bd57ea9799ff695a17657 486 SUPERFAMILY SSF51984 23 109 6.28E-29 T 23-04-2016 VV93_RS02830 956c8630bb4bd57ea9799ff695a17657 486 Pfam PF01225 Mur ligase family, catalytic domain 25 121 3.9E-29 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02830 956c8630bb4bd57ea9799ff695a17657 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.158 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS02830 956c8630bb4bd57ea9799ff695a17657 486 SUPERFAMILY SSF53623 108 321 5.23E-72 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02830 956c8630bb4bd57ea9799ff695a17657 486 SUPERFAMILY SSF53244 326 474 5.68E-49 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VV93_RS02830 956c8630bb4bd57ea9799ff695a17657 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 4.1E-187 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS02830 956c8630bb4bd57ea9799ff695a17657 486 Gene3D G3DSA:3.40.1190.10 111 328 6.2E-82 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS14620 9673fe3c17746755f97c9f6a5cbd6ab0 197 PANTHER PTHR42160 1 193 7.1E-92 T 23-04-2016 VV93_RS14620 9673fe3c17746755f97c9f6a5cbd6ab0 197 SUPERFAMILY SSF52141 3 190 1.21E-55 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like VV93_RS14620 9673fe3c17746755f97c9f6a5cbd6ab0 197 Pfam PF03167 Uracil DNA glycosylase superfamily 31 179 1.2E-24 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like VV93_RS14620 9673fe3c17746755f97c9f6a5cbd6ab0 197 Gene3D G3DSA:3.40.470.10 3 191 2.2E-43 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like VV93_RS14620 9673fe3c17746755f97c9f6a5cbd6ab0 197 PANTHER PTHR42160:SF1 1 193 7.1E-92 T 23-04-2016 VV93_RS14620 9673fe3c17746755f97c9f6a5cbd6ab0 197 SMART SM00987 27 183 1.5E-31 T 23-04-2016 VV93_RS14620 9673fe3c17746755f97c9f6a5cbd6ab0 197 SMART SM00986 27 183 1.5E-31 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like VV93_RS07775 13112f9ab7e94fcfa4fde8d745c9a22c 666 Gene3D G3DSA:3.90.226.10 641 663 8.6E-65 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS07775 13112f9ab7e94fcfa4fde8d745c9a22c 666 Gene3D G3DSA:3.90.226.10 336 529 8.6E-65 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS07775 13112f9ab7e94fcfa4fde8d745c9a22c 666 SUPERFAMILY SSF50156 217 337 2.23E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS07775 13112f9ab7e94fcfa4fde8d745c9a22c 666 PANTHER PTHR32060:SF11 7 600 5.9E-295 T 23-04-2016 VV93_RS07775 13112f9ab7e94fcfa4fde8d745c9a22c 666 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 197 547 2.2E-112 T 23-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 VV93_RS07775 13112f9ab7e94fcfa4fde8d745c9a22c 666 Pfam PF03572 Peptidase family S41 356 525 1.4E-50 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 VV93_RS07775 13112f9ab7e94fcfa4fde8d745c9a22c 666 Pfam PF08180 B melanoma antigen family 9 36 7.0E-13 T 23-04-2016 IPR012530 B melanoma antigen VV93_RS07775 13112f9ab7e94fcfa4fde8d745c9a22c 666 Gene3D G3DSA:2.30.42.10 252 335 8.5E-20 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS07775 13112f9ab7e94fcfa4fde8d745c9a22c 666 SMART SM00228 246 323 3.4E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS07775 13112f9ab7e94fcfa4fde8d745c9a22c 666 SUPERFAMILY SSF52096 350 532 2.98E-72 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS07775 13112f9ab7e94fcfa4fde8d745c9a22c 666 SUPERFAMILY SSF52096 165 264 2.98E-72 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS07775 13112f9ab7e94fcfa4fde8d745c9a22c 666 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 530 662 6.8E-39 T 23-04-2016 IPR020992 Tail specific protease, C-terminal VV93_RS07775 13112f9ab7e94fcfa4fde8d745c9a22c 666 Gene3D G3DSA:3.30.750.44 162 251 2.1E-5 T 23-04-2016 VV93_RS07775 13112f9ab7e94fcfa4fde8d745c9a22c 666 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 320 1.6E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS07775 13112f9ab7e94fcfa4fde8d745c9a22c 666 PANTHER PTHR32060 7 600 5.9E-295 T 23-04-2016 VV93_RS07775 13112f9ab7e94fcfa4fde8d745c9a22c 666 SMART SM00245 326 527 8.5E-67 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 PIRSF PIRSF001336 1 636 6.3E-257 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 PANTHER PTHR11482 442 600 4.4E-256 T 23-04-2016 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 PANTHER PTHR11482 2 369 4.4E-256 T 23-04-2016 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 SUPERFAMILY SSF51419 66 348 1.52E-64 T 23-04-2016 IPR029066 PLP-binding barrel VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 545 558 9.9E-13 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 242 255 9.9E-13 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 98 116 9.9E-13 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 336 355 9.9E-13 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 3 635 43.419 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 351 565 7.7E-23 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 Gene3D G3DSA:3.20.20.10 69 333 1.1E-59 T 23-04-2016 IPR029066 PLP-binding barrel VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 TIGRFAM TIGR01273 speA: arginine decarboxylase 7 634 1.3E-270 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 PRINTS PR01180 Arginine decarboxylase signature 175 196 2.2E-63 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 PRINTS PR01180 Arginine decarboxylase signature 492 517 2.2E-63 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 PRINTS PR01180 Arginine decarboxylase signature 326 343 2.2E-63 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 PRINTS PR01180 Arginine decarboxylase signature 467 488 2.2E-63 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 PRINTS PR01180 Arginine decarboxylase signature 545 566 2.2E-63 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 PRINTS PR01180 Arginine decarboxylase signature 90 104 2.2E-63 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 PRINTS PR01180 Arginine decarboxylase signature 199 221 2.2E-63 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 PRINTS PR01180 Arginine decarboxylase signature 66 81 2.2E-63 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 PRINTS PR01180 Arginine decarboxylase signature 149 164 2.2E-63 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 PANTHER PTHR11482:SF36 442 600 4.4E-256 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 PANTHER PTHR11482:SF36 2 369 4.4E-256 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 86 347 1.3E-53 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 Gene3D G3DSA:2.40.37.10 458 591 1.9E-12 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VV93_RS08890 b08a43a23a3fffef50d5c45bac579829 636 Gene3D G3DSA:2.40.37.10 334 359 1.9E-12 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VV93_RS06770 44893c6e66a322643b44d9cbd76497a9 216 SMART SM00382 28 212 2.9E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS06770 44893c6e66a322643b44d9cbd76497a9 216 SUPERFAMILY SSF52540 10 199 2.59E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06770 44893c6e66a322643b44d9cbd76497a9 216 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS06770 44893c6e66a322643b44d9cbd76497a9 216 Gene3D G3DSA:3.40.50.300 6 199 1.2E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06770 44893c6e66a322643b44d9cbd76497a9 216 PANTHER PTHR24220 4 206 8.7E-100 T 23-04-2016 VV93_RS06770 44893c6e66a322643b44d9cbd76497a9 216 PANTHER PTHR24220:SF485 4 206 8.7E-100 T 23-04-2016 VV93_RS06770 44893c6e66a322643b44d9cbd76497a9 216 Pfam PF00005 ABC transporter 20 163 1.2E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS12780 5ad1544f883d556d5cf56e694fd0522c 93 PANTHER PTHR37485:SF1 2 93 5.9E-45 T 23-04-2016 VV93_RS12780 5ad1544f883d556d5cf56e694fd0522c 93 PANTHER PTHR37485 2 93 5.9E-45 T 23-04-2016 VV93_RS12780 5ad1544f883d556d5cf56e694fd0522c 93 Pfam PF04977 Septum formation initiator 11 89 4.3E-28 T 23-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 VV93_RS12780 5ad1544f883d556d5cf56e694fd0522c 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 37.024 T 23-04-2016 IPR023081 Cell division protein FtsB VV93_RS15165 a22768ec3f4a58b3782bf29533130120 306 Gene3D G3DSA:3.40.190.10 172 255 2.3E-7 T 23-04-2016 VV93_RS15165 a22768ec3f4a58b3782bf29533130120 306 Pfam PF03466 LysR substrate binding domain 88 289 3.0E-23 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS15165 a22768ec3f4a58b3782bf29533130120 306 Gene3D G3DSA:3.40.190.10 89 171 1.7E-8 T 23-04-2016 VV93_RS15165 a22768ec3f4a58b3782bf29533130120 306 PANTHER PTHR30126:SF18 2 305 4.6E-157 T 23-04-2016 VV93_RS15165 a22768ec3f4a58b3782bf29533130120 306 Gene3D G3DSA:1.10.10.10 6 87 3.5E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS15165 a22768ec3f4a58b3782bf29533130120 306 PANTHER PTHR30126 2 305 4.6E-157 T 23-04-2016 VV93_RS15165 a22768ec3f4a58b3782bf29533130120 306 SUPERFAMILY SSF53850 89 290 5.25E-26 T 23-04-2016 VV93_RS15165 a22768ec3f4a58b3782bf29533130120 306 SUPERFAMILY SSF46785 6 87 1.2E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS15165 a22768ec3f4a58b3782bf29533130120 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.6E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS09625 a0e8637c77cd5188242631059fa62da6 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 23-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VV93_RS09625 a0e8637c77cd5188242631059fa62da6 398 Pfam PF00871 Acetokinase family 5 390 4.4E-169 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VV93_RS09625 a0e8637c77cd5188242631059fa62da6 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 2.6E-174 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VV93_RS09625 a0e8637c77cd5188242631059fa62da6 398 PANTHER PTHR21060:SF15 1 395 4.9E-271 T 23-04-2016 VV93_RS09625 a0e8637c77cd5188242631059fa62da6 398 SUPERFAMILY SSF53067 155 395 4.58E-86 T 23-04-2016 VV93_RS09625 a0e8637c77cd5188242631059fa62da6 398 SUPERFAMILY SSF53067 3 195 2.78E-66 T 23-04-2016 VV93_RS09625 a0e8637c77cd5188242631059fa62da6 398 Gene3D G3DSA:3.30.420.40 82 203 8.9E-10 T 23-04-2016 VV93_RS09625 a0e8637c77cd5188242631059fa62da6 398 PANTHER PTHR21060 1 395 4.9E-271 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VV93_RS09625 a0e8637c77cd5188242631059fa62da6 398 PRINTS PR00471 Acetate kinase family signature 321 337 2.5E-45 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VV93_RS09625 a0e8637c77cd5188242631059fa62da6 398 PRINTS PR00471 Acetate kinase family signature 377 389 2.5E-45 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VV93_RS09625 a0e8637c77cd5188242631059fa62da6 398 PRINTS PR00471 Acetate kinase family signature 202 223 2.5E-45 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VV93_RS09625 a0e8637c77cd5188242631059fa62da6 398 PRINTS PR00471 Acetate kinase family signature 172 185 2.5E-45 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VV93_RS09625 a0e8637c77cd5188242631059fa62da6 398 PRINTS PR00471 Acetate kinase family signature 5 16 2.5E-45 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VV93_RS09625 a0e8637c77cd5188242631059fa62da6 398 PRINTS PR00471 Acetate kinase family signature 298 311 2.5E-45 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VV93_RS09625 a0e8637c77cd5188242631059fa62da6 398 Gene3D G3DSA:3.30.420.40 204 395 1.0E-76 T 23-04-2016 VV93_RS09625 a0e8637c77cd5188242631059fa62da6 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 191.208 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VV93_RS09625 a0e8637c77cd5188242631059fa62da6 398 PIRSF PIRSF000722 1 397 3.3E-149 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VV93_RS09625 a0e8637c77cd5188242631059fa62da6 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 23-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VV93_RS07185 b448bb5817dfb1b68fa89b781c2c6419 378 Gene3D G3DSA:2.60.120.10 72 165 9.6E-21 T 23-04-2016 IPR014710 RmlC-like jelly roll fold VV93_RS07185 b448bb5817dfb1b68fa89b781c2c6419 378 Gene3D G3DSA:2.60.120.10 217 352 2.8E-28 T 23-04-2016 IPR014710 RmlC-like jelly roll fold VV93_RS07185 b448bb5817dfb1b68fa89b781c2c6419 378 SUPERFAMILY SSF51182 57 375 9.71E-89 T 23-04-2016 IPR011051 RmlC-like cupin domain VV93_RS07185 b448bb5817dfb1b68fa89b781c2c6419 378 Pfam PF04209 homogentisate 1,2-dioxygenase 88 375 1.0E-20 T 23-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 VV93_RS07185 b448bb5817dfb1b68fa89b781c2c6419 378 PANTHER PTHR11056 85 373 2.1E-68 T 23-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 VV93_RS09585 7f1d7469f298b0f4c0d12526dc645d19 202 Pfam PF02810 SEC-C motif 184 202 2.0E-10 T 23-04-2016 IPR004027 SEC-C motif VV93_RS09585 7f1d7469f298b0f4c0d12526dc645d19 202 Pfam PF03695 Uncharacterised protein family (UPF0149) 14 135 1.5E-5 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 VV93_RS09585 7f1d7469f298b0f4c0d12526dc645d19 202 PANTHER PTHR33747:SF1 86 202 1.3E-15 T 23-04-2016 VV93_RS09585 7f1d7469f298b0f4c0d12526dc645d19 202 SUPERFAMILY SSF103642 182 201 2.62E-7 T 23-04-2016 VV93_RS09585 7f1d7469f298b0f4c0d12526dc645d19 202 Gene3D G3DSA:3.10.450.50 169 202 6.6E-11 T 23-04-2016 IPR032710 NTF2-like domain VV93_RS09585 7f1d7469f298b0f4c0d12526dc645d19 202 PANTHER PTHR33747 86 202 1.3E-15 T 23-04-2016 VV93_RS03815 469e675c3069e26d3980930cbe0fcbf5 157 PANTHER PTHR30471:SF5 11 157 3.4E-72 T 23-04-2016 VV93_RS03815 469e675c3069e26d3980930cbe0fcbf5 157 Gene3D G3DSA:3.40.140.10 35 157 3.7E-47 T 23-04-2016 VV93_RS03815 469e675c3069e26d3980930cbe0fcbf5 157 PANTHER PTHR30471 11 157 3.4E-72 T 23-04-2016 VV93_RS03815 469e675c3069e26d3980930cbe0fcbf5 157 SUPERFAMILY SSF102712 52 126 3.4E-6 T 23-04-2016 VV93_RS03815 469e675c3069e26d3980930cbe0fcbf5 157 Pfam PF04002 RadC-like JAB domain 38 155 2.2E-42 T 23-04-2016 IPR025657 RadC-like JAB domain VV93_RS03815 469e675c3069e26d3980930cbe0fcbf5 157 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 23-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site VV93_RS03815 469e675c3069e26d3980930cbe0fcbf5 157 TIGRFAM TIGR00608 radc: DNA repair protein RadC 23 157 2.8E-42 T 23-04-2016 IPR001405 RadC protein VV93_RS06265 38d4d23c66e38e274972d4bf75633a8f 389 SMART SM00028 180 213 0.019 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS06265 38d4d23c66e38e274972d4bf75633a8f 389 SMART SM00028 35 68 400.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS06265 38d4d23c66e38e274972d4bf75633a8f 389 SMART SM00028 214 247 0.014 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS06265 38d4d23c66e38e274972d4bf75633a8f 389 SMART SM00028 69 102 81.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS06265 38d4d23c66e38e274972d4bf75633a8f 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.814 T 23-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 VV93_RS06265 38d4d23c66e38e274972d4bf75633a8f 389 PANTHER PTHR23083 8 348 1.9E-38 T 23-04-2016 VV93_RS06265 38d4d23c66e38e274972d4bf75633a8f 389 SUPERFAMILY SSF48452 31 96 2.77E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS06265 38d4d23c66e38e274972d4bf75633a8f 389 SUPERFAMILY SSF48452 109 279 1.18E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS06265 38d4d23c66e38e274972d4bf75633a8f 389 Gene3D G3DSA:1.25.40.10 30 281 2.3E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS06265 38d4d23c66e38e274972d4bf75633a8f 389 Pfam PF13176 Tetratricopeptide repeat 71 94 0.03 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS06265 38d4d23c66e38e274972d4bf75633a8f 389 Pfam PF13181 Tetratricopeptide repeat 180 213 0.012 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS06265 38d4d23c66e38e274972d4bf75633a8f 389 Pfam PF13181 Tetratricopeptide repeat 216 246 0.035 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS12770 5750b4747a89c077868aeff0739745d3 158 Pfam PF02542 YgbB family 2 155 9.1E-66 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS12770 5750b4747a89c077868aeff0739745d3 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 36.273 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS12770 5750b4747a89c077868aeff0739745d3 158 Gene3D G3DSA:3.30.1330.50 1 157 5.9E-72 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS12770 5750b4747a89c077868aeff0739745d3 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 1.1E-69 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS12770 5750b4747a89c077868aeff0739745d3 158 SUPERFAMILY SSF69765 1 157 2.49E-65 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS12770 5750b4747a89c077868aeff0739745d3 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 23-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS12770 5750b4747a89c077868aeff0739745d3 158 PANTHER PTHR32125 1 157 5.2E-57 T 23-04-2016 VV93_RS02740 93f2fb93055df6939c8df7e296ca288a 421 PANTHER PTHR19271 247 418 2.8E-265 T 23-04-2016 VV93_RS02740 93f2fb93055df6939c8df7e296ca288a 421 PANTHER PTHR19271 1 221 2.8E-265 T 23-04-2016 VV93_RS02740 93f2fb93055df6939c8df7e296ca288a 421 Gene3D G3DSA:1.20.810.10 6 416 1.4E-156 T 23-04-2016 IPR027387 Cytochrome b/b6-like domain VV93_RS02740 93f2fb93055df6939c8df7e296ca288a 421 PIRSF PIRSF038885 1 421 1.2E-151 T 23-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 VV93_RS02740 93f2fb93055df6939c8df7e296ca288a 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 4.6E-40 T 23-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 VV93_RS02740 93f2fb93055df6939c8df7e296ca288a 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 6.4E-66 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VV93_RS02740 93f2fb93055df6939c8df7e296ca288a 421 SUPERFAMILY SSF81648 297 411 2.62E-33 T 23-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 VV93_RS02740 93f2fb93055df6939c8df7e296ca288a 421 SUPERFAMILY SSF81342 248 296 5.97E-92 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VV93_RS02740 93f2fb93055df6939c8df7e296ca288a 421 SUPERFAMILY SSF81342 6 221 5.97E-92 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VV93_RS02740 93f2fb93055df6939c8df7e296ca288a 421 PANTHER PTHR19271:SF9 247 418 2.8E-265 T 23-04-2016 VV93_RS02740 93f2fb93055df6939c8df7e296ca288a 421 PANTHER PTHR19271:SF9 1 221 2.8E-265 T 23-04-2016 VV93_RS14900 926297af60281f78317f03ca5ecc1b39 313 Gene3D G3DSA:3.40.190.10 184 280 3.9E-32 T 23-04-2016 VV93_RS14900 926297af60281f78317f03ca5ecc1b39 313 PANTHER PTHR30118:SF9 1 307 6.1E-179 T 23-04-2016 VV93_RS14900 926297af60281f78317f03ca5ecc1b39 313 SUPERFAMILY SSF53850 92 307 4.65E-50 T 23-04-2016 VV93_RS14900 926297af60281f78317f03ca5ecc1b39 313 SUPERFAMILY SSF46785 7 86 1.69E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS14900 926297af60281f78317f03ca5ecc1b39 313 Gene3D G3DSA:3.40.190.10 284 307 1.8E-21 T 23-04-2016 VV93_RS14900 926297af60281f78317f03ca5ecc1b39 313 Gene3D G3DSA:3.40.190.10 92 183 1.8E-21 T 23-04-2016 VV93_RS14900 926297af60281f78317f03ca5ecc1b39 313 Gene3D G3DSA:1.10.10.10 2 87 5.3E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS14900 926297af60281f78317f03ca5ecc1b39 313 Pfam PF03466 LysR substrate binding domain 97 307 5.9E-32 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS14900 926297af60281f78317f03ca5ecc1b39 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.2E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS14900 926297af60281f78317f03ca5ecc1b39 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.2E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS14900 926297af60281f78317f03ca5ecc1b39 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.2E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS14900 926297af60281f78317f03ca5ecc1b39 313 PANTHER PTHR30118 1 307 6.1E-179 T 23-04-2016 VV93_RS14900 926297af60281f78317f03ca5ecc1b39 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 5.1E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS05190 eb83f779ca2be853f14391d038bf3765 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 8.9E-15 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS05190 eb83f779ca2be853f14391d038bf3765 242 Gene3D G3DSA:3.40.50.2300 5 132 6.0E-40 T 23-04-2016 VV93_RS05190 eb83f779ca2be853f14391d038bf3765 242 PANTHER PTHR26402 5 238 7.8E-99 T 23-04-2016 VV93_RS05190 eb83f779ca2be853f14391d038bf3765 242 Gene3D G3DSA:1.10.10.10 136 237 7.4E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS05190 eb83f779ca2be853f14391d038bf3765 242 SUPERFAMILY SSF52172 5 129 4.13E-40 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS05190 eb83f779ca2be853f14391d038bf3765 242 SMART SM00448 5 116 1.4E-41 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS05190 eb83f779ca2be853f14391d038bf3765 242 PANTHER PTHR26402:SF528 5 238 7.8E-99 T 23-04-2016 VV93_RS05190 eb83f779ca2be853f14391d038bf3765 242 SMART SM00862 158 234 1.6E-12 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS05190 eb83f779ca2be853f14391d038bf3765 242 SUPERFAMILY SSF46894 135 235 8.79E-21 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV93_RS05190 eb83f779ca2be853f14391d038bf3765 242 Pfam PF00072 Response regulator receiver domain 7 117 4.4E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS02725 d5e2ae1ce539f711d682c6bdf8534ef8 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.345 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VV93_RS02725 d5e2ae1ce539f711d682c6bdf8534ef8 142 PANTHER PTHR11545 1 142 8.3E-78 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VV93_RS02725 d5e2ae1ce539f711d682c6bdf8534ef8 142 SUPERFAMILY SSF52161 1 140 9.42E-60 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 VV93_RS02725 d5e2ae1ce539f711d682c6bdf8534ef8 142 PIRSF PIRSF002181 1 142 1.1E-51 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VV93_RS02725 d5e2ae1ce539f711d682c6bdf8534ef8 142 Pfam PF00572 Ribosomal protein L13 15 138 5.0E-56 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VV93_RS02725 d5e2ae1ce539f711d682c6bdf8534ef8 142 Gene3D G3DSA:3.90.1180.10 3 141 1.9E-64 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 VV93_RS02725 d5e2ae1ce539f711d682c6bdf8534ef8 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 1.2E-64 T 23-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 VV93_RS02725 d5e2ae1ce539f711d682c6bdf8534ef8 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 23-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 VV93_RS08895 d2c4bc7e67951ebf552124aa9dcfa4f0 311 PIRSF PIRSF036979 12 305 2.8E-95 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VV93_RS08895 d2c4bc7e67951ebf552124aa9dcfa4f0 311 Pfam PF00491 Arginase family 33 298 1.5E-88 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VV93_RS08895 d2c4bc7e67951ebf552124aa9dcfa4f0 311 Gene3D G3DSA:3.40.800.10 11 305 2.3E-100 T 23-04-2016 IPR023696 Ureohydrolase domain VV93_RS08895 d2c4bc7e67951ebf552124aa9dcfa4f0 311 SUPERFAMILY SSF52768 12 303 1.4E-93 T 23-04-2016 VV93_RS08895 d2c4bc7e67951ebf552124aa9dcfa4f0 311 TIGRFAM TIGR01230 agmatinase: agmatinase 26 299 1.3E-92 T 23-04-2016 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 VV93_RS08895 d2c4bc7e67951ebf552124aa9dcfa4f0 311 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 23-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 VV93_RS08895 d2c4bc7e67951ebf552124aa9dcfa4f0 311 PANTHER PTHR11358 31 310 3.5E-101 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VV93_RS08895 d2c4bc7e67951ebf552124aa9dcfa4f0 311 PANTHER PTHR11358:SF26 31 310 3.5E-101 T 23-04-2016 VV93_RS10435 24f04ee353355fba52e1060a91652372 251 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 1.3E-115 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VV93_RS10435 24f04ee353355fba52e1060a91652372 251 Gene3D G3DSA:3.90.550.10 1 248 2.7E-84 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS10435 24f04ee353355fba52e1060a91652372 251 PANTHER PTHR21485 1 251 4.8E-124 T 23-04-2016 VV93_RS10435 24f04ee353355fba52e1060a91652372 251 Pfam PF02348 Cytidylyltransferase 5 221 4.1E-68 T 23-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VV93_RS10435 24f04ee353355fba52e1060a91652372 251 SUPERFAMILY SSF53448 3 246 1.74E-64 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS10435 24f04ee353355fba52e1060a91652372 251 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 47.601 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VV93_RS10435 24f04ee353355fba52e1060a91652372 251 PANTHER PTHR21485:SF4 1 251 4.8E-124 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VV93_RS10005 babc153adfcca982b89bcc0ade3ebc03 189 Pfam PF03695 Uncharacterised protein family (UPF0149) 3 178 2.4E-31 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 VV93_RS10005 babc153adfcca982b89bcc0ade3ebc03 189 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 3 174 1.2E-42 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 VV93_RS10005 babc153adfcca982b89bcc0ade3ebc03 189 SUPERFAMILY SSF101327 3 175 7.19E-31 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 VV93_RS07890 773eb2814f0ba8bcf9654f57c72b3f40 110 Pfam PF01381 Helix-turn-helix 6 60 1.6E-15 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV93_RS07890 773eb2814f0ba8bcf9654f57c72b3f40 110 Gene3D G3DSA:1.10.260.40 1 95 7.2E-21 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS07890 773eb2814f0ba8bcf9654f57c72b3f40 110 SUPERFAMILY SSF47413 2 67 5.63E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS07890 773eb2814f0ba8bcf9654f57c72b3f40 110 PANTHER PTHR10245 1 104 2.5E-12 T 23-04-2016 VV93_RS07890 773eb2814f0ba8bcf9654f57c72b3f40 110 SMART SM00530 5 60 1.5E-15 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV93_RS06155 cac1913ed3ae495a3aa30005bab107d9 267 SUPERFAMILY SSF56752 1 259 2.35E-67 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VV93_RS06155 cac1913ed3ae495a3aa30005bab107d9 267 Pfam PF01063 Amino-transferase class IV 24 247 1.3E-40 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VV93_RS06155 cac1913ed3ae495a3aa30005bab107d9 267 Gene3D G3DSA:3.20.10.10 123 262 1.3E-36 T 23-04-2016 VV93_RS06155 cac1913ed3ae495a3aa30005bab107d9 267 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 23-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 VV93_RS06155 cac1913ed3ae495a3aa30005bab107d9 267 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 1.2E-106 T 23-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 VV93_RS06155 cac1913ed3ae495a3aa30005bab107d9 267 Gene3D G3DSA:3.30.470.10 1 106 1.0E-32 T 23-04-2016 VV93_RS20710 97aa12a897cb0612688d317b928bfa53 313 Gene3D G3DSA:3.90.1150.10 285 310 3.0E-6 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS20710 97aa12a897cb0612688d317b928bfa53 313 PANTHER PTHR11999 6 313 1.7E-144 T 23-04-2016 VV93_RS20710 97aa12a897cb0612688d317b928bfa53 313 Gene3D G3DSA:3.40.640.10 21 284 7.3E-89 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS20710 97aa12a897cb0612688d317b928bfa53 313 PANTHER PTHR11999:SF106 6 313 1.7E-144 T 23-04-2016 VV93_RS20710 97aa12a897cb0612688d317b928bfa53 313 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 6 304 2.1E-56 T 23-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VV93_RS20710 97aa12a897cb0612688d317b928bfa53 313 SUPERFAMILY SSF53383 2 307 1.42E-92 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS11665 4357c09a1c831a8fa9117ca7fe723201 181 SUPERFAMILY SSF50891 19 180 5.26E-55 T 23-04-2016 IPR029000 Cyclophilin-like domain VV93_RS11665 4357c09a1c831a8fa9117ca7fe723201 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 6.2E-11 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VV93_RS11665 4357c09a1c831a8fa9117ca7fe723201 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 6.2E-11 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VV93_RS11665 4357c09a1c831a8fa9117ca7fe723201 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 6.2E-11 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VV93_RS11665 4357c09a1c831a8fa9117ca7fe723201 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 23-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VV93_RS11665 4357c09a1c831a8fa9117ca7fe723201 181 PANTHER PTHR11071 23 180 1.9E-58 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VV93_RS11665 4357c09a1c831a8fa9117ca7fe723201 181 PIRSF PIRSF001467 5 179 1.6E-24 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VV93_RS11665 4357c09a1c831a8fa9117ca7fe723201 181 PANTHER PTHR11071:SF265 23 180 1.9E-58 T 23-04-2016 VV93_RS11665 4357c09a1c831a8fa9117ca7fe723201 181 Gene3D G3DSA:2.40.100.10 20 180 6.7E-51 T 23-04-2016 IPR029000 Cyclophilin-like domain VV93_RS11665 4357c09a1c831a8fa9117ca7fe723201 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 178 3.4E-45 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VV93_RS13060 10f401e1337f1fcbaf6cc986feb0a540 185 PANTHER PTHR33219 1 185 1.0E-87 T 23-04-2016 VV93_RS13060 10f401e1337f1fcbaf6cc986feb0a540 185 Pfam PF02325 YGGT family 109 173 1.8E-19 T 23-04-2016 IPR003425 CCB3/YggT GO:0016020 VV93_RS13060 10f401e1337f1fcbaf6cc986feb0a540 185 Pfam PF02325 YGGT family 10 77 2.8E-19 T 23-04-2016 IPR003425 CCB3/YggT GO:0016020 VV93_RS13060 10f401e1337f1fcbaf6cc986feb0a540 185 PANTHER PTHR33219:SF5 1 185 1.0E-87 T 23-04-2016 VV93_RS08180 4875decca2110aec5729b4d4648b8174 232 Gene3D G3DSA:1.10.3720.10 10 227 3.0E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS08180 4875decca2110aec5729b4d4648b8174 232 SUPERFAMILY SSF161098 6 222 2.88E-30 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS08180 4875decca2110aec5729b4d4648b8174 232 PANTHER PTHR30183 1 232 5.0E-109 T 23-04-2016 VV93_RS08180 4875decca2110aec5729b4d4648b8174 232 PANTHER PTHR30183:SF4 1 232 5.0E-109 T 23-04-2016 VV93_RS08180 4875decca2110aec5729b4d4648b8174 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 220 2.4E-11 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS13820 f0095ac62320b40e7416ecfd9878de1c 196 Pfam PF04350 Pilus assembly protein, PilO 47 189 8.4E-46 T 23-04-2016 IPR007445 Pilus assembly protein, PilO VV93_RS13820 f0095ac62320b40e7416ecfd9878de1c 196 Gene3D G3DSA:3.30.70.60 92 192 8.9E-30 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VV93_RS13820 f0095ac62320b40e7416ecfd9878de1c 196 PIRSF PIRSF016482 1 196 1.3E-66 T 23-04-2016 IPR007445 Pilus assembly protein, PilO VV93_RS13820 f0095ac62320b40e7416ecfd9878de1c 196 PANTHER PTHR39555:SF1 1 192 3.0E-49 T 23-04-2016 VV93_RS13820 f0095ac62320b40e7416ecfd9878de1c 196 PANTHER PTHR39555 1 192 3.0E-49 T 23-04-2016 VV93_RS14820 b0f9c75157877c3206a06719a952484b 419 Gene3D G3DSA:1.10.720.10 1 47 1.5E-22 T 23-04-2016 VV93_RS14820 b0f9c75157877c3206a06719a952484b 419 PANTHER PTHR15184 54 141 1.2E-199 T 23-04-2016 VV93_RS14820 b0f9c75157877c3206a06719a952484b 419 PANTHER PTHR15184 160 418 1.2E-199 T 23-04-2016 VV93_RS14820 b0f9c75157877c3206a06719a952484b 419 SMART SM00357 52 118 1.7E-17 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 VV93_RS14820 b0f9c75157877c3206a06719a952484b 419 SMART SM00382 170 355 9.9E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS14820 b0f9c75157877c3206a06719a952484b 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.4E-220 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VV93_RS14820 b0f9c75157877c3206a06719a952484b 419 Gene3D G3DSA:3.40.50.300 132 418 1.8E-106 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14820 b0f9c75157877c3206a06719a952484b 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 253.558 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VV93_RS14820 b0f9c75157877c3206a06719a952484b 419 SUPERFAMILY SSF50249 48 125 7.42E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS14820 b0f9c75157877c3206a06719a952484b 419 SMART SM00959 5 47 1.3E-18 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 VV93_RS14820 b0f9c75157877c3206a06719a952484b 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.8E-22 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS14820 b0f9c75157877c3206a06719a952484b 419 SUPERFAMILY SSF68912 1 46 2.24E-12 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 VV93_RS14820 b0f9c75157877c3206a06719a952484b 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 2.4E-18 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 VV93_RS14820 b0f9c75157877c3206a06719a952484b 419 SUPERFAMILY SSF52540 90 371 1.6E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14820 b0f9c75157877c3206a06719a952484b 419 Gene3D G3DSA:2.40.50.140 49 117 4.2E-36 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS14820 b0f9c75157877c3206a06719a952484b 419 PANTHER PTHR15184:SF34 54 141 1.2E-199 T 23-04-2016 VV93_RS14820 b0f9c75157877c3206a06719a952484b 419 PANTHER PTHR15184:SF34 160 418 1.2E-199 T 23-04-2016 VV93_RS14820 b0f9c75157877c3206a06719a952484b 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 6.8E-32 T 23-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 VV93_RS03130 ec9fdaddbf19b77550e2da596a98a2cd 382 PANTHER PTHR31817:SF4 77 109 5.0E-45 T 23-04-2016 VV93_RS03130 ec9fdaddbf19b77550e2da596a98a2cd 382 PANTHER PTHR31817:SF4 132 359 5.0E-45 T 23-04-2016 VV93_RS03130 ec9fdaddbf19b77550e2da596a98a2cd 382 PANTHER PTHR31817:SF4 17 61 5.0E-45 T 23-04-2016 VV93_RS03130 ec9fdaddbf19b77550e2da596a98a2cd 382 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 17 376 7.9E-149 T 23-04-2016 IPR012656 Conserved hypothetical protein CHP02421, QEGLA VV93_RS03130 ec9fdaddbf19b77550e2da596a98a2cd 382 SMART SM01154 43 382 1.1E-155 T 23-04-2016 IPR012548 Protein of unknown function DUF1704 VV93_RS03130 ec9fdaddbf19b77550e2da596a98a2cd 382 Pfam PF08014 Domain of unknown function (DUF1704) 44 380 4.3E-116 T 23-04-2016 IPR012548 Protein of unknown function DUF1704 VV93_RS03130 ec9fdaddbf19b77550e2da596a98a2cd 382 PANTHER PTHR31817 77 109 5.0E-45 T 23-04-2016 VV93_RS03130 ec9fdaddbf19b77550e2da596a98a2cd 382 PANTHER PTHR31817 132 359 5.0E-45 T 23-04-2016 VV93_RS03130 ec9fdaddbf19b77550e2da596a98a2cd 382 PANTHER PTHR31817 17 61 5.0E-45 T 23-04-2016 VV93_RS01565 c7b0898de4c143e14ef7505c9330625a 396 PANTHER PTHR10366:SF256 34 254 1.3E-23 T 23-04-2016 VV93_RS01565 c7b0898de4c143e14ef7505c9330625a 396 SUPERFAMILY SSF51735 34 278 7.3E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01565 c7b0898de4c143e14ef7505c9330625a 396 Gene3D G3DSA:3.40.50.720 33 243 4.6E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01565 c7b0898de4c143e14ef7505c9330625a 396 Pfam PF02719 Polysaccharide biosynthesis protein 36 278 3.1E-45 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VV93_RS01565 c7b0898de4c143e14ef7505c9330625a 396 PANTHER PTHR10366 34 254 1.3E-23 T 23-04-2016 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 PANTHER PTHR11817 1 464 6.7E-254 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.2E-27 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 23-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 8.9E-186 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 Gene3D G3DSA:3.20.20.60 169 326 3.7E-117 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 Gene3D G3DSA:3.20.20.60 2 72 3.7E-117 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 8.7E-80 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 8.7E-80 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 8.7E-80 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 8.7E-80 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 8.7E-80 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 8.7E-80 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 8.7E-80 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 1.7E-154 T 23-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 SUPERFAMILY SSF52935 323 469 7.59E-34 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 Gene3D G3DSA:2.40.33.10 73 168 3.1E-32 T 23-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 SUPERFAMILY SSF50800 70 167 4.88E-29 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 Gene3D G3DSA:3.40.1380.20 327 468 1.4E-43 T 23-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 SUPERFAMILY SSF51621 1 74 1.4E-101 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS02390 f53eaed6827a280771a34539a42cef05 470 SUPERFAMILY SSF51621 156 339 1.4E-101 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS03555 dcdfd6e09a2168cf83324cc3b4ce2703 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.471 T 23-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 VV93_RS03555 dcdfd6e09a2168cf83324cc3b4ce2703 404 PIRSF PIRSF005572 2 384 1.4E-138 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VV93_RS03555 dcdfd6e09a2168cf83324cc3b4ce2703 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VV93_RS03555 dcdfd6e09a2168cf83324cc3b4ce2703 404 Gene3D G3DSA:3.40.640.10 17 252 8.7E-98 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS03555 dcdfd6e09a2168cf83324cc3b4ce2703 404 Gene3D G3DSA:3.90.1150.10 253 374 1.6E-51 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS03555 dcdfd6e09a2168cf83324cc3b4ce2703 404 PANTHER PTHR11601 4 404 8.5E-238 T 23-04-2016 VV93_RS03555 dcdfd6e09a2168cf83324cc3b4ce2703 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 1.2E-229 T 23-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 VV93_RS03555 dcdfd6e09a2168cf83324cc3b4ce2703 404 Pfam PF00266 Aminotransferase class-V 5 368 1.4E-89 T 23-04-2016 IPR000192 Aminotransferase class V domain VV93_RS03555 dcdfd6e09a2168cf83324cc3b4ce2703 404 PANTHER PTHR11601:SF45 4 404 8.5E-238 T 23-04-2016 VV93_RS03555 dcdfd6e09a2168cf83324cc3b4ce2703 404 SUPERFAMILY SSF53383 5 391 1.02E-115 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 SUPERFAMILY SSF55785 352 462 4.89E-16 T 23-04-2016 IPR000014 PAS domain VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 SUPERFAMILY SSF55073 470 618 8.63E-37 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 SMART SM00091 340 407 7.4E-4 T 23-04-2016 IPR000014 PAS domain VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 462 617 1.4E-39 T 23-04-2016 IPR000160 GGDEF domain VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 SMART SM00267 454 619 4.5E-46 T 23-04-2016 IPR000160 GGDEF domain VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 344 461 8.9E-12 T 23-04-2016 IPR000014 PAS domain VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 SUPERFAMILY SSF103190 207 298 3.06E-22 T 23-04-2016 IPR029151 Periplasmic sensor domain-like VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 Gene3D G3DSA:3.30.70.270 467 619 3.6E-41 T 23-04-2016 VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 Gene3D G3DSA:1.20.5.170 27 72 7.3E-22 T 23-04-2016 VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 Pfam PF13426 PAS domain 352 452 1.1E-9 T 23-04-2016 IPR000014 PAS domain VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 PANTHER PTHR10799 500 616 3.1E-18 T 23-04-2016 VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 PANTHER PTHR10799 103 256 3.1E-18 T 23-04-2016 VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 Gene3D G3DSA:3.30.450.20 207 300 1.7E-25 T 23-04-2016 VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 SUPERFAMILY SSF103190 36 206 1.88E-42 T 23-04-2016 IPR029151 Periplasmic sensor domain-like VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 Gene3D G3DSA:3.30.450.20 348 456 3.7E-14 T 23-04-2016 VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 Gene3D G3DSA:3.30.450.20 73 206 2.4E-35 T 23-04-2016 VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 467 615 1.8E-36 T 23-04-2016 IPR000160 GGDEF domain VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 PANTHER PTHR10799:SF750 103 256 3.1E-18 T 23-04-2016 VV93_RS02375 389f190cd630fad4b3bbc1ada5148ad5 626 PANTHER PTHR10799:SF750 500 616 3.1E-18 T 23-04-2016 VV93_RS07255 a4828781849dc71dea1fee4140f6a805 393 Pfam PF00005 ABC transporter 40 181 1.8E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS07255 a4828781849dc71dea1fee4140f6a805 393 PANTHER PTHR24220:SF448 24 266 7.6E-167 T 23-04-2016 VV93_RS07255 a4828781849dc71dea1fee4140f6a805 393 SUPERFAMILY SSF52540 22 262 2.4E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07255 a4828781849dc71dea1fee4140f6a805 393 SMART SM00382 48 231 8.0E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS07255 a4828781849dc71dea1fee4140f6a805 393 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS07255 a4828781849dc71dea1fee4140f6a805 393 Gene3D G3DSA:3.40.50.300 21 254 3.9E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07255 a4828781849dc71dea1fee4140f6a805 393 Gene3D G3DSA:2.40.50.140 298 358 3.3E-7 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS07255 a4828781849dc71dea1fee4140f6a805 393 Gene3D G3DSA:2.40.50.100 259 297 2.1E-7 T 23-04-2016 VV93_RS07255 a4828781849dc71dea1fee4140f6a805 393 Gene3D G3DSA:2.40.50.100 361 374 2.1E-7 T 23-04-2016 VV93_RS07255 a4828781849dc71dea1fee4140f6a805 393 SUPERFAMILY SSF50331 256 374 1.38E-20 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal VV93_RS07255 a4828781849dc71dea1fee4140f6a805 393 PANTHER PTHR24220 24 266 7.6E-167 T 23-04-2016 VV93_RS08915 b745f36e11c83793610e93bd10d1b5b6 401 Gene3D G3DSA:1.20.1250.20 208 391 1.9E-9 T 23-04-2016 VV93_RS08915 b745f36e11c83793610e93bd10d1b5b6 401 Gene3D G3DSA:1.20.1250.20 11 194 7.3E-33 T 23-04-2016 VV93_RS08915 b745f36e11c83793610e93bd10d1b5b6 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 384 2.1E-61 T 23-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 VV93_RS08915 b745f36e11c83793610e93bd10d1b5b6 401 PANTHER PTHR23502 10 401 4.8E-195 T 23-04-2016 VV93_RS08915 b745f36e11c83793610e93bd10d1b5b6 401 PANTHER PTHR23502:SF32 10 401 4.8E-195 T 23-04-2016 VV93_RS08915 b745f36e11c83793610e93bd10d1b5b6 401 SUPERFAMILY SSF103473 9 389 1.15E-58 T 23-04-2016 IPR020846 Major facilitator superfamily domain VV93_RS08915 b745f36e11c83793610e93bd10d1b5b6 401 Pfam PF07690 Major Facilitator Superfamily 15 354 6.6E-44 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV93_RS01640 21d5ed1dd7a41298475047f358fbba74 749 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 51 743 1.2E-264 T 23-04-2016 IPR010344 Exopolysaccharide biosynthesis protein YbjH VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 TIGRFAM TIGR00593 pola: DNA polymerase I 9 931 1.4E-288 T 23-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 PANTHER PTHR10133:SF27 6 288 0.0 T 23-04-2016 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 PANTHER PTHR10133:SF27 318 930 0.0 T 23-04-2016 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 Pfam PF00476 DNA polymerase family A 553 928 2.9E-157 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:1.10.150.20 187 253 1.8E-25 T 23-04-2016 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 SUPERFAMILY SSF53098 335 520 5.24E-54 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 SUPERFAMILY SSF56672 526 931 5.56E-159 T 23-04-2016 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 5.4E-28 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 SUPERFAMILY SSF47807 171 291 2.54E-29 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 ProSitePatterns PS00447 DNA polymerase family A signature. 756 775 - T 23-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 PANTHER PTHR10133 6 288 0.0 T 23-04-2016 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 PANTHER PTHR10133 318 930 0.0 T 23-04-2016 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:3.40.50.1010 8 186 1.6E-74 T 23-04-2016 IPR029060 PIN domain-like VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 Pfam PF01612 3'-5' exonuclease 332 516 2.4E-38 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 SMART SM00482 688 895 5.6E-119 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 SMART SM00279 173 208 1.2E-13 T 23-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 SMART SM00475 7 267 9.8E-123 T 23-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:3.30.420.10 331 544 1.1E-84 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:3.30.70.370 821 931 4.1E-65 T 23-04-2016 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:3.30.70.370 666 713 4.1E-65 T 23-04-2016 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:1.10.150.20 714 820 2.3E-36 T 23-04-2016 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 847 863 2.1E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 815 826 2.1E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 657 679 2.1E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 756 781 2.1E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 878 891 2.1E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 793 804 2.1E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 702 725 2.1E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 680 695 2.1E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 732 745 2.1E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 SMART SM00474 332 519 9.8E-41 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 6.0E-55 T 23-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:1.20.1060.10 545 665 7.2E-38 T 23-04-2016 VV93_RS00940 80f34bf5ad1ff879346e8bc5a5073679 931 SUPERFAMILY SSF88723 7 170 1.86E-58 T 23-04-2016 IPR029060 PIN domain-like VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 Gene3D G3DSA:1.20.200.10 108 374 9.4E-103 T 23-04-2016 VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 6.8E-202 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 Pfam PF00583 Acetyltransferase (GNAT) family 511 579 1.4E-6 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 Gene3D G3DSA:1.10.40.30 375 432 6.9E-30 T 23-04-2016 VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 SUPERFAMILY SSF48557 3 456 2.67E-141 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 PANTHER PTHR11444:SF3 3 456 8.9E-237 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 PIRSF PIRSF036456 1 624 0.0 T 23-04-2016 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 Pfam PF00206 Lyase 6 301 1.3E-87 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 6.5E-28 T 23-04-2016 IPR000362 Fumarate lyase family VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 6.5E-28 T 23-04-2016 IPR000362 Fumarate lyase family VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 6.5E-28 T 23-04-2016 IPR000362 Fumarate lyase family VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 6.5E-28 T 23-04-2016 IPR000362 Fumarate lyase family VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 Gene3D G3DSA:3.40.630.30 464 601 1.5E-26 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 Gene3D G3DSA:1.10.275.10 1 107 7.6E-36 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 SUPERFAMILY SSF55729 461 588 4.43E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 PANTHER PTHR11444 3 456 8.9E-237 T 23-04-2016 IPR000362 Fumarate lyase family VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 4.6E-24 T 23-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.384 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.0E-67 T 23-04-2016 VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.0E-67 T 23-04-2016 VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.0E-67 T 23-04-2016 VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.0E-67 T 23-04-2016 VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.0E-67 T 23-04-2016 VV93_RS13850 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.0E-67 T 23-04-2016 VV93_RS01065 6ea0021a75bacb8634d262f44d2ff2f4 405 PANTHER PTHR30012 2 404 3.0E-243 T 23-04-2016 VV93_RS01065 6ea0021a75bacb8634d262f44d2ff2f4 405 PANTHER PTHR30012:SF6 2 404 3.0E-243 T 23-04-2016 VV93_RS01065 6ea0021a75bacb8634d262f44d2ff2f4 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 165 193 - T 23-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VV93_RS01065 6ea0021a75bacb8634d262f44d2ff2f4 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 402 2.2E-154 T 23-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 VV93_RS01065 6ea0021a75bacb8634d262f44d2ff2f4 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 2.8E-33 T 23-04-2016 IPR018076 Type II secretion system F domain VV93_RS01065 6ea0021a75bacb8634d262f44d2ff2f4 405 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 2.6E-24 T 23-04-2016 IPR018076 Type II secretion system F domain VV93_RS01065 6ea0021a75bacb8634d262f44d2ff2f4 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 4.8E-36 T 23-04-2016 IPR003004 GspF/PilC family VV93_RS01065 6ea0021a75bacb8634d262f44d2ff2f4 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 4.8E-36 T 23-04-2016 IPR003004 GspF/PilC family VV93_RS01065 6ea0021a75bacb8634d262f44d2ff2f4 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 4.8E-36 T 23-04-2016 IPR003004 GspF/PilC family VV93_RS01065 6ea0021a75bacb8634d262f44d2ff2f4 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 4.8E-36 T 23-04-2016 IPR003004 GspF/PilC family VV93_RS12765 ea7f0e00fe6efa787680d4bd9eb0229c 347 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 29.159 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS12765 ea7f0e00fe6efa787680d4bd9eb0229c 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 171 7.8E-42 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS12765 ea7f0e00fe6efa787680d4bd9eb0229c 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 185 337 3.2E-20 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS12765 ea7f0e00fe6efa787680d4bd9eb0229c 347 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 23-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS12765 ea7f0e00fe6efa787680d4bd9eb0229c 347 PANTHER PTHR13326 10 339 1.8E-69 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS12765 ea7f0e00fe6efa787680d4bd9eb0229c 347 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 9 225 1.6E-54 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS12765 ea7f0e00fe6efa787680d4bd9eb0229c 347 SUPERFAMILY SSF55120 7 339 4.6E-97 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS01225 f9b89b6e42ed306bed0e0ceb2f825ab8 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 8.5E-34 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS01225 f9b89b6e42ed306bed0e0ceb2f825ab8 341 Gene3D G3DSA:1.10.3720.10 108 328 3.1E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS01225 f9b89b6e42ed306bed0e0ceb2f825ab8 341 PANTHER PTHR30465 1 339 1.1E-120 T 23-04-2016 VV93_RS01225 f9b89b6e42ed306bed0e0ceb2f825ab8 341 PANTHER PTHR30465:SF66 1 339 1.1E-120 T 23-04-2016 VV93_RS01225 f9b89b6e42ed306bed0e0ceb2f825ab8 341 SUPERFAMILY SSF161098 108 321 1.83E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 Pfam PF01131 DNA topoisomerase 161 597 7.0E-116 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.9E-26 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.9E-26 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.9E-26 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.9E-26 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.9E-26 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 SMART SM00437 284 563 1.1E-86 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 SMART SM00436 129 224 5.8E-32 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 647 64.949 T 23-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 PANTHER PTHR11390:SF21 1 508 2.5E-178 T 23-04-2016 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 PANTHER PTHR11390:SF21 526 611 2.5E-178 T 23-04-2016 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 SUPERFAMILY SSF56712 3 612 6.02E-185 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 Gene3D G3DSA:2.70.20.10 219 256 2.1E-41 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 Gene3D G3DSA:2.70.20.10 374 493 2.1E-41 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 SMART SM00493 2 125 1.8E-27 T 23-04-2016 IPR006171 Toprim domain VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 PANTHER PTHR11390 1 508 2.5E-178 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 PANTHER PTHR11390 526 611 2.5E-178 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 638 5.0E-234 T 23-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 Gene3D G3DSA:3.40.50.140 3 154 8.5E-47 T 23-04-2016 IPR006171 Toprim domain VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 Gene3D G3DSA:1.10.460.10 495 612 3.9E-54 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 Gene3D G3DSA:1.10.460.10 162 218 3.9E-54 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VV93_RS05515 f21c233edf36b8fd05ee3ece68aa7eb3 656 Pfam PF01751 Toprim domain 4 134 6.4E-17 T 23-04-2016 IPR006171 Toprim domain VV93_RS07150 159fc714003b1942e576272e51978715 364 PANTHER PTHR13393:SF0 29 236 4.3E-113 T 23-04-2016 VV93_RS07150 159fc714003b1942e576272e51978715 364 PANTHER PTHR13393:SF0 259 356 4.3E-113 T 23-04-2016 VV93_RS07150 159fc714003b1942e576272e51978715 364 Pfam PF05971 Protein of unknown function (DUF890) 42 352 4.5E-122 T 23-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VV93_RS07150 159fc714003b1942e576272e51978715 364 PIRSF PIRSF029038 31 364 9.4E-158 T 23-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VV93_RS07150 159fc714003b1942e576272e51978715 364 PANTHER PTHR13393 29 236 4.3E-113 T 23-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VV93_RS07150 159fc714003b1942e576272e51978715 364 PANTHER PTHR13393 259 356 4.3E-113 T 23-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VV93_RS07150 159fc714003b1942e576272e51978715 364 Gene3D G3DSA:3.40.50.150 141 237 1.7E-7 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS07150 159fc714003b1942e576272e51978715 364 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 42 354 53.078 T 23-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VV93_RS07150 159fc714003b1942e576272e51978715 364 SUPERFAMILY SSF53335 80 351 2.6E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00605 3d4bf18cd1605f556046365099266f90 809 Pfam PF01553 Acyltransferase 289 424 9.0E-24 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VV93_RS00605 3d4bf18cd1605f556046365099266f90 809 PIRSF PIRSF000437 19 809 0.0 T 23-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VV93_RS00605 3d4bf18cd1605f556046365099266f90 809 PANTHER PTHR12563 144 774 0.0 T 23-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VV93_RS00605 3d4bf18cd1605f556046365099266f90 809 PANTHER PTHR12563 1 118 0.0 T 23-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VV93_RS00605 3d4bf18cd1605f556046365099266f90 809 PANTHER PTHR12563:SF14 144 774 0.0 T 23-04-2016 VV93_RS00605 3d4bf18cd1605f556046365099266f90 809 PANTHER PTHR12563:SF14 1 118 0.0 T 23-04-2016 VV93_RS00605 3d4bf18cd1605f556046365099266f90 809 SMART SM00563 300 427 3.2E-27 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VV93_RS00605 3d4bf18cd1605f556046365099266f90 809 PIRSF PIRSF500064 3 809 0.0 T 23-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VV93_RS00605 3d4bf18cd1605f556046365099266f90 809 Gene3D G3DSA:3.40.1130.10 284 443 5.1E-4 T 23-04-2016 VV93_RS00605 3d4bf18cd1605f556046365099266f90 809 SUPERFAMILY SSF69593 281 488 4.71E-25 T 23-04-2016 VV93_RS00605 3d4bf18cd1605f556046365099266f90 809 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.626 T 23-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VV93_RS00605 3d4bf18cd1605f556046365099266f90 809 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 23-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VV93_RS12500 45229f83a32c47194de10f3cb0110b64 307 PANTHER PTHR24220:SF305 5 303 2.9E-177 T 23-04-2016 VV93_RS12500 45229f83a32c47194de10f3cb0110b64 307 SUPERFAMILY SSF52540 3 232 3.48E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12500 45229f83a32c47194de10f3cb0110b64 307 PANTHER PTHR24220 5 303 2.9E-177 T 23-04-2016 VV93_RS12500 45229f83a32c47194de10f3cb0110b64 307 SMART SM00382 29 213 1.5E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS12500 45229f83a32c47194de10f3cb0110b64 307 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS12500 45229f83a32c47194de10f3cb0110b64 307 Pfam PF00005 ABC transporter 20 164 8.9E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS12500 45229f83a32c47194de10f3cb0110b64 307 Gene3D G3DSA:3.40.50.300 3 226 1.1E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07525 8e8641e176b00c428e220dbfe0060f79 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS07525 8e8641e176b00c428e220dbfe0060f79 458 Pfam PF01235 Sodium:alanine symporter family 54 449 4.2E-138 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS07525 8e8641e176b00c428e220dbfe0060f79 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 441 7.4E-152 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS07525 8e8641e176b00c428e220dbfe0060f79 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 4.3E-52 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS07525 8e8641e176b00c428e220dbfe0060f79 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 4.3E-52 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS07525 8e8641e176b00c428e220dbfe0060f79 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 4.3E-52 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS07525 8e8641e176b00c428e220dbfe0060f79 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 4.3E-52 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS07525 8e8641e176b00c428e220dbfe0060f79 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 4.3E-52 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS07525 8e8641e176b00c428e220dbfe0060f79 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 4.3E-52 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS07525 8e8641e176b00c428e220dbfe0060f79 458 PANTHER PTHR30330:SF3 1 444 9.6E-227 T 23-04-2016 VV93_RS07525 8e8641e176b00c428e220dbfe0060f79 458 PANTHER PTHR30330 1 444 9.6E-227 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS13110 92c1c59b832d5cc17ac3490433646b3e 379 Gene3D G3DSA:1.10.530.10 181 375 4.1E-43 T 23-04-2016 VV93_RS13110 92c1c59b832d5cc17ac3490433646b3e 379 PANTHER PTHR21666:SF224 190 375 2.3E-48 T 23-04-2016 VV93_RS13110 92c1c59b832d5cc17ac3490433646b3e 379 SUPERFAMILY SSF53955 183 371 3.38E-37 T 23-04-2016 IPR023346 Lysozyme-like domain VV93_RS13110 92c1c59b832d5cc17ac3490433646b3e 379 PANTHER PTHR21666 190 375 2.3E-48 T 23-04-2016 VV93_RS13110 92c1c59b832d5cc17ac3490433646b3e 379 Pfam PF01464 Transglycosylase SLT domain 211 332 1.3E-27 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 VV93_RS13110 92c1c59b832d5cc17ac3490433646b3e 379 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 23-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VV93_RS13110 92c1c59b832d5cc17ac3490433646b3e 379 Pfam PF11873 Domain of unknown function (DUF3393) 6 206 4.1E-79 T 23-04-2016 IPR024570 Murein transglycosylase-C, N-terminal VV93_RS12230 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 Pfam PF02576 Putative ribosome maturation factor RimP 12 147 2.9E-49 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 VV93_RS12230 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 PANTHER PTHR33867 1 151 2.7E-57 T 23-04-2016 VV93_RS12230 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 Gene3D G3DSA:2.30.30.180 88 148 1.5E-14 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal VV93_RS12230 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 PANTHER PTHR33867:SF1 1 151 2.7E-57 T 23-04-2016 VV93_RS12230 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.907 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 VV93_RS12230 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 Gene3D G3DSA:3.30.300.70 2 80 1.4E-32 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal VV93_RS12230 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 SUPERFAMILY SSF75420 2 83 4.71E-26 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal VV93_RS12230 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 SUPERFAMILY SSF74942 84 151 1.57E-17 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal VV93_RS05090 01ef4768e2edbebe54c299ceec1af850 395 SUPERFAMILY SSF53901 7 236 5.21E-41 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS05090 01ef4768e2edbebe54c299ceec1af850 395 Gene3D G3DSA:3.40.47.10 11 236 1.3E-33 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS05090 01ef4768e2edbebe54c299ceec1af850 395 PANTHER PTHR11712 151 390 1.6E-56 T 23-04-2016 VV93_RS05090 01ef4768e2edbebe54c299ceec1af850 395 Gene3D G3DSA:3.40.47.10 249 391 4.2E-48 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS05090 01ef4768e2edbebe54c299ceec1af850 395 SUPERFAMILY SSF53901 210 391 3.03E-45 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS05090 01ef4768e2edbebe54c299ceec1af850 395 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site VV93_RS05090 01ef4768e2edbebe54c299ceec1af850 395 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 244 344 7.4E-27 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal VV93_RS05090 01ef4768e2edbebe54c299ceec1af850 395 PANTHER PTHR11712:SF273 151 390 1.6E-56 T 23-04-2016 VV93_RS05090 01ef4768e2edbebe54c299ceec1af850 395 SMART SM00825 Beta-ketoacyl synthase 35 338 2.6E-7 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VV93_RS05090 01ef4768e2edbebe54c299ceec1af850 395 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 80 236 4.7E-21 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VV93_RS01120 ec56d229d4255aad729e63a6fbd2ed47 194 SUPERFAMILY SSF89360 3 99 2.35E-22 T 23-04-2016 IPR000361 FeS cluster biogenesis VV93_RS01120 ec56d229d4255aad729e63a6fbd2ed47 194 PANTHER PTHR10072:SF37 1 99 3.6E-87 T 23-04-2016 VV93_RS01120 ec56d229d4255aad729e63a6fbd2ed47 194 PANTHER PTHR10072:SF37 149 191 3.6E-87 T 23-04-2016 VV93_RS01120 ec56d229d4255aad729e63a6fbd2ed47 194 Pfam PF01106 NifU-like domain 113 179 6.1E-19 T 23-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VV93_RS01120 ec56d229d4255aad729e63a6fbd2ed47 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 180 2.0E-28 T 23-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VV93_RS01120 ec56d229d4255aad729e63a6fbd2ed47 194 PANTHER PTHR10072 1 99 3.6E-87 T 23-04-2016 VV93_RS01120 ec56d229d4255aad729e63a6fbd2ed47 194 PANTHER PTHR10072 149 191 3.6E-87 T 23-04-2016 VV93_RS01120 ec56d229d4255aad729e63a6fbd2ed47 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 3 101 1.7E-12 T 23-04-2016 IPR000361 FeS cluster biogenesis VV93_RS01120 ec56d229d4255aad729e63a6fbd2ed47 194 SUPERFAMILY SSF117916 97 186 6.1E-22 T 23-04-2016 VV93_RS01120 ec56d229d4255aad729e63a6fbd2ed47 194 Gene3D G3DSA:2.60.300.12 3 99 8.7E-19 T 23-04-2016 IPR000361 FeS cluster biogenesis VV93_RS01120 ec56d229d4255aad729e63a6fbd2ed47 194 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 4 194 2.1E-95 T 23-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VV93_RS01120 ec56d229d4255aad729e63a6fbd2ed47 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 44.072 T 23-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VV93_RS05830 4d9c667fff3e8accf1297f5e7cfa44e9 396 PANTHER PTHR10314 6 393 3.5E-225 T 23-04-2016 VV93_RS05830 4d9c667fff3e8accf1297f5e7cfa44e9 396 SUPERFAMILY SSF53686 5 387 8.51E-142 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VV93_RS05830 4d9c667fff3e8accf1297f5e7cfa44e9 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.65 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VV93_RS05830 4d9c667fff3e8accf1297f5e7cfa44e9 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 5.6E-194 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VV93_RS05830 4d9c667fff3e8accf1297f5e7cfa44e9 396 PANTHER PTHR10314:SF3 6 393 3.5E-225 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VV93_RS05830 4d9c667fff3e8accf1297f5e7cfa44e9 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 9.0E-51 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VV93_RS05830 4d9c667fff3e8accf1297f5e7cfa44e9 396 PIRSF PIRSF001413 1 396 4.1E-168 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VV93_RS05830 4d9c667fff3e8accf1297f5e7cfa44e9 396 Gene3D G3DSA:3.40.50.1100 176 392 4.4E-94 T 23-04-2016 VV93_RS05830 4d9c667fff3e8accf1297f5e7cfa44e9 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 23-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VV93_RS05830 4d9c667fff3e8accf1297f5e7cfa44e9 396 Gene3D G3DSA:3.40.50.1100 96 175 9.4E-22 T 23-04-2016 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 SUPERFAMILY SSF50249 88 174 6.86E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.6E-230 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 SUPERFAMILY SSF50249 255 364 2.65E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 PANTHER PTHR10724:SF6 1 514 2.3E-275 T 23-04-2016 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.0E-96 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.0E-96 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.0E-96 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.0E-96 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.0E-96 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.0E-96 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.0E-96 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.0E-96 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.0E-96 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 Pfam PF00575 S1 RNA binding domain 449 520 8.7E-16 T 23-04-2016 IPR003029 S1 domain GO:0003676 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 Pfam PF00575 S1 RNA binding domain 275 347 4.0E-21 T 23-04-2016 IPR003029 S1 domain GO:0003676 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 Pfam PF00575 S1 RNA binding domain 189 260 2.6E-21 T 23-04-2016 IPR003029 S1 domain GO:0003676 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 Pfam PF00575 S1 RNA binding domain 18 86 1.2E-6 T 23-04-2016 IPR003029 S1 domain GO:0003676 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 Pfam PF00575 S1 RNA binding domain 104 171 1.1E-7 T 23-04-2016 IPR003029 S1 domain GO:0003676 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 Pfam PF00575 S1 RNA binding domain 362 434 1.7E-20 T 23-04-2016 IPR003029 S1 domain GO:0003676 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 SUPERFAMILY SSF50249 4 112 1.97E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 SUPERFAMILY SSF50249 429 539 7.38E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 SMART SM00316 190 260 7.7E-28 T 23-04-2016 IPR022967 RNA-binding domain, S1 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 SMART SM00316 103 171 1.8E-7 T 23-04-2016 IPR022967 RNA-binding domain, S1 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 SMART SM00316 19 87 4.9E-4 T 23-04-2016 IPR022967 RNA-binding domain, S1 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 SMART SM00316 449 520 1.1E-20 T 23-04-2016 IPR022967 RNA-binding domain, S1 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 SMART SM00316 362 434 2.3E-21 T 23-04-2016 IPR022967 RNA-binding domain, S1 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 SMART SM00316 275 347 8.1E-27 T 23-04-2016 IPR022967 RNA-binding domain, S1 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 Gene3D G3DSA:2.40.50.140 21 101 9.7E-11 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 Gene3D G3DSA:2.40.50.140 192 278 1.1E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 Gene3D G3DSA:2.40.50.140 279 362 4.9E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 SUPERFAMILY SSF50249 347 438 5.97E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 PIRSF PIRSF002111 1 534 5.3E-218 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 Gene3D G3DSA:2.40.50.140 363 442 3.2E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 Gene3D G3DSA:2.40.50.140 445 531 5.7E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 SUPERFAMILY SSF50249 189 277 1.42E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 Gene3D G3DSA:2.40.50.140 102 172 1.7E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS06250 838da8b9b914e31d0ca55317053f3798 556 PANTHER PTHR10724 1 514 2.3E-275 T 23-04-2016 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 Gene3D G3DSA:3.40.50.670 398 609 1.2E-78 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PANTHER PTHR10169:SF45 1 626 0.0 T 23-04-2016 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PANTHER PTHR10169 1 626 0.0 T 23-04-2016 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 SMART SM00387 27 173 7.3E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 7.5E-27 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 1.8E-123 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.8E-123 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 1.8E-123 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 1.8E-123 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.8E-123 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 1.8E-123 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.8E-123 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 1.8E-123 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.8E-123 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 1.8E-123 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 1.8E-123 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 1.8E-123 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 1.8E-123 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.8E-123 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 SUPERFAMILY SSF55874 5 215 8.75E-66 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 Pfam PF01751 Toprim domain 413 521 8.6E-12 T 23-04-2016 IPR006171 Toprim domain VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 SUPERFAMILY SSF56719 388 619 1.67E-79 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 Pfam PF00204 DNA gyrase B 218 384 2.6E-42 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 SUPERFAMILY SSF54211 217 382 1.65E-46 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 Gene3D G3DSA:3.30.230.10 217 390 2.5E-47 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.1E-57 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 1.1E-57 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 1.1E-57 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.1E-57 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 1.1E-57 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 1.1E-57 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.1E-57 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 1.1E-57 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 1.1E-57 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 1.5E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 Gene3D G3DSA:3.30.565.10 15 213 4.2E-76 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 SMART SM00433 34 622 2.7E-212 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS02695 fbab8d9692e9e2a7085e2422d42da5c0 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.928 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS07085 71bf512fa951e09b1adcc975a4e7e691 255 PANTHER PTHR34148 1 253 2.9E-50 T 23-04-2016 VV93_RS07085 71bf512fa951e09b1adcc975a4e7e691 255 PANTHER PTHR34148:SF1 1 253 2.9E-50 T 23-04-2016 VV93_RS07085 71bf512fa951e09b1adcc975a4e7e691 255 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 255 45.544 T 23-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 VV93_RS07085 71bf512fa951e09b1adcc975a4e7e691 255 Pfam PF02654 Cobalamin-5-phosphate synthase 14 247 4.5E-49 T 23-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 VV93_RS07050 0338822aa7a8beadae550bfd942e6e55 130 Pfam PF03846 Cell division inhibitor SulA 27 96 1.9E-5 T 23-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 VV93_RS07050 0338822aa7a8beadae550bfd942e6e55 130 SUPERFAMILY SSF52540 20 99 2.23E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07050 0338822aa7a8beadae550bfd942e6e55 130 Gene3D G3DSA:3.40.50.300 23 121 1.0E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13455 eae6bf91e6b6a46ce42d5dfef730f1de 481 PANTHER PTHR30624:SF4 13 481 6.1E-247 T 23-04-2016 VV93_RS13455 eae6bf91e6b6a46ce42d5dfef730f1de 481 PIRSF PIRSF004919 15 481 1.5E-141 T 23-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VV93_RS13455 eae6bf91e6b6a46ce42d5dfef730f1de 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 1.9E-61 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VV93_RS13455 eae6bf91e6b6a46ce42d5dfef730f1de 481 SUPERFAMILY SSF111283 18 480 4.45E-127 T 23-04-2016 VV93_RS13455 eae6bf91e6b6a46ce42d5dfef730f1de 481 PANTHER PTHR30624 13 481 6.1E-247 T 23-04-2016 VV93_RS08235 f34801394182eb4df99b339a98b6fd95 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 159 314 3.8E-42 T 23-04-2016 IPR000160 GGDEF domain VV93_RS08235 f34801394182eb4df99b339a98b6fd95 320 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 155 318 7.9E-52 T 23-04-2016 IPR000160 GGDEF domain VV93_RS08235 f34801394182eb4df99b339a98b6fd95 320 SMART SM00267 146 318 1.5E-52 T 23-04-2016 IPR000160 GGDEF domain VV93_RS08235 f34801394182eb4df99b339a98b6fd95 320 PANTHER PTHR10799 1 70 2.7E-29 T 23-04-2016 VV93_RS08235 f34801394182eb4df99b339a98b6fd95 320 PANTHER PTHR10799 190 317 2.7E-29 T 23-04-2016 VV93_RS08235 f34801394182eb4df99b339a98b6fd95 320 SUPERFAMILY SSF55073 162 318 1.65E-48 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS08235 f34801394182eb4df99b339a98b6fd95 320 Gene3D G3DSA:3.30.450.20 16 104 1.4E-9 T 23-04-2016 VV93_RS08235 f34801394182eb4df99b339a98b6fd95 320 SUPERFAMILY SSF55785 14 93 9.77E-9 T 23-04-2016 IPR000014 PAS domain VV93_RS08235 f34801394182eb4df99b339a98b6fd95 320 Gene3D G3DSA:3.30.70.270 159 319 1.5E-50 T 23-04-2016 VV93_RS08235 f34801394182eb4df99b339a98b6fd95 320 PANTHER PTHR10799:SF750 1 70 2.7E-29 T 23-04-2016 VV93_RS08235 f34801394182eb4df99b339a98b6fd95 320 PANTHER PTHR10799:SF750 190 317 2.7E-29 T 23-04-2016 VV93_RS01145 9076363920ecd4dc92aefc9e982994a6 160 PANTHER PTHR30437:SF6 2 158 2.6E-87 T 23-04-2016 VV93_RS01145 9076363920ecd4dc92aefc9e982994a6 160 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 50.933 T 23-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VV93_RS01145 9076363920ecd4dc92aefc9e982994a6 160 Gene3D G3DSA:1.10.287.180 3 75 6.3E-24 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VV93_RS01145 9076363920ecd4dc92aefc9e982994a6 160 PANTHER PTHR30437 2 158 2.6E-87 T 23-04-2016 VV93_RS01145 9076363920ecd4dc92aefc9e982994a6 160 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 3.1E-72 T 23-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VV93_RS01145 9076363920ecd4dc92aefc9e982994a6 160 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 27.236 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VV93_RS01145 9076363920ecd4dc92aefc9e982994a6 160 Gene3D G3DSA:3.10.50.30 76 156 3.4E-27 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VV93_RS01145 9076363920ecd4dc92aefc9e982994a6 160 SUPERFAMILY SSF46557 3 77 2.49E-26 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VV93_RS01145 9076363920ecd4dc92aefc9e982994a6 160 PIRSF PIRSF006092 1 158 1.6E-44 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VV93_RS01145 9076363920ecd4dc92aefc9e982994a6 160 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VV93_RS01145 9076363920ecd4dc92aefc9e982994a6 160 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VV93_RS01145 9076363920ecd4dc92aefc9e982994a6 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 1.5E-23 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VV93_RS01145 9076363920ecd4dc92aefc9e982994a6 160 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 6.5E-25 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VV93_RS01145 9076363920ecd4dc92aefc9e982994a6 160 SUPERFAMILY SSF54534 80 156 3.4E-20 T 23-04-2016 VV93_RS13710 1ae60777fd38ed56fd37b92d9467996a 220 Pfam PF13505 Outer membrane protein beta-barrel domain 11 220 6.2E-8 T 23-04-2016 IPR027385 Outer membrane protein beta-barrel VV93_RS13710 1ae60777fd38ed56fd37b92d9467996a 220 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 9 220 4.4E-50 T 23-04-2016 IPR026387 Outer membrane protein VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 PANTHER PTHR11777 1 860 0.0 T 23-04-2016 VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 199.044 T 23-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 Gene3D G3DSA:3.30.930.10 3 251 5.6E-124 T 23-04-2016 VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 SUPERFAMILY SSF50447 454 551 1.09E-18 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 3.1E-18 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 1.4E-227 T 23-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 SUPERFAMILY SSF101353 255 462 5.36E-60 T 23-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 SUPERFAMILY SSF55186 551 709 2.35E-52 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 Pfam PF02272 DHHA1 domain 786 853 2.4E-15 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 SMART SM00863 652 695 1.1E-21 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 SUPERFAMILY SSF55681 3 254 2.73E-108 T 23-04-2016 VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 Gene3D G3DSA:3.40.50.720 706 796 8.5E-4 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 PANTHER PTHR11777:SF9 1 860 0.0 T 23-04-2016 VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 1.0E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.0E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 1.0E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 1.0E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VV93_RS12720 ceacba304a4d2c346042bfb0583b4b2e 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 1.0E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VV93_RS22540 bedcbcb5b215ae3a6cfd01fd62e1e242 294 PANTHER PTHR32060 22 289 5.2E-117 T 23-04-2016 VV93_RS22540 bedcbcb5b215ae3a6cfd01fd62e1e242 294 Pfam PF08180 B melanoma antigen family 24 51 2.5E-13 T 23-04-2016 IPR012530 B melanoma antigen VV93_RS22540 bedcbcb5b215ae3a6cfd01fd62e1e242 294 Gene3D G3DSA:3.30.750.44 177 272 5.8E-6 T 23-04-2016 VV93_RS22540 bedcbcb5b215ae3a6cfd01fd62e1e242 294 SUPERFAMILY SSF52096 180 279 9.94E-12 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS22540 bedcbcb5b215ae3a6cfd01fd62e1e242 294 PANTHER PTHR32060:SF11 22 289 5.2E-117 T 23-04-2016 VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 Pfam PF03486 HI0933-like protein 5 393 4.1E-156 T 23-04-2016 VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 1.2E-8 T 23-04-2016 VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 1.2E-8 T 23-04-2016 VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.2E-8 T 23-04-2016 VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 SUPERFAMILY SSF160996 191 339 9.29E-44 T 23-04-2016 VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 PANTHER PTHR10617:SF103 1 287 1.0E-130 T 23-04-2016 VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 PANTHER PTHR10617:SF103 331 395 1.0E-130 T 23-04-2016 VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 SUPERFAMILY SSF51905 1 189 3.84E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 SUPERFAMILY SSF51905 338 395 3.84E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 Gene3D G3DSA:2.40.30.10 190 270 2.0E-28 T 23-04-2016 VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 Gene3D G3DSA:3.50.50.60 340 393 1.4E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 Gene3D G3DSA:3.50.50.60 2 187 1.4E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 393 3.8E-132 T 23-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 370 4.3E-6 T 23-04-2016 VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 4.3E-6 T 23-04-2016 VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.3E-6 T 23-04-2016 VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 Gene3D G3DSA:1.10.8.260 271 323 5.7E-23 T 23-04-2016 IPR023166 HI0933 insert-like domain VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 PANTHER PTHR10617 1 287 1.0E-130 T 23-04-2016 VV93_RS00395 a532e81dff31e8465562988b980ba3e6 395 PANTHER PTHR10617 331 395 1.0E-130 T 23-04-2016 VV93_RS05130 7fa75599c4d0816df069464721da0f18 455 PANTHER PTHR24095 317 444 2.9E-16 T 23-04-2016 VV93_RS05130 7fa75599c4d0816df069464721da0f18 455 Gene3D G3DSA:3.30.300.30 350 453 7.5E-13 T 23-04-2016 VV93_RS05130 7fa75599c4d0816df069464721da0f18 455 PANTHER PTHR24095:SF43 317 444 2.9E-16 T 23-04-2016 VV93_RS05130 7fa75599c4d0816df069464721da0f18 455 Gene3D G3DSA:3.40.50.980 146 295 2.0E-12 T 23-04-2016 VV93_RS05130 7fa75599c4d0816df069464721da0f18 455 SUPERFAMILY SSF56801 30 454 2.75E-52 T 23-04-2016 VV93_RS05130 7fa75599c4d0816df069464721da0f18 455 Gene3D G3DSA:3.40.50.980 48 145 6.9E-8 T 23-04-2016 VV93_RS05130 7fa75599c4d0816df069464721da0f18 455 Pfam PF00501 AMP-binding enzyme 22 307 5.3E-16 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VV93_RS03520 cc669eed0a93a8019c1e5c9fa6c5ffc7 607 Gene3D G3DSA:1.20.1640.10 422 599 2.4E-25 T 23-04-2016 VV93_RS03520 cc669eed0a93a8019c1e5c9fa6c5ffc7 607 Pfam PF02355 Protein export membrane protein 425 586 5.0E-19 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VV93_RS03520 cc669eed0a93a8019c1e5c9fa6c5ffc7 607 PANTHER PTHR30081 1 162 1.3E-224 T 23-04-2016 VV93_RS03520 cc669eed0a93a8019c1e5c9fa6c5ffc7 607 PANTHER PTHR30081 216 274 1.3E-224 T 23-04-2016 VV93_RS03520 cc669eed0a93a8019c1e5c9fa6c5ffc7 607 PANTHER PTHR30081 305 605 1.3E-224 T 23-04-2016 VV93_RS03520 cc669eed0a93a8019c1e5c9fa6c5ffc7 607 Pfam PF07549 SecD/SecF GG Motif 104 130 2.8E-7 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VV93_RS03520 cc669eed0a93a8019c1e5c9fa6c5ffc7 607 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 337 586 1.3E-82 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VV93_RS03520 cc669eed0a93a8019c1e5c9fa6c5ffc7 607 PRINTS PR00702 Acriflavin resistance protein family signature 495 519 3.5E-5 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS03520 cc669eed0a93a8019c1e5c9fa6c5ffc7 607 PRINTS PR00702 Acriflavin resistance protein family signature 570 593 3.5E-5 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS03520 cc669eed0a93a8019c1e5c9fa6c5ffc7 607 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 3.5E-5 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS03520 cc669eed0a93a8019c1e5c9fa6c5ffc7 607 PANTHER PTHR30081:SF1 1 162 1.3E-224 T 23-04-2016 VV93_RS03520 cc669eed0a93a8019c1e5c9fa6c5ffc7 607 PANTHER PTHR30081:SF1 216 274 1.3E-224 T 23-04-2016 VV93_RS03520 cc669eed0a93a8019c1e5c9fa6c5ffc7 607 PANTHER PTHR30081:SF1 305 605 1.3E-224 T 23-04-2016 VV93_RS03520 cc669eed0a93a8019c1e5c9fa6c5ffc7 607 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 606 47.825 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VV93_RS03520 cc669eed0a93a8019c1e5c9fa6c5ffc7 607 SUPERFAMILY SSF82866 402 598 4.45E-45 T 23-04-2016 VV93_RS03520 cc669eed0a93a8019c1e5c9fa6c5ffc7 607 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 112 593 2.0E-151 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VV93_RS03520 cc669eed0a93a8019c1e5c9fa6c5ffc7 607 Pfam PF13721 SecD export protein N-terminal TM region 1 92 5.3E-29 T 23-04-2016 IPR027398 SecD export protein N-terminal TM domain VV93_RS14610 225876598167280d0e4c6eab3062d158 196 Gene3D G3DSA:1.20.1590.10 1 195 9.8E-83 T 23-04-2016 IPR023381 YP001051499.1-like domain VV93_RS14610 225876598167280d0e4c6eab3062d158 196 Pfam PF04222 Protein of unknown function (DUF416) 6 194 2.0E-74 T 23-04-2016 IPR007338 Protein of unknown function DUF416 VV93_RS00970 3640fd3cc66637adc4aae7f82389ce89 463 PANTHER PTHR13932:SF6 5 457 7.0E-262 T 23-04-2016 VV93_RS00970 3640fd3cc66637adc4aae7f82389ce89 463 PANTHER PTHR13932 5 457 7.0E-262 T 23-04-2016 VV93_RS00970 3640fd3cc66637adc4aae7f82389ce89 463 Gene3D G3DSA:3.80.30.20 59 290 3.3E-31 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VV93_RS00970 3640fd3cc66637adc4aae7f82389ce89 463 SMART SM00729 58 278 3.1E-52 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VV93_RS00970 3640fd3cc66637adc4aae7f82389ce89 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 14 463 5.9E-208 T 23-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 VV93_RS00970 3640fd3cc66637adc4aae7f82389ce89 463 Pfam PF04055 Radical SAM superfamily 63 234 3.6E-18 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VV93_RS00970 3640fd3cc66637adc4aae7f82389ce89 463 PIRSF PIRSF000167 9 460 2.2E-172 T 23-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 VV93_RS00970 3640fd3cc66637adc4aae7f82389ce89 463 Pfam PF06969 HemN C-terminal domain 369 437 7.3E-11 T 23-04-2016 IPR010723 HemN, C-terminal VV93_RS00970 3640fd3cc66637adc4aae7f82389ce89 463 SUPERFAMILY SSF102114 12 450 4.58E-143 T 23-04-2016 VV93_RS14740 71bf2ee74835a960a37bab4a2e41cd3e 203 Pfam PF13592 Winged helix-turn helix 99 156 3.5E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS14740 71bf2ee74835a960a37bab4a2e41cd3e 203 SUPERFAMILY SSF46689 16 132 3.4E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14740 71bf2ee74835a960a37bab4a2e41cd3e 203 Pfam PF13551 Winged helix-turn helix 24 83 1.2E-13 T 23-04-2016 VV93_RS14740 71bf2ee74835a960a37bab4a2e41cd3e 203 Gene3D G3DSA:1.10.10.60 20 89 1.6E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14960 71bf2ee74835a960a37bab4a2e41cd3e 203 Pfam PF13592 Winged helix-turn helix 99 156 3.5E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS14960 71bf2ee74835a960a37bab4a2e41cd3e 203 SUPERFAMILY SSF46689 16 132 3.4E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14960 71bf2ee74835a960a37bab4a2e41cd3e 203 Pfam PF13551 Winged helix-turn helix 24 83 1.2E-13 T 23-04-2016 VV93_RS14960 71bf2ee74835a960a37bab4a2e41cd3e 203 Gene3D G3DSA:1.10.10.60 20 89 1.6E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS13645 71bf2ee74835a960a37bab4a2e41cd3e 203 Pfam PF13592 Winged helix-turn helix 99 156 3.5E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS13645 71bf2ee74835a960a37bab4a2e41cd3e 203 SUPERFAMILY SSF46689 16 132 3.4E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS13645 71bf2ee74835a960a37bab4a2e41cd3e 203 Pfam PF13551 Winged helix-turn helix 24 83 1.2E-13 T 23-04-2016 VV93_RS13645 71bf2ee74835a960a37bab4a2e41cd3e 203 Gene3D G3DSA:1.10.10.60 20 89 1.6E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14590 71bf2ee74835a960a37bab4a2e41cd3e 203 Pfam PF13592 Winged helix-turn helix 99 156 3.5E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS14590 71bf2ee74835a960a37bab4a2e41cd3e 203 SUPERFAMILY SSF46689 16 132 3.4E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14590 71bf2ee74835a960a37bab4a2e41cd3e 203 Pfam PF13551 Winged helix-turn helix 24 83 1.2E-13 T 23-04-2016 VV93_RS14590 71bf2ee74835a960a37bab4a2e41cd3e 203 Gene3D G3DSA:1.10.10.60 20 89 1.6E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS13635 71bf2ee74835a960a37bab4a2e41cd3e 203 Pfam PF13592 Winged helix-turn helix 99 156 3.5E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS13635 71bf2ee74835a960a37bab4a2e41cd3e 203 SUPERFAMILY SSF46689 16 132 3.4E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS13635 71bf2ee74835a960a37bab4a2e41cd3e 203 Pfam PF13551 Winged helix-turn helix 24 83 1.2E-13 T 23-04-2016 VV93_RS13635 71bf2ee74835a960a37bab4a2e41cd3e 203 Gene3D G3DSA:1.10.10.60 20 89 1.6E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14760 71bf2ee74835a960a37bab4a2e41cd3e 203 Pfam PF13592 Winged helix-turn helix 99 156 3.5E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS14760 71bf2ee74835a960a37bab4a2e41cd3e 203 SUPERFAMILY SSF46689 16 132 3.4E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14760 71bf2ee74835a960a37bab4a2e41cd3e 203 Pfam PF13551 Winged helix-turn helix 24 83 1.2E-13 T 23-04-2016 VV93_RS14760 71bf2ee74835a960a37bab4a2e41cd3e 203 Gene3D G3DSA:1.10.10.60 20 89 1.6E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14750 71bf2ee74835a960a37bab4a2e41cd3e 203 Pfam PF13592 Winged helix-turn helix 99 156 3.5E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS14750 71bf2ee74835a960a37bab4a2e41cd3e 203 SUPERFAMILY SSF46689 16 132 3.4E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14750 71bf2ee74835a960a37bab4a2e41cd3e 203 Pfam PF13551 Winged helix-turn helix 24 83 1.2E-13 T 23-04-2016 VV93_RS14750 71bf2ee74835a960a37bab4a2e41cd3e 203 Gene3D G3DSA:1.10.10.60 20 89 1.6E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS13655 71bf2ee74835a960a37bab4a2e41cd3e 203 Pfam PF13592 Winged helix-turn helix 99 156 3.5E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS13655 71bf2ee74835a960a37bab4a2e41cd3e 203 SUPERFAMILY SSF46689 16 132 3.4E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS13655 71bf2ee74835a960a37bab4a2e41cd3e 203 Pfam PF13551 Winged helix-turn helix 24 83 1.2E-13 T 23-04-2016 VV93_RS13655 71bf2ee74835a960a37bab4a2e41cd3e 203 Gene3D G3DSA:1.10.10.60 20 89 1.6E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14970 71bf2ee74835a960a37bab4a2e41cd3e 203 Pfam PF13592 Winged helix-turn helix 99 156 3.5E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS14970 71bf2ee74835a960a37bab4a2e41cd3e 203 SUPERFAMILY SSF46689 16 132 3.4E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14970 71bf2ee74835a960a37bab4a2e41cd3e 203 Pfam PF13551 Winged helix-turn helix 24 83 1.2E-13 T 23-04-2016 VV93_RS14970 71bf2ee74835a960a37bab4a2e41cd3e 203 Gene3D G3DSA:1.10.10.60 20 89 1.6E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS08000 18a9677a861c5351ed77f5a56f17bae6 248 Gene3D G3DSA:2.60.120.10 18 169 3.6E-41 T 23-04-2016 IPR014710 RmlC-like jelly roll fold VV93_RS08000 18a9677a861c5351ed77f5a56f17bae6 248 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 23-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VV93_RS08000 18a9677a861c5351ed77f5a56f17bae6 248 SMART SM00419 187 235 4.3E-15 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VV93_RS08000 18a9677a861c5351ed77f5a56f17bae6 248 SUPERFAMILY SSF51206 23 162 2.36E-31 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like VV93_RS08000 18a9677a861c5351ed77f5a56f17bae6 248 SUPERFAMILY SSF46785 165 244 2.93E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS08000 18a9677a861c5351ed77f5a56f17bae6 248 SMART SM00100 30 151 2.4E-20 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain VV93_RS08000 18a9677a861c5351ed77f5a56f17bae6 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.5E-11 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VV93_RS08000 18a9677a861c5351ed77f5a56f17bae6 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.5E-11 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VV93_RS08000 18a9677a861c5351ed77f5a56f17bae6 248 Gene3D G3DSA:1.10.10.10 170 244 4.1E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS08000 18a9677a861c5351ed77f5a56f17bae6 248 PANTHER PTHR24567:SF28 1 248 6.0E-133 T 23-04-2016 VV93_RS08000 18a9677a861c5351ed77f5a56f17bae6 248 PANTHER PTHR24567 1 248 6.0E-133 T 23-04-2016 VV93_RS08000 18a9677a861c5351ed77f5a56f17bae6 248 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 1.4E-17 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VV93_RS08000 18a9677a861c5351ed77f5a56f17bae6 248 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 6.2E-15 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain VV93_RS05775 d3243f72c635eeefddaf0eca0f16d103 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 69 8.3E-15 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VV93_RS05775 d3243f72c635eeefddaf0eca0f16d103 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 1.8E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS05775 d3243f72c635eeefddaf0eca0f16d103 300 PANTHER PTHR30465:SF9 17 300 2.8E-141 T 23-04-2016 VV93_RS05775 d3243f72c635eeefddaf0eca0f16d103 300 SUPERFAMILY SSF161098 97 281 8.63E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS05775 d3243f72c635eeefddaf0eca0f16d103 300 Gene3D G3DSA:1.10.3720.10 100 297 5.9E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS05775 d3243f72c635eeefddaf0eca0f16d103 300 PANTHER PTHR30465 17 300 2.8E-141 T 23-04-2016 VV93_RS03140 671319ff820140eec2995efba79e937f 296 PANTHER PTHR30293:SF2 2 296 6.5E-195 T 23-04-2016 VV93_RS03140 671319ff820140eec2995efba79e937f 296 Gene3D G3DSA:1.10.10.10 3 81 3.6E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS03140 671319ff820140eec2995efba79e937f 296 Gene3D G3DSA:3.40.190.10 197 254 4.1E-4 T 23-04-2016 VV93_RS03140 671319ff820140eec2995efba79e937f 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 4.9E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS03140 671319ff820140eec2995efba79e937f 296 SUPERFAMILY SSF46785 2 85 1.27E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS03140 671319ff820140eec2995efba79e937f 296 Pfam PF03466 LysR substrate binding domain 96 288 5.3E-12 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS03140 671319ff820140eec2995efba79e937f 296 SUPERFAMILY SSF53850 91 288 6.15E-24 T 23-04-2016 VV93_RS03140 671319ff820140eec2995efba79e937f 296 PANTHER PTHR30293 2 296 6.5E-195 T 23-04-2016 VV93_RS03140 671319ff820140eec2995efba79e937f 296 Gene3D G3DSA:3.40.190.10 96 196 1.8E-5 T 23-04-2016 VV93_RS15220 f7543cd3f12c408657867d72e0c5ae46 85 Pfam PF00137 ATP synthase subunit C 10 72 1.9E-10 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VV93_RS15220 f7543cd3f12c408657867d72e0c5ae46 85 PANTHER PTHR10031 8 77 5.5E-19 T 23-04-2016 VV93_RS15220 f7543cd3f12c408657867d72e0c5ae46 85 PRINTS PR00124 ATP synthase C subunit signature 32 47 2.3E-6 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VV93_RS15220 f7543cd3f12c408657867d72e0c5ae46 85 PRINTS PR00124 ATP synthase C subunit signature 49 74 2.3E-6 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VV93_RS15220 f7543cd3f12c408657867d72e0c5ae46 85 PRINTS PR00124 ATP synthase C subunit signature 11 30 2.3E-6 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VV93_RS15220 f7543cd3f12c408657867d72e0c5ae46 85 SUPERFAMILY SSF81333 3 78 3.53E-19 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VV93_RS15220 f7543cd3f12c408657867d72e0c5ae46 85 Gene3D G3DSA:1.20.20.10 2 78 4.3E-32 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VV93_RS15220 f7543cd3f12c408657867d72e0c5ae46 85 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 23-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site VV93_RS15220 f7543cd3f12c408657867d72e0c5ae46 85 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 76 14.056 T 23-04-2016 VV93_RS15220 f7543cd3f12c408657867d72e0c5ae46 85 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 3.0E-30 T 23-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VV93_RS05310 ce7864d3a65e3ae0599bfa8c499d75c9 440 PANTHER PTHR11236 43 433 5.5E-128 T 23-04-2016 VV93_RS05310 ce7864d3a65e3ae0599bfa8c499d75c9 440 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 90 429 9.7E-101 T 23-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VV93_RS05310 ce7864d3a65e3ae0599bfa8c499d75c9 440 Gene3D G3DSA:3.60.120.10 20 431 8.3E-90 T 23-04-2016 IPR005801 ADC synthase GO:0009058 VV93_RS05310 ce7864d3a65e3ae0599bfa8c499d75c9 440 Hamap MF_01935 Isochorismate synthase MenF [menF]. 9 432 37.592 T 23-04-2016 VV93_RS05310 ce7864d3a65e3ae0599bfa8c499d75c9 440 PANTHER PTHR11236:SF3 43 433 5.5E-128 T 23-04-2016 VV93_RS05310 ce7864d3a65e3ae0599bfa8c499d75c9 440 Pfam PF00425 chorismate binding enzyme 169 422 4.0E-71 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal VV93_RS05310 ce7864d3a65e3ae0599bfa8c499d75c9 440 SUPERFAMILY SSF56322 29 430 2.35E-103 T 23-04-2016 IPR005801 ADC synthase GO:0009058 VV93_RS09725 6db6fb591f0e2003c1eba2e8bc0710d3 488 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 132 144 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VV93_RS09725 6db6fb591f0e2003c1eba2e8bc0710d3 488 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 256 443 1.0E-27 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VV93_RS09725 6db6fb591f0e2003c1eba2e8bc0710d3 488 Hamap MF_00986 L-fuculokinase [fucK]. 1 470 61.892 T 23-04-2016 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51|UniPathway: UPA00563 VV93_RS09725 6db6fb591f0e2003c1eba2e8bc0710d3 488 Gene3D G3DSA:3.30.420.40 252 470 5.7E-35 T 23-04-2016 VV93_RS09725 6db6fb591f0e2003c1eba2e8bc0710d3 488 SUPERFAMILY SSF53067 252 469 8.95E-44 T 23-04-2016 VV93_RS09725 6db6fb591f0e2003c1eba2e8bc0710d3 488 SUPERFAMILY SSF53067 4 250 2.59E-58 T 23-04-2016 VV93_RS09725 6db6fb591f0e2003c1eba2e8bc0710d3 488 PANTHER PTHR10196:SF60 1 468 6.2E-192 T 23-04-2016 VV93_RS09725 6db6fb591f0e2003c1eba2e8bc0710d3 488 TIGRFAM TIGR02628 fuculo_kin_coli: L-fuculokinase 2 469 1.9E-265 T 23-04-2016 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51|UniPathway: UPA00563 VV93_RS09725 6db6fb591f0e2003c1eba2e8bc0710d3 488 PANTHER PTHR10196 1 468 6.2E-192 T 23-04-2016 VV93_RS09725 6db6fb591f0e2003c1eba2e8bc0710d3 488 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 247 1.4E-74 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VV93_RS09725 6db6fb591f0e2003c1eba2e8bc0710d3 488 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 357 377 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VV93_RS09725 6db6fb591f0e2003c1eba2e8bc0710d3 488 Gene3D G3DSA:3.30.420.40 1 248 4.8E-51 T 23-04-2016 VV93_RS09725 6db6fb591f0e2003c1eba2e8bc0710d3 488 PIRSF PIRSF000538 1 484 2.2E-83 T 23-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VV93_RS00345 06b1c2577a22ff551bd8b511073661df 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 5.2E-118 T 23-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VV93_RS00345 06b1c2577a22ff551bd8b511073661df 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV93_RS00345 06b1c2577a22ff551bd8b511073661df 279 PANTHER PTHR37426:SF1 2 279 5.9E-159 T 23-04-2016 VV93_RS00345 06b1c2577a22ff551bd8b511073661df 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 161 167 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV93_RS00345 06b1c2577a22ff551bd8b511073661df 279 SUPERFAMILY SSF53335 9 275 3.1E-96 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00345 06b1c2577a22ff551bd8b511073661df 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.399 T 23-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VV93_RS00345 06b1c2577a22ff551bd8b511073661df 279 Gene3D G3DSA:3.40.50.150 1 279 8.9E-116 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00345 06b1c2577a22ff551bd8b511073661df 279 PANTHER PTHR37426 2 279 5.9E-159 T 23-04-2016 VV93_RS01870 a7e1c65688b12c11eba96fb883cdc2dc 130 Gene3D G3DSA:3.30.1490.10 74 129 7.5E-28 T 23-04-2016 VV93_RS01870 a7e1c65688b12c11eba96fb883cdc2dc 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.189 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VV93_RS01870 a7e1c65688b12c11eba96fb883cdc2dc 130 PANTHER PTHR11758 1 130 6.9E-59 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VV93_RS01870 a7e1c65688b12c11eba96fb883cdc2dc 130 Pfam PF00410 Ribosomal protein S8 5 129 7.3E-47 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VV93_RS01870 a7e1c65688b12c11eba96fb883cdc2dc 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VV93_RS01870 a7e1c65688b12c11eba96fb883cdc2dc 130 SUPERFAMILY SSF56047 2 129 4.97E-44 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VV93_RS01870 a7e1c65688b12c11eba96fb883cdc2dc 130 Gene3D G3DSA:3.30.1370.30 2 71 1.7E-25 T 23-04-2016 VV93_RS06485 8b4a24e3727023f58ca18ca5b0d5509c 346 Gene3D G3DSA:3.90.1150.10 258 344 1.9E-10 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS06485 8b4a24e3727023f58ca18ca5b0d5509c 346 PANTHER PTHR11751:SF398 3 338 9.4E-95 T 23-04-2016 VV93_RS06485 8b4a24e3727023f58ca18ca5b0d5509c 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 53.32 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 VV93_RS06485 8b4a24e3727023f58ca18ca5b0d5509c 346 Pfam PF00155 Aminotransferase class I and II 44 337 1.1E-55 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV93_RS06485 8b4a24e3727023f58ca18ca5b0d5509c 346 Gene3D G3DSA:3.40.640.10 40 253 2.5E-73 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS06485 8b4a24e3727023f58ca18ca5b0d5509c 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 4.9E-118 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 VV93_RS06485 8b4a24e3727023f58ca18ca5b0d5509c 346 SUPERFAMILY SSF53383 12 343 6.88E-74 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS06485 8b4a24e3727023f58ca18ca5b0d5509c 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 VV93_RS06485 8b4a24e3727023f58ca18ca5b0d5509c 346 PANTHER PTHR11751 3 338 9.4E-95 T 23-04-2016 VV93_RS10535 f8281a4d0c622e7ff939b419ff957a4e 670 PANTHER PTHR32089 1 670 2.8E-242 T 23-04-2016 VV93_RS10535 f8281a4d0c622e7ff939b419ff957a4e 670 SMART SM00304 341 393 2.4E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS10535 f8281a4d0c622e7ff939b419ff957a4e 670 Pfam PF00672 HAMP domain 322 389 1.8E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS10535 f8281a4d0c622e7ff939b419ff957a4e 670 Gene3D G3DSA:1.10.287.950 423 638 1.0E-53 T 23-04-2016 VV93_RS10535 f8281a4d0c622e7ff939b419ff957a4e 670 PANTHER PTHR32089:SF58 1 670 2.8E-242 T 23-04-2016 VV93_RS10535 f8281a4d0c622e7ff939b419ff957a4e 670 Pfam PF12729 Four helix bundle sensory module for signal transduction 11 160 8.5E-7 T 23-04-2016 IPR024478 4HB MCP domain VV93_RS10535 f8281a4d0c622e7ff939b419ff957a4e 670 SUPERFAMILY SSF58104 361 670 7.98E-72 T 23-04-2016 VV93_RS10535 f8281a4d0c622e7ff939b419ff957a4e 670 SMART SM00283 408 669 3.0E-74 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS10535 f8281a4d0c622e7ff939b419ff957a4e 670 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 471 668 1.3E-51 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 639 1.9E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 PANTHER PTHR24423:SF497 317 368 2.1E-50 T 23-04-2016 VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 Pfam PF00027 Cyclic nucleotide-binding domain 202 289 1.8E-14 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 PANTHER PTHR24423:SF497 456 642 2.1E-50 T 23-04-2016 VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 SUPERFAMILY SSF52172 3 130 2.39E-8 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 Gene3D G3DSA:3.40.50.2300 3 129 3.3E-7 T 23-04-2016 VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 PANTHER PTHR24423:SF497 3 12 2.1E-50 T 23-04-2016 VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 SUPERFAMILY SSF51206 201 311 9.3E-19 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 SMART SM00387 528 641 3.0E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 Gene3D G3DSA:1.10.287.130 335 380 1.1E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 Gene3D G3DSA:2.60.120.10 202 311 3.0E-16 T 23-04-2016 IPR014710 RmlC-like jelly roll fold VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 7.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 597 7.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 7.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 7.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 366 1.2E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 PANTHER PTHR24423 456 642 2.1E-50 T 23-04-2016 VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 PANTHER PTHR24423 317 368 2.1E-50 T 23-04-2016 VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 SUPERFAMILY SSF55874 482 641 5.5E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 PANTHER PTHR24423 3 12 2.1E-50 T 23-04-2016 VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 Gene3D G3DSA:3.30.565.10 489 641 1.0E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS06965 fb1c11cefe95534944a11391be6b40f8 647 SUPERFAMILY SSF47384 335 371 1.55E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS11085 98400b65ad2e52d138180c0ff491342d 377 Pfam PF07196 Flagellin hook IN motif 195 249 2.2E-9 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VV93_RS11085 98400b65ad2e52d138180c0ff491342d 377 SUPERFAMILY SSF64518 1 376 1.44E-97 T 23-04-2016 VV93_RS11085 98400b65ad2e52d138180c0ff491342d 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV93_RS11085 98400b65ad2e52d138180c0ff491342d 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV93_RS11085 98400b65ad2e52d138180c0ff491342d 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV93_RS11085 98400b65ad2e52d138180c0ff491342d 377 PANTHER PTHR30244:SF1 2 376 4.0E-165 T 23-04-2016 VV93_RS11085 98400b65ad2e52d138180c0ff491342d 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.6E-42 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS11085 98400b65ad2e52d138180c0ff491342d 377 PANTHER PTHR30244 2 376 4.0E-165 T 23-04-2016 VV93_RS11085 98400b65ad2e52d138180c0ff491342d 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.4E-25 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS11085 98400b65ad2e52d138180c0ff491342d 377 Gene3D G3DSA:1.20.1330.10 55 171 1.2E-60 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS11085 98400b65ad2e52d138180c0ff491342d 377 Gene3D G3DSA:1.20.1330.10 279 332 1.2E-60 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS03490 3bc839da7098cf3f7a86e5d97a6a4d45 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 11 257 4.9E-113 T 23-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 VV93_RS03490 3bc839da7098cf3f7a86e5d97a6a4d45 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 2.5E-90 T 23-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 VV93_RS03490 3bc839da7098cf3f7a86e5d97a6a4d45 437 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 23-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 VV93_RS03490 3bc839da7098cf3f7a86e5d97a6a4d45 437 PANTHER PTHR21631 4 437 6.7E-170 T 23-04-2016 VV93_RS03490 3bc839da7098cf3f7a86e5d97a6a4d45 437 PIRSF PIRSF001362 1 437 7.8E-224 T 23-04-2016 VV93_RS03490 3bc839da7098cf3f7a86e5d97a6a4d45 437 SUPERFAMILY SSF51621 6 436 1.3E-152 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS03490 3bc839da7098cf3f7a86e5d97a6a4d45 437 Gene3D G3DSA:3.20.20.60 8 419 9.7E-168 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS03490 3bc839da7098cf3f7a86e5d97a6a4d45 437 Pfam PF00463 Isocitrate lyase family 15 257 3.7E-62 T 23-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 VV93_RS03490 3bc839da7098cf3f7a86e5d97a6a4d45 437 Pfam PF00463 Isocitrate lyase family 259 436 5.6E-53 T 23-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 VV93_RS07510 5a77adfb92ac7406deb37f842028e6f3 500 PANTHER PTHR34217:SF1 8 500 2.6E-248 T 23-04-2016 VV93_RS07510 5a77adfb92ac7406deb37f842028e6f3 500 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 16 499 6.7E-98 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VV93_RS07510 5a77adfb92ac7406deb37f842028e6f3 500 SUPERFAMILY SSF55486 10 500 4.64E-120 T 23-04-2016 VV93_RS07510 5a77adfb92ac7406deb37f842028e6f3 500 PIRSF PIRSF006615 9 500 6.6E-202 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VV93_RS07510 5a77adfb92ac7406deb37f842028e6f3 500 PANTHER PTHR34217 8 500 2.6E-248 T 23-04-2016 VV93_RS07510 5a77adfb92ac7406deb37f842028e6f3 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 451 469 5.3E-44 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VV93_RS07510 5a77adfb92ac7406deb37f842028e6f3 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 298 314 5.3E-44 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VV93_RS07510 5a77adfb92ac7406deb37f842028e6f3 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 251 270 5.3E-44 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VV93_RS07510 5a77adfb92ac7406deb37f842028e6f3 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 407 428 5.3E-44 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VV93_RS07510 5a77adfb92ac7406deb37f842028e6f3 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 337 356 5.3E-44 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VV93_RS07510 5a77adfb92ac7406deb37f842028e6f3 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 271 290 5.3E-44 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VV93_RS07510 5a77adfb92ac7406deb37f842028e6f3 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 155 175 5.3E-44 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VV93_RS12485 c5ba7ea63f83d27aa50d7c8507693898 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 1.1E-113 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VV93_RS12485 c5ba7ea63f83d27aa50d7c8507693898 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 1.5E-107 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VV93_RS12485 c5ba7ea63f83d27aa50d7c8507693898 264 PANTHER PTHR20881 1 262 4.2E-187 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VV93_RS12485 c5ba7ea63f83d27aa50d7c8507693898 264 PIRSF PIRSF000388 1 264 2.1E-100 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VV93_RS12485 c5ba7ea63f83d27aa50d7c8507693898 264 PANTHER PTHR20881:SF3 1 262 4.2E-187 T 23-04-2016 VV93_RS12485 c5ba7ea63f83d27aa50d7c8507693898 264 Gene3D G3DSA:3.20.20.60 1 262 6.4E-110 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS12485 c5ba7ea63f83d27aa50d7c8507693898 264 SUPERFAMILY SSF51621 3 262 1.02E-104 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS12485 c5ba7ea63f83d27aa50d7c8507693898 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.058 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VV93_RS04590 982f589fee58374ffa26f77c1b2896f3 262 SUPERFAMILY SSF117143 93 223 5.75E-33 T 23-04-2016 VV93_RS04590 982f589fee58374ffa26f77c1b2896f3 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 4.3E-24 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VV93_RS04590 982f589fee58374ffa26f77c1b2896f3 262 PANTHER PTHR30435 1 262 5.5E-133 T 23-04-2016 VV93_RS04590 982f589fee58374ffa26f77c1b2896f3 262 Pfam PF00460 Flagella basal body rod protein 5 35 6.8E-11 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VV93_RS04590 982f589fee58374ffa26f77c1b2896f3 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 1.7E-115 T 23-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 VV93_RS04590 982f589fee58374ffa26f77c1b2896f3 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 1.1E-30 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VV93_RS04590 982f589fee58374ffa26f77c1b2896f3 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 3.7E-38 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VV93_RS04590 982f589fee58374ffa26f77c1b2896f3 262 PANTHER PTHR30435:SF19 1 262 5.5E-133 T 23-04-2016 VV93_RS04590 982f589fee58374ffa26f77c1b2896f3 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VV93_RS14380 dd30c02467fd081d9af975b314c2cc2f 252 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 3.7E-34 T 23-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VV93_RS14380 dd30c02467fd081d9af975b314c2cc2f 252 PANTHER PTHR11921 3 229 6.1E-102 T 23-04-2016 VV93_RS14380 dd30c02467fd081d9af975b314c2cc2f 252 SUPERFAMILY SSF46548 107 226 1.08E-30 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VV93_RS14380 dd30c02467fd081d9af975b314c2cc2f 252 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VV93_RS14380 dd30c02467fd081d9af975b314c2cc2f 252 Pfam PF13183 4Fe-4S dicluster domain 147 219 6.8E-11 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV93_RS14380 dd30c02467fd081d9af975b314c2cc2f 252 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV93_RS14380 dd30c02467fd081d9af975b314c2cc2f 252 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 5.4E-94 T 23-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VV93_RS14380 dd30c02467fd081d9af975b314c2cc2f 252 SUPERFAMILY SSF54292 5 106 1.84E-29 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VV93_RS14380 dd30c02467fd081d9af975b314c2cc2f 252 Gene3D G3DSA:1.10.1060.10 107 230 1.4E-35 T 23-04-2016 VV93_RS14380 dd30c02467fd081d9af975b314c2cc2f 252 Gene3D G3DSA:3.10.20.30 3 106 9.2E-35 T 23-04-2016 IPR012675 Beta-grasp domain VV93_RS11940 6012b769a9c334f56dce5af4631d8cb5 346 SUPERFAMILY SSF48452 55 325 5.12E-30 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS11940 6012b769a9c334f56dce5af4631d8cb5 346 SMART SM00028 121 154 1.7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS11940 6012b769a9c334f56dce5af4631d8cb5 346 SMART SM00028 216 249 4.3E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS11940 6012b769a9c334f56dce5af4631d8cb5 346 SMART SM00028 182 215 0.05 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS11940 6012b769a9c334f56dce5af4631d8cb5 346 SMART SM00028 87 120 6.1E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS11940 6012b769a9c334f56dce5af4631d8cb5 346 SMART SM00028 280 313 1.6E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS11940 6012b769a9c334f56dce5af4631d8cb5 346 Pfam PF07719 Tetratricopeptide repeat 219 249 9.3E-8 T 23-04-2016 IPR013105 Tetratricopeptide repeat 2 VV93_RS11940 6012b769a9c334f56dce5af4631d8cb5 346 PANTHER PTHR23083 177 315 2.8E-38 T 23-04-2016 VV93_RS11940 6012b769a9c334f56dce5af4631d8cb5 346 PANTHER PTHR23083 57 149 2.8E-38 T 23-04-2016 VV93_RS11940 6012b769a9c334f56dce5af4631d8cb5 346 Pfam PF13181 Tetratricopeptide repeat 281 308 0.016 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS11940 6012b769a9c334f56dce5af4631d8cb5 346 Pfam PF13432 Tetratricopeptide repeat 180 214 0.017 T 23-04-2016 VV93_RS11940 6012b769a9c334f56dce5af4631d8cb5 346 Pfam PF13432 Tetratricopeptide repeat 91 148 4.9E-6 T 23-04-2016 VV93_RS11940 6012b769a9c334f56dce5af4631d8cb5 346 Gene3D G3DSA:1.25.40.10 54 327 9.7E-44 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS01100 f6d8666eee78817e4fafc6ea1f77e75a 163 PIRSF PIRSF006291 2 162 2.0E-40 T 23-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 VV93_RS01100 f6d8666eee78817e4fafc6ea1f77e75a 163 SUPERFAMILY SSF103054 85 162 5.23E-24 T 23-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain VV93_RS01100 f6d8666eee78817e4fafc6ea1f77e75a 163 Pfam PF04612 Type II secretion system (T2SS), protein M 7 162 3.2E-55 T 23-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 VV93_RS01100 f6d8666eee78817e4fafc6ea1f77e75a 163 Gene3D G3DSA:3.30.1360.100 85 163 3.4E-33 T 23-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain VV93_RS04480 d5c133ce735174792dc50e55b0a1cbb7 286 PANTHER PTHR40590 1 286 7.8E-74 T 23-04-2016 VV93_RS04480 d5c133ce735174792dc50e55b0a1cbb7 286 Pfam PF01963 TraB family 23 275 4.5E-61 T 23-04-2016 IPR002816 Pheromone shutdown, TraB VV93_RS09985 aa4539c9598cd538be695c696fad6382 565 PANTHER PTHR30349:SF20 317 557 1.3E-20 T 23-04-2016 VV93_RS09985 aa4539c9598cd538be695c696fad6382 565 PANTHER PTHR30349:SF20 260 290 1.3E-20 T 23-04-2016 VV93_RS09985 aa4539c9598cd538be695c696fad6382 565 SUPERFAMILY SSF56349 316 554 1.44E-38 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS09985 aa4539c9598cd538be695c696fad6382 565 SUPERFAMILY SSF56349 232 288 1.44E-38 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS09985 aa4539c9598cd538be695c696fad6382 565 PANTHER PTHR30349 317 557 1.3E-20 T 23-04-2016 VV93_RS09985 aa4539c9598cd538be695c696fad6382 565 PANTHER PTHR30349 260 290 1.3E-20 T 23-04-2016 VV93_RS09985 aa4539c9598cd538be695c696fad6382 565 Pfam PF00589 Phage integrase family 399 534 2.0E-8 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS09985 aa4539c9598cd538be695c696fad6382 565 Gene3D G3DSA:1.10.150.130 231 355 8.2E-9 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal VV93_RS09985 aa4539c9598cd538be695c696fad6382 565 Gene3D G3DSA:1.10.443.10 368 554 1.7E-17 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS06535 a2ecafaf44bbe87d635d331a227111cd 460 PANTHER PTHR10890 1 459 1.5E-256 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VV93_RS06535 a2ecafaf44bbe87d635d331a227111cd 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VV93_RS06535 a2ecafaf44bbe87d635d331a227111cd 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VV93_RS06535 a2ecafaf44bbe87d635d331a227111cd 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VV93_RS06535 a2ecafaf44bbe87d635d331a227111cd 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VV93_RS06535 a2ecafaf44bbe87d635d331a227111cd 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.297 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 VV93_RS06535 a2ecafaf44bbe87d635d331a227111cd 460 SUPERFAMILY SSF52374 1 313 1.61E-104 T 23-04-2016 VV93_RS06535 a2ecafaf44bbe87d635d331a227111cd 460 SMART SM00840 341 402 6.9E-28 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VV93_RS06535 a2ecafaf44bbe87d635d331a227111cd 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 7.4E-193 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 VV93_RS06535 a2ecafaf44bbe87d635d331a227111cd 460 Gene3D G3DSA:1.20.120.640 306 392 2.9E-28 T 23-04-2016 VV93_RS06535 a2ecafaf44bbe87d635d331a227111cd 460 Gene3D G3DSA:3.40.50.620 20 305 1.5E-113 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS06535 a2ecafaf44bbe87d635d331a227111cd 460 Pfam PF09190 DALR domain 341 402 6.9E-25 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VV93_RS06535 a2ecafaf44bbe87d635d331a227111cd 460 SUPERFAMILY SSF47323 316 459 3.27E-40 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS06535 a2ecafaf44bbe87d635d331a227111cd 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 2.2E-142 T 23-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 VV93_RS14600 cb962fcecd337369870c2eec928d65ee 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-33 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS14600 cb962fcecd337369870c2eec928d65ee 90 PANTHER PTHR33175:SF4 1 90 2.2E-54 T 23-04-2016 VV93_RS14600 cb962fcecd337369870c2eec928d65ee 90 PANTHER PTHR33175 1 90 2.2E-54 T 23-04-2016 VV93_RS14600 cb962fcecd337369870c2eec928d65ee 90 SMART SM00411 1 90 3.7E-46 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS14600 cb962fcecd337369870c2eec928d65ee 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.7E-19 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS14600 cb962fcecd337369870c2eec928d65ee 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.7E-19 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS14600 cb962fcecd337369870c2eec928d65ee 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.7E-19 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS14600 cb962fcecd337369870c2eec928d65ee 90 SUPERFAMILY SSF47729 1 90 2.06E-33 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VV93_RS14600 cb962fcecd337369870c2eec928d65ee 90 Gene3D G3DSA:4.10.520.10 1 90 4.7E-38 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VV93_RS14600 cb962fcecd337369870c2eec928d65ee 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VV93_RS01115 3f59f211bd5c51fc4e3483d577057c51 184 Pfam PF00293 NUDIX domain 47 155 5.4E-15 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VV93_RS01115 3f59f211bd5c51fc4e3483d577057c51 184 PANTHER PTHR11839:SF12 1 184 7.3E-96 T 23-04-2016 VV93_RS01115 3f59f211bd5c51fc4e3483d577057c51 184 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VV93_RS01115 3f59f211bd5c51fc4e3483d577057c51 184 SUPERFAMILY SSF55811 7 178 4.87E-38 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS01115 3f59f211bd5c51fc4e3483d577057c51 184 PANTHER PTHR11839 1 184 7.3E-96 T 23-04-2016 VV93_RS01115 3f59f211bd5c51fc4e3483d577057c51 184 Gene3D G3DSA:3.90.79.10 9 181 1.2E-41 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS01520 65e56c36b91b9235d6ff368d246e9288 354 SUPERFAMILY SSF51735 1 337 6.62E-94 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01520 65e56c36b91b9235d6ff368d246e9288 354 Gene3D G3DSA:3.90.25.10 192 338 9.1E-55 T 23-04-2016 VV93_RS01520 65e56c36b91b9235d6ff368d246e9288 354 PANTHER PTHR10366:SF41 2 353 5.9E-183 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 VV93_RS01520 65e56c36b91b9235d6ff368d246e9288 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 339 2.3E-159 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 VV93_RS01520 65e56c36b91b9235d6ff368d246e9288 354 PANTHER PTHR10366 2 353 5.9E-183 T 23-04-2016 VV93_RS01520 65e56c36b91b9235d6ff368d246e9288 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 4.0E-99 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01520 65e56c36b91b9235d6ff368d246e9288 354 Gene3D G3DSA:3.40.50.720 1 191 1.5E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS14495 4c21ad341e219e0c840ed66979cc4066 207 Pfam PF01914 MarC family integral membrane protein 3 204 6.4E-45 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VV93_RS14495 4c21ad341e219e0c840ed66979cc4066 207 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 202 4.8E-41 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VV93_RS14495 4c21ad341e219e0c840ed66979cc4066 207 PANTHER PTHR33508 1 206 2.6E-44 T 23-04-2016 VV93_RS14495 4c21ad341e219e0c840ed66979cc4066 207 PANTHER PTHR33508:SF1 1 206 2.6E-44 T 23-04-2016 VV93_RS10010 afda29c44c0f121846f37ecebda5c3a9 387 PANTHER PTHR30094:SF0 6 387 3.5E-124 T 23-04-2016 VV93_RS10010 afda29c44c0f121846f37ecebda5c3a9 387 SUPERFAMILY SSF56059 267 385 2.12E-87 T 23-04-2016 VV93_RS10010 afda29c44c0f121846f37ecebda5c3a9 387 SUPERFAMILY SSF56059 2 169 2.12E-87 T 23-04-2016 VV93_RS10010 afda29c44c0f121846f37ecebda5c3a9 387 PANTHER PTHR30094 6 387 3.5E-124 T 23-04-2016 VV93_RS10010 afda29c44c0f121846f37ecebda5c3a9 387 SUPERFAMILY SSF52440 174 280 3.16E-40 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS10010 afda29c44c0f121846f37ecebda5c3a9 387 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 1.2E-157 T 23-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain VV93_RS14860 9b5efc3fbd472c765cba68feab8aec3c 268 PANTHER PTHR11019 1 266 1.6E-98 T 23-04-2016 VV93_RS14860 9b5efc3fbd472c765cba68feab8aec3c 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 4.6E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV93_RS14860 9b5efc3fbd472c765cba68feab8aec3c 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 4.6E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV93_RS14860 9b5efc3fbd472c765cba68feab8aec3c 268 SUPERFAMILY SSF46689 174 218 2.11E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14860 9b5efc3fbd472c765cba68feab8aec3c 268 SUPERFAMILY SSF51215 27 143 1.31E-18 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VV93_RS14860 9b5efc3fbd472c765cba68feab8aec3c 268 Pfam PF02311 AraC-like ligand binding domain 18 144 2.8E-19 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VV93_RS14860 9b5efc3fbd472c765cba68feab8aec3c 268 Gene3D G3DSA:2.60.120.280 25 99 4.5E-12 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VV93_RS14860 9b5efc3fbd472c765cba68feab8aec3c 268 Gene3D G3DSA:1.10.10.60 172 222 7.3E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14860 9b5efc3fbd472c765cba68feab8aec3c 268 SMART SM00342 185 267 2.2E-28 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV93_RS14860 9b5efc3fbd472c765cba68feab8aec3c 268 PANTHER PTHR11019:SF94 1 266 1.6E-98 T 23-04-2016 VV93_RS14860 9b5efc3fbd472c765cba68feab8aec3c 268 Gene3D G3DSA:1.10.10.60 223 266 2.8E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14860 9b5efc3fbd472c765cba68feab8aec3c 268 SUPERFAMILY SSF46689 221 267 8.06E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14860 9b5efc3fbd472c765cba68feab8aec3c 268 Pfam PF12833 Helix-turn-helix domain 191 267 4.8E-24 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV93_RS09995 b93f76bd06690f1a91a8fde2bcfaab72 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 2.0E-69 T 23-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VV93_RS09995 b93f76bd06690f1a91a8fde2bcfaab72 149 Pfam PF06610 L-alanine exporter 8 142 5.1E-68 T 23-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VV93_RS09995 b93f76bd06690f1a91a8fde2bcfaab72 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 31.432 T 23-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VV93_RS07115 7cffd72ccab052ce46a739e31a761cd9 254 PANTHER PTHR24220 1 237 1.2E-78 T 23-04-2016 VV93_RS07115 7cffd72ccab052ce46a739e31a761cd9 254 SUPERFAMILY SSF52540 15 228 6.71E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07115 7cffd72ccab052ce46a739e31a761cd9 254 Pfam PF00005 ABC transporter 14 167 2.9E-20 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS07115 7cffd72ccab052ce46a739e31a761cd9 254 Gene3D G3DSA:3.40.50.300 15 234 7.8E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07115 7cffd72ccab052ce46a739e31a761cd9 254 SMART SM00382 21 216 1.7E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS07115 7cffd72ccab052ce46a739e31a761cd9 254 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 254 47.969 T 23-04-2016 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 VV93_RS07115 7cffd72ccab052ce46a739e31a761cd9 254 PANTHER PTHR24220:SF547 1 237 1.2E-78 T 23-04-2016 VV93_RS01270 11f44bc131c18a6bec572d0c9e2c9cbf 323 SUPERFAMILY SSF103481 46 147 6.67E-13 T 23-04-2016 VV93_RS01270 11f44bc131c18a6bec572d0c9e2c9cbf 323 PANTHER PTHR32322 2 293 6.7E-91 T 23-04-2016 VV93_RS01270 11f44bc131c18a6bec572d0c9e2c9cbf 323 PANTHER PTHR32322:SF12 2 293 6.7E-91 T 23-04-2016 VV93_RS01270 11f44bc131c18a6bec572d0c9e2c9cbf 323 Pfam PF00892 EamA-like transporter family 13 145 2.7E-23 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VV93_RS01270 11f44bc131c18a6bec572d0c9e2c9cbf 323 Pfam PF00892 EamA-like transporter family 160 292 1.5E-14 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VV93_RS03525 a8b9f02af9346bcd8fca485b02fec6eb 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 113 282 8.0E-57 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VV93_RS03525 a8b9f02af9346bcd8fca485b02fec6eb 315 Pfam PF07549 SecD/SecF GG Motif 35 60 8.5E-11 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VV93_RS03525 a8b9f02af9346bcd8fca485b02fec6eb 315 Pfam PF02355 Protein export membrane protein 111 292 1.6E-71 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VV93_RS03525 a8b9f02af9346bcd8fca485b02fec6eb 315 PANTHER PTHR30081 3 314 3.4E-94 T 23-04-2016 VV93_RS03525 a8b9f02af9346bcd8fca485b02fec6eb 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.9E-32 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VV93_RS03525 a8b9f02af9346bcd8fca485b02fec6eb 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.9E-32 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VV93_RS03525 a8b9f02af9346bcd8fca485b02fec6eb 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.9E-32 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VV93_RS03525 a8b9f02af9346bcd8fca485b02fec6eb 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.9E-32 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VV93_RS03525 a8b9f02af9346bcd8fca485b02fec6eb 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 29.213 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VV93_RS03525 a8b9f02af9346bcd8fca485b02fec6eb 315 SUPERFAMILY SSF82866 74 293 4.45E-41 T 23-04-2016 VV93_RS03525 a8b9f02af9346bcd8fca485b02fec6eb 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 1.3E-87 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VV93_RS03525 a8b9f02af9346bcd8fca485b02fec6eb 315 Gene3D G3DSA:1.20.1640.10 129 294 7.1E-27 T 23-04-2016 VV93_RS14205 04ae93e77955ac0ce323422e58cc7883 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.0E-155 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 VV93_RS14205 04ae93e77955ac0ce323422e58cc7883 429 SUPERFAMILY SSF52540 197 371 1.46E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14205 04ae93e77955ac0ce323422e58cc7883 429 PANTHER PTHR10229 1 427 5.4E-185 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 VV93_RS14205 04ae93e77955ac0ce323422e58cc7883 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 45.871 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 VV93_RS14205 04ae93e77955ac0ce323422e58cc7883 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.0E-30 T 23-04-2016 IPR025121 GTPase HflX, N-terminal VV93_RS14205 04ae93e77955ac0ce323422e58cc7883 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 8.3E-21 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS14205 04ae93e77955ac0ce323422e58cc7883 429 SUPERFAMILY SSF54980 365 428 3.88E-18 T 23-04-2016 IPR009022 Elongation factor G, III-V domain VV93_RS14205 04ae93e77955ac0ce323422e58cc7883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 4.6E-10 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS14205 04ae93e77955ac0ce323422e58cc7883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 4.6E-10 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS14205 04ae93e77955ac0ce323422e58cc7883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 4.6E-10 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS14205 04ae93e77955ac0ce323422e58cc7883 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.9E-28 T 23-04-2016 IPR032305 GTP-binding protein, middle domain VV93_RS14205 04ae93e77955ac0ce323422e58cc7883 429 PIRSF PIRSF006809 3 423 1.1E-151 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 VV93_RS14205 04ae93e77955ac0ce323422e58cc7883 429 Gene3D G3DSA:3.40.50.300 197 361 9.6E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14205 04ae93e77955ac0ce323422e58cc7883 429 PANTHER PTHR10229:SF0 1 427 5.4E-185 T 23-04-2016 VV93_RS00440 53dc64b050e1f907dedfda4d55638e89 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 23-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS00440 53dc64b050e1f907dedfda4d55638e89 276 SUPERFAMILY SSF54506 2 274 4.29E-53 T 23-04-2016 VV93_RS00440 53dc64b050e1f907dedfda4d55638e89 276 Pfam PF01678 Diaminopimelate epimerase 5 124 1.8E-32 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS00440 53dc64b050e1f907dedfda4d55638e89 276 Pfam PF01678 Diaminopimelate epimerase 154 269 1.8E-32 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS00440 53dc64b050e1f907dedfda4d55638e89 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 1.0E-101 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS00440 53dc64b050e1f907dedfda4d55638e89 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.743 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS00440 53dc64b050e1f907dedfda4d55638e89 276 PANTHER PTHR31689:SF0 1 275 1.5E-142 T 23-04-2016 VV93_RS00440 53dc64b050e1f907dedfda4d55638e89 276 Gene3D G3DSA:3.10.310.10 4 122 3.3E-50 T 23-04-2016 VV93_RS00440 53dc64b050e1f907dedfda4d55638e89 276 PANTHER PTHR31689 1 275 1.5E-142 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS00440 53dc64b050e1f907dedfda4d55638e89 276 Gene3D G3DSA:3.10.310.10 123 264 2.2E-52 T 23-04-2016 VV93_RS00695 fdb562cd1db2ddd285bd040f54ee2e05 226 SUPERFAMILY SSF81324 126 218 7.59E-18 T 23-04-2016 VV93_RS00695 fdb562cd1db2ddd285bd040f54ee2e05 226 Gene3D G3DSA:1.10.287.70 123 216 2.0E-18 T 23-04-2016 VV93_RS00695 fdb562cd1db2ddd285bd040f54ee2e05 226 Pfam PF07885 Ion channel 133 217 6.8E-17 T 23-04-2016 IPR013099 Potassium channel domain VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 Pfam PF01751 Toprim domain 420 532 8.3E-19 T 23-04-2016 IPR006171 Toprim domain VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 Pfam PF00204 DNA gyrase B 221 391 5.0E-61 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 Gene3D G3DSA:3.40.50.670 719 787 1.5E-101 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 Gene3D G3DSA:3.40.50.670 405 551 1.5E-101 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 SMART SM00433 35 798 2.9E-273 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 SUPERFAMILY SSF56719 395 561 7.32E-88 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 SUPERFAMILY SSF56719 731 796 7.32E-88 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 SUPERFAMILY SSF55874 4 213 3.8E-75 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 Gene3D G3DSA:3.30.565.10 15 214 1.5E-92 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 7.5E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 7.5E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 7.5E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 7.5E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 7.5E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 7.5E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 7.5E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 7.5E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 7.5E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 8.1E-86 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 8.1E-86 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 8.1E-86 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 8.1E-86 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 8.1E-86 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 8.1E-86 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 8.1E-86 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 8.1E-86 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 8.1E-86 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 8.1E-86 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 8.1E-86 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 3.5E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 SMART SM00387 31 175 1.2E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 Gene3D G3DSA:3.30.230.10 220 393 9.6E-78 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 108.816 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 SUPERFAMILY SSF54211 221 393 4.93E-59 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PANTHER PTHR10169 725 805 0.0 T 23-04-2016 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 PANTHER PTHR10169 1 554 0.0 T 23-04-2016 VV93_RS00020 52a5e980a6da878d239f4e1fb54a3124 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 734 794 4.6E-30 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS07810 f38363ffaecd469c72278b49d7511727 66 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 57 2.2E-11 T 23-04-2016 IPR008554 Glutaredoxin-like VV93_RS07810 f38363ffaecd469c72278b49d7511727 66 PANTHER PTHR34386 1 64 2.5E-18 T 23-04-2016 VV93_RS07810 f38363ffaecd469c72278b49d7511727 66 Gene3D G3DSA:3.40.30.10 2 64 1.3E-18 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS07810 f38363ffaecd469c72278b49d7511727 66 PANTHER PTHR34386:SF2 1 64 2.5E-18 T 23-04-2016 VV93_RS07810 f38363ffaecd469c72278b49d7511727 66 SUPERFAMILY SSF52833 3 60 1.64E-6 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS12095 b68c07a7fcba3eaf00811e4dc83d9a98 442 SUPERFAMILY SSF52418 73 334 2.75E-89 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VV93_RS12095 b68c07a7fcba3eaf00811e4dc83d9a98 442 Gene3D G3DSA:1.20.970.10 2 67 2.2E-29 T 23-04-2016 VV93_RS12095 b68c07a7fcba3eaf00811e4dc83d9a98 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 8.6E-24 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VV93_RS12095 b68c07a7fcba3eaf00811e4dc83d9a98 442 Gene3D G3DSA:3.90.1170.30 339 431 2.9E-33 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VV93_RS12095 b68c07a7fcba3eaf00811e4dc83d9a98 442 SUPERFAMILY SSF47648 2 70 4.32E-21 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VV93_RS12095 b68c07a7fcba3eaf00811e4dc83d9a98 442 PANTHER PTHR10515 5 441 1.4E-214 T 23-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 VV93_RS12095 b68c07a7fcba3eaf00811e4dc83d9a98 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 1 438 50.606 T 23-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 VV93_RS12095 b68c07a7fcba3eaf00811e4dc83d9a98 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 3.4E-159 T 23-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 VV93_RS12095 b68c07a7fcba3eaf00811e4dc83d9a98 442 PIRSF PIRSF000478 1 439 7.4E-149 T 23-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 VV93_RS12095 b68c07a7fcba3eaf00811e4dc83d9a98 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 8.7E-49 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VV93_RS12095 b68c07a7fcba3eaf00811e4dc83d9a98 442 SUPERFAMILY SSF54680 337 437 8.89E-29 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VV93_RS12095 b68c07a7fcba3eaf00811e4dc83d9a98 442 Gene3D G3DSA:3.40.1030.10 76 338 4.1E-109 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VV93_RS12095 b68c07a7fcba3eaf00811e4dc83d9a98 442 SMART SM00941 350 424 2.8E-28 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VV93_RS12095 b68c07a7fcba3eaf00811e4dc83d9a98 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 4.8E-213 T 23-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 VV93_RS12095 b68c07a7fcba3eaf00811e4dc83d9a98 442 PANTHER PTHR10515:SF0 5 441 1.4E-214 T 23-04-2016 VV93_RS12095 b68c07a7fcba3eaf00811e4dc83d9a98 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 23-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 VV93_RS12095 b68c07a7fcba3eaf00811e4dc83d9a98 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 1.4E-20 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VV93_RS12435 dfda703a9e4bfdb431e52a6070e77055 378 Gene3D G3DSA:3.90.1510.10 42 275 1.6E-100 T 23-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 VV93_RS12435 dfda703a9e4bfdb431e52a6070e77055 378 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 373 4.3E-162 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VV93_RS12435 dfda703a9e4bfdb431e52a6070e77055 378 PIRSF PIRSF006078 1 377 5.8E-140 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VV93_RS12435 dfda703a9e4bfdb431e52a6070e77055 378 Pfam PF02595 Glycerate kinase family 3 372 1.7E-150 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VV93_RS12435 dfda703a9e4bfdb431e52a6070e77055 378 SUPERFAMILY SSF110738 1 375 1.7E-144 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VV93_RS12435 dfda703a9e4bfdb431e52a6070e77055 378 PANTHER PTHR21599:SF4 1 378 7.8E-220 T 23-04-2016 VV93_RS12435 dfda703a9e4bfdb431e52a6070e77055 378 PANTHER PTHR21599 1 378 7.8E-220 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VV93_RS17710 0e10409de6e662fcf5bc2e913f29ca24 181 PANTHER PTHR10169 1 181 1.3E-137 T 23-04-2016 VV93_RS17710 0e10409de6e662fcf5bc2e913f29ca24 181 PANTHER PTHR10169:SF30 1 181 1.3E-137 T 23-04-2016 VV93_RS17710 0e10409de6e662fcf5bc2e913f29ca24 181 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 5 180 8.7E-71 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS17710 0e10409de6e662fcf5bc2e913f29ca24 181 SMART SM00434 1 181 8.5E-13 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV93_RS17710 0e10409de6e662fcf5bc2e913f29ca24 181 SUPERFAMILY SSF56719 5 176 4.84E-75 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VV93_RS17710 0e10409de6e662fcf5bc2e913f29ca24 181 Gene3D G3DSA:3.90.199.10 4 180 6.0E-76 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 VV93_RS02940 170a57c5d66e256632b7fef1ed92eed8 1512 SUPERFAMILY SSF51395 461 1220 3.66E-270 T 23-04-2016 VV93_RS02940 170a57c5d66e256632b7fef1ed92eed8 1512 Gene3D G3DSA:3.60.20.10 21 454 1.3E-182 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VV93_RS02940 170a57c5d66e256632b7fef1ed92eed8 1512 Gene3D G3DSA:2.160.20.60 1241 1508 4.1E-107 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VV93_RS02940 170a57c5d66e256632b7fef1ed92eed8 1512 SUPERFAMILY SSF69336 1235 1498 4.05E-95 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VV93_RS02940 170a57c5d66e256632b7fef1ed92eed8 1512 PANTHER PTHR11938:SF1 10 1502 0.0 T 23-04-2016 VV93_RS02940 170a57c5d66e256632b7fef1ed92eed8 1512 Pfam PF04898 Glutamate synthase central domain 472 756 2.2E-115 T 23-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 VV93_RS02940 170a57c5d66e256632b7fef1ed92eed8 1512 Gene3D G3DSA:3.20.20.70 455 806 2.1E-108 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS02940 170a57c5d66e256632b7fef1ed92eed8 1512 SUPERFAMILY SSF56235 21 446 1.26E-151 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VV93_RS02940 170a57c5d66e256632b7fef1ed92eed8 1512 Pfam PF01493 GXGXG motif 1267 1452 5.3E-84 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VV93_RS02940 170a57c5d66e256632b7fef1ed92eed8 1512 Gene3D G3DSA:3.20.20.70 834 1220 1.5E-180 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS02940 170a57c5d66e256632b7fef1ed92eed8 1512 PANTHER PTHR11938 10 1502 0.0 T 23-04-2016 VV93_RS02940 170a57c5d66e256632b7fef1ed92eed8 1512 Pfam PF01645 Conserved region in glutamate synthase 817 1187 9.7E-152 T 23-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VV93_RS02940 170a57c5d66e256632b7fef1ed92eed8 1512 Pfam PF00310 Glutamine amidotransferases class-II 21 443 5.7E-186 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain VV93_RS13800 415abf7a33e710dd9d49b3dd0d65b19e 363 Gene3D G3DSA:1.20.1090.10 173 357 2.4E-68 T 23-04-2016 VV93_RS13800 415abf7a33e710dd9d49b3dd0d65b19e 363 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 358 43.711 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VV93_RS13800 415abf7a33e710dd9d49b3dd0d65b19e 363 Gene3D G3DSA:3.40.50.1970 2 172 5.6E-67 T 23-04-2016 VV93_RS13800 415abf7a33e710dd9d49b3dd0d65b19e 363 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 355 3.9E-122 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VV93_RS13800 415abf7a33e710dd9d49b3dd0d65b19e 363 Pfam PF01761 3-dehydroquinate synthase 68 325 2.1E-111 T 23-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VV93_RS13800 415abf7a33e710dd9d49b3dd0d65b19e 363 PANTHER PTHR21090 1 360 9.3E-205 T 23-04-2016 VV93_RS13800 415abf7a33e710dd9d49b3dd0d65b19e 363 PIRSF PIRSF001455 4 361 4.0E-108 T 23-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VV93_RS13800 415abf7a33e710dd9d49b3dd0d65b19e 363 SUPERFAMILY SSF56796 4 357 3.53E-119 T 23-04-2016 VV93_RS06650 4b31f2f6892d0a6b6d840e29bd4adad3 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 2.0E-14 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV93_RS06650 4b31f2f6892d0a6b6d840e29bd4adad3 331 Pfam PF00005 ABC transporter 24 187 2.1E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS06650 4b31f2f6892d0a6b6d840e29bd4adad3 331 PANTHER PTHR24220 5 328 2.2E-200 T 23-04-2016 VV93_RS06650 4b31f2f6892d0a6b6d840e29bd4adad3 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 7.3E-19 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV93_RS06650 4b31f2f6892d0a6b6d840e29bd4adad3 331 SMART SM00382 32 253 4.4E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS06650 4b31f2f6892d0a6b6d840e29bd4adad3 331 PANTHER PTHR24220:SF514 5 328 2.2E-200 T 23-04-2016 VV93_RS06650 4b31f2f6892d0a6b6d840e29bd4adad3 331 Gene3D G3DSA:3.40.50.300 2 260 6.1E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06650 4b31f2f6892d0a6b6d840e29bd4adad3 331 SUPERFAMILY SSF52540 4 269 8.46E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 PANTHER PTHR11070 801 1184 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 PANTHER PTHR11070 516 781 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 PANTHER PTHR11070 121 218 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 PANTHER PTHR11070 7 92 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 PANTHER PTHR11070 301 489 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 11 1188 0.0 T 23-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 Gene3D G3DSA:1.10.3170.10 158 349 3.6E-60 T 23-04-2016 VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 Pfam PF00580 UvrD/REP helicase N-terminal domain 16 437 5.1E-60 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 Gene3D G3DSA:3.40.50.300 451 584 4.8E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 Gene3D G3DSA:3.40.50.300 736 884 4.8E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 PANTHER PTHR11070:SF23 801 1184 0.0 T 23-04-2016 VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 PANTHER PTHR11070:SF23 516 781 0.0 T 23-04-2016 VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 PANTHER PTHR11070:SF23 121 218 0.0 T 23-04-2016 VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 PANTHER PTHR11070:SF23 7 92 0.0 T 23-04-2016 VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 PANTHER PTHR11070:SF23 301 489 0.0 T 23-04-2016 VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 SUPERFAMILY SSF52980 909 1190 5.9E-84 T 23-04-2016 IPR011335 Restriction endonuclease type II-like VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 Gene3D G3DSA:3.90.320.10 898 1190 6.8E-98 T 23-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 Pfam PF13361 UvrD-like helicase C-terminal domain 442 816 1.0E-19 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 Gene3D G3DSA:3.40.50.300 123 152 1.7E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 Gene3D G3DSA:3.40.50.300 11 85 1.7E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 Gene3D G3DSA:3.40.50.300 351 450 1.7E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 Gene3D G3DSA:1.10.486.10 587 735 1.3E-52 T 23-04-2016 VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 7 1189 15.152 T 23-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 SUPERFAMILY SSF52540 121 205 2.42E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 SUPERFAMILY SSF52540 802 848 2.42E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 SUPERFAMILY SSF52540 326 772 2.42E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 SUPERFAMILY SSF52540 16 83 2.42E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11750 4ee619a912986d52de05c33f70876dd0 1206 Pfam PF12705 PD-(D/E)XK nuclease superfamily 964 1161 4.0E-8 T 23-04-2016 VV93_RS01365 3fa22cfb714694a002642c1473cfc6e1 1037 Pfam PF08751 TrwC relaxase 10 284 4.0E-87 T 23-04-2016 IPR014862 TrwC relaxase VV93_RS01365 3fa22cfb714694a002642c1473cfc6e1 1037 Pfam PF13604 AAA domain 445 695 6.7E-43 T 23-04-2016 VV93_RS01365 3fa22cfb714694a002642c1473cfc6e1 1037 SUPERFAMILY SSF55464 1 285 2.06E-82 T 23-04-2016 VV93_RS01365 3fa22cfb714694a002642c1473cfc6e1 1037 Pfam PF13538 UvrD-like helicase C-terminal domain 916 963 2.5E-8 T 23-04-2016 IPR027785 UvrD-like helicase C-terminal domain VV93_RS01365 3fa22cfb714694a002642c1473cfc6e1 1037 SUPERFAMILY SSF52540 574 657 1.2E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01365 3fa22cfb714694a002642c1473cfc6e1 1037 SUPERFAMILY SSF52540 440 517 1.2E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01365 3fa22cfb714694a002642c1473cfc6e1 1037 Gene3D G3DSA:3.40.50.300 642 761 5.5E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01365 3fa22cfb714694a002642c1473cfc6e1 1037 Gene3D G3DSA:3.40.50.300 905 968 5.5E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01365 3fa22cfb714694a002642c1473cfc6e1 1037 SUPERFAMILY SSF52540 734 766 5.58E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01365 3fa22cfb714694a002642c1473cfc6e1 1037 SUPERFAMILY SSF52540 852 970 5.58E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01365 3fa22cfb714694a002642c1473cfc6e1 1037 SUPERFAMILY SSF52540 617 683 5.58E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01365 3fa22cfb714694a002642c1473cfc6e1 1037 Gene3D G3DSA:3.40.50.300 574 641 2.5E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01365 3fa22cfb714694a002642c1473cfc6e1 1037 Gene3D G3DSA:3.40.50.300 440 536 2.5E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01365 3fa22cfb714694a002642c1473cfc6e1 1037 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 13 284 2.7E-86 T 23-04-2016 IPR014059 Conjugative relaxase, N-terminal VV93_RS02855 c1826fcdbf939b92cffd13fb32b7f079 152 Pfam PF05258 Protein of unknown function (DUF721) 11 90 1.2E-10 T 23-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 VV93_RS14420 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 SUPERFAMILY SSF48592 3 230 1.02E-67 T 23-04-2016 VV93_RS14420 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Gene3D G3DSA:3.50.7.10 189 368 9.7E-100 T 23-04-2016 IPR027409 GroEL-like apical domain VV93_RS14420 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 SUPERFAMILY SSF48592 373 525 2.44E-31 T 23-04-2016 VV93_RS14420 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 5.3E-96 T 23-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 VV93_RS14420 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Gene3D G3DSA:1.10.560.10 3 188 1.9E-52 T 23-04-2016 IPR027413 GroEL-like equatorial domain VV93_RS14420 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 SUPERFAMILY SSF52029 185 376 4.49E-84 T 23-04-2016 IPR027409 GroEL-like apical domain VV93_RS14420 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 2.8E-254 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VV93_RS14420 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Gene3D G3DSA:1.10.560.10 369 518 1.5E-39 T 23-04-2016 IPR027413 GroEL-like equatorial domain VV93_RS14420 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PANTHER PTHR11353 2 546 6.4E-253 T 23-04-2016 VV93_RS14420 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 41.501 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VV93_RS14420 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 268 291 1.6E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VV93_RS14420 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 350 375 1.6E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VV93_RS14420 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 27 53 1.6E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VV93_RS14420 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 398 419 1.6E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VV93_RS14420 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 83 110 1.6E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VV93_RS14420 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 23-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 SUPERFAMILY SSF52540 429 568 3.0E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 SUPERFAMILY SSF52540 4 204 3.0E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 Gene3D G3DSA:3.30.1490.20 130 153 1.3E-27 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 Gene3D G3DSA:3.30.1490.20 200 247 1.3E-27 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.871 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 SUPERFAMILY SSF52540 620 912 2.72E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 Gene3D G3DSA:3.40.50.300 2 51 1.1E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 Gene3D G3DSA:3.40.50.300 601 669 4.9E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 Gene3D G3DSA:3.40.50.300 820 938 4.9E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 Gene3D G3DSA:3.40.50.300 477 595 1.1E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 PANTHER PTHR32282:SF2 1 940 0.0 T 23-04-2016 VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 Gene3D G3DSA:1.10.8.280 285 405 1.4E-42 T 23-04-2016 VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 PANTHER PTHR32282 1 940 0.0 T 23-04-2016 VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 Pfam PF00005 ABC transporter 622 859 6.9E-10 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 924 0.0 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 Gene3D G3DSA:1.20.1580.10 693 819 4.1E-54 T 23-04-2016 VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 Gene3D G3DSA:1.20.1580.10 406 476 1.2E-53 T 23-04-2016 VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 Gene3D G3DSA:1.20.1580.10 91 129 1.2E-53 T 23-04-2016 VV93_RS13595 14dcd8b70f2e962661dd907311293284 940 Gene3D G3DSA:1.20.1580.10 250 283 1.2E-53 T 23-04-2016 VV93_RS14520 b61ab9a765fe3b7bf8908f04da96c268 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 471 604 5.1E-37 T 23-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VV93_RS14520 b61ab9a765fe3b7bf8908f04da96c268 608 SMART SM00100 11 128 7.4E-4 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain VV93_RS14520 b61ab9a765fe3b7bf8908f04da96c268 608 SUPERFAMILY SSF51206 8 128 4.06E-16 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like VV93_RS14520 b61ab9a765fe3b7bf8908f04da96c268 608 Gene3D G3DSA:2.60.120.10 8 128 1.0E-11 T 23-04-2016 IPR014710 RmlC-like jelly roll fold VV93_RS14520 b61ab9a765fe3b7bf8908f04da96c268 608 PANTHER PTHR11911 147 356 5.2E-33 T 23-04-2016 VV93_RS14520 b61ab9a765fe3b7bf8908f04da96c268 608 PANTHER PTHR11911:SF68 147 356 5.2E-33 T 23-04-2016 VV93_RS14520 b61ab9a765fe3b7bf8908f04da96c268 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 432 2.8E-41 T 23-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VV93_RS14520 b61ab9a765fe3b7bf8908f04da96c268 608 Gene3D G3DSA:3.10.580.10 147 277 6.9E-17 T 23-04-2016 VV93_RS14520 b61ab9a765fe3b7bf8908f04da96c268 608 SUPERFAMILY SSF54631 144 276 1.97E-17 T 23-04-2016 VV93_RS14520 b61ab9a765fe3b7bf8908f04da96c268 608 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 2.5E-9 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain VV93_RS03585 5017ee312314c6bf12eaf22320a284f6 64 PIRSF PIRSF039003 1 64 4.4E-32 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VV93_RS03585 5017ee312314c6bf12eaf22320a284f6 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 63 1.6E-32 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VV93_RS03585 5017ee312314c6bf12eaf22320a284f6 64 Gene3D G3DSA:1.10.10.600 1 64 6.5E-33 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VV93_RS03585 5017ee312314c6bf12eaf22320a284f6 64 PANTHER PTHR37532 1 64 1.4E-31 T 23-04-2016 VV93_RS03585 5017ee312314c6bf12eaf22320a284f6 64 SUPERFAMILY SSF140319 1 63 4.05E-27 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VV93_RS03585 5017ee312314c6bf12eaf22320a284f6 64 Pfam PF04384 Iron-sulphur cluster assembly 1 64 2.7E-32 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VV93_RS03585 5017ee312314c6bf12eaf22320a284f6 64 PANTHER PTHR37532:SF1 1 64 1.4E-31 T 23-04-2016 VV93_RS04425 10730ca2cb1a85e0814ea4b0fc3a007a 362 Pfam PF03462 PCRF domain 13 205 2.3E-75 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VV93_RS04425 10730ca2cb1a85e0814ea4b0fc3a007a 362 SUPERFAMILY SSF75620 12 355 4.84E-137 T 23-04-2016 VV93_RS04425 10730ca2cb1a85e0814ea4b0fc3a007a 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VV93_RS04425 10730ca2cb1a85e0814ea4b0fc3a007a 362 SMART SM00937 67 180 3.4E-67 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VV93_RS04425 10730ca2cb1a85e0814ea4b0fc3a007a 362 Gene3D G3DSA:1.20.58.410 7 94 3.1E-24 T 23-04-2016 VV93_RS04425 10730ca2cb1a85e0814ea4b0fc3a007a 362 PANTHER PTHR11075 1 358 7.9E-179 T 23-04-2016 VV93_RS04425 10730ca2cb1a85e0814ea4b0fc3a007a 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 1.9E-170 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VV93_RS04425 10730ca2cb1a85e0814ea4b0fc3a007a 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.526 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VV93_RS04425 10730ca2cb1a85e0814ea4b0fc3a007a 362 PANTHER PTHR11075:SF9 1 358 7.9E-179 T 23-04-2016 VV93_RS04425 10730ca2cb1a85e0814ea4b0fc3a007a 362 Gene3D G3DSA:3.30.160.20 217 291 8.5E-36 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain VV93_RS04425 10730ca2cb1a85e0814ea4b0fc3a007a 362 Pfam PF00472 RF-1 domain 218 323 6.8E-41 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VV93_RS13810 a4339cdad3e342c9f3cbe03b7aa0601e 594 Pfam PF00263 Bacterial type II and III secretion system protein 434 592 1.8E-45 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 VV93_RS13810 a4339cdad3e342c9f3cbe03b7aa0601e 594 PANTHER PTHR30604 386 594 1.1E-132 T 23-04-2016 VV93_RS13810 a4339cdad3e342c9f3cbe03b7aa0601e 594 PANTHER PTHR30604 39 368 1.1E-132 T 23-04-2016 VV93_RS13810 a4339cdad3e342c9f3cbe03b7aa0601e 594 PRINTS PR00811 Bacterial general secretion pathway protein D signature 430 454 9.4E-21 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS13810 a4339cdad3e342c9f3cbe03b7aa0601e 594 PRINTS PR00811 Bacterial general secretion pathway protein D signature 557 575 9.4E-21 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS13810 a4339cdad3e342c9f3cbe03b7aa0601e 594 PRINTS PR00811 Bacterial general secretion pathway protein D signature 465 475 9.4E-21 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS13810 a4339cdad3e342c9f3cbe03b7aa0601e 594 PRINTS PR00811 Bacterial general secretion pathway protein D signature 325 335 9.4E-21 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS13810 a4339cdad3e342c9f3cbe03b7aa0601e 594 PRINTS PR00811 Bacterial general secretion pathway protein D signature 580 594 9.4E-21 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS13810 a4339cdad3e342c9f3cbe03b7aa0601e 594 SMART SM00965 186 234 7.2E-10 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VV93_RS13810 a4339cdad3e342c9f3cbe03b7aa0601e 594 Pfam PF03958 Bacterial type II/III secretion system short domain 260 325 1.3E-11 T 23-04-2016 IPR005644 NolW-like VV93_RS13810 a4339cdad3e342c9f3cbe03b7aa0601e 594 Pfam PF07660 Secretin and TonB N terminus short domain 186 234 8.5E-7 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VV93_RS13810 a4339cdad3e342c9f3cbe03b7aa0601e 594 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 538 571 - T 23-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VV93_RS13810 a4339cdad3e342c9f3cbe03b7aa0601e 594 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 161 592 1.7E-162 T 23-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 VV93_RS03280 295edeca0877c735a14a7d238ba77ebd 325 PANTHER PTHR11079:SF73 6 323 1.2E-151 T 23-04-2016 VV93_RS03280 295edeca0877c735a14a7d238ba77ebd 325 SUPERFAMILY SSF55174 17 67 1.06E-10 T 23-04-2016 VV93_RS03280 295edeca0877c735a14a7d238ba77ebd 325 Pfam PF01479 S4 domain 18 65 1.1E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS03280 295edeca0877c735a14a7d238ba77ebd 325 Gene3D G3DSA:3.10.290.10 18 67 1.3E-12 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS03280 295edeca0877c735a14a7d238ba77ebd 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS03280 295edeca0877c735a14a7d238ba77ebd 325 SUPERFAMILY SSF55120 78 315 4.93E-80 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS03280 295edeca0877c735a14a7d238ba77ebd 325 Pfam PF00849 RNA pseudouridylate synthase 92 241 1.5E-29 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS03280 295edeca0877c735a14a7d238ba77ebd 325 PANTHER PTHR11079 6 323 1.2E-151 T 23-04-2016 VV93_RS03280 295edeca0877c735a14a7d238ba77ebd 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 4.8E-106 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS03280 295edeca0877c735a14a7d238ba77ebd 325 SMART SM00363 18 83 1.3E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS11360 1b88d323597e7069d69226ba1fb42586 255 PANTHER PTHR10108:SF836 72 223 5.0E-80 T 23-04-2016 VV93_RS11360 1b88d323597e7069d69226ba1fb42586 255 Gene3D G3DSA:3.40.50.150 74 212 4.9E-17 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS11360 1b88d323597e7069d69226ba1fb42586 255 SUPERFAMILY SSF53335 73 212 1.54E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS11360 1b88d323597e7069d69226ba1fb42586 255 Pfam PF08241 Methyltransferase domain 74 125 2.8E-9 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 VV93_RS11360 1b88d323597e7069d69226ba1fb42586 255 PANTHER PTHR10108 72 223 5.0E-80 T 23-04-2016 VV93_RS11810 186ac0a7e25926b9f65021481c895b09 513 PANTHER PTHR11985:SF1 1 497 8.5E-195 T 23-04-2016 VV93_RS11810 186ac0a7e25926b9f65021481c895b09 513 SUPERFAMILY SSF51905 11 268 8.14E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS11810 186ac0a7e25926b9f65021481c895b09 513 SUPERFAMILY SSF51905 320 330 8.14E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS11810 186ac0a7e25926b9f65021481c895b09 513 PANTHER PTHR11985 1 497 8.5E-195 T 23-04-2016 VV93_RS11810 186ac0a7e25926b9f65021481c895b09 513 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 360 370 - T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VV93_RS11810 186ac0a7e25926b9f65021481c895b09 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 355 367 2.7E-29 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VV93_RS11810 186ac0a7e25926b9f65021481c895b09 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 86 98 2.7E-29 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VV93_RS11810 186ac0a7e25926b9f65021481c895b09 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 12 24 2.7E-29 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VV93_RS11810 186ac0a7e25926b9f65021481c895b09 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 41 53 2.7E-29 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VV93_RS11810 186ac0a7e25926b9f65021481c895b09 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 321 327 2.7E-29 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VV93_RS11810 186ac0a7e25926b9f65021481c895b09 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 25 35 2.7E-29 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VV93_RS11810 186ac0a7e25926b9f65021481c895b09 513 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 17 34 - T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VV93_RS11810 186ac0a7e25926b9f65021481c895b09 513 Gene3D G3DSA:3.50.50.60 8 285 2.3E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS11810 186ac0a7e25926b9f65021481c895b09 513 SUPERFAMILY SSF54373 234 327 3.14E-7 T 23-04-2016 VV93_RS11810 186ac0a7e25926b9f65021481c895b09 513 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 389 494 7.4E-10 T 23-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VV93_RS11810 186ac0a7e25926b9f65021481c895b09 513 Pfam PF01266 FAD dependent oxidoreductase 13 331 8.0E-49 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VV93_RS04665 6909183b79557009be3c1d1eeab4be44 311 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 305 24.115 T 23-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 VV93_RS04665 6909183b79557009be3c1d1eeab4be44 311 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 175 302 1.5E-46 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VV93_RS04665 6909183b79557009be3c1d1eeab4be44 311 PANTHER PTHR38685 1 311 1.1E-64 T 23-04-2016 VV93_RS04665 6909183b79557009be3c1d1eeab4be44 311 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 303 4.3E-86 T 23-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 VV93_RS04665 6909183b79557009be3c1d1eeab4be44 311 PANTHER PTHR38685:SF1 1 311 1.1E-64 T 23-04-2016 VV93_RS04665 6909183b79557009be3c1d1eeab4be44 311 Gene3D G3DSA:3.30.1400.10 175 309 8.3E-58 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VV93_RS04665 6909183b79557009be3c1d1eeab4be44 311 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 176 311 3.0E-77 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VV93_RS04665 6909183b79557009be3c1d1eeab4be44 311 SMART SM00771 173 303 6.6E-70 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VV93_RS04665 6909183b79557009be3c1d1eeab4be44 311 SUPERFAMILY SSF64383 175 307 3.14E-48 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VV93_RS01765 c68b3f298759975c262ba9826a3e58e2 388 PANTHER PTHR11374 1 372 8.6E-209 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 VV93_RS01765 c68b3f298759975c262ba9826a3e58e2 388 SUPERFAMILY SSF52413 283 387 1.7E-28 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 VV93_RS01765 c68b3f298759975c262ba9826a3e58e2 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 6.7E-113 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 VV93_RS01765 c68b3f298759975c262ba9826a3e58e2 388 SMART SM00984 300 387 6.6E-14 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 VV93_RS01765 c68b3f298759975c262ba9826a3e58e2 388 PIRSF PIRSF000124 1 388 7.6E-136 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 VV93_RS01765 c68b3f298759975c262ba9826a3e58e2 388 Gene3D G3DSA:1.10.1040.10 198 284 5.5E-36 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VV93_RS01765 c68b3f298759975c262ba9826a3e58e2 388 PANTHER PTHR11374:SF17 1 372 8.6E-209 T 23-04-2016 VV93_RS01765 c68b3f298759975c262ba9826a3e58e2 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 374 6.6E-9 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 VV93_RS01765 c68b3f298759975c262ba9826a3e58e2 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 4.6E-28 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 VV93_RS01765 c68b3f298759975c262ba9826a3e58e2 388 Gene3D G3DSA:3.40.50.720 285 388 8.4E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01765 c68b3f298759975c262ba9826a3e58e2 388 SUPERFAMILY SSF51735 1 194 3.32E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01765 c68b3f298759975c262ba9826a3e58e2 388 Gene3D G3DSA:3.40.50.720 1 197 3.9E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01765 c68b3f298759975c262ba9826a3e58e2 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 6.1E-32 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 VV93_RS01765 c68b3f298759975c262ba9826a3e58e2 388 PIRSF PIRSF500134 1 343 9.0E-118 T 23-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 VV93_RS01765 c68b3f298759975c262ba9826a3e58e2 388 SUPERFAMILY SSF48179 191 287 3.06E-31 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VV93_RS00275 56cb6f256d233a498c5aa8466e31dec2 190 SUPERFAMILY SSF88659 123 189 4.86E-6 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS00275 56cb6f256d233a498c5aa8466e31dec2 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 189 1.5E-20 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS00275 56cb6f256d233a498c5aa8466e31dec2 190 PANTHER PTHR30173 1 42 3.8E-26 T 23-04-2016 VV93_RS00275 56cb6f256d233a498c5aa8466e31dec2 190 PANTHER PTHR30173 58 189 3.8E-26 T 23-04-2016 VV93_RS00275 56cb6f256d233a498c5aa8466e31dec2 190 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 5 189 1.1E-61 T 23-04-2016 IPR011517 RNA polymerase sigma-70 ECF-like VV93_RS00275 56cb6f256d233a498c5aa8466e31dec2 190 Pfam PF07638 ECF sigma factor 6 189 1.6E-31 T 23-04-2016 IPR011517 RNA polymerase sigma-70 ECF-like VV93_RS00275 56cb6f256d233a498c5aa8466e31dec2 190 Gene3D G3DSA:1.10.10.10 144 189 3.9E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS00275 56cb6f256d233a498c5aa8466e31dec2 190 PANTHER PTHR30173:SF5 1 42 3.8E-26 T 23-04-2016 VV93_RS00275 56cb6f256d233a498c5aa8466e31dec2 190 PANTHER PTHR30173:SF5 58 189 3.8E-26 T 23-04-2016 VV93_RS09660 1872c714a4e84a0fdfdde7487ae1d519 820 Gene3D G3DSA:3.10.580.10 688 817 2.3E-11 T 23-04-2016 VV93_RS09660 1872c714a4e84a0fdfdde7487ae1d519 820 PANTHER PTHR33121 182 661 7.2E-75 T 23-04-2016 VV93_RS09660 1872c714a4e84a0fdfdde7487ae1d519 820 Pfam PF13426 PAS domain 140 239 3.2E-8 T 23-04-2016 IPR000014 PAS domain VV93_RS09660 1872c714a4e84a0fdfdde7487ae1d519 820 SUPERFAMILY SSF55785 126 238 8.2E-18 T 23-04-2016 IPR000014 PAS domain VV93_RS09660 1872c714a4e84a0fdfdde7487ae1d519 820 Gene3D G3DSA:3.30.70.270 254 412 1.2E-5 T 23-04-2016 VV93_RS09660 1872c714a4e84a0fdfdde7487ae1d519 820 SUPERFAMILY SSF141868 422 662 1.26E-64 T 23-04-2016 IPR001633 EAL domain VV93_RS09660 1872c714a4e84a0fdfdde7487ae1d519 820 PANTHER PTHR33121:SF10 182 661 7.2E-75 T 23-04-2016 VV93_RS09660 1872c714a4e84a0fdfdde7487ae1d519 820 SMART SM00091 129 195 1.8E-7 T 23-04-2016 IPR000014 PAS domain VV93_RS09660 1872c714a4e84a0fdfdde7487ae1d519 820 Gene3D G3DSA:3.20.20.450 419 661 7.3E-68 T 23-04-2016 IPR001633 EAL domain VV93_RS09660 1872c714a4e84a0fdfdde7487ae1d519 820 SMART SM00052 416 663 4.7E-69 T 23-04-2016 IPR001633 EAL domain VV93_RS09660 1872c714a4e84a0fdfdde7487ae1d519 820 Pfam PF00563 EAL domain 426 658 3.1E-59 T 23-04-2016 IPR001633 EAL domain VV93_RS09660 1872c714a4e84a0fdfdde7487ae1d519 820 SUPERFAMILY SSF54631 687 817 3.16E-12 T 23-04-2016 VV93_RS09660 1872c714a4e84a0fdfdde7487ae1d519 820 Gene3D G3DSA:3.30.450.20 140 238 2.6E-15 T 23-04-2016 VV93_RS09660 1872c714a4e84a0fdfdde7487ae1d519 820 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 241 3.1E-12 T 23-04-2016 IPR000014 PAS domain VV93_RS13545 8be3e8f0fcdb2d46928104d7f7f17dd7 373 Pfam PF14559 Tetratricopeptide repeat 195 250 1.5E-5 T 23-04-2016 VV93_RS13545 8be3e8f0fcdb2d46928104d7f7f17dd7 373 SUPERFAMILY SSF48452 185 347 2.72E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS13545 8be3e8f0fcdb2d46928104d7f7f17dd7 373 SMART SM00028 219 252 15.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS13545 8be3e8f0fcdb2d46928104d7f7f17dd7 373 SMART SM00028 185 218 24.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS13545 8be3e8f0fcdb2d46928104d7f7f17dd7 373 SMART SM00028 319 352 340.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS13545 8be3e8f0fcdb2d46928104d7f7f17dd7 373 SMART SM00028 285 318 250.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS13545 8be3e8f0fcdb2d46928104d7f7f17dd7 373 Gene3D G3DSA:1.25.40.10 186 347 1.0E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS05225 11738307448c89785c757498efa7d7d2 221 PANTHER PTHR35011 1 129 4.7E-86 T 23-04-2016 VV93_RS05225 11738307448c89785c757498efa7d7d2 221 PANTHER PTHR35011 152 202 4.7E-86 T 23-04-2016 VV93_RS05225 11738307448c89785c757498efa7d7d2 221 PANTHER PTHR35011:SF1 1 129 4.7E-86 T 23-04-2016 VV93_RS05225 11738307448c89785c757498efa7d7d2 221 PANTHER PTHR35011:SF1 152 202 4.7E-86 T 23-04-2016 VV93_RS05225 11738307448c89785c757498efa7d7d2 221 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 181 4.3E-32 T 23-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VV93_RS13620 f08c9c36ed62fe9f55a423bfa13731e3 444 PANTHER PTHR10110:SF86 8 417 7.9E-96 T 23-04-2016 VV93_RS13620 f08c9c36ed62fe9f55a423bfa13731e3 444 PANTHER PTHR10110 8 417 7.9E-96 T 23-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 VV93_RS13620 f08c9c36ed62fe9f55a423bfa13731e3 444 Pfam PF00999 Sodium/hydrogen exchanger family 14 416 4.6E-56 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VV93_RS17985 72045a90fca1946b5002c1b82dc2bc97 203 PANTHER PTHR11938 1 203 1.3E-98 T 23-04-2016 VV93_RS17985 72045a90fca1946b5002c1b82dc2bc97 203 Gene3D G3DSA:3.60.20.10 1 203 7.7E-75 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VV93_RS17985 72045a90fca1946b5002c1b82dc2bc97 203 Pfam PF00310 Glutamine amidotransferases class-II 2 203 1.3E-74 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain VV93_RS17985 72045a90fca1946b5002c1b82dc2bc97 203 PANTHER PTHR11938:SF1 1 203 1.3E-98 T 23-04-2016 VV93_RS17985 72045a90fca1946b5002c1b82dc2bc97 203 SUPERFAMILY SSF56235 1 203 6.47E-63 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VV93_RS02075 6f26298a932231267a1c1afbcafc4b97 212 Pfam PF02441 Flavoprotein 7 144 9.6E-25 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 VV93_RS02075 6f26298a932231267a1c1afbcafc4b97 212 PANTHER PTHR30108:SF2 78 207 4.5E-82 T 23-04-2016 VV93_RS02075 6f26298a932231267a1c1afbcafc4b97 212 PANTHER PTHR30108:SF2 1 61 4.5E-82 T 23-04-2016 VV93_RS02075 6f26298a932231267a1c1afbcafc4b97 212 Gene3D G3DSA:3.40.50.1950 7 208 1.0E-74 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 VV93_RS02075 6f26298a932231267a1c1afbcafc4b97 212 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 6 203 34.838 T 23-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 VV93_RS02075 6f26298a932231267a1c1afbcafc4b97 212 PANTHER PTHR30108 78 207 4.5E-82 T 23-04-2016 VV93_RS02075 6f26298a932231267a1c1afbcafc4b97 212 PANTHER PTHR30108 1 61 4.5E-82 T 23-04-2016 VV93_RS02075 6f26298a932231267a1c1afbcafc4b97 212 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 8 201 2.3E-57 T 23-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 VV93_RS02075 6f26298a932231267a1c1afbcafc4b97 212 SUPERFAMILY SSF52507 6 202 9.55E-57 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 VV93_RS07195 d37e11248ac72b4176e0cbb97b9a961e 222 PANTHER PTHR11260 1 221 8.1E-98 T 23-04-2016 VV93_RS07195 d37e11248ac72b4176e0cbb97b9a961e 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 83 1.7E-16 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VV93_RS07195 d37e11248ac72b4176e0cbb97b9a961e 222 SUPERFAMILY SSF47616 95 219 9.14E-21 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VV93_RS07195 d37e11248ac72b4176e0cbb97b9a961e 222 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 6 220 5.4E-79 T 23-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 VV93_RS07195 d37e11248ac72b4176e0cbb97b9a961e 222 Gene3D G3DSA:3.40.30.10 7 82 7.1E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS07195 d37e11248ac72b4176e0cbb97b9a961e 222 PANTHER PTHR11260:SF289 1 221 8.1E-98 T 23-04-2016 VV93_RS07195 d37e11248ac72b4176e0cbb97b9a961e 222 Gene3D G3DSA:1.20.1050.10 94 220 1.4E-43 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VV93_RS07195 d37e11248ac72b4176e0cbb97b9a961e 222 SUPERFAMILY SSF52833 4 89 6.73E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS00790 5868c1275501016e3235f4cdbe4de2f1 362 Gene3D G3DSA:3.40.50.1970 4 156 1.1E-38 T 23-04-2016 VV93_RS00790 5868c1275501016e3235f4cdbe4de2f1 362 SUPERFAMILY SSF56796 3 353 6.28E-85 T 23-04-2016 VV93_RS00790 5868c1275501016e3235f4cdbe4de2f1 362 PANTHER PTHR11496:SF73 1 359 1.0E-174 T 23-04-2016 VV93_RS00790 5868c1275501016e3235f4cdbe4de2f1 362 Gene3D G3DSA:1.20.1090.10 158 354 5.3E-64 T 23-04-2016 VV93_RS00790 5868c1275501016e3235f4cdbe4de2f1 362 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 148 176 - T 23-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VV93_RS00790 5868c1275501016e3235f4cdbe4de2f1 362 PIRSF PIRSF000112 1 358 2.6E-89 T 23-04-2016 VV93_RS00790 5868c1275501016e3235f4cdbe4de2f1 362 PANTHER PTHR11496 1 359 1.0E-174 T 23-04-2016 VV93_RS00790 5868c1275501016e3235f4cdbe4de2f1 362 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 239 259 - T 23-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VV93_RS00790 5868c1275501016e3235f4cdbe4de2f1 362 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 344 1.4E-64 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 VV93_RS08125 330e91af1d70d4fd0dc645273ee83ff7 552 Gene3D G3DSA:3.30.70.20 169 238 9.5E-13 T 23-04-2016 VV93_RS08125 330e91af1d70d4fd0dc645273ee83ff7 552 SUPERFAMILY SSF54862 149 237 2.39E-36 T 23-04-2016 VV93_RS08125 330e91af1d70d4fd0dc645273ee83ff7 552 SUPERFAMILY SSF54862 410 510 2.39E-36 T 23-04-2016 VV93_RS08125 330e91af1d70d4fd0dc645273ee83ff7 552 Gene3D G3DSA:3.30.70.20 416 481 9.8E-19 T 23-04-2016 VV93_RS08125 330e91af1d70d4fd0dc645273ee83ff7 552 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 419 430 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV93_RS08125 330e91af1d70d4fd0dc645273ee83ff7 552 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 450 461 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV93_RS08125 330e91af1d70d4fd0dc645273ee83ff7 552 Pfam PF00037 4Fe-4S binding domain 445 465 9.1E-5 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV93_RS08125 330e91af1d70d4fd0dc645273ee83ff7 552 PANTHER PTHR24960 89 251 7.2E-103 T 23-04-2016 VV93_RS08125 330e91af1d70d4fd0dc645273ee83ff7 552 PANTHER PTHR24960 411 544 7.2E-103 T 23-04-2016 VV93_RS08125 330e91af1d70d4fd0dc645273ee83ff7 552 Pfam PF12838 4Fe-4S dicluster domain 184 230 1.0E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV93_RS08125 330e91af1d70d4fd0dc645273ee83ff7 552 PANTHER PTHR24960:SF43 89 251 7.2E-103 T 23-04-2016 VV93_RS08125 330e91af1d70d4fd0dc645273ee83ff7 552 PANTHER PTHR24960:SF43 411 544 7.2E-103 T 23-04-2016 VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 SMART SM00091 158 223 25.0 T 23-04-2016 IPR000014 PAS domain VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 SMART SM00091 38 101 200.0 T 23-04-2016 IPR000014 PAS domain VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 SMART SM00091 279 346 0.0026 T 23-04-2016 IPR000014 PAS domain VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 SMART SM00267 401 577 1.7E-68 T 23-04-2016 IPR000160 GGDEF domain VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 Pfam PF13188 PAS domain 49 75 0.27 T 23-04-2016 IPR000014 PAS domain VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 SUPERFAMILY SSF55785 169 261 8.9E-6 T 23-04-2016 IPR000014 PAS domain VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 401 1.7E-13 T 23-04-2016 IPR000014 PAS domain VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 SUPERFAMILY SSF55785 266 392 1.73E-19 T 23-04-2016 IPR000014 PAS domain VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 Gene3D G3DSA:3.30.450.20 266 392 3.5E-20 T 23-04-2016 VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 PANTHER PTHR10799 445 573 2.2E-31 T 23-04-2016 VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 PANTHER PTHR10799 1 58 2.2E-31 T 23-04-2016 VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 Pfam PF08448 PAS fold 285 395 5.7E-18 T 23-04-2016 IPR013656 PAS fold-4 VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 576 1.7E-49 T 23-04-2016 IPR000160 GGDEF domain VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 SUPERFAMILY SSF55073 417 576 1.54E-46 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 Pfam PF00990 Diguanylate cyclase, GGDEF domain 413 573 6.4E-49 T 23-04-2016 IPR000160 GGDEF domain VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 Gene3D G3DSA:3.30.450.20 164 264 1.2E-4 T 23-04-2016 VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 PANTHER PTHR10799:SF728 445 573 2.2E-31 T 23-04-2016 VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 PANTHER PTHR10799:SF728 1 58 2.2E-31 T 23-04-2016 VV93_RS02950 7a76184f149fe2e67c51db1941df69f5 599 Gene3D G3DSA:3.30.70.270 414 577 2.0E-51 T 23-04-2016 VV93_RS09280 4e18d8633ec23d31cf0866c849e8a7dd 911 Pfam PF00990 Diguanylate cyclase, GGDEF domain 488 618 6.2E-13 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09280 4e18d8633ec23d31cf0866c849e8a7dd 911 SUPERFAMILY SSF55073 492 633 6.51E-16 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS09280 4e18d8633ec23d31cf0866c849e8a7dd 911 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 361 480 1.4E-9 T 23-04-2016 IPR000014 PAS domain VV93_RS09280 4e18d8633ec23d31cf0866c849e8a7dd 911 Gene3D G3DSA:3.30.70.270 488 624 3.4E-16 T 23-04-2016 VV93_RS09280 4e18d8633ec23d31cf0866c849e8a7dd 911 Gene3D G3DSA:3.30.450.20 354 469 1.0E-11 T 23-04-2016 VV93_RS09280 4e18d8633ec23d31cf0866c849e8a7dd 911 SMART SM00052 653 903 2.1E-97 T 23-04-2016 IPR001633 EAL domain VV93_RS09280 4e18d8633ec23d31cf0866c849e8a7dd 911 Pfam PF13426 PAS domain 374 474 4.0E-10 T 23-04-2016 IPR000014 PAS domain VV93_RS09280 4e18d8633ec23d31cf0866c849e8a7dd 911 SUPERFAMILY SSF55785 354 472 1.13E-11 T 23-04-2016 IPR000014 PAS domain VV93_RS09280 4e18d8633ec23d31cf0866c849e8a7dd 911 Pfam PF00563 EAL domain 659 898 2.4E-69 T 23-04-2016 IPR001633 EAL domain VV93_RS09280 4e18d8633ec23d31cf0866c849e8a7dd 911 SMART SM00267 475 639 1.6E-7 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09280 4e18d8633ec23d31cf0866c849e8a7dd 911 Gene3D G3DSA:3.20.20.450 658 908 3.2E-86 T 23-04-2016 IPR001633 EAL domain VV93_RS09280 4e18d8633ec23d31cf0866c849e8a7dd 911 PANTHER PTHR33121:SF13 657 910 6.2E-69 T 23-04-2016 VV93_RS09280 4e18d8633ec23d31cf0866c849e8a7dd 911 SUPERFAMILY SSF141868 659 907 8.11E-81 T 23-04-2016 IPR001633 EAL domain VV93_RS09280 4e18d8633ec23d31cf0866c849e8a7dd 911 PANTHER PTHR33121 657 910 6.2E-69 T 23-04-2016 VV93_RS09280 4e18d8633ec23d31cf0866c849e8a7dd 911 Pfam PF05228 CHASE4 domain 60 216 3.2E-27 T 23-04-2016 IPR007892 CHASE4 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 6.5E-64 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 PANTHER PTHR22912 1 459 5.8E-270 T 23-04-2016 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 Gene3D G3DSA:3.30.390.30 336 462 2.8E-44 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 Gene3D G3DSA:3.50.50.60 6 149 5.2E-66 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 Gene3D G3DSA:3.50.50.60 272 335 5.2E-66 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 PANTHER PTHR22912:SF160 1 459 5.8E-270 T 23-04-2016 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 3.2E-35 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 3.0E-149 T 23-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 3.4E-68 T 23-04-2016 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 3.4E-68 T 23-04-2016 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 3.4E-68 T 23-04-2016 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.4E-68 T 23-04-2016 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 3.4E-68 T 23-04-2016 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 3.4E-68 T 23-04-2016 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 3.4E-68 T 23-04-2016 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.4E-68 T 23-04-2016 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 3.4E-68 T 23-04-2016 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 SUPERFAMILY SSF51905 1 322 9.72E-58 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 SUPERFAMILY SSF55424 343 466 6.36E-39 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 Gene3D G3DSA:3.50.50.60 152 271 3.1E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 8.8E-41 T 23-04-2016 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.8E-41 T 23-04-2016 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 8.8E-41 T 23-04-2016 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 8.8E-41 T 23-04-2016 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 8.8E-41 T 23-04-2016 VV93_RS12525 d36fec7e5c9e03de236a2a9a1b7b093f 475 PIRSF PIRSF000350 1 469 4.3E-82 T 23-04-2016 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 Pfam PF00679 Elongation factor G C-terminus 597 683 1.7E-28 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 174 3.5E-25 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 PANTHER PTHR23115 301 688 0.0 T 23-04-2016 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 PANTHER PTHR23115 3 174 0.0 T 23-04-2016 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 PANTHER PTHR23115 251 279 0.0 T 23-04-2016 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 SMART SM00889 477 595 1.2E-62 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 Pfam PF03764 Elongation factor G, domain IV 476 594 4.1E-44 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 Gene3D G3DSA:3.30.230.10 481 596 3.8E-45 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.2E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.2E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.2E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.2E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 278 8.1E-61 T 23-04-2016 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 1.6E-16 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 SUPERFAMILY SSF50447 261 399 5.52E-32 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 Gene3D G3DSA:3.30.70.870 402 477 1.0E-31 T 23-04-2016 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 PANTHER PTHR23115:SF154 301 688 0.0 T 23-04-2016 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 PANTHER PTHR23115:SF154 3 174 0.0 T 23-04-2016 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 PANTHER PTHR23115:SF154 251 279 0.0 T 23-04-2016 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 Gene3D G3DSA:3.40.50.300 2 283 3.0E-96 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 SUPERFAMILY SSF54980 401 478 1.65E-20 T 23-04-2016 IPR009022 Elongation factor G, III-V domain VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 SUPERFAMILY SSF52540 3 278 2.32E-99 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 Pfam PF14492 Elongation Factor G, domain II 401 474 6.1E-29 T 23-04-2016 IPR009022 Elongation factor G, III-V domain VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 SUPERFAMILY SSF54980 600 689 2.34E-29 T 23-04-2016 IPR009022 Elongation factor G, III-V domain VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 SMART SM00838 597 684 2.2E-46 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 SUPERFAMILY SSF54211 476 596 1.09E-40 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 Gene3D G3DSA:2.40.30.10 304 401 6.0E-35 T 23-04-2016 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 Gene3D G3DSA:3.30.70.240 597 682 4.0E-32 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 689 2.4E-297 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VV93_RS12045 3462f156e8538d666a3fec1ce4af9fbc 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 101.507 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VV93_RS14030 232d9f301533ab21513031665e0cfcaa 131 Pfam PF02635 DsrE/DsrF-like family 6 131 8.1E-29 T 23-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein VV93_RS14030 232d9f301533ab21513031665e0cfcaa 131 PANTHER PTHR34874 4 131 1.2E-56 T 23-04-2016 VV93_RS14030 232d9f301533ab21513031665e0cfcaa 131 PANTHER PTHR34874:SF1 4 131 1.2E-56 T 23-04-2016 VV93_RS14030 232d9f301533ab21513031665e0cfcaa 131 SUPERFAMILY SSF75169 6 131 5.1E-38 T 23-04-2016 IPR027396 DsrEFH-like VV93_RS14030 232d9f301533ab21513031665e0cfcaa 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 4.9E-55 T 23-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 VV93_RS14030 232d9f301533ab21513031665e0cfcaa 131 Gene3D G3DSA:3.40.1260.10 5 131 2.5E-33 T 23-04-2016 IPR027396 DsrEFH-like VV93_RS00350 fe042981e90361d9908da2261e3be159 680 Gene3D G3DSA:1.10.1370.10 140 349 7.2E-143 T 23-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VV93_RS00350 fe042981e90361d9908da2261e3be159 680 Gene3D G3DSA:1.10.1370.10 505 678 7.2E-143 T 23-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VV93_RS00350 fe042981e90361d9908da2261e3be159 680 Gene3D G3DSA:3.40.390.10 361 504 1.3E-58 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 VV93_RS00350 fe042981e90361d9908da2261e3be159 680 Gene3D G3DSA:1.20.1050.40 9 138 3.7E-27 T 23-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal VV93_RS00350 fe042981e90361d9908da2261e3be159 680 Pfam PF01432 Peptidase family M3 222 677 5.1E-163 T 23-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 VV93_RS00350 fe042981e90361d9908da2261e3be159 680 PANTHER PTHR11804:SF8 2 678 0.0 T 23-04-2016 VV93_RS00350 fe042981e90361d9908da2261e3be159 680 SUPERFAMILY SSF55486 1 677 2.08E-212 T 23-04-2016 VV93_RS00350 fe042981e90361d9908da2261e3be159 680 PANTHER PTHR11804 2 678 0.0 T 23-04-2016 VV93_RS10860 0262eb6376de35e562dd30baa4219add 262 Pfam PF04333 MlaA lipoprotein 48 238 1.4E-62 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VV93_RS10860 0262eb6376de35e562dd30baa4219add 262 PRINTS PR01805 VacJ lipoprotein signature 48 61 1.2E-29 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VV93_RS10860 0262eb6376de35e562dd30baa4219add 262 PRINTS PR01805 VacJ lipoprotein signature 117 134 1.2E-29 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VV93_RS10860 0262eb6376de35e562dd30baa4219add 262 PRINTS PR01805 VacJ lipoprotein signature 66 82 1.2E-29 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VV93_RS10860 0262eb6376de35e562dd30baa4219add 262 PRINTS PR01805 VacJ lipoprotein signature 154 171 1.2E-29 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VV93_RS10860 0262eb6376de35e562dd30baa4219add 262 PANTHER PTHR30035 36 261 2.0E-95 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VV93_RS10860 0262eb6376de35e562dd30baa4219add 262 PANTHER PTHR30035:SF3 36 261 2.0E-95 T 23-04-2016 VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82866 307 506 5.49E-34 T 23-04-2016 VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82714 199 282 8.37E-13 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82714 729 804 1.7E-8 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 PANTHER PTHR32063:SF18 16 1035 0.0 T 23-04-2016 VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82693 55 150 3.31E-23 T 23-04-2016 VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:3.30.2090.10 730 804 1.3E-5 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:3.30.2090.10 199 282 9.1E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:1.20.1640.10 305 510 2.4E-38 T 23-04-2016 VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82866 810 1032 4.05E-47 T 23-04-2016 VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 PANTHER PTHR32063 16 1035 0.0 T 23-04-2016 VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82693 285 338 2.33E-18 T 23-04-2016 VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82693 151 197 2.33E-18 T 23-04-2016 VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:3.30.70.1430 55 154 2.7E-28 T 23-04-2016 VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 PRINTS PR00702 Acriflavin resistance protein family signature 347 370 5.8E-26 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 PRINTS PR00702 Acriflavin resistance protein family signature 53 71 5.8E-26 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 PRINTS PR00702 Acriflavin resistance protein family signature 454 477 5.8E-26 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 PRINTS PR00702 Acriflavin resistance protein family signature 401 425 5.8E-26 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 5.8E-26 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 PRINTS PR00702 Acriflavin resistance protein family signature 25 49 5.8E-26 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:1.10.3850.10 817 1030 4.6E-57 T 23-04-2016 VV93_RS06700 a1785d6fe0b3eefb70ea22d265b49792 1035 Pfam PF00873 AcrB/AcrD/AcrF family 19 1029 2.1E-171 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 23-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 2.9E-123 T 23-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.9E-38 T 23-04-2016 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.9E-38 T 23-04-2016 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.9E-38 T 23-04-2016 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.9E-38 T 23-04-2016 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.9E-38 T 23-04-2016 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 PANTHER PTHR22912:SF48 1 315 2.4E-166 T 23-04-2016 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 Gene3D G3DSA:3.50.50.60 4 119 2.0E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 4.7E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 Gene3D G3DSA:3.50.50.60 120 234 6.8E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 3.2E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 3.2E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 3.2E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 3.2E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 3.2E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 3.2E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 3.2E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 3.2E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 3.2E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 Gene3D G3DSA:3.50.50.60 235 316 1.3E-9 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 PANTHER PTHR22912 1 315 2.4E-166 T 23-04-2016 VV93_RS06990 0ba974a77feeb02f679f517d1e32c016 319 SUPERFAMILY SSF51905 4 313 5.65E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS09105 9fb89b6b3b8e07107876bb139895d9a0 437 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 260 416 5.3E-44 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09105 9fb89b6b3b8e07107876bb139895d9a0 437 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 415 5.8E-45 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09105 9fb89b6b3b8e07107876bb139895d9a0 437 PANTHER PTHR10799 294 422 9.3E-32 T 23-04-2016 VV93_RS09105 9fb89b6b3b8e07107876bb139895d9a0 437 SMART SM00267 250 422 2.0E-56 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09105 9fb89b6b3b8e07107876bb139895d9a0 437 Gene3D G3DSA:3.30.70.270 263 418 5.8E-52 T 23-04-2016 VV93_RS09105 9fb89b6b3b8e07107876bb139895d9a0 437 SUPERFAMILY SSF55073 266 420 1.49E-46 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS09105 9fb89b6b3b8e07107876bb139895d9a0 437 PANTHER PTHR10799:SF750 294 422 9.3E-32 T 23-04-2016 VV93_RS14490 890b904071e7b3488677eb904d3ef2fe 211 Pfam PF00072 Response regulator receiver domain 7 119 5.3E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS14490 890b904071e7b3488677eb904d3ef2fe 211 SMART SM00448 5 119 1.4E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS14490 890b904071e7b3488677eb904d3ef2fe 211 PANTHER PTHR26402:SF474 5 207 2.4E-94 T 23-04-2016 VV93_RS14490 890b904071e7b3488677eb904d3ef2fe 211 PANTHER PTHR26402 5 207 2.4E-94 T 23-04-2016 VV93_RS14490 890b904071e7b3488677eb904d3ef2fe 211 Gene3D G3DSA:1.10.10.10 142 206 6.2E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS14490 890b904071e7b3488677eb904d3ef2fe 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 3.6E-20 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS14490 890b904071e7b3488677eb904d3ef2fe 211 Gene3D G3DSA:3.40.50.2300 4 131 7.2E-28 T 23-04-2016 VV93_RS14490 890b904071e7b3488677eb904d3ef2fe 211 SUPERFAMILY SSF52172 4 173 1.11E-25 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS14490 890b904071e7b3488677eb904d3ef2fe 211 SMART SM00421 147 204 5.0E-23 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS14490 890b904071e7b3488677eb904d3ef2fe 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS14490 890b904071e7b3488677eb904d3ef2fe 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS14490 890b904071e7b3488677eb904d3ef2fe 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS14490 890b904071e7b3488677eb904d3ef2fe 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS04795 d92b6f067c5c660fee8a2ef8f3b52063 404 Gene3D G3DSA:3.30.420.40 222 374 8.1E-47 T 23-04-2016 VV93_RS04795 d92b6f067c5c660fee8a2ef8f3b52063 404 Gene3D G3DSA:3.30.420.40 83 221 2.3E-35 T 23-04-2016 VV93_RS04795 d92b6f067c5c660fee8a2ef8f3b52063 404 SUPERFAMILY SSF53067 85 391 5.94E-56 T 23-04-2016 VV93_RS04795 d92b6f067c5c660fee8a2ef8f3b52063 404 SUPERFAMILY SSF46785 11 75 5.96E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS04795 d92b6f067c5c660fee8a2ef8f3b52063 404 PANTHER PTHR18964 61 286 1.3E-188 T 23-04-2016 VV93_RS04795 d92b6f067c5c660fee8a2ef8f3b52063 404 PANTHER PTHR18964 304 401 1.3E-188 T 23-04-2016 VV93_RS04795 d92b6f067c5c660fee8a2ef8f3b52063 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 23-04-2016 IPR000600 ROK family VV93_RS04795 d92b6f067c5c660fee8a2ef8f3b52063 404 PANTHER PTHR18964:SF128 61 286 1.3E-188 T 23-04-2016 VV93_RS04795 d92b6f067c5c660fee8a2ef8f3b52063 404 PANTHER PTHR18964:SF128 304 401 1.3E-188 T 23-04-2016 VV93_RS04795 d92b6f067c5c660fee8a2ef8f3b52063 404 Gene3D G3DSA:1.10.10.10 11 78 4.3E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS04795 d92b6f067c5c660fee8a2ef8f3b52063 404 Pfam PF00480 ROK family 86 390 1.4E-77 T 23-04-2016 IPR000600 ROK family VV93_RS04815 7a64a9d8d04bc5508b2c0936367a40c9 149 SUPERFAMILY SSF46785 5 135 2.05E-43 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS04815 7a64a9d8d04bc5508b2c0936367a40c9 149 Pfam PF01475 Ferric uptake regulator family 11 130 1.3E-46 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VV93_RS04815 7a64a9d8d04bc5508b2c0936367a40c9 149 PANTHER PTHR33202 1 135 2.1E-45 T 23-04-2016 VV93_RS04815 7a64a9d8d04bc5508b2c0936367a40c9 149 Gene3D G3DSA:1.10.10.10 2 82 1.5E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS07105 2ec4348a909a2a276ad1bac0290b090a 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 6.9E-75 T 23-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 VV93_RS07105 2ec4348a909a2a276ad1bac0290b090a 342 PIRSF PIRSF017020 4 336 9.8E-125 T 23-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 VV93_RS07105 2ec4348a909a2a276ad1bac0290b090a 342 PANTHER PTHR15162 1 330 4.8E-58 T 23-04-2016 VV93_RS07105 2ec4348a909a2a276ad1bac0290b090a 342 Gene3D G3DSA:3.40.630.10 48 238 1.2E-9 T 23-04-2016 VV93_RS07105 2ec4348a909a2a276ad1bac0290b090a 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 135.796 T 23-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 VV93_RS07105 2ec4348a909a2a276ad1bac0290b090a 342 SUPERFAMILY SSF53187 9 329 3.55E-76 T 23-04-2016 VV93_RS04855 357580ae679ac91485871a09d001ba56 127 PANTHER PTHR11803 1 125 3.3E-58 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family VV93_RS04855 357580ae679ac91485871a09d001ba56 127 Gene3D G3DSA:3.30.1330.40 2 125 4.4E-50 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VV93_RS04855 357580ae679ac91485871a09d001ba56 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 125 7.0E-50 T 23-04-2016 IPR006056 RidA family VV93_RS04855 357580ae679ac91485871a09d001ba56 127 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 23-04-2016 IPR019897 RidA, conserved site VV93_RS04855 357580ae679ac91485871a09d001ba56 127 Pfam PF01042 Endoribonuclease L-PSP 9 125 3.1E-43 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family VV93_RS04855 357580ae679ac91485871a09d001ba56 127 SUPERFAMILY SSF55298 3 126 1.57E-47 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VV93_RS03880 ab031b216163106bc4d02845b18cb827 198 PRINTS PR00773 GrpE protein signature 67 83 1.1E-28 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VV93_RS03880 ab031b216163106bc4d02845b18cb827 198 PRINTS PR00773 GrpE protein signature 177 196 1.1E-28 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VV93_RS03880 ab031b216163106bc4d02845b18cb827 198 PRINTS PR00773 GrpE protein signature 150 165 1.1E-28 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VV93_RS03880 ab031b216163106bc4d02845b18cb827 198 PRINTS PR00773 GrpE protein signature 95 110 1.1E-28 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VV93_RS03880 ab031b216163106bc4d02845b18cb827 198 Gene3D G3DSA:3.90.20.20 43 141 1.1E-33 T 23-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil VV93_RS03880 ab031b216163106bc4d02845b18cb827 198 Hamap MF_01151 Protein GrpE [grpE]. 2 198 22.591 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VV93_RS03880 ab031b216163106bc4d02845b18cb827 198 Gene3D G3DSA:2.30.22.10 142 198 1.3E-27 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 VV93_RS03880 ab031b216163106bc4d02845b18cb827 198 SUPERFAMILY SSF51064 143 198 4.32E-20 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 VV93_RS03880 ab031b216163106bc4d02845b18cb827 198 Pfam PF01025 GrpE 36 198 2.6E-56 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VV93_RS03880 ab031b216163106bc4d02845b18cb827 198 SUPERFAMILY SSF58014 44 142 6.28E-30 T 23-04-2016 VV93_RS03880 ab031b216163106bc4d02845b18cb827 198 PANTHER PTHR21237 1 7 3.3E-65 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VV93_RS03880 ab031b216163106bc4d02845b18cb827 198 PANTHER PTHR21237 25 198 3.3E-65 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VV93_RS03880 ab031b216163106bc4d02845b18cb827 198 ProSitePatterns PS01071 grpE protein signature. 153 196 - T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VV93_RS14915 70191408e10f5144b78f270d408fc114 257 Gene3D G3DSA:3.20.20.70 1 252 1.8E-62 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS14915 70191408e10f5144b78f270d408fc114 257 PANTHER PTHR34266 1 253 9.0E-159 T 23-04-2016 VV93_RS14915 70191408e10f5144b78f270d408fc114 257 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 1.6E-111 T 23-04-2016 VV93_RS14915 70191408e10f5144b78f270d408fc114 257 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.256 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 VV93_RS14915 70191408e10f5144b78f270d408fc114 257 SUPERFAMILY SSF110399 1 236 4.58E-87 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 VV93_RS00205 9bd027032cf4638bb8c02f19ca8a0687 134 PANTHER PTHR40942 1 134 2.3E-63 T 23-04-2016 VV93_RS00205 9bd027032cf4638bb8c02f19ca8a0687 134 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 56 130 1.5E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS00205 9bd027032cf4638bb8c02f19ca8a0687 134 PANTHER PTHR40942:SF1 1 134 2.3E-63 T 23-04-2016 VV93_RS00205 9bd027032cf4638bb8c02f19ca8a0687 134 Gene3D G3DSA:1.10.760.10 55 132 2.2E-33 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS00205 9bd027032cf4638bb8c02f19ca8a0687 134 SUPERFAMILY SSF46626 57 131 1.13E-18 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS00205 9bd027032cf4638bb8c02f19ca8a0687 134 PRINTS PR00607 Class IE cytochrome C signature 120 131 6.9E-15 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VV93_RS00205 9bd027032cf4638bb8c02f19ca8a0687 134 PRINTS PR00607 Class IE cytochrome C signature 66 77 6.9E-15 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VV93_RS00205 9bd027032cf4638bb8c02f19ca8a0687 134 PRINTS PR00607 Class IE cytochrome C signature 77 87 6.9E-15 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VV93_RS00205 9bd027032cf4638bb8c02f19ca8a0687 134 PRINTS PR00607 Class IE cytochrome C signature 105 117 6.9E-15 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VV93_RS23055 4c049a121887feba039985fdd29f1171 265 SUPERFAMILY SSF51261 111 229 1.1E-16 T 23-04-2016 IPR011055 Duplicated hybrid motif VV93_RS23055 4c049a121887feba039985fdd29f1171 265 Gene3D G3DSA:2.70.70.10 100 256 1.6E-19 T 23-04-2016 VV93_RS23055 4c049a121887feba039985fdd29f1171 265 Pfam PF01551 Peptidase family M23 135 227 4.0E-11 T 23-04-2016 IPR016047 Peptidase M23 VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.0E-57 T 23-04-2016 VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 Gene3D G3DSA:2.40.30.10 212 298 8.5E-36 T 23-04-2016 VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.521 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 SUPERFAMILY SSF50447 205 301 3.14E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 SUPERFAMILY SSF50465 298 393 2.19E-35 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 PANTHER PTHR23115:SF151 1 392 3.2E-287 T 23-04-2016 VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 Gene3D G3DSA:2.40.30.10 300 392 7.7E-47 T 23-04-2016 VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 6.0E-17 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 6.4E-14 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 4.4E-33 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 PANTHER PTHR23115 1 392 3.2E-287 T 23-04-2016 VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 8.1E-231 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 Gene3D G3DSA:3.40.50.300 4 211 5.3E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 SUPERFAMILY SSF52540 6 219 3.89E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.0E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.0E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.0E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.0E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS14690 34d2e8ce305ab543a684dd2789b7bbc5 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.0E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 Pfam PF04539 Sigma-70 region 3 101 171 3.3E-12 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 SUPERFAMILY SSF88659 161 239 1.25E-19 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 SUPERFAMILY SSF88946 6 91 2.75E-24 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 PIRSF PIRSF000770 3 243 1.9E-37 T 23-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 Gene3D G3DSA:1.10.10.10 175 238 3.3E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 240 63.819 T 23-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 PANTHER PTHR30385:SF7 5 244 2.5E-72 T 23-04-2016 VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 Pfam PF04542 Sigma-70 region 2 19 91 5.4E-17 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 2.1E-11 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 2.1E-11 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 2.1E-11 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 2.1E-11 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 237 3.9E-31 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 Gene3D G3DSA:1.10.601.10 17 86 4.9E-17 T 23-04-2016 VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 PANTHER PTHR30385 5 244 2.5E-72 T 23-04-2016 VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 SUPERFAMILY SSF88659 92 159 1.09E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 19 238 3.1E-84 T 23-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 Pfam PF04545 Sigma-70, region 4 187 234 3.0E-17 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS10950 19c20735a79bb1141cb020bddb97b963 244 Gene3D G3DSA:1.10.10.10 91 138 3.9E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS08830 9acfd7a767afe3d67080be6afcb6d5e9 371 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 131 2.4E-31 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VV93_RS08830 9acfd7a767afe3d67080be6afcb6d5e9 371 SUPERFAMILY SSF47188 3 131 4.06E-27 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VV93_RS08830 9acfd7a767afe3d67080be6afcb6d5e9 371 PANTHER PTHR10799 239 364 1.5E-28 T 23-04-2016 VV93_RS08830 9acfd7a767afe3d67080be6afcb6d5e9 371 PANTHER PTHR10799:SF750 239 364 1.5E-28 T 23-04-2016 VV93_RS08830 9acfd7a767afe3d67080be6afcb6d5e9 371 Gene3D G3DSA:1.20.120.50 3 131 1.3E-29 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VV93_RS08830 9acfd7a767afe3d67080be6afcb6d5e9 371 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 366 2.3E-46 T 23-04-2016 IPR000160 GGDEF domain VV93_RS08830 9acfd7a767afe3d67080be6afcb6d5e9 371 SMART SM00267 195 367 1.1E-49 T 23-04-2016 IPR000160 GGDEF domain VV93_RS08830 9acfd7a767afe3d67080be6afcb6d5e9 371 Gene3D G3DSA:3.30.70.270 207 368 4.3E-45 T 23-04-2016 VV93_RS08830 9acfd7a767afe3d67080be6afcb6d5e9 371 ProSitePatterns PS00550 Hemerythrin family signature. 59 84 - T 23-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 VV93_RS08830 9acfd7a767afe3d67080be6afcb6d5e9 371 Pfam PF01814 Hemerythrin HHE cation binding domain 13 128 8.1E-9 T 23-04-2016 IPR012312 Haemerythrin-like VV93_RS08830 9acfd7a767afe3d67080be6afcb6d5e9 371 SUPERFAMILY SSF55073 211 365 1.41E-43 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS08830 9acfd7a767afe3d67080be6afcb6d5e9 371 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 362 6.4E-43 T 23-04-2016 IPR000160 GGDEF domain VV93_RS02770 ee7368b33e80680356de19fcea64703a 122 Gene3D G3DSA:3.40.1350.10 13 120 3.0E-34 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 VV93_RS02770 ee7368b33e80680356de19fcea64703a 122 SUPERFAMILY SSF52980 8 112 1.18E-20 T 23-04-2016 IPR011335 Restriction endonuclease type II-like VV93_RS02770 ee7368b33e80680356de19fcea64703a 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 9.1E-27 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 VV93_RS02770 ee7368b33e80680356de19fcea64703a 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 23.849 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 VV93_RS02770 ee7368b33e80680356de19fcea64703a 122 PANTHER PTHR34039 2 119 3.6E-35 T 23-04-2016 VV93_RS02770 ee7368b33e80680356de19fcea64703a 122 PANTHER PTHR34039:SF1 2 119 3.6E-35 T 23-04-2016 VV93_RS02770 ee7368b33e80680356de19fcea64703a 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 120 8.4E-35 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 VV93_RS13055 f88dd9eddd0d32af240a44f5490d777d 272 Gene3D G3DSA:1.10.3730.10 162 268 4.4E-30 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VV93_RS13055 f88dd9eddd0d32af240a44f5490d777d 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.296 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VV93_RS13055 f88dd9eddd0d32af240a44f5490d777d 272 Gene3D G3DSA:3.40.50.720 2 160 5.5E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS13055 f88dd9eddd0d32af240a44f5490d777d 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VV93_RS13055 f88dd9eddd0d32af240a44f5490d777d 272 SUPERFAMILY SSF48179 162 270 1.07E-30 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VV93_RS13055 f88dd9eddd0d32af240a44f5490d777d 272 SUPERFAMILY SSF51735 4 161 3.85E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS13055 f88dd9eddd0d32af240a44f5490d777d 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 6.3E-30 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VV93_RS13055 f88dd9eddd0d32af240a44f5490d777d 272 PIRSF PIRSF000193 3 270 1.3E-75 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VV93_RS13055 f88dd9eddd0d32af240a44f5490d777d 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 1.4E-72 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VV93_RS13055 f88dd9eddd0d32af240a44f5490d777d 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 99 5.9E-25 T 23-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal VV93_RS13055 f88dd9eddd0d32af240a44f5490d777d 272 PANTHER PTHR11645 1 270 5.6E-108 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VV93_RS13055 f88dd9eddd0d32af240a44f5490d777d 272 PANTHER PTHR11645:SF0 1 270 5.6E-108 T 23-04-2016 VV93_RS10785 2e122eb75c08a3830845b1f033121461 672 PANTHER PTHR13847 607 669 3.2E-144 T 23-04-2016 VV93_RS10785 2e122eb75c08a3830845b1f033121461 672 PANTHER PTHR13847 224 588 3.2E-144 T 23-04-2016 VV93_RS10785 2e122eb75c08a3830845b1f033121461 672 PANTHER PTHR13847:SF182 607 669 3.2E-144 T 23-04-2016 VV93_RS10785 2e122eb75c08a3830845b1f033121461 672 PANTHER PTHR13847:SF182 224 588 3.2E-144 T 23-04-2016 VV93_RS10785 2e122eb75c08a3830845b1f033121461 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 4.7E-45 T 23-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 VV93_RS10785 2e122eb75c08a3830845b1f033121461 672 Pfam PF01266 FAD dependent oxidoreductase 266 636 7.2E-44 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VV93_RS10785 2e122eb75c08a3830845b1f033121461 672 Gene3D G3DSA:3.50.50.60 395 480 4.1E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS10785 2e122eb75c08a3830845b1f033121461 672 Gene3D G3DSA:3.50.50.60 574 647 4.1E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS10785 2e122eb75c08a3830845b1f033121461 672 Gene3D G3DSA:3.50.50.60 266 335 4.1E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS10785 2e122eb75c08a3830845b1f033121461 672 SUPERFAMILY SSF51905 266 481 3.04E-26 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS10785 2e122eb75c08a3830845b1f033121461 672 SUPERFAMILY SSF51905 574 663 3.04E-26 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS10785 2e122eb75c08a3830845b1f033121461 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 666 8.4E-155 T 23-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 VV93_RS10785 2e122eb75c08a3830845b1f033121461 672 Gene3D G3DSA:3.40.50.150 9 251 1.4E-101 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS10785 2e122eb75c08a3830845b1f033121461 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 661 27.689 T 23-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 VV93_RS13355 c3bc284eb0f99770e1d5da629bddef54 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 7.5E-68 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 VV93_RS13355 c3bc284eb0f99770e1d5da629bddef54 366 PANTHER PTHR33529:SF2 2 366 3.9E-111 T 23-04-2016 VV93_RS13355 c3bc284eb0f99770e1d5da629bddef54 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 1.7E-116 T 23-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 VV93_RS13355 c3bc284eb0f99770e1d5da629bddef54 366 PANTHER PTHR33529 2 366 3.9E-111 T 23-04-2016 VV93_RS11425 2fdb0eb0b60f7bd55d38061cbdf4e589 150 SUPERFAMILY SSF54637 7 146 5.89E-49 T 23-04-2016 IPR029069 HotDog domain VV93_RS11425 2fdb0eb0b60f7bd55d38061cbdf4e589 150 PANTHER PTHR30272 1 150 1.8E-82 T 23-04-2016 VV93_RS11425 2fdb0eb0b60f7bd55d38061cbdf4e589 150 Pfam PF07977 FabA-like domain 17 141 1.6E-39 T 23-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VV93_RS11425 2fdb0eb0b60f7bd55d38061cbdf4e589 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.549 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VV93_RS11425 2fdb0eb0b60f7bd55d38061cbdf4e589 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 5.9E-60 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VV93_RS11425 2fdb0eb0b60f7bd55d38061cbdf4e589 150 Gene3D G3DSA:3.10.129.10 3 147 2.2E-57 T 23-04-2016 IPR029069 HotDog domain VV93_RS06110 8860b021f2ef508b0f3f724db03f2edc 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 2.6E-54 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 VV93_RS06110 8860b021f2ef508b0f3f724db03f2edc 194 SUPERFAMILY SSF52972 2 186 8.5E-58 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VV93_RS06110 8860b021f2ef508b0f3f724db03f2edc 194 PANTHER PTHR11746:SF102 124 190 2.6E-31 T 23-04-2016 VV93_RS06110 8860b021f2ef508b0f3f724db03f2edc 194 PANTHER PTHR11746 124 190 2.6E-31 T 23-04-2016 VV93_RS06110 8860b021f2ef508b0f3f724db03f2edc 194 Pfam PF02545 Maf-like protein 5 187 7.7E-47 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 VV93_RS06110 8860b021f2ef508b0f3f724db03f2edc 194 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 29.856 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 VV93_RS06110 8860b021f2ef508b0f3f724db03f2edc 194 PIRSF PIRSF006305 1 192 1.6E-45 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 VV93_RS06110 8860b021f2ef508b0f3f724db03f2edc 194 Gene3D G3DSA:3.90.950.10 4 190 4.0E-57 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VV93_RS10160 178714d7f47ccf8494e1e3c9b17d0005 477 Gene3D G3DSA:3.40.605.10 4 231 2.5E-51 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VV93_RS10160 178714d7f47ccf8494e1e3c9b17d0005 477 PIRSF PIRSF036492 1 474 2.0E-149 T 23-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 VV93_RS10160 178714d7f47ccf8494e1e3c9b17d0005 477 Gene3D G3DSA:3.40.309.10 232 416 4.3E-53 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VV93_RS10160 178714d7f47ccf8494e1e3c9b17d0005 477 PANTHER PTHR11699 29 469 8.4E-139 T 23-04-2016 VV93_RS10160 178714d7f47ccf8494e1e3c9b17d0005 477 Pfam PF00171 Aldehyde dehydrogenase family 4 439 4.7E-85 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VV93_RS10160 178714d7f47ccf8494e1e3c9b17d0005 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 217 224 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VV93_RS10160 178714d7f47ccf8494e1e3c9b17d0005 477 SUPERFAMILY SSF53720 4 465 4.84E-112 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VV93_RS04960 9f2ce4805bf1dce668f3b122d06ca71c 142 PANTHER PTHR23089:SF13 34 133 1.5E-17 T 23-04-2016 VV93_RS04960 9f2ce4805bf1dce668f3b122d06ca71c 142 Pfam PF01230 HIT domain 11 99 2.4E-19 T 23-04-2016 IPR001310 Histidine triad (HIT) protein VV93_RS04960 9f2ce4805bf1dce668f3b122d06ca71c 142 PANTHER PTHR23089 34 133 1.5E-17 T 23-04-2016 IPR001310 Histidine triad (HIT) protein VV93_RS04960 9f2ce4805bf1dce668f3b122d06ca71c 142 PIRSF PIRSF000714 2 141 6.1E-54 T 23-04-2016 IPR026026 Histidine triad hydrolase, Hint-type VV93_RS04960 9f2ce4805bf1dce668f3b122d06ca71c 142 Gene3D G3DSA:3.30.428.10 2 134 1.1E-37 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 VV93_RS04960 9f2ce4805bf1dce668f3b122d06ca71c 142 SUPERFAMILY SSF54197 3 133 2.34E-34 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 VV93_RS10335 306aee2a6d08a8a5b0ad024239a56433 705 SUPERFAMILY SSF58104 396 705 6.54E-73 T 23-04-2016 VV93_RS10335 306aee2a6d08a8a5b0ad024239a56433 705 PANTHER PTHR32089 102 705 1.9E-168 T 23-04-2016 VV93_RS10335 306aee2a6d08a8a5b0ad024239a56433 705 Gene3D G3DSA:3.30.450.20 205 339 9.7E-9 T 23-04-2016 VV93_RS10335 306aee2a6d08a8a5b0ad024239a56433 705 SMART SM00304 374 428 4.4E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS10335 306aee2a6d08a8a5b0ad024239a56433 705 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 489 703 8.5E-46 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS10335 306aee2a6d08a8a5b0ad024239a56433 705 SMART SM00283 443 704 6.6E-64 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS10335 306aee2a6d08a8a5b0ad024239a56433 705 Gene3D G3DSA:1.10.287.950 458 674 1.8E-53 T 23-04-2016 VV93_RS10335 306aee2a6d08a8a5b0ad024239a56433 705 Pfam PF00672 HAMP domain 355 425 8.7E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS10335 306aee2a6d08a8a5b0ad024239a56433 705 Pfam PF02743 Cache domain 50 324 2.0E-14 T 23-04-2016 IPR033479 Double Cache domain 1 VV93_RS10335 306aee2a6d08a8a5b0ad024239a56433 705 PANTHER PTHR32089:SF34 102 705 1.9E-168 T 23-04-2016 VV93_RS02350 e41dd8658e7ece2ded71ee640962ac2a 348 SUPERFAMILY SSF53756 1 306 5.5E-13 T 23-04-2016 VV93_RS02350 e41dd8658e7ece2ded71ee640962ac2a 348 Gene3D G3DSA:3.40.50.2000 235 306 3.5E-4 T 23-04-2016 VV93_RS02350 e41dd8658e7ece2ded71ee640962ac2a 348 Pfam PF13528 Glycosyl transferase family 1 1 300 3.8E-44 T 23-04-2016 VV93_RS02350 e41dd8658e7ece2ded71ee640962ac2a 348 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 310 6.1E-99 T 23-04-2016 IPR005262 Conserved hypothetical protein CHP00661 KEGG: 00540+2.4.-.- VV93_RS09330 d6289a0fb9e029e9ea59cb1a78de6a76 195 PANTHER PTHR11845 4 142 1.6E-27 T 23-04-2016 VV93_RS09330 d6289a0fb9e029e9ea59cb1a78de6a76 195 Gene3D G3DSA:1.10.3210.10 2 183 2.1E-39 T 23-04-2016 IPR006674 HD domain VV93_RS09330 d6289a0fb9e029e9ea59cb1a78de6a76 195 Pfam PF13023 HD domain 15 170 2.2E-52 T 23-04-2016 IPR006674 HD domain VV93_RS09330 d6289a0fb9e029e9ea59cb1a78de6a76 195 SUPERFAMILY SSF109604 4 184 7.14E-44 T 23-04-2016 VV93_RS12390 463e481e4375f3445f2cef6d8169cfdc 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 419 466 5.9E-9 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12390 463e481e4375f3445f2cef6d8169cfdc 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12390 463e481e4375f3445f2cef6d8169cfdc 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12390 463e481e4375f3445f2cef6d8169cfdc 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12390 463e481e4375f3445f2cef6d8169cfdc 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12390 463e481e4375f3445f2cef6d8169cfdc 470 Gene3D G3DSA:3.40.120.10 256 382 1.9E-35 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12390 463e481e4375f3445f2cef6d8169cfdc 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 4.8E-24 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12390 463e481e4375f3445f2cef6d8169cfdc 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 4.0E-26 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12390 463e481e4375f3445f2cef6d8169cfdc 470 SUPERFAMILY SSF55957 373 459 2.62E-17 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12390 463e481e4375f3445f2cef6d8169cfdc 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 136 2.8E-37 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12390 463e481e4375f3445f2cef6d8169cfdc 470 SUPERFAMILY SSF53738 250 379 2.67E-30 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12390 463e481e4375f3445f2cef6d8169cfdc 470 SUPERFAMILY SSF53738 2 187 4.32E-40 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12390 463e481e4375f3445f2cef6d8169cfdc 470 PANTHER PTHR22573 1 468 5.5E-128 T 23-04-2016 VV93_RS12390 463e481e4375f3445f2cef6d8169cfdc 470 PANTHER PTHR22573:SF2 1 468 5.5E-128 T 23-04-2016 VV93_RS12390 463e481e4375f3445f2cef6d8169cfdc 470 Gene3D G3DSA:3.30.310.50 383 468 7.0E-17 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12390 463e481e4375f3445f2cef6d8169cfdc 470 Gene3D G3DSA:3.40.120.10 2 179 7.0E-47 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12390 463e481e4375f3445f2cef6d8169cfdc 470 Gene3D G3DSA:3.40.120.10 181 255 1.6E-23 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS11905 b7e4592c1979702d589a3eb5680d4157 150 Pfam PF04074 Domain of unknown function (DUF386) 3 140 1.0E-25 T 23-04-2016 IPR004375 YhcH/YjgK/YiaL family VV93_RS11905 b7e4592c1979702d589a3eb5680d4157 150 SUPERFAMILY SSF51197 1 143 1.46E-24 T 23-04-2016 VV93_RS11905 b7e4592c1979702d589a3eb5680d4157 150 Gene3D G3DSA:2.60.120.370 4 142 5.6E-15 T 23-04-2016 IPR004375 YhcH/YjgK/YiaL family VV93_RS01570 1668972778b49aad98faea32b32c4013 381 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 30 378 2.6E-81 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VV93_RS01570 1668972778b49aad98faea32b32c4013 381 PANTHER PTHR30244:SF16 11 376 1.8E-121 T 23-04-2016 VV93_RS01570 1668972778b49aad98faea32b32c4013 381 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 20 376 1.2E-164 T 23-04-2016 IPR026385 Aminotransferase, LLPSF_NHT_00031 family VV93_RS01570 1668972778b49aad98faea32b32c4013 381 PIRSF PIRSF000390 15 379 6.9E-87 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VV93_RS01570 1668972778b49aad98faea32b32c4013 381 Gene3D G3DSA:3.40.640.10 19 275 1.0E-82 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS01570 1668972778b49aad98faea32b32c4013 381 Gene3D G3DSA:3.90.1150.10 277 378 2.4E-26 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS01570 1668972778b49aad98faea32b32c4013 381 SUPERFAMILY SSF53383 19 378 1.53E-91 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS01570 1668972778b49aad98faea32b32c4013 381 PANTHER PTHR30244 11 376 1.8E-121 T 23-04-2016 VV93_RS02965 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 SUPERFAMILY SSF52172 2 123 1.29E-35 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS02965 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 SUPERFAMILY SSF46894 137 233 1.81E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV93_RS02965 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 PANTHER PTHR26402:SF586 4 237 5.1E-150 T 23-04-2016 VV93_RS02965 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 232 4.0E-17 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS02965 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 SMART SM00862 156 232 1.4E-13 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS02965 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 Gene3D G3DSA:3.40.50.2300 2 124 4.5E-36 T 23-04-2016 VV93_RS02965 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 SMART SM00448 4 114 1.6E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS02965 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 Pfam PF00072 Response regulator receiver domain 6 113 9.8E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS02965 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 Gene3D G3DSA:1.10.10.10 134 233 2.8E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS02965 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 PANTHER PTHR26402 4 237 5.1E-150 T 23-04-2016 VV93_RS01860 1a800ece89edc1b72f82dcb50c00ee2f 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 23-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01860 1a800ece89edc1b72f82dcb50c00ee2f 179 PANTHER PTHR11994 1 178 7.8E-99 T 23-04-2016 VV93_RS01860 1a800ece89edc1b72f82dcb50c00ee2f 179 SUPERFAMILY SSF55282 4 179 9.89E-78 T 23-04-2016 IPR022803 Ribosomal protein L5 domain VV93_RS01860 1a800ece89edc1b72f82dcb50c00ee2f 179 PIRSF PIRSF002161 1 179 3.7E-64 T 23-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 VV93_RS01860 1a800ece89edc1b72f82dcb50c00ee2f 179 Pfam PF00281 Ribosomal protein L5 24 80 9.1E-29 T 23-04-2016 IPR031310 Ribosomal protein L5, N-terminal VV93_RS01860 1a800ece89edc1b72f82dcb50c00ee2f 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.904 T 23-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01860 1a800ece89edc1b72f82dcb50c00ee2f 179 Gene3D G3DSA:3.30.1440.10 2 179 4.5E-78 T 23-04-2016 IPR022803 Ribosomal protein L5 domain VV93_RS01860 1a800ece89edc1b72f82dcb50c00ee2f 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.4E-40 T 23-04-2016 IPR031309 Ribosomal protein L5, C-terminal VV93_RS00505 3a927b85d74bd30de403ff7f4e4d1888 333 PANTHER PTHR10836 1 332 1.5E-219 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS00505 3a927b85d74bd30de403ff7f4e4d1888 333 PANTHER PTHR10836:SF37 1 332 1.5E-219 T 23-04-2016 VV93_RS00505 3a927b85d74bd30de403ff7f4e4d1888 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 23-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS00505 3a927b85d74bd30de403ff7f4e4d1888 333 Gene3D G3DSA:3.40.50.720 2 160 5.2E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS00505 3a927b85d74bd30de403ff7f4e4d1888 333 PIRSF PIRSF000149 1 333 4.4E-113 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS00505 3a927b85d74bd30de403ff7f4e4d1888 333 Gene3D G3DSA:3.30.360.10 161 315 5.7E-66 T 23-04-2016 VV93_RS00505 3a927b85d74bd30de403ff7f4e4d1888 333 SMART SM00846 3 152 1.3E-67 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS00505 3a927b85d74bd30de403ff7f4e4d1888 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 3.8E-28 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS00505 3a927b85d74bd30de403ff7f4e4d1888 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 3.8E-28 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS00505 3a927b85d74bd30de403ff7f4e4d1888 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 3.8E-28 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS00505 3a927b85d74bd30de403ff7f4e4d1888 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 3.8E-28 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS00505 3a927b85d74bd30de403ff7f4e4d1888 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 3.8E-28 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS00505 3a927b85d74bd30de403ff7f4e4d1888 333 SUPERFAMILY SSF55347 152 314 8.04E-63 T 23-04-2016 VV93_RS00505 3a927b85d74bd30de403ff7f4e4d1888 333 SUPERFAMILY SSF51735 1 180 5.11E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS00505 3a927b85d74bd30de403ff7f4e4d1888 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 1.9E-58 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS00505 3a927b85d74bd30de403ff7f4e4d1888 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 152 8.4E-51 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS00505 3a927b85d74bd30de403ff7f4e4d1888 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 4.3E-119 T 23-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS10560 9eb85bad78c97cc515e0b96b5d90ca32 328 SUPERFAMILY SSF55073 165 326 5.1E-40 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS10560 9eb85bad78c97cc515e0b96b5d90ca32 328 Gene3D G3DSA:3.30.450.20 25 140 1.0E-8 T 23-04-2016 VV93_RS10560 9eb85bad78c97cc515e0b96b5d90ca32 328 Pfam PF00990 Diguanylate cyclase, GGDEF domain 162 321 2.4E-41 T 23-04-2016 IPR000160 GGDEF domain VV93_RS10560 9eb85bad78c97cc515e0b96b5d90ca32 328 SUPERFAMILY SSF55785 23 103 2.66E-7 T 23-04-2016 IPR000014 PAS domain VV93_RS10560 9eb85bad78c97cc515e0b96b5d90ca32 328 PANTHER PTHR10799:SF750 193 328 7.8E-21 T 23-04-2016 VV93_RS10560 9eb85bad78c97cc515e0b96b5d90ca32 328 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 156 324 2.8E-38 T 23-04-2016 IPR000160 GGDEF domain VV93_RS10560 9eb85bad78c97cc515e0b96b5d90ca32 328 Gene3D G3DSA:3.30.70.270 163 326 1.2E-42 T 23-04-2016 VV93_RS10560 9eb85bad78c97cc515e0b96b5d90ca32 328 PANTHER PTHR10799 193 328 7.8E-21 T 23-04-2016 VV93_RS10560 9eb85bad78c97cc515e0b96b5d90ca32 328 SMART SM00267 149 326 1.2E-46 T 23-04-2016 IPR000160 GGDEF domain VV93_RS10560 9eb85bad78c97cc515e0b96b5d90ca32 328 Pfam PF08448 PAS fold 28 141 2.8E-7 T 23-04-2016 IPR013656 PAS fold-4 VV93_RS06080 93009256848c7c83f62d0fa4d20cc269 702 PANTHER PTHR30441 1 702 2.2E-201 T 23-04-2016 VV93_RS06080 93009256848c7c83f62d0fa4d20cc269 702 Pfam PF05170 AsmA family 1 593 4.2E-123 T 23-04-2016 IPR007844 AsmA VV93_RS06080 93009256848c7c83f62d0fa4d20cc269 702 PANTHER PTHR30441:SF4 1 702 2.2E-201 T 23-04-2016 VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 Pfam PF02954 Bacterial regulatory protein, Fis family 428 468 6.1E-16 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 Gene3D G3DSA:3.40.50.300 140 315 1.1E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 Pfam PF00072 Response regulator receiver domain 6 115 5.2E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 Pfam PF00158 Sigma-54 interaction domain 143 309 2.7E-71 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 PANTHER PTHR32071 6 468 5.4E-239 T 23-04-2016 VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 Gene3D G3DSA:1.10.8.60 316 392 8.7E-22 T 23-04-2016 VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 PANTHER PTHR32071:SF15 6 468 5.4E-239 T 23-04-2016 VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 468 1.8E-239 T 23-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 SMART SM00382 163 306 1.1E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 SUPERFAMILY SSF52172 2 188 4.41E-44 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 SUPERFAMILY SSF52540 142 386 4.19E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 Gene3D G3DSA:1.10.10.60 402 468 9.0E-21 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 Gene3D G3DSA:3.40.50.2300 3 127 1.2E-35 T 23-04-2016 VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 SUPERFAMILY SSF46689 383 468 9.68E-20 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 451 469 2.4E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 451 2.4E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VV93_RS00980 1c91ce3b4bb257bbc4531e227cec425f 469 SMART SM00448 4 115 5.7E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS11080 01b8662458cd39ea5621531dfab606e6 376 Gene3D G3DSA:1.20.1330.10 54 171 2.0E-57 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS11080 01b8662458cd39ea5621531dfab606e6 376 Gene3D G3DSA:1.20.1330.10 278 331 2.0E-57 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS11080 01b8662458cd39ea5621531dfab606e6 376 PANTHER PTHR30244:SF1 2 375 7.6E-155 T 23-04-2016 VV93_RS11080 01b8662458cd39ea5621531dfab606e6 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 4.2E-26 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS11080 01b8662458cd39ea5621531dfab606e6 376 PANTHER PTHR30244 2 375 7.6E-155 T 23-04-2016 VV93_RS11080 01b8662458cd39ea5621531dfab606e6 376 SUPERFAMILY SSF64518 1 375 5.23E-96 T 23-04-2016 VV93_RS11080 01b8662458cd39ea5621531dfab606e6 376 Pfam PF07196 Flagellin hook IN motif 193 248 1.3E-11 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VV93_RS11080 01b8662458cd39ea5621531dfab606e6 376 PRINTS PR00207 Flagellin signature 76 95 3.4E-26 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV93_RS11080 01b8662458cd39ea5621531dfab606e6 376 PRINTS PR00207 Flagellin signature 37 54 3.4E-26 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV93_RS11080 01b8662458cd39ea5621531dfab606e6 376 PRINTS PR00207 Flagellin signature 111 134 3.4E-26 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV93_RS11080 01b8662458cd39ea5621531dfab606e6 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.4E-42 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS06750 d7c752a4b5479a2287c7da3baa47a720 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 53 8.4E-5 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VV93_RS06750 d7c752a4b5479a2287c7da3baa47a720 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 125 144 8.4E-5 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VV93_RS06750 d7c752a4b5479a2287c7da3baa47a720 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 8.4E-5 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VV93_RS06750 d7c752a4b5479a2287c7da3baa47a720 347 Gene3D G3DSA:3.40.50.80 119 245 8.4E-30 T 23-04-2016 VV93_RS06750 d7c752a4b5479a2287c7da3baa47a720 347 Pfam PF00970 Oxidoreductase FAD-binding domain 17 108 5.6E-15 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain VV93_RS06750 d7c752a4b5479a2287c7da3baa47a720 347 Pfam PF00175 Oxidoreductase NAD-binding domain 126 229 4.1E-11 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VV93_RS06750 d7c752a4b5479a2287c7da3baa47a720 347 PANTHER PTHR19370 10 267 6.4E-67 T 23-04-2016 VV93_RS06750 d7c752a4b5479a2287c7da3baa47a720 347 PANTHER PTHR19370:SF89 10 267 6.4E-67 T 23-04-2016 VV93_RS06750 d7c752a4b5479a2287c7da3baa47a720 347 SUPERFAMILY SSF54292 238 346 5.11E-25 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VV93_RS06750 d7c752a4b5479a2287c7da3baa47a720 347 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 271 337 5.5E-12 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VV93_RS06750 d7c752a4b5479a2287c7da3baa47a720 347 Gene3D G3DSA:3.10.20.30 246 345 2.1E-26 T 23-04-2016 IPR012675 Beta-grasp domain VV93_RS06750 d7c752a4b5479a2287c7da3baa47a720 347 SUPERFAMILY SSF52343 119 250 6.68E-32 T 23-04-2016 VV93_RS06750 d7c752a4b5479a2287c7da3baa47a720 347 SUPERFAMILY SSF63380 4 110 3.57E-26 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VV93_RS06750 d7c752a4b5479a2287c7da3baa47a720 347 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 296 304 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VV93_RS06750 d7c752a4b5479a2287c7da3baa47a720 347 Gene3D G3DSA:2.40.30.10 12 106 2.2E-24 T 23-04-2016 VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 Gene3D G3DSA:3.40.50.920 706 885 8.3E-74 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 Gene3D G3DSA:3.40.50.970 55 469 2.6E-152 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 SUPERFAMILY SSF52922 701 885 1.04E-57 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 PANTHER PTHR11624 480 535 0.0 T 23-04-2016 IPR033247 Transketolase family VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 PANTHER PTHR11624 553 767 0.0 T 23-04-2016 IPR033247 Transketolase family VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 PANTHER PTHR11624 361 450 0.0 T 23-04-2016 IPR033247 Transketolase family VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 PANTHER PTHR11624 73 292 0.0 T 23-04-2016 IPR033247 Transketolase family VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 PANTHER PTHR11624 786 868 0.0 T 23-04-2016 IPR033247 Transketolase family VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 PANTHER PTHR11624:SF67 480 535 0.0 T 23-04-2016 VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 PANTHER PTHR11624:SF67 553 767 0.0 T 23-04-2016 VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 PANTHER PTHR11624:SF67 361 450 0.0 T 23-04-2016 VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 PANTHER PTHR11624:SF67 73 292 0.0 T 23-04-2016 VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 PANTHER PTHR11624:SF67 786 868 0.0 T 23-04-2016 VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 PIRSF PIRSF000156 1 886 0.0 T 23-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 298 2.9E-10 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 360 426 1.8E-4 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 885 0.0 T 23-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 SUPERFAMILY SSF52518 56 469 6.53E-140 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 SUPERFAMILY SSF52518 475 700 1.65E-97 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS12535 7e9b988d4e412851309f7e2813457dd8 886 Gene3D G3DSA:3.40.50.970 473 704 7.4E-121 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS11350 463e0721eaced24f9d09cce399e87232 243 PANTHER PTHR30231 11 242 2.5E-122 T 23-04-2016 VV93_RS11350 463e0721eaced24f9d09cce399e87232 243 Pfam PF00929 Exonuclease 13 180 5.2E-38 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VV93_RS11350 463e0721eaced24f9d09cce399e87232 243 SUPERFAMILY SSF53098 10 190 2.05E-53 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS11350 463e0721eaced24f9d09cce399e87232 243 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 243 6.3E-98 T 23-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS11350 463e0721eaced24f9d09cce399e87232 243 Gene3D G3DSA:3.30.420.10 8 191 7.0E-64 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS11350 463e0721eaced24f9d09cce399e87232 243 PANTHER PTHR30231:SF0 11 242 2.5E-122 T 23-04-2016 VV93_RS11350 463e0721eaced24f9d09cce399e87232 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 11 226 3.6E-80 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS11350 463e0721eaced24f9d09cce399e87232 243 SMART SM00479 11 189 6.1E-52 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VV93_RS09185 4b78ab2f485bd3fc623cbb83d634b51e 471 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 22 471 1.2E-156 T 23-04-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 VV93_RS09185 4b78ab2f485bd3fc623cbb83d634b51e 471 Pfam PF02397 Bacterial sugar transferase 281 463 4.7E-56 T 23-04-2016 IPR003362 Bacterial sugar transferase VV93_RS09185 4b78ab2f485bd3fc623cbb83d634b51e 471 SUPERFAMILY SSF51735 145 272 5.31E-8 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS09185 4b78ab2f485bd3fc623cbb83d634b51e 471 Pfam PF13727 CoA-binding domain 62 245 1.2E-29 T 23-04-2016 VV93_RS09185 4b78ab2f485bd3fc623cbb83d634b51e 471 PANTHER PTHR30576:SF0 20 471 1.8E-149 T 23-04-2016 VV93_RS09185 4b78ab2f485bd3fc623cbb83d634b51e 471 PANTHER PTHR30576 20 471 1.8E-149 T 23-04-2016 VV93_RS09185 4b78ab2f485bd3fc623cbb83d634b51e 471 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 21 471 1.1E-140 T 23-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase VV93_RS04040 7a8094bc5935cce9cb393cf7c74916da 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 39.396 T 23-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VV93_RS04040 7a8094bc5935cce9cb393cf7c74916da 416 SUPERFAMILY SSF53720 6 408 1.83E-113 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VV93_RS04040 7a8094bc5935cce9cb393cf7c74916da 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 23-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VV93_RS04040 7a8094bc5935cce9cb393cf7c74916da 416 PANTHER PTHR11063:SF8 1 411 2.4E-176 T 23-04-2016 VV93_RS04040 7a8094bc5935cce9cb393cf7c74916da 416 Gene3D G3DSA:3.40.309.10 224 373 2.1E-34 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VV93_RS04040 7a8094bc5935cce9cb393cf7c74916da 416 PANTHER PTHR11063 1 411 2.4E-176 T 23-04-2016 VV93_RS04040 7a8094bc5935cce9cb393cf7c74916da 416 Pfam PF00171 Aldehyde dehydrogenase family 8 278 7.2E-16 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VV93_RS04040 7a8094bc5935cce9cb393cf7c74916da 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 405 1.1E-167 T 23-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VV93_RS04040 7a8094bc5935cce9cb393cf7c74916da 416 Gene3D G3DSA:3.40.605.10 5 221 4.4E-100 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VV93_RS04040 7a8094bc5935cce9cb393cf7c74916da 416 Gene3D G3DSA:3.40.605.10 374 412 4.4E-100 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VV93_RS04040 7a8094bc5935cce9cb393cf7c74916da 416 PIRSF PIRSF000151 2 416 2.3E-165 T 23-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VV93_RS08245 a06d67a0b05478f15ac86bad3ba052b8 288 PIRSF PIRSF006221 1 288 7.2E-108 T 23-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase VV93_RS08245 a06d67a0b05478f15ac86bad3ba052b8 288 PANTHER PTHR12149:SF8 1 286 1.4E-99 T 23-04-2016 VV93_RS08245 a06d67a0b05478f15ac86bad3ba052b8 288 SUPERFAMILY SSF56112 4 278 7.81E-40 T 23-04-2016 IPR011009 Protein kinase-like domain VV93_RS08245 a06d67a0b05478f15ac86bad3ba052b8 288 Gene3D G3DSA:3.90.1200.10 100 248 2.3E-7 T 23-04-2016 VV93_RS08245 a06d67a0b05478f15ac86bad3ba052b8 288 PANTHER PTHR12149 1 286 1.4E-99 T 23-04-2016 VV93_RS08245 a06d67a0b05478f15ac86bad3ba052b8 288 Pfam PF03881 Fructosamine kinase 1 287 4.5E-122 T 23-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase VV93_RS13590 8a3ebef9b6656fef1124b5f9081a897d 290 PANTHER PTHR22572 4 277 6.2E-101 T 23-04-2016 VV93_RS13590 8a3ebef9b6656fef1124b5f9081a897d 290 SUPERFAMILY SSF53448 2 271 1.38E-64 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS13590 8a3ebef9b6656fef1124b5f9081a897d 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 7.0E-124 T 23-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 VV93_RS13590 8a3ebef9b6656fef1124b5f9081a897d 290 PANTHER PTHR22572:SF14 4 277 6.2E-101 T 23-04-2016 VV93_RS13590 8a3ebef9b6656fef1124b5f9081a897d 290 Gene3D G3DSA:3.90.550.10 3 269 3.6E-67 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS13590 8a3ebef9b6656fef1124b5f9081a897d 290 Pfam PF00483 Nucleotidyl transferase 9 265 3.1E-32 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VV93_RS08445 fa6754706fd8c54d701ee5dd4ce7547c 135 PANTHER PTHR22769:SF17 9 113 6.5E-14 T 23-04-2016 VV93_RS08445 fa6754706fd8c54d701ee5dd4ce7547c 135 SUPERFAMILY SSF55811 9 134 4.6E-22 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS08445 fa6754706fd8c54d701ee5dd4ce7547c 135 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VV93_RS08445 fa6754706fd8c54d701ee5dd4ce7547c 135 Pfam PF00293 NUDIX domain 14 117 1.2E-11 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VV93_RS08445 fa6754706fd8c54d701ee5dd4ce7547c 135 PRINTS PR00502 NUDIX hydrolase family signature 48 63 3.1E-6 T 23-04-2016 IPR020476 NUDIX hydrolase VV93_RS08445 fa6754706fd8c54d701ee5dd4ce7547c 135 PRINTS PR00502 NUDIX hydrolase family signature 34 48 3.1E-6 T 23-04-2016 IPR020476 NUDIX hydrolase VV93_RS08445 fa6754706fd8c54d701ee5dd4ce7547c 135 PANTHER PTHR22769 9 113 6.5E-14 T 23-04-2016 VV93_RS08445 fa6754706fd8c54d701ee5dd4ce7547c 135 Gene3D G3DSA:3.90.79.10 9 130 1.7E-19 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS06440 654056fc1bb02bac64f03062b2160b52 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 5.9E-18 T 23-04-2016 IPR000362 Fumarate lyase family VV93_RS06440 654056fc1bb02bac64f03062b2160b52 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 5.9E-18 T 23-04-2016 IPR000362 Fumarate lyase family VV93_RS06440 654056fc1bb02bac64f03062b2160b52 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 5.9E-18 T 23-04-2016 IPR000362 Fumarate lyase family VV93_RS06440 654056fc1bb02bac64f03062b2160b52 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 5.9E-18 T 23-04-2016 IPR000362 Fumarate lyase family VV93_RS06440 654056fc1bb02bac64f03062b2160b52 456 Gene3D G3DSA:1.10.40.30 391 446 4.5E-34 T 23-04-2016 VV93_RS06440 654056fc1bb02bac64f03062b2160b52 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 6.5E-151 T 23-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 VV93_RS06440 654056fc1bb02bac64f03062b2160b52 456 PANTHER PTHR11444 4 456 0.0 T 23-04-2016 IPR000362 Fumarate lyase family VV93_RS06440 654056fc1bb02bac64f03062b2160b52 456 PANTHER PTHR11444:SF17 4 456 0.0 T 23-04-2016 VV93_RS06440 654056fc1bb02bac64f03062b2160b52 456 SUPERFAMILY SSF48557 4 448 8.48E-109 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 VV93_RS06440 654056fc1bb02bac64f03062b2160b52 456 Gene3D G3DSA:1.10.275.10 1 119 5.6E-49 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal VV93_RS06440 654056fc1bb02bac64f03062b2160b52 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VV93_RS06440 654056fc1bb02bac64f03062b2160b52 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 2.5E-52 T 23-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 VV93_RS06440 654056fc1bb02bac64f03062b2160b52 456 Gene3D G3DSA:1.20.200.10 120 390 5.7E-89 T 23-04-2016 VV93_RS06440 654056fc1bb02bac64f03062b2160b52 456 Pfam PF00206 Lyase 14 313 2.0E-74 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal VV93_RS07785 9ef8e54245bcab5681db3f8cbc35e416 869 SUPERFAMILY SSF55486 203 449 9.08E-74 T 23-04-2016 VV93_RS07785 9ef8e54245bcab5681db3f8cbc35e416 869 Gene3D G3DSA:1.10.390.10 307 450 1.2E-32 T 23-04-2016 VV93_RS07785 9ef8e54245bcab5681db3f8cbc35e416 869 SUPERFAMILY SSF63737 2 192 8.76E-48 T 23-04-2016 VV93_RS07785 9ef8e54245bcab5681db3f8cbc35e416 869 PANTHER PTHR11533:SF152 10 584 0.0 T 23-04-2016 VV93_RS07785 9ef8e54245bcab5681db3f8cbc35e416 869 PANTHER PTHR11533:SF152 608 869 0.0 T 23-04-2016 VV93_RS07785 9ef8e54245bcab5681db3f8cbc35e416 869 Pfam PF11940 Domain of unknown function (DUF3458) 457 824 3.6E-132 T 23-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VV93_RS07785 9ef8e54245bcab5681db3f8cbc35e416 869 Gene3D G3DSA:1.25.50.10 545 867 1.9E-115 T 23-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VV93_RS07785 9ef8e54245bcab5681db3f8cbc35e416 869 PANTHER PTHR11533 10 584 0.0 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 VV93_RS07785 9ef8e54245bcab5681db3f8cbc35e416 869 PANTHER PTHR11533 608 869 0.0 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 VV93_RS07785 9ef8e54245bcab5681db3f8cbc35e416 869 Pfam PF01433 Peptidase family M1 36 383 2.6E-67 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VV93_RS07785 9ef8e54245bcab5681db3f8cbc35e416 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.5E-9 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VV93_RS07785 9ef8e54245bcab5681db3f8cbc35e416 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.5E-9 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VV93_RS07785 9ef8e54245bcab5681db3f8cbc35e416 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.5E-9 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VV93_RS07785 9ef8e54245bcab5681db3f8cbc35e416 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.5E-9 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VV93_RS07785 9ef8e54245bcab5681db3f8cbc35e416 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.5E-9 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VV93_RS07785 9ef8e54245bcab5681db3f8cbc35e416 869 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 23-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 VV93_RS04640 b03d4a597312b87d6ed8743043d67614 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 1.4E-50 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VV93_RS04640 b03d4a597312b87d6ed8743043d67614 169 PANTHER PTHR30175 1 118 1.7E-55 T 23-04-2016 VV93_RS04640 b03d4a597312b87d6ed8743043d67614 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VV93_RS04640 b03d4a597312b87d6ed8743043d67614 169 Gene3D G3DSA:2.70.70.10 17 165 7.7E-60 T 23-04-2016 VV93_RS04640 b03d4a597312b87d6ed8743043d67614 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 1.4E-49 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VV93_RS04640 b03d4a597312b87d6ed8743043d67614 169 SUPERFAMILY SSF51261 18 166 1.5E-55 T 23-04-2016 IPR011055 Duplicated hybrid motif VV93_RS13475 7843cd87a094cf71704982cd808a0e38 186 SUPERFAMILY SSF52972 1 184 2.09E-63 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VV93_RS13475 7843cd87a094cf71704982cd808a0e38 186 PIRSF PIRSF006305 1 186 3.0E-58 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 VV93_RS13475 7843cd87a094cf71704982cd808a0e38 186 Hamap MF_00528 Septum formation protein Maf [maf]. 3 186 29.926 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 VV93_RS13475 7843cd87a094cf71704982cd808a0e38 186 PANTHER PTHR11746 119 182 6.4E-15 T 23-04-2016 VV93_RS13475 7843cd87a094cf71704982cd808a0e38 186 Pfam PF02545 Maf-like protein 3 184 1.5E-61 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 VV93_RS13475 7843cd87a094cf71704982cd808a0e38 186 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 182 1.8E-54 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 VV93_RS13475 7843cd87a094cf71704982cd808a0e38 186 Gene3D G3DSA:3.90.950.10 2 185 1.8E-71 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VV93_RS00585 34b128d7d1f2d5da0cd9d572ff4996c7 280 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 272 5.1E-116 T 23-04-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 VV93_RS00585 34b128d7d1f2d5da0cd9d572ff4996c7 280 PANTHER PTHR22936:SF30 1 275 4.7E-81 T 23-04-2016 VV93_RS00585 34b128d7d1f2d5da0cd9d572ff4996c7 280 PANTHER PTHR22936 1 275 4.7E-81 T 23-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 VV93_RS00585 34b128d7d1f2d5da0cd9d572ff4996c7 280 Gene3D G3DSA:1.20.1540.10 97 269 9.3E-34 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VV93_RS00585 34b128d7d1f2d5da0cd9d572ff4996c7 280 Pfam PF01694 Rhomboid family 133 271 1.7E-30 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VV93_RS00585 34b128d7d1f2d5da0cd9d572ff4996c7 280 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 4.2E-34 T 23-04-2016 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 VV93_RS00585 34b128d7d1f2d5da0cd9d572ff4996c7 280 SUPERFAMILY SSF144091 96 275 6.8E-42 T 23-04-2016 VV93_RS13315 ec75250d2360d6f0c25dd6297d418531 286 Pfam PF08220 DeoR-like helix-turn-helix domain 11 63 4.7E-6 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS13315 ec75250d2360d6f0c25dd6297d418531 286 Gene3D G3DSA:1.10.10.10 7 64 2.4E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS13315 ec75250d2360d6f0c25dd6297d418531 286 ProSitePatterns PS00894 DeoR-type HTH domain signature. 11 45 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VV93_RS13315 ec75250d2360d6f0c25dd6297d418531 286 Pfam PF13280 WYL domain 117 281 1.4E-20 T 23-04-2016 IPR026881 WYL domain VV93_RS01845 be170dc137fffee7266abf9038e75abd 84 Gene3D G3DSA:2.40.50.140 6 82 9.7E-37 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS01845 be170dc137fffee7266abf9038e75abd 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 5.0E-39 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01845 be170dc137fffee7266abf9038e75abd 84 SUPERFAMILY SSF50249 6 83 5.14E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS01845 be170dc137fffee7266abf9038e75abd 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 26.287 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01845 be170dc137fffee7266abf9038e75abd 84 PANTHER PTHR10744 2 84 2.1E-43 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01845 be170dc137fffee7266abf9038e75abd 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 2.7E-38 T 23-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01845 be170dc137fffee7266abf9038e75abd 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 23-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01845 be170dc137fffee7266abf9038e75abd 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.1E-14 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01845 be170dc137fffee7266abf9038e75abd 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.1E-14 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01845 be170dc137fffee7266abf9038e75abd 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.1E-14 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01845 be170dc137fffee7266abf9038e75abd 84 Pfam PF00366 Ribosomal protein S17 10 77 1.1E-34 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS10395 cc3046027109f8b311c07d38279db41b 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.6E-107 T 23-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 VV93_RS10395 cc3046027109f8b311c07d38279db41b 246 SUPERFAMILY SSF102114 23 220 2.35E-29 T 23-04-2016 VV93_RS10395 cc3046027109f8b311c07d38279db41b 246 Pfam PF04055 Radical SAM superfamily 24 178 7.3E-32 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VV93_RS10395 cc3046027109f8b311c07d38279db41b 246 Gene3D G3DSA:3.80.30.10 69 245 8.7E-71 T 23-04-2016 VV93_RS10395 cc3046027109f8b311c07d38279db41b 246 PANTHER PTHR30352 1 246 1.4E-139 T 23-04-2016 VV93_RS10395 cc3046027109f8b311c07d38279db41b 246 PANTHER PTHR30352:SF9 1 246 1.4E-139 T 23-04-2016 VV93_RS10395 cc3046027109f8b311c07d38279db41b 246 Pfam PF13353 4Fe-4S single cluster domain 16 137 3.4E-20 T 23-04-2016 VV93_RS10395 cc3046027109f8b311c07d38279db41b 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 23-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VV93_RS05965 3de0ae36398ec23173e287959b313a24 170 Gene3D G3DSA:3.30.70.260 4 66 6.1E-5 T 23-04-2016 VV93_RS05965 3de0ae36398ec23173e287959b313a24 170 Gene3D G3DSA:3.30.70.260 85 168 7.8E-16 T 23-04-2016 VV93_RS05965 3de0ae36398ec23173e287959b313a24 170 SUPERFAMILY SSF55021 89 167 5.04E-10 T 23-04-2016 VV93_RS05965 3de0ae36398ec23173e287959b313a24 170 PANTHER PTHR34875 1 169 3.1E-23 T 23-04-2016 VV93_RS05965 3de0ae36398ec23173e287959b313a24 170 Pfam PF13740 ACT domain 5 66 4.3E-9 T 23-04-2016 VV93_RS05965 3de0ae36398ec23173e287959b313a24 170 PIRSF PIRSF028103 1 169 3.2E-42 T 23-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VV93_RS03185 24061acac679f9e1705c49acab94ba3d 242 SMART SM00448 2 112 2.6E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS03185 24061acac679f9e1705c49acab94ba3d 242 PANTHER PTHR26402:SF524 2 115 5.1E-36 T 23-04-2016 VV93_RS03185 24061acac679f9e1705c49acab94ba3d 242 SMART SM00850 145 239 6.2E-24 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 VV93_RS03185 24061acac679f9e1705c49acab94ba3d 242 Pfam PF04397 LytTr DNA-binding domain 146 238 4.6E-21 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 VV93_RS03185 24061acac679f9e1705c49acab94ba3d 242 Gene3D G3DSA:3.40.50.2300 1 120 1.3E-29 T 23-04-2016 VV93_RS03185 24061acac679f9e1705c49acab94ba3d 242 Gene3D G3DSA:2.40.50.40 137 201 9.0E-7 T 23-04-2016 VV93_RS03185 24061acac679f9e1705c49acab94ba3d 242 PANTHER PTHR26402 2 115 5.1E-36 T 23-04-2016 VV93_RS03185 24061acac679f9e1705c49acab94ba3d 242 Pfam PF00072 Response regulator receiver domain 5 112 3.7E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS03185 24061acac679f9e1705c49acab94ba3d 242 SUPERFAMILY SSF52172 1 121 2.56E-30 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS03185 24061acac679f9e1705c49acab94ba3d 242 Gene3D G3DSA:2.20.25.10 217 240 3.3E-5 T 23-04-2016 VV93_RS04690 5982b506f4c9e8b24dffc726cc15883d 307 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 23-04-2016 IPR018080 Band 7/stomatin-like, conserved site VV93_RS04690 5982b506f4c9e8b24dffc726cc15883d 307 PANTHER PTHR10264 6 307 4.8E-122 T 23-04-2016 IPR001972 Stomatin family GO:0016020 VV93_RS04690 5982b506f4c9e8b24dffc726cc15883d 307 PANTHER PTHR10264:SF27 6 307 4.8E-122 T 23-04-2016 VV93_RS04690 5982b506f4c9e8b24dffc726cc15883d 307 SMART SM00244 22 180 7.3E-60 T 23-04-2016 IPR001107 Band 7 domain VV93_RS04690 5982b506f4c9e8b24dffc726cc15883d 307 PRINTS PR00721 Stomatin signature 175 196 1.5E-28 T 23-04-2016 IPR001972 Stomatin family GO:0016020 VV93_RS04690 5982b506f4c9e8b24dffc726cc15883d 307 PRINTS PR00721 Stomatin signature 77 98 1.5E-28 T 23-04-2016 IPR001972 Stomatin family GO:0016020 VV93_RS04690 5982b506f4c9e8b24dffc726cc15883d 307 PRINTS PR00721 Stomatin signature 112 129 1.5E-28 T 23-04-2016 IPR001972 Stomatin family GO:0016020 VV93_RS04690 5982b506f4c9e8b24dffc726cc15883d 307 PRINTS PR00721 Stomatin signature 132 155 1.5E-28 T 23-04-2016 IPR001972 Stomatin family GO:0016020 VV93_RS04690 5982b506f4c9e8b24dffc726cc15883d 307 PRINTS PR00721 Stomatin signature 156 174 1.5E-28 T 23-04-2016 IPR001972 Stomatin family GO:0016020 VV93_RS04690 5982b506f4c9e8b24dffc726cc15883d 307 Pfam PF01145 SPFH domain / Band 7 family 26 195 4.2E-34 T 23-04-2016 IPR001107 Band 7 domain VV93_RS04690 5982b506f4c9e8b24dffc726cc15883d 307 SUPERFAMILY SSF117892 53 187 1.96E-41 T 23-04-2016 IPR001107 Band 7 domain VV93_RS04690 5982b506f4c9e8b24dffc726cc15883d 307 Pfam PF16200 C-terminal region of band_7 242 301 4.2E-7 T 23-04-2016 IPR032435 Band 7, C-terminal extension VV93_RS06515 c4c641344b917de1e7eaf3ac54157456 167 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 127 25.7 T 23-04-2016 IPR023006 Uncharacterised protein family UPF0225 VV93_RS06515 c4c641344b917de1e7eaf3ac54157456 167 Gene3D G3DSA:3.10.450.50 3 167 3.0E-55 T 23-04-2016 IPR032710 NTF2-like domain VV93_RS06515 c4c641344b917de1e7eaf3ac54157456 167 SUPERFAMILY SSF103642 147 167 3.6E-8 T 23-04-2016 VV93_RS06515 c4c641344b917de1e7eaf3ac54157456 167 SUPERFAMILY SSF54427 29 128 3.21E-34 T 23-04-2016 IPR032710 NTF2-like domain VV93_RS06515 c4c641344b917de1e7eaf3ac54157456 167 PANTHER PTHR33747 9 167 1.2E-32 T 23-04-2016 VV93_RS06515 c4c641344b917de1e7eaf3ac54157456 167 Pfam PF02810 SEC-C motif 4 18 5.5E-6 T 23-04-2016 IPR004027 SEC-C motif VV93_RS06515 c4c641344b917de1e7eaf3ac54157456 167 Pfam PF02810 SEC-C motif 150 167 4.2E-10 T 23-04-2016 IPR004027 SEC-C motif VV93_RS06515 c4c641344b917de1e7eaf3ac54157456 167 PANTHER PTHR33747:SF1 9 167 1.2E-32 T 23-04-2016 VV93_RS02735 d9efd21e1f7348f6ff1f27d707d5993e 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 7.9E-75 T 23-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VV93_RS02735 d9efd21e1f7348f6ff1f27d707d5993e 196 Gene3D G3DSA:2.102.10.10 45 193 1.2E-35 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VV93_RS02735 d9efd21e1f7348f6ff1f27d707d5993e 196 PANTHER PTHR10134 1 194 1.1E-113 T 23-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 VV93_RS02735 d9efd21e1f7348f6ff1f27d707d5993e 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 4 40 2.6E-15 T 23-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VV93_RS02735 d9efd21e1f7348f6ff1f27d707d5993e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 3.0E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VV93_RS02735 d9efd21e1f7348f6ff1f27d707d5993e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 3.0E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VV93_RS02735 d9efd21e1f7348f6ff1f27d707d5993e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 3.0E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VV93_RS02735 d9efd21e1f7348f6ff1f27d707d5993e 196 SUPERFAMILY SSF50022 30 191 1.14E-43 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VV93_RS02735 d9efd21e1f7348f6ff1f27d707d5993e 196 PANTHER PTHR10134:SF8 1 194 1.1E-113 T 23-04-2016 VV93_RS02735 d9efd21e1f7348f6ff1f27d707d5993e 196 Pfam PF00355 Rieske [2Fe-2S] domain 54 174 1.3E-11 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VV93_RS02735 d9efd21e1f7348f6ff1f27d707d5993e 196 Gene3D G3DSA:1.20.5.510 8 40 1.7E-6 T 23-04-2016 VV93_RS11955 71cd352d957b615305551ca1286ef9c3 495 Pfam PF00437 Type II/IV secretion system protein 144 421 1.9E-85 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VV93_RS11955 71cd352d957b615305551ca1286ef9c3 495 PANTHER PTHR30258 27 472 1.0E-125 T 23-04-2016 VV93_RS11955 71cd352d957b615305551ca1286ef9c3 495 PANTHER PTHR30258:SF3 27 472 1.0E-125 T 23-04-2016 VV93_RS11955 71cd352d957b615305551ca1286ef9c3 495 SUPERFAMILY SSF52540 126 460 2.71E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11955 71cd352d957b615305551ca1286ef9c3 495 Gene3D G3DSA:3.40.50.300 242 470 1.1E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11955 71cd352d957b615305551ca1286ef9c3 495 Gene3D G3DSA:3.30.450.90 141 238 3.1E-37 T 23-04-2016 VV93_RS02385 655f3813d826f369db301e23d8f748f7 220 SMART SM00895 78 208 5.3E-7 T 23-04-2016 IPR011711 GntR, C-terminal VV93_RS02385 655f3813d826f369db301e23d8f748f7 220 Gene3D G3DSA:1.10.10.10 2 70 8.3E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS02385 655f3813d826f369db301e23d8f748f7 220 SUPERFAMILY SSF48008 74 215 4.45E-15 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VV93_RS02385 655f3813d826f369db301e23d8f748f7 220 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 1.7E-13 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV93_RS02385 655f3813d826f369db301e23d8f748f7 220 Gene3D G3DSA:1.20.120.530 73 218 1.9E-24 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VV93_RS02385 655f3813d826f369db301e23d8f748f7 220 SMART SM00345 10 68 1.5E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV93_RS02385 655f3813d826f369db301e23d8f748f7 220 Pfam PF07729 FCD domain 78 207 5.8E-14 T 23-04-2016 IPR011711 GntR, C-terminal VV93_RS02385 655f3813d826f369db301e23d8f748f7 220 SUPERFAMILY SSF46785 2 78 1.16E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS10700 cbff0ae7d09f7aaf788e54d99793114e 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.501 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VV93_RS10700 cbff0ae7d09f7aaf788e54d99793114e 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 23-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 VV93_RS10700 cbff0ae7d09f7aaf788e54d99793114e 199 SMART SM00493 81 166 8.9E-17 T 23-04-2016 IPR006171 Toprim domain VV93_RS10700 cbff0ae7d09f7aaf788e54d99793114e 199 Pfam PF13662 Toprim domain 83 172 1.4E-22 T 23-04-2016 IPR006171 Toprim domain VV93_RS10700 cbff0ae7d09f7aaf788e54d99793114e 199 SUPERFAMILY SSF111304 2 199 6.15E-72 T 23-04-2016 IPR023627 Recombination protein RecR VV93_RS10700 cbff0ae7d09f7aaf788e54d99793114e 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 1.5E-77 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VV93_RS10700 cbff0ae7d09f7aaf788e54d99793114e 199 Pfam PF02132 RecR protein 40 77 2.9E-15 T 23-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger VV93_RS10700 cbff0ae7d09f7aaf788e54d99793114e 199 PANTHER PTHR30446 1 199 1.3E-114 T 23-04-2016 VV93_RS10700 cbff0ae7d09f7aaf788e54d99793114e 199 PANTHER PTHR30446:SF0 1 199 1.3E-114 T 23-04-2016 VV93_RS11705 3f43dcd1d3536f5be1f7da5d5af08f53 403 PANTHER PTHR11601:SF17 5 403 1.1E-180 T 23-04-2016 VV93_RS11705 3f43dcd1d3536f5be1f7da5d5af08f53 403 SUPERFAMILY SSF53383 2 400 1.46E-121 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS11705 3f43dcd1d3536f5be1f7da5d5af08f53 403 PANTHER PTHR11601 5 403 1.1E-180 T 23-04-2016 VV93_RS11705 3f43dcd1d3536f5be1f7da5d5af08f53 403 PIRSF PIRSF005572 21 403 2.7E-51 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VV93_RS11705 3f43dcd1d3536f5be1f7da5d5af08f53 403 Pfam PF00266 Aminotransferase class-V 24 392 9.0E-147 T 23-04-2016 IPR000192 Aminotransferase class V domain VV93_RS11705 3f43dcd1d3536f5be1f7da5d5af08f53 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 2.0E-167 T 23-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VV93_RS11705 3f43dcd1d3536f5be1f7da5d5af08f53 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 2 403 7.5E-154 T 23-04-2016 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VV93_RS11705 3f43dcd1d3536f5be1f7da5d5af08f53 403 Gene3D G3DSA:3.40.640.10 35 282 2.5E-80 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS11705 3f43dcd1d3536f5be1f7da5d5af08f53 403 Gene3D G3DSA:3.90.1150.10 283 398 5.8E-27 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS05030 d32fe54d846875066d150c7983e00723 220 Gene3D G3DSA:2.160.20.70 100 218 1.4E-38 T 23-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 VV93_RS05030 d32fe54d846875066d150c7983e00723 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 6.1E-77 T 23-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 VV93_RS05030 d32fe54d846875066d150c7983e00723 220 SUPERFAMILY SSF63848 113 218 7.45E-31 T 23-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 VV93_RS05030 d32fe54d846875066d150c7983e00723 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 1.3E-31 T 23-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 VV93_RS05030 d32fe54d846875066d150c7983e00723 220 PANTHER PTHR34108 1 220 6.5E-57 T 23-04-2016 VV93_RS05030 d32fe54d846875066d150c7983e00723 220 PANTHER PTHR34108:SF1 1 220 6.5E-57 T 23-04-2016 VV93_RS05030 d32fe54d846875066d150c7983e00723 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 27.859 T 23-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 VV93_RS05030 d32fe54d846875066d150c7983e00723 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 7.3E-29 T 23-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 VV93_RS11240 427448d4e2380e7a617c708b940ebe23 319 SUPERFAMILY SSF52540 69 95 2.38E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11240 427448d4e2380e7a617c708b940ebe23 319 SUPERFAMILY SSF52540 132 262 2.38E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11240 427448d4e2380e7a617c708b940ebe23 319 Gene3D G3DSA:3.40.50.300 69 94 1.3E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11240 427448d4e2380e7a617c708b940ebe23 319 Gene3D G3DSA:3.40.50.300 128 258 1.3E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11755 587437aa13e6c2c1f230f7c5854ec3c8 1162 Gene3D G3DSA:3.40.50.300 662 758 1.3E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11755 587437aa13e6c2c1f230f7c5854ec3c8 1162 Gene3D G3DSA:3.40.50.300 348 456 1.3E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11755 587437aa13e6c2c1f230f7c5854ec3c8 1162 PANTHER PTHR30591 1 1161 0.0 T 23-04-2016 VV93_RS11755 587437aa13e6c2c1f230f7c5854ec3c8 1162 SUPERFAMILY SSF52980 843 1140 4.5E-73 T 23-04-2016 IPR011335 Restriction endonuclease type II-like VV93_RS11755 587437aa13e6c2c1f230f7c5854ec3c8 1162 SUPERFAMILY SSF52540 2 351 3.19E-122 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11755 587437aa13e6c2c1f230f7c5854ec3c8 1162 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1121 0.0 T 23-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VV93_RS11755 587437aa13e6c2c1f230f7c5854ec3c8 1162 Gene3D G3DSA:1.10.10.160 86 178 2.2E-33 T 23-04-2016 IPR013986 DExx box DNA helicase domain VV93_RS11755 587437aa13e6c2c1f230f7c5854ec3c8 1162 PIRSF PIRSF000980 1 1160 0.0 T 23-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VV93_RS11755 587437aa13e6c2c1f230f7c5854ec3c8 1162 SUPERFAMILY SSF52540 365 821 3.19E-101 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11755 587437aa13e6c2c1f230f7c5854ec3c8 1162 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 814 1.2E-297 T 23-04-2016 VV93_RS11755 587437aa13e6c2c1f230f7c5854ec3c8 1162 PANTHER PTHR30591:SF1 1 1161 0.0 T 23-04-2016 VV93_RS11755 587437aa13e6c2c1f230f7c5854ec3c8 1162 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1152 13.267 T 23-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VV93_RS07675 1a1d8a2dd3d9464dfcdfb4e3c1f3dfc6 497 Gene3D G3DSA:3.40.50.2300 2 124 3.1E-29 T 23-04-2016 VV93_RS07675 1a1d8a2dd3d9464dfcdfb4e3c1f3dfc6 497 SMART SM00382 162 304 1.3E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS07675 1a1d8a2dd3d9464dfcdfb4e3c1f3dfc6 497 Pfam PF00158 Sigma-54 interaction domain 143 309 1.1E-67 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV93_RS07675 1a1d8a2dd3d9464dfcdfb4e3c1f3dfc6 497 SUPERFAMILY SSF46689 439 492 7.17E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS07675 1a1d8a2dd3d9464dfcdfb4e3c1f3dfc6 497 PANTHER PTHR32071:SF33 413 497 3.5E-178 T 23-04-2016 VV93_RS07675 1a1d8a2dd3d9464dfcdfb4e3c1f3dfc6 497 PANTHER PTHR32071:SF33 1 393 3.5E-178 T 23-04-2016 VV93_RS07675 1a1d8a2dd3d9464dfcdfb4e3c1f3dfc6 497 PANTHER PTHR32071 413 497 3.5E-178 T 23-04-2016 VV93_RS07675 1a1d8a2dd3d9464dfcdfb4e3c1f3dfc6 497 PANTHER PTHR32071 1 393 3.5E-178 T 23-04-2016 VV93_RS07675 1a1d8a2dd3d9464dfcdfb4e3c1f3dfc6 497 SUPERFAMILY SSF52540 142 385 2.55E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07675 1a1d8a2dd3d9464dfcdfb4e3c1f3dfc6 497 SMART SM00448 3 114 2.6E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS07675 1a1d8a2dd3d9464dfcdfb4e3c1f3dfc6 497 Pfam PF00072 Response regulator receiver domain 5 114 1.3E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS07675 1a1d8a2dd3d9464dfcdfb4e3c1f3dfc6 497 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VV93_RS07675 1a1d8a2dd3d9464dfcdfb4e3c1f3dfc6 497 Gene3D G3DSA:1.10.8.60 315 392 3.3E-25 T 23-04-2016 VV93_RS07675 1a1d8a2dd3d9464dfcdfb4e3c1f3dfc6 497 Gene3D G3DSA:3.40.50.300 140 314 4.3E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07675 1a1d8a2dd3d9464dfcdfb4e3c1f3dfc6 497 Gene3D G3DSA:1.10.10.60 447 487 2.5E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS07675 1a1d8a2dd3d9464dfcdfb4e3c1f3dfc6 497 Pfam PF02954 Bacterial regulatory protein, Fis family 451 487 1.0E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS07675 1a1d8a2dd3d9464dfcdfb4e3c1f3dfc6 497 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV93_RS07675 1a1d8a2dd3d9464dfcdfb4e3c1f3dfc6 497 SUPERFAMILY SSF52172 3 186 3.98E-36 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS15180 97ead54f7d45c3d428749b481265e597 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 240 3.3E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS15180 97ead54f7d45c3d428749b481265e597 246 Gene3D G3DSA:1.10.3720.10 41 240 3.6E-48 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS15180 97ead54f7d45c3d428749b481265e597 246 SUPERFAMILY SSF161098 41 227 3.4E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS15180 97ead54f7d45c3d428749b481265e597 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 38 136 1.6E-28 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VV93_RS15180 97ead54f7d45c3d428749b481265e597 246 PANTHER PTHR30614 37 246 4.4E-80 T 23-04-2016 VV93_RS09340 68115f82865cba8454887f992adcc845 514 SMART SM00091 80 146 3.9E-8 T 23-04-2016 IPR000014 PAS domain VV93_RS09340 68115f82865cba8454887f992adcc845 514 Gene3D G3DSA:3.30.70.260 1 68 8.3E-6 T 23-04-2016 VV93_RS09340 68115f82865cba8454887f992adcc845 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 2.7E-28 T 23-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 VV93_RS09340 68115f82865cba8454887f992adcc845 514 Pfam PF00989 PAS fold 84 132 4.1E-6 T 23-04-2016 IPR013767 PAS fold GO:0006355 VV93_RS09340 68115f82865cba8454887f992adcc845 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV93_RS09340 68115f82865cba8454887f992adcc845 514 SUPERFAMILY SSF52540 205 445 3.48E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09340 68115f82865cba8454887f992adcc845 514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 83 139 8.4E-6 T 23-04-2016 IPR000014 PAS domain VV93_RS09340 68115f82865cba8454887f992adcc845 514 SUPERFAMILY SSF55021 1 68 5.6E-6 T 23-04-2016 VV93_RS09340 68115f82865cba8454887f992adcc845 514 PANTHER PTHR32071:SF3 4 511 5.2E-177 T 23-04-2016 VV93_RS09340 68115f82865cba8454887f992adcc845 514 SUPERFAMILY SSF46689 460 512 6.57E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS09340 68115f82865cba8454887f992adcc845 514 Gene3D G3DSA:3.40.50.300 202 376 7.5E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09340 68115f82865cba8454887f992adcc845 514 SUPERFAMILY SSF55785 84 174 2.27E-10 T 23-04-2016 IPR000014 PAS domain VV93_RS09340 68115f82865cba8454887f992adcc845 514 Gene3D G3DSA:3.30.450.20 77 173 1.1E-10 T 23-04-2016 VV93_RS09340 68115f82865cba8454887f992adcc845 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VV93_RS09340 68115f82865cba8454887f992adcc845 514 PANTHER PTHR32071 4 511 5.2E-177 T 23-04-2016 VV93_RS09340 68115f82865cba8454887f992adcc845 514 Gene3D G3DSA:1.10.8.60 377 450 9.1E-17 T 23-04-2016 VV93_RS09340 68115f82865cba8454887f992adcc845 514 Pfam PF00158 Sigma-54 interaction domain 206 370 1.2E-57 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV93_RS09340 68115f82865cba8454887f992adcc845 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VV93_RS09340 68115f82865cba8454887f992adcc845 514 SMART SM00382 225 368 5.4E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS09340 68115f82865cba8454887f992adcc845 514 Gene3D G3DSA:1.10.10.60 459 512 1.9E-25 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14870 ddd0578253e54244d15762d5b27b8776 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 23-04-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 VV93_RS14870 ddd0578253e54244d15762d5b27b8776 724 PANTHER PTHR11070 7 724 9.4E-241 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VV93_RS14870 ddd0578253e54244d15762d5b27b8776 724 SUPERFAMILY SSF52540 8 643 1.48E-180 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14870 ddd0578253e54244d15762d5b27b8776 724 Gene3D G3DSA:1.10.10.160 115 191 2.2E-23 T 23-04-2016 IPR013986 DExx box DNA helicase domain VV93_RS14870 ddd0578253e54244d15762d5b27b8776 724 Gene3D G3DSA:3.40.50.300 8 111 1.2E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14870 ddd0578253e54244d15762d5b27b8776 724 Gene3D G3DSA:3.40.50.300 192 286 1.2E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14870 ddd0578253e54244d15762d5b27b8776 724 Gene3D G3DSA:1.10.486.10 389 542 3.0E-50 T 23-04-2016 VV93_RS14870 ddd0578253e54244d15762d5b27b8776 724 PANTHER PTHR11070:SF7 7 724 9.4E-241 T 23-04-2016 VV93_RS14870 ddd0578253e54244d15762d5b27b8776 724 Gene3D G3DSA:3.40.50.300 287 388 2.3E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14870 ddd0578253e54244d15762d5b27b8776 724 Gene3D G3DSA:3.40.50.300 553 643 2.3E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14870 ddd0578253e54244d15762d5b27b8776 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 9.2E-75 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 VV93_RS14870 ddd0578253e54244d15762d5b27b8776 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 2.9E-77 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VV93_RS09640 e5245aaa05521e51688bfbb34f9f680a 303 SUPERFAMILY SSF53850 89 296 2.85E-40 T 23-04-2016 VV93_RS09640 e5245aaa05521e51688bfbb34f9f680a 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS09640 e5245aaa05521e51688bfbb34f9f680a 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS09640 e5245aaa05521e51688bfbb34f9f680a 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS09640 e5245aaa05521e51688bfbb34f9f680a 303 Pfam PF03466 LysR substrate binding domain 89 293 3.3E-42 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS09640 e5245aaa05521e51688bfbb34f9f680a 303 PANTHER PTHR30126 1 303 3.3E-182 T 23-04-2016 VV93_RS09640 e5245aaa05521e51688bfbb34f9f680a 303 Gene3D G3DSA:3.40.190.10 177 261 4.0E-20 T 23-04-2016 VV93_RS09640 e5245aaa05521e51688bfbb34f9f680a 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 8.0E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS09640 e5245aaa05521e51688bfbb34f9f680a 303 SUPERFAMILY SSF46785 1 112 5.9E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS09640 e5245aaa05521e51688bfbb34f9f680a 303 Gene3D G3DSA:1.10.10.10 1 87 3.2E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS09640 e5245aaa05521e51688bfbb34f9f680a 303 PANTHER PTHR30126:SF25 1 303 3.3E-182 T 23-04-2016 VV93_RS09640 e5245aaa05521e51688bfbb34f9f680a 303 Gene3D G3DSA:3.40.190.10 89 176 5.6E-12 T 23-04-2016 VV93_RS18440 a204962cb46f697d850709f1ec4b347d 251 Pfam PF03175 DNA polymerase type B, organellar and viral 32 109 7.1E-8 T 23-04-2016 IPR004868 DNA-directed DNA polymerase, family B, mitochondria/virus GO:0000166|GO:0003677|GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS18440 a204962cb46f697d850709f1ec4b347d 251 SUPERFAMILY SSF56672 9 207 5.91E-12 T 23-04-2016 VV93_RS01825 4a8e027edf593979c60b380a74d4b34d 110 Pfam PF00237 Ribosomal protein L22p/L17e 9 107 1.5E-35 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VV93_RS01825 4a8e027edf593979c60b380a74d4b34d 110 SUPERFAMILY SSF54843 1 109 7.85E-45 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VV93_RS01825 4a8e027edf593979c60b380a74d4b34d 110 Gene3D G3DSA:3.90.470.10 1 109 5.7E-45 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VV93_RS01825 4a8e027edf593979c60b380a74d4b34d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.662 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 VV93_RS01825 4a8e027edf593979c60b380a74d4b34d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 2.0E-50 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 VV93_RS01825 4a8e027edf593979c60b380a74d4b34d 110 PANTHER PTHR13501 1 109 2.6E-55 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 VV93_RS01825 4a8e027edf593979c60b380a74d4b34d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 23-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS04875 677a666731a8bccb0d3c7de5a1c10e87 252 Gene3D G3DSA:3.40.1390.30 1 107 7.8E-39 T 23-04-2016 VV93_RS04875 677a666731a8bccb0d3c7de5a1c10e87 252 SUPERFAMILY SSF102705 1 251 2.35E-82 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VV93_RS04875 677a666731a8bccb0d3c7de5a1c10e87 252 PANTHER PTHR13799 1 248 1.8E-78 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VV93_RS04875 677a666731a8bccb0d3c7de5a1c10e87 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 2.1E-68 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VV93_RS04875 677a666731a8bccb0d3c7de5a1c10e87 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 238 3.0E-59 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VV93_RS04875 677a666731a8bccb0d3c7de5a1c10e87 252 Gene3D G3DSA:3.40.1390.30 108 219 4.6E-28 T 23-04-2016 VV93_RS07170 d8c3536612fba38ceaaacdcfb98ce53c 634 PRINTS PR01607 Apyrase family signature 26 44 3.9E-13 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS07170 d8c3536612fba38ceaaacdcfb98ce53c 634 PRINTS PR01607 Apyrase family signature 257 277 3.9E-13 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS07170 d8c3536612fba38ceaaacdcfb98ce53c 634 PRINTS PR01607 Apyrase family signature 203 220 3.9E-13 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS07170 d8c3536612fba38ceaaacdcfb98ce53c 634 PRINTS PR01607 Apyrase family signature 230 253 3.9E-13 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS07170 d8c3536612fba38ceaaacdcfb98ce53c 634 SUPERFAMILY SSF55816 338 547 7.59E-25 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VV93_RS07170 d8c3536612fba38ceaaacdcfb98ce53c 634 Gene3D G3DSA:3.90.780.10 341 548 6.7E-22 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VV93_RS07170 d8c3536612fba38ceaaacdcfb98ce53c 634 PANTHER PTHR11575 9 424 5.5E-182 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS07170 d8c3536612fba38ceaaacdcfb98ce53c 634 PANTHER PTHR11575 440 589 5.5E-182 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS07170 d8c3536612fba38ceaaacdcfb98ce53c 634 Pfam PF00149 Calcineurin-like phosphoesterase 29 247 1.1E-14 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VV93_RS07170 d8c3536612fba38ceaaacdcfb98ce53c 634 ProSitePatterns PS00786 5'-nucleotidase signature 2. 107 118 - T 23-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VV93_RS07170 d8c3536612fba38ceaaacdcfb98ce53c 634 Gene3D G3DSA:3.60.21.10 16 327 4.0E-82 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like VV93_RS07170 d8c3536612fba38ceaaacdcfb98ce53c 634 SUPERFAMILY SSF56300 19 327 1.19E-75 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like VV93_RS07170 d8c3536612fba38ceaaacdcfb98ce53c 634 Pfam PF02872 5'-nucleotidase, C-terminal domain 342 492 4.9E-22 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VV93_RS07170 d8c3536612fba38ceaaacdcfb98ce53c 634 PANTHER PTHR11575:SF27 9 424 5.5E-182 T 23-04-2016 VV93_RS07170 d8c3536612fba38ceaaacdcfb98ce53c 634 PANTHER PTHR11575:SF27 440 589 5.5E-182 T 23-04-2016 VV93_RS13075 23fc04f7558d229255ca97708480fa77 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 3.1E-64 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VV93_RS13075 23fc04f7558d229255ca97708480fa77 200 PANTHER PTHR11067 1 200 1.4E-81 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VV93_RS13075 23fc04f7558d229255ca97708480fa77 200 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 50.203 T 23-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VV93_RS13075 23fc04f7558d229255ca97708480fa77 200 Gene3D G3DSA:3.90.950.10 1 196 6.0E-80 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VV93_RS13075 23fc04f7558d229255ca97708480fa77 200 Pfam PF01725 Ham1 family 4 191 1.1E-55 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VV93_RS13075 23fc04f7558d229255ca97708480fa77 200 PANTHER PTHR11067:SF9 1 200 1.4E-81 T 23-04-2016 VV93_RS13075 23fc04f7558d229255ca97708480fa77 200 SUPERFAMILY SSF52972 1 196 6.02E-73 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VV93_RS10065 3b269f458c629d3ca685a0ad9579ed5c 139 PIRSF PIRSF003230 2 138 8.2E-47 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VV93_RS10065 3b269f458c629d3ca685a0ad9579ed5c 139 Pfam PF03061 Thioesterase superfamily 22 107 1.9E-16 T 23-04-2016 IPR006683 Thioesterase domain VV93_RS10065 3b269f458c629d3ca685a0ad9579ed5c 139 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 8 132 1.8E-49 T 23-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- VV93_RS10065 3b269f458c629d3ca685a0ad9579ed5c 139 Gene3D G3DSA:3.10.129.10 6 133 1.3E-47 T 23-04-2016 IPR029069 HotDog domain VV93_RS10065 3b269f458c629d3ca685a0ad9579ed5c 139 PANTHER PTHR31793 5 134 2.1E-50 T 23-04-2016 VV93_RS10065 3b269f458c629d3ca685a0ad9579ed5c 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 11 127 9.3E-38 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VV93_RS10065 3b269f458c629d3ca685a0ad9579ed5c 139 PANTHER PTHR31793:SF9 5 134 2.1E-50 T 23-04-2016 VV93_RS10065 3b269f458c629d3ca685a0ad9579ed5c 139 SUPERFAMILY SSF54637 6 134 1.83E-40 T 23-04-2016 IPR029069 HotDog domain VV93_RS03935 ee7d51d7eac30c346e6c2871a51c45ce 170 SUPERFAMILY SSF54523 5 149 3.22E-15 T 23-04-2016 VV93_RS03935 ee7d51d7eac30c346e6c2871a51c45ce 170 Gene3D G3DSA:3.30.700.10 5 47 7.1E-5 T 23-04-2016 VV93_RS03935 ee7d51d7eac30c346e6c2871a51c45ce 170 Pfam PF13633 Prokaryotic N-terminal methylation site 3 27 1.5E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS03935 ee7d51d7eac30c346e6c2871a51c45ce 170 PIRSF PIRSF024622 1 170 8.8E-83 T 23-04-2016 IPR016824 Tfp pilus assembly protein FimT VV93_RS03935 ee7d51d7eac30c346e6c2871a51c45ce 170 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS03935 ee7d51d7eac30c346e6c2871a51c45ce 170 Pfam PF12019 Type II transport protein GspH 42 139 3.7E-8 T 23-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VV93_RS03935 ee7d51d7eac30c346e6c2871a51c45ce 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 3.6E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS13805 16bec5c746d63037086bc4b6f7de01a3 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 23-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS13805 16bec5c746d63037086bc4b6f7de01a3 172 Gene3D G3DSA:3.40.50.300 2 171 1.2E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13805 16bec5c746d63037086bc4b6f7de01a3 172 Pfam PF01202 Shikimate kinase 13 169 2.5E-56 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS13805 16bec5c746d63037086bc4b6f7de01a3 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.411 T 23-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS13805 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 98 115 5.2E-29 T 23-04-2016 VV93_RS13805 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 7 22 5.2E-29 T 23-04-2016 VV93_RS13805 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 77 86 5.2E-29 T 23-04-2016 VV93_RS13805 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 31 44 5.2E-29 T 23-04-2016 VV93_RS13805 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 59 67 5.2E-29 T 23-04-2016 VV93_RS13805 16bec5c746d63037086bc4b6f7de01a3 172 SUPERFAMILY SSF52540 4 169 4.26E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13805 16bec5c746d63037086bc4b6f7de01a3 172 PANTHER PTHR21087 1 171 9.3E-73 T 23-04-2016 VV93_RS01430 d2923d109ff2072f5a6f2e397d766ec9 213 PANTHER PTHR19278 1 213 1.7E-144 T 23-04-2016 VV93_RS01430 d2923d109ff2072f5a6f2e397d766ec9 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 4.0E-12 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VV93_RS01430 d2923d109ff2072f5a6f2e397d766ec9 213 PANTHER PTHR19278:SF36 1 213 1.7E-144 T 23-04-2016 VV93_RS01430 d2923d109ff2072f5a6f2e397d766ec9 213 SUPERFAMILY SSF53271 2 211 1.02E-49 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like VV93_RS01430 d2923d109ff2072f5a6f2e397d766ec9 213 Gene3D G3DSA:3.40.50.2020 7 212 1.4E-84 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like VV93_RS01430 d2923d109ff2072f5a6f2e397d766ec9 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 4.6E-70 T 23-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 VV93_RS01430 d2923d109ff2072f5a6f2e397d766ec9 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.153 T 23-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 VV93_RS06075 2df2b10e0e999efd81eadd9f6aca37f5 213 PANTHER PTHR10285 1 211 1.6E-95 T 23-04-2016 VV93_RS06075 2df2b10e0e999efd81eadd9f6aca37f5 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 1.0E-42 T 23-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 VV93_RS06075 2df2b10e0e999efd81eadd9f6aca37f5 213 Gene3D G3DSA:3.40.50.300 3 204 3.9E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06075 2df2b10e0e999efd81eadd9f6aca37f5 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 1.6E-90 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VV93_RS06075 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 41 52 2.7E-36 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VV93_RS06075 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 7 24 2.7E-36 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VV93_RS06075 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 178 191 2.7E-36 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VV93_RS06075 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 156 167 2.7E-36 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VV93_RS06075 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 86 101 2.7E-36 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VV93_RS06075 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 142 152 2.7E-36 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VV93_RS06075 2df2b10e0e999efd81eadd9f6aca37f5 213 SUPERFAMILY SSF52540 8 204 4.87E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06075 2df2b10e0e999efd81eadd9f6aca37f5 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.47 T 23-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VV93_RS03250 922e1b5e7d53e41afaa744cdb8c0c52e 651 Gene3D G3DSA:1.10.1240.20 413 479 5.7E-25 T 23-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 VV93_RS03250 922e1b5e7d53e41afaa744cdb8c0c52e 651 SUPERFAMILY SSF48435 36 484 2.75E-127 T 23-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 VV93_RS03250 922e1b5e7d53e41afaa744cdb8c0c52e 651 Gene3D G3DSA:1.10.530.10 483 638 4.6E-49 T 23-04-2016 VV93_RS03250 922e1b5e7d53e41afaa744cdb8c0c52e 651 Gene3D G3DSA:1.25.20.10 36 396 2.7E-105 T 23-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 VV93_RS03250 922e1b5e7d53e41afaa744cdb8c0c52e 651 SUPERFAMILY SSF53955 487 645 1.06E-48 T 23-04-2016 IPR023346 Lysozyme-like domain VV93_RS03250 922e1b5e7d53e41afaa744cdb8c0c52e 651 Pfam PF01464 Transglycosylase SLT domain 492 604 7.3E-30 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 VV93_RS03250 922e1b5e7d53e41afaa744cdb8c0c52e 651 PANTHER PTHR21666 470 635 3.3E-77 T 23-04-2016 VV93_RS03250 922e1b5e7d53e41afaa744cdb8c0c52e 651 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 508 536 - T 23-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VV93_RS03250 922e1b5e7d53e41afaa744cdb8c0c52e 651 PANTHER PTHR21666:SF190 470 635 3.3E-77 T 23-04-2016 VV93_RS03250 922e1b5e7d53e41afaa744cdb8c0c52e 651 Pfam PF14718 Soluble lytic murein transglycosylase L domain 414 479 3.3E-23 T 23-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 VV93_RS06645 03db29d82e9b011bacd6341cc696e772 261 Gene3D G3DSA:3.40.50.300 2 252 4.7E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06645 03db29d82e9b011bacd6341cc696e772 261 SMART SM00382 38 227 2.6E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS06645 03db29d82e9b011bacd6341cc696e772 261 PANTHER PTHR24220:SF81 6 259 4.4E-119 T 23-04-2016 VV93_RS06645 03db29d82e9b011bacd6341cc696e772 261 Pfam PF00005 ABC transporter 30 178 3.6E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS06645 03db29d82e9b011bacd6341cc696e772 261 PANTHER PTHR24220 6 259 4.4E-119 T 23-04-2016 VV93_RS06645 03db29d82e9b011bacd6341cc696e772 261 SUPERFAMILY SSF52540 3 252 1.62E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04840 a02260ed3ecd7986c302934f53fd8119 177 SUPERFAMILY SSF82808 62 176 2.48E-49 T 23-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VV93_RS04840 a02260ed3ecd7986c302934f53fd8119 177 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 177 41.617 T 23-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 VV93_RS04840 a02260ed3ecd7986c302934f53fd8119 177 Pfam PF03925 SeqA protein C-terminal domain 68 175 2.9E-46 T 23-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VV93_RS04840 a02260ed3ecd7986c302934f53fd8119 177 Gene3D G3DSA:1.20.1380.10 66 177 1.1E-50 T 23-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VV93_RS04840 a02260ed3ecd7986c302934f53fd8119 177 Gene3D G3DSA:1.10.1220.10 1 39 1.5E-26 T 23-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VV93_RS04840 a02260ed3ecd7986c302934f53fd8119 177 SUPERFAMILY SSF47598 1 34 5.78E-14 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 VV93_RS00170 b3f7411d9df3cc46cecf5bd59fdefc1c 296 Gene3D G3DSA:1.10.10.10 1 80 1.8E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS00170 b3f7411d9df3cc46cecf5bd59fdefc1c 296 PANTHER PTHR30126 1 296 1.4E-165 T 23-04-2016 VV93_RS00170 b3f7411d9df3cc46cecf5bd59fdefc1c 296 Gene3D G3DSA:3.40.190.10 199 262 9.3E-11 T 23-04-2016 VV93_RS00170 b3f7411d9df3cc46cecf5bd59fdefc1c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.5E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS00170 b3f7411d9df3cc46cecf5bd59fdefc1c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.5E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS00170 b3f7411d9df3cc46cecf5bd59fdefc1c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.5E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS00170 b3f7411d9df3cc46cecf5bd59fdefc1c 296 SUPERFAMILY SSF53850 88 290 8.28E-32 T 23-04-2016 VV93_RS00170 b3f7411d9df3cc46cecf5bd59fdefc1c 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.4E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS00170 b3f7411d9df3cc46cecf5bd59fdefc1c 296 PANTHER PTHR30126:SF14 1 296 1.4E-165 T 23-04-2016 VV93_RS00170 b3f7411d9df3cc46cecf5bd59fdefc1c 296 Gene3D G3DSA:3.40.190.10 86 198 9.7E-20 T 23-04-2016 VV93_RS00170 b3f7411d9df3cc46cecf5bd59fdefc1c 296 Pfam PF03466 LysR substrate binding domain 88 289 2.4E-34 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS00170 b3f7411d9df3cc46cecf5bd59fdefc1c 296 SUPERFAMILY SSF46785 1 79 2.66E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS12050 21bb00fa0a895bd9f246026a9f6285c8 307 Gene3D G3DSA:3.40.50.1000 37 53 5.1E-8 T 23-04-2016 IPR023214 HAD-like domain VV93_RS12050 21bb00fa0a895bd9f246026a9f6285c8 307 Gene3D G3DSA:3.40.50.1000 140 261 5.1E-8 T 23-04-2016 IPR023214 HAD-like domain VV93_RS12050 21bb00fa0a895bd9f246026a9f6285c8 307 SUPERFAMILY SSF56784 35 248 5.61E-14 T 23-04-2016 IPR023214 HAD-like domain VV93_RS12050 21bb00fa0a895bd9f246026a9f6285c8 307 Pfam PF12710 haloacid dehalogenase-like hydrolase 40 232 1.3E-12 T 23-04-2016 VV93_RS02370 72f69bb411a8c2f428c4932f93542669 164 Gene3D G3DSA:3.30.70.260 1 78 1.3E-35 T 23-04-2016 VV93_RS02370 72f69bb411a8c2f428c4932f93542669 164 PANTHER PTHR30239 1 164 7.0E-91 T 23-04-2016 VV93_RS02370 72f69bb411a8c2f428c4932f93542669 164 SUPERFAMILY SSF55021 79 162 6.47E-27 T 23-04-2016 VV93_RS02370 72f69bb411a8c2f428c4932f93542669 164 SUPERFAMILY SSF55021 2 75 9.41E-23 T 23-04-2016 VV93_RS02370 72f69bb411a8c2f428c4932f93542669 164 Gene3D G3DSA:3.30.70.1150 83 163 1.3E-28 T 23-04-2016 VV93_RS02370 72f69bb411a8c2f428c4932f93542669 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 8.0E-38 T 23-04-2016 VV93_RS02370 72f69bb411a8c2f428c4932f93542669 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 1.7E-25 T 23-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS02370 72f69bb411a8c2f428c4932f93542669 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 1.0E-62 T 23-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS02370 72f69bb411a8c2f428c4932f93542669 164 Pfam PF01842 ACT domain 3 68 1.8E-16 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VV93_RS06370 0657648ef51be8598148ce9ed8ac7078 425 SUPERFAMILY SSF53383 4 420 4.7E-135 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS06370 0657648ef51be8598148ce9ed8ac7078 425 PANTHER PTHR11986 2 422 2.7E-203 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV93_RS06370 0657648ef51be8598148ce9ed8ac7078 425 Gene3D G3DSA:3.40.640.10 59 326 7.8E-92 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS06370 0657648ef51be8598148ce9ed8ac7078 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV93_RS06370 0657648ef51be8598148ce9ed8ac7078 425 Gene3D G3DSA:3.90.1150.10 3 58 6.6E-55 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS06370 0657648ef51be8598148ce9ed8ac7078 425 Gene3D G3DSA:3.90.1150.10 329 420 6.6E-55 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS06370 0657648ef51be8598148ce9ed8ac7078 425 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 3.6E-178 T 23-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 VV93_RS06370 0657648ef51be8598148ce9ed8ac7078 425 PANTHER PTHR11986:SF8 2 422 2.7E-203 T 23-04-2016 VV93_RS06370 0657648ef51be8598148ce9ed8ac7078 425 Pfam PF00202 Aminotransferase class-III 24 418 1.8E-129 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV93_RS06370 0657648ef51be8598148ce9ed8ac7078 425 PIRSF PIRSF000521 22 421 7.4E-39 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV93_RS06370 0657648ef51be8598148ce9ed8ac7078 425 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 48.886 T 23-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 VV93_RS02260 86a7936613ff6412c517f1e9ca2b99b7 389 Pfam PF01018 GTP1/OBG 3 156 4.6E-58 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VV93_RS02260 86a7936613ff6412c517f1e9ca2b99b7 389 Gene3D G3DSA:2.70.210.12 2 155 6.4E-57 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VV93_RS02260 86a7936613ff6412c517f1e9ca2b99b7 389 SUPERFAMILY SSF82051 2 157 2.35E-55 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VV93_RS02260 86a7936613ff6412c517f1e9ca2b99b7 389 PIRSF PIRSF002401 1 374 1.7E-137 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VV93_RS02260 86a7936613ff6412c517f1e9ca2b99b7 389 Pfam PF01926 50S ribosome-binding GTPase 162 284 3.6E-23 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS02260 86a7936613ff6412c517f1e9ca2b99b7 389 Gene3D G3DSA:3.40.50.300 156 341 3.2E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02260 86a7936613ff6412c517f1e9ca2b99b7 389 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.976 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VV93_RS02260 86a7936613ff6412c517f1e9ca2b99b7 389 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 23-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 VV93_RS02260 86a7936613ff6412c517f1e9ca2b99b7 389 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 6.8E-144 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VV93_RS02260 86a7936613ff6412c517f1e9ca2b99b7 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.1E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS02260 86a7936613ff6412c517f1e9ca2b99b7 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.1E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS02260 86a7936613ff6412c517f1e9ca2b99b7 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.1E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS02260 86a7936613ff6412c517f1e9ca2b99b7 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.1E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS02260 86a7936613ff6412c517f1e9ca2b99b7 389 PANTHER PTHR11702 1 378 1.2E-183 T 23-04-2016 VV93_RS02260 86a7936613ff6412c517f1e9ca2b99b7 389 PANTHER PTHR11702:SF3 1 378 1.2E-183 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VV93_RS02260 86a7936613ff6412c517f1e9ca2b99b7 389 SUPERFAMILY SSF52540 151 341 1.48E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 PANTHER PTHR24423 626 760 2.8E-234 T 23-04-2016 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 PANTHER PTHR24423 179 198 2.8E-234 T 23-04-2016 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 PANTHER PTHR24423 9 60 2.8E-234 T 23-04-2016 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 PANTHER PTHR24423 786 1143 2.8E-234 T 23-04-2016 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 Gene3D G3DSA:3.40.50.2300 1021 1142 6.0E-19 T 23-04-2016 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 PANTHER PTHR24423:SF439 626 760 2.8E-234 T 23-04-2016 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 PANTHER PTHR24423:SF439 179 198 2.8E-234 T 23-04-2016 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 PANTHER PTHR24423:SF439 9 60 2.8E-234 T 23-04-2016 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 PANTHER PTHR24423:SF439 786 1143 2.8E-234 T 23-04-2016 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 Gene3D G3DSA:3.30.565.10 855 1006 4.6E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 Pfam PF00072 Response regulator receiver domain 1028 1139 1.4E-12 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1005 3.5E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 1.1E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 1.6E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 1.6E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 1.6E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 1.6E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 Gene3D G3DSA:1.10.287.130 786 849 2.1E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 SUPERFAMILY SSF55874 843 1002 3.01E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 SUPERFAMILY SSF55785 626 741 2.93E-9 T 23-04-2016 IPR000014 PAS domain VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 SUPERFAMILY SSF52172 1025 1143 4.41E-20 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 Gene3D G3DSA:3.30.450.20 626 741 2.6E-14 T 23-04-2016 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 SMART SM00388 788 853 1.1E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 SMART SM00387 897 1006 1.0E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 SUPERFAMILY SSF47384 775 854 6.28E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 Pfam PF12860 PAS fold 634 748 6.6E-44 T 23-04-2016 VV93_RS14510 0d2eac0f5ac074f8e9d7ba15a65ede23 1143 SMART SM00448 1026 1139 8.6E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 8.5E-9 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 304.737 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.8E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.8E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.8E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.8E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.8E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 SUPERFAMILY SSF54980 292 370 2.09E-18 T 23-04-2016 IPR009022 Elongation factor G, III-V domain VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 Gene3D G3DSA:3.40.50.300 2 192 7.5E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 PANTHER PTHR23115 397 595 1.6E-276 T 23-04-2016 VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 PANTHER PTHR23115 2 373 1.6E-276 T 23-04-2016 VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 6.0E-17 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 Gene3D G3DSA:2.40.30.10 193 289 2.2E-23 T 23-04-2016 VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 SUPERFAMILY SSF52540 2 205 1.86E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 4.5E-53 T 23-04-2016 VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 SMART SM00838 398 486 0.0072 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 3.5E-299 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 PANTHER PTHR23115:SF175 397 595 1.6E-276 T 23-04-2016 VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 PANTHER PTHR23115:SF175 2 373 1.6E-276 T 23-04-2016 VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 Gene3D G3DSA:3.30.70.870 291 369 1.2E-25 T 23-04-2016 VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 Pfam PF00679 Elongation factor G C-terminus 399 482 6.3E-20 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 SUPERFAMILY SSF54980 399 493 1.97E-24 T 23-04-2016 IPR009022 Elongation factor G, III-V domain VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 2.5E-49 T 23-04-2016 IPR013842 GTP-binding protein LepA, C-terminal VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 SUPERFAMILY SSF50447 165 288 5.3E-29 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain VV93_RS12860 0a2455c0fa3cc1de0549b68fc32f5e03 597 Gene3D G3DSA:3.30.70.240 401 489 4.6E-21 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain VV93_RS05045 8e801ccaee9518020cd8e56de189753b 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 8.6E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS05045 8e801ccaee9518020cd8e56de189753b 314 PANTHER PTHR30537 1 313 5.0E-182 T 23-04-2016 VV93_RS05045 8e801ccaee9518020cd8e56de189753b 314 Gene3D G3DSA:3.40.190.10 172 263 3.0E-23 T 23-04-2016 VV93_RS05045 8e801ccaee9518020cd8e56de189753b 314 SUPERFAMILY SSF53850 90 298 1.36E-46 T 23-04-2016 VV93_RS05045 8e801ccaee9518020cd8e56de189753b 314 PANTHER PTHR30537:SF14 1 313 5.0E-182 T 23-04-2016 VV93_RS05045 8e801ccaee9518020cd8e56de189753b 314 Pfam PF03466 LysR substrate binding domain 90 295 2.3E-43 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS05045 8e801ccaee9518020cd8e56de189753b 314 SUPERFAMILY SSF46785 8 90 4.63E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS05045 8e801ccaee9518020cd8e56de189753b 314 Gene3D G3DSA:1.10.10.10 8 87 2.3E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS05045 8e801ccaee9518020cd8e56de189753b 314 Gene3D G3DSA:3.40.190.10 92 171 8.9E-8 T 23-04-2016 VV93_RS06165 b62b83239ba9604b43b9d961b205db76 212 SUPERFAMILY SSF52540 1 210 1.4E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06165 b62b83239ba9604b43b9d961b205db76 212 PANTHER PTHR10344 1 212 1.4E-69 T 23-04-2016 VV93_RS06165 b62b83239ba9604b43b9d961b205db76 212 Gene3D G3DSA:3.40.50.300 5 208 1.8E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06165 b62b83239ba9604b43b9d961b205db76 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 8.0E-64 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VV93_RS06165 b62b83239ba9604b43b9d961b205db76 212 Pfam PF02223 Thymidylate kinase 9 199 3.6E-58 T 23-04-2016 VV93_RS06165 b62b83239ba9604b43b9d961b205db76 212 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 23-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VV93_RS06165 b62b83239ba9604b43b9d961b205db76 212 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 27.325 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VV93_RS09915 6fb156be37071aca64063661a2305156 142 PANTHER PTHR38978:SF1 1 141 2.2E-50 T 23-04-2016 VV93_RS09915 6fb156be37071aca64063661a2305156 142 PANTHER PTHR38978 1 141 2.2E-50 T 23-04-2016 VV93_RS09915 6fb156be37071aca64063661a2305156 142 Pfam PF10980 Protein of unknown function (DUF2787) 15 139 1.6E-35 T 23-04-2016 IPR021248 Protein of unknown function DUF2787 VV93_RS12245 5e54b0f8cdbd829ae08cafb16bc09115 110 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 4.8E-25 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VV93_RS12245 5e54b0f8cdbd829ae08cafb16bc09115 110 Pfam PF03840 Preprotein translocase SecG subunit 4 71 1.5E-21 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VV93_RS12245 5e54b0f8cdbd829ae08cafb16bc09115 110 PANTHER PTHR34182 2 109 7.6E-31 T 23-04-2016 VV93_RS12245 5e54b0f8cdbd829ae08cafb16bc09115 110 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.4E-44 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VV93_RS12245 5e54b0f8cdbd829ae08cafb16bc09115 110 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.4E-44 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VV93_RS12245 5e54b0f8cdbd829ae08cafb16bc09115 110 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.4E-44 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VV93_RS12245 5e54b0f8cdbd829ae08cafb16bc09115 110 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.4E-44 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VV93_RS01480 6e433778def44842e9b2aaf3c3d6b004 658 SUPERFAMILY SSF53649 280 589 2.16E-25 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VV93_RS01480 6e433778def44842e9b2aaf3c3d6b004 658 PANTHER PTHR10342 253 572 3.1E-18 T 23-04-2016 VV93_RS01480 6e433778def44842e9b2aaf3c3d6b004 658 Gene3D G3DSA:3.40.720.10 281 588 2.9E-19 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VV93_RS01480 6e433778def44842e9b2aaf3c3d6b004 658 PANTHER PTHR10342:SF236 253 572 3.1E-18 T 23-04-2016 VV93_RS01480 6e433778def44842e9b2aaf3c3d6b004 658 Pfam PF00884 Sulfatase 282 572 4.6E-22 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VV93_RS04125 61d367a5a06c0a57c4f0b954ba07512c 132 PANTHER PTHR10584:SF191 6 67 5.9E-16 T 23-04-2016 VV93_RS04125 61d367a5a06c0a57c4f0b954ba07512c 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 1.2E-29 T 23-04-2016 IPR006696 Protein of unknown function DUF423 VV93_RS04125 61d367a5a06c0a57c4f0b954ba07512c 132 PANTHER PTHR10584 6 67 5.9E-16 T 23-04-2016 VV93_RS09230 25d422162286aa2b407375f50dd8f3d3 401 PANTHER PTHR32195:SF17 1 397 7.7E-185 T 23-04-2016 VV93_RS09230 25d422162286aa2b407375f50dd8f3d3 401 PANTHER PTHR32195 1 397 7.7E-185 T 23-04-2016 VV93_RS09230 25d422162286aa2b407375f50dd8f3d3 401 Pfam PF03222 Tryptophan/tyrosine permease family 4 387 8.8E-112 T 23-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 VV93_RS09230 25d422162286aa2b407375f50dd8f3d3 401 PRINTS PR00166 Aromatic amino acid permease signature 313 331 4.6E-79 T 23-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VV93_RS09230 25d422162286aa2b407375f50dd8f3d3 401 PRINTS PR00166 Aromatic amino acid permease signature 183 205 4.6E-79 T 23-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VV93_RS09230 25d422162286aa2b407375f50dd8f3d3 401 PRINTS PR00166 Aromatic amino acid permease signature 149 169 4.6E-79 T 23-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VV93_RS09230 25d422162286aa2b407375f50dd8f3d3 401 PRINTS PR00166 Aromatic amino acid permease signature 38 57 4.6E-79 T 23-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VV93_RS09230 25d422162286aa2b407375f50dd8f3d3 401 PRINTS PR00166 Aromatic amino acid permease signature 222 241 4.6E-79 T 23-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VV93_RS09230 25d422162286aa2b407375f50dd8f3d3 401 PRINTS PR00166 Aromatic amino acid permease signature 279 298 4.6E-79 T 23-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VV93_RS09230 25d422162286aa2b407375f50dd8f3d3 401 PRINTS PR00166 Aromatic amino acid permease signature 334 353 4.6E-79 T 23-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VV93_RS09230 25d422162286aa2b407375f50dd8f3d3 401 PRINTS PR00166 Aromatic amino acid permease signature 83 103 4.6E-79 T 23-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VV93_RS09230 25d422162286aa2b407375f50dd8f3d3 401 PRINTS PR00166 Aromatic amino acid permease signature 11 34 4.6E-79 T 23-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VV93_RS09230 25d422162286aa2b407375f50dd8f3d3 401 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 23-04-2016 IPR013061 Tryptophan/tryrosine permease, conserved site VV93_RS09230 25d422162286aa2b407375f50dd8f3d3 401 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 377 9.4E-114 T 23-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV93_RS04935 61da07b40dfb801e7920443d212873d7 291 PANTHER PTHR30477:SF1 1 269 1.2E-73 T 23-04-2016 VV93_RS04935 61da07b40dfb801e7920443d212873d7 291 PRINTS PR00690 Adhesin family signature 50 63 2.2E-7 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VV93_RS04935 61da07b40dfb801e7920443d212873d7 291 PRINTS PR00690 Adhesin family signature 177 198 2.2E-7 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VV93_RS04935 61da07b40dfb801e7920443d212873d7 291 PRINTS PR00690 Adhesin family signature 63 80 2.2E-7 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VV93_RS04935 61da07b40dfb801e7920443d212873d7 291 PRINTS PR00690 Adhesin family signature 230 248 2.2E-7 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VV93_RS04935 61da07b40dfb801e7920443d212873d7 291 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 277 4.4E-55 T 23-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VV93_RS04935 61da07b40dfb801e7920443d212873d7 291 Gene3D G3DSA:3.40.50.1980 19 177 1.2E-43 T 23-04-2016 VV93_RS04935 61da07b40dfb801e7920443d212873d7 291 PANTHER PTHR30477 1 269 1.2E-73 T 23-04-2016 VV93_RS04935 61da07b40dfb801e7920443d212873d7 291 Gene3D G3DSA:3.40.50.1980 179 289 1.6E-25 T 23-04-2016 VV93_RS04935 61da07b40dfb801e7920443d212873d7 291 SUPERFAMILY SSF53807 20 288 7.85E-74 T 23-04-2016 VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 Gene3D G3DSA:3.30.450.20 126 197 6.7E-8 T 23-04-2016 VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 9.3E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 9.3E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 9.3E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 532 9.3E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 Gene3D G3DSA:3.40.50.2300 596 715 1.3E-34 T 23-04-2016 VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 Pfam PF00512 His Kinase A (phospho-acceptor) domain 353 417 1.9E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 SUPERFAMILY SSF52172 596 731 1.99E-32 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 SUPERFAMILY SSF55874 406 577 1.44E-44 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 SMART SM00387 464 579 3.2E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 PANTHER PTHR24423:SF382 109 141 2.3E-135 T 23-04-2016 VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 PANTHER PTHR24423:SF382 331 752 2.3E-135 T 23-04-2016 VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 Gene3D G3DSA:3.30.565.10 403 577 3.0E-46 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 PANTHER PTHR24423 109 141 2.3E-135 T 23-04-2016 VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 PANTHER PTHR24423 331 752 2.3E-135 T 23-04-2016 VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 SMART SM00448 598 712 1.8E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 Pfam PF02743 Cache domain 40 227 1.0E-12 T 23-04-2016 IPR033479 Double Cache domain 1 VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 Pfam PF00072 Response regulator receiver domain 601 712 1.9E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 465 577 8.3E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 SMART SM00388 352 417 4.3E-24 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 SUPERFAMILY SSF47384 340 418 2.75E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS10000 331b37eccc94bdf728060e28cd521b0d 805 Gene3D G3DSA:1.10.287.130 346 402 1.9E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS10275 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 23-04-2016 IPR022967 RNA-binding domain, S1 VV93_RS10275 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS10275 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 71 3.9E-39 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS10275 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VV93_RS10275 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.5E-27 T 23-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 VV93_RS10275 dcb4525c3e58b45274dc0b85d99859d5 72 PANTHER PTHR33370 1 72 2.5E-50 T 23-04-2016 VV93_RS10275 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VV93_RS05960 8a817b2f6fc3ae1b9403650ec18aa93b 377 SUPERFAMILY SSF50621 212 358 1.12E-22 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VV93_RS05960 8a817b2f6fc3ae1b9403650ec18aa93b 377 PIRSF PIRSF038941 1 372 6.0E-129 T 23-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VV93_RS05960 8a817b2f6fc3ae1b9403650ec18aa93b 377 PANTHER PTHR11482:SF38 1 377 5.6E-190 T 23-04-2016 VV93_RS05960 8a817b2f6fc3ae1b9403650ec18aa93b 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 1.1E-164 T 23-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VV93_RS05960 8a817b2f6fc3ae1b9403650ec18aa93b 377 Gene3D G3DSA:3.20.20.10 26 236 3.4E-18 T 23-04-2016 IPR029066 PLP-binding barrel VV93_RS05960 8a817b2f6fc3ae1b9403650ec18aa93b 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 261 348 5.4E-5 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 VV93_RS05960 8a817b2f6fc3ae1b9403650ec18aa93b 377 SUPERFAMILY SSF51419 14 242 4.14E-42 T 23-04-2016 IPR029066 PLP-binding barrel VV93_RS05960 8a817b2f6fc3ae1b9403650ec18aa93b 377 Gene3D G3DSA:2.40.37.10 237 348 2.3E-13 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VV93_RS05960 8a817b2f6fc3ae1b9403650ec18aa93b 377 PANTHER PTHR11482 1 377 5.6E-190 T 23-04-2016 VV93_RS01630 caa68b21f4e0d76389a40b8b41ec1630 330 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 14 313 3.9E-101 T 23-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 VV93_RS01630 caa68b21f4e0d76389a40b8b41ec1630 330 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 308 1.9E-70 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VV93_RS01630 caa68b21f4e0d76389a40b8b41ec1630 330 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 313 45.489 T 23-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 VV93_RS01630 caa68b21f4e0d76389a40b8b41ec1630 330 PIRSF PIRSF026649 12 317 1.0E-82 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VV93_RS08950 3418fae62368a888934f5d04453d4b39 1310 PANTHER PTHR18934:SF109 751 879 0.0 T 23-04-2016 VV93_RS08950 3418fae62368a888934f5d04453d4b39 1310 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 598 710 1.4E-18 T 23-04-2016 IPR011709 Domain of unknown function DUF1605 VV93_RS08950 3418fae62368a888934f5d04453d4b39 1310 Gene3D G3DSA:3.40.50.300 90 246 2.0E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08950 3418fae62368a888934f5d04453d4b39 1310 Pfam PF00271 Helicase conserved C-terminal domain 303 415 2.5E-10 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS08950 3418fae62368a888934f5d04453d4b39 1310 PANTHER PTHR18934:SF109 70 716 0.0 T 23-04-2016 VV93_RS08950 3418fae62368a888934f5d04453d4b39 1310 SMART SM00490 316 416 7.2E-15 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS08950 3418fae62368a888934f5d04453d4b39 1310 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 27 1308 0.0 T 23-04-2016 IPR010222 RNA helicase HrpA GO:0004004 VV93_RS08950 3418fae62368a888934f5d04453d4b39 1310 Pfam PF04408 Helicase associated domain (HA2) 478 569 4.2E-19 T 23-04-2016 IPR007502 Helicase-associated domain GO:0004386 VV93_RS08950 3418fae62368a888934f5d04453d4b39 1310 SMART SM00487 85 272 1.9E-29 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV93_RS08950 3418fae62368a888934f5d04453d4b39 1310 PANTHER PTHR18934 70 716 0.0 T 23-04-2016 VV93_RS08950 3418fae62368a888934f5d04453d4b39 1310 Gene3D G3DSA:3.40.50.300 285 430 1.1E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08950 3418fae62368a888934f5d04453d4b39 1310 Pfam PF11898 Domain of unknown function (DUF3418) 724 1308 3.8E-232 T 23-04-2016 IPR024590 RNA helicase HrpA, C-terminal VV93_RS08950 3418fae62368a888934f5d04453d4b39 1310 SUPERFAMILY SSF52540 87 610 1.69E-115 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08950 3418fae62368a888934f5d04453d4b39 1310 Pfam PF00270 DEAD/DEAH box helicase 101 246 2.3E-7 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV93_RS08950 3418fae62368a888934f5d04453d4b39 1310 PANTHER PTHR18934 751 879 0.0 T 23-04-2016 VV93_RS08950 3418fae62368a888934f5d04453d4b39 1310 SMART SM00847 476 571 1.4E-39 T 23-04-2016 IPR007502 Helicase-associated domain GO:0004386 VV93_RS08950 3418fae62368a888934f5d04453d4b39 1310 SMART SM00382 105 396 3.8E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS06390 acc3f8d27323bf4cbc1d02771273b2df 227 PANTHER PTHR21343:SF13 1 226 1.5E-119 T 23-04-2016 VV93_RS06390 acc3f8d27323bf4cbc1d02771273b2df 227 PANTHER PTHR21343 1 226 1.5E-119 T 23-04-2016 VV93_RS06390 acc3f8d27323bf4cbc1d02771273b2df 227 PIRSF PIRSF006755 1 227 2.2E-79 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 VV93_RS06390 acc3f8d27323bf4cbc1d02771273b2df 227 Gene3D G3DSA:3.40.50.300 1 215 2.6E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06390 acc3f8d27323bf4cbc1d02771273b2df 227 Pfam PF13500 AAA domain 4 211 5.0E-40 T 23-04-2016 VV93_RS06390 acc3f8d27323bf4cbc1d02771273b2df 227 SUPERFAMILY SSF52540 2 213 6.2E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06390 acc3f8d27323bf4cbc1d02771273b2df 227 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 5.9E-54 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 VV93_RS06390 acc3f8d27323bf4cbc1d02771273b2df 227 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 30.083 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 VV93_RS07895 7bb656c3c7ff58637cb974ad6817259d 364 Pfam PF02486 Replication initiation factor 166 327 2.1E-17 T 23-04-2016 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 VV93_RS09215 2eb5f09127002aa6b25a3b0c2096e5d3 157 PANTHER PTHR30295 1 157 1.8E-58 T 23-04-2016 VV93_RS09215 2eb5f09127002aa6b25a3b0c2096e5d3 157 Pfam PF00210 Ferritin-like domain 19 157 4.3E-25 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VV93_RS09215 2eb5f09127002aa6b25a3b0c2096e5d3 157 ProSitePatterns PS00818 Dps protein family signature 1. 39 55 - T 23-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 VV93_RS09215 2eb5f09127002aa6b25a3b0c2096e5d3 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 134 152 3.8E-13 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 VV93_RS09215 2eb5f09127002aa6b25a3b0c2096e5d3 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 39 55 3.8E-13 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 VV93_RS09215 2eb5f09127002aa6b25a3b0c2096e5d3 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 63 79 3.8E-13 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 VV93_RS09215 2eb5f09127002aa6b25a3b0c2096e5d3 157 ProSitePatterns PS00819 Dps protein family signature 2. 65 79 - T 23-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 VV93_RS09215 2eb5f09127002aa6b25a3b0c2096e5d3 157 PANTHER PTHR30295:SF6 1 157 1.8E-58 T 23-04-2016 VV93_RS09215 2eb5f09127002aa6b25a3b0c2096e5d3 157 SUPERFAMILY SSF47240 4 157 4.06E-43 T 23-04-2016 IPR009078 Ferritin-like superfamily VV93_RS09215 2eb5f09127002aa6b25a3b0c2096e5d3 157 PIRSF PIRSF005900 1 157 1.3E-44 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 VV93_RS09215 2eb5f09127002aa6b25a3b0c2096e5d3 157 Gene3D G3DSA:1.20.1260.10 4 157 1.1E-56 T 23-04-2016 IPR012347 Ferritin-related VV93_RS05325 20d6de8cb1cc5606e4299552a1a93591 288 SUPERFAMILY SSF52096 19 284 8.11E-79 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS05325 20d6de8cb1cc5606e4299552a1a93591 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 2.0E-146 T 23-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VV93_RS05325 20d6de8cb1cc5606e4299552a1a93591 288 Gene3D G3DSA:1.10.12.10 226 276 5.4E-31 T 23-04-2016 IPR014748 Crontonase, C-terminal VV93_RS05325 20d6de8cb1cc5606e4299552a1a93591 288 Gene3D G3DSA:3.90.226.10 25 225 7.3E-70 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS05325 20d6de8cb1cc5606e4299552a1a93591 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 VV93_RS05325 20d6de8cb1cc5606e4299552a1a93591 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 3.6E-78 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 VV93_RS05325 20d6de8cb1cc5606e4299552a1a93591 288 PANTHER PTHR11941:SF20 12 281 1.4E-194 T 23-04-2016 VV93_RS05325 20d6de8cb1cc5606e4299552a1a93591 288 PANTHER PTHR11941 12 281 1.4E-194 T 23-04-2016 VV93_RS05325 20d6de8cb1cc5606e4299552a1a93591 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.637 T 23-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VV93_RS20735 3046bb04c2664e6e8f08f1333196bbc2 138 Pfam PF00994 Probable molybdopterin binding domain 1 132 4.0E-23 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS20735 3046bb04c2664e6e8f08f1333196bbc2 138 Gene3D G3DSA:3.40.980.10 1 123 6.5E-18 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS20735 3046bb04c2664e6e8f08f1333196bbc2 138 SUPERFAMILY SSF53218 1 124 1.44E-23 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS20735 3046bb04c2664e6e8f08f1333196bbc2 138 PANTHER PTHR13939 1 137 8.1E-74 T 23-04-2016 VV93_RS20735 3046bb04c2664e6e8f08f1333196bbc2 138 SMART SM00852 1 138 1.2E-9 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS20735 3046bb04c2664e6e8f08f1333196bbc2 138 PANTHER PTHR13939:SF3 1 137 8.1E-74 T 23-04-2016 VV93_RS02705 f11a440bfd8c53dd36299f30471238cd 355 PANTHER PTHR22939 1 352 2.9E-158 T 23-04-2016 VV93_RS02705 f11a440bfd8c53dd36299f30471238cd 355 PRINTS PR00834 HtrA/DegQ protease family signature 91 103 9.4E-46 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV93_RS02705 f11a440bfd8c53dd36299f30471238cd 355 PRINTS PR00834 HtrA/DegQ protease family signature 112 132 9.4E-46 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV93_RS02705 f11a440bfd8c53dd36299f30471238cd 355 PRINTS PR00834 HtrA/DegQ protease family signature 152 176 9.4E-46 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV93_RS02705 f11a440bfd8c53dd36299f30471238cd 355 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 9.4E-46 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV93_RS02705 f11a440bfd8c53dd36299f30471238cd 355 PRINTS PR00834 HtrA/DegQ protease family signature 187 204 9.4E-46 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV93_RS02705 f11a440bfd8c53dd36299f30471238cd 355 PRINTS PR00834 HtrA/DegQ protease family signature 209 226 9.4E-46 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV93_RS02705 f11a440bfd8c53dd36299f30471238cd 355 SUPERFAMILY SSF50494 43 266 1.8E-62 T 23-04-2016 IPR009003 Peptidase S1, PA clan VV93_RS02705 f11a440bfd8c53dd36299f30471238cd 355 SMART SM00228 257 339 6.3E-7 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS02705 f11a440bfd8c53dd36299f30471238cd 355 Gene3D G3DSA:2.40.10.10 146 258 6.4E-39 T 23-04-2016 VV93_RS02705 f11a440bfd8c53dd36299f30471238cd 355 SUPERFAMILY SSF50156 240 347 6.97E-21 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS02705 f11a440bfd8c53dd36299f30471238cd 355 Pfam PF13365 Trypsin-like peptidase domain 82 216 1.7E-32 T 23-04-2016 VV93_RS02705 f11a440bfd8c53dd36299f30471238cd 355 Gene3D G3DSA:2.30.42.10 259 352 1.8E-24 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS02705 f11a440bfd8c53dd36299f30471238cd 355 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 352 8.0E-168 T 23-04-2016 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 VV93_RS02705 f11a440bfd8c53dd36299f30471238cd 355 Gene3D G3DSA:2.40.10.10 39 145 1.9E-34 T 23-04-2016 VV93_RS02705 f11a440bfd8c53dd36299f30471238cd 355 Pfam PF13180 PDZ domain 258 347 3.2E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS02705 f11a440bfd8c53dd36299f30471238cd 355 PANTHER PTHR22939:SF93 1 352 2.9E-158 T 23-04-2016 VV93_RS10430 6963a1ccfff1546b75233e6ea5b98a34 262 Pfam PF00990 Diguanylate cyclase, GGDEF domain 132 262 8.8E-21 T 23-04-2016 IPR000160 GGDEF domain VV93_RS10430 6963a1ccfff1546b75233e6ea5b98a34 262 SMART SM00267 120 261 4.0E-19 T 23-04-2016 IPR000160 GGDEF domain VV93_RS10430 6963a1ccfff1546b75233e6ea5b98a34 262 SUPERFAMILY SSF55073 136 262 3.3E-26 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS10430 6963a1ccfff1546b75233e6ea5b98a34 262 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 132 262 3.8E-20 T 23-04-2016 IPR000160 GGDEF domain VV93_RS10430 6963a1ccfff1546b75233e6ea5b98a34 262 Gene3D G3DSA:3.30.70.270 133 262 1.8E-23 T 23-04-2016 VV93_RS12850 b888679212586fdca086b174896e19fc 225 Pfam PF14622 Ribonuclease-III-like 18 142 2.3E-34 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VV93_RS12850 b888679212586fdca086b174896e19fc 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VV93_RS12850 b888679212586fdca086b174896e19fc 225 Gene3D G3DSA:3.30.160.20 152 223 3.8E-27 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain VV93_RS12850 b888679212586fdca086b174896e19fc 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 222 3.0E-75 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 VV93_RS12850 b888679212586fdca086b174896e19fc 225 PANTHER PTHR11207 1 222 5.5E-104 T 23-04-2016 VV93_RS12850 b888679212586fdca086b174896e19fc 225 SUPERFAMILY SSF54768 108 222 4.24E-28 T 23-04-2016 VV93_RS12850 b888679212586fdca086b174896e19fc 225 SMART SM00358 155 223 8.9E-22 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain VV93_RS12850 b888679212586fdca086b174896e19fc 225 SMART SM00535 20 148 4.4E-57 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VV93_RS12850 b888679212586fdca086b174896e19fc 225 SUPERFAMILY SSF69065 4 158 1.1E-50 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VV93_RS12850 b888679212586fdca086b174896e19fc 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.378 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 VV93_RS12850 b888679212586fdca086b174896e19fc 225 Gene3D G3DSA:1.10.1520.10 5 146 1.4E-48 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VV93_RS12850 b888679212586fdca086b174896e19fc 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 3.3E-15 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain VV93_RS02425 f22ed5a56bcdd916402f55596642e2ca 650 Gene3D G3DSA:3.40.930.10 507 646 9.0E-43 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VV93_RS02425 f22ed5a56bcdd916402f55596642e2ca 650 PANTHER PTHR30181:SF2 1 621 0.0 T 23-04-2016 VV93_RS02425 f22ed5a56bcdd916402f55596642e2ca 650 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 1.1E-166 T 23-04-2016 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 VV93_RS02425 f22ed5a56bcdd916402f55596642e2ca 650 SUPERFAMILY SSF55804 506 646 7.19E-40 T 23-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 VV93_RS02425 f22ed5a56bcdd916402f55596642e2ca 650 PANTHER PTHR30181 1 621 0.0 T 23-04-2016 VV93_RS02425 f22ed5a56bcdd916402f55596642e2ca 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 507 645 1.3E-33 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VV93_RS02425 f22ed5a56bcdd916402f55596642e2ca 650 SUPERFAMILY SSF52794 385 471 6.45E-25 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VV93_RS02425 f22ed5a56bcdd916402f55596642e2ca 650 Gene3D G3DSA:3.40.50.10370 382 475 1.3E-41 T 23-04-2016 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 VV93_RS02425 f22ed5a56bcdd916402f55596642e2ca 650 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 386 467 5.3E-12 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VV93_RS02425 f22ed5a56bcdd916402f55596642e2ca 650 Pfam PF02378 Phosphotransferase system, EIIC 18 278 5.9E-19 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VV93_RS02425 f22ed5a56bcdd916402f55596642e2ca 650 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 550 566 - T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VV93_RS09705 82fb23314a8e5b743f3e9709ddf887c0 331 SUPERFAMILY SSF51735 103 299 1.17E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS09705 82fb23314a8e5b743f3e9709ddf887c0 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 328 2.5E-34 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 VV93_RS09705 82fb23314a8e5b743f3e9709ddf887c0 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VV93_RS09705 82fb23314a8e5b743f3e9709ddf887c0 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VV93_RS09705 82fb23314a8e5b743f3e9709ddf887c0 331 PANTHER PTHR10996 1 329 2.5E-164 T 23-04-2016 VV93_RS09705 82fb23314a8e5b743f3e9709ddf887c0 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 1.0E-50 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VV93_RS09705 82fb23314a8e5b743f3e9709ddf887c0 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VV93_RS09705 82fb23314a8e5b743f3e9709ddf887c0 331 PANTHER PTHR10996:SF161 1 329 2.5E-164 T 23-04-2016 VV93_RS09705 82fb23314a8e5b743f3e9709ddf887c0 331 Gene3D G3DSA:3.40.50.720 139 305 1.6E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS09705 82fb23314a8e5b743f3e9709ddf887c0 331 Gene3D G3DSA:3.40.50.720 1 138 7.2E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS09705 82fb23314a8e5b743f3e9709ddf887c0 331 SUPERFAMILY SSF52283 1 136 6.8E-42 T 23-04-2016 VV93_RS11305 38cb592cdfa2784f51dd0f0e0ad8e026 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.875 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 VV93_RS11305 38cb592cdfa2784f51dd0f0e0ad8e026 212 Gene3D G3DSA:3.40.50.170 1 194 4.6E-72 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV93_RS11305 38cb592cdfa2784f51dd0f0e0ad8e026 212 PANTHER PTHR10520 1 194 4.5E-108 T 23-04-2016 VV93_RS11305 38cb592cdfa2784f51dd0f0e0ad8e026 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 23-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV93_RS11305 38cb592cdfa2784f51dd0f0e0ad8e026 212 SUPERFAMILY SSF53328 2 194 1.18E-66 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV93_RS11305 38cb592cdfa2784f51dd0f0e0ad8e026 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 191 1.0E-77 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 VV93_RS11305 38cb592cdfa2784f51dd0f0e0ad8e026 212 Pfam PF00551 Formyl transferase 2 182 5.5E-66 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV93_RS02760 07d1b4a1641d11f62859f56140b3534c 197 SMART SM00749 48 111 40.0 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria VV93_RS02760 07d1b4a1641d11f62859f56140b3534c 197 SMART SM00749 125 188 1.9E-5 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria VV93_RS02760 07d1b4a1641d11f62859f56140b3534c 197 Pfam PF04972 BON domain 120 185 3.6E-19 T 23-04-2016 IPR007055 BON domain VV93_RS02760 07d1b4a1641d11f62859f56140b3534c 197 Pfam PF04972 BON domain 44 110 3.2E-10 T 23-04-2016 IPR007055 BON domain VV93_RS02760 07d1b4a1641d11f62859f56140b3534c 197 PANTHER PTHR34606:SF4 1 185 2.5E-72 T 23-04-2016 VV93_RS02760 07d1b4a1641d11f62859f56140b3534c 197 PANTHER PTHR34606 1 185 2.5E-72 T 23-04-2016 VV93_RS09670 bd683f23a03717a87e408d80c28814ea 807 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 374 536 4.8E-39 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09670 bd683f23a03717a87e408d80c28814ea 807 Gene3D G3DSA:3.20.20.450 552 801 1.1E-85 T 23-04-2016 IPR001633 EAL domain VV93_RS09670 bd683f23a03717a87e408d80c28814ea 807 SUPERFAMILY SSF55073 382 540 3.77E-44 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS09670 bd683f23a03717a87e408d80c28814ea 807 PANTHER PTHR33121:SF13 533 807 6.9E-75 T 23-04-2016 VV93_RS09670 bd683f23a03717a87e408d80c28814ea 807 SUPERFAMILY SSF141868 553 799 1.26E-81 T 23-04-2016 IPR001633 EAL domain VV93_RS09670 bd683f23a03717a87e408d80c28814ea 807 Gene3D G3DSA:3.30.450.20 43 199 2.4E-38 T 23-04-2016 VV93_RS09670 bd683f23a03717a87e408d80c28814ea 807 Gene3D G3DSA:3.30.450.20 201 305 2.3E-18 T 23-04-2016 VV93_RS09670 bd683f23a03717a87e408d80c28814ea 807 SMART SM00267 366 538 1.8E-62 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09670 bd683f23a03717a87e408d80c28814ea 807 Gene3D G3DSA:3.30.70.270 379 546 2.7E-52 T 23-04-2016 VV93_RS09670 bd683f23a03717a87e408d80c28814ea 807 Pfam PF00990 Diguanylate cyclase, GGDEF domain 377 533 3.7E-42 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09670 bd683f23a03717a87e408d80c28814ea 807 SMART SM00052 548 794 4.4E-98 T 23-04-2016 IPR001633 EAL domain VV93_RS09670 bd683f23a03717a87e408d80c28814ea 807 SMART SM01049 50 143 1.7E-23 T 23-04-2016 IPR033480 Single Cache domain 2 VV93_RS09670 bd683f23a03717a87e408d80c28814ea 807 PANTHER PTHR33121 533 807 6.9E-75 T 23-04-2016 VV93_RS09670 bd683f23a03717a87e408d80c28814ea 807 Pfam PF00563 EAL domain 554 789 1.1E-65 T 23-04-2016 IPR001633 EAL domain VV93_RS09670 bd683f23a03717a87e408d80c28814ea 807 Pfam PF08269 Cache domain 13 305 4.2E-88 T 23-04-2016 IPR004010 Double Cache domain 2 VV93_RS06420 d497aa384a932f8b00a2ff292121dc94 418 PIRSF PIRSF003085 24 418 2.2E-122 T 23-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 VV93_RS06420 d497aa384a932f8b00a2ff292121dc94 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 143 411 9.2E-85 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS06420 d497aa384a932f8b00a2ff292121dc94 418 Gene3D G3DSA:3.40.50.150 139 416 4.2E-99 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS06420 d497aa384a932f8b00a2ff292121dc94 418 PANTHER PTHR10108:SF795 73 331 4.1E-114 T 23-04-2016 VV93_RS06420 d497aa384a932f8b00a2ff292121dc94 418 PANTHER PTHR10108:SF795 349 417 4.1E-114 T 23-04-2016 VV93_RS06420 d497aa384a932f8b00a2ff292121dc94 418 SUPERFAMILY SSF53335 20 371 3.01E-91 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS06420 d497aa384a932f8b00a2ff292121dc94 418 PANTHER PTHR10108 73 331 4.1E-114 T 23-04-2016 VV93_RS06420 d497aa384a932f8b00a2ff292121dc94 418 PANTHER PTHR10108 349 417 4.1E-114 T 23-04-2016 VV93_RS01590 d7bc121821f36232a4972baad7f5f0d2 353 Gene3D G3DSA:3.10.580.10 6 111 1.5E-24 T 23-04-2016 VV93_RS01590 d7bc121821f36232a4972baad7f5f0d2 353 Gene3D G3DSA:3.90.550.10 125 347 1.5E-63 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS01590 d7bc121821f36232a4972baad7f5f0d2 353 SUPERFAMILY SSF54631 6 56 4.24E-9 T 23-04-2016 VV93_RS01590 d7bc121821f36232a4972baad7f5f0d2 353 PANTHER PTHR22572 122 350 3.7E-130 T 23-04-2016 VV93_RS01590 d7bc121821f36232a4972baad7f5f0d2 353 PANTHER PTHR22572:SF114 122 350 3.7E-130 T 23-04-2016 VV93_RS01590 d7bc121821f36232a4972baad7f5f0d2 353 SMART SM00116 6 54 0.002 T 23-04-2016 IPR000644 CBS domain VV93_RS01590 d7bc121821f36232a4972baad7f5f0d2 353 SMART SM00116 70 118 1.7 T 23-04-2016 IPR000644 CBS domain VV93_RS01590 d7bc121821f36232a4972baad7f5f0d2 353 Pfam PF00483 Nucleotidyl transferase 125 347 1.9E-37 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VV93_RS01590 d7bc121821f36232a4972baad7f5f0d2 353 Pfam PF00571 CBS domain 9 54 3.6E-8 T 23-04-2016 IPR000644 CBS domain VV93_RS01590 d7bc121821f36232a4972baad7f5f0d2 353 SUPERFAMILY SSF53448 48 347 1.48E-69 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS14070 072a2db915b7d18f3991b5f5cab88f95 600 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 598 47.856 T 23-04-2016 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 VV93_RS14070 072a2db915b7d18f3991b5f5cab88f95 600 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 283 2.2E-82 T 23-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 VV93_RS14070 072a2db915b7d18f3991b5f5cab88f95 600 PANTHER PTHR16254:SF6 1 556 2.1E-242 T 23-04-2016 VV93_RS14070 072a2db915b7d18f3991b5f5cab88f95 600 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 5.1E-7 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VV93_RS14070 072a2db915b7d18f3991b5f5cab88f95 600 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 5.1E-7 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VV93_RS14070 072a2db915b7d18f3991b5f5cab88f95 600 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 5.1E-7 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VV93_RS14070 072a2db915b7d18f3991b5f5cab88f95 600 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 5.1E-7 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VV93_RS14070 072a2db915b7d18f3991b5f5cab88f95 600 SUPERFAMILY SSF51735 401 529 1.31E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS14070 072a2db915b7d18f3991b5f5cab88f95 600 Pfam PF00999 Sodium/hydrogen exchanger family 12 372 2.1E-66 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VV93_RS14070 072a2db915b7d18f3991b5f5cab88f95 600 PANTHER PTHR16254 1 556 2.1E-242 T 23-04-2016 VV93_RS14070 072a2db915b7d18f3991b5f5cab88f95 600 Pfam PF02254 TrkA-N domain 402 512 8.5E-23 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VV93_RS14070 072a2db915b7d18f3991b5f5cab88f95 600 Gene3D G3DSA:3.40.50.720 397 530 1.7E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS03265 ea7f3d983d648b94cffaf27b815d66d3 392 SUPERFAMILY SSF48600 7 95 4.4E-19 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VV93_RS03265 ea7f3d983d648b94cffaf27b815d66d3 392 Gene3D G3DSA:3.30.70.260 299 382 1.7E-27 T 23-04-2016 VV93_RS03265 ea7f3d983d648b94cffaf27b815d66d3 392 SUPERFAMILY SSF53850 109 294 1.52E-54 T 23-04-2016 VV93_RS03265 ea7f3d983d648b94cffaf27b815d66d3 392 Gene3D G3DSA:3.40.190.10 198 277 6.1E-26 T 23-04-2016 VV93_RS03265 ea7f3d983d648b94cffaf27b815d66d3 392 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 329 336 - T 23-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VV93_RS03265 ea7f3d983d648b94cffaf27b815d66d3 392 SUPERFAMILY SSF55021 284 381 1.37E-25 T 23-04-2016 VV93_RS03265 ea7f3d983d648b94cffaf27b815d66d3 392 Gene3D G3DSA:1.20.59.10 4 110 3.0E-41 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VV93_RS03265 ea7f3d983d648b94cffaf27b815d66d3 392 PANTHER PTHR21022 8 383 3.7E-156 T 23-04-2016 VV93_RS03265 ea7f3d983d648b94cffaf27b815d66d3 392 PANTHER PTHR21022:SF0 8 383 3.7E-156 T 23-04-2016 VV93_RS03265 ea7f3d983d648b94cffaf27b815d66d3 392 Gene3D G3DSA:3.40.190.10 111 197 3.9E-31 T 23-04-2016 VV93_RS03265 ea7f3d983d648b94cffaf27b815d66d3 392 PIRSF PIRSF001500 1 384 4.1E-141 T 23-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VV93_RS03265 ea7f3d983d648b94cffaf27b815d66d3 392 Pfam PF01817 Chorismate mutase type II 12 91 8.7E-17 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VV93_RS03265 ea7f3d983d648b94cffaf27b815d66d3 392 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 265 287 - T 23-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VV93_RS03265 ea7f3d983d648b94cffaf27b815d66d3 392 SMART SM00830 12 93 1.4E-21 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VV93_RS03265 ea7f3d983d648b94cffaf27b815d66d3 392 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 9 91 1.5E-28 T 23-04-2016 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 VV93_RS03265 ea7f3d983d648b94cffaf27b815d66d3 392 Pfam PF00800 Prephenate dehydratase 110 291 7.1E-58 T 23-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VV93_RS03270 3ed59c0ba6cb6cb0adb461c566a78bea 107 PANTHER PTHR33231 1 100 7.3E-51 T 23-04-2016 VV93_RS03270 3ed59c0ba6cb6cb0adb461c566a78bea 107 SUPERFAMILY SSF69754 1 102 1.09E-29 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VV93_RS03270 3ed59c0ba6cb6cb0adb461c566a78bea 107 PANTHER PTHR33231:SF3 1 100 7.3E-51 T 23-04-2016 VV93_RS03270 3ed59c0ba6cb6cb0adb461c566a78bea 107 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 2.5E-22 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VV93_RS03270 3ed59c0ba6cb6cb0adb461c566a78bea 107 Gene3D G3DSA:3.30.160.100 2 92 2.2E-30 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VV93_RS03270 3ed59c0ba6cb6cb0adb461c566a78bea 107 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 7.7E-31 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VV93_RS12955 5662f1d48d2410929b59934af3c346af 298 SUPERFAMILY SSF53850 95 295 4.52E-21 T 23-04-2016 VV93_RS12955 5662f1d48d2410929b59934af3c346af 298 Gene3D G3DSA:3.40.190.10 93 198 2.2E-39 T 23-04-2016 VV93_RS12955 5662f1d48d2410929b59934af3c346af 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 295 1.2E-106 T 23-04-2016 IPR017685 HTH-type transcriptional regulator ArgP VV93_RS12955 5662f1d48d2410929b59934af3c346af 298 PANTHER PTHR30579:SF2 1 296 4.7E-135 T 23-04-2016 VV93_RS12955 5662f1d48d2410929b59934af3c346af 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.4E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS12955 5662f1d48d2410929b59934af3c346af 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.4E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS12955 5662f1d48d2410929b59934af3c346af 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.4E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS12955 5662f1d48d2410929b59934af3c346af 298 Gene3D G3DSA:1.10.10.10 4 74 1.3E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS12955 5662f1d48d2410929b59934af3c346af 298 PANTHER PTHR30579 1 296 4.7E-135 T 23-04-2016 VV93_RS12955 5662f1d48d2410929b59934af3c346af 298 Pfam PF03466 LysR substrate binding domain 95 274 2.0E-12 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS12955 5662f1d48d2410929b59934af3c346af 298 SUPERFAMILY SSF46785 4 113 1.4E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS12955 5662f1d48d2410929b59934af3c346af 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 1.2E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS12955 5662f1d48d2410929b59934af3c346af 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 54.759 T 23-04-2016 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 PANTHER PTHR22912 1 461 4.1E-279 T 23-04-2016 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.4E-28 T 23-04-2016 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.4E-28 T 23-04-2016 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 2.4E-28 T 23-04-2016 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 2.4E-28 T 23-04-2016 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.4E-28 T 23-04-2016 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 SUPERFAMILY SSF51905 5 319 2.35E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 PIRSF PIRSF000350 1 463 4.4E-71 T 23-04-2016 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 SUPERFAMILY SSF55424 344 463 1.89E-30 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 Gene3D G3DSA:3.50.50.60 145 334 4.3E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 4.0E-60 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 7.3E-52 T 23-04-2016 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 7.3E-52 T 23-04-2016 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 7.3E-52 T 23-04-2016 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 7.3E-52 T 23-04-2016 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 7.3E-52 T 23-04-2016 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 7.3E-52 T 23-04-2016 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 7.3E-52 T 23-04-2016 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 7.3E-52 T 23-04-2016 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 7.3E-52 T 23-04-2016 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 2.8E-30 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 PANTHER PTHR22912:SF93 1 461 4.1E-279 T 23-04-2016 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 Gene3D G3DSA:3.30.390.30 345 460 3.2E-33 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 65.336 T 23-04-2016 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 VV93_RS00620 1dc51d1e3c87f631ee57c7295b0b175e 466 Gene3D G3DSA:3.50.50.60 5 144 9.0E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 SMART SM00387 483 592 5.6E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 485 589 1.2E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 Gene3D G3DSA:3.30.450.20 97 176 2.9E-6 T 23-04-2016 VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 SUPERFAMILY SSF103190 48 187 9.42E-31 T 23-04-2016 IPR029151 Periplasmic sensor domain-like VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 SUPERFAMILY SSF47384 367 440 2.94E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 SUPERFAMILY SSF55874 440 590 1.22E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 SMART SM00388 372 440 2.5E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 PIRSF PIRSF036431 1 595 4.6E-205 T 23-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 PANTHER PTHR24423 349 591 2.4E-137 T 23-04-2016 VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 PANTHER PTHR24423 82 179 2.4E-137 T 23-04-2016 VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 PANTHER PTHR24423:SF451 349 591 2.4E-137 T 23-04-2016 VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 PANTHER PTHR24423:SF451 82 179 2.4E-137 T 23-04-2016 VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 440 9.9E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 Gene3D G3DSA:3.30.565.10 447 589 4.1E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 9.9E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 9.9E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 9.9E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 9.9E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 Pfam PF02743 Cache domain 34 271 1.2E-13 T 23-04-2016 IPR033479 Double Cache domain 1 VV93_RS05245 1f07fa34a56418a9ee1a4d2322a83235 595 Gene3D G3DSA:1.10.287.130 373 436 3.6E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS01940 f982166ecb1d816ae490a286a8e6680e 206 PANTHER PTHR10516:SF320 86 205 7.5E-62 T 23-04-2016 VV93_RS01940 f982166ecb1d816ae490a286a8e6680e 206 PANTHER PTHR10516:SF320 19 44 7.5E-62 T 23-04-2016 VV93_RS01940 f982166ecb1d816ae490a286a8e6680e 206 SUPERFAMILY SSF54534 7 205 5.89E-54 T 23-04-2016 VV93_RS01940 f982166ecb1d816ae490a286a8e6680e 206 PANTHER PTHR10516 86 205 7.5E-62 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VV93_RS01940 f982166ecb1d816ae490a286a8e6680e 206 PANTHER PTHR10516 19 44 7.5E-62 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VV93_RS01940 f982166ecb1d816ae490a286a8e6680e 206 Gene3D G3DSA:3.10.50.40 88 205 7.3E-49 T 23-04-2016 VV93_RS01940 f982166ecb1d816ae490a286a8e6680e 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 203 4.3E-26 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VV93_RS01940 f982166ecb1d816ae490a286a8e6680e 206 Gene3D G3DSA:1.10.287.460 4 87 6.0E-22 T 23-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VV93_RS01940 f982166ecb1d816ae490a286a8e6680e 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 6.5E-22 T 23-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VV93_RS03485 0bbcc32f3e6531783cbac04d45aa5f21 544 SUPERFAMILY SSF51645 18 543 1.96E-188 T 23-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VV93_RS03485 0bbcc32f3e6531783cbac04d45aa5f21 544 Pfam PF01274 Malate synthase 23 543 2.5E-199 T 23-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VV93_RS03485 0bbcc32f3e6531783cbac04d45aa5f21 544 ProSitePatterns PS00510 Malate synthase signature. 277 292 - T 23-04-2016 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VV93_RS03485 0bbcc32f3e6531783cbac04d45aa5f21 544 PANTHER PTHR21631 6 543 1.8E-280 T 23-04-2016 VV93_RS03485 0bbcc32f3e6531783cbac04d45aa5f21 544 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 34 543 5.7E-264 T 23-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VV93_RS03485 0bbcc32f3e6531783cbac04d45aa5f21 544 PIRSF PIRSF001363 12 544 8.0E-255 T 23-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VV93_RS03485 0bbcc32f3e6531783cbac04d45aa5f21 544 PANTHER PTHR21631:SF1 6 543 1.8E-280 T 23-04-2016 VV93_RS03485 0bbcc32f3e6531783cbac04d45aa5f21 544 Gene3D G3DSA:1.20.1220.12 426 537 1.9E-36 T 23-04-2016 VV93_RS03485 0bbcc32f3e6531783cbac04d45aa5f21 544 Gene3D G3DSA:3.20.20.360 83 425 9.9E-118 T 23-04-2016 VV93_RS10610 704950e0fae3b6e7bfeb5c0a3beb668f 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 3.9E-68 T 23-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VV93_RS10610 704950e0fae3b6e7bfeb5c0a3beb668f 285 PANTHER PTHR10025 1 283 3.9E-173 T 23-04-2016 VV93_RS10610 704950e0fae3b6e7bfeb5c0a3beb668f 285 Gene3D G3DSA:3.40.192.10 7 140 7.0E-50 T 23-04-2016 VV93_RS10610 704950e0fae3b6e7bfeb5c0a3beb668f 285 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VV93_RS10610 704950e0fae3b6e7bfeb5c0a3beb668f 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.04 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VV93_RS10610 704950e0fae3b6e7bfeb5c0a3beb668f 285 SUPERFAMILY SSF51735 123 280 1.06E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS10610 704950e0fae3b6e7bfeb5c0a3beb668f 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VV93_RS10610 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 2.98E-88 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VV93_RS10610 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 2.98E-88 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VV93_RS10610 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 2.98E-88 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VV93_RS10610 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 2.98E-88 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VV93_RS10610 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 2.98E-88 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VV93_RS10610 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 2.98E-88 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VV93_RS10610 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 2.98E-88 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VV93_RS10610 704950e0fae3b6e7bfeb5c0a3beb668f 285 SUPERFAMILY SSF53223 1 122 1.25E-39 T 23-04-2016 VV93_RS10610 704950e0fae3b6e7bfeb5c0a3beb668f 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 6.2E-39 T 23-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VV93_RS10610 704950e0fae3b6e7bfeb5c0a3beb668f 285 Gene3D G3DSA:3.40.50.720 141 264 3.9E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS12290 f4c0094492eca7845712e696ed5607e5 476 Gene3D G3DSA:3.40.710.10 221 446 3.5E-60 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS12290 f4c0094492eca7845712e696ed5607e5 476 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 36 451 4.3E-98 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV93_RS12290 f4c0094492eca7845712e696ed5607e5 476 PANTHER PTHR30023 30 467 1.8E-95 T 23-04-2016 VV93_RS12290 f4c0094492eca7845712e696ed5607e5 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 279 301 3.3E-26 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV93_RS12290 f4c0094492eca7845712e696ed5607e5 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 417 430 3.3E-26 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV93_RS12290 f4c0094492eca7845712e696ed5607e5 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 62 81 3.3E-26 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV93_RS12290 f4c0094492eca7845712e696ed5607e5 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 353 367 3.3E-26 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV93_RS12290 f4c0094492eca7845712e696ed5607e5 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 338 352 3.3E-26 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV93_RS12290 f4c0094492eca7845712e696ed5607e5 476 SUPERFAMILY SSF56601 30 466 2.67E-84 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS12290 f4c0094492eca7845712e696ed5607e5 476 PANTHER PTHR30023:SF0 30 467 1.8E-95 T 23-04-2016 VV93_RS12290 f4c0094492eca7845712e696ed5607e5 476 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 48 439 5.1E-98 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV93_RS13345 58a6d4073ff89f28cd8f93d11e2e4d49 158 PANTHER PTHR36115 1 156 1.3E-55 T 23-04-2016 VV93_RS13345 58a6d4073ff89f28cd8f93d11e2e4d49 158 Pfam PF06271 RDD family 9 148 1.2E-21 T 23-04-2016 IPR010432 RDD VV93_RS13345 58a6d4073ff89f28cd8f93d11e2e4d49 158 PANTHER PTHR36115:SF2 1 156 1.3E-55 T 23-04-2016 VV93_RS13025 12ce290505dce7b97c37ee22056633e8 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 179.225 T 23-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VV93_RS13025 12ce290505dce7b97c37ee22056633e8 317 PANTHER PTHR21621 1 316 6.8E-163 T 23-04-2016 VV93_RS13025 12ce290505dce7b97c37ee22056633e8 317 SUPERFAMILY SSF56059 123 313 1.7E-58 T 23-04-2016 VV93_RS13025 12ce290505dce7b97c37ee22056633e8 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 3.8E-140 T 23-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VV93_RS13025 12ce290505dce7b97c37ee22056633e8 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 9.5E-80 T 23-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VV93_RS13025 12ce290505dce7b97c37ee22056633e8 317 PANTHER PTHR21621:SF4 1 316 6.8E-163 T 23-04-2016 VV93_RS13025 12ce290505dce7b97c37ee22056633e8 317 Gene3D G3DSA:3.30.470.20 192 299 2.6E-49 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VV93_RS13025 12ce290505dce7b97c37ee22056633e8 317 Gene3D G3DSA:3.40.50.20 2 129 6.1E-57 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS13025 12ce290505dce7b97c37ee22056633e8 317 Gene3D G3DSA:3.30.1490.20 137 191 3.4E-31 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VV93_RS13025 12ce290505dce7b97c37ee22056633e8 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 1.7E-48 T 23-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VV93_RS13025 12ce290505dce7b97c37ee22056633e8 317 SUPERFAMILY SSF52440 2 122 6.91E-47 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS07555 55097f22721eff887e42d1fe9bbe5d5d 324 SUPERFAMILY SSF111369 38 123 5.75E-8 T 23-04-2016 VV93_RS07555 55097f22721eff887e42d1fe9bbe5d5d 324 PANTHER PTHR30438 7 324 7.1E-118 T 23-04-2016 VV93_RS07555 55097f22721eff887e42d1fe9bbe5d5d 324 PANTHER PTHR30438:SF1 7 324 7.1E-118 T 23-04-2016 VV93_RS07555 55097f22721eff887e42d1fe9bbe5d5d 324 Pfam PF13533 Biotin-lipoyl like 45 89 8.5E-10 T 23-04-2016 VV93_RS07555 55097f22721eff887e42d1fe9bbe5d5d 324 Pfam PF13437 HlyD family secretion protein 206 281 6.8E-5 T 23-04-2016 VV93_RS07555 55097f22721eff887e42d1fe9bbe5d5d 324 Gene3D G3DSA:2.40.50.100 42 76 7.5E-12 T 23-04-2016 VV93_RS07555 55097f22721eff887e42d1fe9bbe5d5d 324 Gene3D G3DSA:2.40.50.100 203 237 7.5E-12 T 23-04-2016 VV93_RS14235 e1d35e5be6a668ea21a6f3439d7afc68 373 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 343 3.7E-151 T 23-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 VV93_RS14235 e1d35e5be6a668ea21a6f3439d7afc68 373 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 3.7E-25 T 23-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 VV93_RS14235 e1d35e5be6a668ea21a6f3439d7afc68 373 SUPERFAMILY SSF54862 165 316 9.63E-19 T 23-04-2016 VV93_RS14235 e1d35e5be6a668ea21a6f3439d7afc68 373 Gene3D G3DSA:3.30.70.20 184 259 1.1E-7 T 23-04-2016 VV93_RS14235 e1d35e5be6a668ea21a6f3439d7afc68 373 PANTHER PTHR30002 1 364 3.1E-189 T 23-04-2016 VV93_RS14235 e1d35e5be6a668ea21a6f3439d7afc68 373 PANTHER PTHR30002:SF4 1 364 3.1E-189 T 23-04-2016 VV93_RS14235 e1d35e5be6a668ea21a6f3439d7afc68 373 Pfam PF13484 4Fe-4S double cluster binding domain 189 252 1.9E-19 T 23-04-2016 VV93_RS14235 e1d35e5be6a668ea21a6f3439d7afc68 373 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV93_RS14235 e1d35e5be6a668ea21a6f3439d7afc68 373 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 49.817 T 23-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PANTHER PTHR11405:SF5 1 1070 0.0 T 23-04-2016 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 4.3E-41 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.5E-72 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 1.1E-37 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.107 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:3.30.1490.20 141 199 2.5E-25 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SMART SM00851 955 1041 2.0E-25 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:3.30.1490.20 688 744 3.6E-26 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SUPERFAMILY SSF52335 936 1071 2.62E-34 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SUPERFAMILY SSF56059 128 401 2.12E-108 T 23-04-2016 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:3.40.50.20 3 108 1.5E-46 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SUPERFAMILY SSF56059 673 932 3.54E-104 T 23-04-2016 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SMART SM01096 424 547 5.8E-76 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.389 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PANTHER PTHR11405 1 1070 0.0 T 23-04-2016 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SUPERFAMILY SSF52440 556 675 3.02E-49 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SUPERFAMILY SSF52440 1 127 3.17E-50 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Pfam PF02142 MGS-like domain 956 1041 1.5E-15 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:3.30.470.20 200 399 1.5E-74 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:3.30.470.20 745 932 1.5E-81 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:1.10.1030.10 400 538 6.5E-53 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SUPERFAMILY SSF48108 397 554 3.01E-52 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.1E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.1E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.1E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.1E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 8.1E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 8.1E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.1E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:3.40.50.1380 939 1071 5.2E-38 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain VV93_RS02880 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:3.40.50.20 539 662 8.5E-61 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS00480 6e3f83e1724a6f733b943f6874ce8be8 276 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 242 4.8E-32 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 VV93_RS00480 6e3f83e1724a6f733b943f6874ce8be8 276 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 13 271 4.4E-60 T 23-04-2016 IPR000150 Cof protein GO:0016787 VV93_RS00480 6e3f83e1724a6f733b943f6874ce8be8 276 PANTHER PTHR10000:SF20 12 276 8.5E-126 T 23-04-2016 VV93_RS00480 6e3f83e1724a6f733b943f6874ce8be8 276 PANTHER PTHR10000 12 276 8.5E-126 T 23-04-2016 VV93_RS00480 6e3f83e1724a6f733b943f6874ce8be8 276 Gene3D G3DSA:3.30.1240.10 92 187 1.1E-23 T 23-04-2016 VV93_RS00480 6e3f83e1724a6f733b943f6874ce8be8 276 SUPERFAMILY SSF56784 12 275 4.27E-69 T 23-04-2016 IPR023214 HAD-like domain VV93_RS00480 6e3f83e1724a6f733b943f6874ce8be8 276 ProSitePatterns PS01228 Hypothetical cof family signature 1. 13 24 - T 23-04-2016 IPR000150 Cof protein GO:0016787 VV93_RS00480 6e3f83e1724a6f733b943f6874ce8be8 276 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 271 7.6E-66 T 23-04-2016 IPR023214 HAD-like domain VV93_RS00480 6e3f83e1724a6f733b943f6874ce8be8 276 Gene3D G3DSA:3.40.50.1000 188 276 1.1E-56 T 23-04-2016 IPR023214 HAD-like domain VV93_RS00480 6e3f83e1724a6f733b943f6874ce8be8 276 Gene3D G3DSA:3.40.50.1000 9 81 1.1E-56 T 23-04-2016 IPR023214 HAD-like domain VV93_RS00480 6e3f83e1724a6f733b943f6874ce8be8 276 ProSitePatterns PS01229 Hypothetical cof family signature 2. 223 245 - T 23-04-2016 VV93_RS14800 c2823c8675bd9d2a4d14db9ea4da39b3 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 214 2.0E-20 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VV93_RS14800 c2823c8675bd9d2a4d14db9ea4da39b3 237 SUPERFAMILY SSF63380 2 101 6.1E-18 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VV93_RS14800 c2823c8675bd9d2a4d14db9ea4da39b3 237 PANTHER PTHR19370 3 237 2.5E-117 T 23-04-2016 VV93_RS14800 c2823c8675bd9d2a4d14db9ea4da39b3 237 Gene3D G3DSA:3.40.50.80 104 235 1.7E-34 T 23-04-2016 VV93_RS14800 c2823c8675bd9d2a4d14db9ea4da39b3 237 Gene3D G3DSA:2.40.30.10 1 101 1.6E-25 T 23-04-2016 VV93_RS14800 c2823c8675bd9d2a4d14db9ea4da39b3 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 2.8E-14 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VV93_RS14800 c2823c8675bd9d2a4d14db9ea4da39b3 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 2.8E-14 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VV93_RS14800 c2823c8675bd9d2a4d14db9ea4da39b3 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 2.8E-14 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VV93_RS14800 c2823c8675bd9d2a4d14db9ea4da39b3 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 2.8E-14 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VV93_RS14800 c2823c8675bd9d2a4d14db9ea4da39b3 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 2.8E-14 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VV93_RS14800 c2823c8675bd9d2a4d14db9ea4da39b3 237 PANTHER PTHR19370:SF119 3 237 2.5E-117 T 23-04-2016 VV93_RS14800 c2823c8675bd9d2a4d14db9ea4da39b3 237 Pfam PF00970 Oxidoreductase FAD-binding domain 6 99 1.9E-4 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain VV93_RS14800 c2823c8675bd9d2a4d14db9ea4da39b3 237 SUPERFAMILY SSF52343 104 235 1.44E-33 T 23-04-2016 VV93_RS13360 21c2105d5bab47f4688b358489b63c5e 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 1.4E-119 T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VV93_RS13360 21c2105d5bab47f4688b358489b63c5e 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VV93_RS13360 21c2105d5bab47f4688b358489b63c5e 502 Gene3D G3DSA:3.40.630.10 171 499 4.1E-140 T 23-04-2016 VV93_RS13360 21c2105d5bab47f4688b358489b63c5e 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.835 T 23-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 VV93_RS13360 21c2105d5bab47f4688b358489b63c5e 502 PANTHER PTHR11963:SF13 7 502 1.2E-263 T 23-04-2016 VV93_RS13360 21c2105d5bab47f4688b358489b63c5e 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 5.7E-34 T 23-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VV93_RS13360 21c2105d5bab47f4688b358489b63c5e 502 SUPERFAMILY SSF52949 1 184 3.47E-52 T 23-04-2016 VV93_RS13360 21c2105d5bab47f4688b358489b63c5e 502 SUPERFAMILY SSF53187 179 496 8.48E-126 T 23-04-2016 VV93_RS13360 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 4.8E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV93_RS13360 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 4.8E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV93_RS13360 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.8E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV93_RS13360 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 4.8E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV93_RS13360 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 4.8E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV93_RS13360 21c2105d5bab47f4688b358489b63c5e 502 Gene3D G3DSA:3.40.220.10 1 161 9.2E-68 T 23-04-2016 VV93_RS13360 21c2105d5bab47f4688b358489b63c5e 502 PANTHER PTHR11963 7 502 1.2E-263 T 23-04-2016 VV93_RS02255 c5a516981688324e960ebf8e25793526 85 PANTHER PTHR15893 1 85 5.2E-53 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS02255 c5a516981688324e960ebf8e25793526 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.447 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS02255 c5a516981688324e960ebf8e25793526 85 SUPERFAMILY SSF110324 2 80 1.43E-34 T 23-04-2016 VV93_RS02255 c5a516981688324e960ebf8e25793526 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.8E-39 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS02255 c5a516981688324e960ebf8e25793526 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.8E-39 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS02255 c5a516981688324e960ebf8e25793526 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.8E-39 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS02255 c5a516981688324e960ebf8e25793526 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-18 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS02255 c5a516981688324e960ebf8e25793526 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.1E-39 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS02255 c5a516981688324e960ebf8e25793526 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 9.9E-44 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS02255 c5a516981688324e960ebf8e25793526 85 Gene3D G3DSA:2.40.50.100 20 82 2.1E-32 T 23-04-2016 VV93_RS02255 c5a516981688324e960ebf8e25793526 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 23-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS20335 250ae9e160e8ac5c21a3797670a1680c 387 PANTHER PTHR11390 1 387 1.3E-116 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS20335 250ae9e160e8ac5c21a3797670a1680c 387 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 263 278 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VV93_RS20335 250ae9e160e8ac5c21a3797670a1680c 387 SMART SM00436 71 166 5.8E-32 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VV93_RS20335 250ae9e160e8ac5c21a3797670a1680c 387 Gene3D G3DSA:1.10.290.10 240 364 1.6E-35 T 23-04-2016 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VV93_RS20335 250ae9e160e8ac5c21a3797670a1680c 387 SUPERFAMILY SSF56712 1 387 2.62E-115 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain VV93_RS20335 250ae9e160e8ac5c21a3797670a1680c 387 Gene3D G3DSA:1.10.460.10 104 160 1.5E-23 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VV93_RS20335 250ae9e160e8ac5c21a3797670a1680c 387 Gene3D G3DSA:1.10.460.10 221 239 1.5E-23 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VV93_RS20335 250ae9e160e8ac5c21a3797670a1680c 387 SMART SM00437 226 387 1.2E-8 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VV93_RS20335 250ae9e160e8ac5c21a3797670a1680c 387 Pfam PF01751 Toprim domain 12 76 1.4E-8 T 23-04-2016 IPR006171 Toprim domain VV93_RS20335 250ae9e160e8ac5c21a3797670a1680c 387 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 350 366 9.0E-20 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS20335 250ae9e160e8ac5c21a3797670a1680c 387 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 136 154 9.0E-20 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS20335 250ae9e160e8ac5c21a3797670a1680c 387 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 269 278 9.0E-20 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS20335 250ae9e160e8ac5c21a3797670a1680c 387 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 41 54 9.0E-20 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VV93_RS20335 250ae9e160e8ac5c21a3797670a1680c 387 Pfam PF01131 DNA topoisomerase 103 386 1.8E-79 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VV93_RS20335 250ae9e160e8ac5c21a3797670a1680c 387 Gene3D G3DSA:3.40.50.140 1 96 5.7E-26 T 23-04-2016 IPR006171 Toprim domain VV93_RS04740 f22954977851232d637ea7071cb24bcd 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 249 9.1E-40 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VV93_RS04740 f22954977851232d637ea7071cb24bcd 251 PANTHER PTHR30269 1 251 4.3E-32 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 ProSitePatterns PS01047 Heavy-metal-associated domain. 76 105 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 315 329 9.7E-28 T 23-04-2016 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 683 695 9.7E-28 T 23-04-2016 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 660 679 9.7E-28 T 23-04-2016 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 466 480 9.7E-28 T 23-04-2016 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 609 619 9.7E-28 T 23-04-2016 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 587 598 9.7E-28 T 23-04-2016 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 Gene3D G3DSA:2.70.150.10 218 366 2.1E-25 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 PRINTS PR00941 Cadmium-transporting ATPase signature 85 106 3.5E-6 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 PRINTS PR00941 Cadmium-transporting ATPase signature 350 364 3.5E-6 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 PRINTS PR00941 Cadmium-transporting ATPase signature 250 270 3.5E-6 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 Pfam PF00122 E1-E2 ATPase 236 457 4.8E-60 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 Gene3D G3DSA:3.30.70.100 72 138 1.8E-15 T 23-04-2016 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 238 739 7.1E-82 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 SUPERFAMILY SSF55008 73 138 2.88E-13 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 Gene3D G3DSA:3.40.1110.10 480 589 1.7E-11 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 Pfam PF00403 Heavy-metal-associated domain 76 128 1.1E-9 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 SUPERFAMILY SSF81665 709 748 9.68E-19 T 23-04-2016 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 SUPERFAMILY SSF81665 366 460 9.68E-19 T 23-04-2016 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 SUPERFAMILY SSF81665 218 269 9.68E-19 T 23-04-2016 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 SUPERFAMILY SSF81653 271 365 1.57E-20 T 23-04-2016 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 PANTHER PTHR24093 55 763 3.6E-205 T 23-04-2016 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 Pfam PF00702 haloacid dehalogenase-like hydrolase 463 673 2.1E-38 T 23-04-2016 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 Gene3D G3DSA:3.40.50.1000 439 479 2.7E-44 T 23-04-2016 IPR023214 HAD-like domain VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 Gene3D G3DSA:3.40.50.1000 590 725 2.7E-44 T 23-04-2016 IPR023214 HAD-like domain VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 468 474 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 SUPERFAMILY SSF56784 559 760 1.13E-50 T 23-04-2016 IPR023214 HAD-like domain VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 SUPERFAMILY SSF56784 465 484 1.13E-50 T 23-04-2016 IPR023214 HAD-like domain VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 215 762 4.3E-170 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 PANTHER PTHR24093:SF126 55 763 3.6E-205 T 23-04-2016 VV93_RS10550 5d7f656b942c45f31aee99db34b09a5c 770 ProSitePatterns PS01229 Hypothetical cof family signature 2. 660 682 - T 23-04-2016 VV93_RS22815 85c11c57946583b11cc26a6ed6bae0c7 211 Pfam PF12838 4Fe-4S dicluster domain 165 211 2.5E-9 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV93_RS22815 85c11c57946583b11cc26a6ed6bae0c7 211 SUPERFAMILY SSF54862 126 211 3.48E-14 T 23-04-2016 VV93_RS22815 85c11c57946583b11cc26a6ed6bae0c7 211 PANTHER PTHR24960:SF43 70 211 6.3E-21 T 23-04-2016 VV93_RS22815 85c11c57946583b11cc26a6ed6bae0c7 211 Gene3D G3DSA:3.30.70.20 143 211 1.5E-11 T 23-04-2016 VV93_RS22815 85c11c57946583b11cc26a6ed6bae0c7 211 PANTHER PTHR24960 70 211 6.3E-21 T 23-04-2016 VV93_RS10675 518860a694969547e8f14384a7a988c0 333 Gene3D G3DSA:2.40.160.40 69 237 4.4E-4 T 23-04-2016 VV93_RS10675 518860a694969547e8f14384a7a988c0 333 Pfam PF11059 Protein of unknown function (DUF2860) 33 332 1.7E-106 T 23-04-2016 IPR016896 Protein of unknown function DUF2860 VV93_RS10675 518860a694969547e8f14384a7a988c0 333 PIRSF PIRSF028696 1 333 8.1E-139 T 23-04-2016 IPR016896 Protein of unknown function DUF2860 VV93_RS12145 a761e31e221263306b0aeb7422cbb641 175 SUPERFAMILY SSF55718 44 139 8.24E-21 T 23-04-2016 IPR003033 SCP2 sterol-binding domain VV93_RS12145 a761e31e221263306b0aeb7422cbb641 175 Pfam PF02036 SCP-2 sterol transfer family 42 134 3.4E-19 T 23-04-2016 IPR003033 SCP2 sterol-binding domain VV93_RS12145 a761e31e221263306b0aeb7422cbb641 175 Gene3D G3DSA:3.30.1050.10 59 136 2.4E-11 T 23-04-2016 IPR003033 SCP2 sterol-binding domain VV93_RS12145 a761e31e221263306b0aeb7422cbb641 175 PIRSF PIRSF025550 1 174 7.0E-84 T 23-04-2016 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT VV93_RS12145 a761e31e221263306b0aeb7422cbb641 175 PANTHER PTHR10094:SF16 1 145 2.3E-67 T 23-04-2016 VV93_RS12145 a761e31e221263306b0aeb7422cbb641 175 PANTHER PTHR10094 1 145 2.3E-67 T 23-04-2016 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 437 565 7.9E-5 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 337 1.2E-45 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 SUPERFAMILY SSF55124 352 428 1.8E-21 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 578 58.664 T 23-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 PANTHER PTHR11493:SF47 18 567 1.7E-271 T 23-04-2016 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 PRINTS PR00397 Sirohaem Fe-binding site signature 485 503 4.7E-9 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 4.7E-9 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 566 9.7E-287 T 23-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 SUPERFAMILY SSF56014 154 350 1.83E-57 T 23-04-2016 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 Gene3D G3DSA:3.30.413.10 436 565 2.5E-34 T 23-04-2016 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 Gene3D G3DSA:3.30.413.10 154 346 1.5E-70 T 23-04-2016 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 SUPERFAMILY SSF56014 435 567 2.62E-33 T 23-04-2016 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 Gene3D G3DSA:3.90.480.10 348 428 3.8E-62 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 Gene3D G3DSA:3.90.480.10 79 151 3.8E-62 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 485 501 - T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 PANTHER PTHR11493 18 567 1.7E-271 T 23-04-2016 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 SUPERFAMILY SSF55124 17 150 1.08E-27 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 359 423 2.5E-14 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VV93_RS13695 dc2302e07ceaba089133ad188be7fe65 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 6.5E-14 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VV93_RS06730 5d44c2505ed73b3fb85e561d4c7ecba3 231 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS06730 5d44c2505ed73b3fb85e561d4c7ecba3 231 PANTHER PTHR11079:SF62 3 218 9.3E-107 T 23-04-2016 VV93_RS06730 5d44c2505ed73b3fb85e561d4c7ecba3 231 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 5.6E-104 T 23-04-2016 IPR006508 Pseudouridine synthase, RluA-like KEGG: 00627+5.4.99.- VV93_RS06730 5d44c2505ed73b3fb85e561d4c7ecba3 231 Pfam PF00849 RNA pseudouridylate synthase 10 153 3.3E-24 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS06730 5d44c2505ed73b3fb85e561d4c7ecba3 231 SUPERFAMILY SSF55120 2 197 1.92E-44 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS06730 5d44c2505ed73b3fb85e561d4c7ecba3 231 PANTHER PTHR11079 3 218 9.3E-107 T 23-04-2016 VV93_RS00515 4a9da6f432eb46f6afeeb9fb2ea223b1 405 PANTHER PTHR23547 1 401 7.7E-182 T 23-04-2016 VV93_RS00515 4a9da6f432eb46f6afeeb9fb2ea223b1 405 SUPERFAMILY SSF103473 9 399 8.76E-34 T 23-04-2016 IPR020846 Major facilitator superfamily domain VV93_RS00515 4a9da6f432eb46f6afeeb9fb2ea223b1 405 Gene3D G3DSA:1.20.1250.20 217 399 1.8E-9 T 23-04-2016 VV93_RS00515 4a9da6f432eb46f6afeeb9fb2ea223b1 405 PANTHER PTHR23547:SF1 1 401 7.7E-182 T 23-04-2016 VV93_RS00515 4a9da6f432eb46f6afeeb9fb2ea223b1 405 Gene3D G3DSA:1.20.1250.20 11 201 2.3E-15 T 23-04-2016 VV93_RS00515 4a9da6f432eb46f6afeeb9fb2ea223b1 405 Pfam PF07690 Major Facilitator Superfamily 19 276 3.8E-17 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV93_RS04890 4e40f88986ebad73401cd567c031c963 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 7.1E-34 T 23-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 VV93_RS04890 4e40f88986ebad73401cd567c031c963 114 PANTHER PTHR38689 2 114 1.2E-54 T 23-04-2016 VV93_RS04890 4e40f88986ebad73401cd567c031c963 114 SUPERFAMILY SSF81343 4 113 9.65E-25 T 23-04-2016 VV93_RS04890 4e40f88986ebad73401cd567c031c963 114 PANTHER PTHR38689:SF1 2 114 1.2E-54 T 23-04-2016 VV93_RS04890 4e40f88986ebad73401cd567c031c963 114 Gene3D G3DSA:1.20.1300.10 1 113 1.4E-34 T 23-04-2016 VV93_RS04890 4e40f88986ebad73401cd567c031c963 114 PIRSF PIRSF000169 1 114 6.3E-37 T 23-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 VV93_RS05995 a46414d25147aa12f8a339b4b2a51482 235 SUPERFAMILY SSF53335 15 233 7.45E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS05995 a46414d25147aa12f8a339b4b2a51482 235 PANTHER PTHR10108 5 233 7.1E-152 T 23-04-2016 VV93_RS05995 a46414d25147aa12f8a339b4b2a51482 235 Gene3D G3DSA:3.40.50.150 23 220 1.3E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS05995 a46414d25147aa12f8a339b4b2a51482 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 3.9E-87 T 23-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 VV93_RS05995 a46414d25147aa12f8a339b4b2a51482 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 9 235 38.462 T 23-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 VV93_RS05995 a46414d25147aa12f8a339b4b2a51482 235 PANTHER PTHR10108:SF910 5 233 7.1E-152 T 23-04-2016 VV93_RS05995 a46414d25147aa12f8a339b4b2a51482 235 Pfam PF13489 Methyltransferase domain 52 200 6.0E-25 T 23-04-2016 VV93_RS03655 28cecf7c5624474eb3ba91cc7883c5ba 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.0E-196 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VV93_RS03655 28cecf7c5624474eb3ba91cc7883c5ba 487 PIRSF PIRSF000130 1 487 2.7E-202 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VV93_RS03655 28cecf7c5624474eb3ba91cc7883c5ba 487 SMART SM00116 158 206 2.3E-5 T 23-04-2016 IPR000644 CBS domain VV93_RS03655 28cecf7c5624474eb3ba91cc7883c5ba 487 SMART SM00116 96 144 1.0E-12 T 23-04-2016 IPR000644 CBS domain VV93_RS03655 28cecf7c5624474eb3ba91cc7883c5ba 487 Pfam PF00571 CBS domain 149 201 5.6E-4 T 23-04-2016 IPR000644 CBS domain VV93_RS03655 28cecf7c5624474eb3ba91cc7883c5ba 487 Pfam PF00571 CBS domain 95 140 7.1E-10 T 23-04-2016 IPR000644 CBS domain VV93_RS03655 28cecf7c5624474eb3ba91cc7883c5ba 487 SUPERFAMILY SSF51412 217 477 8.37E-126 T 23-04-2016 VV93_RS03655 28cecf7c5624474eb3ba91cc7883c5ba 487 SUPERFAMILY SSF51412 1 90 8.37E-126 T 23-04-2016 VV93_RS03655 28cecf7c5624474eb3ba91cc7883c5ba 487 SUPERFAMILY SSF54631 94 203 1.89E-26 T 23-04-2016 VV93_RS03655 28cecf7c5624474eb3ba91cc7883c5ba 487 PANTHER PTHR11911:SF6 1 281 2.8E-253 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VV93_RS03655 28cecf7c5624474eb3ba91cc7883c5ba 487 PANTHER PTHR11911:SF6 299 485 2.8E-253 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VV93_RS03655 28cecf7c5624474eb3ba91cc7883c5ba 487 Gene3D G3DSA:3.20.20.70 2 485 2.6E-200 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS03655 28cecf7c5624474eb3ba91cc7883c5ba 487 SMART SM01240 7 473 0.0 T 23-04-2016 VV93_RS03655 28cecf7c5624474eb3ba91cc7883c5ba 487 PANTHER PTHR11911 1 281 2.8E-253 T 23-04-2016 VV93_RS03655 28cecf7c5624474eb3ba91cc7883c5ba 487 PANTHER PTHR11911 299 485 2.8E-253 T 23-04-2016 VV93_RS03655 28cecf7c5624474eb3ba91cc7883c5ba 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 23-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 VV93_RS03655 28cecf7c5624474eb3ba91cc7883c5ba 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 85.456 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VV93_RS03655 28cecf7c5624474eb3ba91cc7883c5ba 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 1.8E-163 T 23-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 VV93_RS12600 e23213c8376ccfe89cfe50847ee9841d 182 Pfam PF05239 PRC-barrel domain 103 168 5.7E-12 T 23-04-2016 IPR027275 PRC-barrel domain VV93_RS12600 e23213c8376ccfe89cfe50847ee9841d 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 1.1E-55 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VV93_RS12600 e23213c8376ccfe89cfe50847ee9841d 182 SUPERFAMILY SSF50346 106 182 2.16E-20 T 23-04-2016 IPR011033 PRC-barrel-like VV93_RS12600 e23213c8376ccfe89cfe50847ee9841d 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.06 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VV93_RS12600 e23213c8376ccfe89cfe50847ee9841d 182 Pfam PF01782 RimM N-terminal domain 15 95 3.2E-24 T 23-04-2016 IPR002676 RimM protein GO:0006364 VV93_RS12600 e23213c8376ccfe89cfe50847ee9841d 182 Gene3D G3DSA:2.40.30.60 7 100 2.1E-32 T 23-04-2016 IPR002676 RimM protein GO:0006364 VV93_RS12600 e23213c8376ccfe89cfe50847ee9841d 182 Gene3D G3DSA:2.30.30.240 106 182 7.7E-30 T 23-04-2016 VV93_RS12600 e23213c8376ccfe89cfe50847ee9841d 182 PANTHER PTHR33692 9 180 1.6E-61 T 23-04-2016 VV93_RS12600 e23213c8376ccfe89cfe50847ee9841d 182 PANTHER PTHR33692:SF1 9 180 1.6E-61 T 23-04-2016 VV93_RS12600 e23213c8376ccfe89cfe50847ee9841d 182 SUPERFAMILY SSF50447 12 100 1.59E-23 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain VV93_RS16365 a85786ee2597b4c29c05559061e799f6 366 Pfam PF04607 Region found in RelA / SpoT proteins 185 295 3.4E-35 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 VV93_RS16365 a85786ee2597b4c29c05559061e799f6 366 Gene3D G3DSA:3.10.20.30 338 366 8.4E-7 T 23-04-2016 IPR012675 Beta-grasp domain VV93_RS16365 a85786ee2597b4c29c05559061e799f6 366 Gene3D G3DSA:3.30.460.10 128 274 6.4E-47 T 23-04-2016 VV93_RS16365 a85786ee2597b4c29c05559061e799f6 366 SUPERFAMILY SSF81301 130 343 2.78E-60 T 23-04-2016 VV93_RS16365 a85786ee2597b4c29c05559061e799f6 366 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 1 366 7.6E-179 T 23-04-2016 IPR004811 RelA/SpoT family GO:0015969 VV93_RS16365 a85786ee2597b4c29c05559061e799f6 366 Pfam PF13328 HD domain 1 125 1.2E-45 T 23-04-2016 IPR003607 HD/PDEase domain VV93_RS16365 a85786ee2597b4c29c05559061e799f6 366 SUPERFAMILY SSF81271 339 366 2.29E-5 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VV93_RS16365 a85786ee2597b4c29c05559061e799f6 366 PANTHER PTHR21262 1 366 1.1E-238 T 23-04-2016 VV93_RS16365 a85786ee2597b4c29c05559061e799f6 366 SMART SM00954 185 295 2.7E-59 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 VV93_RS16365 a85786ee2597b4c29c05559061e799f6 366 Pfam PF02824 TGS domain 339 366 1.1E-7 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 VV93_RS16365 a85786ee2597b4c29c05559061e799f6 366 PANTHER PTHR21262:SF0 1 366 1.1E-238 T 23-04-2016 VV93_RS16365 a85786ee2597b4c29c05559061e799f6 366 SUPERFAMILY SSF109604 1 140 1.0E-58 T 23-04-2016 VV93_RS06200 8f459fa201d66ddc8794beca45e8d583 392 Pfam PF01734 Patatin-like phospholipase 30 197 9.6E-21 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 VV93_RS06200 8f459fa201d66ddc8794beca45e8d583 392 PANTHER PTHR14226:SF25 13 221 5.8E-61 T 23-04-2016 VV93_RS06200 8f459fa201d66ddc8794beca45e8d583 392 PANTHER PTHR14226:SF25 271 372 5.8E-61 T 23-04-2016 VV93_RS06200 8f459fa201d66ddc8794beca45e8d583 392 PANTHER PTHR14226 13 221 5.8E-61 T 23-04-2016 VV93_RS06200 8f459fa201d66ddc8794beca45e8d583 392 PANTHER PTHR14226 271 372 5.8E-61 T 23-04-2016 VV93_RS06200 8f459fa201d66ddc8794beca45e8d583 392 SUPERFAMILY SSF52151 25 278 7.06E-36 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VV93_RS14195 cc77328cc8dc9015a9d416c581a6e988 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 5.9E-136 T 23-04-2016 IPR010200 HflC GO:0016021|GO:0052547 VV93_RS14195 cc77328cc8dc9015a9d416c581a6e988 326 SMART SM00244 18 218 1.3E-45 T 23-04-2016 IPR001107 Band 7 domain VV93_RS14195 cc77328cc8dc9015a9d416c581a6e988 326 SUPERFAMILY SSF117892 56 142 1.57E-21 T 23-04-2016 IPR001107 Band 7 domain VV93_RS14195 cc77328cc8dc9015a9d416c581a6e988 326 SUPERFAMILY SSF117892 173 223 1.57E-21 T 23-04-2016 IPR001107 Band 7 domain VV93_RS14195 cc77328cc8dc9015a9d416c581a6e988 326 PANTHER PTHR10264:SF80 1 144 3.3E-104 T 23-04-2016 VV93_RS14195 cc77328cc8dc9015a9d416c581a6e988 326 PANTHER PTHR10264:SF80 174 322 3.3E-104 T 23-04-2016 VV93_RS14195 cc77328cc8dc9015a9d416c581a6e988 326 PIRSF PIRSF005651 1 326 3.7E-95 T 23-04-2016 IPR010200 HflC GO:0016021|GO:0052547 VV93_RS14195 cc77328cc8dc9015a9d416c581a6e988 326 PANTHER PTHR10264 1 144 3.3E-104 T 23-04-2016 IPR001972 Stomatin family GO:0016020 VV93_RS14195 cc77328cc8dc9015a9d416c581a6e988 326 PANTHER PTHR10264 174 322 3.3E-104 T 23-04-2016 IPR001972 Stomatin family GO:0016020 VV93_RS14195 cc77328cc8dc9015a9d416c581a6e988 326 Pfam PF01145 SPFH domain / Band 7 family 22 233 5.4E-29 T 23-04-2016 IPR001107 Band 7 domain VV93_RS14000 6491a1343856e55db46db705efaef596 394 SUPERFAMILY SSF50447 205 301 5.11E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain VV93_RS14000 6491a1343856e55db46db705efaef596 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.0E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS14000 6491a1343856e55db46db705efaef596 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.0E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS14000 6491a1343856e55db46db705efaef596 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.0E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS14000 6491a1343856e55db46db705efaef596 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.0E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS14000 6491a1343856e55db46db705efaef596 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.0E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS14000 6491a1343856e55db46db705efaef596 394 Gene3D G3DSA:3.40.50.300 4 211 5.3E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14000 6491a1343856e55db46db705efaef596 394 PANTHER PTHR23115:SF151 1 392 2.4E-286 T 23-04-2016 VV93_RS14000 6491a1343856e55db46db705efaef596 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 6.4E-14 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VV93_RS14000 6491a1343856e55db46db705efaef596 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 9.2E-17 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VV93_RS14000 6491a1343856e55db46db705efaef596 394 PANTHER PTHR23115 1 392 2.4E-286 T 23-04-2016 VV93_RS14000 6491a1343856e55db46db705efaef596 394 Gene3D G3DSA:2.40.30.10 300 392 7.7E-47 T 23-04-2016 VV93_RS14000 6491a1343856e55db46db705efaef596 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.0E-57 T 23-04-2016 VV93_RS14000 6491a1343856e55db46db705efaef596 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 4.4E-33 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VV93_RS14000 6491a1343856e55db46db705efaef596 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site VV93_RS14000 6491a1343856e55db46db705efaef596 394 SUPERFAMILY SSF52540 6 219 3.86E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14000 6491a1343856e55db46db705efaef596 394 Gene3D G3DSA:2.40.30.10 212 298 1.1E-35 T 23-04-2016 VV93_RS14000 6491a1343856e55db46db705efaef596 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.346 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 VV93_RS14000 6491a1343856e55db46db705efaef596 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.3E-230 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 VV93_RS14000 6491a1343856e55db46db705efaef596 394 SUPERFAMILY SSF50465 298 393 3.17E-35 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VV93_RS02925 29f958b110b1f926aaf61d81240cb8be 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 6.4E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS02925 29f958b110b1f926aaf61d81240cb8be 470 Gene3D G3DSA:1.10.1060.10 5 149 1.9E-47 T 23-04-2016 VV93_RS02925 29f958b110b1f926aaf61d81240cb8be 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 1.1E-36 T 23-04-2016 VV93_RS02925 29f958b110b1f926aaf61d81240cb8be 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.1E-36 T 23-04-2016 VV93_RS02925 29f958b110b1f926aaf61d81240cb8be 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 1.1E-36 T 23-04-2016 VV93_RS02925 29f958b110b1f926aaf61d81240cb8be 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.1E-36 T 23-04-2016 VV93_RS02925 29f958b110b1f926aaf61d81240cb8be 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 1.1E-36 T 23-04-2016 VV93_RS02925 29f958b110b1f926aaf61d81240cb8be 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 469 5.9E-253 T 23-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 VV93_RS02925 29f958b110b1f926aaf61d81240cb8be 470 Gene3D G3DSA:3.50.50.60 237 398 3.5E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS02925 29f958b110b1f926aaf61d81240cb8be 470 SUPERFAMILY SSF46548 6 157 1.46E-40 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VV93_RS02925 29f958b110b1f926aaf61d81240cb8be 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 6.9E-39 T 23-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II VV93_RS02925 29f958b110b1f926aaf61d81240cb8be 470 PANTHER PTHR11938 22 469 2.0E-297 T 23-04-2016 VV93_RS02925 29f958b110b1f926aaf61d81240cb8be 470 SUPERFAMILY SSF51971 145 399 8.83E-70 T 23-04-2016 VV93_RS02925 29f958b110b1f926aaf61d81240cb8be 470 Gene3D G3DSA:3.40.50.720 399 469 3.9E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS02925 29f958b110b1f926aaf61d81240cb8be 470 Gene3D G3DSA:3.40.50.720 150 236 3.9E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS02925 29f958b110b1f926aaf61d81240cb8be 470 PANTHER PTHR11938:SF93 22 469 2.0E-297 T 23-04-2016 VV93_RS14835 084de3d5b17779dcd4e7b808d88474d3 497 Pfam PF02541 Ppx/GppA phosphatase family 23 303 3.6E-88 T 23-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VV93_RS14835 084de3d5b17779dcd4e7b808d88474d3 497 SUPERFAMILY SSF53067 9 129 8.42E-37 T 23-04-2016 VV93_RS14835 084de3d5b17779dcd4e7b808d88474d3 497 SUPERFAMILY SSF109604 309 495 1.48E-41 T 23-04-2016 VV93_RS14835 084de3d5b17779dcd4e7b808d88474d3 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 495 59.054 T 23-04-2016 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VV93_RS14835 084de3d5b17779dcd4e7b808d88474d3 497 SUPERFAMILY SSF53067 134 305 9.99E-43 T 23-04-2016 VV93_RS14835 084de3d5b17779dcd4e7b808d88474d3 497 PIRSF PIRSF001267 1 497 3.9E-178 T 23-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VV93_RS14835 084de3d5b17779dcd4e7b808d88474d3 497 Gene3D G3DSA:3.30.420.40 5 129 7.4E-44 T 23-04-2016 VV93_RS14835 084de3d5b17779dcd4e7b808d88474d3 497 PANTHER PTHR30005:SF2 1 493 4.0E-279 T 23-04-2016 VV93_RS14835 084de3d5b17779dcd4e7b808d88474d3 497 Gene3D G3DSA:3.30.420.150 130 304 2.6E-50 T 23-04-2016 VV93_RS14835 084de3d5b17779dcd4e7b808d88474d3 497 PANTHER PTHR30005 1 493 4.0E-279 T 23-04-2016 VV93_RS03220 776b03429a73b73df7a1e4d12f008693 328 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 7 284 3.0E-81 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VV93_RS03220 776b03429a73b73df7a1e4d12f008693 328 PANTHER PTHR30480 4 287 3.2E-119 T 23-04-2016 VV93_RS03220 776b03429a73b73df7a1e4d12f008693 328 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 229 246 - T 23-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 VV93_RS03220 776b03429a73b73df7a1e4d12f008693 328 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 327 45.419 T 23-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 VV93_RS03220 776b03429a73b73df7a1e4d12f008693 328 Gene3D G3DSA:3.20.20.300 3 283 1.1E-89 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VV93_RS03220 776b03429a73b73df7a1e4d12f008693 328 SUPERFAMILY SSF51445 2 284 2.42E-84 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily VV93_RS03220 776b03429a73b73df7a1e4d12f008693 328 PANTHER PTHR30480:SF7 4 287 3.2E-119 T 23-04-2016 VV93_RS13460 0d787aca9d8459b475385d987f42b6d6 274 Pfam PF00795 Carbon-nitrogen hydrolase 3 255 8.7E-59 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VV93_RS13460 0d787aca9d8459b475385d987f42b6d6 274 PANTHER PTHR23088 3 266 8.2E-114 T 23-04-2016 VV93_RS13460 0d787aca9d8459b475385d987f42b6d6 274 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 23-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site VV93_RS13460 0d787aca9d8459b475385d987f42b6d6 274 Gene3D G3DSA:3.60.110.10 3 267 2.8E-87 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VV93_RS13460 0d787aca9d8459b475385d987f42b6d6 274 PANTHER PTHR23088:SF27 3 266 8.2E-114 T 23-04-2016 VV93_RS13460 0d787aca9d8459b475385d987f42b6d6 274 SUPERFAMILY SSF56317 3 263 1.96E-84 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VV93_RS04020 a426ca18bc1f05d02cf95307a385ce30 154 Pfam PF00156 Phosphoribosyl transferase domain 32 144 5.9E-13 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VV93_RS04020 a426ca18bc1f05d02cf95307a385ce30 154 Gene3D G3DSA:3.40.50.2020 1 147 6.6E-40 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like VV93_RS04020 a426ca18bc1f05d02cf95307a385ce30 154 SUPERFAMILY SSF53271 5 146 1.26E-27 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like VV93_RS04020 a426ca18bc1f05d02cf95307a385ce30 154 PANTHER PTHR39563 2 152 1.4E-100 T 23-04-2016 VV93_RS04020 a426ca18bc1f05d02cf95307a385ce30 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.625 T 23-04-2016 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 VV93_RS12335 c3a22af4a456608500c0076f3b19426d 340 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV93_RS12335 c3a22af4a456608500c0076f3b19426d 340 SUPERFAMILY SSF53335 157 323 4.48E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS12335 c3a22af4a456608500c0076f3b19426d 340 PANTHER PTHR18895:SF70 78 336 4.8E-112 T 23-04-2016 VV93_RS12335 c3a22af4a456608500c0076f3b19426d 340 PANTHER PTHR18895 78 336 4.8E-112 T 23-04-2016 VV93_RS12335 c3a22af4a456608500c0076f3b19426d 340 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 3.1E-58 T 23-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS12335 c3a22af4a456608500c0076f3b19426d 340 Gene3D G3DSA:3.40.50.150 165 337 5.1E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS12335 c3a22af4a456608500c0076f3b19426d 340 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.932 T 23-04-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS12335 c3a22af4a456608500c0076f3b19426d 340 Pfam PF05175 Methyltransferase small domain 172 336 3.5E-61 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VV93_RS01420 27fe97cfa6583f948daae4788429cf48 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 2.2E-34 T 23-04-2016 IPR013551 Domain of unknown function DUF1732 VV93_RS01420 27fe97cfa6583f948daae4788429cf48 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 4.7E-44 T 23-04-2016 IPR013527 YicC-like, N-terminal VV93_RS01420 27fe97cfa6583f948daae4788429cf48 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 3.8E-119 T 23-04-2016 IPR005229 Conserved hypothetical protein CHP00255 VV93_RS01420 27fe97cfa6583f948daae4788429cf48 288 PANTHER PTHR30636 1 288 1.3E-110 T 23-04-2016 VV93_RS01915 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 23-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01915 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 7 129 1.6E-53 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VV93_RS01915 a7cce014599a851da5a362b0f6ba5fe0 129 PANTHER PTHR11759 11 129 5.5E-71 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VV93_RS01915 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.753 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VV93_RS01915 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 23-04-2016 IPR018102 Ribosomal S11, conserved site VV93_RS01915 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 1.8E-52 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VV93_RS01915 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 23-04-2016 VV93_RS01915 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VV93_RS00785 f61204ffa3a8d9761b8176dabfcd4144 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 73 3.9E-15 T 23-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain VV93_RS00785 f61204ffa3a8d9761b8176dabfcd4144 94 SUPERFAMILY SSF54909 1 93 2.6E-27 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel VV93_RS00785 f61204ffa3a8d9761b8176dabfcd4144 94 Gene3D G3DSA:3.30.70.900 1 93 1.8E-30 T 23-04-2016 VV93_RS00785 f61204ffa3a8d9761b8176dabfcd4144 94 PANTHER PTHR33336 1 94 2.9E-24 T 23-04-2016 VV93_RS00785 f61204ffa3a8d9761b8176dabfcd4144 94 PANTHER PTHR33336:SF5 1 94 2.9E-24 T 23-04-2016 VV93_RS00295 a1b1386021d8d3c436578aa110bedcb2 298 Pfam PF00072 Response regulator receiver domain 3 115 1.1E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS00295 a1b1386021d8d3c436578aa110bedcb2 298 Gene3D G3DSA:3.40.50.2300 2 127 2.7E-30 T 23-04-2016 VV93_RS00295 a1b1386021d8d3c436578aa110bedcb2 298 SUPERFAMILY SSF52172 2 127 2.7E-30 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS00295 a1b1386021d8d3c436578aa110bedcb2 298 SMART SM00448 1 115 7.8E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS00295 a1b1386021d8d3c436578aa110bedcb2 298 PANTHER PTHR26402 1 115 1.8E-31 T 23-04-2016 VV93_RS01970 f80e07210bb9d09b808f0dab137fd596 291 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 39 249 3.7E-46 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VV93_RS01970 f80e07210bb9d09b808f0dab137fd596 291 Gene3D G3DSA:3.40.1010.10 36 152 1.7E-46 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 VV93_RS01970 f80e07210bb9d09b808f0dab137fd596 291 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 117 150 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VV93_RS01970 f80e07210bb9d09b808f0dab137fd596 291 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 37 270 4.3E-94 T 23-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VV93_RS01970 f80e07210bb9d09b808f0dab137fd596 291 PANTHER PTHR21091:SF16 37 273 6.4E-81 T 23-04-2016 VV93_RS01970 f80e07210bb9d09b808f0dab137fd596 291 PANTHER PTHR21091 37 273 6.4E-81 T 23-04-2016 VV93_RS01970 f80e07210bb9d09b808f0dab137fd596 291 SUPERFAMILY SSF53790 33 278 6.15E-79 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VV93_RS01970 f80e07210bb9d09b808f0dab137fd596 291 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 42 56 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VV93_RS01970 f80e07210bb9d09b808f0dab137fd596 291 Gene3D G3DSA:3.30.950.10 153 278 4.1E-47 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 VV93_RS06880 de0f095f71ce82d7d819afe2b6a1fe34 817 Pfam PF02687 FtsX-like permease family 692 809 3.4E-13 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VV93_RS06880 de0f095f71ce82d7d819afe2b6a1fe34 817 Pfam PF02687 FtsX-like permease family 244 368 1.8E-11 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VV93_RS06880 de0f095f71ce82d7d819afe2b6a1fe34 817 PANTHER PTHR30489:SF6 215 816 6.0E-284 T 23-04-2016 VV93_RS06880 de0f095f71ce82d7d819afe2b6a1fe34 817 PANTHER PTHR30489:SF6 1 186 6.0E-284 T 23-04-2016 VV93_RS06880 de0f095f71ce82d7d819afe2b6a1fe34 817 PANTHER PTHR30489 215 816 6.0E-284 T 23-04-2016 VV93_RS06880 de0f095f71ce82d7d819afe2b6a1fe34 817 PANTHER PTHR30489 1 186 6.0E-284 T 23-04-2016 VV93_RS12075 9056e191ec2fbb1b12047fe216776220 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 102 310 1.0E-82 T 23-04-2016 VV93_RS12075 9056e191ec2fbb1b12047fe216776220 326 PANTHER PTHR10000:SF7 60 316 8.3E-112 T 23-04-2016 VV93_RS12075 9056e191ec2fbb1b12047fe216776220 326 SUPERFAMILY SSF56784 104 311 1.76E-47 T 23-04-2016 IPR023214 HAD-like domain VV93_RS12075 9056e191ec2fbb1b12047fe216776220 326 Gene3D G3DSA:1.10.150.210 117 168 1.5E-28 T 23-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 VV93_RS12075 9056e191ec2fbb1b12047fe216776220 326 Gene3D G3DSA:3.40.50.1000 169 297 2.0E-35 T 23-04-2016 IPR023214 HAD-like domain VV93_RS12075 9056e191ec2fbb1b12047fe216776220 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 3.4E-24 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 VV93_RS12075 9056e191ec2fbb1b12047fe216776220 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 1.3E-11 T 23-04-2016 VV93_RS12075 9056e191ec2fbb1b12047fe216776220 326 PANTHER PTHR10000 60 316 8.3E-112 T 23-04-2016 VV93_RS12395 c3b40247a30c6fb04001ba8ed2407831 342 SMART SM00382 29 214 3.2E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS12395 c3b40247a30c6fb04001ba8ed2407831 342 Gene3D G3DSA:3.40.50.300 4 236 2.6E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12395 c3b40247a30c6fb04001ba8ed2407831 342 PANTHER PTHR24220:SF282 6 301 2.8E-130 T 23-04-2016 VV93_RS12395 c3b40247a30c6fb04001ba8ed2407831 342 SUPERFAMILY SSF52540 5 242 1.5E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12395 c3b40247a30c6fb04001ba8ed2407831 342 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS12395 c3b40247a30c6fb04001ba8ed2407831 342 SUPERFAMILY SSF50331 263 342 3.53E-8 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal VV93_RS12395 c3b40247a30c6fb04001ba8ed2407831 342 Pfam PF08402 TOBE domain 276 342 2.0E-7 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 VV93_RS12395 c3b40247a30c6fb04001ba8ed2407831 342 PANTHER PTHR24220 6 301 2.8E-130 T 23-04-2016 VV93_RS12395 c3b40247a30c6fb04001ba8ed2407831 342 Pfam PF00005 ABC transporter 20 164 7.9E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 PANTHER PTHR23083 94 360 2.9E-17 T 23-04-2016 VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 PANTHER PTHR23083 387 400 2.9E-17 T 23-04-2016 VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 PANTHER PTHR23083 626 631 2.9E-17 T 23-04-2016 VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 SUPERFAMILY SSF55073 483 636 4.63E-33 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 211 244 55.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 133 166 180.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 251 284 0.0023 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 331 364 180.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 291 324 49.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 93 126 61.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 174 207 130.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 Pfam PF13424 Tetratricopeptide repeat 213 283 3.5E-10 T 23-04-2016 VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 Gene3D G3DSA:3.30.70.270 480 636 5.3E-35 T 23-04-2016 VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 Gene3D G3DSA:1.25.40.10 178 418 1.1E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 SUPERFAMILY SSF48452 93 209 1.97E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 Gene3D G3DSA:1.25.40.10 84 169 1.4E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 476 636 1.0E-32 T 23-04-2016 IPR000160 GGDEF domain VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00267 466 639 4.3E-35 T 23-04-2016 IPR000160 GGDEF domain VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 SUPERFAMILY SSF48452 176 321 5.31E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 SUPERFAMILY SSF48452 290 425 9.1E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS07415 d98c11bd6d4558a993c2f495163f0376 644 Pfam PF00990 Diguanylate cyclase, GGDEF domain 479 635 3.4E-31 T 23-04-2016 IPR000160 GGDEF domain VV93_RS17905 715bcdfd26643da58bb79c8cde94bd63 198 SMART SM00958 1 61 2.7E-19 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VV93_RS17905 715bcdfd26643da58bb79c8cde94bd63 198 Gene3D G3DSA:3.40.50.300 120 198 6.7E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS17905 715bcdfd26643da58bb79c8cde94bd63 198 PRINTS PR00906 SecA protein signature 116 129 1.4E-29 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV93_RS17905 715bcdfd26643da58bb79c8cde94bd63 198 PRINTS PR00906 SecA protein signature 42 64 1.4E-29 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV93_RS17905 715bcdfd26643da58bb79c8cde94bd63 198 PRINTS PR00906 SecA protein signature 79 96 1.4E-29 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV93_RS17905 715bcdfd26643da58bb79c8cde94bd63 198 Pfam PF01043 SecA preprotein cross-linking domain 1 61 1.4E-26 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VV93_RS17905 715bcdfd26643da58bb79c8cde94bd63 198 PANTHER PTHR30612 1 198 2.1E-110 T 23-04-2016 VV93_RS17905 715bcdfd26643da58bb79c8cde94bd63 198 Gene3D G3DSA:3.90.1440.10 1 69 1.2E-33 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VV93_RS17905 715bcdfd26643da58bb79c8cde94bd63 198 SMART SM00957 1 105 2.3E-13 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VV93_RS17905 715bcdfd26643da58bb79c8cde94bd63 198 SUPERFAMILY SSF81767 1 71 3.79E-31 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VV93_RS17905 715bcdfd26643da58bb79c8cde94bd63 198 SUPERFAMILY SSF52540 34 118 2.31E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS17905 715bcdfd26643da58bb79c8cde94bd63 198 Gene3D G3DSA:3.40.50.300 70 119 3.6E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS17905 715bcdfd26643da58bb79c8cde94bd63 198 SUPERFAMILY SSF52540 119 197 2.05E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS17905 715bcdfd26643da58bb79c8cde94bd63 198 Pfam PF07517 SecA DEAD-like domain 51 105 5.4E-20 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VV93_RS21040 1ff3bb2711467fd4bdab6e23958d6df0 152 SUPERFAMILY SSF52096 2 69 2.93E-23 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS21040 1ff3bb2711467fd4bdab6e23958d6df0 152 SUPERFAMILY SSF52096 100 152 2.93E-23 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS21040 1ff3bb2711467fd4bdab6e23958d6df0 152 Pfam PF01343 Peptidase family S49 22 152 6.2E-44 T 23-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VV93_RS21040 1ff3bb2711467fd4bdab6e23958d6df0 152 PANTHER PTHR33209 1 152 3.0E-118 T 23-04-2016 VV93_RS21040 1ff3bb2711467fd4bdab6e23958d6df0 152 PANTHER PTHR33209:SF2 1 152 3.0E-118 T 23-04-2016 VV93_RS21040 1ff3bb2711467fd4bdab6e23958d6df0 152 Gene3D G3DSA:3.90.226.10 2 65 3.8E-25 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS21040 1ff3bb2711467fd4bdab6e23958d6df0 152 Gene3D G3DSA:3.90.226.10 131 152 3.8E-25 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS06665 602e4074347795b4c3e6939ad5b25f99 538 PANTHER PTHR30290:SF28 23 536 1.6E-238 T 23-04-2016 VV93_RS06665 602e4074347795b4c3e6939ad5b25f99 538 Gene3D G3DSA:3.40.190.10 175 306 8.4E-32 T 23-04-2016 VV93_RS06665 602e4074347795b4c3e6939ad5b25f99 538 Gene3D G3DSA:3.90.76.10 65 174 3.9E-20 T 23-04-2016 VV93_RS06665 602e4074347795b4c3e6939ad5b25f99 538 PIRSF PIRSF002741 1 537 2.7E-87 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VV93_RS06665 602e4074347795b4c3e6939ad5b25f99 538 Gene3D G3DSA:3.10.105.10 307 507 6.0E-56 T 23-04-2016 VV93_RS06665 602e4074347795b4c3e6939ad5b25f99 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 454 7.3E-81 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain VV93_RS06665 602e4074347795b4c3e6939ad5b25f99 538 PANTHER PTHR30290 23 536 1.6E-238 T 23-04-2016 VV93_RS06665 602e4074347795b4c3e6939ad5b25f99 538 SUPERFAMILY SSF53850 35 534 5.79E-128 T 23-04-2016 VV93_RS01690 8a91445cc6e68ea01e6da266bed5a3d7 426 PANTHER PTHR11374:SF25 7 422 5.4E-263 T 23-04-2016 VV93_RS01690 8a91445cc6e68ea01e6da266bed5a3d7 426 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 319 419 3.0E-23 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 VV93_RS01690 8a91445cc6e68ea01e6da266bed5a3d7 426 PANTHER PTHR11374 7 422 5.4E-263 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 VV93_RS01690 8a91445cc6e68ea01e6da266bed5a3d7 426 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 9 412 4.0E-117 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 VV93_RS01690 8a91445cc6e68ea01e6da266bed5a3d7 426 SUPERFAMILY SSF48179 203 293 4.42E-25 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VV93_RS01690 8a91445cc6e68ea01e6da266bed5a3d7 426 PIRSF PIRSF500136 2 426 3.1E-150 T 23-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 VV93_RS01690 8a91445cc6e68ea01e6da266bed5a3d7 426 SMART SM00984 319 419 9.1E-36 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 VV93_RS01690 8a91445cc6e68ea01e6da266bed5a3d7 426 SUPERFAMILY SSF51735 9 192 3.21E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01690 8a91445cc6e68ea01e6da266bed5a3d7 426 PIRSF PIRSF000124 8 425 2.7E-49 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 VV93_RS01690 8a91445cc6e68ea01e6da266bed5a3d7 426 Gene3D G3DSA:3.40.50.720 6 224 5.9E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01690 8a91445cc6e68ea01e6da266bed5a3d7 426 Gene3D G3DSA:3.40.50.720 234 422 2.1E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01690 8a91445cc6e68ea01e6da266bed5a3d7 426 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 292 1.9E-23 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 VV93_RS01690 8a91445cc6e68ea01e6da266bed5a3d7 426 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 9 182 3.2E-31 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 VV93_RS01690 8a91445cc6e68ea01e6da266bed5a3d7 426 SUPERFAMILY SSF52413 304 421 5.49E-29 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 VV93_RS05680 c5c7060fd952e6670fdbf53e7e947f4d 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 38.495 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 VV93_RS05680 c5c7060fd952e6670fdbf53e7e947f4d 213 Gene3D G3DSA:1.10.340.30 23 122 1.0E-33 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VV93_RS05680 c5c7060fd952e6670fdbf53e7e947f4d 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 2.6E-90 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 VV93_RS05680 c5c7060fd952e6670fdbf53e7e947f4d 213 Gene3D G3DSA:1.10.1670.10 123 208 9.5E-36 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VV93_RS05680 c5c7060fd952e6670fdbf53e7e947f4d 213 PIRSF PIRSF001435 1 211 1.2E-51 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 VV93_RS05680 c5c7060fd952e6670fdbf53e7e947f4d 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 23-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site VV93_RS05680 c5c7060fd952e6670fdbf53e7e947f4d 213 SMART SM00478 38 185 1.0E-57 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VV93_RS05680 c5c7060fd952e6670fdbf53e7e947f4d 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.4E-19 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VV93_RS05680 c5c7060fd952e6670fdbf53e7e947f4d 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 VV93_RS05680 c5c7060fd952e6670fdbf53e7e947f4d 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 6.0E-8 T 23-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 VV93_RS05680 c5c7060fd952e6670fdbf53e7e947f4d 213 PANTHER PTHR10359 1 212 2.4E-93 T 23-04-2016 VV93_RS05680 c5c7060fd952e6670fdbf53e7e947f4d 213 SMART SM00525 186 206 4.4E-5 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 VV93_RS05680 c5c7060fd952e6670fdbf53e7e947f4d 213 PANTHER PTHR10359:SF18 1 212 2.4E-93 T 23-04-2016 VV93_RS05680 c5c7060fd952e6670fdbf53e7e947f4d 213 SUPERFAMILY SSF48150 2 207 1.88E-72 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VV93_RS05680 c5c7060fd952e6670fdbf53e7e947f4d 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 23-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 VV93_RS14330 fae50dde27a7f49638530a49baf377a4 144 Gene3D G3DSA:3.40.250.10 22 142 2.1E-29 T 23-04-2016 IPR001763 Rhodanese-like domain VV93_RS14330 fae50dde27a7f49638530a49baf377a4 144 Pfam PF00581 Rhodanese-like domain 42 135 1.1E-18 T 23-04-2016 IPR001763 Rhodanese-like domain VV93_RS14330 fae50dde27a7f49638530a49baf377a4 144 PANTHER PTHR12231 1 144 3.1E-41 T 23-04-2016 VV93_RS14330 fae50dde27a7f49638530a49baf377a4 144 SMART SM00450 40 138 1.1E-21 T 23-04-2016 IPR001763 Rhodanese-like domain VV93_RS14330 fae50dde27a7f49638530a49baf377a4 144 SUPERFAMILY SSF52821 16 141 6.55E-32 T 23-04-2016 IPR001763 Rhodanese-like domain VV93_RS14330 fae50dde27a7f49638530a49baf377a4 144 PANTHER PTHR12231:SF138 1 144 3.1E-41 T 23-04-2016 VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 10 166 5.8E-44 T 23-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 SUPERFAMILY SSF53218 363 508 1.06E-42 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 Pfam PF03453 MoeA N-terminal region (domain I and II) 194 353 1.7E-32 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 439 472 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 SUPERFAMILY SSF63882 191 362 8.9E-48 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 Pfam PF00994 Probable molybdopterin binding domain 366 502 7.4E-26 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 SUPERFAMILY SSF52540 8 169 2.25E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 Gene3D G3DSA:2.40.340.10 519 586 5.9E-29 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 PANTHER PTHR10192 193 588 2.9E-156 T 23-04-2016 VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 Pfam PF03454 MoeA C-terminal region (domain IV) 517 588 9.1E-21 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 10 142 3.2E-48 T 23-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 SMART SM00852 366 503 2.9E-39 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 Gene3D G3DSA:3.40.980.10 349 518 1.4E-63 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 Gene3D G3DSA:2.170.190.11 236 327 7.5E-26 T 23-04-2016 VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 362 499 1.0E-31 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 SUPERFAMILY SSF63867 512 590 1.44E-22 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 Gene3D G3DSA:3.40.50.300 6 170 3.8E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 PIRSF PIRSF036618 1 592 0.0 T 23-04-2016 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 Gene3D G3DSA:3.90.105.10 213 235 7.7E-19 T 23-04-2016 VV93_RS08195 76f6a3ec6eebe25a21785587dd816644 592 Gene3D G3DSA:3.90.105.10 328 348 7.7E-19 T 23-04-2016 VV93_RS04845 7ea3047ebc4907afec9329757d7212eb 549 PANTHER PTHR22573 18 544 3.8E-281 T 23-04-2016 VV93_RS04845 7ea3047ebc4907afec9329757d7212eb 549 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 23-04-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 VV93_RS04845 7ea3047ebc4907afec9329757d7212eb 549 PANTHER PTHR22573:SF52 18 544 3.8E-281 T 23-04-2016 VV93_RS04845 7ea3047ebc4907afec9329757d7212eb 549 SUPERFAMILY SSF55957 433 544 2.17E-19 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS04845 7ea3047ebc4907afec9329757d7212eb 549 Gene3D G3DSA:3.40.120.10 30 225 3.6E-60 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS04845 7ea3047ebc4907afec9329757d7212eb 549 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 178 2.5E-38 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS04845 7ea3047ebc4907afec9329757d7212eb 549 SUPERFAMILY SSF53738 209 315 5.41E-7 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS04845 7ea3047ebc4907afec9329757d7212eb 549 Gene3D G3DSA:3.40.120.10 310 444 1.7E-35 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS04845 7ea3047ebc4907afec9329757d7212eb 549 SUPERFAMILY SSF53738 26 235 3.06E-52 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS04845 7ea3047ebc4907afec9329757d7212eb 549 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 486 538 3.8E-8 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS04845 7ea3047ebc4907afec9329757d7212eb 549 Gene3D G3DSA:3.30.310.50 467 544 2.3E-30 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS04845 7ea3047ebc4907afec9329757d7212eb 549 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 321 439 9.3E-29 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS04845 7ea3047ebc4907afec9329757d7212eb 549 Gene3D G3DSA:3.40.120.10 226 309 2.7E-43 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS04845 7ea3047ebc4907afec9329757d7212eb 549 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 315 2.1E-16 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS04845 7ea3047ebc4907afec9329757d7212eb 549 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS04845 7ea3047ebc4907afec9329757d7212eb 549 SUPERFAMILY SSF53738 305 448 5.49E-33 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 PANTHER PTHR12428:SF14 167 537 7.2E-139 T 23-04-2016 VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 349 528 2.3E-72 T 23-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 PANTHER PTHR12428 167 537 7.2E-139 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 Pfam PF14849 YidC periplasmic domain 65 339 2.4E-83 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 Pfam PF02096 60Kd inner membrane protein 350 529 6.1E-63 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 PRINTS PR01900 YidC translocation/secretion protein signature 464 479 1.8E-26 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 PRINTS PR01900 YidC translocation/secretion protein signature 484 508 1.8E-26 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 PRINTS PR01900 YidC translocation/secretion protein signature 335 351 1.8E-26 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 PRINTS PR00701 60kDa inner membrane protein signature 213 231 6.6E-99 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 PRINTS PR00701 60kDa inner membrane protein signature 495 518 6.6E-99 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 PRINTS PR00701 60kDa inner membrane protein signature 70 91 6.6E-99 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 PRINTS PR00701 60kDa inner membrane protein signature 458 480 6.6E-99 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 PRINTS PR00701 60kDa inner membrane protein signature 320 340 6.6E-99 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 PRINTS PR00701 60kDa inner membrane protein signature 248 263 6.6E-99 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 PRINTS PR00701 60kDa inner membrane protein signature 2 23 6.6E-99 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 PRINTS PR00701 60kDa inner membrane protein signature 160 180 6.6E-99 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 PRINTS PR00701 60kDa inner membrane protein signature 411 434 6.6E-99 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 531 25.794 T 23-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 VV93_RS15360 104761f494cdf301b2ab719a85256e47 539 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 348 5.5E-111 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal VV93_RS02360 e7d4f5e2a9523f4f1cb1c04852dac8fd 601 SUPERFAMILY SSF56801 7 285 2.09E-113 T 23-04-2016 VV93_RS02360 e7d4f5e2a9523f4f1cb1c04852dac8fd 601 SUPERFAMILY SSF56801 336 596 2.09E-113 T 23-04-2016 VV93_RS02360 e7d4f5e2a9523f4f1cb1c04852dac8fd 601 PANTHER PTHR24096 8 600 8.1E-224 T 23-04-2016 VV93_RS02360 e7d4f5e2a9523f4f1cb1c04852dac8fd 601 Gene3D G3DSA:3.40.50.980 8 188 1.3E-31 T 23-04-2016 VV93_RS02360 e7d4f5e2a9523f4f1cb1c04852dac8fd 601 Gene3D G3DSA:3.40.50.980 333 388 1.2E-31 T 23-04-2016 VV93_RS02360 e7d4f5e2a9523f4f1cb1c04852dac8fd 601 Gene3D G3DSA:3.40.50.980 189 280 1.2E-31 T 23-04-2016 VV93_RS02360 e7d4f5e2a9523f4f1cb1c04852dac8fd 601 PANTHER PTHR24096:SF193 8 600 8.1E-224 T 23-04-2016 VV93_RS02360 e7d4f5e2a9523f4f1cb1c04852dac8fd 601 Pfam PF00501 AMP-binding enzyme 14 466 3.6E-99 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VV93_RS02360 e7d4f5e2a9523f4f1cb1c04852dac8fd 601 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 23-04-2016 IPR020845 AMP-binding, conserved site VV93_RS02360 e7d4f5e2a9523f4f1cb1c04852dac8fd 601 Gene3D G3DSA:2.30.38.10 401 460 3.7E-19 T 23-04-2016 VV93_RS02525 352c62e4c0ae14317e14e0ef739acde5 322 Pfam PF13280 WYL domain 156 309 2.8E-18 T 23-04-2016 IPR026881 WYL domain VV93_RS02525 352c62e4c0ae14317e14e0ef739acde5 322 PANTHER PTHR34580 3 309 8.7E-15 T 23-04-2016 VV93_RS12975 30211774b945d5438bf74e9b65c9b34a 386 PANTHER PTHR11406 1 386 7.4E-197 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VV93_RS12975 30211774b945d5438bf74e9b65c9b34a 386 Gene3D G3DSA:3.40.50.1260 5 174 1.7E-64 T 23-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VV93_RS12975 30211774b945d5438bf74e9b65c9b34a 386 Pfam PF00162 Phosphoglycerate kinase 6 373 1.6E-137 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VV93_RS12975 30211774b945d5438bf74e9b65c9b34a 386 PIRSF PIRSF000724 1 386 5.6E-134 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VV93_RS12975 30211774b945d5438bf74e9b65c9b34a 386 Gene3D G3DSA:3.40.50.1270 175 371 9.9E-80 T 23-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VV93_RS12975 30211774b945d5438bf74e9b65c9b34a 386 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 23-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VV93_RS12975 30211774b945d5438bf74e9b65c9b34a 386 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.4E-82 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VV93_RS12975 30211774b945d5438bf74e9b65c9b34a 386 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 1.4E-82 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VV93_RS12975 30211774b945d5438bf74e9b65c9b34a 386 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.4E-82 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VV93_RS12975 30211774b945d5438bf74e9b65c9b34a 386 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 1.4E-82 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VV93_RS12975 30211774b945d5438bf74e9b65c9b34a 386 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.4E-82 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VV93_RS12975 30211774b945d5438bf74e9b65c9b34a 386 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 1.4E-82 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VV93_RS12975 30211774b945d5438bf74e9b65c9b34a 386 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.4E-82 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VV93_RS12975 30211774b945d5438bf74e9b65c9b34a 386 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.4E-82 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VV93_RS12975 30211774b945d5438bf74e9b65c9b34a 386 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.4E-82 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VV93_RS12975 30211774b945d5438bf74e9b65c9b34a 386 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.281 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VV93_RS12975 30211774b945d5438bf74e9b65c9b34a 386 SUPERFAMILY SSF53748 3 382 1.18E-144 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VV93_RS06865 fabb479300a5f32f5267007298774ec8 831 Pfam PF00999 Sodium/hydrogen exchanger family 11 426 7.3E-62 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VV93_RS06865 fabb479300a5f32f5267007298774ec8 831 PANTHER PTHR10110 8 702 1.5E-164 T 23-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 VV93_RS06865 fabb479300a5f32f5267007298774ec8 831 Pfam PF00027 Cyclic nucleotide-binding domain 727 813 9.7E-7 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain VV93_RS06865 fabb479300a5f32f5267007298774ec8 831 SUPERFAMILY SSF51206 701 825 7.33E-14 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like VV93_RS06865 fabb479300a5f32f5267007298774ec8 831 Gene3D G3DSA:2.60.120.10 704 825 8.6E-14 T 23-04-2016 IPR014710 RmlC-like jelly roll fold VV93_RS06865 fabb479300a5f32f5267007298774ec8 831 PANTHER PTHR10110:SF86 8 702 1.5E-164 T 23-04-2016 VV93_RS15040 96fed50dea3d0faedee874e2abe1d3c7 161 SMART SM01001 1 152 2.5E-104 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VV93_RS15040 96fed50dea3d0faedee874e2abe1d3c7 161 SUPERFAMILY SSF52255 2 158 1.44E-66 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VV93_RS15040 96fed50dea3d0faedee874e2abe1d3c7 161 PANTHER PTHR23046:SF2 2 161 2.1E-85 T 23-04-2016 VV93_RS15040 96fed50dea3d0faedee874e2abe1d3c7 161 Gene3D G3DSA:3.40.50.7700 1 158 9.2E-75 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VV93_RS15040 96fed50dea3d0faedee874e2abe1d3c7 161 Pfam PF00731 AIR carboxylase 2 150 9.3E-65 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VV93_RS15040 96fed50dea3d0faedee874e2abe1d3c7 161 PANTHER PTHR23046 2 161 2.1E-85 T 23-04-2016 VV93_RS15040 96fed50dea3d0faedee874e2abe1d3c7 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 2.3E-67 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VV93_RS15040 96fed50dea3d0faedee874e2abe1d3c7 161 PIRSF PIRSF001338 1 160 1.4E-68 T 23-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 VV93_RS15040 96fed50dea3d0faedee874e2abe1d3c7 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.321 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 SMART SM01081 34 195 4.3E-90 T 23-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 Gene3D G3DSA:3.30.379.10 206 329 2.6E-23 T 23-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 3.4E-27 T 23-04-2016 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 PANTHER PTHR22600:SF12 567 774 1.0E-256 T 23-04-2016 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 PANTHER PTHR22600:SF12 151 392 1.0E-256 T 23-04-2016 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 PANTHER PTHR22600:SF12 792 882 1.0E-256 T 23-04-2016 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 PANTHER PTHR22600:SF12 415 538 1.0E-256 T 23-04-2016 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 SUPERFAMILY SSF51445 332 772 9.27E-144 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 Gene3D G3DSA:2.60.40.290 26 167 2.4E-59 T 23-04-2016 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain GO:0004553|GO:0030247 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 SUPERFAMILY SSF55545 208 331 4.06E-23 T 23-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 Gene3D G3DSA:2.60.40.320 833 882 6.7E-27 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 2.1E-13 T 23-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 7.3E-48 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 7.3E-48 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 7.3E-48 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 7.3E-48 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 7.3E-48 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 7.3E-48 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 7.3E-48 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 7.3E-48 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 2.3E-108 T 23-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 SUPERFAMILY SSF49384 26 198 3.98E-63 T 23-04-2016 IPR008965 Carbohydrate-binding domain GO:0030246 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 SUPERFAMILY SSF81296 781 882 4.2E-37 T 23-04-2016 IPR014756 Immunoglobulin E-set VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 Gene3D G3DSA:3.20.20.80 330 832 1.1E-157 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 2.6E-60 T 23-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 PANTHER PTHR22600 567 774 1.0E-256 T 23-04-2016 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 PANTHER PTHR22600 151 392 1.0E-256 T 23-04-2016 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 PANTHER PTHR22600 792 882 1.0E-256 T 23-04-2016 VV93_RS04485 5cc2ac98dd4e72fdf032ea72a254f5ee 883 PANTHER PTHR22600 415 538 1.0E-256 T 23-04-2016 VV93_RS14385 49314cb71613e1ee67e151d97df294f2 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 1.0E-64 T 23-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VV93_RS14385 49314cb71613e1ee67e151d97df294f2 127 Gene3D G3DSA:1.20.1300.10 1 127 4.2E-53 T 23-04-2016 VV93_RS14385 49314cb71613e1ee67e151d97df294f2 127 SUPERFAMILY SSF81343 1 127 4.14E-52 T 23-04-2016 VV93_RS14385 49314cb71613e1ee67e151d97df294f2 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.991 T 23-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VV93_RS14385 49314cb71613e1ee67e151d97df294f2 127 Pfam PF02300 Fumarate reductase subunit C 2 127 7.6E-49 T 23-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VV93_RS14385 49314cb71613e1ee67e151d97df294f2 127 PIRSF PIRSF000180 1 127 4.9E-58 T 23-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VV93_RS09195 7c4920d4f2d7aee072afa102464828cc 581 Pfam PF00005 ABC transporter 353 500 6.1E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS09195 7c4920d4f2d7aee072afa102464828cc 581 PANTHER PTHR24221:SF240 2 580 2.6E-177 T 23-04-2016 VV93_RS09195 7c4920d4f2d7aee072afa102464828cc 581 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS09195 7c4920d4f2d7aee072afa102464828cc 581 Gene3D G3DSA:3.40.50.300 337 565 2.8E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09195 7c4920d4f2d7aee072afa102464828cc 581 Gene3D G3DSA:1.20.1560.10 7 319 6.5E-68 T 23-04-2016 VV93_RS09195 7c4920d4f2d7aee072afa102464828cc 581 SMART SM00382 361 547 8.8E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS09195 7c4920d4f2d7aee072afa102464828cc 581 Pfam PF00664 ABC transporter transmembrane region 21 291 1.7E-45 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VV93_RS09195 7c4920d4f2d7aee072afa102464828cc 581 PANTHER PTHR24221 2 580 2.6E-177 T 23-04-2016 VV93_RS09195 7c4920d4f2d7aee072afa102464828cc 581 SUPERFAMILY SSF52540 336 572 2.92E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09195 7c4920d4f2d7aee072afa102464828cc 581 SUPERFAMILY SSF90123 7 325 2.62E-70 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VV93_RS01415 c00037fb81fe758ea55c92fe2a19cb71 405 SUPERFAMILY SSF56349 97 394 4.41E-50 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS01415 c00037fb81fe758ea55c92fe2a19cb71 405 Gene3D G3DSA:1.10.443.10 203 392 4.2E-24 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS01415 c00037fb81fe758ea55c92fe2a19cb71 405 PANTHER PTHR30629 1 401 5.3E-77 T 23-04-2016 VV93_RS01415 c00037fb81fe758ea55c92fe2a19cb71 405 Pfam PF13356 Domain of unknown function (DUF4102) 5 90 1.6E-16 T 23-04-2016 IPR025166 Domain of unknown function DUF4102 VV93_RS01415 c00037fb81fe758ea55c92fe2a19cb71 405 Gene3D G3DSA:1.10.150.130 97 188 1.9E-11 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal VV93_RS01415 c00037fb81fe758ea55c92fe2a19cb71 405 Pfam PF00589 Phage integrase family 205 374 1.3E-13 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS12165 16f808cf061135e7e609f9aef17fad93 443 Pfam PF01554 MatE 240 398 1.0E-8 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VV93_RS12165 16f808cf061135e7e609f9aef17fad93 443 Pfam PF01554 MatE 15 176 9.1E-27 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VV93_RS12165 16f808cf061135e7e609f9aef17fad93 443 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 5.0E-48 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VV93_RS12165 16f808cf061135e7e609f9aef17fad93 443 PIRSF PIRSF006603 1 441 2.6E-66 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VV93_RS12165 16f808cf061135e7e609f9aef17fad93 443 PANTHER PTHR11206:SF132 1 439 1.9E-123 T 23-04-2016 VV93_RS12165 16f808cf061135e7e609f9aef17fad93 443 PANTHER PTHR11206 1 439 1.9E-123 T 23-04-2016 VV93_RS09015 2996d9fac30211e68572fb9cc2fe35f9 279 Pfam PF08666 SAF domain 44 110 6.5E-5 T 23-04-2016 IPR013974 SAF domain VV93_RS09015 2996d9fac30211e68572fb9cc2fe35f9 279 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 11 277 7.7E-64 T 23-04-2016 IPR017592 Pilus assembly, Flp-type CpaB VV93_RS09015 2996d9fac30211e68572fb9cc2fe35f9 279 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 118 235 1.1E-27 T 23-04-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain VV93_RS09015 2996d9fac30211e68572fb9cc2fe35f9 279 SMART SM00858 43 111 3.5E-5 T 23-04-2016 IPR013974 SAF domain VV93_RS08030 8cd86137eb2e9df26caf240026c9fe59 371 PANTHER PTHR24220 13 312 2.5E-158 T 23-04-2016 VV93_RS08030 8cd86137eb2e9df26caf240026c9fe59 371 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS08030 8cd86137eb2e9df26caf240026c9fe59 371 PANTHER PTHR24220:SF150 13 312 2.5E-158 T 23-04-2016 VV93_RS08030 8cd86137eb2e9df26caf240026c9fe59 371 Pfam PF08402 TOBE domain 286 365 1.3E-11 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 VV93_RS08030 8cd86137eb2e9df26caf240026c9fe59 371 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 42 365 6.2E-156 T 23-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 VV93_RS08030 8cd86137eb2e9df26caf240026c9fe59 371 SMART SM00382 36 219 9.4E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS08030 8cd86137eb2e9df26caf240026c9fe59 371 Gene3D G3DSA:3.40.50.300 8 244 3.5E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08030 8cd86137eb2e9df26caf240026c9fe59 371 Pfam PF00005 ABC transporter 29 168 3.6E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS08030 8cd86137eb2e9df26caf240026c9fe59 371 SUPERFAMILY SSF50331 245 365 3.8E-8 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal VV93_RS08030 8cd86137eb2e9df26caf240026c9fe59 371 SUPERFAMILY SSF52540 12 249 3.59E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09020 85e6ba576c394c276f1fc370668f7e00 143 Pfam PF01478 Type IV leader peptidase family 10 109 2.2E-8 T 23-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VV93_RS05215 3a0e1e0d78a7270e8dcde08a7d1b8210 371 SMART SM00382 30 214 1.8E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS05215 3a0e1e0d78a7270e8dcde08a7d1b8210 371 SUPERFAMILY SSF50331 238 368 2.09E-23 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal VV93_RS05215 3a0e1e0d78a7270e8dcde08a7d1b8210 371 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS05215 3a0e1e0d78a7270e8dcde08a7d1b8210 371 SUPERFAMILY SSF52540 4 245 5.9E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05215 3a0e1e0d78a7270e8dcde08a7d1b8210 371 Gene3D G3DSA:2.40.50.100 354 368 2.3E-8 T 23-04-2016 VV93_RS05215 3a0e1e0d78a7270e8dcde08a7d1b8210 371 Gene3D G3DSA:2.40.50.100 241 290 2.3E-8 T 23-04-2016 VV93_RS05215 3a0e1e0d78a7270e8dcde08a7d1b8210 371 Gene3D G3DSA:3.40.50.300 3 236 4.3E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05215 3a0e1e0d78a7270e8dcde08a7d1b8210 371 PANTHER PTHR24220:SF446 5 293 6.5E-163 T 23-04-2016 VV93_RS05215 3a0e1e0d78a7270e8dcde08a7d1b8210 371 Pfam PF00005 ABC transporter 21 163 1.0E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS05215 3a0e1e0d78a7270e8dcde08a7d1b8210 371 Gene3D G3DSA:2.40.50.140 291 353 2.6E-11 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS05215 3a0e1e0d78a7270e8dcde08a7d1b8210 371 PANTHER PTHR24220 5 293 6.5E-163 T 23-04-2016 VV93_RS05260 e141d84fd34d7cddf77908c2905484c9 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 3.7E-210 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VV93_RS05260 e141d84fd34d7cddf77908c2905484c9 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 3.0E-21 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VV93_RS05260 e141d84fd34d7cddf77908c2905484c9 426 SMART SM00382 113 266 2.0E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS05260 e141d84fd34d7cddf77908c2905484c9 426 Gene3D G3DSA:1.10.8.60 318 418 1.4E-37 T 23-04-2016 VV93_RS05260 e141d84fd34d7cddf77908c2905484c9 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 2.2E-15 T 23-04-2016 IPR019489 Clp ATPase, C-terminal VV93_RS05260 e141d84fd34d7cddf77908c2905484c9 426 SMART SM01086 319 414 7.7E-34 T 23-04-2016 IPR019489 Clp ATPase, C-terminal VV93_RS05260 e141d84fd34d7cddf77908c2905484c9 426 SMART SM00994 13 52 1.0E-24 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VV93_RS05260 e141d84fd34d7cddf77908c2905484c9 426 PANTHER PTHR11262 11 423 6.0E-252 T 23-04-2016 VV93_RS05260 e141d84fd34d7cddf77908c2905484c9 426 Gene3D G3DSA:3.40.50.300 296 312 7.8E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05260 e141d84fd34d7cddf77908c2905484c9 426 Gene3D G3DSA:3.40.50.300 67 255 7.8E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05260 e141d84fd34d7cddf77908c2905484c9 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 23-04-2016 VV93_RS05260 e141d84fd34d7cddf77908c2905484c9 426 SUPERFAMILY SSF52540 63 404 7.34E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05260 e141d84fd34d7cddf77908c2905484c9 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 2.5E-48 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VV93_RS05260 e141d84fd34d7cddf77908c2905484c9 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 53.477 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VV93_RS02805 ebcdbb49a3900d4b8fe65820b763d359 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 395 1.3E-12 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VV93_RS02805 ebcdbb49a3900d4b8fe65820b763d359 453 PANTHER PTHR23135:SF3 11 450 9.1E-155 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS02805 ebcdbb49a3900d4b8fe65820b763d359 453 SUPERFAMILY SSF53623 100 311 2.75E-57 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02805 ebcdbb49a3900d4b8fe65820b763d359 453 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 448 4.7E-144 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS02805 ebcdbb49a3900d4b8fe65820b763d359 453 PANTHER PTHR23135 11 450 9.1E-155 T 23-04-2016 VV93_RS02805 ebcdbb49a3900d4b8fe65820b763d359 453 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 449 33.196 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS02805 ebcdbb49a3900d4b8fe65820b763d359 453 SUPERFAMILY SSF63418 1 96 2.22E-24 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02805 ebcdbb49a3900d4b8fe65820b763d359 453 Gene3D G3DSA:3.40.1390.10 1 80 1.6E-23 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02805 ebcdbb49a3900d4b8fe65820b763d359 453 Pfam PF01225 Mur ligase family, catalytic domain 27 80 7.8E-8 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02805 ebcdbb49a3900d4b8fe65820b763d359 453 Pfam PF08245 Mur ligase middle domain 105 293 5.9E-48 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02805 ebcdbb49a3900d4b8fe65820b763d359 453 SUPERFAMILY SSF53244 314 448 9.77E-35 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VV93_RS02805 ebcdbb49a3900d4b8fe65820b763d359 453 Gene3D G3DSA:3.90.190.20 313 451 4.6E-41 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VV93_RS02805 ebcdbb49a3900d4b8fe65820b763d359 453 Gene3D G3DSA:3.40.1190.10 82 308 8.6E-72 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS03395 649486e48785ce9bb91804d9f2c84ced 304 PANTHER PTHR38103:SF1 2 304 2.5E-160 T 23-04-2016 VV93_RS03395 649486e48785ce9bb91804d9f2c84ced 304 PANTHER PTHR38103 2 304 2.5E-160 T 23-04-2016 VV93_RS03395 649486e48785ce9bb91804d9f2c84ced 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 39.488 T 23-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 VV93_RS03395 649486e48785ce9bb91804d9f2c84ced 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 2.4E-126 T 23-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 VV93_RS10320 38f0b5ee280e38a552af7e60a429274c 260 PANTHER PTHR30269 4 260 4.3E-153 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VV93_RS10320 38f0b5ee280e38a552af7e60a429274c 260 Pfam PF01925 Sulfite exporter TauE/SafE 12 251 2.1E-45 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VV93_RS10320 38f0b5ee280e38a552af7e60a429274c 260 PANTHER PTHR30269:SF25 4 260 4.3E-153 T 23-04-2016 VV93_RS01840 5273cc45afa3f4f8b8c3e126ef70d552 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 6.5E-24 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01840 5273cc45afa3f4f8b8c3e126ef70d552 63 SUPERFAMILY SSF46561 1 61 2.62E-23 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01840 5273cc45afa3f4f8b8c3e126ef70d552 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 23-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01840 5273cc45afa3f4f8b8c3e126ef70d552 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.125 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01840 5273cc45afa3f4f8b8c3e126ef70d552 63 PANTHER PTHR10916 1 63 3.6E-31 T 23-04-2016 VV93_RS01840 5273cc45afa3f4f8b8c3e126ef70d552 63 Pfam PF00831 Ribosomal L29 protein 4 60 2.3E-25 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01840 5273cc45afa3f4f8b8c3e126ef70d552 63 Gene3D G3DSA:1.10.287.310 1 60 6.4E-30 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS10565 26cb5e756dfb885468defd4049d0c820 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 23-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VV93_RS10565 26cb5e756dfb885468defd4049d0c820 711 PANTHER PTHR11751 482 490 6.6E-252 T 23-04-2016 VV93_RS10565 26cb5e756dfb885468defd4049d0c820 711 PANTHER PTHR11751 510 630 6.6E-252 T 23-04-2016 VV93_RS10565 26cb5e756dfb885468defd4049d0c820 711 PANTHER PTHR11751 131 459 6.6E-252 T 23-04-2016 VV93_RS10565 26cb5e756dfb885468defd4049d0c820 711 PANTHER PTHR11751:SF406 482 490 6.6E-252 T 23-04-2016 VV93_RS10565 26cb5e756dfb885468defd4049d0c820 711 PANTHER PTHR11751:SF406 510 630 6.6E-252 T 23-04-2016 VV93_RS10565 26cb5e756dfb885468defd4049d0c820 711 PANTHER PTHR11751:SF406 131 459 6.6E-252 T 23-04-2016 VV93_RS10565 26cb5e756dfb885468defd4049d0c820 711 Gene3D G3DSA:3.40.640.10 130 423 4.4E-100 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS10565 26cb5e756dfb885468defd4049d0c820 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 2.0E-29 T 23-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 VV93_RS10565 26cb5e756dfb885468defd4049d0c820 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 2.5E-44 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VV93_RS10565 26cb5e756dfb885468defd4049d0c820 711 SUPERFAMILY SSF53383 130 562 7.24E-106 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS10565 26cb5e756dfb885468defd4049d0c820 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.5E-186 T 23-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VV93_RS10565 26cb5e756dfb885468defd4049d0c820 711 SUPERFAMILY SSF55904 568 708 1.44E-42 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VV93_RS10565 26cb5e756dfb885468defd4049d0c820 711 Gene3D G3DSA:3.90.1150.10 425 587 5.9E-66 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS10565 26cb5e756dfb885468defd4049d0c820 711 Gene3D G3DSA:3.90.100.10 588 709 1.1E-36 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VV93_RS10565 26cb5e756dfb885468defd4049d0c820 711 PIRSF PIRSF009393 1 711 9.9E-288 T 23-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 Gene3D G3DSA:2.40.37.10 227 370 5.2E-57 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 Hamap MF_01201 Alanine racemase. 15 371 35.359 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 Pfam PF01168 Alanine racemase, N-terminal domain 22 233 7.0E-69 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 PANTHER PTHR30511 12 370 3.3E-229 T 23-04-2016 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 TIGRFAM TIGR00492 alr: alanine racemase 17 370 4.9E-129 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 PANTHER PTHR30511:SF4 12 370 3.3E-229 T 23-04-2016 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 SUPERFAMILY SSF50621 241 370 9.42E-48 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 SUPERFAMILY SSF51419 22 248 2.88E-69 T 23-04-2016 IPR029066 PLP-binding barrel VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 PRINTS PR00992 Alanine racemase signature 263 278 1.7E-70 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 PRINTS PR00992 Alanine racemase signature 134 146 1.7E-70 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 PRINTS PR00992 Alanine racemase signature 353 366 1.7E-70 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 PRINTS PR00992 Alanine racemase signature 74 92 1.7E-70 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 PRINTS PR00992 Alanine racemase signature 169 180 1.7E-70 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 PRINTS PR00992 Alanine racemase signature 40 56 1.7E-70 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 PRINTS PR00992 Alanine racemase signature 280 295 1.7E-70 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 PRINTS PR00992 Alanine racemase signature 206 233 1.7E-70 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 PRINTS PR00992 Alanine racemase signature 301 318 1.7E-70 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 Pfam PF00842 Alanine racemase, C-terminal domain 247 370 9.6E-41 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 SMART SM01005 247 371 6.9E-70 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 Gene3D G3DSA:3.20.20.10 26 226 7.5E-72 T 23-04-2016 IPR029066 PLP-binding barrel VV93_RS13750 ec085e7a68e5e6f3f4cbfc48906d6b62 372 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 45 55 - T 23-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VV93_RS14460 adcc4e12d7059d877c67faaaaa145273 202 SUPERFAMILY SSF46609 1 86 5.37E-30 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS14460 adcc4e12d7059d877c67faaaaa145273 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 5.7E-27 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS14460 adcc4e12d7059d877c67faaaaa145273 202 PIRSF PIRSF000349 1 202 8.4E-82 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS14460 adcc4e12d7059d877c67faaaaa145273 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 23-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS14460 adcc4e12d7059d877c67faaaaa145273 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 5.1E-39 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS14460 adcc4e12d7059d877c67faaaaa145273 202 SUPERFAMILY SSF54719 87 201 2.62E-43 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS14460 adcc4e12d7059d877c67faaaaa145273 202 PANTHER PTHR11404 1 201 8.5E-96 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS14460 adcc4e12d7059d877c67faaaaa145273 202 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 3.4E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS14460 adcc4e12d7059d877c67faaaaa145273 202 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 3.4E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS14460 adcc4e12d7059d877c67faaaaa145273 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.4E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS14460 adcc4e12d7059d877c67faaaaa145273 202 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 3.4E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS14460 adcc4e12d7059d877c67faaaaa145273 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.4E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS14460 adcc4e12d7059d877c67faaaaa145273 202 Gene3D G3DSA:1.10.287.990 20 85 3.8E-22 T 23-04-2016 VV93_RS17090 b27a39927cca7deb1fc04dd303513d87 239 Pfam PF01203 Type II secretion system (T2SS), protein N 23 163 1.5E-6 T 23-04-2016 IPR022792 Type II secretion system, protein N VV93_RS17090 b27a39927cca7deb1fc04dd303513d87 239 PANTHER PTHR36985 3 233 4.9E-49 T 23-04-2016 VV93_RS17090 b27a39927cca7deb1fc04dd303513d87 239 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 140 228 5.8E-8 T 23-04-2016 IPR007452 Translocation and assembly module TamB VV93_RS05810 ec563f8e01c5f70127a395fe9cb78032 187 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.429 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 VV93_RS05810 ec563f8e01c5f70127a395fe9cb78032 187 PANTHER PTHR36917 1 185 7.3E-73 T 23-04-2016 VV93_RS05810 ec563f8e01c5f70127a395fe9cb78032 187 PANTHER PTHR36917:SF1 1 185 7.3E-73 T 23-04-2016 VV93_RS05810 ec563f8e01c5f70127a395fe9cb78032 187 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 176 8.7E-64 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 VV93_RS05810 ec563f8e01c5f70127a395fe9cb78032 187 Pfam PF04279 Intracellular septation protein A 1 174 4.4E-68 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 VV93_RS12315 e70f1ae85673e20bf2996d7e29e23547 364 Gene3D G3DSA:2.40.50.100 167 203 3.3E-17 T 23-04-2016 VV93_RS12315 e70f1ae85673e20bf2996d7e29e23547 364 Gene3D G3DSA:2.40.50.100 74 109 3.3E-17 T 23-04-2016 VV93_RS12315 e70f1ae85673e20bf2996d7e29e23547 364 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 273 6.1E-20 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV93_RS12315 e70f1ae85673e20bf2996d7e29e23547 364 PANTHER PTHR30469:SF15 1 353 1.1E-76 T 23-04-2016 VV93_RS12315 e70f1ae85673e20bf2996d7e29e23547 364 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 60 354 9.4E-46 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VV93_RS12315 e70f1ae85673e20bf2996d7e29e23547 364 PANTHER PTHR30469 1 353 1.1E-76 T 23-04-2016 VV93_RS12315 e70f1ae85673e20bf2996d7e29e23547 364 SUPERFAMILY SSF111369 67 281 1.7E-28 T 23-04-2016 VV93_RS10685 1390b412d193be117aa957cb9cf0deee 2424 SUPERFAMILY SSF69318 462 639 1.31E-8 T 23-04-2016 VV93_RS10685 1390b412d193be117aa957cb9cf0deee 2424 SUPERFAMILY SSF69318 296 428 1.31E-8 T 23-04-2016 VV93_RS10685 1390b412d193be117aa957cb9cf0deee 2424 Pfam PF05593 RHS Repeat 1350 1381 3.7E-5 T 23-04-2016 IPR031325 RHS repeat VV93_RS10685 1390b412d193be117aa957cb9cf0deee 2424 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2023 2112 4.1E-17 T 23-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 VV93_RS10685 1390b412d193be117aa957cb9cf0deee 2424 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1350 1381 2.3E-5 T 23-04-2016 IPR006530 YD repeat VV93_RS14640 08bc099815f4fa8b2ecd16c8df1f6758 261 PANTHER PTHR22769 90 261 3.4E-56 T 23-04-2016 VV93_RS14640 08bc099815f4fa8b2ecd16c8df1f6758 261 Hamap MF_00297 NADH pyrophosphatase [nudC]. 3 260 41.853 T 23-04-2016 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 VV93_RS14640 08bc099815f4fa8b2ecd16c8df1f6758 261 SUPERFAMILY SSF55811 62 248 3.93E-45 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS14640 08bc099815f4fa8b2ecd16c8df1f6758 261 ProSitePatterns PS00893 Nudix box signature. 164 185 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VV93_RS14640 08bc099815f4fa8b2ecd16c8df1f6758 261 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 99 129 2.3E-10 T 23-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 VV93_RS14640 08bc099815f4fa8b2ecd16c8df1f6758 261 PANTHER PTHR22769:SF7 90 261 3.4E-56 T 23-04-2016 VV93_RS14640 08bc099815f4fa8b2ecd16c8df1f6758 261 Pfam PF00293 NUDIX domain 137 236 8.8E-19 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VV93_RS14640 08bc099815f4fa8b2ecd16c8df1f6758 261 PRINTS PR00502 NUDIX hydrolase family signature 173 188 3.0E-5 T 23-04-2016 IPR020476 NUDIX hydrolase VV93_RS14640 08bc099815f4fa8b2ecd16c8df1f6758 261 PRINTS PR00502 NUDIX hydrolase family signature 159 173 3.0E-5 T 23-04-2016 IPR020476 NUDIX hydrolase VV93_RS14640 08bc099815f4fa8b2ecd16c8df1f6758 261 Gene3D G3DSA:3.90.79.10 97 251 1.9E-42 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS11680 a491d098ed65030ea0c464908f246a32 197 PANTHER PTHR30173 6 193 1.0E-62 T 23-04-2016 VV93_RS11680 a491d098ed65030ea0c464908f246a32 197 Pfam PF04542 Sigma-70 region 2 36 102 7.7E-16 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS11680 a491d098ed65030ea0c464908f246a32 197 PANTHER PTHR30173:SF31 6 193 1.0E-62 T 23-04-2016 VV93_RS11680 a491d098ed65030ea0c464908f246a32 197 SUPERFAMILY SSF88946 9 118 2.16E-25 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS11680 a491d098ed65030ea0c464908f246a32 197 Pfam PF04545 Sigma-70, region 4 142 190 4.0E-14 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS11680 a491d098ed65030ea0c464908f246a32 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 190 1.4E-27 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS11680 a491d098ed65030ea0c464908f246a32 197 Gene3D G3DSA:1.10.10.10 130 193 4.0E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS11680 a491d098ed65030ea0c464908f246a32 197 Gene3D G3DSA:1.10.1740.10 11 111 1.2E-23 T 23-04-2016 VV93_RS11680 a491d098ed65030ea0c464908f246a32 197 SUPERFAMILY SSF88659 130 192 6.35E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.0E-52 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 1.0E-52 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 1.0E-52 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 1.0E-52 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.0E-52 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.0E-52 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.0E-52 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 1.0E-52 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 SUPERFAMILY SSF100920 384 537 4.58E-52 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 Gene3D G3DSA:3.30.30.30 70 121 3.8E-9 T 23-04-2016 VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 Pfam PF00012 Hsp70 protein 22 601 5.0E-187 T 23-04-2016 IPR013126 Heat shock protein 70 family VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 Gene3D G3DSA:1.20.1270.10 529 615 3.8E-29 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 SUPERFAMILY SSF53067 200 377 5.73E-48 T 23-04-2016 VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 Gene3D G3DSA:3.30.420.40 314 356 9.6E-31 T 23-04-2016 VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 Gene3D G3DSA:3.30.420.40 206 238 9.6E-31 T 23-04-2016 VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 46.279 T 23-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 PANTHER PTHR19375:SF176 19 617 0.0 T 23-04-2016 VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 PANTHER PTHR19375 19 617 0.0 T 23-04-2016 VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 SUPERFAMILY SSF53067 20 196 3.37E-50 T 23-04-2016 VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 Gene3D G3DSA:3.90.640.10 239 309 5.0E-5 T 23-04-2016 VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 7.0E-266 T 23-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 SUPERFAMILY SSF100934 504 615 6.08E-34 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 Gene3D G3DSA:3.30.420.40 133 205 4.2E-52 T 23-04-2016 VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 Gene3D G3DSA:3.30.420.40 22 69 4.2E-52 T 23-04-2016 VV93_RS03575 d7dc4d462f96dfcfe32f5bb6924f94b2 617 Gene3D G3DSA:2.60.34.10 387 528 7.8E-56 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VV93_RS05425 e7c497721520b662880ac4374a349502 288 SUPERFAMILY SSF54637 6 114 6.67E-39 T 23-04-2016 IPR029069 HotDog domain VV93_RS05425 e7c497721520b662880ac4374a349502 288 PANTHER PTHR11066 5 284 1.1E-114 T 23-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 VV93_RS05425 e7c497721520b662880ac4374a349502 288 Gene3D G3DSA:3.10.129.10 4 116 2.0E-45 T 23-04-2016 IPR029069 HotDog domain VV93_RS05425 e7c497721520b662880ac4374a349502 288 PANTHER PTHR11066:SF34 5 284 1.1E-114 T 23-04-2016 VV93_RS05425 e7c497721520b662880ac4374a349502 288 SUPERFAMILY SSF54637 116 283 7.88E-59 T 23-04-2016 IPR029069 HotDog domain VV93_RS05425 e7c497721520b662880ac4374a349502 288 Gene3D G3DSA:3.10.129.10 125 284 5.9E-58 T 23-04-2016 IPR029069 HotDog domain VV93_RS05425 e7c497721520b662880ac4374a349502 288 Pfam PF13622 Thioesterase-like superfamily 33 282 5.0E-59 T 23-04-2016 VV93_RS05425 e7c497721520b662880ac4374a349502 288 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 3.8E-94 T 23-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 VV93_RS13090 299161419ea7dcafa0c3050a6f27149a 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 1.8E-129 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VV93_RS13090 299161419ea7dcafa0c3050a6f27149a 306 SUPERFAMILY SSF56601 3 306 7.92E-115 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS13090 299161419ea7dcafa0c3050a6f27149a 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.389 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VV93_RS13090 299161419ea7dcafa0c3050a6f27149a 306 Pfam PF04960 Glutaminase 22 306 1.3E-112 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VV93_RS13090 299161419ea7dcafa0c3050a6f27149a 306 PANTHER PTHR12544 6 306 8.0E-158 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VV93_RS13090 299161419ea7dcafa0c3050a6f27149a 306 Gene3D G3DSA:3.40.710.10 2 306 6.7E-125 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS02365 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 170 7.1E-60 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VV93_RS02365 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 SUPERFAMILY SSF52518 373 567 5.33E-68 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS02365 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 569 1.6E-273 T 23-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS02365 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 1.9E-50 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VV93_RS02365 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 SUPERFAMILY SSF52518 2 180 3.07E-65 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS02365 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 Gene3D G3DSA:3.40.50.1220 192 359 9.6E-68 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VV93_RS02365 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 PANTHER PTHR18968 4 574 0.0 T 23-04-2016 VV93_RS02365 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 332 1.4E-47 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VV93_RS02365 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 SUPERFAMILY SSF52467 191 364 5.07E-64 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VV93_RS02365 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 Gene3D G3DSA:3.40.50.970 4 179 1.2E-75 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS02365 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 Gene3D G3DSA:3.40.50.970 360 558 6.4E-75 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS02365 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 PANTHER PTHR18968:SF116 4 574 0.0 T 23-04-2016 VV93_RS02365 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 23-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VV93_RS08665 415ce181aa83ee4c3097381f21c3b212 320 Gene3D G3DSA:1.10.443.10 105 307 1.7E-48 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS08665 415ce181aa83ee4c3097381f21c3b212 320 Gene3D G3DSA:1.10.150.130 11 80 6.4E-6 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal VV93_RS08665 415ce181aa83ee4c3097381f21c3b212 320 PANTHER PTHR30349:SF28 9 180 1.2E-117 T 23-04-2016 VV93_RS08665 415ce181aa83ee4c3097381f21c3b212 320 PANTHER PTHR30349:SF28 199 308 1.2E-117 T 23-04-2016 VV93_RS08665 415ce181aa83ee4c3097381f21c3b212 320 Pfam PF00589 Phage integrase family 105 306 3.2E-45 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS08665 415ce181aa83ee4c3097381f21c3b212 320 TIGRFAM TIGR02249 integrase_gron: integron integrase 5 320 2.3E-143 T 23-04-2016 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 VV93_RS08665 415ce181aa83ee4c3097381f21c3b212 320 PANTHER PTHR30349 9 180 1.2E-117 T 23-04-2016 VV93_RS08665 415ce181aa83ee4c3097381f21c3b212 320 PANTHER PTHR30349 199 308 1.2E-117 T 23-04-2016 VV93_RS08665 415ce181aa83ee4c3097381f21c3b212 320 SUPERFAMILY SSF56349 214 315 2.33E-47 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS08665 415ce181aa83ee4c3097381f21c3b212 320 SUPERFAMILY SSF56349 100 185 2.33E-47 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS08665 415ce181aa83ee4c3097381f21c3b212 320 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 8 87 3.2E-23 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VV93_RS00910 772e18e4e6af01cfb06020eecdf0bda0 544 Pfam PF03109 ABC1 family 112 231 3.9E-36 T 23-04-2016 IPR004147 UbiB domain VV93_RS00910 772e18e4e6af01cfb06020eecdf0bda0 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 8.8E-176 T 23-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 VV93_RS00910 772e18e4e6af01cfb06020eecdf0bda0 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.94 T 23-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 VV93_RS00910 772e18e4e6af01cfb06020eecdf0bda0 544 SUPERFAMILY SSF56112 94 158 2.29E-45 T 23-04-2016 IPR011009 Protein kinase-like domain VV93_RS00910 772e18e4e6af01cfb06020eecdf0bda0 544 SUPERFAMILY SSF56112 193 436 2.29E-45 T 23-04-2016 IPR011009 Protein kinase-like domain VV93_RS00910 772e18e4e6af01cfb06020eecdf0bda0 544 PANTHER PTHR10566:SF79 1 458 4.5E-283 T 23-04-2016 VV93_RS00910 772e18e4e6af01cfb06020eecdf0bda0 544 PANTHER PTHR10566 1 458 4.5E-283 T 23-04-2016 VV93_RS00795 4940a1104f5faf73c81a1a62b9c9eb6c 602 SUPERFAMILY SSF49373 128 203 5.1E-10 T 23-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments VV93_RS00795 4940a1104f5faf73c81a1a62b9c9eb6c 602 SMART SM00635 128 209 2.2E-11 T 23-04-2016 IPR003343 Bacterial Ig-like, group 2 VV93_RS00795 4940a1104f5faf73c81a1a62b9c9eb6c 602 SMART SM00635 43 122 1.5E-4 T 23-04-2016 IPR003343 Bacterial Ig-like, group 2 VV93_RS00795 4940a1104f5faf73c81a1a62b9c9eb6c 602 SMART SM00635 215 296 2.2E-11 T 23-04-2016 IPR003343 Bacterial Ig-like, group 2 VV93_RS00795 4940a1104f5faf73c81a1a62b9c9eb6c 602 SMART SM00635 302 383 2.4E-10 T 23-04-2016 IPR003343 Bacterial Ig-like, group 2 VV93_RS00795 4940a1104f5faf73c81a1a62b9c9eb6c 602 Pfam PF02368 Bacterial Ig-like domain (group 2) 303 373 1.6E-11 T 23-04-2016 IPR003343 Bacterial Ig-like, group 2 VV93_RS00795 4940a1104f5faf73c81a1a62b9c9eb6c 602 Pfam PF02368 Bacterial Ig-like domain (group 2) 129 201 9.5E-12 T 23-04-2016 IPR003343 Bacterial Ig-like, group 2 VV93_RS00795 4940a1104f5faf73c81a1a62b9c9eb6c 602 Pfam PF02368 Bacterial Ig-like domain (group 2) 216 288 9.5E-12 T 23-04-2016 IPR003343 Bacterial Ig-like, group 2 VV93_RS00795 4940a1104f5faf73c81a1a62b9c9eb6c 602 SUPERFAMILY SSF49373 215 290 4.32E-10 T 23-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments VV93_RS00795 4940a1104f5faf73c81a1a62b9c9eb6c 602 SUPERFAMILY SSF49373 302 375 4.32E-10 T 23-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments VV93_RS00795 4940a1104f5faf73c81a1a62b9c9eb6c 602 Gene3D G3DSA:2.60.40.1080 51 124 2.4E-5 T 23-04-2016 VV93_RS00795 4940a1104f5faf73c81a1a62b9c9eb6c 602 Gene3D G3DSA:2.60.40.1080 128 211 3.3E-12 T 23-04-2016 VV93_RS00795 4940a1104f5faf73c81a1a62b9c9eb6c 602 Gene3D G3DSA:2.60.40.1080 302 385 3.1E-12 T 23-04-2016 VV93_RS00795 4940a1104f5faf73c81a1a62b9c9eb6c 602 Gene3D G3DSA:2.60.40.1080 215 298 3.3E-12 T 23-04-2016 VV93_RS15030 575f30b23c352056f22956ccdc79605e 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 23-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VV93_RS15030 575f30b23c352056f22956ccdc79605e 305 PIRSF PIRSF000166 2 305 5.6E-129 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VV93_RS15030 575f30b23c352056f22956ccdc79605e 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 55.895 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VV93_RS15030 575f30b23c352056f22956ccdc79605e 305 PRINTS PR00073 Coprogen oxidase signature 266 292 3.7E-69 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VV93_RS15030 575f30b23c352056f22956ccdc79605e 305 PRINTS PR00073 Coprogen oxidase signature 166 195 3.7E-69 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VV93_RS15030 575f30b23c352056f22956ccdc79605e 305 PRINTS PR00073 Coprogen oxidase signature 238 265 3.7E-69 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VV93_RS15030 575f30b23c352056f22956ccdc79605e 305 PRINTS PR00073 Coprogen oxidase signature 129 151 3.7E-69 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VV93_RS15030 575f30b23c352056f22956ccdc79605e 305 PRINTS PR00073 Coprogen oxidase signature 31 47 3.7E-69 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VV93_RS15030 575f30b23c352056f22956ccdc79605e 305 PRINTS PR00073 Coprogen oxidase signature 94 118 3.7E-69 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VV93_RS15030 575f30b23c352056f22956ccdc79605e 305 SUPERFAMILY SSF102886 5 305 6.54E-138 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VV93_RS15030 575f30b23c352056f22956ccdc79605e 305 Pfam PF01218 Coproporphyrinogen III oxidase 9 305 3.0E-132 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VV93_RS15030 575f30b23c352056f22956ccdc79605e 305 Gene3D G3DSA:3.40.1500.10 5 305 5.9E-137 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VV93_RS15030 575f30b23c352056f22956ccdc79605e 305 PANTHER PTHR10755 6 305 5.6E-184 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VV93_RS10045 37e93db221ab526ef362f502a5931bd0 449 Pfam PF04052 TolB amino-terminal domain 25 126 3.2E-35 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VV93_RS10045 37e93db221ab526ef362f502a5931bd0 449 PANTHER PTHR11731:SF123 179 447 3.1E-122 T 23-04-2016 VV93_RS10045 37e93db221ab526ef362f502a5931bd0 449 Gene3D G3DSA:3.40.50.10070 24 171 1.9E-52 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VV93_RS10045 37e93db221ab526ef362f502a5931bd0 449 SUPERFAMILY SSF52964 29 180 7.98E-42 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VV93_RS10045 37e93db221ab526ef362f502a5931bd0 449 Pfam PF07676 WD40-like Beta Propeller Repeat 299 335 2.6E-13 T 23-04-2016 IPR011659 WD40-like Beta Propeller VV93_RS10045 37e93db221ab526ef362f502a5931bd0 449 Pfam PF07676 WD40-like Beta Propeller Repeat 256 291 1.7E-10 T 23-04-2016 IPR011659 WD40-like Beta Propeller VV93_RS10045 37e93db221ab526ef362f502a5931bd0 449 Pfam PF07676 WD40-like Beta Propeller Repeat 221 247 4.6E-8 T 23-04-2016 IPR011659 WD40-like Beta Propeller VV93_RS10045 37e93db221ab526ef362f502a5931bd0 449 PANTHER PTHR11731 1 122 3.1E-122 T 23-04-2016 VV93_RS10045 37e93db221ab526ef362f502a5931bd0 449 Gene3D G3DSA:2.130.10.10 172 447 2.4E-79 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VV93_RS10045 37e93db221ab526ef362f502a5931bd0 449 SUPERFAMILY SSF69304 175 447 1.57E-57 T 23-04-2016 VV93_RS10045 37e93db221ab526ef362f502a5931bd0 449 Hamap MF_00671 Protein TolB [tolB]. 6 445 35.654 T 23-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 VV93_RS10045 37e93db221ab526ef362f502a5931bd0 449 PANTHER PTHR11731 179 447 3.1E-122 T 23-04-2016 VV93_RS10045 37e93db221ab526ef362f502a5931bd0 449 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 16 446 4.7E-168 T 23-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 VV93_RS10045 37e93db221ab526ef362f502a5931bd0 449 PANTHER PTHR11731:SF123 1 122 3.1E-122 T 23-04-2016 VV93_RS10900 ae13cdb976667f42406119f2f772fbcc 222 Pfam PF03379 CcmB protein 5 219 4.3E-90 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10900 ae13cdb976667f42406119f2f772fbcc 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 6.0E-92 T 23-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VV93_RS10900 ae13cdb976667f42406119f2f772fbcc 222 PANTHER PTHR30070 2 222 9.1E-72 T 23-04-2016 VV93_RS10900 ae13cdb976667f42406119f2f772fbcc 222 PIRSF PIRSF002764 1 222 1.6E-83 T 23-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VV93_RS10900 ae13cdb976667f42406119f2f772fbcc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 1.8E-69 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10900 ae13cdb976667f42406119f2f772fbcc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 1.8E-69 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10900 ae13cdb976667f42406119f2f772fbcc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 1.8E-69 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10900 ae13cdb976667f42406119f2f772fbcc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 1.8E-69 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10900 ae13cdb976667f42406119f2f772fbcc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 1.8E-69 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10900 ae13cdb976667f42406119f2f772fbcc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 1.8E-69 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10900 ae13cdb976667f42406119f2f772fbcc 222 PANTHER PTHR30070:SF1 2 222 9.1E-72 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS01625 ce531e82a9a89a1296f40152c3bacdf4 352 SUPERFAMILY SSF53756 3 344 2.2E-98 T 23-04-2016 VV93_RS01625 ce531e82a9a89a1296f40152c3bacdf4 352 Gene3D G3DSA:3.40.50.2000 169 344 1.2E-57 T 23-04-2016 VV93_RS01625 ce531e82a9a89a1296f40152c3bacdf4 352 Gene3D G3DSA:3.40.50.2000 3 141 1.4E-54 T 23-04-2016 VV93_RS01625 ce531e82a9a89a1296f40152c3bacdf4 352 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 344 5.3E-149 T 23-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 VV93_RS01625 ce531e82a9a89a1296f40152c3bacdf4 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 71 326 4.0E-72 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 VV93_RS01625 ce531e82a9a89a1296f40152c3bacdf4 352 PANTHER PTHR30160 1 344 8.9E-99 T 23-04-2016 VV93_RS01625 ce531e82a9a89a1296f40152c3bacdf4 352 PANTHER PTHR30160:SF7 1 344 8.9E-99 T 23-04-2016 VV93_RS16230 a078c1bc0f13d6f5c7e945e99a507a8e 467 Pfam PF05170 AsmA family 1 467 6.2E-151 T 23-04-2016 IPR007844 AsmA VV93_RS05285 07fd2e9823ef1d732945acb6e6da62bd 194 Gene3D G3DSA:1.20.1540.10 4 180 4.5E-21 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VV93_RS05285 07fd2e9823ef1d732945acb6e6da62bd 194 PANTHER PTHR22936:SF18 1 181 1.0E-59 T 23-04-2016 VV93_RS05285 07fd2e9823ef1d732945acb6e6da62bd 194 PANTHER PTHR22936 1 181 1.0E-59 T 23-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 VV93_RS05285 07fd2e9823ef1d732945acb6e6da62bd 194 SUPERFAMILY SSF144091 4 180 2.09E-30 T 23-04-2016 VV93_RS05285 07fd2e9823ef1d732945acb6e6da62bd 194 Pfam PF01694 Rhomboid family 42 180 4.1E-14 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VV93_RS05285 07fd2e9823ef1d732945acb6e6da62bd 194 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 32 179 3.5E-50 T 23-04-2016 IPR023826 Rhomboid-like serine protease, proteobacteria VV93_RS02500 dcb60254144882ef2a1d28382c8023a6 155 TIGRFAM TIGR00608 radc: DNA repair protein RadC 26 155 1.5E-46 T 23-04-2016 IPR001405 RadC protein VV93_RS02500 dcb60254144882ef2a1d28382c8023a6 155 PANTHER PTHR30471 17 155 1.0E-74 T 23-04-2016 VV93_RS02500 dcb60254144882ef2a1d28382c8023a6 155 Pfam PF04002 RadC-like JAB domain 37 154 1.8E-45 T 23-04-2016 IPR025657 RadC-like JAB domain VV93_RS02500 dcb60254144882ef2a1d28382c8023a6 155 SUPERFAMILY SSF102712 51 125 7.32E-6 T 23-04-2016 VV93_RS02500 dcb60254144882ef2a1d28382c8023a6 155 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 105 110 - T 23-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site VV93_RS02500 dcb60254144882ef2a1d28382c8023a6 155 Gene3D G3DSA:3.40.140.10 34 155 9.4E-50 T 23-04-2016 VV93_RS02500 dcb60254144882ef2a1d28382c8023a6 155 PANTHER PTHR30471:SF5 17 155 1.0E-74 T 23-04-2016 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 SUPERFAMILY SSF88659 520 622 1.37E-25 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 Pfam PF04545 Sigma-70, region 4 558 611 1.5E-19 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 414 427 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 386 622 1.5E-120 T 23-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 Pfam PF04546 Sigma-70, non-essential region 139 359 3.7E-68 T 23-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 Gene3D G3DSA:1.10.10.10 555 623 4.9E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 623 45.819 T 23-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 Pfam PF04542 Sigma-70 region 2 390 459 1.7E-21 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 583 609 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 SUPERFAMILY SSF88659 463 536 2.25E-20 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 SUPERFAMILY SSF88946 115 457 6.93E-98 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 Gene3D G3DSA:1.10.601.10 112 459 1.3E-132 T 23-04-2016 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 Gene3D G3DSA:1.10.10.10 463 514 1.3E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 Pfam PF03979 Sigma-70 factor, region 1.1 5 80 1.9E-28 T 23-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 PANTHER PTHR30603 337 623 7.3E-248 T 23-04-2016 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 PANTHER PTHR30603 1 152 7.3E-248 T 23-04-2016 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 386 611 1.5E-37 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.5E-12 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 PRINTS PR00046 Major sigma-70 factor signature 438 446 3.3E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 PRINTS PR00046 Major sigma-70 factor signature 583 598 3.3E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 PRINTS PR00046 Major sigma-70 factor signature 598 609 3.3E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 PRINTS PR00046 Major sigma-70 factor signature 414 427 3.3E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 PRINTS PR00046 Major sigma-70 factor signature 562 574 3.3E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 PANTHER PTHR30603:SF0 337 623 7.3E-248 T 23-04-2016 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 PANTHER PTHR30603:SF0 1 152 7.3E-248 T 23-04-2016 VV93_RS02570 e5bdf2ebb31e1c48f15500dba46bcc8e 624 Pfam PF04539 Sigma-70 region 3 469 544 1.3E-28 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS00490 1b865a5cf1f302fc4542751c09856cb8 205 Pfam PF01810 LysE type translocator 15 202 9.0E-37 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VV93_RS00490 1b865a5cf1f302fc4542751c09856cb8 205 PIRSF PIRSF006324 1 205 4.0E-57 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VV93_RS00490 1b865a5cf1f302fc4542751c09856cb8 205 PANTHER PTHR30086:SF14 1 204 5.2E-98 T 23-04-2016 VV93_RS00490 1b865a5cf1f302fc4542751c09856cb8 205 PANTHER PTHR30086 1 204 5.2E-98 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VV93_RS01080 22b1f3ea2b54c416d69d081ab509a51b 120 SUPERFAMILY SSF54523 40 118 2.98E-23 T 23-04-2016 VV93_RS01080 22b1f3ea2b54c416d69d081ab509a51b 120 TIGRFAM TIGR01707 gspI: type II secretion system protein I 9 106 4.5E-36 T 23-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 VV93_RS01080 22b1f3ea2b54c416d69d081ab509a51b 120 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 4.3E-5 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS01080 22b1f3ea2b54c416d69d081ab509a51b 120 Pfam PF13633 Prokaryotic N-terminal methylation site 8 33 3.8E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS01080 22b1f3ea2b54c416d69d081ab509a51b 120 PANTHER PTHR38779:SF2 3 119 3.2E-41 T 23-04-2016 VV93_RS01080 22b1f3ea2b54c416d69d081ab509a51b 120 Gene3D G3DSA:3.30.1300.30 35 120 3.1E-29 T 23-04-2016 VV93_RS01080 22b1f3ea2b54c416d69d081ab509a51b 120 PANTHER PTHR38779 3 119 3.2E-41 T 23-04-2016 VV93_RS01080 22b1f3ea2b54c416d69d081ab509a51b 120 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS01080 22b1f3ea2b54c416d69d081ab509a51b 120 Pfam PF02501 Type II secretion system (T2SS), protein I 43 118 9.9E-22 T 23-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 VV93_RS05660 568a6abad0681678c68ccef730e32c3d 217 Hamap MF_00157 Ribonuclease T [rnt]. 1 217 115.696 T 23-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VV93_RS05660 568a6abad0681678c68ccef730e32c3d 217 Gene3D G3DSA:3.30.420.10 10 210 1.3E-59 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS05660 568a6abad0681678c68ccef730e32c3d 217 PANTHER PTHR30231:SF2 8 215 1.3E-114 T 23-04-2016 VV93_RS05660 568a6abad0681678c68ccef730e32c3d 217 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 8.1E-100 T 23-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VV93_RS05660 568a6abad0681678c68ccef730e32c3d 217 PANTHER PTHR30231 8 215 1.3E-114 T 23-04-2016 VV93_RS05660 568a6abad0681678c68ccef730e32c3d 217 Pfam PF00929 Exonuclease 20 195 4.3E-45 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VV93_RS05660 568a6abad0681678c68ccef730e32c3d 217 SUPERFAMILY SSF53098 10 208 1.17E-56 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS05660 568a6abad0681678c68ccef730e32c3d 217 SMART SM00479 18 204 3.0E-30 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VV93_RS00085 a02572bdd5f233c19755150d850febf6 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.441 T 23-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 VV93_RS00085 a02572bdd5f233c19755150d850febf6 387 PIRSF PIRSF000429 1 387 1.4E-131 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 VV93_RS00085 a02572bdd5f233c19755150d850febf6 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 9.5E-50 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 VV93_RS00085 a02572bdd5f233c19755150d850febf6 387 Gene3D G3DSA:3.40.47.10 184 267 3.2E-64 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS00085 a02572bdd5f233c19755150d850febf6 387 Gene3D G3DSA:3.40.47.10 4 126 3.2E-64 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS00085 a02572bdd5f233c19755150d850febf6 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 1.7E-142 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 VV93_RS00085 a02572bdd5f233c19755150d850febf6 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 8.2E-245 T 23-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 VV93_RS00085 a02572bdd5f233c19755150d850febf6 387 PANTHER PTHR18919 1 387 7.1E-206 T 23-04-2016 VV93_RS00085 a02572bdd5f233c19755150d850febf6 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 VV93_RS00085 a02572bdd5f233c19755150d850febf6 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 4.9E-83 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 VV93_RS00085 a02572bdd5f233c19755150d850febf6 387 PANTHER PTHR18919:SF69 1 387 7.1E-206 T 23-04-2016 VV93_RS00085 a02572bdd5f233c19755150d850febf6 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 VV93_RS00085 a02572bdd5f233c19755150d850febf6 387 Gene3D G3DSA:3.40.47.10 143 183 1.4E-60 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS00085 a02572bdd5f233c19755150d850febf6 387 Gene3D G3DSA:3.40.47.10 268 386 1.4E-60 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS00085 a02572bdd5f233c19755150d850febf6 387 SUPERFAMILY SSF53901 1 259 3.93E-79 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS00085 a02572bdd5f233c19755150d850febf6 387 SUPERFAMILY SSF53901 263 386 1.12E-44 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS00085 a02572bdd5f233c19755150d850febf6 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 VV93_RS14440 aa13f5459e39b652c32fbdce64cb79bd 302 SUPERFAMILY SSF160240 210 288 3.4E-24 T 23-04-2016 VV93_RS14440 aa13f5459e39b652c32fbdce64cb79bd 302 PANTHER PTHR11562 4 301 3.6E-114 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VV93_RS14440 aa13f5459e39b652c32fbdce64cb79bd 302 Gene3D G3DSA:1.20.1510.10 11 206 1.3E-42 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain VV93_RS14440 aa13f5459e39b652c32fbdce64cb79bd 302 SUPERFAMILY SSF161111 8 207 2.22E-51 T 23-04-2016 VV93_RS14440 aa13f5459e39b652c32fbdce64cb79bd 302 PANTHER PTHR11562:SF55 4 301 3.6E-114 T 23-04-2016 VV93_RS14440 aa13f5459e39b652c32fbdce64cb79bd 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 287 2.0E-70 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VV93_RS14440 aa13f5459e39b652c32fbdce64cb79bd 302 Pfam PF01545 Cation efflux family 15 206 4.7E-44 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VV93_RS14440 aa13f5459e39b652c32fbdce64cb79bd 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 4.6E-25 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain VV93_RS14440 aa13f5459e39b652c32fbdce64cb79bd 302 Gene3D G3DSA:3.30.70.1350 207 288 1.1E-29 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain VV93_RS06070 621d9b4f55502d17c0590b19460613fd 359 PANTHER PTHR23264 1 357 2.4E-154 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein VV93_RS06070 621d9b4f55502d17c0590b19460613fd 359 PANTHER PTHR23264:SF19 1 357 2.4E-154 T 23-04-2016 VV93_RS06070 621d9b4f55502d17c0590b19460613fd 359 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 1.3E-97 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein VV93_RS06070 621d9b4f55502d17c0590b19460613fd 359 SUPERFAMILY SSF52540 89 321 5.61E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06070 621d9b4f55502d17c0590b19460613fd 359 Gene3D G3DSA:3.40.50.300 88 335 9.5E-103 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06070 621d9b4f55502d17c0590b19460613fd 359 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 23-04-2016 IPR000808 Mrp, conserved site GO:0005524 VV93_RS06070 621d9b4f55502d17c0590b19460613fd 359 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 334 35.781 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein VV93_RS08845 889787ba6164ab27ec7d35afc0ad6111 791 SUPERFAMILY SSF82866 163 382 4.32E-32 T 23-04-2016 VV93_RS08845 889787ba6164ab27ec7d35afc0ad6111 791 Pfam PF03176 MMPL family 591 765 1.3E-13 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 VV93_RS08845 889787ba6164ab27ec7d35afc0ad6111 791 Pfam PF03176 MMPL family 60 385 2.3E-20 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 VV93_RS08845 889787ba6164ab27ec7d35afc0ad6111 791 Gene3D G3DSA:1.20.1640.10 590 769 1.5E-29 T 23-04-2016 VV93_RS08845 889787ba6164ab27ec7d35afc0ad6111 791 Gene3D G3DSA:1.20.1640.10 184 389 2.3E-34 T 23-04-2016 VV93_RS08845 889787ba6164ab27ec7d35afc0ad6111 791 PANTHER PTHR33406 120 768 5.0E-60 T 23-04-2016 VV93_RS08845 889787ba6164ab27ec7d35afc0ad6111 791 PANTHER PTHR33406 4 103 5.0E-60 T 23-04-2016 VV93_RS08845 889787ba6164ab27ec7d35afc0ad6111 791 PANTHER PTHR33406:SF2 120 768 5.0E-60 T 23-04-2016 VV93_RS08845 889787ba6164ab27ec7d35afc0ad6111 791 PANTHER PTHR33406:SF2 4 103 5.0E-60 T 23-04-2016 VV93_RS08845 889787ba6164ab27ec7d35afc0ad6111 791 SUPERFAMILY SSF82866 577 768 2.09E-32 T 23-04-2016 VV93_RS14445 72244da8503a65b921516cbfc73d6544 171 Pfam PF07813 LTXXQ motif family protein 40 150 1.2E-23 T 23-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 VV93_RS14445 72244da8503a65b921516cbfc73d6544 171 PANTHER PTHR38102 2 171 1.8E-34 T 23-04-2016 VV93_RS14445 72244da8503a65b921516cbfc73d6544 171 PIRSF PIRSF034445 1 160 6.1E-20 T 23-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 VV93_RS14445 72244da8503a65b921516cbfc73d6544 171 PANTHER PTHR38102:SF1 2 171 1.8E-34 T 23-04-2016 VV93_RS11585 4caed3320098a5dd92b54b9a9572b28c 846 SMART SM00495 277 326 0.02 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS11585 4caed3320098a5dd92b54b9a9572b28c 846 SMART SM00495 28 74 1.1E-10 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS11585 4caed3320098a5dd92b54b9a9572b28c 846 ProSitePatterns PS01095 Chitinases family 18 active site. 637 645 - T 23-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 VV93_RS11585 4caed3320098a5dd92b54b9a9572b28c 846 Gene3D G3DSA:2.10.10.20 24 73 9.5E-12 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS11585 4caed3320098a5dd92b54b9a9572b28c 846 PANTHER PTHR11177 494 834 1.3E-56 T 23-04-2016 VV93_RS11585 4caed3320098a5dd92b54b9a9572b28c 846 SUPERFAMILY SSF51055 19 78 8.63E-13 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS11585 4caed3320098a5dd92b54b9a9572b28c 846 SUPERFAMILY SSF51445 522 833 6.88E-49 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily VV93_RS11585 4caed3320098a5dd92b54b9a9572b28c 846 Pfam PF02839 Carbohydrate binding domain 29 68 4.4E-9 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS11585 4caed3320098a5dd92b54b9a9572b28c 846 Gene3D G3DSA:3.20.20.80 522 834 6.1E-57 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VV93_RS11585 4caed3320098a5dd92b54b9a9572b28c 846 PANTHER PTHR11177:SF195 494 834 1.3E-56 T 23-04-2016 VV93_RS11585 4caed3320098a5dd92b54b9a9572b28c 846 SMART SM00636 523 825 1.7E-4 T 23-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 VV93_RS11585 4caed3320098a5dd92b54b9a9572b28c 846 Pfam PF00704 Glycosyl hydrolases family 18 525 825 1.1E-25 T 23-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 2.7E-63 T 23-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 PANTHER PTHR11451 7 247 6.1E-241 T 23-04-2016 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 PANTHER PTHR11451 267 555 6.1E-241 T 23-04-2016 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 5.5E-296 T 23-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 Gene3D G3DSA:2.40.240.10 348 461 2.6E-49 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 2.9E-128 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 Gene3D G3DSA:2.40.240.10 462 548 1.9E-34 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 3.5E-10 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 3.5E-10 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 3.5E-10 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 3.5E-10 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 Gene3D G3DSA:3.40.50.620 212 262 1.6E-44 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 Gene3D G3DSA:3.40.50.620 28 96 1.6E-44 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 SUPERFAMILY SSF50715 340 548 1.67E-78 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.217 T 23-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 Gene3D G3DSA:3.90.800.10 101 209 3.7E-48 T 23-04-2016 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 Gene3D G3DSA:1.10.1160.10 263 338 3.1E-39 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 PANTHER PTHR11451:SF29 7 247 6.1E-241 T 23-04-2016 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 PANTHER PTHR11451:SF29 267 555 6.1E-241 T 23-04-2016 VV93_RS04810 65adfd9e5d87aa1559d0ad143fe6186d 556 SUPERFAMILY SSF52374 11 337 1.63E-103 T 23-04-2016 VV93_RS10415 3a2d9a5891306cbb6cb84aba006776d4 644 PANTHER PTHR30267 1 644 1.5E-298 T 23-04-2016 VV93_RS10415 3a2d9a5891306cbb6cb84aba006776d4 644 PANTHER PTHR30267:SF2 1 644 1.5E-298 T 23-04-2016 VV93_RS10415 3a2d9a5891306cbb6cb84aba006776d4 644 Pfam PF08298 PrkA AAA domain 19 380 4.1E-175 T 23-04-2016 IPR013153 PrkA AAA domain VV93_RS10415 3a2d9a5891306cbb6cb84aba006776d4 644 SUPERFAMILY SSF52540 236 368 6.12E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10415 3a2d9a5891306cbb6cb84aba006776d4 644 SUPERFAMILY SSF52540 73 156 6.12E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10415 3a2d9a5891306cbb6cb84aba006776d4 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 2.6E-74 T 23-04-2016 IPR010650 PrkA C-terminal domain VV93_RS10415 3a2d9a5891306cbb6cb84aba006776d4 644 Gene3D G3DSA:3.40.50.300 243 329 5.0E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10415 3a2d9a5891306cbb6cb84aba006776d4 644 Gene3D G3DSA:3.40.50.300 73 170 5.0E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10415 3a2d9a5891306cbb6cb84aba006776d4 644 SMART SM00763 19 380 8.1E-217 T 23-04-2016 IPR013153 PrkA AAA domain VV93_RS10415 3a2d9a5891306cbb6cb84aba006776d4 644 PIRSF PIRSF000549 1 644 7.3E-288 T 23-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 VV93_RS06755 e604273dcce33fd7e117e86d1af9e215 553 PIRSF PIRSF000076 1 553 1.1E-240 T 23-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VV93_RS06755 e604273dcce33fd7e117e86d1af9e215 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.133 T 23-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VV93_RS06755 e604273dcce33fd7e117e86d1af9e215 553 Gene3D G3DSA:1.20.1270.20 162 235 3.1E-23 T 23-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VV93_RS06755 e604273dcce33fd7e117e86d1af9e215 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 547 2.7E-162 T 23-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 VV93_RS06755 e604273dcce33fd7e117e86d1af9e215 553 Gene3D G3DSA:3.40.50.2030 383 550 7.0E-70 T 23-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VV93_RS06755 e604273dcce33fd7e117e86d1af9e215 553 PANTHER PTHR30109 1 551 2.4E-280 T 23-04-2016 VV93_RS06755 e604273dcce33fd7e117e86d1af9e215 553 Gene3D G3DSA:3.40.50.2030 237 382 4.5E-67 T 23-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VV93_RS06755 e604273dcce33fd7e117e86d1af9e215 553 Gene3D G3DSA:1.20.1270.20 141 161 5.1E-36 T 23-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VV93_RS06755 e604273dcce33fd7e117e86d1af9e215 553 Gene3D G3DSA:1.20.1270.20 1 109 5.1E-36 T 23-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VV93_RS06755 e604273dcce33fd7e117e86d1af9e215 553 PANTHER PTHR30109:SF0 1 551 2.4E-280 T 23-04-2016 VV93_RS06755 e604273dcce33fd7e117e86d1af9e215 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 3.3E-224 T 23-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VV93_RS06755 e604273dcce33fd7e117e86d1af9e215 553 SUPERFAMILY SSF56821 1 551 1.83E-192 T 23-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 VV93_RS11020 bb09505b8b0df50fbb584c5c5edbe5fb 440 SMART SM00382 158 342 5.4E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS11020 bb09505b8b0df50fbb584c5c5edbe5fb 440 PANTHER PTHR15184 23 428 6.4E-227 T 23-04-2016 VV93_RS11020 bb09505b8b0df50fbb584c5c5edbe5fb 440 PANTHER PTHR15184:SF9 23 428 6.4E-227 T 23-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS11020 bb09505b8b0df50fbb584c5c5edbe5fb 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 22 437 6.2E-174 T 23-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS11020 bb09505b8b0df50fbb584c5c5edbe5fb 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 1.3E-73 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS11020 bb09505b8b0df50fbb584c5c5edbe5fb 440 Gene3D G3DSA:3.40.50.300 94 359 1.8E-93 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11020 bb09505b8b0df50fbb584c5c5edbe5fb 440 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 6.8E-194 T 23-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS11020 bb09505b8b0df50fbb584c5c5edbe5fb 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS11020 bb09505b8b0df50fbb584c5c5edbe5fb 440 SUPERFAMILY SSF52540 94 362 1.97E-96 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02785 90d0bbb10b4f04564c4576d4c99cf46e 316 Gene3D G3DSA:3.40.50.150 7 110 1.6E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS02785 90d0bbb10b4f04564c4576d4c99cf46e 316 Gene3D G3DSA:3.40.50.150 220 316 1.6E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS02785 90d0bbb10b4f04564c4576d4c99cf46e 316 PIRSF PIRSF004486 1 316 4.8E-101 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS02785 90d0bbb10b4f04564c4576d4c99cf46e 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 315 1.4E-119 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS02785 90d0bbb10b4f04564c4576d4c99cf46e 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 37.968 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS02785 90d0bbb10b4f04564c4576d4c99cf46e 316 PANTHER PTHR11265:SF0 1 316 1.1E-144 T 23-04-2016 VV93_RS02785 90d0bbb10b4f04564c4576d4c99cf46e 316 Gene3D G3DSA:1.10.150.170 112 219 3.4E-35 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS02785 90d0bbb10b4f04564c4576d4c99cf46e 316 SUPERFAMILY SSF53335 7 113 2.15E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS02785 90d0bbb10b4f04564c4576d4c99cf46e 316 SUPERFAMILY SSF53335 217 316 2.15E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS02785 90d0bbb10b4f04564c4576d4c99cf46e 316 SUPERFAMILY SSF81799 113 216 7.98E-31 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS02785 90d0bbb10b4f04564c4576d4c99cf46e 316 Pfam PF01795 MraW methylase family 5 315 4.6E-111 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS02785 90d0bbb10b4f04564c4576d4c99cf46e 316 PANTHER PTHR11265 1 316 1.1E-144 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS01815 bd3ad6b1483c2618e66f682baeac1342 274 Gene3D G3DSA:2.30.30.30 119 195 6.8E-33 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 VV93_RS01815 bd3ad6b1483c2618e66f682baeac1342 274 Gene3D G3DSA:2.40.50.140 1 114 6.1E-50 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS01815 bd3ad6b1483c2618e66f682baeac1342 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 7.5E-34 T 23-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01815 bd3ad6b1483c2618e66f682baeac1342 274 SMART SM01382 124 252 1.7E-91 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VV93_RS01815 bd3ad6b1483c2618e66f682baeac1342 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 23-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 VV93_RS01815 bd3ad6b1483c2618e66f682baeac1342 274 PIRSF PIRSF002158 13 274 8.4E-101 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01815 bd3ad6b1483c2618e66f682baeac1342 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.889 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VV93_RS01815 bd3ad6b1483c2618e66f682baeac1342 274 SMART SM01383 42 118 1.0E-46 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01815 bd3ad6b1483c2618e66f682baeac1342 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 5.3E-130 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VV93_RS01815 bd3ad6b1483c2618e66f682baeac1342 274 PANTHER PTHR13691 1 274 7.3E-148 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01815 bd3ad6b1483c2618e66f682baeac1342 274 SUPERFAMILY SSF50249 2 125 2.64E-49 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS01815 bd3ad6b1483c2618e66f682baeac1342 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 5.3E-56 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VV93_RS01815 bd3ad6b1483c2618e66f682baeac1342 274 SUPERFAMILY SSF50104 127 272 4.03E-61 T 23-04-2016 IPR008991 Translation protein SH3-like domain VV93_RS01815 bd3ad6b1483c2618e66f682baeac1342 274 Gene3D G3DSA:4.10.950.10 196 273 1.2E-35 T 23-04-2016 IPR014726 Ribosomal protein L2, domain 3 VV93_RS06260 854b4319ba2245be50916f078978f392 88 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 86 19.208 T 23-04-2016 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 VV93_RS06260 854b4319ba2245be50916f078978f392 88 Pfam PF06305 Protein of unknown function (DUF1049) 22 85 4.5E-18 T 23-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 VV93_RS02120 da4af75c0d4f5a2533f6810c14479924 451 SUPERFAMILY SSF54631 138 278 1.15E-25 T 23-04-2016 VV93_RS02120 da4af75c0d4f5a2533f6810c14479924 451 SUPERFAMILY SSF158791 12 136 1.18E-29 T 23-04-2016 VV93_RS02120 da4af75c0d4f5a2533f6810c14479924 451 SMART SM00924 36 139 2.8E-36 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain VV93_RS02120 da4af75c0d4f5a2533f6810c14479924 451 Pfam PF01769 Divalent cation transporter 323 445 4.0E-22 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VV93_RS02120 da4af75c0d4f5a2533f6810c14479924 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 451 8.4E-88 T 23-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 VV93_RS02120 da4af75c0d4f5a2533f6810c14479924 451 PANTHER PTHR11911 1 422 2.2E-97 T 23-04-2016 VV93_RS02120 da4af75c0d4f5a2533f6810c14479924 451 Gene3D G3DSA:1.25.60.10 9 131 8.6E-29 T 23-04-2016 VV93_RS02120 da4af75c0d4f5a2533f6810c14479924 451 Pfam PF03448 MgtE intracellular N domain 36 137 2.9E-26 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain VV93_RS02120 da4af75c0d4f5a2533f6810c14479924 451 Pfam PF00571 CBS domain 217 257 9.0E-4 T 23-04-2016 IPR000644 CBS domain VV93_RS02120 da4af75c0d4f5a2533f6810c14479924 451 Pfam PF00571 CBS domain 140 189 0.0014 T 23-04-2016 IPR000644 CBS domain VV93_RS02120 da4af75c0d4f5a2533f6810c14479924 451 Gene3D G3DSA:1.10.357.20 280 451 4.7E-47 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VV93_RS02120 da4af75c0d4f5a2533f6810c14479924 451 Gene3D G3DSA:3.10.580.10 132 262 1.3E-14 T 23-04-2016 VV93_RS02120 da4af75c0d4f5a2533f6810c14479924 451 SUPERFAMILY SSF161093 280 450 2.48E-43 T 23-04-2016 VV93_RS02120 da4af75c0d4f5a2533f6810c14479924 451 PANTHER PTHR11911:SF99 1 422 2.2E-97 T 23-04-2016 VV93_RS02120 da4af75c0d4f5a2533f6810c14479924 451 SMART SM00116 146 199 73.0 T 23-04-2016 IPR000644 CBS domain VV93_RS02120 da4af75c0d4f5a2533f6810c14479924 451 SMART SM00116 212 258 0.029 T 23-04-2016 IPR000644 CBS domain VV93_RS06340 001e2f96003a1cdb9bbe13c1c03a9c3f 374 SUPERFAMILY SSF52283 305 360 8.5E-67 T 23-04-2016 VV93_RS06340 001e2f96003a1cdb9bbe13c1c03a9c3f 374 SUPERFAMILY SSF52283 1 137 8.5E-67 T 23-04-2016 VV93_RS06340 001e2f96003a1cdb9bbe13c1c03a9c3f 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 3.9E-155 T 23-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 VV93_RS06340 001e2f96003a1cdb9bbe13c1c03a9c3f 374 Gene3D G3DSA:3.50.50.60 179 203 4.6E-8 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS06340 001e2f96003a1cdb9bbe13c1c03a9c3f 374 Gene3D G3DSA:3.40.50.1770 204 358 2.1E-29 T 23-04-2016 VV93_RS06340 001e2f96003a1cdb9bbe13c1c03a9c3f 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 4.2E-83 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VV93_RS06340 001e2f96003a1cdb9bbe13c1c03a9c3f 374 PIRSF PIRSF000183 1 371 6.9E-157 T 23-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 VV93_RS06340 001e2f96003a1cdb9bbe13c1c03a9c3f 374 SMART SM01003 4 137 7.5E-79 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VV93_RS06340 001e2f96003a1cdb9bbe13c1c03a9c3f 374 SUPERFAMILY SSF51735 137 303 1.27E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS06340 001e2f96003a1cdb9bbe13c1c03a9c3f 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 7.7E-46 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VV93_RS06340 001e2f96003a1cdb9bbe13c1c03a9c3f 374 Gene3D G3DSA:3.40.50.1770 3 178 7.3E-63 T 23-04-2016 VV93_RS06340 001e2f96003a1cdb9bbe13c1c03a9c3f 374 PANTHER PTHR10160 1 371 2.1E-215 T 23-04-2016 VV93_RS06340 001e2f96003a1cdb9bbe13c1c03a9c3f 374 SMART SM01002 149 297 9.6E-89 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VV93_RS02175 7edc1c76c003893d7f2785087d612f3c 321 PANTHER PTHR10846 5 317 2.1E-81 T 23-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 VV93_RS02175 7edc1c76c003893d7f2785087d612f3c 321 Pfam PF01699 Sodium/calcium exchanger protein 5 143 2.2E-27 T 23-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 VV93_RS02175 7edc1c76c003893d7f2785087d612f3c 321 Pfam PF01699 Sodium/calcium exchanger protein 175 316 4.6E-29 T 23-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 VV93_RS02175 7edc1c76c003893d7f2785087d612f3c 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 1.2E-83 T 23-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 VV93_RS10365 6687ca2c0b35af4e193c103f086c4d9e 256 Gene3D G3DSA:3.40.50.300 6 253 3.8E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10365 6687ca2c0b35af4e193c103f086c4d9e 256 Pfam PF00005 ABC transporter 22 181 9.1E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS10365 6687ca2c0b35af4e193c103f086c4d9e 256 SMART SM00382 31 229 1.7E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS10365 6687ca2c0b35af4e193c103f086c4d9e 256 PIRSF PIRSF039085 3 256 3.1E-118 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VV93_RS10365 6687ca2c0b35af4e193c103f086c4d9e 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS10365 6687ca2c0b35af4e193c103f086c4d9e 256 PANTHER PTHR24220 8 255 1.0E-162 T 23-04-2016 VV93_RS10365 6687ca2c0b35af4e193c103f086c4d9e 256 SUPERFAMILY SSF52540 7 251 9.22E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10365 6687ca2c0b35af4e193c103f086c4d9e 256 PANTHER PTHR24220:SF472 8 255 1.0E-162 T 23-04-2016 VV93_RS10710 54bd9c6cd85325791c253b8c2e82d26a 730 PANTHER PTHR11669:SF0 1 457 9.3E-178 T 23-04-2016 VV93_RS10710 54bd9c6cd85325791c253b8c2e82d26a 730 Gene3D G3DSA:1.20.272.10 243 360 9.8E-45 T 23-04-2016 VV93_RS10710 54bd9c6cd85325791c253b8c2e82d26a 730 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 589 727 7.2E-50 T 23-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS10710 54bd9c6cd85325791c253b8c2e82d26a 730 SUPERFAMILY SSF48019 243 362 5.7E-33 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VV93_RS10710 54bd9c6cd85325791c253b8c2e82d26a 730 SUPERFAMILY SSF52540 34 222 2.0E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10710 54bd9c6cd85325791c253b8c2e82d26a 730 Gene3D G3DSA:1.10.8.60 167 242 2.1E-31 T 23-04-2016 VV93_RS10710 54bd9c6cd85325791c253b8c2e82d26a 730 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 360 3.7E-31 T 23-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 VV93_RS10710 54bd9c6cd85325791c253b8c2e82d26a 730 Pfam PF13177 DNA polymerase III, delta subunit 20 178 5.7E-44 T 23-04-2016 VV93_RS10710 54bd9c6cd85325791c253b8c2e82d26a 730 SMART SM00382 37 179 2.1E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS10710 54bd9c6cd85325791c253b8c2e82d26a 730 Gene3D G3DSA:3.40.50.300 15 166 2.0E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10710 54bd9c6cd85325791c253b8c2e82d26a 730 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.8E-132 T 23-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 VV93_RS10710 54bd9c6cd85325791c253b8c2e82d26a 730 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 515 587 6.1E-21 T 23-04-2016 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS10710 54bd9c6cd85325791c253b8c2e82d26a 730 PANTHER PTHR11669 1 457 9.3E-178 T 23-04-2016 VV93_RS06950 9af49552851ba75be8d779f8953c33fa 195 Gene3D G3DSA:1.10.150.20 114 193 7.4E-28 T 23-04-2016 VV93_RS06950 9af49552851ba75be8d779f8953c33fa 195 SUPERFAMILY SSF159894 3 102 4.97E-29 T 23-04-2016 VV93_RS06950 9af49552851ba75be8d779f8953c33fa 195 Gene3D G3DSA:3.30.1460.30 2 102 4.8E-30 T 23-04-2016 IPR007076 TfoX, N-terminal VV93_RS06950 9af49552851ba75be8d779f8953c33fa 195 PIRSF PIRSF028788 4 194 6.4E-40 T 23-04-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type VV93_RS06950 9af49552851ba75be8d779f8953c33fa 195 Pfam PF04993 TfoX N-terminal domain 11 101 5.1E-26 T 23-04-2016 IPR007076 TfoX, N-terminal VV93_RS06950 9af49552851ba75be8d779f8953c33fa 195 PANTHER PTHR36121:SF1 1 192 1.2E-45 T 23-04-2016 VV93_RS06950 9af49552851ba75be8d779f8953c33fa 195 Pfam PF04994 TfoX C-terminal domain 114 193 2.4E-28 T 23-04-2016 IPR007077 TfoX, C-terminal VV93_RS06950 9af49552851ba75be8d779f8953c33fa 195 PANTHER PTHR36121 1 192 1.2E-45 T 23-04-2016 VV93_RS00460 448586570f13e465fcb2bd4f5eab2394 829 Pfam PF10442 FIST C domain 216 341 5.4E-12 T 23-04-2016 IPR019494 FIST, C-domain VV93_RS00460 448586570f13e465fcb2bd4f5eab2394 829 Pfam PF00563 EAL domain 599 825 2.0E-58 T 23-04-2016 IPR001633 EAL domain VV93_RS00460 448586570f13e465fcb2bd4f5eab2394 829 PANTHER PTHR33121:SF10 581 828 8.6E-46 T 23-04-2016 VV93_RS00460 448586570f13e465fcb2bd4f5eab2394 829 SMART SM00267 403 578 4.2E-4 T 23-04-2016 IPR000160 GGDEF domain VV93_RS00460 448586570f13e465fcb2bd4f5eab2394 829 SUPERFAMILY SSF141868 599 825 1.7E-58 T 23-04-2016 IPR001633 EAL domain VV93_RS00460 448586570f13e465fcb2bd4f5eab2394 829 SUPERFAMILY SSF55073 420 562 6.75E-8 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS00460 448586570f13e465fcb2bd4f5eab2394 829 SMART SM00052 591 829 2.2E-32 T 23-04-2016 IPR001633 EAL domain VV93_RS00460 448586570f13e465fcb2bd4f5eab2394 829 Gene3D G3DSA:3.20.20.450 599 826 1.8E-56 T 23-04-2016 IPR001633 EAL domain VV93_RS00460 448586570f13e465fcb2bd4f5eab2394 829 SMART SM01204 216 342 1.9E-16 T 23-04-2016 IPR019494 FIST, C-domain VV93_RS00460 448586570f13e465fcb2bd4f5eab2394 829 Pfam PF08495 FIST N domain 30 214 1.3E-19 T 23-04-2016 IPR013702 FIST domain, N-terminal VV93_RS00460 448586570f13e465fcb2bd4f5eab2394 829 PANTHER PTHR33121 581 828 8.6E-46 T 23-04-2016 VV93_RS00460 448586570f13e465fcb2bd4f5eab2394 829 Gene3D G3DSA:3.30.70.270 416 563 1.3E-8 T 23-04-2016 VV93_RS00460 448586570f13e465fcb2bd4f5eab2394 829 Pfam PF00990 Diguanylate cyclase, GGDEF domain 416 476 9.1E-7 T 23-04-2016 IPR000160 GGDEF domain VV93_RS00460 448586570f13e465fcb2bd4f5eab2394 829 SMART SM00897 27 215 2.3E-30 T 23-04-2016 IPR013702 FIST domain, N-terminal VV93_RS07385 1433c5e188cb16f8a00850c1ef2ec46b 544 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 232 243 - T 23-04-2016 IPR033116 Serine proteases, trypsin family, serine active site VV93_RS07385 1433c5e188cb16f8a00850c1ef2ec46b 544 Pfam PF00089 Trypsin 55 279 4.0E-51 T 23-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VV93_RS07385 1433c5e188cb16f8a00850c1ef2ec46b 544 SMART SM00020 54 281 3.5E-66 T 23-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VV93_RS07385 1433c5e188cb16f8a00850c1ef2ec46b 544 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 93 98 - T 23-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VV93_RS07385 1433c5e188cb16f8a00850c1ef2ec46b 544 Pfam PF02839 Carbohydrate binding domain 412 453 1.4E-10 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS07385 1433c5e188cb16f8a00850c1ef2ec46b 544 Gene3D G3DSA:2.60.40.360 304 384 5.6E-6 T 23-04-2016 IPR008962 PapD-like VV93_RS07385 1433c5e188cb16f8a00850c1ef2ec46b 544 SUPERFAMILY SSF50494 22 286 4.66E-65 T 23-04-2016 IPR009003 Peptidase S1, PA clan VV93_RS07385 1433c5e188cb16f8a00850c1ef2ec46b 544 Gene3D G3DSA:2.40.10.10 182 275 4.4E-33 T 23-04-2016 VV93_RS07385 1433c5e188cb16f8a00850c1ef2ec46b 544 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 139 153 9.4E-13 T 23-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV93_RS07385 1433c5e188cb16f8a00850c1ef2ec46b 544 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 231 243 9.4E-13 T 23-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV93_RS07385 1433c5e188cb16f8a00850c1ef2ec46b 544 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 83 98 9.4E-13 T 23-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV93_RS07385 1433c5e188cb16f8a00850c1ef2ec46b 544 SMART SM00495 489 540 7.6E-5 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS07385 1433c5e188cb16f8a00850c1ef2ec46b 544 SMART SM00495 411 456 1.4E-10 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS07385 1433c5e188cb16f8a00850c1ef2ec46b 544 PANTHER PTHR24276 20 287 2.7E-74 T 23-04-2016 VV93_RS07385 1433c5e188cb16f8a00850c1ef2ec46b 544 Gene3D G3DSA:2.40.10.10 137 181 8.1E-12 T 23-04-2016 VV93_RS07385 1433c5e188cb16f8a00850c1ef2ec46b 544 SUPERFAMILY SSF51055 407 457 1.83E-13 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS07385 1433c5e188cb16f8a00850c1ef2ec46b 544 Gene3D G3DSA:2.40.10.10 51 136 1.1E-23 T 23-04-2016 VV93_RS07385 1433c5e188cb16f8a00850c1ef2ec46b 544 Gene3D G3DSA:2.10.10.20 409 456 5.7E-17 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS08645 8f820d688e59b378b9947ab83c7af9a1 255 Gene3D G3DSA:3.30.70.270 116 196 8.6E-9 T 23-04-2016 VV93_RS08645 8f820d688e59b378b9947ab83c7af9a1 255 Gene3D G3DSA:3.30.70.270 63 77 8.6E-9 T 23-04-2016 VV93_RS08645 8f820d688e59b378b9947ab83c7af9a1 255 SUPERFAMILY SSF56672 116 197 8.9E-10 T 23-04-2016 VV93_RS08645 8f820d688e59b378b9947ab83c7af9a1 255 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 28 199 1.4E-19 T 23-04-2016 IPR000477 Reverse transcriptase domain VV93_RS07805 a0ac20435d256fb69df8feb4d3bcaf8d 707 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.545 T 23-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS07805 a0ac20435d256fb69df8feb4d3bcaf8d 707 PANTHER PTHR18895:SF62 405 682 1.4E-123 T 23-04-2016 VV93_RS07805 a0ac20435d256fb69df8feb4d3bcaf8d 707 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 1.4E-61 T 23-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS07805 a0ac20435d256fb69df8feb4d3bcaf8d 707 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV93_RS07805 a0ac20435d256fb69df8feb4d3bcaf8d 707 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 434 667 2.0E-26 T 23-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VV93_RS07805 a0ac20435d256fb69df8feb4d3bcaf8d 707 Pfam PF02926 THUMP domain 32 153 8.1E-12 T 23-04-2016 IPR004114 THUMP domain GO:0003723 VV93_RS07805 a0ac20435d256fb69df8feb4d3bcaf8d 707 SMART SM00981 56 154 3.3E-20 T 23-04-2016 IPR004114 THUMP domain GO:0003723 VV93_RS07805 a0ac20435d256fb69df8feb4d3bcaf8d 707 SUPERFAMILY SSF53335 399 706 6.2E-70 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS07805 a0ac20435d256fb69df8feb4d3bcaf8d 707 PIRSF PIRSF037618 1 707 9.1E-298 T 23-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS07805 a0ac20435d256fb69df8feb4d3bcaf8d 707 PANTHER PTHR18895 405 682 1.4E-123 T 23-04-2016 VV93_RS07805 a0ac20435d256fb69df8feb4d3bcaf8d 707 Gene3D G3DSA:3.40.50.150 255 335 2.3E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS07805 a0ac20435d256fb69df8feb4d3bcaf8d 707 Gene3D G3DSA:3.40.50.150 153 214 2.3E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS07805 a0ac20435d256fb69df8feb4d3bcaf8d 707 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 23-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS07805 a0ac20435d256fb69df8feb4d3bcaf8d 707 Gene3D G3DSA:3.40.50.150 436 706 3.1E-76 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS07805 a0ac20435d256fb69df8feb4d3bcaf8d 707 SUPERFAMILY SSF53335 258 371 3.54E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS07805 a0ac20435d256fb69df8feb4d3bcaf8d 707 SUPERFAMILY SSF53335 139 217 3.54E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00925 d57bda5eacdee73a0d468b94d48edfad 249 PANTHER PTHR30371:SF0 5 249 6.3E-110 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VV93_RS00925 d57bda5eacdee73a0d468b94d48edfad 249 ProSitePatterns PS01218 TatC family signature. 155 174 - T 23-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site VV93_RS00925 d57bda5eacdee73a0d468b94d48edfad 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.2E-51 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VV93_RS00925 d57bda5eacdee73a0d468b94d48edfad 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.2E-51 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VV93_RS00925 d57bda5eacdee73a0d468b94d48edfad 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.2E-51 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VV93_RS00925 d57bda5eacdee73a0d468b94d48edfad 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.2E-51 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VV93_RS00925 d57bda5eacdee73a0d468b94d48edfad 249 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 241 18.177 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VV93_RS00925 d57bda5eacdee73a0d468b94d48edfad 249 PANTHER PTHR30371 5 249 6.3E-110 T 23-04-2016 VV93_RS00925 d57bda5eacdee73a0d468b94d48edfad 249 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 8.7E-66 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VV93_RS00925 d57bda5eacdee73a0d468b94d48edfad 249 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 1.4E-74 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VV93_RS03425 960032bdd351cb09aacce7be23802d30 730 SUPERFAMILY SSF69322 68 372 2.48E-9 T 23-04-2016 VV93_RS03425 960032bdd351cb09aacce7be23802d30 730 SUPERFAMILY SSF161098 504 716 1.44E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS03425 960032bdd351cb09aacce7be23802d30 730 Gene3D G3DSA:2.130.10.10 214 371 3.8E-4 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VV93_RS03425 960032bdd351cb09aacce7be23802d30 730 Gene3D G3DSA:2.130.10.10 68 106 3.8E-4 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VV93_RS03425 960032bdd351cb09aacce7be23802d30 730 Gene3D G3DSA:1.10.3720.10 412 494 7.7E-49 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS03425 960032bdd351cb09aacce7be23802d30 730 Gene3D G3DSA:1.10.3720.10 566 728 7.7E-49 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS03425 960032bdd351cb09aacce7be23802d30 730 Gene3D G3DSA:1.10.3720.10 34 54 7.7E-49 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS03425 960032bdd351cb09aacce7be23802d30 730 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 536 724 9.0E-13 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS03425 960032bdd351cb09aacce7be23802d30 730 PANTHER PTHR30425:SF3 561 730 3.4E-150 T 23-04-2016 VV93_RS03425 960032bdd351cb09aacce7be23802d30 730 PANTHER PTHR30425:SF3 382 496 3.4E-150 T 23-04-2016 VV93_RS03425 960032bdd351cb09aacce7be23802d30 730 SUPERFAMILY SSF161098 408 516 2.45E-7 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS03425 960032bdd351cb09aacce7be23802d30 730 PANTHER PTHR30425 561 730 3.4E-150 T 23-04-2016 VV93_RS03425 960032bdd351cb09aacce7be23802d30 730 PANTHER PTHR30425 382 496 3.4E-150 T 23-04-2016 VV93_RS19445 3d113f14d1a28577eb00b68a28baff5f 228 SUPERFAMILY SSF81660 2 69 5.23E-9 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 VV93_RS19445 3d113f14d1a28577eb00b68a28baff5f 228 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 82 92 6.2E-19 T 23-04-2016 VV93_RS19445 3d113f14d1a28577eb00b68a28baff5f 228 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 60 71 6.2E-19 T 23-04-2016 VV93_RS19445 3d113f14d1a28577eb00b68a28baff5f 228 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 135 154 6.2E-19 T 23-04-2016 VV93_RS19445 3d113f14d1a28577eb00b68a28baff5f 228 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 158 170 6.2E-19 T 23-04-2016 VV93_RS19445 3d113f14d1a28577eb00b68a28baff5f 228 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 107 123 1.3E-7 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 VV93_RS19445 3d113f14d1a28577eb00b68a28baff5f 228 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 135 151 1.3E-7 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 VV93_RS19445 3d113f14d1a28577eb00b68a28baff5f 228 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 166 191 1.3E-7 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 VV93_RS19445 3d113f14d1a28577eb00b68a28baff5f 228 Gene3D G3DSA:3.40.1110.10 13 62 6.2E-5 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 VV93_RS19445 3d113f14d1a28577eb00b68a28baff5f 228 Pfam PF00702 haloacid dehalogenase-like hydrolase 28 149 1.9E-29 T 23-04-2016 VV93_RS19445 3d113f14d1a28577eb00b68a28baff5f 228 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 36 212 1.9E-46 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 VV93_RS19445 3d113f14d1a28577eb00b68a28baff5f 228 PANTHER PTHR24093 1 215 1.8E-100 T 23-04-2016 VV93_RS19445 3d113f14d1a28577eb00b68a28baff5f 228 PANTHER PTHR24093:SF319 1 215 1.8E-100 T 23-04-2016 VV93_RS19445 3d113f14d1a28577eb00b68a28baff5f 228 SUPERFAMILY SSF56784 51 216 2.1E-51 T 23-04-2016 IPR023214 HAD-like domain VV93_RS19445 3d113f14d1a28577eb00b68a28baff5f 228 Gene3D G3DSA:3.40.50.1000 63 182 2.4E-44 T 23-04-2016 IPR023214 HAD-like domain VV93_RS14555 756b8622d49308e8771e6e5d8c3f9908 322 PANTHER PTHR11082:SF25 1 320 5.5E-150 T 23-04-2016 VV93_RS14555 756b8622d49308e8771e6e5d8c3f9908 322 PANTHER PTHR11082 1 320 5.5E-150 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV93_RS14555 756b8622d49308e8771e6e5d8c3f9908 322 PIRSF PIRSF006621 1 321 2.3E-102 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV93_RS14555 756b8622d49308e8771e6e5d8c3f9908 322 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 50.219 T 23-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 VV93_RS14555 756b8622d49308e8771e6e5d8c3f9908 322 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 3.3E-134 T 23-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 VV93_RS14555 756b8622d49308e8771e6e5d8c3f9908 322 Pfam PF01207 Dihydrouridine synthase (Dus) 13 314 4.2E-112 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV93_RS14555 756b8622d49308e8771e6e5d8c3f9908 322 SUPERFAMILY SSF51395 10 319 1.03E-90 T 23-04-2016 VV93_RS14555 756b8622d49308e8771e6e5d8c3f9908 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV93_RS14555 756b8622d49308e8771e6e5d8c3f9908 322 Gene3D G3DSA:3.20.20.70 7 245 3.2E-84 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS14555 756b8622d49308e8771e6e5d8c3f9908 322 Gene3D G3DSA:1.10.1200.80 252 320 2.2E-19 T 23-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 VV93_RS01360 2bff6237cfad955cd0487dd2db91fb33 658 SUPERFAMILY SSF52540 175 575 6.45E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01360 2bff6237cfad955cd0487dd2db91fb33 658 PANTHER PTHR37937 311 592 2.7E-24 T 23-04-2016 VV93_RS01360 2bff6237cfad955cd0487dd2db91fb33 658 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 174 563 3.0E-116 T 23-04-2016 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain VV93_RS01360 2bff6237cfad955cd0487dd2db91fb33 658 PANTHER PTHR37937:SF1 311 592 2.7E-24 T 23-04-2016 VV93_RS01360 2bff6237cfad955cd0487dd2db91fb33 658 Gene3D G3DSA:3.40.50.300 172 250 2.3E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01360 2bff6237cfad955cd0487dd2db91fb33 658 Gene3D G3DSA:3.40.50.300 368 569 2.3E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01360 2bff6237cfad955cd0487dd2db91fb33 658 Gene3D G3DSA:1.10.8.80 251 361 6.0E-22 T 23-04-2016 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 PRINTS PR00415 Aconitase family signature 411 422 7.1E-26 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 PRINTS PR00415 Aconitase family signature 214 229 7.1E-26 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 PRINTS PR00415 Aconitase family signature 171 179 7.1E-26 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 PRINTS PR00415 Aconitase family signature 147 160 7.1E-26 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 PRINTS PR00415 Aconitase family signature 369 383 7.1E-26 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 PRINTS PR00415 Aconitase family signature 473 486 7.1E-26 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 PRINTS PR00415 Aconitase family signature 276 289 7.1E-26 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 PRINTS PR00415 Aconitase family signature 290 303 7.1E-26 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 PRINTS PR00415 Aconitase family signature 200 213 7.1E-26 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 Gene3D G3DSA:3.30.499.10 31 245 1.1E-59 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 11 866 0.0 T 23-04-2016 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|UniPathway: UPA00946 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 SUPERFAMILY SSF53732 20 600 2.88E-185 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 37 864 2.8E-286 T 23-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 Gene3D G3DSA:3.30.499.10 366 554 9.1E-56 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 Gene3D G3DSA:3.20.19.10 614 864 1.3E-64 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 SUPERFAMILY SSF52016 607 865 6.08E-68 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 Pfam PF00694 Aconitase C-terminal domain 665 796 1.2E-30 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 PANTHER PTHR11670:SF43 11 685 0.0 T 23-04-2016 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 PANTHER PTHR11670:SF43 728 869 0.0 T 23-04-2016 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 PANTHER PTHR11670 11 685 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 PANTHER PTHR11670 728 869 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 Pfam PF00330 Aconitase family (aconitate hydratase) 79 542 8.1E-147 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS07355 f07f0cc0e1fbf51ed4bc0a70fe621870 871 Gene3D G3DSA:3.40.1060.10 247 364 4.9E-33 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS15205 2f1da5cb47d2bb0b69897fb1bd444af8 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS15205 2f1da5cb47d2bb0b69897fb1bd444af8 513 Gene3D G3DSA:3.40.50.300 94 382 5.9E-113 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15205 2f1da5cb47d2bb0b69897fb1bd444af8 513 PANTHER PTHR15184:SF3 1 496 6.4E-290 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS15205 2f1da5cb47d2bb0b69897fb1bd444af8 513 PANTHER PTHR15184 1 496 6.4E-290 T 23-04-2016 VV93_RS15205 2f1da5cb47d2bb0b69897fb1bd444af8 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 1.7E-250 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS15205 2f1da5cb47d2bb0b69897fb1bd444af8 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.539 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS15205 2f1da5cb47d2bb0b69897fb1bd444af8 513 SUPERFAMILY SSF52540 96 381 1.16E-94 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15205 2f1da5cb47d2bb0b69897fb1bd444af8 513 SUPERFAMILY SSF47917 383 511 6.02E-45 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS15205 2f1da5cb47d2bb0b69897fb1bd444af8 513 Gene3D G3DSA:2.40.30.20 1 93 4.7E-30 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS15205 2f1da5cb47d2bb0b69897fb1bd444af8 513 Gene3D G3DSA:1.20.150.20 383 510 9.9E-47 T 23-04-2016 VV93_RS15205 2f1da5cb47d2bb0b69897fb1bd444af8 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 7.4E-73 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS15205 2f1da5cb47d2bb0b69897fb1bd444af8 513 SUPERFAMILY SSF50615 10 94 3.73E-26 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS15205 2f1da5cb47d2bb0b69897fb1bd444af8 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 6.8E-14 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS15205 2f1da5cb47d2bb0b69897fb1bd444af8 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.0E-43 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS02840 d0dec83904f7f6393afa5c6d9be114a5 420 SUPERFAMILY SSF53067 8 221 1.71E-59 T 23-04-2016 VV93_RS02840 d0dec83904f7f6393afa5c6d9be114a5 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 2.5E-28 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 VV93_RS02840 d0dec83904f7f6393afa5c6d9be114a5 420 PANTHER PTHR32432:SF4 1 420 2.8E-166 T 23-04-2016 VV93_RS02840 d0dec83904f7f6393afa5c6d9be114a5 420 Pfam PF14450 Cell division protein FtsA 207 381 1.9E-24 T 23-04-2016 VV93_RS02840 d0dec83904f7f6393afa5c6d9be114a5 420 Gene3D G3DSA:3.30.420.40 168 208 1.0E-23 T 23-04-2016 VV93_RS02840 d0dec83904f7f6393afa5c6d9be114a5 420 Gene3D G3DSA:3.30.420.40 3 83 1.0E-23 T 23-04-2016 VV93_RS02840 d0dec83904f7f6393afa5c6d9be114a5 420 Gene3D G3DSA:3.30.420.40 298 359 1.6E-26 T 23-04-2016 VV93_RS02840 d0dec83904f7f6393afa5c6d9be114a5 420 Gene3D G3DSA:3.30.420.40 209 234 1.6E-26 T 23-04-2016 VV93_RS02840 d0dec83904f7f6393afa5c6d9be114a5 420 PANTHER PTHR32432 1 420 2.8E-166 T 23-04-2016 VV93_RS02840 d0dec83904f7f6393afa5c6d9be114a5 420 Gene3D G3DSA:3.30.1490.110 100 166 1.9E-13 T 23-04-2016 VV93_RS02840 d0dec83904f7f6393afa5c6d9be114a5 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.297 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 VV93_RS02840 d0dec83904f7f6393afa5c6d9be114a5 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.0E-150 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 VV93_RS02840 d0dec83904f7f6393afa5c6d9be114a5 420 SMART SM00842 10 196 3.3E-94 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 VV93_RS02840 d0dec83904f7f6393afa5c6d9be114a5 420 PIRSF PIRSF003101 1 420 4.2E-146 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 VV93_RS02840 d0dec83904f7f6393afa5c6d9be114a5 420 SUPERFAMILY SSF53067 198 384 3.02E-46 T 23-04-2016 VV93_RS02840 d0dec83904f7f6393afa5c6d9be114a5 420 Gene3D G3DSA:3.90.640.10 235 297 2.3E-19 T 23-04-2016 VV93_RS12625 a8c914624d0bb57cf95fcb836cf422f2 172 PANTHER PTHR35799 2 169 5.6E-100 T 23-04-2016 VV93_RS12625 a8c914624d0bb57cf95fcb836cf422f2 172 SUPERFAMILY SSF63411 4 162 3.85E-66 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV93_RS12625 a8c914624d0bb57cf95fcb836cf422f2 172 PIRSF PIRSF006160 1 162 8.2E-67 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV93_RS12625 a8c914624d0bb57cf95fcb836cf422f2 172 Gene3D G3DSA:3.30.1360.80 1 171 4.8E-76 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV93_RS12625 a8c914624d0bb57cf95fcb836cf422f2 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.585 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV93_RS12625 a8c914624d0bb57cf95fcb836cf422f2 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 6.0E-84 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV93_RS12625 a8c914624d0bb57cf95fcb836cf422f2 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 8.7E-51 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV93_RS12625 a8c914624d0bb57cf95fcb836cf422f2 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 8.7E-51 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV93_RS12625 a8c914624d0bb57cf95fcb836cf422f2 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 8.7E-51 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV93_RS12625 a8c914624d0bb57cf95fcb836cf422f2 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 8.7E-51 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV93_RS12625 a8c914624d0bb57cf95fcb836cf422f2 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 8.7E-51 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV93_RS12625 a8c914624d0bb57cf95fcb836cf422f2 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 1.6E-61 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV93_RS07645 a1304b9b861eeefbfc2a32bdebe2269c 256 PANTHER PTHR23416:SF53 138 252 1.1E-27 T 23-04-2016 VV93_RS07645 a1304b9b861eeefbfc2a32bdebe2269c 256 Gene3D G3DSA:2.160.10.10 112 252 7.8E-37 T 23-04-2016 VV93_RS07645 a1304b9b861eeefbfc2a32bdebe2269c 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 202 233 4.2E-9 T 23-04-2016 IPR001451 Hexapeptide repeat VV93_RS07645 a1304b9b861eeefbfc2a32bdebe2269c 256 SUPERFAMILY SSF51161 94 252 2.23E-31 T 23-04-2016 IPR011004 Trimeric LpxA-like VV93_RS07645 a1304b9b861eeefbfc2a32bdebe2269c 256 PANTHER PTHR23416 138 252 1.1E-27 T 23-04-2016 VV93_RS07645 a1304b9b861eeefbfc2a32bdebe2269c 256 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 207 235 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VV93_RS02665 b40625423efb081d2dc1a20c18bf83d1 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VV93_RS02665 b40625423efb081d2dc1a20c18bf83d1 476 PANTHER PTHR10584:SF159 1 340 3.6E-140 T 23-04-2016 VV93_RS02665 b40625423efb081d2dc1a20c18bf83d1 476 Pfam PF01467 Cytidylyltransferase-like 345 468 1.2E-15 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VV93_RS02665 b40625423efb081d2dc1a20c18bf83d1 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.696 T 23-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 VV93_RS02665 b40625423efb081d2dc1a20c18bf83d1 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 5.4E-18 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VV93_RS02665 b40625423efb081d2dc1a20c18bf83d1 476 PANTHER PTHR10584 1 340 3.6E-140 T 23-04-2016 VV93_RS02665 b40625423efb081d2dc1a20c18bf83d1 476 Gene3D G3DSA:3.40.50.620 340 461 8.1E-36 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS02665 b40625423efb081d2dc1a20c18bf83d1 476 SUPERFAMILY SSF53613 12 304 5.61E-58 T 23-04-2016 IPR029056 Ribokinase-like VV93_RS02665 b40625423efb081d2dc1a20c18bf83d1 476 Gene3D G3DSA:3.40.1190.20 13 312 3.7E-68 T 23-04-2016 IPR029056 Ribokinase-like VV93_RS02665 b40625423efb081d2dc1a20c18bf83d1 476 SUPERFAMILY SSF52374 340 471 2.61E-23 T 23-04-2016 VV93_RS02665 b40625423efb081d2dc1a20c18bf83d1 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 3.6E-125 T 23-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 VV93_RS02665 b40625423efb081d2dc1a20c18bf83d1 476 Pfam PF00294 pfkB family carbohydrate kinase 13 302 1.3E-46 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB VV93_RS02665 b40625423efb081d2dc1a20c18bf83d1 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 5.3E-62 T 23-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 VV93_RS00090 c9c450ab6ae0fb8b118332b670a26027 723 Gene3D G3DSA:1.10.1040.10 499 593 2.5E-22 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VV93_RS00090 c9c450ab6ae0fb8b118332b670a26027 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 23-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VV93_RS00090 c9c450ab6ae0fb8b118332b670a26027 723 SUPERFAMILY SSF48179 625 715 1.19E-24 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VV93_RS00090 c9c450ab6ae0fb8b118332b670a26027 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.41 T 23-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VV93_RS00090 c9c450ab6ae0fb8b118332b670a26027 723 SUPERFAMILY SSF51735 314 496 7.3E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS00090 c9c450ab6ae0fb8b118332b670a26027 723 SUPERFAMILY SSF48179 496 607 1.02E-28 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VV93_RS00090 c9c450ab6ae0fb8b118332b670a26027 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 1.0E-26 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VV93_RS00090 c9c450ab6ae0fb8b118332b670a26027 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 711 3.7E-5 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VV93_RS00090 c9c450ab6ae0fb8b118332b670a26027 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 8.4E-59 T 23-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VV93_RS00090 c9c450ab6ae0fb8b118332b670a26027 723 Gene3D G3DSA:1.10.1040.10 633 716 2.3E-19 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VV93_RS00090 c9c450ab6ae0fb8b118332b670a26027 723 Gene3D G3DSA:3.90.226.10 4 201 8.6E-59 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS00090 c9c450ab6ae0fb8b118332b670a26027 723 Gene3D G3DSA:3.90.226.10 235 296 8.6E-59 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS00090 c9c450ab6ae0fb8b118332b670a26027 723 Gene3D G3DSA:3.40.50.720 305 498 1.5E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS00090 c9c450ab6ae0fb8b118332b670a26027 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 209 2.3E-40 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 VV93_RS00090 c9c450ab6ae0fb8b118332b670a26027 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 23-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VV93_RS00090 c9c450ab6ae0fb8b118332b670a26027 723 SUPERFAMILY SSF52096 2 304 8.89E-67 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS00090 c9c450ab6ae0fb8b118332b670a26027 723 PANTHER PTHR23309 8 719 0.0 T 23-04-2016 VV93_RS00090 c9c450ab6ae0fb8b118332b670a26027 723 PANTHER PTHR23309:SF18 8 719 0.0 T 23-04-2016 VV93_RS04915 aa7eef59fd434c8c2fd6420efe697e38 388 SUPERFAMILY SSF56059 1 238 1.77E-79 T 23-04-2016 VV93_RS04915 aa7eef59fd434c8c2fd6420efe697e38 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.712 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VV93_RS04915 aa7eef59fd434c8c2fd6420efe697e38 388 Pfam PF08442 ATP-grasp domain 2 203 2.5E-79 T 23-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VV93_RS04915 aa7eef59fd434c8c2fd6420efe697e38 388 Gene3D G3DSA:3.40.50.261 241 383 3.4E-67 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VV93_RS04915 aa7eef59fd434c8c2fd6420efe697e38 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 23-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VV93_RS04915 aa7eef59fd434c8c2fd6420efe697e38 388 Gene3D G3DSA:3.30.470.20 96 239 1.7E-57 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VV93_RS04915 aa7eef59fd434c8c2fd6420efe697e38 388 SUPERFAMILY SSF52210 239 385 9.42E-55 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VV93_RS04915 aa7eef59fd434c8c2fd6420efe697e38 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 5.8E-174 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VV93_RS04915 aa7eef59fd434c8c2fd6420efe697e38 388 Pfam PF00549 CoA-ligase 262 382 1.2E-25 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VV93_RS04915 aa7eef59fd434c8c2fd6420efe697e38 388 Gene3D G3DSA:3.30.1490.20 22 95 1.5E-31 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VV93_RS04915 aa7eef59fd434c8c2fd6420efe697e38 388 PIRSF PIRSF001554 1 388 3.0E-155 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VV93_RS04915 aa7eef59fd434c8c2fd6420efe697e38 388 PANTHER PTHR11815 1 388 4.5E-230 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VV93_RS02605 a8c4dba4229d4acbc2252b966b50eb01 119 SMART SM00905 6 116 1.7E-48 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VV93_RS02605 a8c4dba4229d4acbc2252b966b50eb01 119 Pfam PF02152 Dihydroneopterin aldolase 6 115 1.3E-32 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VV93_RS02605 a8c4dba4229d4acbc2252b966b50eb01 119 SUPERFAMILY SSF55620 3 117 6.12E-37 T 23-04-2016 VV93_RS02605 a8c4dba4229d4acbc2252b966b50eb01 119 TIGRFAM TIGR00526 folB_dom: FolB domain 4 117 1.9E-35 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VV93_RS02605 a8c4dba4229d4acbc2252b966b50eb01 119 PANTHER PTHR20941 4 119 3.0E-32 T 23-04-2016 VV93_RS02605 a8c4dba4229d4acbc2252b966b50eb01 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 116 2.2E-29 T 23-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VV93_RS02605 a8c4dba4229d4acbc2252b966b50eb01 119 Gene3D G3DSA:3.30.1130.10 2 117 1.7E-42 T 23-04-2016 VV93_RS13930 46ffb0072566f1c3398f626cc3ebd866 184 SUPERFAMILY SSF56235 2 172 4.68E-58 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VV93_RS13930 46ffb0072566f1c3398f626cc3ebd866 184 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 2.9E-87 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VV93_RS13930 46ffb0072566f1c3398f626cc3ebd866 184 PIRSF PIRSF039093 1 175 5.8E-88 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VV93_RS13930 46ffb0072566f1c3398f626cc3ebd866 184 Pfam PF00227 Proteasome subunit 2 170 2.3E-24 T 23-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 VV93_RS13930 46ffb0072566f1c3398f626cc3ebd866 184 Gene3D G3DSA:3.60.20.10 2 173 8.8E-86 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VV93_RS13930 46ffb0072566f1c3398f626cc3ebd866 184 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.2 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VV93_RS13930 46ffb0072566f1c3398f626cc3ebd866 184 PANTHER PTHR32194 2 177 1.2E-127 T 23-04-2016 VV93_RS11770 afc4db6020bfbf8323f3add8c30e61ed 298 Gene3D G3DSA:3.40.190.10 173 262 2.1E-16 T 23-04-2016 VV93_RS11770 afc4db6020bfbf8323f3add8c30e61ed 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.3E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS11770 afc4db6020bfbf8323f3add8c30e61ed 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.3E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS11770 afc4db6020bfbf8323f3add8c30e61ed 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.3E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS11770 afc4db6020bfbf8323f3add8c30e61ed 298 PANTHER PTHR30126:SF11 5 292 4.5E-87 T 23-04-2016 VV93_RS11770 afc4db6020bfbf8323f3add8c30e61ed 298 Pfam PF03466 LysR substrate binding domain 92 293 3.1E-46 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS11770 afc4db6020bfbf8323f3add8c30e61ed 298 SUPERFAMILY SSF53850 92 296 6.4E-41 T 23-04-2016 VV93_RS11770 afc4db6020bfbf8323f3add8c30e61ed 298 Gene3D G3DSA:1.10.10.10 5 85 6.8E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS11770 afc4db6020bfbf8323f3add8c30e61ed 298 PANTHER PTHR30126 5 292 4.5E-87 T 23-04-2016 VV93_RS11770 afc4db6020bfbf8323f3add8c30e61ed 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.1E-14 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS11770 afc4db6020bfbf8323f3add8c30e61ed 298 Gene3D G3DSA:3.40.190.10 91 172 2.1E-13 T 23-04-2016 VV93_RS11770 afc4db6020bfbf8323f3add8c30e61ed 298 SUPERFAMILY SSF46785 5 113 2.45E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS12715 1c1c1e690a930269884cf5569782c4d8 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS12715 1c1c1e690a930269884cf5569782c4d8 395 SUPERFAMILY SSF53633 6 236 5.89E-74 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS12715 1c1c1e690a930269884cf5569782c4d8 395 PANTHER PTHR21499:SF27 1 390 4.4E-125 T 23-04-2016 VV93_RS12715 1c1c1e690a930269884cf5569782c4d8 395 Pfam PF00696 Amino acid kinase family 5 231 8.3E-53 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS12715 1c1c1e690a930269884cf5569782c4d8 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 64 379 7.6E-77 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS12715 1c1c1e690a930269884cf5569782c4d8 395 Gene3D G3DSA:3.40.1160.10 3 245 1.3E-70 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS12715 1c1c1e690a930269884cf5569782c4d8 395 PANTHER PTHR21499 1 390 4.4E-125 T 23-04-2016 VV93_RS14435 ae815f0be22e5f1c50de6257ccaffd52 320 SUPERFAMILY SSF53784 3 310 1.2E-112 T 23-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS14435 ae815f0be22e5f1c50de6257ccaffd52 320 PANTHER PTHR13697 2 309 3.0E-134 T 23-04-2016 VV93_RS14435 ae815f0be22e5f1c50de6257ccaffd52 320 Pfam PF00365 Phosphofructokinase 4 276 6.5E-108 T 23-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS14435 ae815f0be22e5f1c50de6257ccaffd52 320 PIRSF PIRSF000532 1 320 2.3E-126 T 23-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 VV93_RS14435 ae815f0be22e5f1c50de6257ccaffd52 320 Gene3D G3DSA:3.40.50.450 3 191 3.1E-74 T 23-04-2016 VV93_RS14435 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 5.94E-83 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS14435 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 5.94E-83 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS14435 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 5.94E-83 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS14435 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 5.94E-83 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS14435 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 5.94E-83 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS14435 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 5.94E-83 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS14435 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 5.94E-83 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS14435 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 5.94E-83 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS14435 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 5.94E-83 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS14435 ae815f0be22e5f1c50de6257ccaffd52 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 6.5E-129 T 23-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 VV93_RS14435 ae815f0be22e5f1c50de6257ccaffd52 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.142 T 23-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 VV93_RS14435 ae815f0be22e5f1c50de6257ccaffd52 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 23-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS15385 680a4076d802a365edd0c90f75a703c7 250 Gene3D G3DSA:3.40.190.10 103 202 5.3E-28 T 23-04-2016 VV93_RS15385 680a4076d802a365edd0c90f75a703c7 250 PANTHER PTHR18966 24 248 7.2E-114 T 23-04-2016 VV93_RS15385 680a4076d802a365edd0c90f75a703c7 250 PANTHER PTHR18966:SF205 24 248 7.2E-114 T 23-04-2016 VV93_RS15385 680a4076d802a365edd0c90f75a703c7 250 Gene3D G3DSA:3.40.190.10 206 249 5.9E-34 T 23-04-2016 VV93_RS15385 680a4076d802a365edd0c90f75a703c7 250 Gene3D G3DSA:3.40.190.10 24 102 5.9E-34 T 23-04-2016 VV93_RS15385 680a4076d802a365edd0c90f75a703c7 250 SUPERFAMILY SSF53850 1 248 6.09E-57 T 23-04-2016 VV93_RS15385 680a4076d802a365edd0c90f75a703c7 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 245 5.1E-55 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV93_RS15385 680a4076d802a365edd0c90f75a703c7 250 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 23-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 VV93_RS15385 680a4076d802a365edd0c90f75a703c7 250 SMART SM00062 26 247 3.2E-75 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV93_RS14545 86c0f566d08f35c10d9213dbb913a6b8 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 1.5E-243 T 23-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 VV93_RS14545 86c0f566d08f35c10d9213dbb913a6b8 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV93_RS14545 86c0f566d08f35c10d9213dbb913a6b8 448 Gene3D G3DSA:3.30.470.20 204 444 6.2E-102 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VV93_RS14545 86c0f566d08f35c10d9213dbb913a6b8 448 SUPERFAMILY SSF56059 83 346 9.9E-70 T 23-04-2016 VV93_RS14545 86c0f566d08f35c10d9213dbb913a6b8 448 SUPERFAMILY SSF51246 331 444 9.94E-44 T 23-04-2016 IPR011054 Rudiment single hybrid motif VV93_RS14545 86c0f566d08f35c10d9213dbb913a6b8 448 Gene3D G3DSA:3.40.50.20 1 129 1.0E-49 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS14545 86c0f566d08f35c10d9213dbb913a6b8 448 SUPERFAMILY SSF52440 1 113 4.6E-46 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS14545 86c0f566d08f35c10d9213dbb913a6b8 448 Gene3D G3DSA:3.30.1490.20 130 203 3.3E-29 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VV93_RS14545 86c0f566d08f35c10d9213dbb913a6b8 448 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 8.6E-38 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal VV93_RS14545 86c0f566d08f35c10d9213dbb913a6b8 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.9E-43 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain VV93_RS14545 86c0f566d08f35c10d9213dbb913a6b8 448 PANTHER PTHR18866 1 442 8.2E-303 T 23-04-2016 VV93_RS14545 86c0f566d08f35c10d9213dbb913a6b8 448 SMART SM00878 336 441 6.3E-65 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal VV93_RS14545 86c0f566d08f35c10d9213dbb913a6b8 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 4.3E-83 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV93_RS14545 86c0f566d08f35c10d9213dbb913a6b8 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV93_RS04595 a56ced8cc3b3f8098253bf11700e15bc 259 PANTHER PTHR34933 1 256 3.2E-122 T 23-04-2016 VV93_RS04595 a56ced8cc3b3f8098253bf11700e15bc 259 PRINTS PR01008 Flagellar L-ring protein signature 175 190 6.6E-21 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VV93_RS04595 a56ced8cc3b3f8098253bf11700e15bc 259 PRINTS PR01008 Flagellar L-ring protein signature 201 217 6.6E-21 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VV93_RS04595 a56ced8cc3b3f8098253bf11700e15bc 259 PRINTS PR01008 Flagellar L-ring protein signature 238 252 6.6E-21 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VV93_RS04595 a56ced8cc3b3f8098253bf11700e15bc 259 PRINTS PR01008 Flagellar L-ring protein signature 222 236 6.6E-21 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VV93_RS04595 a56ced8cc3b3f8098253bf11700e15bc 259 PRINTS PR01008 Flagellar L-ring protein signature 102 114 6.6E-21 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VV93_RS04595 a56ced8cc3b3f8098253bf11700e15bc 259 PANTHER PTHR34933:SF2 1 256 3.2E-122 T 23-04-2016 VV93_RS04595 a56ced8cc3b3f8098253bf11700e15bc 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 259 27.909 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VV93_RS04595 a56ced8cc3b3f8098253bf11700e15bc 259 Pfam PF02107 Flagellar L-ring protein 80 256 1.2E-57 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VV93_RS04185 ca49c4394aab77416e01111dcab34279 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 7.3E-199 T 23-04-2016 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 VV93_RS04185 ca49c4394aab77416e01111dcab34279 344 PANTHER PTHR24220 3 332 2.6E-176 T 23-04-2016 VV93_RS04185 ca49c4394aab77416e01111dcab34279 344 SMART SM00930 265 340 3.7E-29 T 23-04-2016 IPR018449 NIL domain VV93_RS04185 ca49c4394aab77416e01111dcab34279 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS04185 ca49c4394aab77416e01111dcab34279 344 SUPERFAMILY SSF52540 1 239 1.69E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04185 ca49c4394aab77416e01111dcab34279 344 PANTHER PTHR24220:SF455 3 332 2.6E-176 T 23-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 VV93_RS04185 ca49c4394aab77416e01111dcab34279 344 SMART SM00382 30 235 7.0E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS04185 ca49c4394aab77416e01111dcab34279 344 SUPERFAMILY SSF55021 248 343 1.26E-25 T 23-04-2016 VV93_RS04185 ca49c4394aab77416e01111dcab34279 344 Gene3D G3DSA:3.30.70.260 237 343 6.3E-32 T 23-04-2016 VV93_RS04185 ca49c4394aab77416e01111dcab34279 344 Pfam PF09383 NIL domain 268 339 4.5E-21 T 23-04-2016 IPR018449 NIL domain VV93_RS04185 ca49c4394aab77416e01111dcab34279 344 Pfam PF00005 ABC transporter 21 169 1.3E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS04185 ca49c4394aab77416e01111dcab34279 344 Gene3D G3DSA:3.40.50.300 1 236 1.2E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04140 a1220bbda89dbe1a4e760372c4e1f52d 259 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 158 7.4E-32 T 23-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VV93_RS04140 a1220bbda89dbe1a4e760372c4e1f52d 259 SUPERFAMILY SSF88723 4 164 8.83E-39 T 23-04-2016 IPR029060 PIN domain-like VV93_RS04140 a1220bbda89dbe1a4e760372c4e1f52d 259 Gene3D G3DSA:3.40.50.1010 4 179 5.8E-49 T 23-04-2016 IPR029060 PIN domain-like VV93_RS04140 a1220bbda89dbe1a4e760372c4e1f52d 259 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 255 7.3E-19 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VV93_RS04140 a1220bbda89dbe1a4e760372c4e1f52d 259 SMART SM00475 3 254 1.0E-64 T 23-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VV93_RS04140 a1220bbda89dbe1a4e760372c4e1f52d 259 SUPERFAMILY SSF47807 164 254 2.69E-17 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VV93_RS04140 a1220bbda89dbe1a4e760372c4e1f52d 259 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 46.176 T 23-04-2016 IPR022895 Flap endonuclease Xni GO:0048256 VV93_RS04140 a1220bbda89dbe1a4e760372c4e1f52d 259 PANTHER PTHR10133:SF39 1 258 3.0E-150 T 23-04-2016 VV93_RS04140 a1220bbda89dbe1a4e760372c4e1f52d 259 Gene3D G3DSA:1.10.150.20 180 238 2.0E-13 T 23-04-2016 VV93_RS04140 a1220bbda89dbe1a4e760372c4e1f52d 259 SMART SM00279 167 202 2.1E-8 T 23-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VV93_RS04140 a1220bbda89dbe1a4e760372c4e1f52d 259 PANTHER PTHR10133 1 258 3.0E-150 T 23-04-2016 VV93_RS11440 4db732d1029a526c34050a99684c84d1 804 Pfam PF07244 Surface antigen variable number repeat 347 420 2.7E-16 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 VV93_RS11440 4db732d1029a526c34050a99684c84d1 804 Pfam PF07244 Surface antigen variable number repeat 266 344 5.9E-12 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 VV93_RS11440 4db732d1029a526c34050a99684c84d1 804 Pfam PF07244 Surface antigen variable number repeat 176 263 4.8E-16 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 VV93_RS11440 4db732d1029a526c34050a99684c84d1 804 Pfam PF07244 Surface antigen variable number repeat 92 172 5.6E-12 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 VV93_RS11440 4db732d1029a526c34050a99684c84d1 804 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 804 2.0E-278 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VV93_RS11440 4db732d1029a526c34050a99684c84d1 804 PIRSF PIRSF006076 1 804 2.8E-245 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VV93_RS11440 4db732d1029a526c34050a99684c84d1 804 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 804 25.725 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VV93_RS11440 4db732d1029a526c34050a99684c84d1 804 Pfam PF01103 Surface antigen 448 804 4.9E-90 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 VV93_RS11440 4db732d1029a526c34050a99684c84d1 804 PANTHER PTHR12815:SF11 5 675 5.4E-291 T 23-04-2016 VV93_RS11440 4db732d1029a526c34050a99684c84d1 804 PANTHER PTHR12815:SF11 691 804 5.4E-291 T 23-04-2016 VV93_RS11440 4db732d1029a526c34050a99684c84d1 804 PANTHER PTHR12815 5 675 5.4E-291 T 23-04-2016 VV93_RS11440 4db732d1029a526c34050a99684c84d1 804 PANTHER PTHR12815 691 804 5.4E-291 T 23-04-2016 VV93_RS06450 21ea8d9a2ef008ae6c42b648466e558f 374 PANTHER PTHR11933 1 370 2.7E-214 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 VV93_RS06450 21ea8d9a2ef008ae6c42b648466e558f 374 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 366 40.093 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 VV93_RS06450 21ea8d9a2ef008ae6c42b648466e558f 374 PANTHER PTHR11933:SF10 1 370 2.7E-214 T 23-04-2016 VV93_RS06450 21ea8d9a2ef008ae6c42b648466e558f 374 Gene3D G3DSA:2.30.30.280 216 285 1.1E-30 T 23-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 VV93_RS06450 21ea8d9a2ef008ae6c42b648466e558f 374 Gene3D G3DSA:3.40.50.620 4 214 1.1E-97 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS06450 21ea8d9a2ef008ae6c42b648466e558f 374 SUPERFAMILY SSF52402 5 247 3.09E-56 T 23-04-2016 VV93_RS06450 21ea8d9a2ef008ae6c42b648466e558f 374 Pfam PF03054 tRNA methyl transferase 7 365 3.3E-143 T 23-04-2016 VV93_RS06450 21ea8d9a2ef008ae6c42b648466e558f 374 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 365 3.9E-152 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 VV93_RS06450 21ea8d9a2ef008ae6c42b648466e558f 374 Gene3D G3DSA:2.40.30.10 288 370 1.8E-33 T 23-04-2016 VV93_RS15190 f50477ca2a47fd6b4f70fa3c99c223dd 140 Gene3D G3DSA:1.20.5.440 93 135 3.9E-22 T 23-04-2016 VV93_RS15190 f50477ca2a47fd6b4f70fa3c99c223dd 140 PANTHER PTHR13822 1 140 5.1E-44 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VV93_RS15190 f50477ca2a47fd6b4f70fa3c99c223dd 140 SUPERFAMILY SSF51344 5 87 2.62E-24 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VV93_RS15190 f50477ca2a47fd6b4f70fa3c99c223dd 140 SUPERFAMILY SSF46604 89 138 2.28E-13 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VV93_RS15190 f50477ca2a47fd6b4f70fa3c99c223dd 140 Gene3D G3DSA:2.60.15.10 5 92 9.7E-30 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VV93_RS15190 f50477ca2a47fd6b4f70fa3c99c223dd 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 1.6E-43 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VV93_RS15190 f50477ca2a47fd6b4f70fa3c99c223dd 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 4.0E-40 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VV93_RS15190 f50477ca2a47fd6b4f70fa3c99c223dd 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 2.4E-10 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VV93_RS15190 f50477ca2a47fd6b4f70fa3c99c223dd 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 3.6E-28 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VV93_RS15190 f50477ca2a47fd6b4f70fa3c99c223dd 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.511 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VV93_RS02230 5ee584ce605d6555d512c64d4327ade1 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 11 319 2.5E-112 T 23-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family VV93_RS02230 5ee584ce605d6555d512c64d4327ade1 322 PANTHER PTHR30024:SF13 1 322 2.4E-118 T 23-04-2016 VV93_RS02230 5ee584ce605d6555d512c64d4327ade1 322 Pfam PF16868 NMT1-like family 30 319 2.0E-97 T 23-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family VV93_RS02230 5ee584ce605d6555d512c64d4327ade1 322 Gene3D G3DSA:3.40.190.10 118 250 4.9E-36 T 23-04-2016 VV93_RS02230 5ee584ce605d6555d512c64d4327ade1 322 SUPERFAMILY SSF53850 25 321 3.21E-88 T 23-04-2016 VV93_RS02230 5ee584ce605d6555d512c64d4327ade1 322 Gene3D G3DSA:3.40.190.10 25 108 8.0E-67 T 23-04-2016 VV93_RS02230 5ee584ce605d6555d512c64d4327ade1 322 Gene3D G3DSA:3.40.190.10 251 320 8.0E-67 T 23-04-2016 VV93_RS02230 5ee584ce605d6555d512c64d4327ade1 322 PANTHER PTHR30024 1 322 2.4E-118 T 23-04-2016 VV93_RS08010 db70e59d91115265ec255da69b01d9b4 310 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 11 270 57.707 T 23-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 VV93_RS08010 db70e59d91115265ec255da69b01d9b4 310 PANTHER PTHR11807:SF16 1 268 7.4E-122 T 23-04-2016 VV93_RS08010 db70e59d91115265ec255da69b01d9b4 310 SUPERFAMILY SSF52402 29 255 2.0E-56 T 23-04-2016 VV93_RS08010 db70e59d91115265ec255da69b01d9b4 310 PIRSF PIRSF004976 1 274 3.1E-76 T 23-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 VV93_RS08010 db70e59d91115265ec255da69b01d9b4 310 Pfam PF01171 PP-loop family 43 203 1.7E-14 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal VV93_RS08010 db70e59d91115265ec255da69b01d9b4 310 PANTHER PTHR11807 1 268 7.4E-122 T 23-04-2016 VV93_RS08010 db70e59d91115265ec255da69b01d9b4 310 Gene3D G3DSA:3.40.50.620 26 207 1.3E-21 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS04270 f3276bb3661eb3a6b439b2cee3092f38 341 Gene3D G3DSA:1.10.8.60 143 221 1.5E-31 T 23-04-2016 VV93_RS04270 f3276bb3661eb3a6b439b2cee3092f38 341 PANTHER PTHR34388 1 341 4.4E-74 T 23-04-2016 VV93_RS04270 f3276bb3661eb3a6b439b2cee3092f38 341 Gene3D G3DSA:1.20.272.20 222 334 1.5E-43 T 23-04-2016 VV93_RS04270 f3276bb3661eb3a6b439b2cee3092f38 341 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 330 5.0E-107 T 23-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 VV93_RS04270 f3276bb3661eb3a6b439b2cee3092f38 341 Pfam PF06144 DNA polymerase III, delta subunit 20 189 6.9E-50 T 23-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 VV93_RS04270 f3276bb3661eb3a6b439b2cee3092f38 341 SUPERFAMILY SSF48019 211 332 2.55E-30 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VV93_RS04270 f3276bb3661eb3a6b439b2cee3092f38 341 Gene3D G3DSA:3.40.50.300 1 138 4.6E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04270 f3276bb3661eb3a6b439b2cee3092f38 341 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 328 3.2E-34 T 23-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS04270 f3276bb3661eb3a6b439b2cee3092f38 341 SUPERFAMILY SSF52540 1 208 3.72E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08355 60a388c1c31a55afbfd5e21ec9d0e5f4 157 Pfam PF13419 Haloacid dehalogenase-like hydrolase 28 132 1.3E-12 T 23-04-2016 IPR023214 HAD-like domain VV93_RS08355 60a388c1c31a55afbfd5e21ec9d0e5f4 157 PANTHER PTHR12725 27 138 4.6E-14 T 23-04-2016 VV93_RS08355 60a388c1c31a55afbfd5e21ec9d0e5f4 157 SUPERFAMILY SSF56784 1 136 4.64E-25 T 23-04-2016 IPR023214 HAD-like domain VV93_RS08355 60a388c1c31a55afbfd5e21ec9d0e5f4 157 Gene3D G3DSA:3.40.50.1000 27 155 8.8E-29 T 23-04-2016 IPR023214 HAD-like domain VV93_RS01975 3c299c74ea82d68fe276df747e0ca3d3 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.02 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VV93_RS01975 3c299c74ea82d68fe276df747e0ca3d3 302 SUPERFAMILY SSF52402 6 209 2.0E-74 T 23-04-2016 VV93_RS01975 3c299c74ea82d68fe276df747e0ca3d3 302 PIRSF PIRSF002936 1 302 9.9E-157 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VV93_RS01975 3c299c74ea82d68fe276df747e0ca3d3 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 8.4E-65 T 23-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 VV93_RS01975 3c299c74ea82d68fe276df747e0ca3d3 302 Gene3D G3DSA:3.40.50.620 3 210 4.5E-63 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS01975 3c299c74ea82d68fe276df747e0ca3d3 302 Gene3D G3DSA:3.40.50.620 244 253 4.5E-63 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS01975 3c299c74ea82d68fe276df747e0ca3d3 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.0E-163 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VV93_RS01975 3c299c74ea82d68fe276df747e0ca3d3 302 PANTHER PTHR23293 178 211 2.8E-97 T 23-04-2016 VV93_RS01975 3c299c74ea82d68fe276df747e0ca3d3 302 PANTHER PTHR23293 245 302 2.8E-97 T 23-04-2016 VV93_RS01975 3c299c74ea82d68fe276df747e0ca3d3 302 PANTHER PTHR23293 1 158 2.8E-97 T 23-04-2016 VV93_RS02640 84adb46f330130d5367bc436d729c106 226 PANTHER PTHR36536:SF3 1 226 5.8E-138 T 23-04-2016 VV93_RS02640 84adb46f330130d5367bc436d729c106 226 PANTHER PTHR36536 1 226 5.8E-138 T 23-04-2016 VV93_RS02640 84adb46f330130d5367bc436d729c106 226 Pfam PF01865 Protein of unknown function DUF47 7 223 3.4E-66 T 23-04-2016 IPR018445 Putative phosphate transport regulator VV93_RS02640 84adb46f330130d5367bc436d729c106 226 SUPERFAMILY SSF109755 32 216 3.84E-15 T 23-04-2016 VV93_RS02640 84adb46f330130d5367bc436d729c106 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 3 225 2.7E-68 T 23-04-2016 IPR002727 Protein of unknown function DUF47 VV93_RS08185 db4ace52047a26e26e709dde0cd07cc1 239 Gene3D G3DSA:3.40.50.300 5 217 2.1E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08185 db4ace52047a26e26e709dde0cd07cc1 239 SMART SM00382 29 213 1.4E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS08185 db4ace52047a26e26e709dde0cd07cc1 239 PANTHER PTHR24220:SF542 6 223 7.6E-122 T 23-04-2016 VV93_RS08185 db4ace52047a26e26e709dde0cd07cc1 239 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS08185 db4ace52047a26e26e709dde0cd07cc1 239 Pfam PF00005 ABC transporter 25 165 9.1E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS08185 db4ace52047a26e26e709dde0cd07cc1 239 PANTHER PTHR24220 6 223 7.6E-122 T 23-04-2016 VV93_RS08185 db4ace52047a26e26e709dde0cd07cc1 239 SUPERFAMILY SSF52540 5 217 1.98E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08955 6a2c979b895655851fb70c4edc103ea6 950 Pfam PF00704 Glycosyl hydrolases family 18 618 928 1.3E-20 T 23-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 VV93_RS08955 6a2c979b895655851fb70c4edc103ea6 950 Gene3D G3DSA:3.20.20.80 613 723 9.8E-48 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VV93_RS08955 6a2c979b895655851fb70c4edc103ea6 950 Gene3D G3DSA:3.20.20.80 761 947 9.8E-48 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VV93_RS08955 6a2c979b895655851fb70c4edc103ea6 950 SUPERFAMILY SSF51445 615 723 9.2E-37 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily VV93_RS08955 6a2c979b895655851fb70c4edc103ea6 950 SUPERFAMILY SSF51445 761 810 9.2E-37 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily VV93_RS08955 6a2c979b895655851fb70c4edc103ea6 950 SUPERFAMILY SSF51445 837 933 9.2E-37 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily VV93_RS08955 6a2c979b895655851fb70c4edc103ea6 950 SMART SM00636 616 929 0.0023 T 23-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 VV93_RS04695 330e9e2fbaedf3244fcb68b37c2d1c8f 284 SUPERFAMILY SSF48452 115 246 9.87E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS04695 330e9e2fbaedf3244fcb68b37c2d1c8f 284 PANTHER PTHR10438 6 134 5.3E-44 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VV93_RS04695 330e9e2fbaedf3244fcb68b37c2d1c8f 284 Gene3D G3DSA:1.25.40.10 110 196 1.5E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS04695 330e9e2fbaedf3244fcb68b37c2d1c8f 284 PANTHER PTHR10438:SF288 6 134 5.3E-44 T 23-04-2016 VV93_RS04695 330e9e2fbaedf3244fcb68b37c2d1c8f 284 Pfam PF14559 Tetratricopeptide repeat 125 190 1.2E-11 T 23-04-2016 VV93_RS04695 330e9e2fbaedf3244fcb68b37c2d1c8f 284 SUPERFAMILY SSF52833 4 111 4.62E-25 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS04695 330e9e2fbaedf3244fcb68b37c2d1c8f 284 Gene3D G3DSA:3.40.30.10 3 109 2.6E-20 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS04695 330e9e2fbaedf3244fcb68b37c2d1c8f 284 Gene3D G3DSA:1.25.40.10 198 284 8.3E-30 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS04695 330e9e2fbaedf3244fcb68b37c2d1c8f 284 Pfam PF14561 Tetratricopeptide repeat 195 284 8.7E-27 T 23-04-2016 VV93_RS04695 330e9e2fbaedf3244fcb68b37c2d1c8f 284 Pfam PF00085 Thioredoxin 7 109 3.1E-13 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 VV93_RS01540 d91943023b1c36f623d87e8111f811b9 351 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 226 2.6E-7 T 23-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 VV93_RS01540 d91943023b1c36f623d87e8111f811b9 351 Gene3D G3DSA:3.30.360.10 146 350 7.0E-32 T 23-04-2016 VV93_RS01540 d91943023b1c36f623d87e8111f811b9 351 SUPERFAMILY SSF55347 136 327 2.13E-27 T 23-04-2016 VV93_RS01540 d91943023b1c36f623d87e8111f811b9 351 SUPERFAMILY SSF51735 4 154 3.38E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01540 d91943023b1c36f623d87e8111f811b9 351 Gene3D G3DSA:3.40.50.720 2 145 2.3E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01540 d91943023b1c36f623d87e8111f811b9 351 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 125 1.3E-21 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 VV93_RS01540 d91943023b1c36f623d87e8111f811b9 351 PANTHER PTHR22604 4 349 1.6E-69 T 23-04-2016 VV93_RS01540 d91943023b1c36f623d87e8111f811b9 351 PANTHER PTHR22604:SF123 4 349 1.6E-69 T 23-04-2016 VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 PANTHER PTHR10887 155 177 1.4E-104 T 23-04-2016 VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 PANTHER PTHR10887 331 385 1.4E-104 T 23-04-2016 VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 PANTHER PTHR10887 872 1083 1.4E-104 T 23-04-2016 VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 Gene3D G3DSA:3.40.50.300 962 1079 1.9E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 Pfam PF13086 AAA domain 346 845 1.8E-12 T 23-04-2016 VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 Pfam PF13087 AAA domain 971 1079 1.2E-13 T 23-04-2016 VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 Gene3D G3DSA:3.40.50.300 894 923 6.8E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 Gene3D G3DSA:3.40.50.300 803 858 6.8E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 Gene3D G3DSA:3.40.50.300 317 466 6.8E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 PANTHER PTHR10887:SF350 402 457 1.4E-104 T 23-04-2016 VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 PANTHER PTHR10887:SF350 679 842 1.4E-104 T 23-04-2016 VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 PANTHER PTHR10887:SF350 155 177 1.4E-104 T 23-04-2016 VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 PANTHER PTHR10887:SF350 331 385 1.4E-104 T 23-04-2016 VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 PANTHER PTHR10887:SF350 872 1083 1.4E-104 T 23-04-2016 VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 SUPERFAMILY SSF52540 894 1083 2.71E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 SUPERFAMILY SSF52540 332 430 2.71E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 SUPERFAMILY SSF52540 527 576 2.71E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 SUPERFAMILY SSF52540 782 857 2.71E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 PANTHER PTHR10887 402 457 1.4E-104 T 23-04-2016 VV93_RS09900 e0e466d71d2452c7bb16ebd170886efd 1120 PANTHER PTHR10887 679 842 1.4E-104 T 23-04-2016 VV93_RS12440 133bfd27fd35089d653766d89397bbff 865 Gene3D G3DSA:3.30.499.10 402 519 8.7E-64 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS12440 133bfd27fd35089d653766d89397bbff 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS12440 133bfd27fd35089d653766d89397bbff 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 23-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VV93_RS12440 133bfd27fd35089d653766d89397bbff 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 2.5E-98 T 23-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VV93_RS12440 133bfd27fd35089d653766d89397bbff 865 Gene3D G3DSA:3.40.1060.10 520 682 4.9E-83 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS12440 133bfd27fd35089d653766d89397bbff 865 PANTHER PTHR11670 305 860 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS12440 133bfd27fd35089d653766d89397bbff 865 PIRSF PIRSF036687 1 859 0.0 T 23-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VV93_RS12440 133bfd27fd35089d653766d89397bbff 865 Gene3D G3DSA:3.30.499.10 684 859 5.2E-53 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS12440 133bfd27fd35089d653766d89397bbff 865 SUPERFAMILY SSF74778 2 160 1.57E-67 T 23-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VV93_RS12440 133bfd27fd35089d653766d89397bbff 865 SUPERFAMILY SSF53732 379 860 1.44E-146 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS12440 133bfd27fd35089d653766d89397bbff 865 Gene3D G3DSA:3.20.19.10 162 360 2.2E-94 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VV93_RS12440 133bfd27fd35089d653766d89397bbff 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS12440 133bfd27fd35089d653766d89397bbff 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 2.5E-65 T 23-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VV93_RS12440 133bfd27fd35089d653766d89397bbff 865 SUPERFAMILY SSF52016 162 372 4.12E-71 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VV93_RS12440 133bfd27fd35089d653766d89397bbff 865 PANTHER PTHR11670:SF39 305 860 0.0 T 23-04-2016 VV93_RS12440 133bfd27fd35089d653766d89397bbff 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 2.8E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS04735 d30b5e63466b9387ab959d99e70fe8c6 92 Pfam PF10262 Rdx family 5 78 2.3E-33 T 23-04-2016 IPR011893 Selenoprotein, Rdx type VV93_RS04735 d30b5e63466b9387ab959d99e70fe8c6 92 Gene3D G3DSA:3.40.30.10 3 92 3.5E-44 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS04735 d30b5e63466b9387ab959d99e70fe8c6 92 PANTHER PTHR36417 1 91 1.0E-48 T 23-04-2016 VV93_RS04735 d30b5e63466b9387ab959d99e70fe8c6 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 78 7.3E-24 T 23-04-2016 IPR011893 Selenoprotein, Rdx type VV93_RS04735 d30b5e63466b9387ab959d99e70fe8c6 92 PANTHER PTHR36417:SF1 1 91 1.0E-48 T 23-04-2016 VV93_RS04735 d30b5e63466b9387ab959d99e70fe8c6 92 SUPERFAMILY SSF52833 4 87 3.35E-30 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS13920 22d8e0e040d6e3f97273b0fda12770a9 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.3E-19 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS13920 22d8e0e040d6e3f97273b0fda12770a9 335 PANTHER PTHR30146 1 332 5.1E-147 T 23-04-2016 VV93_RS13920 22d8e0e040d6e3f97273b0fda12770a9 335 Gene3D G3DSA:3.40.50.2300 58 167 9.6E-33 T 23-04-2016 VV93_RS13920 22d8e0e040d6e3f97273b0fda12770a9 335 Gene3D G3DSA:1.10.260.40 1 57 3.1E-24 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS13920 22d8e0e040d6e3f97273b0fda12770a9 335 SUPERFAMILY SSF53822 60 332 3.53E-88 T 23-04-2016 IPR028082 Periplasmic binding protein-like I VV93_RS13920 22d8e0e040d6e3f97273b0fda12770a9 335 Gene3D G3DSA:3.40.50.2300 168 330 8.1E-63 T 23-04-2016 VV93_RS13920 22d8e0e040d6e3f97273b0fda12770a9 335 PANTHER PTHR30146:SF4 1 332 5.1E-147 T 23-04-2016 VV93_RS13920 22d8e0e040d6e3f97273b0fda12770a9 335 SMART SM00354 1 71 8.8E-33 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS13920 22d8e0e040d6e3f97273b0fda12770a9 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS13920 22d8e0e040d6e3f97273b0fda12770a9 335 SUPERFAMILY SSF47413 1 59 2.44E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS13920 22d8e0e040d6e3f97273b0fda12770a9 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 1.6E-40 T 23-04-2016 VV93_RS01475 5c0ad045d11075d748c09386cfc4b9b8 269 PANTHER PTHR22993:SF15 1 268 5.2E-127 T 23-04-2016 VV93_RS01475 5c0ad045d11075d748c09386cfc4b9b8 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 3.6E-25 T 23-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VV93_RS01475 5c0ad045d11075d748c09386cfc4b9b8 269 Gene3D G3DSA:3.20.190.10 2 129 1.6E-35 T 23-04-2016 VV93_RS01475 5c0ad045d11075d748c09386cfc4b9b8 269 SMART SM00898 2 115 6.6E-52 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VV93_RS01475 5c0ad045d11075d748c09386cfc4b9b8 269 SUPERFAMILY SSF46946 130 221 9.13E-29 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VV93_RS01475 5c0ad045d11075d748c09386cfc4b9b8 269 SMART SM01232 129 221 7.4E-45 T 23-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VV93_RS01475 5c0ad045d11075d748c09386cfc4b9b8 269 SUPERFAMILY SSF81624 2 134 7.72E-39 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VV93_RS01475 5c0ad045d11075d748c09386cfc4b9b8 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 268 1.6E-7 T 23-04-2016 IPR010663 Zinc finger, FPG/IleRS-type VV93_RS01475 5c0ad045d11075d748c09386cfc4b9b8 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 42.521 T 23-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VV93_RS01475 5c0ad045d11075d748c09386cfc4b9b8 269 Gene3D G3DSA:1.10.8.50 130 268 3.8E-50 T 23-04-2016 VV93_RS01475 5c0ad045d11075d748c09386cfc4b9b8 269 PANTHER PTHR22993 1 268 5.2E-127 T 23-04-2016 VV93_RS01475 5c0ad045d11075d748c09386cfc4b9b8 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 4.0E-30 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VV93_RS01475 5c0ad045d11075d748c09386cfc4b9b8 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 23-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 VV93_RS01475 5c0ad045d11075d748c09386cfc4b9b8 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 4.4E-94 T 23-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VV93_RS01475 5c0ad045d11075d748c09386cfc4b9b8 269 SUPERFAMILY SSF57716 217 268 3.71E-16 T 23-04-2016 VV93_RS03540 ef5c99e1b5c774d74c502485c47f75ef 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 2.8E-59 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VV93_RS03540 ef5c99e1b5c774d74c502485c47f75ef 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 2.8E-59 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VV93_RS03540 ef5c99e1b5c774d74c502485c47f75ef 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 2.8E-59 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VV93_RS03540 ef5c99e1b5c774d74c502485c47f75ef 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 2.8E-59 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VV93_RS03540 ef5c99e1b5c774d74c502485c47f75ef 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.8E-59 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VV93_RS03540 ef5c99e1b5c774d74c502485c47f75ef 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 2.8E-59 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VV93_RS03540 ef5c99e1b5c774d74c502485c47f75ef 267 PANTHER PTHR20854:SF4 1 263 7.5E-104 T 23-04-2016 VV93_RS03540 ef5c99e1b5c774d74c502485c47f75ef 267 PANTHER PTHR20854 1 263 7.5E-104 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VV93_RS03540 ef5c99e1b5c774d74c502485c47f75ef 267 Gene3D G3DSA:3.40.190.80 152 259 2.1E-38 T 23-04-2016 VV93_RS03540 ef5c99e1b5c774d74c502485c47f75ef 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 23-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 VV93_RS03540 ef5c99e1b5c774d74c502485c47f75ef 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 2.2E-33 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VV93_RS03540 ef5c99e1b5c774d74c502485c47f75ef 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 2.2E-33 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VV93_RS03540 ef5c99e1b5c774d74c502485c47f75ef 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 2.2E-33 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VV93_RS03540 ef5c99e1b5c774d74c502485c47f75ef 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 2.2E-33 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VV93_RS03540 ef5c99e1b5c774d74c502485c47f75ef 267 Pfam PF00459 Inositol monophosphatase family 2 258 3.9E-70 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VV93_RS03540 ef5c99e1b5c774d74c502485c47f75ef 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 23-04-2016 IPR020583 Inositol monophosphatase, metal-binding site VV93_RS03540 ef5c99e1b5c774d74c502485c47f75ef 267 SUPERFAMILY SSF56655 1 259 6.68E-85 T 23-04-2016 VV93_RS03540 ef5c99e1b5c774d74c502485c47f75ef 267 Gene3D G3DSA:3.30.540.10 2 151 1.2E-52 T 23-04-2016 VV93_RS15375 2761308d1823e155e0b12538d59559ac 245 SUPERFAMILY SSF52540 1 238 7.45E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15375 2761308d1823e155e0b12538d59559ac 245 SMART SM00382 26 216 4.5E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS15375 2761308d1823e155e0b12538d59559ac 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS15375 2761308d1823e155e0b12538d59559ac 245 PANTHER PTHR24220:SF327 3 242 3.8E-130 T 23-04-2016 VV93_RS15375 2761308d1823e155e0b12538d59559ac 245 PANTHER PTHR24220 3 242 3.8E-130 T 23-04-2016 VV93_RS15375 2761308d1823e155e0b12538d59559ac 245 Pfam PF00005 ABC transporter 17 168 5.2E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS15375 2761308d1823e155e0b12538d59559ac 245 Gene3D G3DSA:3.40.50.300 1 239 2.8E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15375 2761308d1823e155e0b12538d59559ac 245 PIRSF PIRSF039085 1 244 4.5E-107 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VV93_RS12885 fdc2f4e9157abe34225394b9d3aa9b68 535 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 6.3E-15 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VV93_RS12885 fdc2f4e9157abe34225394b9d3aa9b68 535 Pfam PF00890 FAD binding domain 10 392 9.3E-103 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VV93_RS12885 fdc2f4e9157abe34225394b9d3aa9b68 535 Gene3D G3DSA:3.50.50.60 3 243 2.6E-105 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS12885 fdc2f4e9157abe34225394b9d3aa9b68 535 Gene3D G3DSA:3.50.50.60 349 412 2.6E-105 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS12885 fdc2f4e9157abe34225394b9d3aa9b68 535 SUPERFAMILY SSF51905 5 255 2.97E-77 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS12885 fdc2f4e9157abe34225394b9d3aa9b68 535 SUPERFAMILY SSF51905 356 447 2.97E-77 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS12885 fdc2f4e9157abe34225394b9d3aa9b68 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.0E-8 T 23-04-2016 VV93_RS12885 fdc2f4e9157abe34225394b9d3aa9b68 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.0E-8 T 23-04-2016 VV93_RS12885 fdc2f4e9157abe34225394b9d3aa9b68 535 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 7.8E-213 T 23-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VV93_RS12885 fdc2f4e9157abe34225394b9d3aa9b68 535 SUPERFAMILY SSF46977 426 525 3.4E-32 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VV93_RS12885 fdc2f4e9157abe34225394b9d3aa9b68 535 SUPERFAMILY SSF56425 238 353 5.83E-42 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VV93_RS12885 fdc2f4e9157abe34225394b9d3aa9b68 535 Gene3D G3DSA:1.20.58.100 419 522 7.4E-35 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VV93_RS12885 fdc2f4e9157abe34225394b9d3aa9b68 535 PANTHER PTHR11632 5 535 1.6E-271 T 23-04-2016 VV93_RS12885 fdc2f4e9157abe34225394b9d3aa9b68 535 PANTHER PTHR11632:SF27 5 535 1.6E-271 T 23-04-2016 VV93_RS12885 fdc2f4e9157abe34225394b9d3aa9b68 535 Gene3D G3DSA:3.90.700.10 244 348 2.5E-38 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VV93_RS10835 24d2a7f91706a151f819c608ceb51571 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 5.1E-273 T 23-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 VV93_RS10835 24d2a7f91706a151f819c608ceb51571 435 SUPERFAMILY SSF53901 14 293 3.26E-60 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS10835 24d2a7f91706a151f819c608ceb51571 435 Gene3D G3DSA:3.40.47.10 220 299 3.7E-53 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS10835 24d2a7f91706a151f819c608ceb51571 435 Gene3D G3DSA:3.40.47.10 14 133 3.7E-53 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS10835 24d2a7f91706a151f819c608ceb51571 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 1.4E-61 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 VV93_RS10835 24d2a7f91706a151f819c608ceb51571 435 PANTHER PTHR18919 9 435 2.3E-185 T 23-04-2016 VV93_RS10835 24d2a7f91706a151f819c608ceb51571 435 PIRSF PIRSF000429 8 435 1.0E-118 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 VV93_RS10835 24d2a7f91706a151f819c608ceb51571 435 SUPERFAMILY SSF53901 296 434 5.52E-30 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS10835 24d2a7f91706a151f819c608ceb51571 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 65.753 T 23-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 VV93_RS10835 24d2a7f91706a151f819c608ceb51571 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 3.9E-35 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 VV93_RS10835 24d2a7f91706a151f819c608ceb51571 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 8.3E-126 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 VV93_RS10835 24d2a7f91706a151f819c608ceb51571 435 PANTHER PTHR18919:SF5 9 435 2.3E-185 T 23-04-2016 VV93_RS10835 24d2a7f91706a151f819c608ceb51571 435 Gene3D G3DSA:3.40.47.10 303 435 2.3E-45 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS10835 24d2a7f91706a151f819c608ceb51571 435 Gene3D G3DSA:3.40.47.10 174 219 2.3E-45 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS10835 24d2a7f91706a151f819c608ceb51571 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 VV93_RS10120 265e3d999a3375efa465c5ba3f612a62 245 PANTHER PTHR10108:SF809 8 244 3.8E-114 T 23-04-2016 VV93_RS10120 265e3d999a3375efa465c5ba3f612a62 245 PIRSF PIRSF006325 4 245 1.8E-124 T 23-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 VV93_RS10120 265e3d999a3375efa465c5ba3f612a62 245 PANTHER PTHR10108 8 244 3.8E-114 T 23-04-2016 VV93_RS10120 265e3d999a3375efa465c5ba3f612a62 245 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 6 245 43.051 T 23-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 VV93_RS10120 265e3d999a3375efa465c5ba3f612a62 245 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 8 245 4.2E-117 T 23-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 VV93_RS10120 265e3d999a3375efa465c5ba3f612a62 245 Pfam PF13649 Methyltransferase domain 63 161 1.3E-12 T 23-04-2016 VV93_RS10120 265e3d999a3375efa465c5ba3f612a62 245 SUPERFAMILY SSF53335 23 245 5.42E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS10120 265e3d999a3375efa465c5ba3f612a62 245 Gene3D G3DSA:3.40.50.150 22 244 1.4E-63 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS04250 28ff71caa92138c7dbd70498db5a05b4 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 23-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 VV93_RS04250 28ff71caa92138c7dbd70498db5a05b4 373 PANTHER PTHR30474:SF1 1 371 3.9E-176 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 VV93_RS04250 28ff71caa92138c7dbd70498db5a05b4 373 Pfam PF01098 Cell cycle protein 23 367 9.1E-114 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VV93_RS04250 28ff71caa92138c7dbd70498db5a05b4 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 1.2E-135 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 VV93_RS04250 28ff71caa92138c7dbd70498db5a05b4 373 PANTHER PTHR30474 1 371 3.9E-176 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VV93_RS01190 46826afa0d724fe4d665844e9c9caf13 405 SUPERFAMILY SSF48452 213 386 8.1E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS01190 46826afa0d724fe4d665844e9c9caf13 405 Gene3D G3DSA:1.25.40.10 306 387 2.4E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS01190 46826afa0d724fe4d665844e9c9caf13 405 SMART SM00028 72 105 26.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS01190 46826afa0d724fe4d665844e9c9caf13 405 SMART SM00028 149 182 0.72 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS01190 46826afa0d724fe4d665844e9c9caf13 405 SMART SM00028 292 322 89.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS01190 46826afa0d724fe4d665844e9c9caf13 405 SMART SM00028 358 391 190.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS01190 46826afa0d724fe4d665844e9c9caf13 405 SUPERFAMILY SSF48452 72 247 1.25E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS01190 46826afa0d724fe4d665844e9c9caf13 405 Gene3D G3DSA:1.25.40.10 45 305 4.5E-23 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS01190 46826afa0d724fe4d665844e9c9caf13 405 Pfam PF13181 Tetratricopeptide repeat 149 180 0.025 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS06350 15d19b8dab6b2f90e1233bd6ee2d6a3c 983 SUPERFAMILY SSF46785 915 980 3.95E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS06350 15d19b8dab6b2f90e1233bd6ee2d6a3c 983 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 199 7.2E-42 T 23-04-2016 IPR025199 DNA translocase FtsK, 4TM region VV93_RS06350 15d19b8dab6b2f90e1233bd6ee2d6a3c 983 PANTHER PTHR22683 29 978 0.0 T 23-04-2016 VV93_RS06350 15d19b8dab6b2f90e1233bd6ee2d6a3c 983 Pfam PF09397 Ftsk gamma domain 917 977 1.0E-25 T 23-04-2016 IPR018541 FtsK gamma domain VV93_RS06350 15d19b8dab6b2f90e1233bd6ee2d6a3c 983 PANTHER PTHR22683:SF41 29 978 0.0 T 23-04-2016 VV93_RS06350 15d19b8dab6b2f90e1233bd6ee2d6a3c 983 SMART SM00843 915 980 2.2E-38 T 23-04-2016 IPR018541 FtsK gamma domain VV93_RS06350 15d19b8dab6b2f90e1233bd6ee2d6a3c 983 Pfam PF01580 FtsK/SpoIIIE family 598 811 1.2E-71 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 VV93_RS06350 15d19b8dab6b2f90e1233bd6ee2d6a3c 983 SUPERFAMILY SSF52540 572 884 2.52E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06350 15d19b8dab6b2f90e1233bd6ee2d6a3c 983 Gene3D G3DSA:3.40.50.300 572 878 2.0E-92 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12325 94b94b28398eea24f948bc1157338087 431 PANTHER PTHR11986 1 431 1.0E-236 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV93_RS12325 94b94b28398eea24f948bc1157338087 431 Gene3D G3DSA:3.40.640.10 71 316 3.4E-82 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS12325 94b94b28398eea24f948bc1157338087 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV93_RS12325 94b94b28398eea24f948bc1157338087 431 PANTHER PTHR11986:SF5 1 431 1.0E-236 T 23-04-2016 VV93_RS12325 94b94b28398eea24f948bc1157338087 431 SUPERFAMILY SSF53383 1 423 2.3E-133 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS12325 94b94b28398eea24f948bc1157338087 431 Pfam PF00202 Aminotransferase class-III 33 395 2.3E-75 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV93_RS12325 94b94b28398eea24f948bc1157338087 431 Gene3D G3DSA:3.90.1150.10 319 424 8.7E-44 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS12325 94b94b28398eea24f948bc1157338087 431 Gene3D G3DSA:3.90.1150.10 2 69 8.7E-44 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS12325 94b94b28398eea24f948bc1157338087 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.172 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 VV93_RS12325 94b94b28398eea24f948bc1157338087 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 3.8E-193 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 VV93_RS10220 f1cb43bc71d87affdaac1f08c4aa9f5c 102 Pfam PF09413 Putative prokaryotic signal transducing protein 2 68 5.5E-6 T 23-04-2016 IPR018551 Domain of unknown function DUF2007 VV93_RS15035 2ac3dd397ec0e526c49277c536abad3e 185 PANTHER PTHR17490 3 180 5.5E-97 T 23-04-2016 VV93_RS15035 2ac3dd397ec0e526c49277c536abad3e 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 3 185 1.6E-44 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 VV93_RS15035 2ac3dd397ec0e526c49277c536abad3e 185 Pfam PF01300 Telomere recombination 10 185 3.7E-50 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 VV93_RS15035 2ac3dd397ec0e526c49277c536abad3e 185 Gene3D G3DSA:3.90.870.10 3 185 5.6E-61 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VV93_RS15035 2ac3dd397ec0e526c49277c536abad3e 185 SUPERFAMILY SSF55821 2 181 4.58E-58 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VV93_RS15035 2ac3dd397ec0e526c49277c536abad3e 185 PANTHER PTHR17490:SF8 3 180 5.5E-97 T 23-04-2016 VV93_RS15035 2ac3dd397ec0e526c49277c536abad3e 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 39.798 T 23-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 VV93_RS11075 a6211bb39447c2041f940dc1542880cf 142 Pfam PF03646 FlaG protein 40 141 2.0E-24 T 23-04-2016 IPR005186 FlaG protein VV93_RS11075 a6211bb39447c2041f940dc1542880cf 142 PANTHER PTHR37166 42 142 9.6E-20 T 23-04-2016 VV93_RS11075 a6211bb39447c2041f940dc1542880cf 142 Gene3D G3DSA:3.30.160.170 43 138 3.3E-24 T 23-04-2016 IPR005186 FlaG protein VV93_RS11075 a6211bb39447c2041f940dc1542880cf 142 PANTHER PTHR37166:SF1 42 142 9.6E-20 T 23-04-2016 VV93_RS11075 a6211bb39447c2041f940dc1542880cf 142 SUPERFAMILY SSF160214 44 141 8.5E-23 T 23-04-2016 IPR005186 FlaG protein VV93_RS09415 0d06911f6c69f483e9111e1a34bdba69 466 Gene3D G3DSA:2.40.50.140 15 103 3.5E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS09415 0d06911f6c69f483e9111e1a34bdba69 466 Gene3D G3DSA:3.30.930.10 109 462 8.0E-112 T 23-04-2016 VV93_RS09415 0d06911f6c69f483e9111e1a34bdba69 466 SUPERFAMILY SSF50249 15 101 6.0E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS09415 0d06911f6c69f483e9111e1a34bdba69 466 SUPERFAMILY SSF55681 97 464 1.99E-94 T 23-04-2016 VV93_RS09415 0d06911f6c69f483e9111e1a34bdba69 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 2.7E-14 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS09415 0d06911f6c69f483e9111e1a34bdba69 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 2.7E-14 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS09415 0d06911f6c69f483e9111e1a34bdba69 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 2.7E-14 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS09415 0d06911f6c69f483e9111e1a34bdba69 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 2.7E-14 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS09415 0d06911f6c69f483e9111e1a34bdba69 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 1.5E-80 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS09415 0d06911f6c69f483e9111e1a34bdba69 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 7.8E-206 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VV93_RS09415 0d06911f6c69f483e9111e1a34bdba69 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 1.7E-10 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VV93_RS09415 0d06911f6c69f483e9111e1a34bdba69 466 PANTHER PTHR22594:SF6 6 180 5.9E-250 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VV93_RS09415 0d06911f6c69f483e9111e1a34bdba69 466 PANTHER PTHR22594:SF6 199 465 5.9E-250 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VV93_RS09415 0d06911f6c69f483e9111e1a34bdba69 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.781 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VV93_RS09415 0d06911f6c69f483e9111e1a34bdba69 466 PANTHER PTHR22594 6 180 5.9E-250 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS09415 0d06911f6c69f483e9111e1a34bdba69 466 PANTHER PTHR22594 199 465 5.9E-250 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS14185 8c87fcbb46297324807964cab455676b 438 Gene3D G3DSA:3.90.170.10 267 431 2.1E-64 T 23-04-2016 VV93_RS14185 8c87fcbb46297324807964cab455676b 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 23-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 VV93_RS14185 8c87fcbb46297324807964cab455676b 438 Gene3D G3DSA:1.10.300.10 103 195 2.5E-38 T 23-04-2016 VV93_RS14185 8c87fcbb46297324807964cab455676b 438 SUPERFAMILY SSF52540 3 436 9.14E-180 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14185 8c87fcbb46297324807964cab455676b 438 Gene3D G3DSA:3.40.440.10 196 266 1.8E-71 T 23-04-2016 VV93_RS14185 8c87fcbb46297324807964cab455676b 438 Gene3D G3DSA:3.40.440.10 3 94 1.8E-71 T 23-04-2016 VV93_RS14185 8c87fcbb46297324807964cab455676b 438 PANTHER PTHR11846 3 435 3.0E-258 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VV93_RS14185 8c87fcbb46297324807964cab455676b 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 218.847 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VV93_RS14185 8c87fcbb46297324807964cab455676b 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 1.1E-192 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VV93_RS14185 8c87fcbb46297324807964cab455676b 438 SMART SM00788 4 431 0.0 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VV93_RS14185 8c87fcbb46297324807964cab455676b 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 2.5E-176 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VV93_RS14185 8c87fcbb46297324807964cab455676b 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 23-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 Gene3D G3DSA:3.40.1360.10 247 373 2.4E-45 T 23-04-2016 VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 Gene3D G3DSA:3.90.580.10 2 101 1.9E-42 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 PANTHER PTHR30313 3 583 1.1E-168 T 23-04-2016 VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 Hamap MF_00974 DNA primase [dnaG]. 4 583 29.616 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 PIRSF PIRSF002811 2 586 4.9E-144 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 Pfam PF13155 Toprim-like 269 356 1.6E-14 T 23-04-2016 VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 TIGRFAM TIGR01391 dnaG: DNA primase 5 422 3.0E-147 T 23-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 SMART SM00400 36 90 2.1E-36 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 SUPERFAMILY SSF56731 121 433 3.75E-113 T 23-04-2016 VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 Pfam PF08275 DNA primase catalytic core, N-terminal domain 132 256 1.5E-41 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 Pfam PF08278 DNA primase DnaG DnaB-binding 458 581 6.6E-35 T 23-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 Gene3D G3DSA:1.10.860.10 443 586 3.7E-51 T 23-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 SMART SM00493 265 336 5.6E-19 T 23-04-2016 IPR006171 Toprim domain VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 SUPERFAMILY SSF57783 4 101 4.76E-38 T 23-04-2016 VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 Gene3D G3DSA:3.90.980.10 121 246 1.1E-45 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 SUPERFAMILY SSF117023 454 585 4.71E-43 T 23-04-2016 VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 Gene3D G3DSA:1.20.50.20 374 431 1.6E-23 T 23-04-2016 VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 SMART SM00766 457 582 1.7E-53 T 23-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 Pfam PF01807 CHC2 zinc finger 6 101 2.4E-41 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VV93_RS02575 a41a7d55db1aaa1c1b3264acdaf6fa41 587 Pfam PF10410 DnaB-helicase binding domain of primase 375 427 1.4E-9 T 23-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 VV93_RS07030 d3e3d79824f8bdf17f46182d8669b6ce 781 Gene3D G3DSA:3.40.50.300 8 150 2.2E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07030 d3e3d79824f8bdf17f46182d8669b6ce 781 SMART SM00847 372 460 0.0079 T 23-04-2016 IPR007502 Helicase-associated domain GO:0004386 VV93_RS07030 d3e3d79824f8bdf17f46182d8669b6ce 781 Gene3D G3DSA:3.40.50.300 191 326 8.4E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07030 d3e3d79824f8bdf17f46182d8669b6ce 781 Pfam PF00271 Helicase conserved C-terminal domain 195 314 7.3E-14 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS07030 d3e3d79824f8bdf17f46182d8669b6ce 781 SUPERFAMILY SSF52540 18 326 6.46E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07030 d3e3d79824f8bdf17f46182d8669b6ce 781 SMART SM00490 219 315 2.7E-14 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS07030 d3e3d79824f8bdf17f46182d8669b6ce 781 SMART SM00487 1 174 1.8E-13 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV93_RS07030 d3e3d79824f8bdf17f46182d8669b6ce 781 Pfam PF00270 DEAD/DEAH box helicase 13 153 1.2E-8 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV93_RS07030 d3e3d79824f8bdf17f46182d8669b6ce 781 Pfam PF04408 Helicase associated domain (HA2) 373 433 7.8E-5 T 23-04-2016 IPR007502 Helicase-associated domain GO:0004386 VV93_RS07030 d3e3d79824f8bdf17f46182d8669b6ce 781 PANTHER PTHR18934 22 402 1.6E-94 T 23-04-2016 VV93_RS09400 f5ace4cee823664a43695ab06241ef76 155 SUPERFAMILY SSF55729 1 140 8.47E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS09400 f5ace4cee823664a43695ab06241ef76 155 Pfam PF13673 Acetyltransferase (GNAT) domain 29 139 1.6E-7 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS09400 f5ace4cee823664a43695ab06241ef76 155 Gene3D G3DSA:3.40.630.30 1 139 1.6E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS04835 432ae79c5add3c7b6aa72c6cb024d192 255 SUPERFAMILY SSF53474 5 253 2.13E-53 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS04835 432ae79c5add3c7b6aa72c6cb024d192 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 2.2E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VV93_RS04835 432ae79c5add3c7b6aa72c6cb024d192 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 2.2E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VV93_RS04835 432ae79c5add3c7b6aa72c6cb024d192 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 2.2E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VV93_RS04835 432ae79c5add3c7b6aa72c6cb024d192 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 2.2E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VV93_RS04835 432ae79c5add3c7b6aa72c6cb024d192 255 PANTHER PTHR10992:SF768 5 255 1.3E-81 T 23-04-2016 VV93_RS04835 432ae79c5add3c7b6aa72c6cb024d192 255 PANTHER PTHR10992 5 255 1.3E-81 T 23-04-2016 VV93_RS04835 432ae79c5add3c7b6aa72c6cb024d192 255 Gene3D G3DSA:3.40.50.1820 5 254 2.3E-52 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS04835 432ae79c5add3c7b6aa72c6cb024d192 255 PRINTS PR00412 Epoxide hydrolase signature 82 95 3.5E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VV93_RS04835 432ae79c5add3c7b6aa72c6cb024d192 255 PRINTS PR00412 Epoxide hydrolase signature 96 109 3.5E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VV93_RS04835 432ae79c5add3c7b6aa72c6cb024d192 255 PRINTS PR00412 Epoxide hydrolase signature 230 252 3.5E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VV93_RS04835 432ae79c5add3c7b6aa72c6cb024d192 255 PRINTS PR00412 Epoxide hydrolase signature 39 54 3.5E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VV93_RS04835 432ae79c5add3c7b6aa72c6cb024d192 255 Pfam PF12697 Alpha/beta hydrolase family 16 247 1.3E-24 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VV93_RS01085 bd6637d1419c2d268abd4757371edd3e 233 SUPERFAMILY SSF54523 48 211 3.22E-56 T 23-04-2016 VV93_RS01085 bd6637d1419c2d268abd4757371edd3e 233 Pfam PF13633 Prokaryotic N-terminal methylation site 14 40 3.0E-12 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS01085 bd6637d1419c2d268abd4757371edd3e 233 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 37 3.0E-9 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS01085 bd6637d1419c2d268abd4757371edd3e 233 Gene3D G3DSA:2.10.70.20 161 209 2.1E-21 T 23-04-2016 VV93_RS01085 bd6637d1419c2d268abd4757371edd3e 233 Gene3D G3DSA:3.10.610.10 46 158 1.2E-47 T 23-04-2016 VV93_RS01085 bd6637d1419c2d268abd4757371edd3e 233 Pfam PF11612 Type II secretion system (T2SS), protein J 67 203 1.5E-39 T 23-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VV93_RS01085 bd6637d1419c2d268abd4757371edd3e 233 PANTHER PTHR39583 7 232 1.8E-56 T 23-04-2016 VV93_RS01085 bd6637d1419c2d268abd4757371edd3e 233 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 15 206 8.3E-82 T 23-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VV93_RS01085 bd6637d1419c2d268abd4757371edd3e 233 PANTHER PTHR39583:SF1 7 232 1.8E-56 T 23-04-2016 VV93_RS01085 bd6637d1419c2d268abd4757371edd3e 233 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS02895 f1801618b33d94ff143ea1134b44ddc5 281 PANTHER PTHR30126 1 281 6.5E-44 T 23-04-2016 VV93_RS02895 f1801618b33d94ff143ea1134b44ddc5 281 SUPERFAMILY SSF46785 3 77 2.72E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS02895 f1801618b33d94ff143ea1134b44ddc5 281 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.5E-14 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS02895 f1801618b33d94ff143ea1134b44ddc5 281 Gene3D G3DSA:1.10.10.10 3 77 2.5E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS02895 f1801618b33d94ff143ea1134b44ddc5 281 Pfam PF03466 LysR substrate binding domain 90 276 1.0E-12 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS02895 f1801618b33d94ff143ea1134b44ddc5 281 PANTHER PTHR30126:SF11 1 281 6.5E-44 T 23-04-2016 VV93_RS02895 f1801618b33d94ff143ea1134b44ddc5 281 Gene3D G3DSA:3.40.190.10 91 167 1.0E-4 T 23-04-2016 VV93_RS02895 f1801618b33d94ff143ea1134b44ddc5 281 SUPERFAMILY SSF53850 90 279 9.59E-18 T 23-04-2016 VV93_RS11045 dec762cf55b86d71af780a4ec6a6832b 471 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV93_RS11045 dec762cf55b86d71af780a4ec6a6832b 471 PANTHER PTHR32071 1 470 6.5E-264 T 23-04-2016 VV93_RS11045 dec762cf55b86d71af780a4ec6a6832b 471 Gene3D G3DSA:3.40.50.300 128 299 5.5E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11045 dec762cf55b86d71af780a4ec6a6832b 471 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VV93_RS11045 dec762cf55b86d71af780a4ec6a6832b 471 SUPERFAMILY SSF46689 412 462 6.27E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS11045 dec762cf55b86d71af780a4ec6a6832b 471 SUPERFAMILY SSF46689 342 385 6.27E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS11045 dec762cf55b86d71af780a4ec6a6832b 471 Gene3D G3DSA:3.40.50.2300 3 120 1.5E-35 T 23-04-2016 VV93_RS11045 dec762cf55b86d71af780a4ec6a6832b 471 Gene3D G3DSA:1.10.10.60 417 461 5.2E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS11045 dec762cf55b86d71af780a4ec6a6832b 471 SUPERFAMILY SSF52540 135 370 4.83E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11045 dec762cf55b86d71af780a4ec6a6832b 471 Pfam PF00072 Response regulator receiver domain 6 115 1.3E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS11045 dec762cf55b86d71af780a4ec6a6832b 471 SMART SM00382 149 296 2.0E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS11045 dec762cf55b86d71af780a4ec6a6832b 471 Pfam PF00158 Sigma-54 interaction domain 134 295 5.9E-65 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV93_RS11045 dec762cf55b86d71af780a4ec6a6832b 471 SUPERFAMILY SSF52172 3 173 5.55E-40 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS11045 dec762cf55b86d71af780a4ec6a6832b 471 Gene3D G3DSA:1.10.8.60 302 371 2.0E-25 T 23-04-2016 VV93_RS11045 dec762cf55b86d71af780a4ec6a6832b 471 Pfam PF02954 Bacterial regulatory protein, Fis family 422 461 3.3E-12 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS11045 dec762cf55b86d71af780a4ec6a6832b 471 PANTHER PTHR32071:SF21 1 470 6.5E-264 T 23-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 VV93_RS11045 dec762cf55b86d71af780a4ec6a6832b 471 SMART SM00448 4 115 3.6E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS07870 dbb1edfbfad41304f2d448b1697feecd 93 SUPERFAMILY SSF50249 1 86 4.28E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS07870 dbb1edfbfad41304f2d448b1697feecd 93 Gene3D G3DSA:2.40.50.140 1 87 1.9E-37 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS07870 dbb1edfbfad41304f2d448b1697feecd 93 ProDom PD015272 DNA DNA-BINDING SINGLE-STRANDED PHAGE-RELATED HELIX-DESTABILIZING REPLICATION BINDING GPV 3D-STRUCTURE DIRECT 1 85 3.0E-29 T 23-04-2016 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 VV93_RS07870 dbb1edfbfad41304f2d448b1697feecd 93 Pfam PF02303 Helix-destabilising protein 2 84 3.0E-29 T 23-04-2016 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 VV93_RS05065 57fcccacb37550d8e65aaa8c72af2600 418 SUPERFAMILY SSF47384 205 284 3.92E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS05065 57fcccacb37550d8e65aaa8c72af2600 418 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 284 2.0E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS05065 57fcccacb37550d8e65aaa8c72af2600 418 PANTHER PTHR24423 162 399 7.7E-25 T 23-04-2016 VV93_RS05065 57fcccacb37550d8e65aaa8c72af2600 418 PANTHER PTHR24423 125 135 7.7E-25 T 23-04-2016 VV93_RS05065 57fcccacb37550d8e65aaa8c72af2600 418 Gene3D G3DSA:3.30.565.10 292 358 1.5E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS05065 57fcccacb37550d8e65aaa8c72af2600 418 PANTHER PTHR24423:SF474 162 399 7.7E-25 T 23-04-2016 VV93_RS05065 57fcccacb37550d8e65aaa8c72af2600 418 PANTHER PTHR24423:SF474 125 135 7.7E-25 T 23-04-2016 VV93_RS05065 57fcccacb37550d8e65aaa8c72af2600 418 SUPERFAMILY SSF55874 286 407 1.28E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS05065 57fcccacb37550d8e65aaa8c72af2600 418 Gene3D G3DSA:1.10.287.130 220 280 9.9E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS05065 57fcccacb37550d8e65aaa8c72af2600 418 SMART SM00388 220 286 8.5E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS05690 b17942d634a61f27accd8ca9310dc0a3 211 PIRSF PIRSF006091 1 205 4.6E-78 T 23-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VV93_RS05690 b17942d634a61f27accd8ca9310dc0a3 211 PANTHER PTHR36118 1 211 2.3E-71 T 23-04-2016 VV93_RS05690 b17942d634a61f27accd8ca9310dc0a3 211 Pfam PF04205 FMN-binding domain 100 189 2.7E-18 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VV93_RS05690 b17942d634a61f27accd8ca9310dc0a3 211 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 3.7E-64 T 23-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VV93_RS05690 b17942d634a61f27accd8ca9310dc0a3 211 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 194 27.285 T 23-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VV93_RS05690 b17942d634a61f27accd8ca9310dc0a3 211 SMART SM00900 100 192 2.4E-33 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VV93_RS05690 b17942d634a61f27accd8ca9310dc0a3 211 PANTHER PTHR36118:SF1 1 211 2.3E-71 T 23-04-2016 VV93_RS04920 ad41c838ca80040989c4f0af07907ca5 290 Gene3D G3DSA:3.40.50.720 2 118 6.0E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS04920 ad41c838ca80040989c4f0af07907ca5 290 Pfam PF00549 CoA-ligase 151 270 1.7E-21 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VV93_RS04920 ad41c838ca80040989c4f0af07907ca5 290 PIRSF PIRSF001553 1 289 4.1E-135 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VV93_RS04920 ad41c838ca80040989c4f0af07907ca5 290 Gene3D G3DSA:3.40.50.261 119 287 7.9E-79 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VV93_RS04920 ad41c838ca80040989c4f0af07907ca5 290 SMART SM00881 4 100 3.3E-36 T 23-04-2016 IPR003781 CoA-binding GO:0048037 VV93_RS04920 ad41c838ca80040989c4f0af07907ca5 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 23-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site VV93_RS04920 ad41c838ca80040989c4f0af07907ca5 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 9.9E-147 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VV93_RS04920 ad41c838ca80040989c4f0af07907ca5 290 PANTHER PTHR11117 1 287 1.7E-199 T 23-04-2016 VV93_RS04920 ad41c838ca80040989c4f0af07907ca5 290 SUPERFAMILY SSF52210 123 286 2.88E-56 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VV93_RS04920 ad41c838ca80040989c4f0af07907ca5 290 Pfam PF02629 CoA binding domain 6 99 2.1E-31 T 23-04-2016 IPR003781 CoA-binding GO:0048037 VV93_RS04920 ad41c838ca80040989c4f0af07907ca5 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.8E-40 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VV93_RS04920 ad41c838ca80040989c4f0af07907ca5 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.8E-40 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VV93_RS04920 ad41c838ca80040989c4f0af07907ca5 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.8E-40 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VV93_RS04920 ad41c838ca80040989c4f0af07907ca5 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.8E-40 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VV93_RS04920 ad41c838ca80040989c4f0af07907ca5 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VV93_RS04920 ad41c838ca80040989c4f0af07907ca5 290 SUPERFAMILY SSF51735 1 122 2.89E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS07130 b8cae31c463ce8452aa2d97de650fe19 402 SUPERFAMILY SSF103473 6 389 2.09E-53 T 23-04-2016 IPR020846 Major facilitator superfamily domain VV93_RS07130 b8cae31c463ce8452aa2d97de650fe19 402 PANTHER PTHR23501:SF11 1 388 1.1E-133 T 23-04-2016 VV93_RS07130 b8cae31c463ce8452aa2d97de650fe19 402 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VV93_RS07130 b8cae31c463ce8452aa2d97de650fe19 402 PANTHER PTHR23501 1 388 1.1E-133 T 23-04-2016 VV93_RS07130 b8cae31c463ce8452aa2d97de650fe19 402 Gene3D G3DSA:1.20.1250.20 14 191 1.3E-27 T 23-04-2016 VV93_RS07130 b8cae31c463ce8452aa2d97de650fe19 402 Gene3D G3DSA:1.20.1250.20 211 390 4.3E-9 T 23-04-2016 VV93_RS07130 b8cae31c463ce8452aa2d97de650fe19 402 Pfam PF07690 Major Facilitator Superfamily 16 352 1.3E-35 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV93_RS12920 f0e5ea0e6c4010761460db535ab3a6c1 391 PANTHER PTHR13789:SF214 1 391 3.1E-172 T 23-04-2016 VV93_RS12920 f0e5ea0e6c4010761460db535ab3a6c1 391 Gene3D G3DSA:3.50.50.60 3 182 7.4E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS12920 f0e5ea0e6c4010761460db535ab3a6c1 391 Gene3D G3DSA:3.50.50.60 268 353 7.4E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS12920 f0e5ea0e6c4010761460db535ab3a6c1 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 387 7.2E-123 T 23-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 VV93_RS12920 f0e5ea0e6c4010761460db535ab3a6c1 391 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 387 2.0E-146 T 23-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 VV93_RS12920 f0e5ea0e6c4010761460db535ab3a6c1 391 SUPERFAMILY SSF51905 3 177 5.18E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS12920 f0e5ea0e6c4010761460db535ab3a6c1 391 SUPERFAMILY SSF51905 267 381 5.18E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS12920 f0e5ea0e6c4010761460db535ab3a6c1 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 3.1E-10 T 23-04-2016 VV93_RS12920 f0e5ea0e6c4010761460db535ab3a6c1 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 3.1E-10 T 23-04-2016 VV93_RS12920 f0e5ea0e6c4010761460db535ab3a6c1 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 3.1E-10 T 23-04-2016 VV93_RS12920 f0e5ea0e6c4010761460db535ab3a6c1 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.1E-10 T 23-04-2016 VV93_RS12920 f0e5ea0e6c4010761460db535ab3a6c1 391 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 23-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 VV93_RS12920 f0e5ea0e6c4010761460db535ab3a6c1 391 PANTHER PTHR13789 1 391 3.1E-172 T 23-04-2016 VV93_RS12920 f0e5ea0e6c4010761460db535ab3a6c1 391 Pfam PF01494 FAD binding domain 4 335 2.0E-23 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 VV93_RS06970 345c30c3c8302fef9e26e6ea039c199f 420 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 410 1.6E-36 T 23-04-2016 IPR010352 Protein of unknown function DUF945 VV93_RS07090 800aab1dc7e626c804c24339c165a117 186 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 9 178 1.9E-61 T 23-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 VV93_RS07090 800aab1dc7e626c804c24339c165a117 186 SUPERFAMILY SSF52540 9 181 1.43E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07090 800aab1dc7e626c804c24339c165a117 186 Gene3D G3DSA:3.40.50.300 9 181 1.1E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07090 800aab1dc7e626c804c24339c165a117 186 PIRSF PIRSF006135 6 183 1.8E-54 T 23-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 VV93_RS07090 800aab1dc7e626c804c24339c165a117 186 PANTHER PTHR34848 9 183 3.1E-68 T 23-04-2016 VV93_RS03415 d6335b6eff61f7c88f8f04a0ec651806 499 PANTHER PTHR30005 3 499 3.9E-208 T 23-04-2016 VV93_RS03415 d6335b6eff61f7c88f8f04a0ec651806 499 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 9 302 1.3E-100 T 23-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 VV93_RS03415 d6335b6eff61f7c88f8f04a0ec651806 499 SUPERFAMILY SSF109604 309 498 7.33E-50 T 23-04-2016 VV93_RS03415 d6335b6eff61f7c88f8f04a0ec651806 499 PIRSF PIRSF001267 1 499 1.5E-197 T 23-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VV93_RS03415 d6335b6eff61f7c88f8f04a0ec651806 499 SUPERFAMILY SSF53067 135 305 2.07E-44 T 23-04-2016 VV93_RS03415 d6335b6eff61f7c88f8f04a0ec651806 499 Gene3D G3DSA:3.30.420.40 3 128 3.2E-43 T 23-04-2016 VV93_RS03415 d6335b6eff61f7c88f8f04a0ec651806 499 PANTHER PTHR30005:SF4 3 499 3.9E-208 T 23-04-2016 VV93_RS03415 d6335b6eff61f7c88f8f04a0ec651806 499 SUPERFAMILY SSF53067 9 128 1.94E-35 T 23-04-2016 VV93_RS03415 d6335b6eff61f7c88f8f04a0ec651806 499 Pfam PF02541 Ppx/GppA phosphatase family 22 304 2.1E-83 T 23-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VV93_RS03415 d6335b6eff61f7c88f8f04a0ec651806 499 Gene3D G3DSA:3.30.420.150 130 304 1.0E-50 T 23-04-2016 VV93_RS01460 4576903cd7f4107f8bdee5f1cc5fa10a 78 Gene3D G3DSA:2.30.170.40 2 77 2.4E-35 T 23-04-2016 VV93_RS01460 4576903cd7f4107f8bdee5f1cc5fa10a 78 PANTHER PTHR13528 1 74 7.4E-34 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 VV93_RS01460 4576903cd7f4107f8bdee5f1cc5fa10a 78 SUPERFAMILY SSF143800 2 76 1.35E-29 T 23-04-2016 VV93_RS01460 4576903cd7f4107f8bdee5f1cc5fa10a 78 Pfam PF00830 Ribosomal L28 family 3 62 9.1E-26 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 VV93_RS01460 4576903cd7f4107f8bdee5f1cc5fa10a 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 4.6E-27 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01460 4576903cd7f4107f8bdee5f1cc5fa10a 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.065 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13550 fbd3c834dce85e56a48a067fa3afe595 282 SUPERFAMILY SSF52540 5 261 4.86E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13550 fbd3c834dce85e56a48a067fa3afe595 282 Pfam PF13401 AAA domain 42 168 2.2E-22 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS13550 fbd3c834dce85e56a48a067fa3afe595 282 PANTHER PTHR35894:SF1 2 281 6.2E-95 T 23-04-2016 VV93_RS13550 fbd3c834dce85e56a48a067fa3afe595 282 Gene3D G3DSA:3.40.50.300 29 179 5.2E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13550 fbd3c834dce85e56a48a067fa3afe595 282 PANTHER PTHR35894 2 281 6.2E-95 T 23-04-2016 VV93_RS14375 4922c568f20539545a355063c71eb246 605 SUPERFAMILY SSF46977 444 582 9.03E-43 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VV93_RS14375 4922c568f20539545a355063c71eb246 605 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 23-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 VV93_RS14375 4922c568f20539545a355063c71eb246 605 Gene3D G3DSA:4.10.80.40 543 577 9.2E-17 T 23-04-2016 VV93_RS14375 4922c568f20539545a355063c71eb246 605 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.5E-5 T 23-04-2016 VV93_RS14375 4922c568f20539545a355063c71eb246 605 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.5E-5 T 23-04-2016 VV93_RS14375 4922c568f20539545a355063c71eb246 605 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 4 582 0.0 T 23-04-2016 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 VV93_RS14375 4922c568f20539545a355063c71eb246 605 PANTHER PTHR11632 1 584 0.0 T 23-04-2016 VV93_RS14375 4922c568f20539545a355063c71eb246 605 Pfam PF00890 FAD binding domain 7 397 2.8E-114 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VV93_RS14375 4922c568f20539545a355063c71eb246 605 Gene3D G3DSA:3.90.700.10 234 351 4.8E-35 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VV93_RS14375 4922c568f20539545a355063c71eb246 605 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 1.0E-9 T 23-04-2016 VV93_RS14375 4922c568f20539545a355063c71eb246 605 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.0E-9 T 23-04-2016 VV93_RS14375 4922c568f20539545a355063c71eb246 605 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.5E-37 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VV93_RS14375 4922c568f20539545a355063c71eb246 605 SUPERFAMILY SSF56425 227 358 3.74E-41 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VV93_RS14375 4922c568f20539545a355063c71eb246 605 SUPERFAMILY SSF51905 3 250 2.74E-74 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS14375 4922c568f20539545a355063c71eb246 605 SUPERFAMILY SSF51905 361 439 2.74E-74 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS14375 4922c568f20539545a355063c71eb246 605 Gene3D G3DSA:1.20.58.100 427 537 7.2E-37 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VV93_RS14375 4922c568f20539545a355063c71eb246 605 Gene3D G3DSA:3.50.50.60 4 233 1.9E-108 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS14375 4922c568f20539545a355063c71eb246 605 Gene3D G3DSA:3.50.50.60 353 417 1.9E-108 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS14375 4922c568f20539545a355063c71eb246 605 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 4.4E-236 T 23-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VV93_RS14375 4922c568f20539545a355063c71eb246 605 PANTHER PTHR11632:SF50 1 584 0.0 T 23-04-2016 VV93_RS14375 4922c568f20539545a355063c71eb246 605 PIRSF PIRSF000171 1 575 8.8E-45 T 23-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit VV93_RS06445 21833bed7e16ded0bf5f62330d9342ca 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.984 T 23-04-2016 IPR007451 Uncharacterised protein family UPF0274 VV93_RS06445 21833bed7e16ded0bf5f62330d9342ca 205 Gene3D G3DSA:1.10.3890.10 2 205 5.5E-89 T 23-04-2016 IPR007451 Uncharacterised protein family UPF0274 VV93_RS06445 21833bed7e16ded0bf5f62330d9342ca 205 PANTHER PTHR38100 2 205 2.6E-95 T 23-04-2016 VV93_RS06445 21833bed7e16ded0bf5f62330d9342ca 205 SUPERFAMILY SSF101322 2 204 1.2E-81 T 23-04-2016 IPR007451 Uncharacterised protein family UPF0274 VV93_RS06445 21833bed7e16ded0bf5f62330d9342ca 205 PANTHER PTHR38100:SF1 2 205 2.6E-95 T 23-04-2016 VV93_RS06445 21833bed7e16ded0bf5f62330d9342ca 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 1.1E-77 T 23-04-2016 IPR007451 Uncharacterised protein family UPF0274 VV93_RS06445 21833bed7e16ded0bf5f62330d9342ca 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 2.0E-107 T 23-04-2016 IPR007451 Uncharacterised protein family UPF0274 VV93_RS01650 4dedbae560972f5ea4ba7dafc73ff552 243 Gene3D G3DSA:2.40.360.10 30 240 8.0E-70 T 23-04-2016 IPR023373 YmcC-like domain VV93_RS01650 4dedbae560972f5ea4ba7dafc73ff552 243 SUPERFAMILY SSF159270 32 239 4.18E-56 T 23-04-2016 IPR023373 YmcC-like domain VV93_RS01650 4dedbae560972f5ea4ba7dafc73ff552 243 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 27 235 5.4E-61 T 23-04-2016 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB VV93_RS00560 fc84372d37d7f69442923dbca83b6673 395 Gene3D G3DSA:3.40.50.300 188 392 3.6E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00560 fc84372d37d7f69442923dbca83b6673 395 SUPERFAMILY SSF47364 91 170 1.07E-22 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VV93_RS00560 fc84372d37d7f69442923dbca83b6673 395 SMART SM00382 190 370 2.5E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS00560 fc84372d37d7f69442923dbca83b6673 395 SUPERFAMILY SSF52540 189 392 3.02E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00560 fc84372d37d7f69442923dbca83b6673 395 Pfam PF00448 SRP54-type protein, GTPase domain 192 391 4.4E-78 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VV93_RS00560 fc84372d37d7f69442923dbca83b6673 395 Gene3D G3DSA:1.20.120.140 82 172 4.9E-34 T 23-04-2016 VV93_RS00560 fc84372d37d7f69442923dbca83b6673 395 PANTHER PTHR11564 86 395 9.0E-152 T 23-04-2016 VV93_RS00560 fc84372d37d7f69442923dbca83b6673 395 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 119 391 3.2E-116 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VV93_RS00560 fc84372d37d7f69442923dbca83b6673 395 SMART SM00963 96 176 2.0E-26 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VV93_RS00560 fc84372d37d7f69442923dbca83b6673 395 Pfam PF02881 SRP54-type protein, helical bundle domain 111 172 7.1E-14 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VV93_RS00560 fc84372d37d7f69442923dbca83b6673 395 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 365 378 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VV93_RS00560 fc84372d37d7f69442923dbca83b6673 395 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 119 392 65.184 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VV93_RS00560 fc84372d37d7f69442923dbca83b6673 395 SMART SM00962 191 392 1.1E-124 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VV93_RS00560 fc84372d37d7f69442923dbca83b6673 395 PANTHER PTHR11564:SF16 86 395 9.0E-152 T 23-04-2016 VV93_RS04530 de69bb3e83ffbe228f1e3a3338fd66ad 211 PIRSF PIRSF028688 1 211 1.8E-123 T 23-04-2016 IPR014549 Flagellar protein FlgO VV93_RS05865 c8be55b5c1eed7ac9113348044d6b7a1 206 Pfam PF01300 Telomere recombination 23 198 2.6E-45 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 VV93_RS05865 c8be55b5c1eed7ac9113348044d6b7a1 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 1.0E-70 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 VV93_RS05865 c8be55b5c1eed7ac9113348044d6b7a1 206 PANTHER PTHR17490:SF7 1 205 9.5E-97 T 23-04-2016 VV93_RS05865 c8be55b5c1eed7ac9113348044d6b7a1 206 SUPERFAMILY SSF55821 1 203 5.49E-64 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VV93_RS05865 c8be55b5c1eed7ac9113348044d6b7a1 206 PANTHER PTHR17490 1 205 9.5E-97 T 23-04-2016 VV93_RS05865 c8be55b5c1eed7ac9113348044d6b7a1 206 Gene3D G3DSA:3.90.870.10 2 202 1.8E-63 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VV93_RS02890 f98d8b6f81b15423f49a56e661c6178a 259 PANTHER PTHR30269 3 255 8.2E-101 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VV93_RS02890 f98d8b6f81b15423f49a56e661c6178a 259 PANTHER PTHR30269:SF0 3 255 8.2E-101 T 23-04-2016 VV93_RS02890 f98d8b6f81b15423f49a56e661c6178a 259 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 5.5E-40 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VV93_RS12460 cd69dbb6157485d75a00cdd69dec06a2 238 PANTHER PTHR30545:SF2 1 227 2.4E-82 T 23-04-2016 VV93_RS12460 cd69dbb6157485d75a00cdd69dec06a2 238 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 237 53.857 T 23-04-2016 IPR005224 Sugar fermentation stimulation protein VV93_RS12460 cd69dbb6157485d75a00cdd69dec06a2 238 Pfam PF03749 Sugar fermentation stimulation protein 14 229 8.2E-77 T 23-04-2016 IPR005224 Sugar fermentation stimulation protein VV93_RS12460 cd69dbb6157485d75a00cdd69dec06a2 238 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 229 1.9E-75 T 23-04-2016 IPR005224 Sugar fermentation stimulation protein VV93_RS12460 cd69dbb6157485d75a00cdd69dec06a2 238 PANTHER PTHR30545 1 227 2.4E-82 T 23-04-2016 VV93_RS03370 239655d4ef8acb1918ce0bdebb488a15 375 Gene3D G3DSA:3.40.50.150 2 181 3.8E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS03370 239655d4ef8acb1918ce0bdebb488a15 375 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 5 358 5.2E-40 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VV93_RS03370 239655d4ef8acb1918ce0bdebb488a15 375 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 3 19 1.2E-12 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VV93_RS03370 239655d4ef8acb1918ce0bdebb488a15 375 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 126 140 1.2E-12 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VV93_RS03370 239655d4ef8acb1918ce0bdebb488a15 375 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 173 186 1.2E-12 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VV93_RS03370 239655d4ef8acb1918ce0bdebb488a15 375 PANTHER PTHR10629 3 374 1.3E-53 T 23-04-2016 VV93_RS03370 239655d4ef8acb1918ce0bdebb488a15 375 SUPERFAMILY SSF53335 3 215 1.16E-57 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS03370 239655d4ef8acb1918ce0bdebb488a15 375 SUPERFAMILY SSF53335 250 369 1.16E-57 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS03370 239655d4ef8acb1918ce0bdebb488a15 375 Gene3D G3DSA:3.90.120.10 252 354 8.5E-14 T 23-04-2016 VV93_RS03370 239655d4ef8acb1918ce0bdebb488a15 375 Gene3D G3DSA:3.90.120.10 182 198 8.5E-14 T 23-04-2016 VV93_RS03370 239655d4ef8acb1918ce0bdebb488a15 375 PANTHER PTHR10629:SF32 3 374 1.3E-53 T 23-04-2016 VV93_RS03370 239655d4ef8acb1918ce0bdebb488a15 375 Pfam PF00145 C-5 cytosine-specific DNA methylase 4 361 1.0E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS10470 c41a6fba9c7778e07fd307ce0d9e9a69 227 Pfam PF00005 ABC transporter 24 172 1.3E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS10470 c41a6fba9c7778e07fd307ce0d9e9a69 227 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS10470 c41a6fba9c7778e07fd307ce0d9e9a69 227 SUPERFAMILY SSF52540 4 225 2.93E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10470 c41a6fba9c7778e07fd307ce0d9e9a69 227 Gene3D G3DSA:3.40.50.300 2 223 6.4E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10470 c41a6fba9c7778e07fd307ce0d9e9a69 227 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 1.0E-105 T 23-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 VV93_RS10470 c41a6fba9c7778e07fd307ce0d9e9a69 227 SMART SM00382 33 221 1.9E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS10470 c41a6fba9c7778e07fd307ce0d9e9a69 227 PANTHER PTHR24220 6 227 2.5E-118 T 23-04-2016 VV93_RS10470 c41a6fba9c7778e07fd307ce0d9e9a69 227 PANTHER PTHR24220:SF111 6 227 2.5E-118 T 23-04-2016 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 PIRSF PIRSF006356 1 406 9.4E-159 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 4.2E-44 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 4.2E-44 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 4.2E-44 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 4.2E-44 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 4.2E-44 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 4.2E-44 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 45.031 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 SUPERFAMILY SSF55909 3 406 3.39E-129 T 23-04-2016 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 Pfam PF02274 Amidinotransferase 19 403 7.5E-99 T 23-04-2016 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 TIGRFAM TIGR01078 arcA: arginine deiminase 4 406 3.7E-171 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 Gene3D G3DSA:3.75.10.10 149 406 7.5E-128 T 23-04-2016 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 Gene3D G3DSA:3.75.10.10 1 67 7.5E-128 T 23-04-2016 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 PANTHER PTHR12737 149 291 1.9E-122 T 23-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 PANTHER PTHR12737 2 91 1.9E-122 T 23-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 PANTHER PTHR12737 312 406 1.9E-122 T 23-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 PANTHER PTHR12737:SF13 149 291 1.9E-122 T 23-04-2016 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 PANTHER PTHR12737:SF13 2 91 1.9E-122 T 23-04-2016 VV93_RS13410 c0887ee31fa54da5ba48053f3c353ac1 406 PANTHER PTHR12737:SF13 312 406 1.9E-122 T 23-04-2016 VV93_RS13690 b635db39b4ad81d4d027426f1df0b608 258 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 26 247 3.1E-91 T 23-04-2016 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VV93_RS13690 b635db39b4ad81d4d027426f1df0b608 258 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 38.992 T 23-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VV93_RS13690 b635db39b4ad81d4d027426f1df0b608 258 PIRSF PIRSF000857 4 253 2.3E-57 T 23-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VV93_RS13690 b635db39b4ad81d4d027426f1df0b608 258 SUPERFAMILY SSF52402 26 213 1.76E-55 T 23-04-2016 VV93_RS13690 b635db39b4ad81d4d027426f1df0b608 258 Gene3D G3DSA:3.40.50.620 15 221 8.7E-64 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS13690 b635db39b4ad81d4d027426f1df0b608 258 PANTHER PTHR23293 22 255 5.9E-92 T 23-04-2016 VV93_RS13690 b635db39b4ad81d4d027426f1df0b608 258 PANTHER PTHR23293:SF5 22 255 5.9E-92 T 23-04-2016 VV93_RS13690 b635db39b4ad81d4d027426f1df0b608 258 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 38 248 2.6E-85 T 23-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VV93_RS13690 b635db39b4ad81d4d027426f1df0b608 258 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 54 224 3.0E-50 T 23-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 PANTHER PTHR11014 334 490 1.9E-199 T 23-04-2016 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 PIRSF PIRSF016599 5 489 1.4E-216 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 SUPERFAMILY SSF53187 401 486 3.67E-62 T 23-04-2016 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 SUPERFAMILY SSF53187 15 186 3.67E-62 T 23-04-2016 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 PANTHER PTHR11014 208 283 1.9E-199 T 23-04-2016 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 PANTHER PTHR11014 1 189 1.9E-199 T 23-04-2016 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 PANTHER PTHR11014:SF54 208 283 1.9E-199 T 23-04-2016 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 PANTHER PTHR11014:SF54 334 490 1.9E-199 T 23-04-2016 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 PANTHER PTHR11014:SF54 1 189 1.9E-199 T 23-04-2016 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 Pfam PF01546 Peptidase family M20/M25/M40 77 477 2.0E-20 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 Pfam PF07687 Peptidase dimerisation domain 211 296 4.3E-9 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 2.3E-88 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 2.3E-88 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 2.3E-88 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 2.3E-88 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 2.3E-88 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 2.3E-88 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 2.3E-88 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 2.3E-88 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 2.3E-88 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 13 486 8.7E-183 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 Gene3D G3DSA:3.40.630.10 7 185 1.4E-106 T 23-04-2016 VV93_RS04010 2fc7f36266bafe1e56c0b92a1e55d037 490 Gene3D G3DSA:3.40.630.10 401 488 1.4E-106 T 23-04-2016 VV93_RS04880 de01f0c2de3bf73eef77eeca0d63925c 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 3.6E-239 T 23-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 VV93_RS04880 de01f0c2de3bf73eef77eeca0d63925c 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 1.5E-135 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS04880 de01f0c2de3bf73eef77eeca0d63925c 429 PIRSF PIRSF001369 38 429 8.2E-175 T 23-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 VV93_RS04880 de01f0c2de3bf73eef77eeca0d63925c 429 Gene3D G3DSA:1.10.580.10 52 280 5.3E-100 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 VV93_RS04880 de01f0c2de3bf73eef77eeca0d63925c 429 SUPERFAMILY SSF48256 4 428 5.89E-170 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS04880 de01f0c2de3bf73eef77eeca0d63925c 429 PANTHER PTHR11739 39 429 3.6E-209 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS04880 de01f0c2de3bf73eef77eeca0d63925c 429 Gene3D G3DSA:1.10.230.10 281 373 1.9E-44 T 23-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain VV93_RS04880 de01f0c2de3bf73eef77eeca0d63925c 429 PRINTS PR00143 Citrate synthase signature 379 393 2.7E-55 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS04880 de01f0c2de3bf73eef77eeca0d63925c 429 PRINTS PR00143 Citrate synthase signature 296 316 2.7E-55 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS04880 de01f0c2de3bf73eef77eeca0d63925c 429 PRINTS PR00143 Citrate synthase signature 165 178 2.7E-55 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS04880 de01f0c2de3bf73eef77eeca0d63925c 429 PRINTS PR00143 Citrate synthase signature 359 375 2.7E-55 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS04880 de01f0c2de3bf73eef77eeca0d63925c 429 PRINTS PR00143 Citrate synthase signature 219 234 2.7E-55 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS04880 de01f0c2de3bf73eef77eeca0d63925c 429 PRINTS PR00143 Citrate synthase signature 241 269 2.7E-55 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS04880 de01f0c2de3bf73eef77eeca0d63925c 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 23-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 VV93_RS01985 5e939f20b599f98dc5d917fe80901837 574 Pfam PF02080 TrkA-C domain 209 276 8.4E-12 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS01985 5e939f20b599f98dc5d917fe80901837 574 Pfam PF02080 TrkA-C domain 293 349 1.3E-11 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS01985 5e939f20b599f98dc5d917fe80901837 574 PANTHER PTHR10283:SF79 1 31 1.9E-68 T 23-04-2016 VV93_RS01985 5e939f20b599f98dc5d917fe80901837 574 PANTHER PTHR10283:SF79 51 260 1.9E-68 T 23-04-2016 VV93_RS01985 5e939f20b599f98dc5d917fe80901837 574 PANTHER PTHR10283:SF79 412 572 1.9E-68 T 23-04-2016 VV93_RS01985 5e939f20b599f98dc5d917fe80901837 574 PANTHER PTHR10283:SF79 337 364 1.9E-68 T 23-04-2016 VV93_RS01985 5e939f20b599f98dc5d917fe80901837 574 Gene3D G3DSA:3.30.70.1450 207 286 9.4E-18 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS01985 5e939f20b599f98dc5d917fe80901837 574 Gene3D G3DSA:3.30.70.1450 290 349 2.3E-15 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS01985 5e939f20b599f98dc5d917fe80901837 574 PANTHER PTHR10283 1 31 1.9E-68 T 23-04-2016 VV93_RS01985 5e939f20b599f98dc5d917fe80901837 574 PANTHER PTHR10283 51 260 1.9E-68 T 23-04-2016 VV93_RS01985 5e939f20b599f98dc5d917fe80901837 574 PANTHER PTHR10283 412 572 1.9E-68 T 23-04-2016 VV93_RS01985 5e939f20b599f98dc5d917fe80901837 574 PANTHER PTHR10283 337 364 1.9E-68 T 23-04-2016 VV93_RS01985 5e939f20b599f98dc5d917fe80901837 574 SUPERFAMILY SSF116726 290 349 1.2E-13 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS01985 5e939f20b599f98dc5d917fe80901837 574 Pfam PF03600 Citrate transporter 32 518 7.0E-24 T 23-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 VV93_RS01985 5e939f20b599f98dc5d917fe80901837 574 SUPERFAMILY SSF116726 206 283 1.31E-16 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS01865 3f16209064057c8aae87abe0bb031afc 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 23-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 VV93_RS01865 3f16209064057c8aae87abe0bb031afc 101 SUPERFAMILY SSF57716 2 101 5.99E-37 T 23-04-2016 VV93_RS01865 3f16209064057c8aae87abe0bb031afc 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.871 T 23-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid VV93_RS01865 3f16209064057c8aae87abe0bb031afc 101 Gene3D G3DSA:4.10.830.10 41 101 3.9E-30 T 23-04-2016 VV93_RS01865 3f16209064057c8aae87abe0bb031afc 101 PANTHER PTHR19836 1 101 4.6E-60 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01865 3f16209064057c8aae87abe0bb031afc 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.0E-24 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01170 d448ec97e4127565c1046002c0305c9e 228 SUPERFAMILY SSF75217 4 177 1.37E-48 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases VV93_RS01170 d448ec97e4127565c1046002c0305c9e 228 PANTHER PTHR12029 1 189 5.3E-65 T 23-04-2016 VV93_RS01170 d448ec97e4127565c1046002c0305c9e 228 PANTHER PTHR12029:SF45 1 189 5.3E-65 T 23-04-2016 VV93_RS01170 d448ec97e4127565c1046002c0305c9e 228 Gene3D G3DSA:3.40.1280.10 2 176 1.0E-48 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VV93_RS01170 d448ec97e4127565c1046002c0305c9e 228 Pfam PF00588 SpoU rRNA Methylase family 20 159 2.8E-35 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VV93_RS01170 d448ec97e4127565c1046002c0305c9e 228 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 2.8E-23 T 23-04-2016 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 VV93_RS12595 89eaf757c7954d6c75deeadbb44a5cff 249 PIRSF PIRSF000386 1 249 1.7E-102 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VV93_RS12595 89eaf757c7954d6c75deeadbb44a5cff 249 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 2.3E-71 T 23-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VV93_RS12595 89eaf757c7954d6c75deeadbb44a5cff 249 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 249 119.62 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VV93_RS12595 89eaf757c7954d6c75deeadbb44a5cff 249 PANTHER PTHR32125:SF1 1 228 2.2E-122 T 23-04-2016 VV93_RS12595 89eaf757c7954d6c75deeadbb44a5cff 249 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 6.7E-110 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VV93_RS12595 89eaf757c7954d6c75deeadbb44a5cff 249 SUPERFAMILY SSF75217 1 246 1.88E-103 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases VV93_RS12595 89eaf757c7954d6c75deeadbb44a5cff 249 Gene3D G3DSA:1.10.1270.20 163 246 6.1E-37 T 23-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VV93_RS12595 89eaf757c7954d6c75deeadbb44a5cff 249 PANTHER PTHR32125 1 228 2.2E-122 T 23-04-2016 VV93_RS12595 89eaf757c7954d6c75deeadbb44a5cff 249 Gene3D G3DSA:3.40.1280.10 1 160 1.8E-68 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VV93_RS07815 cd2aa92e887add2a2801279eeeedd144 639 SUPERFAMILY SSF52540 126 238 3.58E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07815 cd2aa92e887add2a2801279eeeedd144 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS07815 cd2aa92e887add2a2801279eeeedd144 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS07815 cd2aa92e887add2a2801279eeeedd144 639 PANTHER PTHR19211:SF45 1 575 4.9E-241 T 23-04-2016 VV93_RS07815 cd2aa92e887add2a2801279eeeedd144 639 Pfam PF12848 ABC transporter 224 296 3.6E-11 T 23-04-2016 IPR032781 ABC-transporter extension domain VV93_RS07815 cd2aa92e887add2a2801279eeeedd144 639 Gene3D G3DSA:3.40.50.300 2 271 5.5E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07815 cd2aa92e887add2a2801279eeeedd144 639 Gene3D G3DSA:3.40.50.300 318 539 1.8E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07815 cd2aa92e887add2a2801279eeeedd144 639 Pfam PF16326 ABC transporter C-terminal domain 565 634 1.6E-20 T 23-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 VV93_RS07815 cd2aa92e887add2a2801279eeeedd144 639 PANTHER PTHR19211 1 575 4.9E-241 T 23-04-2016 VV93_RS07815 cd2aa92e887add2a2801279eeeedd144 639 SUPERFAMILY SSF52540 312 521 4.56E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07815 cd2aa92e887add2a2801279eeeedd144 639 SMART SM00382 344 514 3.6E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS07815 cd2aa92e887add2a2801279eeeedd144 639 SMART SM00382 28 230 2.8E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS07815 cd2aa92e887add2a2801279eeeedd144 639 SUPERFAMILY SSF52540 4 94 3.58E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07815 cd2aa92e887add2a2801279eeeedd144 639 Pfam PF00005 ABC transporter 19 185 9.7E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS07815 cd2aa92e887add2a2801279eeeedd144 639 Pfam PF00005 ABC transporter 336 469 1.1E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS08160 39be757ef89b578bef7e74ddcb7bf4c1 293 Gene3D G3DSA:3.30.70.100 198 283 2.0E-5 T 23-04-2016 VV93_RS08160 39be757ef89b578bef7e74ddcb7bf4c1 293 Gene3D G3DSA:2.30.30.60 141 186 2.4E-14 T 23-04-2016 VV93_RS08160 39be757ef89b578bef7e74ddcb7bf4c1 293 Pfam PF00924 Mechanosensitive ion channel 87 284 2.8E-35 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VV93_RS08160 39be757ef89b578bef7e74ddcb7bf4c1 293 PANTHER PTHR30566 46 287 4.5E-43 T 23-04-2016 VV93_RS08160 39be757ef89b578bef7e74ddcb7bf4c1 293 SUPERFAMILY SSF50182 126 186 3.27E-14 T 23-04-2016 IPR010920 LSM domain VV93_RS08160 39be757ef89b578bef7e74ddcb7bf4c1 293 SUPERFAMILY SSF82689 198 286 1.57E-7 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VV93_RS08160 39be757ef89b578bef7e74ddcb7bf4c1 293 PANTHER PTHR30566:SF11 46 287 4.5E-43 T 23-04-2016 VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 SUPERFAMILY SSF55021 383 476 1.9E-20 T 23-04-2016 VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 Pfam PF01842 ACT domain 324 377 5.1E-9 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 SUPERFAMILY SSF55021 303 381 7.85E-21 T 23-04-2016 VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 Pfam PF00696 Amino acid kinase family 2 284 1.4E-48 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 Gene3D G3DSA:3.40.1160.10 111 299 5.9E-66 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 Gene3D G3DSA:3.40.1160.10 1 49 5.9E-66 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 SUPERFAMILY SSF53633 1 298 5.54E-76 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 PANTHER PTHR21499:SF1 1 471 2.1E-176 T 23-04-2016 VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 PANTHER PTHR21499 1 471 2.1E-176 T 23-04-2016 VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 1.6E-26 T 23-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 Gene3D G3DSA:3.40.50.720 465 635 4.2E-64 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 PIRSF PIRSF000727 1 817 0.0 T 23-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 23-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 Pfam PF00742 Homoserine dehydrogenase 614 810 1.7E-47 T 23-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 SUPERFAMILY SSF51735 463 636 1.58E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 7.2E-129 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 SUPERFAMILY SSF55347 614 797 2.03E-50 T 23-04-2016 VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 Gene3D G3DSA:3.30.360.10 636 791 2.2E-54 T 23-04-2016 VV93_RS02985 ce8fb61f608d5949d6b44fba2e870d97 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS14050 1c0636c55914d38e89601a52d017efba 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.621 T 23-04-2016 IPR007236 SlyX VV93_RS14050 1c0636c55914d38e89601a52d017efba 75 PANTHER PTHR36508 4 75 4.2E-26 T 23-04-2016 VV93_RS14050 1c0636c55914d38e89601a52d017efba 75 Gene3D G3DSA:1.20.5.300 8 55 6.2E-24 T 23-04-2016 VV93_RS14050 1c0636c55914d38e89601a52d017efba 75 Pfam PF04102 SlyX 9 75 1.2E-24 T 23-04-2016 IPR007236 SlyX VV93_RS00175 815e40ea74c8b9329fe92e8cb047b063 494 SUPERFAMILY SSF48179 210 341 4.08E-40 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VV93_RS00175 815e40ea74c8b9329fe92e8cb047b063 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 5.6E-125 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS00175 815e40ea74c8b9329fe92e8cb047b063 494 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 488 36.988 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS00175 815e40ea74c8b9329fe92e8cb047b063 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 1.3E-26 T 23-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS00175 815e40ea74c8b9329fe92e8cb047b063 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 1.3E-16 T 23-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS00175 815e40ea74c8b9329fe92e8cb047b063 494 SUPERFAMILY SSF51735 27 209 7.05E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS00175 815e40ea74c8b9329fe92e8cb047b063 494 Gene3D G3DSA:3.40.50.720 1 201 8.8E-75 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS00175 815e40ea74c8b9329fe92e8cb047b063 494 PANTHER PTHR21371 1 492 8.2E-203 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS00175 815e40ea74c8b9329fe92e8cb047b063 494 SUPERFAMILY SSF48179 348 487 1.87E-42 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VV93_RS00175 815e40ea74c8b9329fe92e8cb047b063 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 5.9E-60 T 23-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS11985 06b35d47d40c85c39dafda2e1f7fa16b 488 Pfam PF00263 Bacterial type II and III secretion system protein 260 422 1.0E-39 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 VV93_RS11985 06b35d47d40c85c39dafda2e1f7fa16b 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 178 188 1.2E-11 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS11985 06b35d47d40c85c39dafda2e1f7fa16b 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 388 406 1.2E-11 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS11985 06b35d47d40c85c39dafda2e1f7fa16b 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 254 278 1.2E-11 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS11985 06b35d47d40c85c39dafda2e1f7fa16b 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 411 425 1.2E-11 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS11985 06b35d47d40c85c39dafda2e1f7fa16b 488 Pfam PF13629 Pilus formation protein N terminal region 26 95 1.0E-18 T 23-04-2016 IPR032789 Pilus formation protein, N-terminal VV93_RS11985 06b35d47d40c85c39dafda2e1f7fa16b 488 PANTHER PTHR30332 149 449 1.5E-62 T 23-04-2016 VV93_RS11985 06b35d47d40c85c39dafda2e1f7fa16b 488 PANTHER PTHR30332:SF1 149 449 1.5E-62 T 23-04-2016 VV93_RS05050 fe2ef9f65be6ebac093b9c36ddd9f223 399 Pfam PF07670 Nucleoside recognition 87 182 2.5E-7 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VV93_RS05050 fe2ef9f65be6ebac093b9c36ddd9f223 399 PANTHER PTHR10590 3 396 6.9E-187 T 23-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VV93_RS05050 fe2ef9f65be6ebac093b9c36ddd9f223 399 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 4.9E-24 T 23-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VV93_RS05050 fe2ef9f65be6ebac093b9c36ddd9f223 399 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 189 396 2.9E-72 T 23-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VV93_RS05050 fe2ef9f65be6ebac093b9c36ddd9f223 399 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 2 395 7.1E-137 T 23-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VV93_RS09600 bf918cc526c881bf08b28a8ca28cab61 612 PIRSF PIRSF036918 1 612 5.4E-271 T 23-04-2016 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 VV93_RS09600 bf918cc526c881bf08b28a8ca28cab61 612 Pfam PF16657 Maltogenic Amylase, C-terminal domain 531 592 4.8E-7 T 23-04-2016 IPR032091 Maltogenic Amylase, C-terminal VV93_RS09600 bf918cc526c881bf08b28a8ca28cab61 612 PANTHER PTHR10357 174 583 2.4E-188 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VV93_RS09600 bf918cc526c881bf08b28a8ca28cab61 612 PANTHER PTHR10357 33 139 2.4E-188 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VV93_RS09600 bf918cc526c881bf08b28a8ca28cab61 612 Pfam PF00128 Alpha amylase, catalytic domain 178 495 7.9E-80 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV93_RS09600 bf918cc526c881bf08b28a8ca28cab61 612 PANTHER PTHR10357:SF144 174 583 2.4E-188 T 23-04-2016 VV93_RS09600 bf918cc526c881bf08b28a8ca28cab61 612 PANTHER PTHR10357:SF144 33 139 2.4E-188 T 23-04-2016 VV93_RS09600 bf918cc526c881bf08b28a8ca28cab61 612 Gene3D G3DSA:2.60.40.1180 531 611 6.7E-15 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta VV93_RS09600 bf918cc526c881bf08b28a8ca28cab61 612 SMART SM00642 126 522 1.6E-90 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV93_RS09600 bf918cc526c881bf08b28a8ca28cab61 612 SUPERFAMILY SSF51445 114 531 2.31E-101 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily VV93_RS09600 bf918cc526c881bf08b28a8ca28cab61 612 Gene3D G3DSA:3.20.20.80 118 524 9.1E-114 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VV93_RS09600 bf918cc526c881bf08b28a8ca28cab61 612 SUPERFAMILY SSF81296 1 109 4.43E-25 T 23-04-2016 IPR014756 Immunoglobulin E-set VV93_RS09600 bf918cc526c881bf08b28a8ca28cab61 612 Gene3D G3DSA:2.60.40.10 5 117 1.5E-16 T 23-04-2016 IPR013783 Immunoglobulin-like fold VV93_RS09600 bf918cc526c881bf08b28a8ca28cab61 612 SUPERFAMILY SSF51011 531 611 6.68E-12 T 23-04-2016 VV93_RS09600 bf918cc526c881bf08b28a8ca28cab61 612 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 6 109 8.3E-9 T 23-04-2016 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 VV93_RS01875 4a0d61b8b8d7e489cd4f1d0743d78d99 177 PANTHER PTHR11655 1 176 1.4E-87 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV93_RS01875 4a0d61b8b8d7e489cd4f1d0743d78d99 177 PANTHER PTHR11655:SF14 1 176 1.4E-87 T 23-04-2016 VV93_RS01875 4a0d61b8b8d7e489cd4f1d0743d78d99 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.3E-73 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV93_RS01875 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Gene3D G3DSA:3.90.930.12 2 82 3.7E-30 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV93_RS01875 4a0d61b8b8d7e489cd4f1d0743d78d99 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.4E-33 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV93_RS01875 4a0d61b8b8d7e489cd4f1d0743d78d99 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.4E-33 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV93_RS01875 4a0d61b8b8d7e489cd4f1d0743d78d99 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.4E-33 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV93_RS01875 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Gene3D G3DSA:3.90.930.12 83 177 3.1E-39 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV93_RS01875 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.168 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV93_RS01875 4a0d61b8b8d7e489cd4f1d0743d78d99 177 SUPERFAMILY SSF56053 1 82 4.68E-25 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV93_RS01875 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Pfam PF00347 Ribosomal protein L6 91 164 2.0E-17 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV93_RS01875 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Pfam PF00347 Ribosomal protein L6 11 82 7.9E-21 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV93_RS01875 4a0d61b8b8d7e489cd4f1d0743d78d99 177 SUPERFAMILY SSF56053 83 177 2.88E-34 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV93_RS01875 4a0d61b8b8d7e489cd4f1d0743d78d99 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 23-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01875 4a0d61b8b8d7e489cd4f1d0743d78d99 177 PIRSF PIRSF002162 1 177 8.6E-43 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV93_RS07440 7fb377cacd2313856ac33bea1cb91e07 397 PANTHER PTHR11061:SF12 3 397 1.4E-122 T 23-04-2016 VV93_RS07440 7fb377cacd2313856ac33bea1cb91e07 397 SMART SM00359 3 87 3.2E-14 T 23-04-2016 IPR002478 PUA domain GO:0003723 VV93_RS07440 7fb377cacd2313856ac33bea1cb91e07 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 168 376 9.2E-31 T 23-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VV93_RS07440 7fb377cacd2313856ac33bea1cb91e07 397 Gene3D G3DSA:3.40.50.150 182 396 2.8E-58 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS07440 7fb377cacd2313856ac33bea1cb91e07 397 PANTHER PTHR11061 3 397 1.4E-122 T 23-04-2016 VV93_RS07440 7fb377cacd2313856ac33bea1cb91e07 397 Gene3D G3DSA:2.30.130.10 4 71 2.7E-27 T 23-04-2016 IPR015947 PUA-like domain VV93_RS07440 7fb377cacd2313856ac33bea1cb91e07 397 SUPERFAMILY SSF53335 78 393 7.88E-70 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS07440 7fb377cacd2313856ac33bea1cb91e07 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.544 T 23-04-2016 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS07440 7fb377cacd2313856ac33bea1cb91e07 397 SUPERFAMILY SSF88697 4 73 2.13E-17 T 23-04-2016 IPR015947 PUA-like domain VV93_RS07440 7fb377cacd2313856ac33bea1cb91e07 397 Gene3D G3DSA:3.30.750.80 73 179 5.9E-37 T 23-04-2016 VV93_RS11405 46cc558686a7f57cb38c500bc1ec93b3 1159 SUPERFAMILY SSF89550 5 263 6.87E-14 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 VV93_RS11405 46cc558686a7f57cb38c500bc1ec93b3 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 23-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS11405 46cc558686a7f57cb38c500bc1ec93b3 1159 Pfam PF02811 PHP domain 8 172 4.4E-43 T 23-04-2016 IPR004013 PHP domain GO:0003824 VV93_RS11405 46cc558686a7f57cb38c500bc1ec93b3 1159 Gene3D G3DSA:3.20.20.140 5 256 1.4E-20 T 23-04-2016 VV93_RS11405 46cc558686a7f57cb38c500bc1ec93b3 1159 Pfam PF01336 OB-fold nucleic acid binding domain 999 1071 2.9E-10 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VV93_RS11405 46cc558686a7f57cb38c500bc1ec93b3 1159 PANTHER PTHR32294 2 1159 0.0 T 23-04-2016 VV93_RS11405 46cc558686a7f57cb38c500bc1ec93b3 1159 SUPERFAMILY SSF50249 978 1066 5.31E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS11405 46cc558686a7f57cb38c500bc1ec93b3 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 8.7E-26 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS11405 46cc558686a7f57cb38c500bc1ec93b3 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 1.3E-175 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS11405 46cc558686a7f57cb38c500bc1ec93b3 1159 SMART SM00481 7 74 2.1E-26 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 VV93_RS11405 46cc558686a7f57cb38c500bc1ec93b3 1159 Gene3D G3DSA:2.40.50.140 988 1076 3.9E-9 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS11405 46cc558686a7f57cb38c500bc1ec93b3 1159 Gene3D G3DSA:1.10.150.280 824 882 8.3E-7 T 23-04-2016 VV93_RS11405 46cc558686a7f57cb38c500bc1ec93b3 1159 PANTHER PTHR32294:SF0 2 1159 0.0 T 23-04-2016 VV93_RS05240 fe84467392a3b4a2d08274396d8e5203 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VV93_RS05240 fe84467392a3b4a2d08274396d8e5203 446 Pfam PF00158 Sigma-54 interaction domain 144 310 2.2E-70 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV93_RS05240 fe84467392a3b4a2d08274396d8e5203 446 PANTHER PTHR32071 4 446 1.9E-252 T 23-04-2016 VV93_RS05240 fe84467392a3b4a2d08274396d8e5203 446 SMART SM00448 2 114 2.0E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS05240 fe84467392a3b4a2d08274396d8e5203 446 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 8.8E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS05240 fe84467392a3b4a2d08274396d8e5203 446 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VV93_RS05240 fe84467392a3b4a2d08274396d8e5203 446 SUPERFAMILY SSF52540 144 373 1.69E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05240 fe84467392a3b4a2d08274396d8e5203 446 Gene3D G3DSA:3.40.50.2300 3 127 2.0E-33 T 23-04-2016 VV93_RS05240 fe84467392a3b4a2d08274396d8e5203 446 Gene3D G3DSA:1.10.8.60 317 368 1.7E-21 T 23-04-2016 VV93_RS05240 fe84467392a3b4a2d08274396d8e5203 446 Gene3D G3DSA:3.40.50.300 143 316 7.1E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05240 fe84467392a3b4a2d08274396d8e5203 446 SMART SM00382 164 307 2.1E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS05240 fe84467392a3b4a2d08274396d8e5203 446 Pfam PF00072 Response regulator receiver domain 5 114 9.3E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS05240 fe84467392a3b4a2d08274396d8e5203 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV93_RS05240 fe84467392a3b4a2d08274396d8e5203 446 SUPERFAMILY SSF52172 4 188 1.99E-38 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS05240 fe84467392a3b4a2d08274396d8e5203 446 Gene3D G3DSA:1.10.10.60 369 440 6.6E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS05240 fe84467392a3b4a2d08274396d8e5203 446 PANTHER PTHR32071:SF11 4 446 1.9E-252 T 23-04-2016 VV93_RS05240 fe84467392a3b4a2d08274396d8e5203 446 SUPERFAMILY SSF46689 387 440 9.41E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS11420 64459c7ce6fb23096a0594373061d83d 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.1E-111 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VV93_RS11420 64459c7ce6fb23096a0594373061d83d 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VV93_RS11420 64459c7ce6fb23096a0594373061d83d 262 Gene3D G3DSA:1.20.1180.10 197 262 1.2E-27 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VV93_RS11420 64459c7ce6fb23096a0594373061d83d 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 6 32 4.4E-6 T 23-04-2016 IPR001451 Hexapeptide repeat VV93_RS11420 64459c7ce6fb23096a0594373061d83d 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 1.6E-8 T 23-04-2016 IPR001451 Hexapeptide repeat VV93_RS11420 64459c7ce6fb23096a0594373061d83d 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 48.33 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VV93_RS11420 64459c7ce6fb23096a0594373061d83d 262 Gene3D G3DSA:2.160.10.10 4 194 2.0E-51 T 23-04-2016 VV93_RS11420 64459c7ce6fb23096a0594373061d83d 262 PIRSF PIRSF000456 4 262 1.6E-110 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VV93_RS11420 64459c7ce6fb23096a0594373061d83d 262 PANTHER PTHR23416:SF8 1 254 2.7E-142 T 23-04-2016 VV93_RS11420 64459c7ce6fb23096a0594373061d83d 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 4.6E-31 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VV93_RS11420 64459c7ce6fb23096a0594373061d83d 262 PANTHER PTHR23416 1 254 2.7E-142 T 23-04-2016 VV93_RS11420 64459c7ce6fb23096a0594373061d83d 262 SUPERFAMILY SSF51161 1 262 1.6E-84 T 23-04-2016 IPR011004 Trimeric LpxA-like VV93_RS04905 86494e32fe4194e608de937f85478945 941 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 2.0E-54 T 23-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VV93_RS04905 86494e32fe4194e608de937f85478945 941 Gene3D G3DSA:3.40.50.970 163 545 7.3E-80 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS04905 86494e32fe4194e608de937f85478945 941 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VV93_RS04905 86494e32fe4194e608de937f85478945 941 PANTHER PTHR23152:SF4 5 941 0.0 T 23-04-2016 VV93_RS04905 86494e32fe4194e608de937f85478945 941 PANTHER PTHR23152 5 941 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VV93_RS04905 86494e32fe4194e608de937f85478945 941 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 51 1.0E-13 T 23-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VV93_RS04905 86494e32fe4194e608de937f85478945 941 Pfam PF00676 Dehydrogenase E1 component 222 517 1.5E-49 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 VV93_RS04905 86494e32fe4194e608de937f85478945 941 SUPERFAMILY SSF52518 122 545 6.48E-89 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS04905 86494e32fe4194e608de937f85478945 941 PIRSF PIRSF000157 1 935 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VV93_RS04905 86494e32fe4194e608de937f85478945 941 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 9.2E-66 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VV93_RS04905 86494e32fe4194e608de937f85478945 941 SMART SM00861 594 787 4.7E-64 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VV93_RS04905 86494e32fe4194e608de937f85478945 941 Gene3D G3DSA:3.40.50.970 592 789 3.2E-25 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS04905 86494e32fe4194e608de937f85478945 941 SUPERFAMILY SSF52518 577 794 5.89E-52 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS06290 15ae2312ce8cfbdb12e62aadf3a4c5e6 273 PANTHER PTHR24220:SF535 8 272 2.7E-134 T 23-04-2016 VV93_RS06290 15ae2312ce8cfbdb12e62aadf3a4c5e6 273 Gene3D G3DSA:3.40.50.300 5 259 5.6E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06290 15ae2312ce8cfbdb12e62aadf3a4c5e6 273 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS06290 15ae2312ce8cfbdb12e62aadf3a4c5e6 273 SMART SM00382 35 244 2.6E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS06290 15ae2312ce8cfbdb12e62aadf3a4c5e6 273 PANTHER PTHR24220 8 272 2.7E-134 T 23-04-2016 VV93_RS06290 15ae2312ce8cfbdb12e62aadf3a4c5e6 273 SUPERFAMILY SSF52540 6 257 8.99E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06290 15ae2312ce8cfbdb12e62aadf3a4c5e6 273 Pfam PF00005 ABC transporter 26 186 9.0E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 Gene3D G3DSA:3.30.565.10 10 246 1.1E-81 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 Pfam PF00183 Hsp90 protein 226 633 2.8E-128 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 SUPERFAMILY SSF55874 10 217 4.06E-64 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 SUPERFAMILY SSF110942 520 632 1.09E-33 T 23-04-2016 VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.24 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 PANTHER PTHR11528:SF44 2 633 0.0 T 23-04-2016 VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 23-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 2.3E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 2.3E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 2.3E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 2.3E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 2.3E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 2.3E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 2.3E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 SMART SM00387 32 189 2.9E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 SUPERFAMILY SSF54211 238 493 5.08E-100 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 PIRSF PIRSF002583 1 634 2.2E-214 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 PANTHER PTHR11528 2 633 0.0 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VV93_RS04755 c46ed1f23cddee5ac218c3c3129ee3dc 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 187 3.5E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS04455 e40c4daf5113ff7c5cded7c112bfbb76 159 PIRSF PIRSF006181 1 159 2.3E-52 T 23-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VV93_RS04455 e40c4daf5113ff7c5cded7c112bfbb76 159 PANTHER PTHR30411 1 158 6.1E-65 T 23-04-2016 VV93_RS04455 e40c4daf5113ff7c5cded7c112bfbb76 159 PANTHER PTHR30411:SF0 1 158 6.1E-65 T 23-04-2016 VV93_RS04455 e40c4daf5113ff7c5cded7c112bfbb76 159 Gene3D G3DSA:3.90.960.10 1 156 8.3E-57 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VV93_RS04455 e40c4daf5113ff7c5cded7c112bfbb76 159 Pfam PF04073 Aminoacyl-tRNA editing domain 32 145 5.8E-25 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VV93_RS04455 e40c4daf5113ff7c5cded7c112bfbb76 159 SUPERFAMILY SSF55826 2 156 2.22E-42 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VV93_RS04455 e40c4daf5113ff7c5cded7c112bfbb76 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 2.6E-59 T 23-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VV93_RS12265 0732f18b9450034e563fe892628b5ae4 209 Gene3D G3DSA:3.40.50.150 1 208 1.1E-73 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS12265 0732f18b9450034e563fe892628b5ae4 209 PANTHER PTHR10920:SF20 1 209 2.1E-137 T 23-04-2016 VV93_RS12265 0732f18b9450034e563fe892628b5ae4 209 PANTHER PTHR10920 1 209 2.1E-137 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 VV93_RS12265 0732f18b9450034e563fe892628b5ae4 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 5.2E-57 T 23-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VV93_RS12265 0732f18b9450034e563fe892628b5ae4 209 PIRSF PIRSF005461 1 209 9.4E-81 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 VV93_RS12265 0732f18b9450034e563fe892628b5ae4 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 29.318 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 VV93_RS12265 0732f18b9450034e563fe892628b5ae4 209 SUPERFAMILY SSF53335 30 209 1.1E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS05725 6792031d273ab6a69f81331f9274643e 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV93_RS05725 6792031d273ab6a69f81331f9274643e 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VV93_RS05725 6792031d273ab6a69f81331f9274643e 466 Pfam PF02954 Bacterial regulatory protein, Fis family 417 457 8.7E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS05725 6792031d273ab6a69f81331f9274643e 466 Gene3D G3DSA:1.10.8.60 319 391 7.1E-21 T 23-04-2016 VV93_RS05725 6792031d273ab6a69f81331f9274643e 466 PANTHER PTHR32071:SF33 12 465 5.6E-216 T 23-04-2016 VV93_RS05725 6792031d273ab6a69f81331f9274643e 466 SUPERFAMILY SSF52540 146 389 1.21E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05725 6792031d273ab6a69f81331f9274643e 466 Gene3D G3DSA:3.40.50.2300 11 133 1.2E-33 T 23-04-2016 VV93_RS05725 6792031d273ab6a69f81331f9274643e 466 SUPERFAMILY SSF46689 359 456 1.33E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS05725 6792031d273ab6a69f81331f9274643e 466 SMART SM00382 166 309 8.5E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS05725 6792031d273ab6a69f81331f9274643e 466 Gene3D G3DSA:3.40.50.300 143 318 4.3E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05725 6792031d273ab6a69f81331f9274643e 466 Pfam PF00158 Sigma-54 interaction domain 147 312 8.2E-69 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV93_RS05725 6792031d273ab6a69f81331f9274643e 466 Pfam PF00072 Response regulator receiver domain 13 121 4.2E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS05725 6792031d273ab6a69f81331f9274643e 466 PANTHER PTHR32071 12 465 5.6E-216 T 23-04-2016 VV93_RS05725 6792031d273ab6a69f81331f9274643e 466 Gene3D G3DSA:1.10.10.60 416 455 1.0E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS05725 6792031d273ab6a69f81331f9274643e 466 SUPERFAMILY SSF52172 11 190 4.84E-41 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS05725 6792031d273ab6a69f81331f9274643e 466 SMART SM00448 10 121 1.0E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 8.0E-35 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SUPERFAMILY SSF50447 271 409 5.08E-36 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Gene3D G3DSA:3.30.70.870 411 485 1.7E-38 T 23-04-2016 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SUPERFAMILY SSF54980 608 695 6.71E-30 T 23-04-2016 IPR009022 Elongation factor G, III-V domain VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Gene3D G3DSA:3.30.230.10 489 604 3.7E-52 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SMART SM00889 485 603 8.5E-76 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Pfam PF00679 Elongation factor G C-terminus 605 691 6.2E-31 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Gene3D G3DSA:2.40.30.10 310 410 7.4E-39 T 23-04-2016 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 9.6E-68 T 23-04-2016 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 111.348 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SMART SM00838 605 693 1.5E-57 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PANTHER PTHR23115 261 289 0.0 T 23-04-2016 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PANTHER PTHR23115:SF66 6 184 0.0 T 23-04-2016 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PANTHER PTHR23115:SF66 308 697 0.0 T 23-04-2016 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Gene3D G3DSA:3.40.50.300 6 293 2.8E-105 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SUPERFAMILY SSF54211 484 604 7.59E-47 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Pfam PF14492 Elongation Factor G, domain II 409 483 1.7E-33 T 23-04-2016 IPR009022 Elongation factor G, III-V domain VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SUPERFAMILY SSF54980 407 485 8.99E-25 T 23-04-2016 IPR009022 Elongation factor G, III-V domain VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Pfam PF03764 Elongation factor G, domain IV 484 603 1.7E-48 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SUPERFAMILY SSF52540 6 288 1.97E-107 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 4.5E-18 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Gene3D G3DSA:3.30.70.240 605 691 8.0E-33 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PANTHER PTHR23115 6 184 0.0 T 23-04-2016 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PANTHER PTHR23115:SF66 261 289 0.0 T 23-04-2016 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV93_RS14005 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PANTHER PTHR23115 308 697 0.0 T 23-04-2016 VV93_RS05100 523bb08b3ecbf60cbfe56f3784ac350f 769 Gene3D G3DSA:1.20.1640.10 610 763 2.3E-13 T 23-04-2016 VV93_RS05100 523bb08b3ecbf60cbfe56f3784ac350f 769 Gene3D G3DSA:1.20.1640.10 232 398 9.7E-16 T 23-04-2016 VV93_RS05100 523bb08b3ecbf60cbfe56f3784ac350f 769 Pfam PF03176 MMPL family 195 399 4.1E-15 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 VV93_RS05100 523bb08b3ecbf60cbfe56f3784ac350f 769 SUPERFAMILY SSF82866 637 763 5.62E-21 T 23-04-2016 VV93_RS05100 523bb08b3ecbf60cbfe56f3784ac350f 769 SUPERFAMILY SSF82866 192 398 1.44E-18 T 23-04-2016 VV93_RS06725 a7ee46d1336fb056199b5614f994961f 538 SMART SM00304 207 260 4.3E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS06725 a7ee46d1336fb056199b5614f994961f 538 Pfam PF00672 HAMP domain 188 256 3.0E-14 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS06725 a7ee46d1336fb056199b5614f994961f 538 SUPERFAMILY SSF58104 232 537 4.32E-72 T 23-04-2016 VV93_RS06725 a7ee46d1336fb056199b5614f994961f 538 PANTHER PTHR32089 19 161 2.1E-105 T 23-04-2016 VV93_RS06725 a7ee46d1336fb056199b5614f994961f 538 PANTHER PTHR32089 181 538 2.1E-105 T 23-04-2016 VV93_RS06725 a7ee46d1336fb056199b5614f994961f 538 SMART SM00283 275 536 2.0E-72 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS06725 a7ee46d1336fb056199b5614f994961f 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 322 535 1.9E-50 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS06725 a7ee46d1336fb056199b5614f994961f 538 Gene3D G3DSA:1.10.287.950 290 506 4.2E-54 T 23-04-2016 VV93_RS00805 393d183011b2e0d586d331ed73f5b6b7 306 Pfam PF13737 Transposase DDE domain 19 129 6.8E-45 T 23-04-2016 IPR025668 Transposase DDE domain VV93_RS00805 393d183011b2e0d586d331ed73f5b6b7 306 PANTHER PTHR34631 3 306 5.7E-191 T 23-04-2016 VV93_RS00805 393d183011b2e0d586d331ed73f5b6b7 306 PANTHER PTHR34631:SF2 3 306 5.7E-191 T 23-04-2016 VV93_RS06335 52bbed5b2200d9861f6d66b6f0acc9d9 400 Gene3D G3DSA:3.40.50.150 120 183 2.3E-5 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS06335 52bbed5b2200d9861f6d66b6f0acc9d9 400 PANTHER PTHR13369:SF1 27 250 1.2E-88 T 23-04-2016 VV93_RS06335 52bbed5b2200d9861f6d66b6f0acc9d9 400 PANTHER PTHR13369:SF1 329 399 1.2E-88 T 23-04-2016 VV93_RS06335 52bbed5b2200d9861f6d66b6f0acc9d9 400 SUPERFAMILY SSF53335 114 192 2.98E-6 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS06335 52bbed5b2200d9861f6d66b6f0acc9d9 400 Pfam PF13679 Methyltransferase domain 117 230 3.8E-18 T 23-04-2016 IPR025714 Methyltransferase domain VV93_RS06335 52bbed5b2200d9861f6d66b6f0acc9d9 400 PANTHER PTHR13369 27 250 1.2E-88 T 23-04-2016 VV93_RS06335 52bbed5b2200d9861f6d66b6f0acc9d9 400 PANTHER PTHR13369 329 399 1.2E-88 T 23-04-2016 VV93_RS10780 1dc1c3598dfc7e2979b08837f52abcb1 403 SMART SM00825 Beta-ketoacyl synthase 4 403 2.0E-14 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VV93_RS10780 1dc1c3598dfc7e2979b08837f52abcb1 403 Gene3D G3DSA:3.40.47.10 261 402 5.1E-51 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS10780 1dc1c3598dfc7e2979b08837f52abcb1 403 SUPERFAMILY SSF53901 1 251 2.47E-66 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS10780 1dc1c3598dfc7e2979b08837f52abcb1 403 SUPERFAMILY SSF53901 213 401 1.19E-62 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS10780 1dc1c3598dfc7e2979b08837f52abcb1 403 PANTHER PTHR11712 1 401 1.5E-174 T 23-04-2016 VV93_RS10780 1dc1c3598dfc7e2979b08837f52abcb1 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 1.0E-46 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VV93_RS10780 1dc1c3598dfc7e2979b08837f52abcb1 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 1.4E-28 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal VV93_RS10780 1dc1c3598dfc7e2979b08837f52abcb1 403 Gene3D G3DSA:3.40.47.10 6 257 1.5E-63 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS10780 1dc1c3598dfc7e2979b08837f52abcb1 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site VV93_RS14565 1125f162dc8fd11037cfb609204d2713 546 Pfam PF00672 HAMP domain 199 265 2.5E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS14565 1125f162dc8fd11037cfb609204d2713 546 SMART SM01049 38 132 7.4E-45 T 23-04-2016 IPR033480 Single Cache domain 2 VV93_RS14565 1125f162dc8fd11037cfb609204d2713 546 SMART SM00304 215 269 1.5E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS14565 1125f162dc8fd11037cfb609204d2713 546 Gene3D G3DSA:3.30.450.20 32 185 2.3E-58 T 23-04-2016 VV93_RS14565 1125f162dc8fd11037cfb609204d2713 546 PANTHER PTHR32089 84 546 1.8E-131 T 23-04-2016 VV93_RS14565 1125f162dc8fd11037cfb609204d2713 546 PANTHER PTHR32089:SF34 84 546 1.8E-131 T 23-04-2016 VV93_RS14565 1125f162dc8fd11037cfb609204d2713 546 Gene3D G3DSA:1.10.287.950 299 516 3.0E-53 T 23-04-2016 VV93_RS14565 1125f162dc8fd11037cfb609204d2713 546 SMART SM00283 284 545 2.2E-63 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS14565 1125f162dc8fd11037cfb609204d2713 546 SUPERFAMILY SSF58104 237 546 1.83E-70 T 23-04-2016 VV93_RS14565 1125f162dc8fd11037cfb609204d2713 546 Pfam PF17200 Single Cache domain 2 41 190 4.1E-47 T 23-04-2016 IPR033480 Single Cache domain 2 VV93_RS14565 1125f162dc8fd11037cfb609204d2713 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 346 544 2.3E-46 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS06505 7d3c579a29077161e6f610ff8b522505 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 45.019 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 VV93_RS06505 7d3c579a29077161e6f610ff8b522505 257 Pfam PF00977 Histidine biosynthesis protein 5 239 2.0E-79 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 VV93_RS06505 7d3c579a29077161e6f610ff8b522505 257 Gene3D G3DSA:3.20.20.70 4 257 2.2E-89 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS06505 7d3c579a29077161e6f610ff8b522505 257 SUPERFAMILY SSF51366 1 256 9.42E-75 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VV93_RS06505 7d3c579a29077161e6f610ff8b522505 257 PANTHER PTHR21235 1 257 1.8E-119 T 23-04-2016 VV93_RS06505 7d3c579a29077161e6f610ff8b522505 257 PANTHER PTHR21235:SF2 1 257 1.8E-119 T 23-04-2016 VV93_RS06505 7d3c579a29077161e6f610ff8b522505 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 8.9E-115 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 4.8E-11 T 23-04-2016 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 4.8E-11 T 23-04-2016 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 4.8E-11 T 23-04-2016 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 5.4E-53 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.871 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 7.1E-40 T 23-04-2016 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 7.1E-40 T 23-04-2016 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 7.1E-40 T 23-04-2016 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 7.1E-40 T 23-04-2016 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 7.1E-40 T 23-04-2016 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 SUPERFAMILY SSF52021 4 142 9.68E-58 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 Gene3D G3DSA:3.40.50.880 154 377 2.4E-82 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 2.2E-149 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 Gene3D G3DSA:3.50.30.20 4 144 2.8E-63 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 SUPERFAMILY SSF52317 153 377 8.41E-64 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 SMART SM01097 3 133 2.1E-93 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 PANTHER PTHR11405 3 173 7.0E-253 T 23-04-2016 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 PANTHER PTHR11405 189 377 7.0E-253 T 23-04-2016 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.5E-5 T 23-04-2016 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.5E-5 T 23-04-2016 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.5E-5 T 23-04-2016 VV93_RS02875 3fb8ff16d4cceb550d45d555bf96cba3 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 4.5E-47 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VV93_RS09315 f44b6543aeff36923c0e154ba0eeb169 451 SUPERFAMILY SSF55874 291 438 1.83E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS09315 f44b6543aeff36923c0e154ba0eeb169 451 Gene3D G3DSA:3.30.565.10 292 440 1.9E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS09315 f44b6543aeff36923c0e154ba0eeb169 451 SUPERFAMILY SSF51206 3 133 1.7E-15 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like VV93_RS09315 f44b6543aeff36923c0e154ba0eeb169 451 Pfam PF00027 Cyclic nucleotide-binding domain 22 100 5.4E-9 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain VV93_RS09315 f44b6543aeff36923c0e154ba0eeb169 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 2.4E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS09315 f44b6543aeff36923c0e154ba0eeb169 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 2.4E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS09315 f44b6543aeff36923c0e154ba0eeb169 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 2.4E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS09315 f44b6543aeff36923c0e154ba0eeb169 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 2.4E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS09315 f44b6543aeff36923c0e154ba0eeb169 451 SMART SM00100 2 124 7.5E-4 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain VV93_RS09315 f44b6543aeff36923c0e154ba0eeb169 451 SMART SM00387 329 440 7.3E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS09315 f44b6543aeff36923c0e154ba0eeb169 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 439 1.0E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS09315 f44b6543aeff36923c0e154ba0eeb169 451 Gene3D G3DSA:2.60.120.10 20 130 7.8E-11 T 23-04-2016 IPR014710 RmlC-like jelly roll fold VV93_RS09315 f44b6543aeff36923c0e154ba0eeb169 451 PANTHER PTHR24423 265 446 1.7E-40 T 23-04-2016 VV93_RS09315 f44b6543aeff36923c0e154ba0eeb169 451 PANTHER PTHR24423 137 195 1.7E-40 T 23-04-2016 VV93_RS09315 f44b6543aeff36923c0e154ba0eeb169 451 PANTHER PTHR24423:SF445 265 446 1.7E-40 T 23-04-2016 VV93_RS09315 f44b6543aeff36923c0e154ba0eeb169 451 PANTHER PTHR24423:SF445 137 195 1.7E-40 T 23-04-2016 VV93_RS06900 3b6bc394e701fc12a2547164d5f2892d 761 SUPERFAMILY SSF47203 301 453 1.24E-20 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VV93_RS06900 3b6bc394e701fc12a2547164d5f2892d 761 PANTHER PTHR10909:SF283 32 474 2.1E-241 T 23-04-2016 VV93_RS06900 3b6bc394e701fc12a2547164d5f2892d 761 Gene3D G3DSA:1.20.140.10 290 448 5.0E-22 T 23-04-2016 VV93_RS06900 3b6bc394e701fc12a2547164d5f2892d 761 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 4.0E-9 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VV93_RS06900 3b6bc394e701fc12a2547164d5f2892d 761 Gene3D G3DSA:1.10.540.10 64 171 7.2E-27 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VV93_RS06900 3b6bc394e701fc12a2547164d5f2892d 761 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 67 173 5.8E-15 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VV93_RS06900 3b6bc394e701fc12a2547164d5f2892d 761 Gene3D G3DSA:2.40.110.10 178 289 5.7E-18 T 23-04-2016 VV93_RS06900 3b6bc394e701fc12a2547164d5f2892d 761 SUPERFAMILY SSF56645 65 296 1.1E-45 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 VV93_RS06900 3b6bc394e701fc12a2547164d5f2892d 761 PANTHER PTHR10909 32 474 2.1E-241 T 23-04-2016 VV93_RS06900 3b6bc394e701fc12a2547164d5f2892d 761 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 5.7E-110 T 23-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 VV93_RS06900 3b6bc394e701fc12a2547164d5f2892d 761 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 1.5E-9 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 Pfam PF00271 Helicase conserved C-terminal domain 1109 1155 6.5E-6 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 SMART SM00490 1060 1155 0.0013 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 SUPERFAMILY SSF52540 62 207 4.53E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 SUPERFAMILY SSF52540 295 389 4.53E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 PANTHER PTHR24031 720 776 2.8E-26 T 23-04-2016 VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 PANTHER PTHR24031 97 213 2.8E-26 T 23-04-2016 VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 PANTHER PTHR24031 301 387 2.8E-26 T 23-04-2016 VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 PANTHER PTHR24031 682 701 2.8E-26 T 23-04-2016 VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 PANTHER PTHR24031 1107 1182 2.8E-26 T 23-04-2016 VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 Pfam PF00270 DEAD/DEAH box helicase 100 187 1.8E-9 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 Gene3D G3DSA:3.40.50.300 294 388 2.2E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 Gene3D G3DSA:3.40.50.300 63 205 2.2E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 Pfam PF09369 Domain of unknown function (DUF1998) 1636 1707 9.6E-11 T 23-04-2016 IPR018973 DEAD/DEAH-box helicase, putative VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 Gene3D G3DSA:3.40.50.300 750 772 8.5E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 Gene3D G3DSA:3.40.50.300 1067 1174 8.5E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 PANTHER PTHR24031:SF249 720 776 2.8E-26 T 23-04-2016 VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 PANTHER PTHR24031:SF249 97 213 2.8E-26 T 23-04-2016 VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 PANTHER PTHR24031:SF249 301 387 2.8E-26 T 23-04-2016 VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 PANTHER PTHR24031:SF249 682 701 2.8E-26 T 23-04-2016 VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 PANTHER PTHR24031:SF249 1107 1182 2.8E-26 T 23-04-2016 VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 SMART SM00487 94 414 3.8E-14 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 SUPERFAMILY SSF52540 114 179 2.13E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03840 db1c45ec4fe6006783d45e882ce41666 1831 SUPERFAMILY SSF52540 1073 1185 2.13E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10890 75982410a5e4c2f06adc41b377d6f801 68 PANTHER PTHR37531 1 68 2.0E-23 T 23-04-2016 VV93_RS10890 75982410a5e4c2f06adc41b377d6f801 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 7.4E-17 T 23-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VV93_RS10890 75982410a5e4c2f06adc41b377d6f801 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 4.4E-20 T 23-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VV93_RS10890 75982410a5e4c2f06adc41b377d6f801 68 PANTHER PTHR37531:SF1 1 68 2.0E-23 T 23-04-2016 VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 SUPERFAMILY SSF54826 3 138 4.12E-56 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 23-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 PANTHER PTHR11902 1 428 1.2E-268 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 Hamap MF_00318 Enolase [eno]. 2 417 44.279 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 PIRSF PIRSF001400 1 430 1.6E-190 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 Gene3D G3DSA:3.30.390.10 3 126 2.1E-54 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 PRINTS PR00148 Enolase signature 317 328 3.97E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 PRINTS PR00148 Enolase signature 107 123 3.97E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 PRINTS PR00148 Enolase signature 340 354 3.97E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 PRINTS PR00148 Enolase signature 165 178 3.97E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 PRINTS PR00148 Enolase signature 369 386 3.97E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 PRINTS PR00148 Enolase signature 37 51 3.97E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 SMART SM01192 143 431 6.3E-212 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 Pfam PF03952 Enolase, N-terminal domain 4 134 2.3E-58 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 2.2E-206 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 Gene3D G3DSA:3.20.20.120 128 429 1.1E-134 T 23-04-2016 IPR029065 Enolase C-terminal domain-like VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 SUPERFAMILY SSF51604 143 428 2.69E-125 T 23-04-2016 IPR029065 Enolase C-terminal domain-like VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 1.4E-135 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VV93_RS12785 3fb335023432720a3fe5fe1093272e53 433 SMART SM01193 4 134 1.7E-92 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VV93_RS06355 5c55e61b130a5ea73ad8fae09fded28d 198 SUPERFAMILY SSF89392 20 197 2.63E-51 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX VV93_RS06355 5c55e61b130a5ea73ad8fae09fded28d 198 Gene3D G3DSA:2.50.20.10 20 197 1.3E-52 T 23-04-2016 VV93_RS06355 5c55e61b130a5ea73ad8fae09fded28d 198 PANTHER PTHR35869 4 198 3.1E-51 T 23-04-2016 VV93_RS06355 5c55e61b130a5ea73ad8fae09fded28d 198 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 29 185 1.8E-55 T 23-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VV93_RS06355 5c55e61b130a5ea73ad8fae09fded28d 198 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 5 196 31.24 T 23-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VV93_RS06355 5c55e61b130a5ea73ad8fae09fded28d 198 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 7 197 2.8E-64 T 23-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VV93_RS13235 f564d9628407888f2ad742a144303277 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 4.6E-48 T 23-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 VV93_RS13235 f564d9628407888f2ad742a144303277 440 SUPERFAMILY SSF56327 173 436 5.76E-92 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VV93_RS13235 f564d9628407888f2ad742a144303277 440 SUPERFAMILY SSF51735 5 170 3.2E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS13235 f564d9628407888f2ad742a144303277 440 PANTHER PTHR32092 3 439 8.9E-249 T 23-04-2016 VV93_RS13235 f564d9628407888f2ad742a144303277 440 Gene3D G3DSA:3.40.50.720 4 170 1.4E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS13235 f564d9628407888f2ad742a144303277 440 Gene3D G3DSA:3.90.110.10 171 435 1.8E-99 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VV93_RS13235 f564d9628407888f2ad742a144303277 440 PANTHER PTHR32092:SF5 3 439 8.9E-249 T 23-04-2016 VV93_RS13235 f564d9628407888f2ad742a144303277 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 3.7E-47 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV93_RS13235 f564d9628407888f2ad742a144303277 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 3.7E-47 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV93_RS13235 f564d9628407888f2ad742a144303277 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 3.7E-47 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV93_RS13235 f564d9628407888f2ad742a144303277 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 3.7E-47 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV93_RS13235 f564d9628407888f2ad742a144303277 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 3.7E-47 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV93_RS13235 f564d9628407888f2ad742a144303277 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 3.7E-47 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV93_RS13235 f564d9628407888f2ad742a144303277 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 3.7E-47 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV93_RS13235 f564d9628407888f2ad742a144303277 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 3.8E-60 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV93_RS07335 f497c538ece5a0f036e59c1888639df2 1042 SUPERFAMILY SSF109604 665 749 2.04E-7 T 23-04-2016 VV93_RS07335 f497c538ece5a0f036e59c1888639df2 1042 Gene3D G3DSA:1.10.3210.10 659 741 1.1E-5 T 23-04-2016 IPR006674 HD domain VV93_RS07335 f497c538ece5a0f036e59c1888639df2 1042 SMART SM00062 293 503 0.0056 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV93_RS07335 f497c538ece5a0f036e59c1888639df2 1042 SUPERFAMILY SSF109604 899 995 1.98E-7 T 23-04-2016 VV93_RS07335 f497c538ece5a0f036e59c1888639df2 1042 Gene3D G3DSA:3.40.190.10 291 376 1.9E-12 T 23-04-2016 VV93_RS07335 f497c538ece5a0f036e59c1888639df2 1042 Gene3D G3DSA:3.40.190.10 468 505 1.9E-12 T 23-04-2016 VV93_RS07335 f497c538ece5a0f036e59c1888639df2 1042 SMART SM00471 669 980 0.0014 T 23-04-2016 IPR003607 HD/PDEase domain VV93_RS07335 f497c538ece5a0f036e59c1888639df2 1042 Gene3D G3DSA:3.30.450.20 81 122 2.3E-13 T 23-04-2016 VV93_RS07335 f497c538ece5a0f036e59c1888639df2 1042 Gene3D G3DSA:3.30.450.20 168 225 2.3E-13 T 23-04-2016 VV93_RS07335 f497c538ece5a0f036e59c1888639df2 1042 Pfam PF13487 HD domain 897 962 7.8E-19 T 23-04-2016 VV93_RS07335 f497c538ece5a0f036e59c1888639df2 1042 SUPERFAMILY SSF53850 291 505 5.0E-20 T 23-04-2016 VV93_RS07335 f497c538ece5a0f036e59c1888639df2 1042 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 296 506 3.0E-17 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV93_RS07335 f497c538ece5a0f036e59c1888639df2 1042 Pfam PF00672 HAMP domain 577 645 3.2E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS07335 f497c538ece5a0f036e59c1888639df2 1042 SMART SM00304 596 649 0.0054 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS07235 cbeb1481c0ae67e3930690f0f2c54657 70 PANTHER PTHR11544 1 70 1.2E-41 T 23-04-2016 VV93_RS07235 cbeb1481c0ae67e3930690f0f2c54657 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 23-04-2016 IPR019844 Cold-shock conserved site VV93_RS07235 cbeb1481c0ae67e3930690f0f2c54657 70 SUPERFAMILY SSF50249 4 69 3.43E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS07235 cbeb1481c0ae67e3930690f0f2c54657 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 5.2E-31 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV93_RS07235 cbeb1481c0ae67e3930690f0f2c54657 70 PIRSF PIRSF002599 1 70 6.7E-26 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 VV93_RS07235 cbeb1481c0ae67e3930690f0f2c54657 70 PRINTS PR00050 Cold shock protein signature 28 37 3.4E-18 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV93_RS07235 cbeb1481c0ae67e3930690f0f2c54657 70 PRINTS PR00050 Cold shock protein signature 7 22 3.4E-18 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV93_RS07235 cbeb1481c0ae67e3930690f0f2c54657 70 PRINTS PR00050 Cold shock protein signature 43 61 3.4E-18 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV93_RS07235 cbeb1481c0ae67e3930690f0f2c54657 70 Gene3D G3DSA:2.40.50.140 5 69 1.9E-31 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS07235 cbeb1481c0ae67e3930690f0f2c54657 70 SMART SM00357 6 70 1.1E-31 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1081 0.0 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 4.0E-21 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 SUPERFAMILY SSF52540 524 783 4.76E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 SMART SM01058 479 576 6.7E-50 T 23-04-2016 IPR003711 CarD-like/TRCF domain VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 SMART SM00490 826 910 5.3E-19 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 6.1E-24 T 23-04-2016 IPR003711 CarD-like/TRCF domain VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 Pfam PF03461 TRCF domain 1010 1101 3.6E-28 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 SMART SM00487 600 790 2.5E-34 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 Gene3D G3DSA:3.30.2060.10 132 208 1.2E-15 T 23-04-2016 VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 Gene3D G3DSA:3.40.50.300 593 786 3.3E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 28 1141 28.84 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 SUPERFAMILY SSF52540 352 466 7.97E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 SUPERFAMILY SSF52540 11 340 7.97E-99 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 SMART SM00982 1008 1108 7.2E-47 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 SUPERFAMILY SSF52540 782 990 5.59E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 SUPERFAMILY SSF143517 998 1146 8.76E-43 T 23-04-2016 VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 SUPERFAMILY SSF141259 470 548 7.98E-24 T 23-04-2016 IPR003711 CarD-like/TRCF domain VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 Pfam PF00271 Helicase conserved C-terminal domain 806 909 1.4E-16 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 PANTHER PTHR14025 384 1151 0.0 T 23-04-2016 VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 Gene3D G3DSA:3.40.50.300 787 963 4.6E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10485 638904f02c432b85c814ad4de9b320c8 1153 PANTHER PTHR14025:SF21 384 1151 0.0 T 23-04-2016 VV93_RS06895 ebd5b7746f4717570985eac7c6c012dd 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.4E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV93_RS06895 ebd5b7746f4717570985eac7c6c012dd 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.4E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV93_RS06895 ebd5b7746f4717570985eac7c6c012dd 208 PANTHER PTHR30055 4 174 1.5E-46 T 23-04-2016 VV93_RS06895 ebd5b7746f4717570985eac7c6c012dd 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 1.1E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV93_RS06895 ebd5b7746f4717570985eac7c6c012dd 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VV93_RS06895 ebd5b7746f4717570985eac7c6c012dd 208 SUPERFAMILY SSF48498 80 207 2.71E-41 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VV93_RS06895 ebd5b7746f4717570985eac7c6c012dd 208 SUPERFAMILY SSF46689 3 77 4.41E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS06895 ebd5b7746f4717570985eac7c6c012dd 208 Gene3D G3DSA:1.10.357.10 3 206 8.8E-37 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VV93_RS06895 ebd5b7746f4717570985eac7c6c012dd 208 PANTHER PTHR30055:SF73 4 174 1.5E-46 T 23-04-2016 VV93_RS14945 4a5925d2a7b7986246277d68ce66631e 461 Pfam PF07731 Multicopper oxidase 359 460 7.4E-26 T 23-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 VV93_RS14945 4a5925d2a7b7986246277d68ce66631e 461 SUPERFAMILY SSF49503 313 460 6.27E-34 T 23-04-2016 IPR008972 Cupredoxin VV93_RS14945 4a5925d2a7b7986246277d68ce66631e 461 SUPERFAMILY SSF49503 160 281 2.06E-16 T 23-04-2016 IPR008972 Cupredoxin VV93_RS14945 4a5925d2a7b7986246277d68ce66631e 461 Gene3D G3DSA:2.60.40.420 34 155 4.7E-36 T 23-04-2016 IPR008972 Cupredoxin VV93_RS14945 4a5925d2a7b7986246277d68ce66631e 461 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 26 2.7E-5 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VV93_RS14945 4a5925d2a7b7986246277d68ce66631e 461 Pfam PF07732 Multicopper oxidase 46 157 4.1E-39 T 23-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 VV93_RS14945 4a5925d2a7b7986246277d68ce66631e 461 Pfam PF00394 Multicopper oxidase 172 284 9.6E-7 T 23-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 VV93_RS14945 4a5925d2a7b7986246277d68ce66631e 461 SUPERFAMILY SSF49503 32 156 4.08E-39 T 23-04-2016 IPR008972 Cupredoxin VV93_RS14945 4a5925d2a7b7986246277d68ce66631e 461 Gene3D G3DSA:2.60.40.420 340 460 2.1E-35 T 23-04-2016 IPR008972 Cupredoxin VV93_RS14945 4a5925d2a7b7986246277d68ce66631e 461 Gene3D G3DSA:2.60.40.420 156 274 1.3E-18 T 23-04-2016 IPR008972 Cupredoxin VV93_RS14945 4a5925d2a7b7986246277d68ce66631e 461 PANTHER PTHR11709 53 461 1.1E-82 T 23-04-2016 VV93_RS14945 4a5925d2a7b7986246277d68ce66631e 461 ProSitePatterns PS00080 Multicopper oxidases signature 2. 443 454 - T 23-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 VV93_RS14945 4a5925d2a7b7986246277d68ce66631e 461 PANTHER PTHR11709:SF33 53 461 1.1E-82 T 23-04-2016 VV93_RS13255 067d2a9d3a32db299a3769c575a085a9 427 Gene3D G3DSA:2.10.10.20 337 377 7.1E-16 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS13255 067d2a9d3a32db299a3769c575a085a9 427 Gene3D G3DSA:2.10.10.20 383 426 5.4E-15 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS13255 067d2a9d3a32db299a3769c575a085a9 427 PANTHER PTHR10587 28 97 7.9E-12 T 23-04-2016 VV93_RS13255 067d2a9d3a32db299a3769c575a085a9 427 SUPERFAMILY SSF51055 383 426 2.94E-13 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS13255 067d2a9d3a32db299a3769c575a085a9 427 Pfam PF02839 Carbohydrate binding domain 333 375 1.5E-5 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS13255 067d2a9d3a32db299a3769c575a085a9 427 Pfam PF01522 Polysaccharide deacetylase 23 129 8.0E-14 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 VV93_RS13255 067d2a9d3a32db299a3769c575a085a9 427 SUPERFAMILY SSF51055 334 377 2.75E-13 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS13255 067d2a9d3a32db299a3769c575a085a9 427 Gene3D G3DSA:3.20.20.370 166 336 3.9E-27 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 VV93_RS13255 067d2a9d3a32db299a3769c575a085a9 427 Gene3D G3DSA:3.20.20.370 24 97 3.9E-27 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 VV93_RS13255 067d2a9d3a32db299a3769c575a085a9 427 SMART SM00495 332 378 2.2E-4 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS13255 067d2a9d3a32db299a3769c575a085a9 427 SMART SM00495 381 427 5.0 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS13255 067d2a9d3a32db299a3769c575a085a9 427 SUPERFAMILY SSF88713 24 102 5.93E-27 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VV93_RS13255 067d2a9d3a32db299a3769c575a085a9 427 SUPERFAMILY SSF88713 190 237 5.93E-27 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VV93_RS13255 067d2a9d3a32db299a3769c575a085a9 427 SUPERFAMILY SSF88713 130 147 5.93E-27 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VV93_RS13255 067d2a9d3a32db299a3769c575a085a9 427 SUPERFAMILY SSF88713 270 338 5.93E-27 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VV93_RS23090 c30a1b6bc5c6b3cbf7a02f302cb20f26 178 PANTHER PTHR30093 1 70 2.0E-22 T 23-04-2016 VV93_RS23090 c30a1b6bc5c6b3cbf7a02f302cb20f26 178 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS23090 c30a1b6bc5c6b3cbf7a02f302cb20f26 178 PANTHER PTHR30093:SF7 1 70 2.0E-22 T 23-04-2016 VV93_RS23090 c30a1b6bc5c6b3cbf7a02f302cb20f26 178 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 2.2E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS23090 c30a1b6bc5c6b3cbf7a02f302cb20f26 178 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 24 1.4E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS23090 c30a1b6bc5c6b3cbf7a02f302cb20f26 178 Gene3D G3DSA:3.30.700.10 7 56 3.4E-5 T 23-04-2016 VV93_RS23090 c30a1b6bc5c6b3cbf7a02f302cb20f26 178 SUPERFAMILY SSF54523 7 64 1.49E-12 T 23-04-2016 VV93_RS06850 a2545256e908cd58d0d9d361877b933e 233 Pfam PF01479 S4 domain 1 44 2.6E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS06850 a2545256e908cd58d0d9d361877b933e 233 PANTHER PTHR21600 1 233 9.4E-72 T 23-04-2016 VV93_RS06850 a2545256e908cd58d0d9d361877b933e 233 SUPERFAMILY SSF55120 60 228 4.0E-43 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS06850 a2545256e908cd58d0d9d361877b933e 233 Gene3D G3DSA:3.10.290.10 1 63 1.8E-20 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS06850 a2545256e908cd58d0d9d361877b933e 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VV93_RS06850 a2545256e908cd58d0d9d361877b933e 233 SMART SM00363 1 59 2.4E-5 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS06850 a2545256e908cd58d0d9d361877b933e 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 2.9E-49 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VV93_RS06850 a2545256e908cd58d0d9d361877b933e 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 4.2E-17 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS06850 a2545256e908cd58d0d9d361877b933e 233 PANTHER PTHR21600:SF19 1 233 9.4E-72 T 23-04-2016 VV93_RS06850 a2545256e908cd58d0d9d361877b933e 233 SUPERFAMILY SSF55174 1 56 1.15E-11 T 23-04-2016 VV93_RS00075 aaac658b2652fd2a2400cc8d0726bf6f 313 Gene3D G3DSA:3.40.190.10 175 269 4.6E-21 T 23-04-2016 VV93_RS00075 aaac658b2652fd2a2400cc8d0726bf6f 313 PANTHER PTHR30118 2 308 4.5E-75 T 23-04-2016 VV93_RS00075 aaac658b2652fd2a2400cc8d0726bf6f 313 Pfam PF03466 LysR substrate binding domain 99 299 7.8E-23 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS00075 aaac658b2652fd2a2400cc8d0726bf6f 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 7.0E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS00075 aaac658b2652fd2a2400cc8d0726bf6f 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.8E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS00075 aaac658b2652fd2a2400cc8d0726bf6f 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.8E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS00075 aaac658b2652fd2a2400cc8d0726bf6f 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.8E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS00075 aaac658b2652fd2a2400cc8d0726bf6f 313 Gene3D G3DSA:1.10.10.10 6 89 2.2E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS00075 aaac658b2652fd2a2400cc8d0726bf6f 313 SUPERFAMILY SSF53850 92 298 1.7E-39 T 23-04-2016 VV93_RS00075 aaac658b2652fd2a2400cc8d0726bf6f 313 PANTHER PTHR30118:SF8 2 308 4.5E-75 T 23-04-2016 VV93_RS00075 aaac658b2652fd2a2400cc8d0726bf6f 313 SUPERFAMILY SSF46785 7 87 6.17E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS00075 aaac658b2652fd2a2400cc8d0726bf6f 313 Gene3D G3DSA:3.40.190.10 92 174 2.3E-26 T 23-04-2016 VV93_RS00075 aaac658b2652fd2a2400cc8d0726bf6f 313 Gene3D G3DSA:3.40.190.10 274 302 2.3E-26 T 23-04-2016 VV93_RS03640 44e380e6fcf26986bf007eedb440678c 340 Gene3D G3DSA:3.30.70.270 182 333 2.6E-39 T 23-04-2016 VV93_RS03640 44e380e6fcf26986bf007eedb440678c 340 Pfam PF00990 Diguanylate cyclase, GGDEF domain 181 333 5.1E-34 T 23-04-2016 IPR000160 GGDEF domain VV93_RS03640 44e380e6fcf26986bf007eedb440678c 340 SUPERFAMILY SSF55781 7 168 4.58E-28 T 23-04-2016 IPR029016 GAF domain-like VV93_RS03640 44e380e6fcf26986bf007eedb440678c 340 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 181 333 1.9E-33 T 23-04-2016 IPR000160 GGDEF domain VV93_RS03640 44e380e6fcf26986bf007eedb440678c 340 PANTHER PTHR10799:SF710 213 333 1.1E-21 T 23-04-2016 VV93_RS03640 44e380e6fcf26986bf007eedb440678c 340 PANTHER PTHR10799:SF710 95 172 1.1E-21 T 23-04-2016 VV93_RS03640 44e380e6fcf26986bf007eedb440678c 340 PANTHER PTHR10799 213 333 1.1E-21 T 23-04-2016 VV93_RS03640 44e380e6fcf26986bf007eedb440678c 340 PANTHER PTHR10799 95 172 1.1E-21 T 23-04-2016 VV93_RS03640 44e380e6fcf26986bf007eedb440678c 340 SUPERFAMILY SSF55073 185 332 2.28E-35 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS03640 44e380e6fcf26986bf007eedb440678c 340 Gene3D G3DSA:3.30.450.40 11 176 1.8E-22 T 23-04-2016 IPR029016 GAF domain-like VV93_RS03640 44e380e6fcf26986bf007eedb440678c 340 SMART SM00267 169 337 2.6E-36 T 23-04-2016 IPR000160 GGDEF domain VV93_RS03640 44e380e6fcf26986bf007eedb440678c 340 SMART SM00065 25 177 5.4E-13 T 23-04-2016 IPR003018 GAF domain GO:0005515 VV93_RS03640 44e380e6fcf26986bf007eedb440678c 340 Pfam PF13185 GAF domain 26 168 1.0E-16 T 23-04-2016 IPR003018 GAF domain GO:0005515 VV93_RS01635 35a602992beb789f23230ba4dce1ea96 313 Gene3D G3DSA:3.40.50.720 2 176 1.2E-18 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01635 35a602992beb789f23230ba4dce1ea96 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 309 1.3E-126 T 23-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 VV93_RS01635 35a602992beb789f23230ba4dce1ea96 313 Gene3D G3DSA:3.90.25.10 177 294 1.5E-37 T 23-04-2016 VV93_RS01635 35a602992beb789f23230ba4dce1ea96 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 54.734 T 23-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 VV93_RS01635 35a602992beb789f23230ba4dce1ea96 313 SUPERFAMILY SSF51735 1 308 1.18E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01635 35a602992beb789f23230ba4dce1ea96 313 PANTHER PTHR10366 1 309 2.4E-115 T 23-04-2016 VV93_RS01635 35a602992beb789f23230ba4dce1ea96 313 PANTHER PTHR10366:SF469 1 309 2.4E-115 T 23-04-2016 VV93_RS01635 35a602992beb789f23230ba4dce1ea96 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 7.3E-45 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 VV93_RS08040 3e7c5485d75194664e2e23d9eb81e890 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 2.4E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS08040 3e7c5485d75194664e2e23d9eb81e890 256 PANTHER PTHR30222 1 256 1.4E-162 T 23-04-2016 VV93_RS08040 3e7c5485d75194664e2e23d9eb81e890 256 SUPERFAMILY SSF161098 4 254 7.1E-54 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS08040 3e7c5485d75194664e2e23d9eb81e890 256 Gene3D G3DSA:1.10.3720.10 3 254 1.7E-55 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS08040 3e7c5485d75194664e2e23d9eb81e890 256 PANTHER PTHR30222:SF6 1 256 1.4E-162 T 23-04-2016 VV93_RS03050 8451c1d4d8472a37fd3ef5a0489c9579 172 SUPERFAMILY SSF52218 1 169 2.35E-48 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS03050 8451c1d4d8472a37fd3ef5a0489c9579 172 PANTHER PTHR19384 1 119 3.4E-73 T 23-04-2016 VV93_RS03050 8451c1d4d8472a37fd3ef5a0489c9579 172 PANTHER PTHR19384 141 167 3.4E-73 T 23-04-2016 VV93_RS03050 8451c1d4d8472a37fd3ef5a0489c9579 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 169 1.9E-67 T 23-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VV93_RS03050 8451c1d4d8472a37fd3ef5a0489c9579 172 PIRSF PIRSF038996 1 172 4.9E-58 T 23-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VV93_RS03050 8451c1d4d8472a37fd3ef5a0489c9579 172 Pfam PF00258 Flavodoxin 5 160 4.0E-28 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VV93_RS03050 8451c1d4d8472a37fd3ef5a0489c9579 172 PANTHER PTHR19384:SF73 1 119 3.4E-73 T 23-04-2016 VV93_RS03050 8451c1d4d8472a37fd3ef5a0489c9579 172 PANTHER PTHR19384:SF73 141 167 3.4E-73 T 23-04-2016 VV93_RS03050 8451c1d4d8472a37fd3ef5a0489c9579 172 Gene3D G3DSA:3.40.50.360 1 168 1.8E-58 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS07280 cb0f16b707fa84ff91e76191779c1601 578 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 370 575 1.4E-44 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS07280 cb0f16b707fa84ff91e76191779c1601 578 PANTHER PTHR32089:SF55 193 578 1.8E-170 T 23-04-2016 VV93_RS07280 cb0f16b707fa84ff91e76191779c1601 578 SMART SM00283 315 576 3.5E-57 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS07280 cb0f16b707fa84ff91e76191779c1601 578 SUPERFAMILY SSF58104 268 577 3.53E-72 T 23-04-2016 VV93_RS07280 cb0f16b707fa84ff91e76191779c1601 578 SMART SM00304 246 300 1.4E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS07280 cb0f16b707fa84ff91e76191779c1601 578 Pfam PF00672 HAMP domain 228 297 1.7E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS07280 cb0f16b707fa84ff91e76191779c1601 578 PANTHER PTHR32089 193 578 1.8E-170 T 23-04-2016 VV93_RS07280 cb0f16b707fa84ff91e76191779c1601 578 Gene3D G3DSA:1.10.287.950 331 545 9.1E-54 T 23-04-2016 VV93_RS04460 7d3597cefa7e42b470340c37b6bb8107 347 PANTHER PTHR21600:SF24 1 300 6.2E-150 T 23-04-2016 VV93_RS04460 7d3597cefa7e42b470340c37b6bb8107 347 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VV93_RS04460 7d3597cefa7e42b470340c37b6bb8107 347 Gene3D G3DSA:3.10.290.10 8 68 2.1E-25 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS04460 7d3597cefa7e42b470340c37b6bb8107 347 Pfam PF01479 S4 domain 8 52 7.4E-11 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS04460 7d3597cefa7e42b470340c37b6bb8107 347 SUPERFAMILY SSF55120 66 227 1.04E-38 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS04460 7d3597cefa7e42b470340c37b6bb8107 347 Pfam PF00849 RNA pseudouridylate synthase 67 193 1.6E-13 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS04460 7d3597cefa7e42b470340c37b6bb8107 347 SMART SM00363 7 65 2.6E-11 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS04460 7d3597cefa7e42b470340c37b6bb8107 347 SUPERFAMILY SSF55174 8 61 1.18E-14 T 23-04-2016 VV93_RS04460 7d3597cefa7e42b470340c37b6bb8107 347 PANTHER PTHR21600 1 300 6.2E-150 T 23-04-2016 VV93_RS04460 7d3597cefa7e42b470340c37b6bb8107 347 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 224 1.4E-47 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VV93_RS14395 37b49aa0f49ed93a96b39f62411c9755 467 Pfam PF01145 SPFH domain / Band 7 family 45 296 3.4E-37 T 23-04-2016 IPR001107 Band 7 domain VV93_RS14335 02e9025bcbcda04d8fac48d21256ca1d 155 PANTHER PTHR36918:SF1 1 153 4.2E-81 T 23-04-2016 VV93_RS14335 02e9025bcbcda04d8fac48d21256ca1d 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 1.9E-38 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VV93_RS14335 02e9025bcbcda04d8fac48d21256ca1d 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 1.9E-38 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VV93_RS14335 02e9025bcbcda04d8fac48d21256ca1d 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 1.9E-38 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VV93_RS14335 02e9025bcbcda04d8fac48d21256ca1d 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 1.9E-38 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VV93_RS14335 02e9025bcbcda04d8fac48d21256ca1d 155 SUPERFAMILY SSF54611 4 143 2.18E-51 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VV93_RS14335 02e9025bcbcda04d8fac48d21256ca1d 155 Gene3D G3DSA:3.10.420.10 7 154 1.1E-59 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VV93_RS14335 02e9025bcbcda04d8fac48d21256ca1d 155 Pfam PF02556 Preprotein translocase subunit SecB 7 146 1.2E-54 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VV93_RS14335 02e9025bcbcda04d8fac48d21256ca1d 155 PANTHER PTHR36918 1 153 4.2E-81 T 23-04-2016 VV93_RS14335 02e9025bcbcda04d8fac48d21256ca1d 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 8 147 2.6E-58 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VV93_RS14335 02e9025bcbcda04d8fac48d21256ca1d 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 31.672 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VV93_RS12615 cc666c60f9d932bd816b6eb2013c9b0d 264 Pfam PF01578 Cytochrome C assembly protein 37 262 1.8E-45 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VV93_RS12615 cc666c60f9d932bd816b6eb2013c9b0d 264 PANTHER PTHR38034 3 264 4.5E-96 T 23-04-2016 VV93_RS18130 c3f2119c0aaff4c219a296d6a98d523e 201 SUPERFAMILY SSF52833 133 201 5.72E-17 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS18130 c3f2119c0aaff4c219a296d6a98d523e 201 Gene3D G3DSA:3.10.450.70 56 113 2.1E-21 T 23-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal VV93_RS18130 c3f2119c0aaff4c219a296d6a98d523e 201 Gene3D G3DSA:3.40.30.10 139 201 7.1E-18 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS18130 c3f2119c0aaff4c219a296d6a98d523e 201 SUPERFAMILY SSF54423 57 113 1.16E-13 T 23-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VV93_RS18130 c3f2119c0aaff4c219a296d6a98d523e 201 Pfam PF10411 Disulfide bond isomerase protein N-terminus 61 111 6.3E-13 T 23-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VV93_RS18130 c3f2119c0aaff4c219a296d6a98d523e 201 PANTHER PTHR35272 16 201 1.4E-57 T 23-04-2016 VV93_RS18130 c3f2119c0aaff4c219a296d6a98d523e 201 Pfam PF13098 Thioredoxin-like domain 143 201 7.8E-9 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS18130 c3f2119c0aaff4c219a296d6a98d523e 201 PANTHER PTHR35272:SF3 16 201 1.4E-57 T 23-04-2016 VV93_RS01800 2ff5d8db50135fc9335f30d0c18f2254 209 Gene3D G3DSA:2.40.30.10 3 32 1.0E-10 T 23-04-2016 VV93_RS01800 2ff5d8db50135fc9335f30d0c18f2254 209 Gene3D G3DSA:2.40.30.10 158 207 1.0E-10 T 23-04-2016 VV93_RS01800 2ff5d8db50135fc9335f30d0c18f2254 209 PANTHER PTHR11229 1 208 4.7E-125 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01800 2ff5d8db50135fc9335f30d0c18f2254 209 Pfam PF00297 Ribosomal protein L3 49 182 8.7E-16 T 23-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01800 2ff5d8db50135fc9335f30d0c18f2254 209 Gene3D G3DSA:4.10.960.10 77 157 2.7E-38 T 23-04-2016 VV93_RS01800 2ff5d8db50135fc9335f30d0c18f2254 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.03 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01800 2ff5d8db50135fc9335f30d0c18f2254 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 1.2E-94 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01800 2ff5d8db50135fc9335f30d0c18f2254 209 SUPERFAMILY SSF50447 1 208 8.65E-84 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain VV93_RS01800 2ff5d8db50135fc9335f30d0c18f2254 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 23-04-2016 IPR019926 Ribosomal protein L3, conserved site VV93_RS09470 367337b2848cdbb90f043b10b3245153 625 PANTHER PTHR11911 144 450 6.3E-43 T 23-04-2016 VV93_RS09470 367337b2848cdbb90f043b10b3245153 625 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 474 618 7.7E-47 T 23-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VV93_RS09470 367337b2848cdbb90f043b10b3245153 625 SUPERFAMILY SSF54631 146 275 4.04E-26 T 23-04-2016 VV93_RS09470 367337b2848cdbb90f043b10b3245153 625 Pfam PF00027 Cyclic nucleotide-binding domain 37 119 7.1E-14 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain VV93_RS09470 367337b2848cdbb90f043b10b3245153 625 Pfam PF03445 Putative nucleotidyltransferase DUF294 301 438 1.7E-45 T 23-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VV93_RS09470 367337b2848cdbb90f043b10b3245153 625 SMART SM00100 17 134 1.6E-8 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain VV93_RS09470 367337b2848cdbb90f043b10b3245153 625 SMART SM00116 159 212 0.22 T 23-04-2016 IPR000644 CBS domain VV93_RS09470 367337b2848cdbb90f043b10b3245153 625 SMART SM00116 229 276 1.4E-7 T 23-04-2016 IPR000644 CBS domain VV93_RS09470 367337b2848cdbb90f043b10b3245153 625 PANTHER PTHR11911:SF110 144 450 6.3E-43 T 23-04-2016 VV93_RS09470 367337b2848cdbb90f043b10b3245153 625 Pfam PF00571 CBS domain 222 274 1.1E-9 T 23-04-2016 IPR000644 CBS domain VV93_RS09470 367337b2848cdbb90f043b10b3245153 625 Pfam PF00571 CBS domain 153 210 7.9E-8 T 23-04-2016 IPR000644 CBS domain VV93_RS09470 367337b2848cdbb90f043b10b3245153 625 Gene3D G3DSA:2.60.120.10 4 138 6.3E-22 T 23-04-2016 IPR014710 RmlC-like jelly roll fold VV93_RS09470 367337b2848cdbb90f043b10b3245153 625 Gene3D G3DSA:3.10.580.10 151 277 7.9E-30 T 23-04-2016 VV93_RS09470 367337b2848cdbb90f043b10b3245153 625 SUPERFAMILY SSF51206 5 135 2.09E-25 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like VV93_RS01670 10033594d29f501bba569d36f36fac77 378 Gene3D G3DSA:1.20.5.70 345 378 2.3E-20 T 23-04-2016 VV93_RS01670 10033594d29f501bba569d36f36fac77 378 Gene3D G3DSA:3.10.560.10 166 245 2.1E-29 T 23-04-2016 VV93_RS01670 10033594d29f501bba569d36f36fac77 378 PANTHER PTHR33619 22 377 1.5E-71 T 23-04-2016 VV93_RS01670 10033594d29f501bba569d36f36fac77 378 Pfam PF02563 Polysaccharide biosynthesis/export protein 82 166 2.6E-26 T 23-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VV93_RS01670 10033594d29f501bba569d36f36fac77 378 Gene3D G3DSA:3.30.1950.10 90 165 1.7E-31 T 23-04-2016 VV93_RS01670 10033594d29f501bba569d36f36fac77 378 Gene3D G3DSA:3.10.560.10 246 343 4.5E-33 T 23-04-2016 VV93_RS01670 10033594d29f501bba569d36f36fac77 378 PANTHER PTHR33619:SF3 22 377 1.5E-71 T 23-04-2016 VV93_RS01670 10033594d29f501bba569d36f36fac77 378 Pfam PF10531 SLBB domain 257 303 5.6E-6 T 23-04-2016 IPR019554 Soluble ligand binding domain VV93_RS01670 10033594d29f501bba569d36f36fac77 378 Pfam PF10531 SLBB domain 174 222 2.9E-9 T 23-04-2016 IPR019554 Soluble ligand binding domain VV93_RS12110 6689aab0f0e5ea4d2052c8377568435d 265 SUPERFAMILY SSF51556 1 263 7.38E-69 T 23-04-2016 IPR032466 Metal-dependent hydrolase VV93_RS12110 6689aab0f0e5ea4d2052c8377568435d 265 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 198 214 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VV93_RS12110 6689aab0f0e5ea4d2052c8377568435d 265 Gene3D G3DSA:3.20.20.140 1 263 7.6E-69 T 23-04-2016 VV93_RS12110 6689aab0f0e5ea4d2052c8377568435d 265 Pfam PF01026 TatD related DNase 4 262 2.4E-56 T 23-04-2016 IPR001130 TatD family GO:0016788 VV93_RS12110 6689aab0f0e5ea4d2052c8377568435d 265 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VV93_RS12110 6689aab0f0e5ea4d2052c8377568435d 265 PANTHER PTHR10060 1 265 1.2E-79 T 23-04-2016 IPR001130 TatD family GO:0016788 VV93_RS12110 6689aab0f0e5ea4d2052c8377568435d 265 PIRSF PIRSF005902 1 265 7.0E-60 T 23-04-2016 IPR001130 TatD family GO:0016788 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 Gene3D G3DSA:2.60.40.320 602 702 4.2E-22 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 SMART SM01038 728 999 2.7E-128 T 23-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 SUPERFAMILY SSF74650 715 1001 3.77E-87 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 SUPERFAMILY SSF49303 209 319 3.7E-25 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 321 605 4.4E-115 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 44 204 4.6E-46 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 SUPERFAMILY SSF49303 613 706 5.28E-19 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 Pfam PF00703 Glycosyl hydrolases family 2 209 319 2.5E-18 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 Gene3D G3DSA:2.60.120.260 2 195 2.9E-71 T 23-04-2016 IPR008979 Galactose-binding domain-like VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 SUPERFAMILY SSF51445 321 599 2.26E-85 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 436 450 - T 23-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 Pfam PF02929 Beta galactosidase small chain 730 998 1.6E-70 T 23-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 PANTHER PTHR10066:SF72 2 552 0.0 T 23-04-2016 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 Pfam PF16353 Domain of unknown function(DUF4981) 616 700 4.4E-13 T 23-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 371 396 - T 23-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 PANTHER PTHR10066:SF72 570 1003 0.0 T 23-04-2016 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 330 344 4.7E-32 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 4.7E-32 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 361 379 4.7E-32 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 507 522 4.7E-32 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 436 451 4.7E-32 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 SUPERFAMILY SSF49785 2 205 4.68E-61 T 23-04-2016 IPR008979 Galactose-binding domain-like VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 PANTHER PTHR10066 2 552 0.0 T 23-04-2016 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 PANTHER PTHR10066 570 1003 0.0 T 23-04-2016 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 Gene3D G3DSA:2.60.40.320 196 319 4.1E-32 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 Gene3D G3DSA:2.70.98.10 715 1000 4.5E-90 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 VV93_RS11900 c0d09679f54922f98aa2f5e072992867 1032 Gene3D G3DSA:3.20.20.80 321 599 2.2E-93 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VV93_RS10730 d49f707f383e829f6dad93dc1e5b06a2 291 Gene3D G3DSA:3.40.190.10 177 257 1.8E-17 T 23-04-2016 VV93_RS10730 d49f707f383e829f6dad93dc1e5b06a2 291 PANTHER PTHR30537:SF19 1 290 9.0E-158 T 23-04-2016 VV93_RS10730 d49f707f383e829f6dad93dc1e5b06a2 291 Gene3D G3DSA:3.40.190.10 91 176 1.3E-21 T 23-04-2016 VV93_RS10730 d49f707f383e829f6dad93dc1e5b06a2 291 SUPERFAMILY SSF46785 1 83 1.04E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS10730 d49f707f383e829f6dad93dc1e5b06a2 291 PANTHER PTHR30537 1 290 9.0E-158 T 23-04-2016 VV93_RS10730 d49f707f383e829f6dad93dc1e5b06a2 291 Gene3D G3DSA:1.10.10.10 1 82 1.2E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS10730 d49f707f383e829f6dad93dc1e5b06a2 291 SUPERFAMILY SSF53850 89 287 1.38E-37 T 23-04-2016 VV93_RS10730 d49f707f383e829f6dad93dc1e5b06a2 291 Pfam PF03466 LysR substrate binding domain 88 285 1.8E-39 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS10730 d49f707f383e829f6dad93dc1e5b06a2 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.9E-13 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS07755 985ca56648434b4114b9164a323baf00 420 Gene3D G3DSA:3.90.10.10 208 249 4.4E-5 T 23-04-2016 VV93_RS07755 985ca56648434b4114b9164a323baf00 420 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 12 404 5.0E-104 T 23-04-2016 IPR005219 Conserved hypothetical protein CHP00155 VV93_RS07755 985ca56648434b4114b9164a323baf00 420 SUPERFAMILY SSF48695 203 249 4.19E-5 T 23-04-2016 IPR011031 Multihaem cytochrome VV93_RS07755 985ca56648434b4114b9164a323baf00 420 PANTHER PTHR30462:SF1 8 410 1.8E-184 T 23-04-2016 VV93_RS07755 985ca56648434b4114b9164a323baf00 420 PANTHER PTHR30462 8 410 1.8E-184 T 23-04-2016 VV93_RS07755 985ca56648434b4114b9164a323baf00 420 Pfam PF04403 Paraquat-inducible protein A 250 406 1.1E-47 T 23-04-2016 IPR007498 Paraquat-inducible protein A VV93_RS07755 985ca56648434b4114b9164a323baf00 420 Pfam PF04403 Paraquat-inducible protein A 56 207 2.9E-35 T 23-04-2016 IPR007498 Paraquat-inducible protein A VV93_RS05625 87f719ca7edd4a407c832fa01ac456f0 891 Gene3D G3DSA:3.40.309.10 309 405 4.0E-27 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VV93_RS05625 87f719ca7edd4a407c832fa01ac456f0 891 Gene3D G3DSA:3.40.309.10 226 273 4.0E-27 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VV93_RS05625 87f719ca7edd4a407c832fa01ac456f0 891 PIRSF PIRSF000111 1 865 0.0 T 23-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 VV93_RS05625 87f719ca7edd4a407c832fa01ac456f0 891 Gene3D G3DSA:1.20.1090.10 643 863 4.7E-68 T 23-04-2016 VV93_RS05625 87f719ca7edd4a407c832fa01ac456f0 891 PANTHER PTHR11496 361 866 0.0 T 23-04-2016 VV93_RS05625 87f719ca7edd4a407c832fa01ac456f0 891 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 849 1.1E-112 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 VV93_RS05625 87f719ca7edd4a407c832fa01ac456f0 891 SUPERFAMILY SSF56796 452 863 1.07E-114 T 23-04-2016 VV93_RS05625 87f719ca7edd4a407c832fa01ac456f0 891 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 23-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VV93_RS05625 87f719ca7edd4a407c832fa01ac456f0 891 PANTHER PTHR11496:SF79 361 866 0.0 T 23-04-2016 VV93_RS05625 87f719ca7edd4a407c832fa01ac456f0 891 Gene3D G3DSA:3.40.50.1970 451 642 2.3E-60 T 23-04-2016 VV93_RS05625 87f719ca7edd4a407c832fa01ac456f0 891 Pfam PF00171 Aldehyde dehydrogenase family 5 312 8.5E-24 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VV93_RS05625 87f719ca7edd4a407c832fa01ac456f0 891 SUPERFAMILY SSF53720 6 454 1.01E-83 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VV93_RS05625 87f719ca7edd4a407c832fa01ac456f0 891 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 23-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VV93_RS05625 87f719ca7edd4a407c832fa01ac456f0 891 Gene3D G3DSA:3.40.605.10 2 225 2.8E-23 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VV93_RS15245 bac15505f79bee19563dd39dfaa0c3e4 211 PANTHER PTHR31760:SF0 1 206 2.2E-83 T 23-04-2016 VV93_RS15245 bac15505f79bee19563dd39dfaa0c3e4 211 PIRSF PIRSF003078 1 211 3.8E-60 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VV93_RS15245 bac15505f79bee19563dd39dfaa0c3e4 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 3.0E-58 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VV93_RS15245 bac15505f79bee19563dd39dfaa0c3e4 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.83 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VV93_RS15245 bac15505f79bee19563dd39dfaa0c3e4 211 Gene3D G3DSA:3.40.50.150 6 209 1.0E-70 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS15245 bac15505f79bee19563dd39dfaa0c3e4 211 SUPERFAMILY SSF53335 7 209 9.73E-42 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS15245 bac15505f79bee19563dd39dfaa0c3e4 211 PANTHER PTHR31760 1 206 2.2E-83 T 23-04-2016 VV93_RS15245 bac15505f79bee19563dd39dfaa0c3e4 211 Pfam PF02527 rRNA small subunit methyltransferase G 24 204 3.7E-64 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VV93_RS10825 481195880be5dc5ac188c27f263ed22e 925 Gene3D G3DSA:3.30.830.10 240 471 1.3E-75 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VV93_RS10825 481195880be5dc5ac188c27f263ed22e 925 SUPERFAMILY SSF63411 4 226 1.15E-60 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV93_RS10825 481195880be5dc5ac188c27f263ed22e 925 Gene3D G3DSA:3.30.830.10 4 227 3.8E-72 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VV93_RS10825 481195880be5dc5ac188c27f263ed22e 925 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 23-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VV93_RS10825 481195880be5dc5ac188c27f263ed22e 925 SUPERFAMILY SSF63411 470 693 3.84E-59 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV93_RS10825 481195880be5dc5ac188c27f263ed22e 925 PANTHER PTHR11851:SF131 377 918 0.0 T 23-04-2016 VV93_RS10825 481195880be5dc5ac188c27f263ed22e 925 PANTHER PTHR11851:SF131 4 360 0.0 T 23-04-2016 VV93_RS10825 481195880be5dc5ac188c27f263ed22e 925 SUPERFAMILY SSF63411 233 468 4.63E-78 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV93_RS10825 481195880be5dc5ac188c27f263ed22e 925 SUPERFAMILY SSF63411 703 909 6.46E-44 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV93_RS10825 481195880be5dc5ac188c27f263ed22e 925 Gene3D G3DSA:3.30.830.10 705 918 9.1E-46 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VV93_RS10825 481195880be5dc5ac188c27f263ed22e 925 PANTHER PTHR11851 4 360 0.0 T 23-04-2016 VV93_RS10825 481195880be5dc5ac188c27f263ed22e 925 PANTHER PTHR11851 377 918 0.0 T 23-04-2016 VV93_RS10825 481195880be5dc5ac188c27f263ed22e 925 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 1.2E-36 T 23-04-2016 IPR011765 Peptidase M16, N-terminal VV93_RS10825 481195880be5dc5ac188c27f263ed22e 925 Pfam PF05193 Peptidase M16 inactive domain 648 823 1.5E-9 T 23-04-2016 IPR007863 Peptidase M16, C-terminal VV93_RS10825 481195880be5dc5ac188c27f263ed22e 925 Pfam PF05193 Peptidase M16 inactive domain 182 358 2.6E-24 T 23-04-2016 IPR007863 Peptidase M16, C-terminal VV93_RS10825 481195880be5dc5ac188c27f263ed22e 925 Pfam PF16187 Middle or third domain of peptidase_M16 366 643 6.6E-81 T 23-04-2016 IPR032632 Peptidase M16, middle/third domain VV93_RS10825 481195880be5dc5ac188c27f263ed22e 925 Gene3D G3DSA:3.30.830.10 472 704 3.3E-66 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VV93_RS13880 e4340eee6755b04170050bccc2ce3e50 203 PANTHER PTHR33169 13 200 7.7E-72 T 23-04-2016 VV93_RS13880 e4340eee6755b04170050bccc2ce3e50 203 Pfam PF10400 Virulence activator alpha C-term 116 200 1.1E-15 T 23-04-2016 IPR018309 Transcription regulator PadR, C-terminal VV93_RS13880 e4340eee6755b04170050bccc2ce3e50 203 PANTHER PTHR33169:SF4 13 200 7.7E-72 T 23-04-2016 VV93_RS13880 e4340eee6755b04170050bccc2ce3e50 203 Gene3D G3DSA:1.10.10.10 25 111 1.1E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS13880 e4340eee6755b04170050bccc2ce3e50 203 SUPERFAMILY SSF46785 27 200 5.32E-45 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS13880 e4340eee6755b04170050bccc2ce3e50 203 Pfam PF03551 Transcriptional regulator PadR-like family 31 104 1.1E-15 T 23-04-2016 IPR005149 Transcription regulator PadR, N-terminal VV93_RS14200 8df298d839681030beb360542fb55ec1 399 PANTHER PTHR10264 7 385 4.9E-200 T 23-04-2016 IPR001972 Stomatin family GO:0016020 VV93_RS14200 8df298d839681030beb360542fb55ec1 399 PANTHER PTHR10264:SF51 7 385 4.9E-200 T 23-04-2016 IPR010201 HflK GO:0016021 VV93_RS14200 8df298d839681030beb360542fb55ec1 399 SUPERFAMILY SSF117892 120 252 8.5E-23 T 23-04-2016 IPR001107 Band 7 domain VV93_RS14200 8df298d839681030beb360542fb55ec1 399 PRINTS PR00721 Stomatin signature 94 116 6.1E-7 T 23-04-2016 IPR001972 Stomatin family GO:0016020 VV93_RS14200 8df298d839681030beb360542fb55ec1 399 PRINTS PR00721 Stomatin signature 141 162 6.1E-7 T 23-04-2016 IPR001972 Stomatin family GO:0016020 VV93_RS14200 8df298d839681030beb360542fb55ec1 399 PRINTS PR00721 Stomatin signature 197 220 6.1E-7 T 23-04-2016 IPR001972 Stomatin family GO:0016020 VV93_RS14200 8df298d839681030beb360542fb55ec1 399 TIGRFAM TIGR01933 hflK: HflK protein 89 349 1.9E-124 T 23-04-2016 IPR010201 HflK GO:0016021 VV93_RS14200 8df298d839681030beb360542fb55ec1 399 Pfam PF01145 SPFH domain / Band 7 family 91 262 9.9E-33 T 23-04-2016 IPR001107 Band 7 domain VV93_RS14200 8df298d839681030beb360542fb55ec1 399 Pfam PF12221 Bacterial membrane protein N terminal 1 58 9.2E-14 T 23-04-2016 IPR020980 Menbrane protein HflK, N-terminal VV93_RS14200 8df298d839681030beb360542fb55ec1 399 SMART SM00244 87 247 1.9E-52 T 23-04-2016 IPR001107 Band 7 domain VV93_RS04660 4136679b8c81013c7f5ae13e2717679a 246 PANTHER PTHR37468 1 243 2.0E-96 T 23-04-2016 VV93_RS04660 4136679b8c81013c7f5ae13e2717679a 246 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 13 229 6.1E-42 T 23-04-2016 VV93_RS04660 4136679b8c81013c7f5ae13e2717679a 246 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 7 246 27.605 T 23-04-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 VV93_RS00475 9d2adcc16012999036b37bf85ba29f61 156 Pfam PF01878 EVE domain 2 148 7.6E-57 T 23-04-2016 IPR002740 EVE domain VV93_RS00475 9d2adcc16012999036b37bf85ba29f61 156 PANTHER PTHR14087 1 147 8.4E-77 T 23-04-2016 VV93_RS00475 9d2adcc16012999036b37bf85ba29f61 156 SUPERFAMILY SSF88697 1 148 1.56E-60 T 23-04-2016 IPR015947 PUA-like domain VV93_RS00475 9d2adcc16012999036b37bf85ba29f61 156 Gene3D G3DSA:3.10.590.10 1 148 2.4E-33 T 23-04-2016 IPR002740 EVE domain VV93_RS13815 885acbdb4538752545a3b8cc0a6a4526 170 PIRSF PIRSF016481 1 170 1.4E-47 T 23-04-2016 IPR007446 Pilus assembly protein PilP VV93_RS13815 885acbdb4538752545a3b8cc0a6a4526 170 Pfam PF04351 Pilus assembly protein, PilP 24 169 6.2E-40 T 23-04-2016 IPR007446 Pilus assembly protein PilP VV93_RS14575 3bbcd9b8fde959a49e8a33b4cf640feb 530 Gene3D G3DSA:3.40.140.20 254 373 9.9E-51 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VV93_RS14575 3bbcd9b8fde959a49e8a33b4cf640feb 530 SMART SM00851 19 132 2.5E-59 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain VV93_RS14575 3bbcd9b8fde959a49e8a33b4cf640feb 530 SMART SM00798 137 462 8.1E-218 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VV93_RS14575 3bbcd9b8fde959a49e8a33b4cf640feb 530 SUPERFAMILY SSF52335 7 197 5.76E-71 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain VV93_RS14575 3bbcd9b8fde959a49e8a33b4cf640feb 530 Gene3D G3DSA:3.40.50.1380 5 190 4.7E-86 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain VV93_RS14575 3bbcd9b8fde959a49e8a33b4cf640feb 530 Gene3D G3DSA:3.40.140.20 378 520 1.7E-60 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VV93_RS14575 3bbcd9b8fde959a49e8a33b4cf640feb 530 PANTHER PTHR11692:SF2 5 530 0.0 T 23-04-2016 VV93_RS14575 3bbcd9b8fde959a49e8a33b4cf640feb 530 PIRSF PIRSF000414 1 530 3.0E-227 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VV93_RS14575 3bbcd9b8fde959a49e8a33b4cf640feb 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 1.2E-259 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VV93_RS14575 3bbcd9b8fde959a49e8a33b4cf640feb 530 Pfam PF02142 MGS-like domain 19 132 7.9E-31 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain VV93_RS14575 3bbcd9b8fde959a49e8a33b4cf640feb 530 PANTHER PTHR11692 5 530 0.0 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VV93_RS14575 3bbcd9b8fde959a49e8a33b4cf640feb 530 SUPERFAMILY SSF53927 222 530 9.33E-131 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VV93_RS14575 3bbcd9b8fde959a49e8a33b4cf640feb 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.666 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VV93_RS14575 3bbcd9b8fde959a49e8a33b4cf640feb 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 3.2E-119 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VV93_RS14165 f984470161ad4cf163ad87f91f2bfefa 498 PANTHER PTHR11271:SF7 27 488 5.7E-148 T 23-04-2016 VV93_RS14165 f984470161ad4cf163ad87f91f2bfefa 498 SUPERFAMILY SSF51338 58 115 4.83E-34 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VV93_RS14165 f984470161ad4cf163ad87f91f2bfefa 498 SUPERFAMILY SSF51338 412 484 4.83E-34 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VV93_RS14165 f984470161ad4cf163ad87f91f2bfefa 498 Gene3D G3DSA:2.30.40.10 48 123 8.6E-18 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VV93_RS14165 f984470161ad4cf163ad87f91f2bfefa 498 PANTHER PTHR11271 27 488 5.7E-148 T 23-04-2016 VV93_RS14165 f984470161ad4cf163ad87f91f2bfefa 498 Gene3D G3DSA:2.30.40.10 395 471 8.0E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VV93_RS14165 f984470161ad4cf163ad87f91f2bfefa 498 Gene3D G3DSA:3.20.20.140 124 394 5.7E-78 T 23-04-2016 VV93_RS14165 f984470161ad4cf163ad87f91f2bfefa 498 Pfam PF01979 Amidohydrolase family 112 460 1.0E-67 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 VV93_RS14165 f984470161ad4cf163ad87f91f2bfefa 498 SUPERFAMILY SSF51556 115 413 3.2E-82 T 23-04-2016 IPR032466 Metal-dependent hydrolase VV93_RS13855 e803661cf799baff01bb7d87a2c23027 403 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 51.975 T 23-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS13855 e803661cf799baff01bb7d87a2c23027 403 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS13855 e803661cf799baff01bb7d87a2c23027 403 PANTHER PTHR11587:SF6 6 403 0.0 T 23-04-2016 VV93_RS13855 e803661cf799baff01bb7d87a2c23027 403 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS13855 e803661cf799baff01bb7d87a2c23027 403 Gene3D G3DSA:3.90.1260.10 179 402 1.1E-87 T 23-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS13855 e803661cf799baff01bb7d87a2c23027 403 Pfam PF00764 Arginosuccinate synthase 10 396 1.2E-145 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS13855 e803661cf799baff01bb7d87a2c23027 403 Gene3D G3DSA:3.40.50.620 7 175 5.7E-63 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS13855 e803661cf799baff01bb7d87a2c23027 403 SUPERFAMILY SSF69864 177 402 4.58E-87 T 23-04-2016 VV93_RS13855 e803661cf799baff01bb7d87a2c23027 403 PANTHER PTHR11587 6 403 0.0 T 23-04-2016 VV93_RS13855 e803661cf799baff01bb7d87a2c23027 403 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 1.4E-136 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS13855 e803661cf799baff01bb7d87a2c23027 403 SUPERFAMILY SSF52402 7 170 2.43E-47 T 23-04-2016 VV93_RS13775 ae5be97997a1231d6562ea70bef35c2b 100 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 97 1.4E-32 T 23-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VV93_RS13775 ae5be97997a1231d6562ea70bef35c2b 100 PIRSF PIRSF003135 1 100 1.2E-44 T 23-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VV93_RS13775 ae5be97997a1231d6562ea70bef35c2b 100 Gene3D G3DSA:2.40.50.140 1 97 8.8E-36 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS13775 ae5be97997a1231d6562ea70bef35c2b 100 Pfam PF00436 Single-strand binding protein family 3 86 1.3E-7 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 VV93_RS13775 ae5be97997a1231d6562ea70bef35c2b 100 Hamap MF_00720 Primosomal replication protein n [priB]. 1 100 27.677 T 23-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VV93_RS13775 ae5be97997a1231d6562ea70bef35c2b 100 SUPERFAMILY SSF50249 1 98 2.5E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS19005 cd4494b84e3ae60b081aaa711ad7f788 394 PIRSF PIRSF000729 26 394 2.2E-138 T 23-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VV93_RS19005 cd4494b84e3ae60b081aaa711ad7f788 394 PANTHER PTHR11063 32 394 1.1E-135 T 23-04-2016 VV93_RS19005 cd4494b84e3ae60b081aaa711ad7f788 394 PRINTS PR00474 Glutamate 5-kinase family signature 235 255 2.6E-55 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VV93_RS19005 cd4494b84e3ae60b081aaa711ad7f788 394 PRINTS PR00474 Glutamate 5-kinase family signature 174 201 2.6E-55 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VV93_RS19005 cd4494b84e3ae60b081aaa711ad7f788 394 PRINTS PR00474 Glutamate 5-kinase family signature 68 82 2.6E-55 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VV93_RS19005 cd4494b84e3ae60b081aaa711ad7f788 394 PRINTS PR00474 Glutamate 5-kinase family signature 102 130 2.6E-55 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VV93_RS19005 cd4494b84e3ae60b081aaa711ad7f788 394 PRINTS PR00474 Glutamate 5-kinase family signature 142 163 2.6E-55 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VV93_RS19005 cd4494b84e3ae60b081aaa711ad7f788 394 ProSitePatterns PS00902 Glutamate 5-kinase signature. 233 250 - T 23-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VV93_RS19005 cd4494b84e3ae60b081aaa711ad7f788 394 Pfam PF00696 Amino acid kinase family 31 260 8.2E-45 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS19005 cd4494b84e3ae60b081aaa711ad7f788 394 SUPERFAMILY SSF88697 303 393 3.59E-25 T 23-04-2016 IPR015947 PUA-like domain VV93_RS19005 cd4494b84e3ae60b081aaa711ad7f788 394 SUPERFAMILY SSF53633 31 282 5.76E-67 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS19005 cd4494b84e3ae60b081aaa711ad7f788 394 Pfam PF01472 PUA domain 303 377 3.2E-25 T 23-04-2016 IPR002478 PUA domain GO:0003723 VV93_RS19005 cd4494b84e3ae60b081aaa711ad7f788 394 SMART SM00359 303 386 1.1E-20 T 23-04-2016 IPR002478 PUA domain GO:0003723 VV93_RS19005 cd4494b84e3ae60b081aaa711ad7f788 394 Gene3D G3DSA:2.30.130.10 301 392 3.3E-26 T 23-04-2016 IPR015947 PUA-like domain VV93_RS19005 cd4494b84e3ae60b081aaa711ad7f788 394 Gene3D G3DSA:3.40.1160.10 29 286 3.2E-59 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS19005 cd4494b84e3ae60b081aaa711ad7f788 394 TIGRFAM TIGR01027 proB: glutamate 5-kinase 31 393 1.8E-148 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VV93_RS19005 cd4494b84e3ae60b081aaa711ad7f788 394 Hamap MF_00456 Glutamate 5-kinase [proB]. 31 284 36.04 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VV93_RS03870 f85b5261416901e1160363a1b9715a2b 554 Gene3D G3DSA:3.40.50.300 1 205 1.5E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03870 f85b5261416901e1160363a1b9715a2b 554 PIRSF PIRSF003128 1 554 9.5E-161 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VV93_RS03870 f85b5261416901e1160363a1b9715a2b 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 1.3E-17 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal VV93_RS03870 f85b5261416901e1160363a1b9715a2b 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 2.7E-171 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VV93_RS03870 f85b5261416901e1160363a1b9715a2b 554 Gene3D G3DSA:3.40.50.300 431 508 5.1E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03870 f85b5261416901e1160363a1b9715a2b 554 SUPERFAMILY SSF52540 1 199 9.7E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03870 f85b5261416901e1160363a1b9715a2b 554 SUPERFAMILY SSF52540 287 510 9.7E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03870 f85b5261416901e1160363a1b9715a2b 554 PANTHER PTHR11059 2 554 3.4E-178 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 SUPERFAMILY SSF52172 719 841 4.7E-41 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 SUPERFAMILY SSF47384 445 527 3.73E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 SMART SM00091 874 939 2.4E-5 T 23-04-2016 IPR000014 PAS domain VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 PANTHER PTHR24423 457 887 3.1E-134 T 23-04-2016 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 PANTHER PTHR24423 6 18 3.1E-134 T 23-04-2016 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 PANTHER PTHR24423 371 428 3.1E-134 T 23-04-2016 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 PANTHER PTHR24423 148 217 3.1E-134 T 23-04-2016 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 SMART SM00388 459 527 1.2E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 1.5E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 Pfam PF00672 HAMP domain 358 426 1.8E-15 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 SUPERFAMILY SSF158472 378 428 6.8E-11 T 23-04-2016 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 Gene3D G3DSA:3.30.450.20 218 353 3.6E-4 T 23-04-2016 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 SMART SM00448 723 836 8.6E-45 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 Gene3D G3DSA:3.30.450.20 869 927 2.1E-9 T 23-04-2016 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 Gene3D G3DSA:1.10.287.130 452 512 8.3E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 Gene3D G3DSA:3.30.565.10 513 686 4.7E-46 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 SUPERFAMILY SSF55785 861 930 8.03E-9 T 23-04-2016 IPR000014 PAS domain VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 Gene3D G3DSA:3.40.50.2300 723 846 2.5E-41 T 23-04-2016 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 SUPERFAMILY SSF55874 516 688 4.98E-46 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 4.4E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 Pfam PF00072 Response regulator receiver domain 726 837 3.7E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 3.0E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 3.0E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 3.0E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 3.0E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 PANTHER PTHR24423:SF374 457 887 3.1E-134 T 23-04-2016 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 PANTHER PTHR24423:SF374 6 18 3.1E-134 T 23-04-2016 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 PANTHER PTHR24423:SF374 371 428 3.1E-134 T 23-04-2016 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 PANTHER PTHR24423:SF374 148 217 3.1E-134 T 23-04-2016 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 Pfam PF00989 PAS fold 877 926 5.9E-6 T 23-04-2016 IPR013767 PAS fold GO:0006355 VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 SMART SM00387 573 684 1.9E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS12340 2701ecbed0487a76ea3453140f023ded 1129 SMART SM00304 377 430 2.2E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 703 54.147 T 23-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 SUPERFAMILY SSF48179 610 704 2.55E-27 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 703 0.0 T 23-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 214 2.1E-39 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 PANTHER PTHR23309:SF6 7 705 0.0 T 23-04-2016 VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 516 - T 23-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 616 690 4.9E-5 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 587 5.8E-24 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 Gene3D G3DSA:1.10.1040.10 621 703 2.1E-22 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 PANTHER PTHR23309 7 705 0.0 T 23-04-2016 VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 Gene3D G3DSA:3.40.50.720 305 495 1.6E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 Gene3D G3DSA:1.10.1040.10 496 588 2.7E-25 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 Gene3D G3DSA:3.90.226.10 2 194 4.5E-63 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 Gene3D G3DSA:3.90.226.10 232 271 4.5E-63 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 313 491 7.1E-55 T 23-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 SUPERFAMILY SSF51735 313 491 3.1E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 SUPERFAMILY SSF52096 3 302 6.9E-67 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS10830 e9c03cf4eca84765523a39f67f22c6b7 705 SUPERFAMILY SSF48179 494 593 2.64E-27 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VV93_RS05315 c5c09145ef6da5a7d87ce307c89e8bdc 564 Gene3D G3DSA:3.40.50.970 12 180 6.8E-44 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS05315 c5c09145ef6da5a7d87ce307c89e8bdc 564 PIRSF PIRSF004983 3 564 9.0E-193 T 23-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VV93_RS05315 c5c09145ef6da5a7d87ce307c89e8bdc 564 SUPERFAMILY SSF52518 381 553 5.89E-24 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS05315 c5c09145ef6da5a7d87ce307c89e8bdc 564 SUPERFAMILY SSF52467 220 347 9.45E-9 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VV93_RS05315 c5c09145ef6da5a7d87ce307c89e8bdc 564 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 436 1.9E-137 T 23-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VV93_RS05315 c5c09145ef6da5a7d87ce307c89e8bdc 564 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 142 1.4E-27 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VV93_RS05315 c5c09145ef6da5a7d87ce307c89e8bdc 564 PANTHER PTHR18968:SF114 4 556 5.5E-174 T 23-04-2016 VV93_RS05315 c5c09145ef6da5a7d87ce307c89e8bdc 564 Gene3D G3DSA:3.40.50.970 351 554 7.0E-19 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS05315 c5c09145ef6da5a7d87ce307c89e8bdc 564 Pfam PF16582 Middle domain of thiamine pyrophosphate 191 394 7.9E-44 T 23-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VV93_RS05315 c5c09145ef6da5a7d87ce307c89e8bdc 564 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 560 32.728 T 23-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VV93_RS05315 c5c09145ef6da5a7d87ce307c89e8bdc 564 SUPERFAMILY SSF52518 9 179 1.07E-30 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS05315 c5c09145ef6da5a7d87ce307c89e8bdc 564 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 418 531 2.4E-5 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VV93_RS05315 c5c09145ef6da5a7d87ce307c89e8bdc 564 PANTHER PTHR18968 4 556 5.5E-174 T 23-04-2016 VV93_RS01240 dc8befa1841c7201ef19b6826ed95411 289 PANTHER PTHR24220:SF535 8 273 2.1E-131 T 23-04-2016 VV93_RS01240 dc8befa1841c7201ef19b6826ed95411 289 Pfam PF00005 ABC transporter 26 186 1.9E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS01240 dc8befa1841c7201ef19b6826ed95411 289 SUPERFAMILY SSF52540 6 257 2.77E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01240 dc8befa1841c7201ef19b6826ed95411 289 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS01240 dc8befa1841c7201ef19b6826ed95411 289 Gene3D G3DSA:3.40.50.300 5 259 4.1E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01240 dc8befa1841c7201ef19b6826ed95411 289 SMART SM00382 35 244 2.0E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS01240 dc8befa1841c7201ef19b6826ed95411 289 PANTHER PTHR24220 8 273 2.1E-131 T 23-04-2016 VV93_RS06520 0f608f74a9cf6ce76d3fa32746821938 404 Gene3D G3DSA:3.20.20.450 80 181 9.7E-14 T 23-04-2016 IPR001633 EAL domain VV93_RS06520 0f608f74a9cf6ce76d3fa32746821938 404 Pfam PF00563 EAL domain 75 190 7.4E-17 T 23-04-2016 IPR001633 EAL domain VV93_RS06520 0f608f74a9cf6ce76d3fa32746821938 404 SMART SM00052 2 195 1.1E-4 T 23-04-2016 IPR001633 EAL domain VV93_RS06520 0f608f74a9cf6ce76d3fa32746821938 404 Pfam PF08668 HDOD domain 205 319 2.8E-12 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD VV93_RS06520 0f608f74a9cf6ce76d3fa32746821938 404 PANTHER PTHR33525:SF4 3 368 1.2E-125 T 23-04-2016 VV93_RS06520 0f608f74a9cf6ce76d3fa32746821938 404 PIRSF PIRSF003180 1 403 7.1E-171 T 23-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VV93_RS06520 0f608f74a9cf6ce76d3fa32746821938 404 SUPERFAMILY SSF109604 181 400 2.29E-43 T 23-04-2016 VV93_RS06520 0f608f74a9cf6ce76d3fa32746821938 404 PANTHER PTHR33525 3 368 1.2E-125 T 23-04-2016 VV93_RS06520 0f608f74a9cf6ce76d3fa32746821938 404 SUPERFAMILY SSF141868 5 193 3.79E-30 T 23-04-2016 IPR001633 EAL domain VV93_RS06520 0f608f74a9cf6ce76d3fa32746821938 404 Gene3D G3DSA:1.10.3150.10 182 399 5.5E-34 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD VV93_RS06815 a473d27929276a4db2ae8e6328d6f475 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 6.0E-48 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VV93_RS06815 a473d27929276a4db2ae8e6328d6f475 92 PANTHER PTHR33284 1 92 1.6E-35 T 23-04-2016 VV93_RS06815 a473d27929276a4db2ae8e6328d6f475 92 Gene3D G3DSA:2.40.240.10 1 92 9.3E-31 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 VV93_RS06815 a473d27929276a4db2ae8e6328d6f475 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.282 T 23-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 VV93_RS06815 a473d27929276a4db2ae8e6328d6f475 92 Pfam PF01386 Ribosomal L25p family 4 89 1.8E-22 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VV93_RS06815 a473d27929276a4db2ae8e6328d6f475 92 SUPERFAMILY SSF50715 1 92 6.1E-28 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 VV93_RS07700 4e2bbf8c90d28d9c27b79e9545192651 280 Pfam PF00691 OmpA family 164 258 7.8E-22 T 23-04-2016 IPR006665 OmpA-like domain VV93_RS07700 4e2bbf8c90d28d9c27b79e9545192651 280 PRINTS PR01021 OMPA domain signature 209 225 3.0E-9 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV93_RS07700 4e2bbf8c90d28d9c27b79e9545192651 280 PRINTS PR01021 OMPA domain signature 194 209 3.0E-9 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV93_RS07700 4e2bbf8c90d28d9c27b79e9545192651 280 PRINTS PR01021 OMPA domain signature 164 186 3.0E-9 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV93_RS07700 4e2bbf8c90d28d9c27b79e9545192651 280 Gene3D G3DSA:3.30.1330.60 158 264 5.6E-27 T 23-04-2016 IPR006665 OmpA-like domain VV93_RS07700 4e2bbf8c90d28d9c27b79e9545192651 280 PANTHER PTHR30128 149 264 4.5E-25 T 23-04-2016 VV93_RS07700 4e2bbf8c90d28d9c27b79e9545192651 280 SUPERFAMILY SSF103088 153 264 7.06E-30 T 23-04-2016 IPR006665 OmpA-like domain VV93_RS00250 a447d7b08d4c7e2b94478dcb07226fe6 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 309 3.9E-30 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS00250 a447d7b08d4c7e2b94478dcb07226fe6 312 PANTHER PTHR30465 7 311 1.2E-209 T 23-04-2016 VV93_RS00250 a447d7b08d4c7e2b94478dcb07226fe6 312 PANTHER PTHR30465:SF67 7 311 1.2E-209 T 23-04-2016 VV93_RS00250 a447d7b08d4c7e2b94478dcb07226fe6 312 SUPERFAMILY SSF161098 93 294 2.62E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS00250 a447d7b08d4c7e2b94478dcb07226fe6 312 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 69 2.1E-9 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VV93_RS00250 a447d7b08d4c7e2b94478dcb07226fe6 312 Gene3D G3DSA:1.10.3720.10 91 307 6.5E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS11145 6b334b15f9c35a604d585e8633b659f8 292 PANTHER PTHR12128 1 292 4.2E-143 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VV93_RS11145 6b334b15f9c35a604d585e8633b659f8 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 287 2.7E-118 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS11145 6b334b15f9c35a604d585e8633b659f8 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.786 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS11145 6b334b15f9c35a604d585e8633b659f8 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 6.4E-34 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VV93_RS11145 6b334b15f9c35a604d585e8633b659f8 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 6.4E-34 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VV93_RS11145 6b334b15f9c35a604d585e8633b659f8 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 6.4E-34 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VV93_RS11145 6b334b15f9c35a604d585e8633b659f8 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 6.4E-34 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VV93_RS11145 6b334b15f9c35a604d585e8633b659f8 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 23-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS11145 6b334b15f9c35a604d585e8633b659f8 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 23-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS11145 6b334b15f9c35a604d585e8633b659f8 292 SMART SM01130 1 290 3.6E-142 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VV93_RS11145 6b334b15f9c35a604d585e8633b659f8 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 286 4.9E-109 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VV93_RS11145 6b334b15f9c35a604d585e8633b659f8 292 Gene3D G3DSA:3.20.20.70 1 291 1.1E-115 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS11145 6b334b15f9c35a604d585e8633b659f8 292 SUPERFAMILY SSF51569 2 290 5.65E-101 T 23-04-2016 VV93_RS11145 6b334b15f9c35a604d585e8633b659f8 292 PIRSF PIRSF001365 1 291 3.5E-94 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VV93_RS11145 6b334b15f9c35a604d585e8633b659f8 292 PANTHER PTHR12128:SF34 1 292 4.2E-143 T 23-04-2016 VV93_RS01045 654adec41240ab0bc6e479261b5684f0 128 PIRSF PIRSF016821 5 128 1.2E-43 T 23-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 VV93_RS01045 654adec41240ab0bc6e479261b5684f0 128 SMART SM00363 8 71 1.4E-12 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS01045 654adec41240ab0bc6e479261b5684f0 128 SUPERFAMILY SSF55174 8 105 2.22E-32 T 23-04-2016 VV93_RS01045 654adec41240ab0bc6e479261b5684f0 128 Pfam PF01479 S4 domain 8 53 1.7E-14 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS01045 654adec41240ab0bc6e479261b5684f0 128 PANTHER PTHR11079:SF70 1 62 1.7E-31 T 23-04-2016 VV93_RS01045 654adec41240ab0bc6e479261b5684f0 128 PANTHER PTHR11079 1 62 1.7E-31 T 23-04-2016 VV93_RS01045 654adec41240ab0bc6e479261b5684f0 128 Gene3D G3DSA:3.10.290.10 7 102 7.6E-39 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS12710 984597e5e15a9a19dbde2d45e7c34b49 63 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-20 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VV93_RS12710 984597e5e15a9a19dbde2d45e7c34b49 63 Pfam PF02599 Global regulator protein family 1 52 1.4E-26 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VV93_RS12710 984597e5e15a9a19dbde2d45e7c34b49 63 SUPERFAMILY SSF117130 1 54 4.32E-21 T 23-04-2016 VV93_RS12710 984597e5e15a9a19dbde2d45e7c34b49 63 PANTHER PTHR34984 1 62 1.4E-32 T 23-04-2016 VV93_RS12710 984597e5e15a9a19dbde2d45e7c34b49 63 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 56 1.8E-29 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VV93_RS12710 984597e5e15a9a19dbde2d45e7c34b49 63 Hamap MF_00167 Carbon storage regulator [csrA]. 1 62 20.442 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VV93_RS12710 984597e5e15a9a19dbde2d45e7c34b49 63 PANTHER PTHR34984:SF1 1 62 1.4E-32 T 23-04-2016 VV93_RS13400 659c7efbf835a8f09bf9b30d2fb99fcc 258 SUPERFAMILY SSF49785 2 156 2.72E-18 T 23-04-2016 IPR008979 Galactose-binding domain-like VV93_RS13400 659c7efbf835a8f09bf9b30d2fb99fcc 258 Gene3D G3DSA:2.60.120.260 53 154 4.1E-6 T 23-04-2016 IPR008979 Galactose-binding domain-like VV93_RS09300 83f786b32a4ec2a81202433198133ae1 571 Gene3D G3DSA:3.30.450.20 20 144 8.8E-18 T 23-04-2016 VV93_RS09300 83f786b32a4ec2a81202433198133ae1 571 SUPERFAMILY SSF55073 152 304 1.18E-14 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS09300 83f786b32a4ec2a81202433198133ae1 571 SUPERFAMILY SSF141868 318 564 2.22E-72 T 23-04-2016 IPR001633 EAL domain VV93_RS09300 83f786b32a4ec2a81202433198133ae1 571 SMART SM00052 313 559 2.2E-66 T 23-04-2016 IPR001633 EAL domain VV93_RS09300 83f786b32a4ec2a81202433198133ae1 571 SMART SM00086 94 134 1.0E-5 T 23-04-2016 IPR001610 PAC motif VV93_RS09300 83f786b32a4ec2a81202433198133ae1 571 Gene3D G3DSA:3.20.20.450 317 563 1.3E-74 T 23-04-2016 IPR001633 EAL domain VV93_RS09300 83f786b32a4ec2a81202433198133ae1 571 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 138 2.0E-12 T 23-04-2016 IPR000014 PAS domain VV93_RS09300 83f786b32a4ec2a81202433198133ae1 571 Pfam PF00563 EAL domain 320 554 2.0E-62 T 23-04-2016 IPR001633 EAL domain VV93_RS09300 83f786b32a4ec2a81202433198133ae1 571 PANTHER PTHR33121 303 563 3.8E-60 T 23-04-2016 VV93_RS09300 83f786b32a4ec2a81202433198133ae1 571 SUPERFAMILY SSF55785 26 136 1.5E-16 T 23-04-2016 IPR000014 PAS domain VV93_RS09300 83f786b32a4ec2a81202433198133ae1 571 Gene3D G3DSA:3.30.70.270 146 309 1.0E-16 T 23-04-2016 VV93_RS09300 83f786b32a4ec2a81202433198133ae1 571 Pfam PF00990 Diguanylate cyclase, GGDEF domain 145 296 4.0E-12 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09300 83f786b32a4ec2a81202433198133ae1 571 SMART SM00267 134 303 1.2E-7 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09300 83f786b32a4ec2a81202433198133ae1 571 PANTHER PTHR33121:SF13 303 563 3.8E-60 T 23-04-2016 VV93_RS09300 83f786b32a4ec2a81202433198133ae1 571 Pfam PF08447 PAS fold 45 121 4.8E-11 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 VV93_RS08790 865e9819fcc2a4d125661095828c5df7 95 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.6E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS08790 865e9819fcc2a4d125661095828c5df7 95 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.6E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS08790 865e9819fcc2a4d125661095828c5df7 95 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.6E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS08790 865e9819fcc2a4d125661095828c5df7 95 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VV93_RS08790 865e9819fcc2a4d125661095828c5df7 95 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 93 1.1E-50 T 23-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 VV93_RS08790 865e9819fcc2a4d125661095828c5df7 95 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 95 29.664 T 23-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 VV93_RS08790 865e9819fcc2a4d125661095828c5df7 95 PANTHER PTHR33175:SF2 2 93 7.4E-54 T 23-04-2016 VV93_RS08790 865e9819fcc2a4d125661095828c5df7 95 SMART SM00411 3 92 2.7E-40 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS08790 865e9819fcc2a4d125661095828c5df7 95 Pfam PF00216 Bacterial DNA-binding protein 3 91 8.8E-32 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS08790 865e9819fcc2a4d125661095828c5df7 95 PANTHER PTHR33175 2 93 7.4E-54 T 23-04-2016 VV93_RS08790 865e9819fcc2a4d125661095828c5df7 95 SUPERFAMILY SSF47729 3 93 3.53E-32 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VV93_RS08790 865e9819fcc2a4d125661095828c5df7 95 Gene3D G3DSA:4.10.520.10 2 93 9.0E-37 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.2E-43 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.1E-6 T 23-04-2016 VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 2.1E-6 T 23-04-2016 VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.1E-6 T 23-04-2016 VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 SUPERFAMILY SSF54810 397 517 4.71E-51 T 23-04-2016 VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 Gene3D G3DSA:3.30.300.10 393 517 3.6E-53 T 23-04-2016 VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.0E-6 T 23-04-2016 VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.0E-6 T 23-04-2016 VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.0E-6 T 23-04-2016 VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 6.8E-85 T 23-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 SUPERFAMILY SSF52317 8 229 3.97E-58 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 Pfam PF02540 NAD synthase 212 285 1.1E-7 T 23-04-2016 IPR022310 NAD/GMP synthase VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 Gene3D G3DSA:3.40.50.620 215 391 5.0E-57 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.4E-7 T 23-04-2016 VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.4E-7 T 23-04-2016 VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.4E-7 T 23-04-2016 VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.658 T 23-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 SUPERFAMILY SSF52402 189 412 3.75E-58 T 23-04-2016 VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 2.4E-156 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 1.3E-42 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VV93_RS03660 7a23e14b40a9a5368f6f6717d9f9c74d 517 Gene3D G3DSA:3.40.50.880 4 214 2.7E-64 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS08805 f0792b6a047f8e5c4ad616bfa6362f3e 437 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 411 1.5E-156 T 23-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 VV93_RS08805 f0792b6a047f8e5c4ad616bfa6362f3e 437 SUPERFAMILY SSF51690 129 410 4.12E-86 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 VV93_RS08805 f0792b6a047f8e5c4ad616bfa6362f3e 437 PANTHER PTHR11098:SF16 5 414 5.7E-162 T 23-04-2016 VV93_RS08805 f0792b6a047f8e5c4ad616bfa6362f3e 437 PIRSF PIRSF000484 1 400 1.9E-72 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 VV93_RS08805 f0792b6a047f8e5c4ad616bfa6362f3e 437 SUPERFAMILY SSF54675 8 146 2.71E-34 T 23-04-2016 VV93_RS08805 f0792b6a047f8e5c4ad616bfa6362f3e 437 Gene3D G3DSA:3.20.140.10 6 395 5.2E-135 T 23-04-2016 VV93_RS08805 f0792b6a047f8e5c4ad616bfa6362f3e 437 PANTHER PTHR11098 5 414 5.7E-162 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 VV93_RS08805 f0792b6a047f8e5c4ad616bfa6362f3e 437 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 178 411 1.5E-77 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 VV93_RS08805 f0792b6a047f8e5c4ad616bfa6362f3e 437 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 413 43.677 T 23-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 VV93_RS11830 d68fe564d3fe72afa6fbc4d4f1c750fd 394 Pfam PF05940 NnrS protein 16 388 2.5E-106 T 23-04-2016 IPR010266 NnrS VV93_RS05355 ce75288484d3bc69757f6d515bc785e8 196 SUPERFAMILY SSF46689 2 77 1.75E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS05355 ce75288484d3bc69757f6d515bc785e8 196 Gene3D G3DSA:1.10.357.10 2 195 4.7E-32 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VV93_RS05355 ce75288484d3bc69757f6d515bc785e8 196 SUPERFAMILY SSF48498 87 193 1.78E-20 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VV93_RS05355 ce75288484d3bc69757f6d515bc785e8 196 PANTHER PTHR30055 1 196 1.6E-85 T 23-04-2016 VV93_RS05355 ce75288484d3bc69757f6d515bc785e8 196 PANTHER PTHR30055:SF85 1 196 1.6E-85 T 23-04-2016 VV93_RS05355 ce75288484d3bc69757f6d515bc785e8 196 Pfam PF13305 WHG domain 92 172 1.2E-12 T 23-04-2016 IPR025996 WHG domain VV93_RS13395 1c966a9c7e003064dcec79c2f1276f36 164 Gene3D G3DSA:3.40.630.30 4 164 9.4E-33 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS13395 1c966a9c7e003064dcec79c2f1276f36 164 SUPERFAMILY SSF55729 5 162 5.32E-29 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS13395 1c966a9c7e003064dcec79c2f1276f36 164 PANTHER PTHR13947:SF7 5 160 3.2E-56 T 23-04-2016 VV93_RS13395 1c966a9c7e003064dcec79c2f1276f36 164 PANTHER PTHR13947 5 160 3.2E-56 T 23-04-2016 VV93_RS13395 1c966a9c7e003064dcec79c2f1276f36 164 Pfam PF13508 Acetyltransferase (GNAT) domain 57 142 3.5E-12 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS14855 45676b3ebb959eb82e84f4049e047f07 304 SUPERFAMILY SSF103481 50 146 4.84E-13 T 23-04-2016 VV93_RS14855 45676b3ebb959eb82e84f4049e047f07 304 TIGRFAM TIGR00688 rarD: protein RarD 11 264 2.4E-87 T 23-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 VV93_RS14855 45676b3ebb959eb82e84f4049e047f07 304 SUPERFAMILY SSF103481 192 291 3.4E-8 T 23-04-2016 VV93_RS14855 45676b3ebb959eb82e84f4049e047f07 304 Pfam PF00892 EamA-like transporter family 155 287 1.6E-6 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VV93_RS14855 45676b3ebb959eb82e84f4049e047f07 304 Pfam PF00892 EamA-like transporter family 12 145 9.5E-16 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VV93_RS14855 45676b3ebb959eb82e84f4049e047f07 304 PANTHER PTHR22911 2 299 1.2E-149 T 23-04-2016 VV93_RS14855 45676b3ebb959eb82e84f4049e047f07 304 PANTHER PTHR22911:SF41 2 299 1.2E-149 T 23-04-2016 VV93_RS09320 fdd4547dd952506aa76f98205f2a20a6 472 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 462 1.9E-77 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VV93_RS09320 fdd4547dd952506aa76f98205f2a20a6 472 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 462 1.9E-49 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VV93_RS09320 fdd4547dd952506aa76f98205f2a20a6 472 PANTHER PTHR10283 1 6 2.6E-136 T 23-04-2016 VV93_RS09320 fdd4547dd952506aa76f98205f2a20a6 472 PANTHER PTHR10283 31 69 2.6E-136 T 23-04-2016 VV93_RS09320 fdd4547dd952506aa76f98205f2a20a6 472 PANTHER PTHR10283 89 468 2.6E-136 T 23-04-2016 VV93_RS09320 fdd4547dd952506aa76f98205f2a20a6 472 PANTHER PTHR10283:SF92 1 6 2.6E-136 T 23-04-2016 VV93_RS09320 fdd4547dd952506aa76f98205f2a20a6 472 PANTHER PTHR10283:SF92 31 69 2.6E-136 T 23-04-2016 VV93_RS09320 fdd4547dd952506aa76f98205f2a20a6 472 PANTHER PTHR10283:SF92 89 468 2.6E-136 T 23-04-2016 VV93_RS09320 fdd4547dd952506aa76f98205f2a20a6 472 PIRSF PIRSF002457 1 472 3.4E-116 T 23-04-2016 IPR030676 Citrate carrier CitT-related VV93_RS10380 7a25c8ad2a13e1e256b7aaf7b6f8d784 758 Pfam PF01228 Glycine radical 628 739 2.0E-43 T 23-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 VV93_RS10380 7a25c8ad2a13e1e256b7aaf7b6f8d784 758 Gene3D G3DSA:3.20.70.20 3 757 0.0 T 23-04-2016 VV93_RS10380 7a25c8ad2a13e1e256b7aaf7b6f8d784 758 PANTHER PTHR30191 1 758 0.0 T 23-04-2016 VV93_RS10380 7a25c8ad2a13e1e256b7aaf7b6f8d784 758 SUPERFAMILY SSF51998 4 757 8.01E-287 T 23-04-2016 VV93_RS10380 7a25c8ad2a13e1e256b7aaf7b6f8d784 758 PIRSF PIRSF000379 5 758 0.0 T 23-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 VV93_RS10380 7a25c8ad2a13e1e256b7aaf7b6f8d784 758 PANTHER PTHR30191:SF0 1 758 0.0 T 23-04-2016 VV93_RS10380 7a25c8ad2a13e1e256b7aaf7b6f8d784 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 8.2E-204 T 23-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 VV93_RS10380 7a25c8ad2a13e1e256b7aaf7b6f8d784 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 23-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 VV93_RS10380 7a25c8ad2a13e1e256b7aaf7b6f8d784 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 23-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VV93_RS12270 5418892a26625bab18b36374e780d90c 98 PANTHER PTHR31846 1 98 3.3E-39 T 23-04-2016 VV93_RS12270 5418892a26625bab18b36374e780d90c 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.7E-19 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VV93_RS12270 5418892a26625bab18b36374e780d90c 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 7.9E-37 T 23-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 VV93_RS12270 5418892a26625bab18b36374e780d90c 98 Gene3D G3DSA:3.30.110.60 1 96 4.4E-31 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VV93_RS12270 5418892a26625bab18b36374e780d90c 98 SUPERFAMILY SSF75471 1 94 1.19E-28 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VV93_RS12270 5418892a26625bab18b36374e780d90c 98 SMART SM01103 3 86 4.9E-39 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VV93_RS12270 5418892a26625bab18b36374e780d90c 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 3.0E-44 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VV93_RS02650 f3b07f879f0d9f52c02791c34f0dd174 250 PANTHER PTHR11537:SF14 13 200 2.9E-21 T 23-04-2016 VV93_RS02650 f3b07f879f0d9f52c02791c34f0dd174 250 PANTHER PTHR11537 13 200 2.9E-21 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VV93_RS02650 f3b07f879f0d9f52c02791c34f0dd174 250 Pfam PF00520 Ion transport protein 21 209 7.6E-18 T 23-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VV93_RS02650 f3b07f879f0d9f52c02791c34f0dd174 250 Gene3D G3DSA:1.20.120.350 11 127 4.1E-16 T 23-04-2016 IPR027359 Voltage-dependent channel, four helix bundle domain VV93_RS02650 f3b07f879f0d9f52c02791c34f0dd174 250 PRINTS PR00169 Potassium channel signature 183 209 1.3E-7 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VV93_RS02650 f3b07f879f0d9f52c02791c34f0dd174 250 PRINTS PR00169 Potassium channel signature 154 176 1.3E-7 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VV93_RS02650 f3b07f879f0d9f52c02791c34f0dd174 250 PRINTS PR00169 Potassium channel signature 123 146 1.3E-7 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VV93_RS02650 f3b07f879f0d9f52c02791c34f0dd174 250 SUPERFAMILY SSF81324 13 210 9.68E-48 T 23-04-2016 VV93_RS02650 f3b07f879f0d9f52c02791c34f0dd174 250 Gene3D G3DSA:1.10.287.70 128 173 1.0E-15 T 23-04-2016 VV93_RS02650 f3b07f879f0d9f52c02791c34f0dd174 250 Gene3D G3DSA:1.20.5.110 175 216 4.6E-15 T 23-04-2016 VV93_RS12405 2e9362a2dac63f1dd47c41a6746e9ab3 337 Gene3D G3DSA:3.40.190.10 22 114 4.6E-20 T 23-04-2016 VV93_RS12405 2e9362a2dac63f1dd47c41a6746e9ab3 337 SUPERFAMILY SSF53850 24 332 9.51E-78 T 23-04-2016 VV93_RS12405 2e9362a2dac63f1dd47c41a6746e9ab3 337 Pfam PF13343 Bacterial extracellular solute-binding protein 72 297 1.6E-21 T 23-04-2016 VV93_RS12405 2e9362a2dac63f1dd47c41a6746e9ab3 337 PANTHER PTHR30006:SF4 1 337 6.4E-186 T 23-04-2016 VV93_RS12405 2e9362a2dac63f1dd47c41a6746e9ab3 337 PANTHER PTHR30006 1 337 6.4E-186 T 23-04-2016 VV93_RS12405 2e9362a2dac63f1dd47c41a6746e9ab3 337 PIRSF PIRSF002825 1 337 1.0E-108 T 23-04-2016 IPR026045 Ferric binding protein VV93_RS12405 2e9362a2dac63f1dd47c41a6746e9ab3 337 Gene3D G3DSA:3.40.190.10 120 284 7.0E-62 T 23-04-2016 VV93_RS00310 ed8e0e40a400f9cd2b7ff0aad1be3dac 173 PANTHER PTHR11603 6 165 1.0E-83 T 23-04-2016 VV93_RS00310 ed8e0e40a400f9cd2b7ff0aad1be3dac 173 Pfam PF01202 Shikimate kinase 13 129 9.5E-13 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS00310 ed8e0e40a400f9cd2b7ff0aad1be3dac 173 SUPERFAMILY SSF52540 4 166 2.84E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00310 ed8e0e40a400f9cd2b7ff0aad1be3dac 173 Gene3D G3DSA:3.40.50.300 3 164 3.8E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00310 ed8e0e40a400f9cd2b7ff0aad1be3dac 173 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 7 165 7.1E-64 T 23-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 VV93_RS11870 5825331a992114a4c07fc4cce87d3f59 354 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 178 187 - T 23-04-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 VV93_RS11870 5825331a992114a4c07fc4cce87d3f59 354 SUPERFAMILY SSF74650 14 352 2.01E-110 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VV93_RS11870 5825331a992114a4c07fc4cce87d3f59 354 PANTHER PTHR10091:SF0 1 354 8.1E-138 T 23-04-2016 VV93_RS11870 5825331a992114a4c07fc4cce87d3f59 354 Gene3D G3DSA:2.70.98.10 19 353 1.2E-123 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 VV93_RS11870 5825331a992114a4c07fc4cce87d3f59 354 Pfam PF01263 Aldose 1-epimerase 25 351 3.7E-94 T 23-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VV93_RS11870 5825331a992114a4c07fc4cce87d3f59 354 PIRSF PIRSF005096 7 354 2.2E-116 T 23-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 VV93_RS11870 5825331a992114a4c07fc4cce87d3f59 354 PANTHER PTHR10091 1 354 8.1E-138 T 23-04-2016 VV93_RS11870 5825331a992114a4c07fc4cce87d3f59 354 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 20 353 3.1E-146 T 23-04-2016 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 VV93_RS01020 be91ba8aac43e9faada8a64227f15130 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 1.6E-49 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VV93_RS01020 be91ba8aac43e9faada8a64227f15130 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 1.8E-63 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VV93_RS01020 be91ba8aac43e9faada8a64227f15130 144 SUPERFAMILY SSF69500 2 143 6.67E-53 T 23-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain VV93_RS01020 be91ba8aac43e9faada8a64227f15130 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.506 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VV93_RS01020 be91ba8aac43e9faada8a64227f15130 144 Gene3D G3DSA:3.50.80.10 3 143 5.3E-52 T 23-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain VV93_RS01020 be91ba8aac43e9faada8a64227f15130 144 PANTHER PTHR10472 2 143 4.3E-64 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VV93_RS04615 195b1f2b1aba9c39fd7c76d41bd84627 397 SUPERFAMILY SSF64518 1 397 2.62E-63 T 23-04-2016 VV93_RS04615 195b1f2b1aba9c39fd7c76d41bd84627 397 PANTHER PTHR30244:SF5 1 187 6.1E-91 T 23-04-2016 VV93_RS04615 195b1f2b1aba9c39fd7c76d41bd84627 397 PANTHER PTHR30244:SF5 225 397 6.1E-91 T 23-04-2016 VV93_RS04615 195b1f2b1aba9c39fd7c76d41bd84627 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 11 142 1.8E-11 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS04615 195b1f2b1aba9c39fd7c76d41bd84627 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 5.3E-92 T 23-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 VV93_RS04615 195b1f2b1aba9c39fd7c76d41bd84627 397 Gene3D G3DSA:1.20.1330.10 57 170 2.2E-11 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS04615 195b1f2b1aba9c39fd7c76d41bd84627 397 Gene3D G3DSA:1.20.1330.10 302 355 2.2E-11 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS04615 195b1f2b1aba9c39fd7c76d41bd84627 397 PANTHER PTHR30244 1 187 6.1E-91 T 23-04-2016 VV93_RS04615 195b1f2b1aba9c39fd7c76d41bd84627 397 PANTHER PTHR30244 225 397 6.1E-91 T 23-04-2016 VV93_RS03125 8abd770796337a055dd2ce38c16f53e0 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 33.208 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VV93_RS03125 8abd770796337a055dd2ce38c16f53e0 283 SUPERFAMILY SSF55831 2 283 2.88E-91 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VV93_RS03125 8abd770796337a055dd2ce38c16f53e0 283 Pfam PF00303 Thymidylate synthase 2 283 1.7E-75 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VV93_RS03125 8abd770796337a055dd2ce38c16f53e0 283 Gene3D G3DSA:3.30.572.10 2 283 5.5E-79 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VV93_RS03125 8abd770796337a055dd2ce38c16f53e0 283 PANTHER PTHR11548 2 283 1.4E-106 T 23-04-2016 VV93_RS03125 8abd770796337a055dd2ce38c16f53e0 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 1.6E-42 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VV93_RS03125 8abd770796337a055dd2ce38c16f53e0 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 23-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VV93_RS03125 8abd770796337a055dd2ce38c16f53e0 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 7.7E-14 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VV93_RS03125 8abd770796337a055dd2ce38c16f53e0 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 7.7E-14 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VV93_RS03125 8abd770796337a055dd2ce38c16f53e0 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 7.7E-14 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VV93_RS03125 8abd770796337a055dd2ce38c16f53e0 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 7.7E-14 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VV93_RS05950 f6c030b04d782d07899e53fbd83f1c0b 959 Gene3D G3DSA:3.40.640.10 89 339 3.5E-65 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS05950 f6c030b04d782d07899e53fbd83f1c0b 959 PANTHER PTHR11999:SF106 464 957 6.7E-173 T 23-04-2016 VV93_RS05950 f6c030b04d782d07899e53fbd83f1c0b 959 Gene3D G3DSA:1.20.1650.10 465 561 4.3E-37 T 23-04-2016 VV93_RS05950 f6c030b04d782d07899e53fbd83f1c0b 959 PANTHER PTHR11999 464 957 6.7E-173 T 23-04-2016 VV93_RS05950 f6c030b04d782d07899e53fbd83f1c0b 959 SUPERFAMILY SSF53383 507 957 3.94E-115 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS05950 f6c030b04d782d07899e53fbd83f1c0b 959 Gene3D G3DSA:3.40.640.10 572 845 3.2E-91 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS05950 f6c030b04d782d07899e53fbd83f1c0b 959 SUPERFAMILY SSF53383 43 465 2.04E-113 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS05950 f6c030b04d782d07899e53fbd83f1c0b 959 Gene3D G3DSA:3.90.1150.10 846 957 4.9E-38 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS05950 f6c030b04d782d07899e53fbd83f1c0b 959 Pfam PF00202 Aminotransferase class-III 52 465 4.3E-94 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV93_RS05950 f6c030b04d782d07899e53fbd83f1c0b 959 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 35 467 3.8E-158 T 23-04-2016 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 VV93_RS05950 f6c030b04d782d07899e53fbd83f1c0b 959 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 533 892 2.7E-63 T 23-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VV93_RS05950 f6c030b04d782d07899e53fbd83f1c0b 959 Gene3D G3DSA:3.90.1150.10 340 464 4.1E-43 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS04850 9cc0f5c2558678341f6043418ecd121a 222 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 13 135 1.0E-69 T 23-04-2016 IPR013559 YheO-like VV93_RS04850 9cc0f5c2558678341f6043418ecd121a 222 PANTHER PTHR35568 1 222 1.4E-66 T 23-04-2016 VV93_RS04850 9cc0f5c2558678341f6043418ecd121a 222 Pfam PF08348 YheO-like PAS domain 17 123 8.5E-36 T 23-04-2016 IPR013559 YheO-like VV93_RS04850 9cc0f5c2558678341f6043418ecd121a 222 PANTHER PTHR35568:SF3 1 222 1.4E-66 T 23-04-2016 VV93_RS04850 9cc0f5c2558678341f6043418ecd121a 222 Pfam PF13309 HTH domain 160 217 5.1E-13 T 23-04-2016 VV93_RS04850 9cc0f5c2558678341f6043418ecd121a 222 Gene3D G3DSA:1.10.10.10 168 218 3.1E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS06575 c36a40a7b9a665b33efd11ab5c307720 280 PANTHER PTHR30520:SF4 1 227 3.5E-100 T 23-04-2016 VV93_RS06575 c36a40a7b9a665b33efd11ab5c307720 280 PANTHER PTHR30520:SF4 244 279 3.5E-100 T 23-04-2016 VV93_RS06575 c36a40a7b9a665b33efd11ab5c307720 280 Gene3D G3DSA:1.20.1080.10 29 279 2.1E-87 T 23-04-2016 IPR023271 Aquaporin-like VV93_RS06575 c36a40a7b9a665b33efd11ab5c307720 280 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 1.4E-79 T 23-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 VV93_RS06575 c36a40a7b9a665b33efd11ab5c307720 280 PANTHER PTHR30520 1 227 3.5E-100 T 23-04-2016 VV93_RS06575 c36a40a7b9a665b33efd11ab5c307720 280 PANTHER PTHR30520 244 279 3.5E-100 T 23-04-2016 VV93_RS06575 c36a40a7b9a665b33efd11ab5c307720 280 Pfam PF01226 Formate/nitrite transporter 14 275 2.9E-75 T 23-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 VV93_RS06575 c36a40a7b9a665b33efd11ab5c307720 280 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 23-04-2016 IPR024002 Formate/nitrite transporter, conserved site VV93_RS06575 c36a40a7b9a665b33efd11ab5c307720 280 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 278 8.7E-115 T 23-04-2016 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VV93_RS01500 73a66564bf1e908de5829db1fb37483f 353 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 74 303 1.0E-60 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 VV93_RS01500 73a66564bf1e908de5829db1fb37483f 353 PANTHER PTHR30160 1 353 1.1E-141 T 23-04-2016 VV93_RS01500 73a66564bf1e908de5829db1fb37483f 353 Gene3D G3DSA:3.40.50.2000 13 155 2.3E-24 T 23-04-2016 VV93_RS01500 73a66564bf1e908de5829db1fb37483f 353 PANTHER PTHR30160:SF12 1 353 1.1E-141 T 23-04-2016 VV93_RS01500 73a66564bf1e908de5829db1fb37483f 353 Gene3D G3DSA:3.40.50.2000 169 346 3.0E-45 T 23-04-2016 VV93_RS01500 73a66564bf1e908de5829db1fb37483f 353 SUPERFAMILY SSF53756 10 342 4.87E-85 T 23-04-2016 VV93_RS01075 c7fa92c0dbdba2cbc20908816c21d228 200 Pfam PF12019 Type II transport protein GspH 47 185 5.2E-12 T 23-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VV93_RS01075 c7fa92c0dbdba2cbc20908816c21d228 200 Gene3D G3DSA:3.55.40.10 44 196 2.1E-53 T 23-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VV93_RS01075 c7fa92c0dbdba2cbc20908816c21d228 200 PRINTS PR00885 Bacterial general secretion pathway protein H signature 7 21 7.6E-21 T 23-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VV93_RS01075 c7fa92c0dbdba2cbc20908816c21d228 200 PRINTS PR00885 Bacterial general secretion pathway protein H signature 22 36 7.6E-21 T 23-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VV93_RS01075 c7fa92c0dbdba2cbc20908816c21d228 200 PRINTS PR00885 Bacterial general secretion pathway protein H signature 148 163 7.6E-21 T 23-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VV93_RS01075 c7fa92c0dbdba2cbc20908816c21d228 200 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 8 186 7.4E-17 T 23-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VV93_RS01075 c7fa92c0dbdba2cbc20908816c21d228 200 SUPERFAMILY SSF54523 12 90 9.42E-8 T 23-04-2016 VV93_RS01075 c7fa92c0dbdba2cbc20908816c21d228 200 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS01075 c7fa92c0dbdba2cbc20908816c21d228 200 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 4.4E-4 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS04895 95d817a6f98a8de701cd265c811c29ed 588 Gene3D G3DSA:3.90.700.10 243 349 5.3E-41 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VV93_RS04895 95d817a6f98a8de701cd265c811c29ed 588 PIRSF PIRSF000171 1 580 4.0E-49 T 23-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit VV93_RS04895 95d817a6f98a8de701cd265c811c29ed 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 23-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 VV93_RS04895 95d817a6f98a8de701cd265c811c29ed 588 Gene3D G3DSA:3.50.50.60 6 242 7.5E-116 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS04895 95d817a6f98a8de701cd265c811c29ed 588 Gene3D G3DSA:3.50.50.60 351 424 7.5E-116 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS04895 95d817a6f98a8de701cd265c811c29ed 588 PANTHER PTHR11632 2 573 0.0 T 23-04-2016 VV93_RS04895 95d817a6f98a8de701cd265c811c29ed 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 1.4E-36 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VV93_RS04895 95d817a6f98a8de701cd265c811c29ed 588 SUPERFAMILY SSF56425 236 356 2.69E-42 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VV93_RS04895 95d817a6f98a8de701cd265c811c29ed 588 SUPERFAMILY SSF51905 5 259 1.76E-71 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS04895 95d817a6f98a8de701cd265c811c29ed 588 SUPERFAMILY SSF51905 359 440 1.76E-71 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS04895 95d817a6f98a8de701cd265c811c29ed 588 Pfam PF00890 FAD binding domain 9 405 6.8E-118 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VV93_RS04895 95d817a6f98a8de701cd265c811c29ed 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 1.5E-274 T 23-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VV93_RS04895 95d817a6f98a8de701cd265c811c29ed 588 SUPERFAMILY SSF46977 451 588 1.96E-46 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VV93_RS04895 95d817a6f98a8de701cd265c811c29ed 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 5.0E-240 T 23-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VV93_RS04895 95d817a6f98a8de701cd265c811c29ed 588 Gene3D G3DSA:4.10.80.40 556 588 4.4E-21 T 23-04-2016 VV93_RS04895 95d817a6f98a8de701cd265c811c29ed 588 Gene3D G3DSA:1.20.58.100 446 555 1.3E-36 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VV93_RS04895 95d817a6f98a8de701cd265c811c29ed 588 PANTHER PTHR11632:SF5 2 573 0.0 T 23-04-2016 VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 Gene3D G3DSA:3.40.228.10 187 393 7.9E-56 T 23-04-2016 VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 23-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 PANTHER PTHR11615:SF133 328 432 0.0 T 23-04-2016 VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 PANTHER PTHR11615:SF133 50 306 0.0 T 23-04-2016 VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 PANTHER PTHR11615:SF133 448 820 0.0 T 23-04-2016 VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 Gene3D G3DSA:2.40.40.20 649 812 1.9E-54 T 23-04-2016 VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 SUPERFAMILY SSF50692 669 817 5.42E-41 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 23-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 1.3E-23 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 Gene3D G3DSA:3.40.50.740 394 504 7.7E-51 T 23-04-2016 VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 Gene3D G3DSA:3.40.50.740 81 181 7.7E-51 T 23-04-2016 VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 SUPERFAMILY SSF53706 42 660 7.59E-169 T 23-04-2016 VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.1E-4 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 Pfam PF00384 Molybdopterin oxidoreductase 87 561 2.1E-80 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 PANTHER PTHR11615 328 432 0.0 T 23-04-2016 VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 PANTHER PTHR11615 50 306 0.0 T 23-04-2016 VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 PANTHER PTHR11615 448 820 0.0 T 23-04-2016 VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 23-04-2016 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 VV93_RS06595 a7a1e328a174f12b507a78f18b5e3059 820 Gene3D G3DSA:3.90.55.10 505 608 9.4E-33 T 23-04-2016 VV93_RS00100 cf1f9ce510d4125e650277372e9016bc 485 PANTHER PTHR32024 1 484 1.8E-269 T 23-04-2016 VV93_RS00100 cf1f9ce510d4125e650277372e9016bc 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 468 1.9E-116 T 23-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VV93_RS00100 cf1f9ce510d4125e650277372e9016bc 485 PIRSF PIRSF006247 1 485 1.4E-177 T 23-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VV93_RS00100 cf1f9ce510d4125e650277372e9016bc 485 Pfam PF02386 Cation transport protein 39 477 3.6E-91 T 23-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VV93_RS00100 cf1f9ce510d4125e650277372e9016bc 485 PANTHER PTHR32024:SF2 1 484 1.8E-269 T 23-04-2016 VV93_RS03475 fc405532e082cadb20a42b9e229faa88 202 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 3.0E-8 T 23-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VV93_RS03475 fc405532e082cadb20a42b9e229faa88 202 SUPERFAMILY SSF52833 1 194 2.71E-67 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS03475 fc405532e082cadb20a42b9e229faa88 202 Pfam PF00578 AhpC/TSA family 4 139 6.5E-34 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 VV93_RS03475 fc405532e082cadb20a42b9e229faa88 202 Gene3D G3DSA:3.40.30.10 3 192 2.2E-69 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS03475 fc405532e082cadb20a42b9e229faa88 202 PIRSF PIRSF000239 1 201 1.6E-60 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 VV93_RS03475 fc405532e082cadb20a42b9e229faa88 202 PANTHER PTHR10681 1 196 2.1E-83 T 23-04-2016 VV93_RS19250 69aa5fa0d054458d67b30113468ba4f2 364 Gene3D G3DSA:1.10.730.10 330 362 9.8E-14 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS19250 69aa5fa0d054458d67b30113468ba4f2 364 SUPERFAMILY SSF50677 1 98 1.44E-29 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VV93_RS19250 69aa5fa0d054458d67b30113468ba4f2 364 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 1 87 1.3E-34 T 23-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 VV93_RS19250 69aa5fa0d054458d67b30113468ba4f2 364 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 101 254 1.1E-9 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS19250 69aa5fa0d054458d67b30113468ba4f2 364 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 301 333 5.0E-8 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS19250 69aa5fa0d054458d67b30113468ba4f2 364 PANTHER PTHR11946 1 253 2.7E-158 T 23-04-2016 VV93_RS19250 69aa5fa0d054458d67b30113468ba4f2 364 PANTHER PTHR11946 296 364 2.7E-158 T 23-04-2016 VV93_RS19250 69aa5fa0d054458d67b30113468ba4f2 364 PANTHER PTHR11946:SF7 1 253 2.7E-158 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VV93_RS19250 69aa5fa0d054458d67b30113468ba4f2 364 PANTHER PTHR11946:SF7 296 364 2.7E-158 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VV93_RS19250 69aa5fa0d054458d67b30113468ba4f2 364 PRINTS PR00985 Leucyl-tRNA synthetase signature 239 249 3.0E-22 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VV93_RS19250 69aa5fa0d054458d67b30113468ba4f2 364 PRINTS PR00985 Leucyl-tRNA synthetase signature 168 186 3.0E-22 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VV93_RS19250 69aa5fa0d054458d67b30113468ba4f2 364 PRINTS PR00985 Leucyl-tRNA synthetase signature 206 228 3.0E-22 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VV93_RS19250 69aa5fa0d054458d67b30113468ba4f2 364 SUPERFAMILY SSF52374 99 350 8.45E-59 T 23-04-2016 VV93_RS19250 69aa5fa0d054458d67b30113468ba4f2 364 Gene3D G3DSA:3.40.50.620 105 255 1.4E-60 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS19250 69aa5fa0d054458d67b30113468ba4f2 364 Gene3D G3DSA:3.40.50.620 300 329 1.4E-60 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS19250 69aa5fa0d054458d67b30113468ba4f2 364 Gene3D G3DSA:3.90.740.10 1 104 1.7E-30 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VV93_RS06170 acc0e9311ec2522729ef075f9552c587 318 Pfam PF13177 DNA polymerase III, delta subunit 10 165 4.7E-43 T 23-04-2016 VV93_RS06170 acc0e9311ec2522729ef075f9552c587 318 PANTHER PTHR11669:SF8 11 178 1.7E-52 T 23-04-2016 VV93_RS06170 acc0e9311ec2522729ef075f9552c587 318 SUPERFAMILY SSF48019 205 317 2.72E-23 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VV93_RS06170 acc0e9311ec2522729ef075f9552c587 318 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 205 312 1.7E-19 T 23-04-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS06170 acc0e9311ec2522729ef075f9552c587 318 PANTHER PTHR11669 11 178 1.7E-52 T 23-04-2016 VV93_RS06170 acc0e9311ec2522729ef075f9552c587 318 Gene3D G3DSA:1.20.272.10 205 317 9.0E-25 T 23-04-2016 VV93_RS06170 acc0e9311ec2522729ef075f9552c587 318 Gene3D G3DSA:3.40.50.300 4 165 7.3E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06170 acc0e9311ec2522729ef075f9552c587 318 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 11 194 4.7E-59 T 23-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS06170 acc0e9311ec2522729ef075f9552c587 318 SUPERFAMILY SSF52540 3 192 1.5E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02235 c061b19b1dea93d1ccf3d8deb46dc635 156 SUPERFAMILY SSF46785 4 77 1.5E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS02235 c061b19b1dea93d1ccf3d8deb46dc635 156 Gene3D G3DSA:1.10.10.10 2 77 4.4E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS02235 c061b19b1dea93d1ccf3d8deb46dc635 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 1.9E-21 T 23-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 VV93_RS02235 c061b19b1dea93d1ccf3d8deb46dc635 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 129 2.0E-16 T 23-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 VV93_RS02235 c061b19b1dea93d1ccf3d8deb46dc635 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 8.4E-24 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VV93_RS02235 c061b19b1dea93d1ccf3d8deb46dc635 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 8.4E-24 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VV93_RS02235 c061b19b1dea93d1ccf3d8deb46dc635 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 8.4E-24 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VV93_RS02235 c061b19b1dea93d1ccf3d8deb46dc635 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 8.4E-24 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VV93_RS02235 c061b19b1dea93d1ccf3d8deb46dc635 156 Gene3D G3DSA:3.30.1360.40 80 154 9.4E-26 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain VV93_RS02235 c061b19b1dea93d1ccf3d8deb46dc635 156 SUPERFAMILY SSF55252 82 151 2.62E-19 T 23-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 VV93_RS02235 c061b19b1dea93d1ccf3d8deb46dc635 156 PANTHER PTHR34471 2 156 3.0E-64 T 23-04-2016 VV93_RS02235 c061b19b1dea93d1ccf3d8deb46dc635 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 3.4E-43 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VV93_RS02235 c061b19b1dea93d1ccf3d8deb46dc635 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.387 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VV93_RS02235 c061b19b1dea93d1ccf3d8deb46dc635 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 2.2E-23 T 23-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 VV93_RS02235 c061b19b1dea93d1ccf3d8deb46dc635 156 PANTHER PTHR34471:SF1 2 156 3.0E-64 T 23-04-2016 VV93_RS05180 ca4fc46500f4a534ebdb3379d39fb477 544 SMART SM00283 282 543 3.3E-81 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS05180 ca4fc46500f4a534ebdb3379d39fb477 544 Pfam PF00672 HAMP domain 196 263 1.1E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS05180 ca4fc46500f4a534ebdb3379d39fb477 544 PANTHER PTHR32089:SF64 179 544 1.1E-115 T 23-04-2016 VV93_RS05180 ca4fc46500f4a534ebdb3379d39fb477 544 SUPERFAMILY SSF58104 235 544 3.01E-75 T 23-04-2016 VV93_RS05180 ca4fc46500f4a534ebdb3379d39fb477 544 Gene3D G3DSA:1.10.287.950 296 512 8.8E-56 T 23-04-2016 VV93_RS05180 ca4fc46500f4a534ebdb3379d39fb477 544 PANTHER PTHR32089 179 544 1.1E-115 T 23-04-2016 VV93_RS05180 ca4fc46500f4a534ebdb3379d39fb477 544 SMART SM00304 213 267 1.3E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS05180 ca4fc46500f4a534ebdb3379d39fb477 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 346 542 3.6E-52 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS14930 d29fc3e5cc8ff790a025d86aa8faef16 444 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 189 418 19.107 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VV93_RS14930 d29fc3e5cc8ff790a025d86aa8faef16 444 PANTHER PTHR20857 204 417 8.3E-54 T 23-04-2016 VV93_RS14930 d29fc3e5cc8ff790a025d86aa8faef16 444 Gene3D G3DSA:3.20.20.70 211 417 1.1E-61 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS14930 d29fc3e5cc8ff790a025d86aa8faef16 444 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 224 411 2.6E-44 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VV93_RS14930 d29fc3e5cc8ff790a025d86aa8faef16 444 Pfam PF02581 Thiamine monophosphate synthase/TENI 222 400 2.9E-54 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VV93_RS14930 d29fc3e5cc8ff790a025d86aa8faef16 444 SUPERFAMILY SSF51391 211 417 2.09E-60 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VV93_RS01810 e651f3df8f75fcb377f25aa66924d9f5 100 PANTHER PTHR11620 9 95 5.5E-35 T 23-04-2016 VV93_RS01810 e651f3df8f75fcb377f25aa66924d9f5 100 Pfam PF00276 Ribosomal protein L23 9 95 1.4E-31 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VV93_RS01810 e651f3df8f75fcb377f25aa66924d9f5 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VV93_RS01810 e651f3df8f75fcb377f25aa66924d9f5 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 23-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site VV93_RS01810 e651f3df8f75fcb377f25aa66924d9f5 100 Gene3D G3DSA:3.30.70.330 6 98 5.1E-36 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 VV93_RS01810 e651f3df8f75fcb377f25aa66924d9f5 100 SUPERFAMILY SSF54189 3 92 3.6E-32 T 23-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS00485 6eedf1d7cca8ca62ffc9a370d3954199 332 Pfam PF12146 Serine aminopeptidase, S33 53 310 2.0E-57 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 VV93_RS00485 6eedf1d7cca8ca62ffc9a370d3954199 332 Gene3D G3DSA:3.40.50.1820 26 326 4.1E-43 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS00485 6eedf1d7cca8ca62ffc9a370d3954199 332 PANTHER PTHR11614 12 331 1.3E-125 T 23-04-2016 VV93_RS00485 6eedf1d7cca8ca62ffc9a370d3954199 332 PANTHER PTHR11614:SF100 12 331 1.3E-125 T 23-04-2016 VV93_RS00485 6eedf1d7cca8ca62ffc9a370d3954199 332 SUPERFAMILY SSF53474 35 324 4.26E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS13020 0bec567528fa752e096b88dceb65a1a0 243 PANTHER PTHR30027:SF3 1 243 4.0E-98 T 23-04-2016 VV93_RS13020 0bec567528fa752e096b88dceb65a1a0 243 Gene3D G3DSA:2.40.240.20 1 70 2.0E-25 T 23-04-2016 VV93_RS13020 0bec567528fa752e096b88dceb65a1a0 243 SUPERFAMILY SSF75217 75 242 5.23E-52 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases VV93_RS13020 0bec567528fa752e096b88dceb65a1a0 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 2.2E-84 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS13020 0bec567528fa752e096b88dceb65a1a0 243 SUPERFAMILY SSF88697 2 70 8.45E-17 T 23-04-2016 IPR015947 PUA-like domain VV93_RS13020 0bec567528fa752e096b88dceb65a1a0 243 PANTHER PTHR30027 1 243 4.0E-98 T 23-04-2016 VV93_RS13020 0bec567528fa752e096b88dceb65a1a0 243 Gene3D G3DSA:3.40.1280.10 75 242 1.5E-59 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VV93_RS13020 0bec567528fa752e096b88dceb65a1a0 243 Pfam PF04452 RNA methyltransferase 19 236 1.5E-74 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS13020 0bec567528fa752e096b88dceb65a1a0 243 PIRSF PIRSF015601 2 242 2.0E-55 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS12900 78b0463e7081107316361cad78785c57 324 PANTHER PTHR22602:SF0 13 307 4.4E-55 T 23-04-2016 VV93_RS12900 78b0463e7081107316361cad78785c57 324 SUPERFAMILY SSF103025 17 237 2.67E-56 T 23-04-2016 VV93_RS12900 78b0463e7081107316361cad78785c57 324 SUPERFAMILY SSF101790 239 322 4.84E-18 T 23-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain VV93_RS12900 78b0463e7081107316361cad78785c57 324 PANTHER PTHR22602 13 307 4.4E-55 T 23-04-2016 VV93_RS12900 78b0463e7081107316361cad78785c57 324 Gene3D G3DSA:3.30.70.1400 30 113 7.3E-32 T 23-04-2016 VV93_RS12900 78b0463e7081107316361cad78785c57 324 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 183 247 9.3E-24 T 23-04-2016 IPR017703 YgfZ/GcvT conserved site VV93_RS12900 78b0463e7081107316361cad78785c57 324 Pfam PF01571 Aminomethyltransferase folate-binding domain 29 153 3.7E-7 T 23-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal VV93_RS12900 78b0463e7081107316361cad78785c57 324 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 318 43.072 T 23-04-2016 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 VV93_RS12300 2754658c3a1d1d976f61f0cf0c09a977 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS12300 2754658c3a1d1d976f61f0cf0c09a977 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 394 3.3E-127 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VV93_RS12300 2754658c3a1d1d976f61f0cf0c09a977 395 Gene3D G3DSA:1.10.240.10 228 327 1.3E-37 T 23-04-2016 VV93_RS12300 2754658c3a1d1d976f61f0cf0c09a977 395 Gene3D G3DSA:3.10.290.10 328 393 5.5E-24 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS12300 2754658c3a1d1d976f61f0cf0c09a977 395 Gene3D G3DSA:3.40.50.620 11 227 9.9E-83 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS12300 2754658c3a1d1d976f61f0cf0c09a977 395 SUPERFAMILY SSF52374 6 316 7.04E-98 T 23-04-2016 VV93_RS12300 2754658c3a1d1d976f61f0cf0c09a977 395 PANTHER PTHR11766:SF1 4 394 8.4E-237 T 23-04-2016 VV93_RS12300 2754658c3a1d1d976f61f0cf0c09a977 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.418 T 23-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 VV93_RS12300 2754658c3a1d1d976f61f0cf0c09a977 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.7E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VV93_RS12300 2754658c3a1d1d976f61f0cf0c09a977 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.7E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VV93_RS12300 2754658c3a1d1d976f61f0cf0c09a977 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.7E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VV93_RS12300 2754658c3a1d1d976f61f0cf0c09a977 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.7E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VV93_RS12300 2754658c3a1d1d976f61f0cf0c09a977 395 SUPERFAMILY SSF55174 320 394 4.32E-15 T 23-04-2016 VV93_RS12300 2754658c3a1d1d976f61f0cf0c09a977 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 4.5E-78 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS12300 2754658c3a1d1d976f61f0cf0c09a977 395 PANTHER PTHR11766 4 394 8.4E-237 T 23-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 VV93_RS13245 88040c20e81673baa2c7b579bf2793ef 443 Pfam PF02378 Phosphotransferase system, EIIC 32 351 5.7E-66 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VV93_RS13245 88040c20e81673baa2c7b579bf2793ef 443 PANTHER PTHR33989 3 443 8.4E-187 T 23-04-2016 VV93_RS13245 88040c20e81673baa2c7b579bf2793ef 443 PIRSF PIRSF006351 4 434 1.4E-148 T 23-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 VV93_RS13245 88040c20e81673baa2c7b579bf2793ef 443 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 425 3.1E-114 T 23-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 VV93_RS13245 88040c20e81673baa2c7b579bf2793ef 443 PANTHER PTHR33989:SF4 3 443 8.4E-187 T 23-04-2016 VV93_RS08145 f404961f78cda82a6277ad3e78a540eb 620 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 424 618 2.1E-42 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS08145 f404961f78cda82a6277ad3e78a540eb 620 Gene3D G3DSA:1.10.287.950 373 588 3.1E-49 T 23-04-2016 VV93_RS08145 f404961f78cda82a6277ad3e78a540eb 620 Pfam PF00672 HAMP domain 271 339 5.6E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS08145 f404961f78cda82a6277ad3e78a540eb 620 PANTHER PTHR32089:SF34 255 620 1.0E-99 T 23-04-2016 VV93_RS08145 f404961f78cda82a6277ad3e78a540eb 620 SMART SM00283 358 619 2.1E-62 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS08145 f404961f78cda82a6277ad3e78a540eb 620 PANTHER PTHR32089 255 620 1.0E-99 T 23-04-2016 VV93_RS08145 f404961f78cda82a6277ad3e78a540eb 620 SUPERFAMILY SSF58104 311 620 4.97E-68 T 23-04-2016 VV93_RS08145 f404961f78cda82a6277ad3e78a540eb 620 SMART SM00304 289 343 4.9E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS12610 7a863519309dcbf9e5e98ba7c595d9b7 458 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VV93_RS12610 7a863519309dcbf9e5e98ba7c595d9b7 458 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 5.3E-22 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VV93_RS12610 7a863519309dcbf9e5e98ba7c595d9b7 458 Gene3D G3DSA:1.20.120.140 2 89 2.2E-35 T 23-04-2016 VV93_RS12610 7a863519309dcbf9e5e98ba7c595d9b7 458 SUPERFAMILY SSF47446 329 430 1.08E-38 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 VV93_RS12610 7a863519309dcbf9e5e98ba7c595d9b7 458 Gene3D G3DSA:1.10.260.30 329 432 5.0E-42 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 VV93_RS12610 7a863519309dcbf9e5e98ba7c595d9b7 458 SMART SM00962 100 296 6.1E-114 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VV93_RS12610 7a863519309dcbf9e5e98ba7c595d9b7 458 SMART SM00963 1 86 1.1E-36 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VV93_RS12610 7a863519309dcbf9e5e98ba7c595d9b7 458 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.251 T 23-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 VV93_RS12610 7a863519309dcbf9e5e98ba7c595d9b7 458 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 8.8E-74 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VV93_RS12610 7a863519309dcbf9e5e98ba7c595d9b7 458 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.8E-179 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 VV93_RS12610 7a863519309dcbf9e5e98ba7c595d9b7 458 SMART SM00382 99 247 2.2E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS12610 7a863519309dcbf9e5e98ba7c595d9b7 458 Pfam PF02978 Signal peptide binding domain 329 427 3.7E-34 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 VV93_RS12610 7a863519309dcbf9e5e98ba7c595d9b7 458 SUPERFAMILY SSF52540 42 353 2.1E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12610 7a863519309dcbf9e5e98ba7c595d9b7 458 PANTHER PTHR11564 1 430 3.8E-272 T 23-04-2016 VV93_RS12610 7a863519309dcbf9e5e98ba7c595d9b7 458 Gene3D G3DSA:3.40.50.300 93 297 2.3E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12610 7a863519309dcbf9e5e98ba7c595d9b7 458 PANTHER PTHR11564:SF7 1 430 3.8E-272 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 VV93_RS09335 5a9162e3130bbb95fe7ce59328b0f3d7 191 Gene3D G3DSA:3.40.630.30 13 183 1.2E-43 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS09335 5a9162e3130bbb95fe7ce59328b0f3d7 191 Pfam PF13302 Acetyltransferase (GNAT) domain 15 158 1.1E-21 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS09335 5a9162e3130bbb95fe7ce59328b0f3d7 191 SUPERFAMILY SSF55729 8 183 1.36E-40 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS09335 5a9162e3130bbb95fe7ce59328b0f3d7 191 PANTHER PTHR13256 13 188 8.4E-69 T 23-04-2016 VV93_RS09335 5a9162e3130bbb95fe7ce59328b0f3d7 191 PANTHER PTHR13256:SF24 13 188 8.4E-69 T 23-04-2016 VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 Pfam PF02254 TrkA-N domain 235 350 4.5E-25 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 Pfam PF02254 TrkA-N domain 3 116 3.9E-29 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 Gene3D G3DSA:3.30.70.1450 390 436 1.7E-4 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 Pfam PF02080 TrkA-C domain 390 449 7.9E-10 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 Pfam PF02080 TrkA-C domain 156 225 4.1E-11 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 PANTHER PTHR13789:SF225 416 440 6.4E-85 T 23-04-2016 VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 PANTHER PTHR13789:SF225 1 170 6.4E-85 T 23-04-2016 VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.0E-33 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 1.0E-33 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 1.0E-33 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 1.0E-33 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.0E-33 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 SUPERFAMILY SSF51735 232 376 3.02E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 PANTHER PTHR13789 416 440 6.4E-85 T 23-04-2016 VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 PANTHER PTHR13789 1 170 6.4E-85 T 23-04-2016 VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 Gene3D G3DSA:3.40.50.720 1 152 6.6E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 Gene3D G3DSA:3.40.50.720 233 376 4.3E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 SUPERFAMILY SSF116726 136 223 1.57E-9 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 SUPERFAMILY SSF51735 1 151 6.55E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS15085 5af121d0d00b2a2f87ea8c680f0737e1 458 SUPERFAMILY SSF116726 390 437 2.75E-7 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV93_RS14115 7285a40459a31c3c2eaa41e4f0f597f8 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VV93_RS14115 7285a40459a31c3c2eaa41e4f0f597f8 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VV93_RS14115 7285a40459a31c3c2eaa41e4f0f597f8 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 2.2E-122 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VV93_RS14115 7285a40459a31c3c2eaa41e4f0f597f8 485 SUPERFAMILY SSF53720 3 449 4.32E-124 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VV93_RS14115 7285a40459a31c3c2eaa41e4f0f597f8 485 Gene3D G3DSA:3.40.605.10 4 256 1.1E-75 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VV93_RS14115 7285a40459a31c3c2eaa41e4f0f597f8 485 Gene3D G3DSA:3.40.309.10 257 442 7.8E-46 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VV93_RS14115 7285a40459a31c3c2eaa41e4f0f597f8 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 7.9E-230 T 23-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 VV93_RS14115 7285a40459a31c3c2eaa41e4f0f597f8 485 PANTHER PTHR11699 1 469 1.2E-285 T 23-04-2016 VV93_RS14115 7285a40459a31c3c2eaa41e4f0f597f8 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 56.921 T 23-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 VV93_RS14115 7285a40459a31c3c2eaa41e4f0f597f8 485 PANTHER PTHR11699:SF197 1 469 1.2E-285 T 23-04-2016 VV93_RS02050 d9c45f9b0f30c9628309cda56433c916 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 9.6E-26 T 23-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VV93_RS02050 d9c45f9b0f30c9628309cda56433c916 115 PANTHER PTHR12510 1 114 4.5E-49 T 23-04-2016 VV93_RS02050 d9c45f9b0f30c9628309cda56433c916 115 PANTHER PTHR12510:SF6 1 114 4.5E-49 T 23-04-2016 VV93_RS02050 d9c45f9b0f30c9628309cda56433c916 115 SUPERFAMILY SSF110857 3 114 3.79E-33 T 23-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VV93_RS02050 d9c45f9b0f30c9628309cda56433c916 115 Gene3D G3DSA:3.10.490.10 1 114 4.3E-40 T 23-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VV93_RS11805 9a6067f8bf671739a8f5b7727932f9ce 255 Pfam PF00455 DeoR C terminal sensor domain 74 232 7.1E-54 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain VV93_RS11805 9a6067f8bf671739a8f5b7727932f9ce 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 5.1E-24 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS11805 9a6067f8bf671739a8f5b7727932f9ce 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.9E-12 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS11805 9a6067f8bf671739a8f5b7727932f9ce 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.9E-12 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS11805 9a6067f8bf671739a8f5b7727932f9ce 255 SMART SM00420 6 58 4.1E-27 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS11805 9a6067f8bf671739a8f5b7727932f9ce 255 SUPERFAMILY SSF100950 74 234 3.84E-30 T 23-04-2016 VV93_RS11805 9a6067f8bf671739a8f5b7727932f9ce 255 PANTHER PTHR30363:SF1 1 253 6.6E-116 T 23-04-2016 VV93_RS11805 9a6067f8bf671739a8f5b7727932f9ce 255 SUPERFAMILY SSF46785 5 75 6.65E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS11805 9a6067f8bf671739a8f5b7727932f9ce 255 SMART SM01134 72 234 4.0E-71 T 23-04-2016 VV93_RS11805 9a6067f8bf671739a8f5b7727932f9ce 255 Gene3D G3DSA:3.30.750.70 75 154 3.9E-15 T 23-04-2016 VV93_RS11805 9a6067f8bf671739a8f5b7727932f9ce 255 PANTHER PTHR30363 1 253 6.6E-116 T 23-04-2016 VV93_RS11805 9a6067f8bf671739a8f5b7727932f9ce 255 Gene3D G3DSA:1.10.10.10 1 55 2.5E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS11805 9a6067f8bf671739a8f5b7727932f9ce 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VV93_RS02685 b30cbae627f95b186ba54e9bb13c1e39 274 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 14 260 42.747 T 23-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 VV93_RS02685 b30cbae627f95b186ba54e9bb13c1e39 274 Gene3D G3DSA:3.60.21.10 11 251 1.7E-40 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like VV93_RS02685 b30cbae627f95b186ba54e9bb13c1e39 274 PANTHER PTHR12905:SF7 50 274 7.7E-93 T 23-04-2016 VV93_RS02685 b30cbae627f95b186ba54e9bb13c1e39 274 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 205 260 3.0E-27 T 23-04-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 VV93_RS02685 b30cbae627f95b186ba54e9bb13c1e39 274 PANTHER PTHR12905:SF7 10 34 7.7E-93 T 23-04-2016 VV93_RS02685 b30cbae627f95b186ba54e9bb13c1e39 274 Pfam PF00149 Calcineurin-like phosphoesterase 15 206 5.3E-15 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VV93_RS02685 b30cbae627f95b186ba54e9bb13c1e39 274 PANTHER PTHR12905 50 274 7.7E-93 T 23-04-2016 VV93_RS02685 b30cbae627f95b186ba54e9bb13c1e39 274 SUPERFAMILY SSF56300 14 272 2.34E-56 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like VV93_RS02685 b30cbae627f95b186ba54e9bb13c1e39 274 PANTHER PTHR12905 10 34 7.7E-93 T 23-04-2016 VV93_RS05670 4e07e0b60a5e35722bd510ccbcd48a04 144 Pfam PF10952 Protein of unknown function (DUF2753) 5 144 1.6E-72 T 23-04-2016 IPR020206 Uncharacterised protein family, VP2110 VV93_RS05670 4e07e0b60a5e35722bd510ccbcd48a04 144 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 1 143 6.0E-72 T 23-04-2016 IPR020206 Uncharacterised protein family, VP2110 VV93_RS00510 004dc0de627065a741c17be50d691d9a 169 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 114 124 - T 23-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 VV93_RS00510 004dc0de627065a741c17be50d691d9a 169 SMART SM00404 72 168 0.0038 T 23-04-2016 IPR003595 Protein-tyrosine phosphatase, catalytic VV93_RS00510 004dc0de627065a741c17be50d691d9a 169 Gene3D G3DSA:3.90.190.10 14 166 6.7E-35 T 23-04-2016 IPR029021 Protein-tyrosine phosphatase-like VV93_RS00510 004dc0de627065a741c17be50d691d9a 169 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 20 133 5.2E-8 T 23-04-2016 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04660+3.1.3.16 VV93_RS00510 004dc0de627065a741c17be50d691d9a 169 SUPERFAMILY SSF52799 17 164 2.72E-30 T 23-04-2016 IPR029021 Protein-tyrosine phosphatase-like VV93_RS00510 004dc0de627065a741c17be50d691d9a 169 PANTHER PTHR23339 32 163 2.6E-16 T 23-04-2016 VV93_RS02845 70de125df46cb9b5966a26c3266c15ee 404 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VV93_RS02845 70de125df46cb9b5966a26c3266c15ee 404 Gene3D G3DSA:3.30.1330.20 215 322 3.5E-47 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain VV93_RS02845 70de125df46cb9b5966a26c3266c15ee 404 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 2.1E-39 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VV93_RS02845 70de125df46cb9b5966a26c3266c15ee 404 SMART SM00864 13 205 1.6E-112 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VV93_RS02845 70de125df46cb9b5966a26c3266c15ee 404 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VV93_RS02845 70de125df46cb9b5966a26c3266c15ee 404 SMART SM00865 207 325 1.4E-55 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain VV93_RS02845 70de125df46cb9b5966a26c3266c15ee 404 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 328 3.2E-136 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 VV93_RS02845 70de125df46cb9b5966a26c3266c15ee 404 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 391 38.123 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 VV93_RS02845 70de125df46cb9b5966a26c3266c15ee 404 Gene3D G3DSA:3.40.50.1440 14 214 7.8E-93 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VV93_RS02845 70de125df46cb9b5966a26c3266c15ee 404 SUPERFAMILY SSF52490 13 208 8.11E-69 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VV93_RS02845 70de125df46cb9b5966a26c3266c15ee 404 Pfam PF12327 FtsZ family, C-terminal domain 222 316 3.8E-36 T 23-04-2016 IPR024757 Cell division protein FtsZ, C-terminal VV93_RS02845 70de125df46cb9b5966a26c3266c15ee 404 PANTHER PTHR30314:SF3 1 402 1.2E-204 T 23-04-2016 VV93_RS02845 70de125df46cb9b5966a26c3266c15ee 404 PRINTS PR00423 Cell division protein FtsZ signature 189 211 5.1E-52 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VV93_RS02845 70de125df46cb9b5966a26c3266c15ee 404 PRINTS PR00423 Cell division protein FtsZ signature 212 233 5.1E-52 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VV93_RS02845 70de125df46cb9b5966a26c3266c15ee 404 PRINTS PR00423 Cell division protein FtsZ signature 126 147 5.1E-52 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VV93_RS02845 70de125df46cb9b5966a26c3266c15ee 404 PRINTS PR00423 Cell division protein FtsZ signature 98 118 5.1E-52 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VV93_RS02845 70de125df46cb9b5966a26c3266c15ee 404 SUPERFAMILY SSF55307 204 320 9.61E-43 T 23-04-2016 IPR008280 Tubulin/FtsZ, C-terminal VV93_RS02845 70de125df46cb9b5966a26c3266c15ee 404 PANTHER PTHR30314 1 402 1.2E-204 T 23-04-2016 VV93_RS04825 22783c04f8856ed67c4e723b4c423fb0 177 PIRSF PIRSF038996 1 174 1.6E-64 T 23-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VV93_RS04825 22783c04f8856ed67c4e723b4c423fb0 177 PANTHER PTHR19384:SF77 143 174 3.3E-105 T 23-04-2016 VV93_RS04825 22783c04f8856ed67c4e723b4c423fb0 177 PANTHER PTHR19384:SF77 1 120 3.3E-105 T 23-04-2016 VV93_RS04825 22783c04f8856ed67c4e723b4c423fb0 177 Pfam PF00258 Flavodoxin 6 162 1.2E-32 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VV93_RS04825 22783c04f8856ed67c4e723b4c423fb0 177 SUPERFAMILY SSF52218 4 173 1.47E-50 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS04825 22783c04f8856ed67c4e723b4c423fb0 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 23-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VV93_RS04825 22783c04f8856ed67c4e723b4c423fb0 177 PANTHER PTHR19384 143 174 3.3E-105 T 23-04-2016 VV93_RS04825 22783c04f8856ed67c4e723b4c423fb0 177 PANTHER PTHR19384 1 120 3.3E-105 T 23-04-2016 VV93_RS04825 22783c04f8856ed67c4e723b4c423fb0 177 Gene3D G3DSA:3.40.50.360 1 171 2.1E-62 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS04825 22783c04f8856ed67c4e723b4c423fb0 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 2.7E-69 T 23-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VV93_RS09095 fefa0a3fe2a911a8eb0623e9a2c88a96 234 SUPERFAMILY SSF48150 39 184 1.73E-38 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VV93_RS09095 fefa0a3fe2a911a8eb0623e9a2c88a96 234 Gene3D G3DSA:1.10.340.30 40 173 4.9E-25 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VV93_RS09095 fefa0a3fe2a911a8eb0623e9a2c88a96 234 Pfam PF03352 Methyladenine glycosylase 43 135 1.8E-15 T 23-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VV93_RS09095 fefa0a3fe2a911a8eb0623e9a2c88a96 234 PANTHER PTHR30037:SF3 176 208 4.6E-74 T 23-04-2016 VV93_RS09095 fefa0a3fe2a911a8eb0623e9a2c88a96 234 PANTHER PTHR30037 176 208 4.6E-74 T 23-04-2016 VV93_RS09095 fefa0a3fe2a911a8eb0623e9a2c88a96 234 PANTHER PTHR30037 1 158 4.6E-74 T 23-04-2016 VV93_RS09095 fefa0a3fe2a911a8eb0623e9a2c88a96 234 PANTHER PTHR30037:SF3 1 158 4.6E-74 T 23-04-2016 VV93_RS19340 bf34822430fb37b8570293cadaeafac4 71 PANTHER PTHR23305:SF12 1 70 4.2E-19 T 23-04-2016 VV93_RS19340 bf34822430fb37b8570293cadaeafac4 71 SUPERFAMILY SSF52540 7 69 1.31E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS19340 bf34822430fb37b8570293cadaeafac4 71 PANTHER PTHR23305 1 70 4.2E-19 T 23-04-2016 VV93_RS04190 a4656ea3d3af869eca5f5612743b38fe 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 3.7E-81 T 23-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VV93_RS04190 a4656ea3d3af869eca5f5612743b38fe 188 PANTHER PTHR23133:SF3 1 183 2.5E-72 T 23-04-2016 VV93_RS04190 a4656ea3d3af869eca5f5612743b38fe 188 Pfam PF13242 HAD-hyrolase-like 107 176 1.1E-12 T 23-04-2016 VV93_RS04190 a4656ea3d3af869eca5f5612743b38fe 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 153 3.3E-39 T 23-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VV93_RS04190 a4656ea3d3af869eca5f5612743b38fe 188 PANTHER PTHR23133 1 183 2.5E-72 T 23-04-2016 VV93_RS04190 a4656ea3d3af869eca5f5612743b38fe 188 SUPERFAMILY SSF56784 4 181 5.75E-48 T 23-04-2016 IPR023214 HAD-like domain VV93_RS04190 a4656ea3d3af869eca5f5612743b38fe 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 155 3.3E-37 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VV93_RS04190 a4656ea3d3af869eca5f5612743b38fe 188 Gene3D G3DSA:3.40.50.1000 3 178 7.1E-60 T 23-04-2016 IPR023214 HAD-like domain VV93_RS04190 a4656ea3d3af869eca5f5612743b38fe 188 PIRSF PIRSF004682 1 186 4.7E-64 T 23-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VV93_RS09810 f9654c652ca8d67f135e4d6f0a319729 280 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 183 268 4.6E-29 T 23-04-2016 IPR005046 Protein of unknown function DUF285 VV93_RS09810 f9654c652ca8d67f135e4d6f0a319729 280 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 1 106 9.2E-31 T 23-04-2016 IPR005046 Protein of unknown function DUF285 VV93_RS09810 f9654c652ca8d67f135e4d6f0a319729 280 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 37 51 9.6E-7 T 23-04-2016 IPR011889 Bacterial surface protein 26-residue repeat VV93_RS09810 f9654c652ca8d67f135e4d6f0a319729 280 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 208 221 4.1E-5 T 23-04-2016 IPR011889 Bacterial surface protein 26-residue repeat VV93_RS09810 f9654c652ca8d67f135e4d6f0a319729 280 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 12 27 4.0E-7 T 23-04-2016 IPR011889 Bacterial surface protein 26-residue repeat VV93_RS09810 f9654c652ca8d67f135e4d6f0a319729 280 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 223 246 1.5E-7 T 23-04-2016 IPR011889 Bacterial surface protein 26-residue repeat VV93_RS09810 f9654c652ca8d67f135e4d6f0a319729 280 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 148 172 1.1E-7 T 23-04-2016 IPR011889 Bacterial surface protein 26-residue repeat VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 SUPERFAMILY SSF82866 782 1008 2.88E-46 T 23-04-2016 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 Gene3D G3DSA:3.30.70.1430 555 650 2.8E-16 T 23-04-2016 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 SUPERFAMILY SSF82714 701 783 1.96E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 SUPERFAMILY SSF82866 290 489 7.32E-47 T 23-04-2016 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 SUPERFAMILY SSF82693 41 130 2.25E-23 T 23-04-2016 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 Gene3D G3DSA:1.20.1640.10 284 500 1.1E-55 T 23-04-2016 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 SUPERFAMILY SSF82693 136 181 1.2E-21 T 23-04-2016 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 SUPERFAMILY SSF82693 267 323 1.2E-21 T 23-04-2016 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 PANTHER PTHR32063:SF28 1 1029 0.0 T 23-04-2016 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 Gene3D G3DSA:3.30.70.1430 41 141 3.7E-28 T 23-04-2016 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 Gene3D G3DSA:3.30.2090.10 700 787 1.9E-19 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 Gene3D G3DSA:3.30.2090.10 181 264 4.4E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 SUPERFAMILY SSF82714 182 263 1.44E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.2E-75 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.2E-75 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.2E-75 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-75 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.2E-75 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.2E-75 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-75 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 1.2E-75 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.2E-75 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 3.7E-277 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 PANTHER PTHR32063 1 1029 0.0 T 23-04-2016 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 Gene3D G3DSA:1.10.3850.10 792 1006 6.3E-57 T 23-04-2016 VV93_RS00185 d619a0851d1155aaff31794ea382d443 1039 SUPERFAMILY SSF82693 553 650 8.89E-22 T 23-04-2016 VV93_RS13725 ff606523d95c1124a7c1f2a11f3d2144 149 Pfam PF01475 Ferric uptake regulator family 20 138 3.3E-19 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VV93_RS13725 ff606523d95c1124a7c1f2a11f3d2144 149 Gene3D G3DSA:1.10.10.10 11 82 7.8E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS13725 ff606523d95c1124a7c1f2a11f3d2144 149 SUPERFAMILY SSF46785 11 144 3.09E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS13725 ff606523d95c1124a7c1f2a11f3d2144 149 PANTHER PTHR33202 7 149 8.2E-64 T 23-04-2016 VV93_RS13725 ff606523d95c1124a7c1f2a11f3d2144 149 PANTHER PTHR33202:SF6 7 149 8.2E-64 T 23-04-2016 VV93_RS11445 35a6af2be844f3255fd9d20398de6d33 452 SUPERFAMILY SSF50156 89 185 2.63E-9 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS11445 35a6af2be844f3255fd9d20398de6d33 452 Gene3D G3DSA:2.30.42.10 225 291 1.4E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS11445 35a6af2be844f3255fd9d20398de6d33 452 Gene3D G3DSA:2.30.42.10 95 183 2.1E-9 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS11445 35a6af2be844f3255fd9d20398de6d33 452 PANTHER PTHR22939 138 452 3.7E-93 T 23-04-2016 VV93_RS11445 35a6af2be844f3255fd9d20398de6d33 452 SUPERFAMILY SSF50156 196 291 7.76E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS11445 35a6af2be844f3255fd9d20398de6d33 452 Pfam PF02163 Peptidase family M50 11 440 1.5E-85 T 23-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 VV93_RS11445 35a6af2be844f3255fd9d20398de6d33 452 SMART SM00228 212 281 1.5E-4 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS11445 35a6af2be844f3255fd9d20398de6d33 452 PANTHER PTHR22939:SF78 138 452 3.7E-93 T 23-04-2016 VV93_RS11445 35a6af2be844f3255fd9d20398de6d33 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 452 4.6E-139 T 23-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 VV93_RS09885 663eeffe253f8d9b1a4e7f97a0b5d5be 418 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 255 410 2.2E-38 T 23-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain VV93_RS09885 663eeffe253f8d9b1a4e7f97a0b5d5be 418 Pfam PF07005 Putative sugar-binding N-terminal domain 3 227 8.5E-69 T 23-04-2016 IPR010737 Putative sugar-binding, N-terminal domain VV93_RS09885 663eeffe253f8d9b1a4e7f97a0b5d5be 418 PANTHER PTHR30304:SF3 121 418 3.2E-113 T 23-04-2016 VV93_RS09885 663eeffe253f8d9b1a4e7f97a0b5d5be 418 PANTHER PTHR30304 121 418 3.2E-113 T 23-04-2016 VV93_RS09885 663eeffe253f8d9b1a4e7f97a0b5d5be 418 SUPERFAMILY SSF142764 3 417 1.29E-130 T 23-04-2016 VV93_RS14605 c1745763b52b5daff16e77dc51fbcb8e 362 PANTHER PTHR22777:SF4 1 354 9.7E-180 T 23-04-2016 VV93_RS14605 c1745763b52b5daff16e77dc51fbcb8e 362 Gene3D G3DSA:3.10.580.10 181 316 2.7E-14 T 23-04-2016 VV93_RS14605 c1745763b52b5daff16e77dc51fbcb8e 362 Pfam PF01595 Domain of unknown function DUF21 9 177 7.5E-29 T 23-04-2016 IPR002550 Domain of unknown function DUF21 VV93_RS14605 c1745763b52b5daff16e77dc51fbcb8e 362 SUPERFAMILY SSF54631 181 315 8.1E-25 T 23-04-2016 VV93_RS14605 c1745763b52b5daff16e77dc51fbcb8e 362 Pfam PF00571 CBS domain 262 313 4.0E-6 T 23-04-2016 IPR000644 CBS domain VV93_RS14605 c1745763b52b5daff16e77dc51fbcb8e 362 PANTHER PTHR22777 1 354 9.7E-180 T 23-04-2016 VV93_RS02090 6cf118f98aedc0a04737343a15d2fd35 234 Gene3D G3DSA:3.40.50.300 1 231 5.3E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02090 6cf118f98aedc0a04737343a15d2fd35 234 SUPERFAMILY SSF52540 1 231 8.79E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02090 6cf118f98aedc0a04737343a15d2fd35 234 PANTHER PTHR24220 1 229 4.2E-100 T 23-04-2016 VV93_RS02090 6cf118f98aedc0a04737343a15d2fd35 234 Pfam PF00005 ABC transporter 18 157 3.6E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS02090 6cf118f98aedc0a04737343a15d2fd35 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS02090 6cf118f98aedc0a04737343a15d2fd35 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 210 5.6E-102 T 23-04-2016 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 VV93_RS02090 6cf118f98aedc0a04737343a15d2fd35 234 PANTHER PTHR24220:SF439 1 229 4.2E-100 T 23-04-2016 VV93_RS02090 6cf118f98aedc0a04737343a15d2fd35 234 SMART SM00382 24 207 1.2E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS14530 d328504f450c6154afc396a81be55a7e 650 Gene3D G3DSA:3.40.50.980 80 266 4.9E-44 T 23-04-2016 VV93_RS14530 d328504f450c6154afc396a81be55a7e 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 3.8E-26 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VV93_RS14530 d328504f450c6154afc396a81be55a7e 650 Gene3D G3DSA:3.40.50.980 267 424 7.6E-27 T 23-04-2016 VV93_RS14530 d328504f450c6154afc396a81be55a7e 650 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 0.0 T 23-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 VV93_RS14530 d328504f450c6154afc396a81be55a7e 650 Pfam PF00501 AMP-binding enzyme 84 523 4.4E-92 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VV93_RS14530 d328504f450c6154afc396a81be55a7e 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 23-04-2016 IPR020845 AMP-binding, conserved site VV93_RS14530 d328504f450c6154afc396a81be55a7e 650 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 52.972 T 23-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 VV93_RS14530 d328504f450c6154afc396a81be55a7e 650 PANTHER PTHR24095 6 648 0.0 T 23-04-2016 VV93_RS14530 d328504f450c6154afc396a81be55a7e 650 PANTHER PTHR24095:SF178 6 648 0.0 T 23-04-2016 VV93_RS14530 d328504f450c6154afc396a81be55a7e 650 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 2.4E-20 T 23-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 VV93_RS14530 d328504f450c6154afc396a81be55a7e 650 Gene3D G3DSA:3.30.300.30 519 639 2.7E-28 T 23-04-2016 VV93_RS14530 d328504f450c6154afc396a81be55a7e 650 SUPERFAMILY SSF56801 10 644 4.45E-184 T 23-04-2016 VV93_RS14530 d328504f450c6154afc396a81be55a7e 650 Gene3D G3DSA:2.30.38.10 439 516 1.4E-8 T 23-04-2016 VV93_RS14680 98f17b9fee2d42ba618b2b0eb6663b30 182 Gene3D G3DSA:2.30.30.30 120 181 1.9E-31 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 VV93_RS14680 98f17b9fee2d42ba618b2b0eb6663b30 182 SUPERFAMILY SSF50104 126 181 1.05E-19 T 23-04-2016 IPR008991 Translation protein SH3-like domain VV93_RS14680 98f17b9fee2d42ba618b2b0eb6663b30 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 1.1E-70 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VV93_RS14680 98f17b9fee2d42ba618b2b0eb6663b30 182 Gene3D G3DSA:3.30.70.940 6 117 2.2E-44 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 VV93_RS14680 98f17b9fee2d42ba618b2b0eb6663b30 182 SMART SM00739 127 154 7.0E-5 T 23-04-2016 IPR005824 KOW VV93_RS14680 98f17b9fee2d42ba618b2b0eb6663b30 182 Pfam PF02357 Transcription termination factor nusG 7 112 4.3E-27 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 VV93_RS14680 98f17b9fee2d42ba618b2b0eb6663b30 182 SUPERFAMILY SSF82679 6 116 1.44E-40 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 VV93_RS14680 98f17b9fee2d42ba618b2b0eb6663b30 182 SMART SM00738 6 115 3.2E-51 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 VV93_RS14680 98f17b9fee2d42ba618b2b0eb6663b30 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VV93_RS14680 98f17b9fee2d42ba618b2b0eb6663b30 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VV93_RS14680 98f17b9fee2d42ba618b2b0eb6663b30 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VV93_RS14680 98f17b9fee2d42ba618b2b0eb6663b30 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 23-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site VV93_RS14680 98f17b9fee2d42ba618b2b0eb6663b30 182 Pfam PF00467 KOW motif 130 162 1.7E-7 T 23-04-2016 IPR005824 KOW VV93_RS14680 98f17b9fee2d42ba618b2b0eb6663b30 182 PANTHER PTHR30265 3 182 5.2E-85 T 23-04-2016 VV93_RS14680 98f17b9fee2d42ba618b2b0eb6663b30 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 26.01 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VV93_RS05270 f394b9404a525ba89dd3b41c54d65e96 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.9E-21 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS05270 f394b9404a525ba89dd3b41c54d65e96 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.9E-21 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS05270 f394b9404a525ba89dd3b41c54d65e96 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.9E-21 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS05270 f394b9404a525ba89dd3b41c54d65e96 90 PANTHER PTHR33175 1 90 3.9E-44 T 23-04-2016 VV93_RS05270 f394b9404a525ba89dd3b41c54d65e96 90 SUPERFAMILY SSF47729 1 90 1.32E-31 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VV93_RS05270 f394b9404a525ba89dd3b41c54d65e96 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.2E-33 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS05270 f394b9404a525ba89dd3b41c54d65e96 90 SMART SM00411 1 90 4.3E-43 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VV93_RS05270 f394b9404a525ba89dd3b41c54d65e96 90 Gene3D G3DSA:4.10.520.10 1 90 1.4E-36 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VV93_RS05270 f394b9404a525ba89dd3b41c54d65e96 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VV93_RS11300 2bae8099a4323100e809d2604e5c1618 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.658 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VV93_RS11300 2bae8099a4323100e809d2604e5c1618 346 Gene3D G3DSA:3.30.1330.10 23 171 4.9E-65 T 23-04-2016 IPR016188 PurM-like, N-terminal domain VV93_RS11300 2bae8099a4323100e809d2604e5c1618 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 165 2.4E-15 T 23-04-2016 IPR016188 PurM-like, N-terminal domain VV93_RS11300 2bae8099a4323100e809d2604e5c1618 346 SUPERFAMILY SSF55326 8 171 1.94E-54 T 23-04-2016 VV93_RS11300 2bae8099a4323100e809d2604e5c1618 346 Gene3D G3DSA:3.90.650.10 173 343 1.4E-67 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VV93_RS11300 2bae8099a4323100e809d2604e5c1618 346 PANTHER PTHR10520 8 346 6.8E-225 T 23-04-2016 VV93_RS11300 2bae8099a4323100e809d2604e5c1618 346 SUPERFAMILY SSF56042 172 342 8.07E-61 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VV93_RS11300 2bae8099a4323100e809d2604e5c1618 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 1.7E-151 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VV93_RS11300 2bae8099a4323100e809d2604e5c1618 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 338 1.3E-38 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 Pfam PF13184 NusA-like KH domain 230 297 6.5E-27 T 23-04-2016 IPR025249 KH domain, NusA-like GO:0003723 VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 SMART SM00316 133 198 4.1E-6 T 23-04-2016 IPR022967 RNA-binding domain, S1 VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 Gene3D G3DSA:1.10.150.20 356 419 1.2E-22 T 23-04-2016 VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.9E-123 T 23-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 PANTHER PTHR22648:SF0 1 448 6.5E-185 T 23-04-2016 VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 SUPERFAMILY SSF47794 429 492 3.61E-16 T 23-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 SUPERFAMILY SSF47794 356 415 8.16E-17 T 23-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 Gene3D G3DSA:3.30.300.20 199 277 2.4E-33 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 Gene3D G3DSA:1.10.150.20 432 490 3.4E-23 T 23-04-2016 VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 Gene3D G3DSA:3.30.1480.10 1 124 4.1E-44 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 2.0E-8 T 23-04-2016 VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 SUPERFAMILY SSF50249 132 199 1.2E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 4.0E-21 T 23-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 9.0E-18 T 23-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 SUPERFAMILY SSF69705 1 126 2.35E-39 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 Pfam PF08529 NusA N-terminal domain 4 123 2.7E-35 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 Gene3D G3DSA:2.40.50.140 128 197 7.4E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 PANTHER PTHR22648 1 448 6.5E-185 T 23-04-2016 VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 Gene3D G3DSA:3.30.300.20 278 347 2.4E-27 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 SUPERFAMILY SSF54814 279 343 3.66E-15 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 28.603 T 23-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 VV93_RS12225 786097aeef39b7a646656b9259673bfe 495 SUPERFAMILY SSF54814 201 278 1.24E-28 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VV93_RS00380 cd1d33a529ccb3837dca586275e76bad 141 SUPERFAMILY SSF52402 3 138 4.19E-33 T 23-04-2016 VV93_RS00380 cd1d33a529ccb3837dca586275e76bad 141 Pfam PF00582 Universal stress protein family 3 138 1.4E-21 T 23-04-2016 IPR006016 UspA GO:0006950 VV93_RS00380 cd1d33a529ccb3837dca586275e76bad 141 PIRSF PIRSF006276 1 141 3.6E-53 T 23-04-2016 IPR006015 Universal stress protein A VV93_RS00380 cd1d33a529ccb3837dca586275e76bad 141 Gene3D G3DSA:3.40.50.620 3 140 3.2E-31 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS15250 2b196c4b6d57247c4ab7354f81e24742 632 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 23-04-2016 IPR020595 MnmG-related, conserved site VV93_RS15250 2b196c4b6d57247c4ab7354f81e24742 632 SMART SM01228 546 617 1.1E-43 T 23-04-2016 VV93_RS15250 2b196c4b6d57247c4ab7354f81e24742 632 SUPERFAMILY SSF51905 6 66 5.52E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS15250 2b196c4b6d57247c4ab7354f81e24742 632 SUPERFAMILY SSF51905 97 261 5.52E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS15250 2b196c4b6d57247c4ab7354f81e24742 632 Pfam PF13932 GidA associated domain 403 616 2.4E-71 T 23-04-2016 IPR026904 GidA associated domain 3 VV93_RS15250 2b196c4b6d57247c4ab7354f81e24742 632 Pfam PF01134 Glucose inhibited division protein A 8 399 9.4E-170 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 VV93_RS15250 2b196c4b6d57247c4ab7354f81e24742 632 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 621 1.8E-293 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 VV93_RS15250 2b196c4b6d57247c4ab7354f81e24742 632 PANTHER PTHR11806:SF0 1 621 0.0 T 23-04-2016 VV93_RS15250 2b196c4b6d57247c4ab7354f81e24742 632 Gene3D G3DSA:3.50.50.60 7 234 5.1E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS15250 2b196c4b6d57247c4ab7354f81e24742 632 PANTHER PTHR11806 1 621 0.0 T 23-04-2016 VV93_RS15250 2b196c4b6d57247c4ab7354f81e24742 632 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 23-04-2016 IPR020595 MnmG-related, conserved site VV93_RS15250 2b196c4b6d57247c4ab7354f81e24742 632 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.461 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 VV93_RS06035 1fff55bcf3a0c3d4d89beb307a1623b8 318 PANTHER PTHR34856:SF2 8 316 2.4E-93 T 23-04-2016 VV93_RS06035 1fff55bcf3a0c3d4d89beb307a1623b8 318 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 6 318 2.4E-149 T 23-04-2016 IPR017566 NrfD VV93_RS06035 1fff55bcf3a0c3d4d89beb307a1623b8 318 Pfam PF03916 Polysulphide reductase, NrfD 6 317 3.8E-75 T 23-04-2016 IPR005614 NrfD family VV93_RS06035 1fff55bcf3a0c3d4d89beb307a1623b8 318 PANTHER PTHR34856 8 316 2.4E-93 T 23-04-2016 VV93_RS06035 1fff55bcf3a0c3d4d89beb307a1623b8 318 Gene3D G3DSA:1.20.1630.10 14 198 2.0E-7 T 23-04-2016 VV93_RS04805 a6c7b1784d793bfcda2388fcb60ef478 523 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 498 1.9E-23 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VV93_RS04805 a6c7b1784d793bfcda2388fcb60ef478 523 Pfam PF00367 phosphotransferase system, EIIB 440 473 3.1E-13 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VV93_RS04805 a6c7b1784d793bfcda2388fcb60ef478 523 SUPERFAMILY SSF55604 438 510 5.75E-20 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VV93_RS04805 a6c7b1784d793bfcda2388fcb60ef478 523 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 509 7.5E-209 T 23-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 VV93_RS04805 a6c7b1784d793bfcda2388fcb60ef478 523 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 451 468 - T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VV93_RS04805 a6c7b1784d793bfcda2388fcb60ef478 523 Gene3D G3DSA:3.30.1360.60 436 511 7.8E-26 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VV93_RS04805 a6c7b1784d793bfcda2388fcb60ef478 523 PANTHER PTHR30009:SF4 265 523 4.1E-239 T 23-04-2016 VV93_RS04805 a6c7b1784d793bfcda2388fcb60ef478 523 PANTHER PTHR30009:SF4 4 249 4.1E-239 T 23-04-2016 VV93_RS04805 a6c7b1784d793bfcda2388fcb60ef478 523 PANTHER PTHR30009 265 523 4.1E-239 T 23-04-2016 VV93_RS04805 a6c7b1784d793bfcda2388fcb60ef478 523 PANTHER PTHR30009 4 249 4.1E-239 T 23-04-2016 VV93_RS04805 a6c7b1784d793bfcda2388fcb60ef478 523 Pfam PF02378 Phosphotransferase system, EIIC 11 353 4.7E-65 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VV93_RS04180 972c997f0e1776995f082c1576a53746 225 PANTHER PTHR30450:SF1 1 225 2.1E-120 T 23-04-2016 VV93_RS04180 972c997f0e1776995f082c1576a53746 225 SUPERFAMILY SSF161098 15 210 1.03E-47 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS04180 972c997f0e1776995f082c1576a53746 225 PANTHER PTHR30450 1 225 2.1E-120 T 23-04-2016 VV93_RS04180 972c997f0e1776995f082c1576a53746 225 Gene3D G3DSA:1.10.3720.10 14 224 6.7E-45 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS04180 972c997f0e1776995f082c1576a53746 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 9.7E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS15310 8bc13bc0a2aefcaaef7f53d6d533ff13 399 PANTHER PTHR30408:SF2 1 205 2.3E-17 T 23-04-2016 VV93_RS15310 8bc13bc0a2aefcaaef7f53d6d533ff13 399 Pfam PF01420 Type I restriction modification DNA specificity domain 206 376 5.5E-13 T 23-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VV93_RS15310 8bc13bc0a2aefcaaef7f53d6d533ff13 399 Pfam PF01420 Type I restriction modification DNA specificity domain 31 177 2.7E-13 T 23-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VV93_RS15310 8bc13bc0a2aefcaaef7f53d6d533ff13 399 SUPERFAMILY SSF116734 206 399 1.5E-27 T 23-04-2016 VV93_RS15310 8bc13bc0a2aefcaaef7f53d6d533ff13 399 PANTHER PTHR30408 1 205 2.3E-17 T 23-04-2016 VV93_RS15310 8bc13bc0a2aefcaaef7f53d6d533ff13 399 SUPERFAMILY SSF116734 4 205 8.34E-40 T 23-04-2016 VV93_RS04630 8e9d3be736b69f769e7f161856cfa00d 377 PANTHER PTHR30244:SF1 2 376 5.0E-165 T 23-04-2016 VV93_RS04630 8e9d3be736b69f769e7f161856cfa00d 377 PANTHER PTHR30244 2 376 5.0E-165 T 23-04-2016 VV93_RS04630 8e9d3be736b69f769e7f161856cfa00d 377 SUPERFAMILY SSF64518 1 376 1.44E-97 T 23-04-2016 VV93_RS04630 8e9d3be736b69f769e7f161856cfa00d 377 Pfam PF07196 Flagellin hook IN motif 195 249 2.2E-9 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VV93_RS04630 8e9d3be736b69f769e7f161856cfa00d 377 Gene3D G3DSA:1.20.1330.10 55 171 7.3E-61 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS04630 8e9d3be736b69f769e7f161856cfa00d 377 Gene3D G3DSA:1.20.1330.10 279 332 7.3E-61 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS04630 8e9d3be736b69f769e7f161856cfa00d 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.4E-25 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS04630 8e9d3be736b69f769e7f161856cfa00d 377 PRINTS PR00207 Flagellin signature 37 54 1.9E-27 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV93_RS04630 8e9d3be736b69f769e7f161856cfa00d 377 PRINTS PR00207 Flagellin signature 111 134 1.9E-27 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV93_RS04630 8e9d3be736b69f769e7f161856cfa00d 377 PRINTS PR00207 Flagellin signature 76 95 1.9E-27 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV93_RS04630 8e9d3be736b69f769e7f161856cfa00d 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 6.7E-43 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS06150 33ca83cbfd50585697bf8eec762a4704 413 Gene3D G3DSA:3.40.47.10 2 260 4.4E-79 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS06150 33ca83cbfd50585697bf8eec762a4704 413 PIRSF PIRSF000447 1 413 1.8E-204 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 VV93_RS06150 33ca83cbfd50585697bf8eec762a4704 413 SMART SM00825 Beta-ketoacyl synthase 6 413 9.5E-15 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VV93_RS06150 33ca83cbfd50585697bf8eec762a4704 413 Gene3D G3DSA:3.40.47.10 263 412 3.5E-58 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS06150 33ca83cbfd50585697bf8eec762a4704 413 SUPERFAMILY SSF53901 3 252 2.25E-80 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS06150 33ca83cbfd50585697bf8eec762a4704 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 1.5E-194 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 VV93_RS06150 33ca83cbfd50585697bf8eec762a4704 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.7E-63 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VV93_RS06150 33ca83cbfd50585697bf8eec762a4704 413 SUPERFAMILY SSF53901 215 412 5.38E-67 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS06150 33ca83cbfd50585697bf8eec762a4704 413 PANTHER PTHR11712 3 412 3.7E-208 T 23-04-2016 VV93_RS06150 33ca83cbfd50585697bf8eec762a4704 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 1.1E-35 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal VV93_RS06150 33ca83cbfd50585697bf8eec762a4704 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site VV93_RS11335 49557d3281627d1f1348fd13952f85a5 649 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 303 2.2E-74 T 23-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 VV93_RS11335 49557d3281627d1f1348fd13952f85a5 649 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 6.9E-58 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VV93_RS11335 49557d3281627d1f1348fd13952f85a5 649 PANTHER PTHR16254 1 576 1.4E-192 T 23-04-2016 VV93_RS11335 49557d3281627d1f1348fd13952f85a5 649 PANTHER PTHR16254:SF6 1 576 1.4E-192 T 23-04-2016 VV93_RS11335 49557d3281627d1f1348fd13952f85a5 649 SUPERFAMILY SSF51735 421 547 1.05E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS11335 49557d3281627d1f1348fd13952f85a5 649 Gene3D G3DSA:3.40.50.720 417 548 5.2E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS11335 49557d3281627d1f1348fd13952f85a5 649 Pfam PF02254 TrkA-N domain 422 535 2.8E-23 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VV93_RS13215 87f9b2cc81ffac57399b7ea1ee12bdee 418 Pfam PF11871 Domain of unknown function (DUF3391) 4 138 6.8E-30 T 23-04-2016 IPR021812 Protein of unknown function DUF3391 VV93_RS13215 87f9b2cc81ffac57399b7ea1ee12bdee 418 SMART SM00471 165 301 1.9E-7 T 23-04-2016 IPR003607 HD/PDEase domain VV93_RS13215 87f9b2cc81ffac57399b7ea1ee12bdee 418 TIGRFAM TIGR00277 HDIG: HDIG domain 167 260 2.6E-7 T 23-04-2016 IPR006675 HDIG domain VV93_RS13215 87f9b2cc81ffac57399b7ea1ee12bdee 418 SUPERFAMILY SSF109604 160 331 2.47E-26 T 23-04-2016 VV93_RS13215 87f9b2cc81ffac57399b7ea1ee12bdee 418 Gene3D G3DSA:1.10.3210.10 167 315 1.9E-17 T 23-04-2016 IPR006674 HD domain VV93_RS13215 87f9b2cc81ffac57399b7ea1ee12bdee 418 Pfam PF01966 HD domain 171 291 2.7E-15 T 23-04-2016 IPR006674 HD domain VV93_RS00720 4920500efdeb56302b40857a6a4ad049 460 Pfam PF04851 Type III restriction enzyme, res subunit 2 76 1.5E-5 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VV93_RS00720 4920500efdeb56302b40857a6a4ad049 460 Gene3D G3DSA:3.40.50.300 257 380 1.4E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00720 4920500efdeb56302b40857a6a4ad049 460 SUPERFAMILY SSF52540 16 157 1.45E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00720 4920500efdeb56302b40857a6a4ad049 460 SUPERFAMILY SSF52540 226 355 1.45E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00720 4920500efdeb56302b40857a6a4ad049 460 Gene3D G3DSA:3.40.50.300 2 160 3.0E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09275 ff6ade3ed80431617221fc1bea7b25a7 519 PIRSF PIRSF028991 5 514 6.2E-288 T 23-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted VV93_RS09275 ff6ade3ed80431617221fc1bea7b25a7 519 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 10 502 1.5E-240 T 23-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted VV93_RS09275 ff6ade3ed80431617221fc1bea7b25a7 519 Gene3D G3DSA:3.20.70.20 89 248 1.2E-8 T 23-04-2016 VV93_RS09275 ff6ade3ed80431617221fc1bea7b25a7 519 SUPERFAMILY SSF51998 24 468 7.32E-89 T 23-04-2016 VV93_RS09275 ff6ade3ed80431617221fc1bea7b25a7 519 Pfam PF11230 Protein of unknown function (DUF3029) 21 502 1.2E-227 T 23-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted VV93_RS06655 2a382ac0e605de57faacc62f5f76efe9 295 PANTHER PTHR30465:SF49 7 295 1.1E-160 T 23-04-2016 VV93_RS06655 2a382ac0e605de57faacc62f5f76efe9 295 Gene3D G3DSA:1.10.3720.10 88 291 2.1E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06655 2a382ac0e605de57faacc62f5f76efe9 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 4.6E-15 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VV93_RS06655 2a382ac0e605de57faacc62f5f76efe9 295 PANTHER PTHR30465 7 295 1.1E-160 T 23-04-2016 VV93_RS06655 2a382ac0e605de57faacc62f5f76efe9 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 9.6E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06655 2a382ac0e605de57faacc62f5f76efe9 295 SUPERFAMILY SSF161098 89 276 2.62E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS01965 d5ca693af7b7bafd7e288416d4dca056 653 SUPERFAMILY SSF55816 361 603 1.57E-36 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VV93_RS01965 d5ca693af7b7bafd7e288416d4dca056 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 23-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VV93_RS01965 d5ca693af7b7bafd7e288416d4dca056 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 362 554 1.8E-21 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VV93_RS01965 d5ca693af7b7bafd7e288416d4dca056 653 SUPERFAMILY SSF56300 23 360 6.54E-87 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like VV93_RS01965 d5ca693af7b7bafd7e288416d4dca056 653 Gene3D G3DSA:3.60.21.10 18 365 3.8E-95 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like VV93_RS01965 d5ca693af7b7bafd7e288416d4dca056 653 PRINTS PR01607 Apyrase family signature 221 238 4.1E-30 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS01965 d5ca693af7b7bafd7e288416d4dca056 653 PRINTS PR01607 Apyrase family signature 249 272 4.1E-30 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS01965 d5ca693af7b7bafd7e288416d4dca056 653 PRINTS PR01607 Apyrase family signature 28 46 4.1E-30 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS01965 d5ca693af7b7bafd7e288416d4dca056 653 PRINTS PR01607 Apyrase family signature 434 457 4.1E-30 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS01965 d5ca693af7b7bafd7e288416d4dca056 653 PRINTS PR01607 Apyrase family signature 289 309 4.1E-30 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS01965 d5ca693af7b7bafd7e288416d4dca056 653 PRINTS PR01607 Apyrase family signature 536 555 4.1E-30 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS01965 d5ca693af7b7bafd7e288416d4dca056 653 PANTHER PTHR11575:SF6 1 651 0.0 T 23-04-2016 VV93_RS01965 d5ca693af7b7bafd7e288416d4dca056 653 Gene3D G3DSA:3.90.780.10 366 602 2.4E-40 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VV93_RS01965 d5ca693af7b7bafd7e288416d4dca056 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 653 0.0 T 23-04-2016 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 VV93_RS01965 d5ca693af7b7bafd7e288416d4dca056 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 3.9E-10 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VV93_RS01965 d5ca693af7b7bafd7e288416d4dca056 653 PANTHER PTHR11575 1 651 0.0 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VV93_RS04705 93c5af4ff7268d5989d622590bccb69a 308 Gene3D G3DSA:3.90.25.10 206 280 3.2E-7 T 23-04-2016 VV93_RS04705 93c5af4ff7268d5989d622590bccb69a 308 PANTHER PTHR11092:SF0 1 308 7.3E-134 T 23-04-2016 VV93_RS04705 93c5af4ff7268d5989d622590bccb69a 308 Pfam PF08338 Domain of unknown function (DUF1731) 257 303 1.5E-15 T 23-04-2016 IPR013549 Domain of unknown function DUF1731 VV93_RS04705 93c5af4ff7268d5989d622590bccb69a 308 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 7 300 1.3E-102 T 23-04-2016 IPR010099 Epimerase family protein SDR39U1 VV93_RS04705 93c5af4ff7268d5989d622590bccb69a 308 SUPERFAMILY SSF51735 5 301 1.14E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS04705 93c5af4ff7268d5989d622590bccb69a 308 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 230 9.3E-21 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 VV93_RS04705 93c5af4ff7268d5989d622590bccb69a 308 PANTHER PTHR11092 1 308 7.3E-134 T 23-04-2016 IPR010099 Epimerase family protein SDR39U1 VV93_RS04705 93c5af4ff7268d5989d622590bccb69a 308 Gene3D G3DSA:3.40.50.720 4 205 5.2E-23 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS14645 e8a853986f05d084f76ffab258bec287 164 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 154 3.9E-54 T 23-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VV93_RS14645 e8a853986f05d084f76ffab258bec287 164 PIRSF PIRSF016548 3 164 5.2E-72 T 23-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VV93_RS09365 118c39b916381bec9ec59ae83c08a25b 466 SUPERFAMILY SSF56322 22 465 2.49E-145 T 23-04-2016 IPR005801 ADC synthase GO:0009058 VV93_RS09365 118c39b916381bec9ec59ae83c08a25b 466 Pfam PF04715 Anthranilate synthase component I, N terminal region 37 168 4.0E-27 T 23-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VV93_RS09365 118c39b916381bec9ec59ae83c08a25b 466 PRINTS PR00095 Anthranilate synthase component I signature 399 413 2.9E-18 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VV93_RS09365 118c39b916381bec9ec59ae83c08a25b 466 PRINTS PR00095 Anthranilate synthase component I signature 319 332 2.9E-18 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VV93_RS09365 118c39b916381bec9ec59ae83c08a25b 466 PRINTS PR00095 Anthranilate synthase component I signature 305 318 2.9E-18 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VV93_RS09365 118c39b916381bec9ec59ae83c08a25b 466 PRINTS PR00095 Anthranilate synthase component I signature 414 428 2.9E-18 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VV93_RS09365 118c39b916381bec9ec59ae83c08a25b 466 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 122 458 6.0E-126 T 23-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 VV93_RS09365 118c39b916381bec9ec59ae83c08a25b 466 PANTHER PTHR11236:SF18 1 466 7.0E-168 T 23-04-2016 VV93_RS09365 118c39b916381bec9ec59ae83c08a25b 466 PANTHER PTHR11236 1 466 7.0E-168 T 23-04-2016 VV93_RS09365 118c39b916381bec9ec59ae83c08a25b 466 Gene3D G3DSA:3.60.120.10 21 465 6.4E-156 T 23-04-2016 IPR005801 ADC synthase GO:0009058 VV93_RS09365 118c39b916381bec9ec59ae83c08a25b 466 Pfam PF00425 chorismate binding enzyme 204 457 1.6E-97 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal VV93_RS01945 00916f1335e48b9abbb3a0e3a9b0b2b9 187 Pfam PF04225 Opacity-associated protein A LysM-like domain 103 187 8.0E-39 T 23-04-2016 IPR007340 Opacity-associated protein A VV93_RS01945 00916f1335e48b9abbb3a0e3a9b0b2b9 187 Pfam PF08525 Opacity-associated protein A N-terminal motif 36 63 9.3E-9 T 23-04-2016 IPR013731 Opacity-associated protein A, N-terminal VV93_RS01425 658e75b1198924c353e4bff213d5d76c 238 PANTHER PTHR11953 1 238 1.6E-86 T 23-04-2016 VV93_RS01425 658e75b1198924c353e4bff213d5d76c 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 9.4E-11 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VV93_RS01425 658e75b1198924c353e4bff213d5d76c 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 23-04-2016 IPR018336 Ribonuclease PH, conserved site VV93_RS01425 658e75b1198924c353e4bff213d5d76c 238 PANTHER PTHR11953:SF0 1 238 1.6E-86 T 23-04-2016 VV93_RS01425 658e75b1198924c353e4bff213d5d76c 238 Gene3D G3DSA:3.30.230.70 8 237 3.6E-36 T 23-04-2016 IPR027408 PNPase/RNase PH domain VV93_RS01425 658e75b1198924c353e4bff213d5d76c 238 SUPERFAMILY SSF55666 153 236 1.14E-25 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VV93_RS01425 658e75b1198924c353e4bff213d5d76c 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 6.5E-24 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 VV93_RS01425 658e75b1198924c353e4bff213d5d76c 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.8E-111 T 23-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 VV93_RS01425 658e75b1198924c353e4bff213d5d76c 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 48.128 T 23-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 VV93_RS01425 658e75b1198924c353e4bff213d5d76c 238 SUPERFAMILY SSF54211 1 181 8.6E-45 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS02080 f7f23c82b1e9650728b73e93e06df9b4 335 PANTHER PTHR30006:SF3 5 335 2.1E-126 T 23-04-2016 VV93_RS02080 f7f23c82b1e9650728b73e93e06df9b4 335 Pfam PF13343 Bacterial extracellular solute-binding protein 81 297 1.4E-19 T 23-04-2016 VV93_RS02080 f7f23c82b1e9650728b73e93e06df9b4 335 PANTHER PTHR30006 5 335 2.1E-126 T 23-04-2016 VV93_RS02080 f7f23c82b1e9650728b73e93e06df9b4 335 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 26 329 8.1E-143 T 23-04-2016 IPR005948 Thiamine ABC transporter periplasmic binding protein GO:0005215|GO:0006810|GO:0015888|GO:0030288|GO:0030975 VV93_RS02080 f7f23c82b1e9650728b73e93e06df9b4 335 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 19 334 1.1E-148 T 23-04-2016 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein GO:0005524|GO:0015888|GO:0030288|GO:0048502 VV93_RS02080 f7f23c82b1e9650728b73e93e06df9b4 335 Gene3D G3DSA:3.40.190.10 26 130 2.4E-11 T 23-04-2016 VV93_RS02080 f7f23c82b1e9650728b73e93e06df9b4 335 Gene3D G3DSA:3.40.190.10 267 292 2.4E-11 T 23-04-2016 VV93_RS02080 f7f23c82b1e9650728b73e93e06df9b4 335 Gene3D G3DSA:3.40.190.10 131 266 2.6E-24 T 23-04-2016 VV93_RS02080 f7f23c82b1e9650728b73e93e06df9b4 335 SUPERFAMILY SSF53850 29 330 8.16E-66 T 23-04-2016 VV93_RS01930 dbae8455d88ce1c4540f06f7422c52ec 127 Pfam PF01196 Ribosomal protein L17 20 116 9.5E-35 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01930 dbae8455d88ce1c4540f06f7422c52ec 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.7E-49 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01930 dbae8455d88ce1c4540f06f7422c52ec 127 Gene3D G3DSA:3.90.1030.10 1 117 3.1E-51 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01930 dbae8455d88ce1c4540f06f7422c52ec 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01930 dbae8455d88ce1c4540f06f7422c52ec 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.798 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01930 dbae8455d88ce1c4540f06f7422c52ec 127 SUPERFAMILY SSF64263 1 119 5.49E-51 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01930 dbae8455d88ce1c4540f06f7422c52ec 127 PANTHER PTHR14413 1 119 3.5E-66 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13540 b41823e75d742ee16fab9d0f80fa14a4 574 Gene3D G3DSA:3.30.450.90 158 286 1.6E-46 T 23-04-2016 VV93_RS13540 b41823e75d742ee16fab9d0f80fa14a4 574 PANTHER PTHR30258 1 571 0.0 T 23-04-2016 VV93_RS13540 b41823e75d742ee16fab9d0f80fa14a4 574 SUPERFAMILY SSF52540 170 559 4.14E-92 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13540 b41823e75d742ee16fab9d0f80fa14a4 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 2.9E-23 T 23-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 VV93_RS13540 b41823e75d742ee16fab9d0f80fa14a4 574 PANTHER PTHR30258:SF11 1 571 0.0 T 23-04-2016 VV93_RS13540 b41823e75d742ee16fab9d0f80fa14a4 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VV93_RS13540 b41823e75d742ee16fab9d0f80fa14a4 574 SMART SM00382 314 435 2.3E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS13540 b41823e75d742ee16fab9d0f80fa14a4 574 Pfam PF00437 Type II/IV secretion system protein 190 453 5.9E-74 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VV93_RS13540 b41823e75d742ee16fab9d0f80fa14a4 574 Gene3D G3DSA:3.40.50.300 291 559 1.3E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13540 b41823e75d742ee16fab9d0f80fa14a4 574 SUPERFAMILY SSF160246 3 145 3.92E-39 T 23-04-2016 VV93_RS00365 489c92cee3ef7338651d2acc274ee008 259 Gene3D G3DSA:3.40.1630.10 1 56 4.2E-26 T 23-04-2016 VV93_RS00365 489c92cee3ef7338651d2acc274ee008 259 SUPERFAMILY SSF53335 5 254 3.38E-73 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00365 489c92cee3ef7338651d2acc274ee008 259 PANTHER PTHR36112:SF1 14 259 1.1E-136 T 23-04-2016 VV93_RS00365 489c92cee3ef7338651d2acc274ee008 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 38.377 T 23-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VV93_RS00365 489c92cee3ef7338651d2acc274ee008 259 Pfam PF04445 Putative SAM-dependent methyltransferase 19 254 6.1E-105 T 23-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VV93_RS00365 489c92cee3ef7338651d2acc274ee008 259 Gene3D G3DSA:3.40.50.150 57 255 5.8E-77 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00365 489c92cee3ef7338651d2acc274ee008 259 PANTHER PTHR36112 14 259 1.1E-136 T 23-04-2016 VV93_RS06115 1d6910491cd6b83fdb3a081d487758d8 174 PANTHER PTHR38099 2 174 1.3E-72 T 23-04-2016 VV93_RS06115 1d6910491cd6b83fdb3a081d487758d8 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 1.6E-15 T 23-04-2016 IPR003772 Protein of unknown function DUF177 VV93_RS03970 fc022c6a3edbf9ccd618b0456ac1a1b2 294 Gene3D G3DSA:1.10.10.10 7 90 2.3E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS03970 fc022c6a3edbf9ccd618b0456ac1a1b2 294 Gene3D G3DSA:3.40.190.10 94 178 3.5E-22 T 23-04-2016 VV93_RS03970 fc022c6a3edbf9ccd618b0456ac1a1b2 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 65 1.2E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS03970 fc022c6a3edbf9ccd618b0456ac1a1b2 294 PANTHER PTHR30537 1 291 3.7E-140 T 23-04-2016 VV93_RS03970 fc022c6a3edbf9ccd618b0456ac1a1b2 294 SUPERFAMILY SSF46785 6 90 7.72E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS03970 fc022c6a3edbf9ccd618b0456ac1a1b2 294 Pfam PF03466 LysR substrate binding domain 90 290 1.1E-44 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS03970 fc022c6a3edbf9ccd618b0456ac1a1b2 294 SUPERFAMILY SSF53850 91 291 2.17E-46 T 23-04-2016 VV93_RS03970 fc022c6a3edbf9ccd618b0456ac1a1b2 294 PANTHER PTHR30537:SF10 1 291 3.7E-140 T 23-04-2016 VV93_RS03970 fc022c6a3edbf9ccd618b0456ac1a1b2 294 Gene3D G3DSA:3.40.190.10 179 255 7.0E-22 T 23-04-2016 VV93_RS11790 9c0b01d35eddd095aaa003f6766b3ffc 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 9.1E-227 T 23-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VV93_RS11790 9c0b01d35eddd095aaa003f6766b3ffc 505 SUPERFAMILY SSF53067 255 497 6.29E-85 T 23-04-2016 VV93_RS11790 9c0b01d35eddd095aaa003f6766b3ffc 505 SUPERFAMILY SSF53067 5 256 3.99E-92 T 23-04-2016 VV93_RS11790 9c0b01d35eddd095aaa003f6766b3ffc 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 4.9E-60 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VV93_RS11790 9c0b01d35eddd095aaa003f6766b3ffc 505 PANTHER PTHR10196:SF9 1 505 4.9E-260 T 23-04-2016 VV93_RS11790 9c0b01d35eddd095aaa003f6766b3ffc 505 PIRSF PIRSF000538 4 502 4.9E-175 T 23-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VV93_RS11790 9c0b01d35eddd095aaa003f6766b3ffc 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VV93_RS11790 9c0b01d35eddd095aaa003f6766b3ffc 505 Gene3D G3DSA:3.30.420.40 255 498 9.2E-102 T 23-04-2016 VV93_RS11790 9c0b01d35eddd095aaa003f6766b3ffc 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 5.6E-85 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VV93_RS11790 9c0b01d35eddd095aaa003f6766b3ffc 505 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 57.985 T 23-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VV93_RS11790 9c0b01d35eddd095aaa003f6766b3ffc 505 Gene3D G3DSA:3.30.420.40 2 254 4.5E-103 T 23-04-2016 VV93_RS11790 9c0b01d35eddd095aaa003f6766b3ffc 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VV93_RS11790 9c0b01d35eddd095aaa003f6766b3ffc 505 PANTHER PTHR10196 1 505 4.9E-260 T 23-04-2016 VV93_RS11090 c5dd4aa84bcac1a6c9925d8d63cc0fed 377 PANTHER PTHR30244:SF1 2 376 4.2E-155 T 23-04-2016 VV93_RS11090 c5dd4aa84bcac1a6c9925d8d63cc0fed 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 376 4.8E-24 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS11090 c5dd4aa84bcac1a6c9925d8d63cc0fed 377 PRINTS PR00207 Flagellin signature 37 54 3.0E-27 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV93_RS11090 c5dd4aa84bcac1a6c9925d8d63cc0fed 377 PRINTS PR00207 Flagellin signature 76 95 3.0E-27 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV93_RS11090 c5dd4aa84bcac1a6c9925d8d63cc0fed 377 PRINTS PR00207 Flagellin signature 111 134 3.0E-27 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV93_RS11090 c5dd4aa84bcac1a6c9925d8d63cc0fed 377 Gene3D G3DSA:1.20.1330.10 279 332 6.7E-61 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS11090 c5dd4aa84bcac1a6c9925d8d63cc0fed 377 Gene3D G3DSA:1.20.1330.10 54 171 6.7E-61 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS11090 c5dd4aa84bcac1a6c9925d8d63cc0fed 377 PANTHER PTHR30244 2 376 4.2E-155 T 23-04-2016 VV93_RS11090 c5dd4aa84bcac1a6c9925d8d63cc0fed 377 SUPERFAMILY SSF64518 5 376 2.48E-94 T 23-04-2016 VV93_RS11090 c5dd4aa84bcac1a6c9925d8d63cc0fed 377 Pfam PF07196 Flagellin hook IN motif 204 246 3.2E-11 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VV93_RS11090 c5dd4aa84bcac1a6c9925d8d63cc0fed 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.1E-43 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS03875 84f7adba317a3b1539cbae71643c5975 294 Pfam PF01513 ATP-NAD kinase 8 273 1.1E-68 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VV93_RS03875 84f7adba317a3b1539cbae71643c5975 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.784 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VV93_RS03875 84f7adba317a3b1539cbae71643c5975 294 Gene3D G3DSA:2.60.200.30 152 262 1.6E-41 T 23-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VV93_RS03875 84f7adba317a3b1539cbae71643c5975 294 PANTHER PTHR20275 2 290 1.1E-111 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VV93_RS03875 84f7adba317a3b1539cbae71643c5975 294 SUPERFAMILY SSF111331 8 290 1.22E-91 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain VV93_RS03875 84f7adba317a3b1539cbae71643c5975 294 Gene3D G3DSA:3.40.50.10330 3 151 8.7E-39 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VV93_RS00050 e54b52217855bf0942705c1e3b3cdebf 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 302 1.1E-170 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV93_RS00050 e54b52217855bf0942705c1e3b3cdebf 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 2.7E-70 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV93_RS00050 e54b52217855bf0942705c1e3b3cdebf 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 2.7E-70 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV93_RS00050 e54b52217855bf0942705c1e3b3cdebf 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 2.7E-70 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV93_RS00050 e54b52217855bf0942705c1e3b3cdebf 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.7E-70 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV93_RS00050 e54b52217855bf0942705c1e3b3cdebf 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 2.7E-70 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV93_RS00050 e54b52217855bf0942705c1e3b3cdebf 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 2.7E-70 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV93_RS00050 e54b52217855bf0942705c1e3b3cdebf 305 SUPERFAMILY SSF55681 8 293 1.88E-132 T 23-04-2016 VV93_RS00050 e54b52217855bf0942705c1e3b3cdebf 305 PANTHER PTHR30075 1 303 8.1E-274 T 23-04-2016 VV93_RS00050 e54b52217855bf0942705c1e3b3cdebf 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 5.1E-149 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV93_RS00050 e54b52217855bf0942705c1e3b3cdebf 305 Gene3D G3DSA:1.20.58.180 216 299 3.2E-37 T 23-04-2016 VV93_RS00050 e54b52217855bf0942705c1e3b3cdebf 305 Gene3D G3DSA:3.30.930.10 4 215 2.8E-104 T 23-04-2016 VV93_RS00050 e54b52217855bf0942705c1e3b3cdebf 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.709 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV93_RS00495 0f1a197e72f00790d77e9f32a6ce6592 407 SMART SM00052 2 199 3.7E-4 T 23-04-2016 IPR001633 EAL domain VV93_RS00495 0f1a197e72f00790d77e9f32a6ce6592 407 Gene3D G3DSA:1.10.3150.10 186 354 4.0E-31 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD VV93_RS00495 0f1a197e72f00790d77e9f32a6ce6592 407 Pfam PF08668 HDOD domain 207 324 1.0E-13 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD VV93_RS00495 0f1a197e72f00790d77e9f32a6ce6592 407 Pfam PF00563 EAL domain 76 194 4.9E-12 T 23-04-2016 IPR001633 EAL domain VV93_RS00495 0f1a197e72f00790d77e9f32a6ce6592 407 SUPERFAMILY SSF109604 185 404 1.1E-41 T 23-04-2016 VV93_RS00495 0f1a197e72f00790d77e9f32a6ce6592 407 SUPERFAMILY SSF141868 4 198 4.71E-28 T 23-04-2016 IPR001633 EAL domain VV93_RS00495 0f1a197e72f00790d77e9f32a6ce6592 407 PIRSF PIRSF003180 1 407 5.9E-171 T 23-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VV93_RS00495 0f1a197e72f00790d77e9f32a6ce6592 407 PANTHER PTHR33525:SF4 3 407 1.6E-141 T 23-04-2016 VV93_RS00495 0f1a197e72f00790d77e9f32a6ce6592 407 PANTHER PTHR33525 3 407 1.6E-141 T 23-04-2016 VV93_RS00495 0f1a197e72f00790d77e9f32a6ce6592 407 Gene3D G3DSA:3.20.20.450 81 185 2.3E-12 T 23-04-2016 IPR001633 EAL domain VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 Gene3D G3DSA:1.10.287.130 231 300 2.1E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 Gene3D G3DSA:3.30.565.10 308 469 8.8E-44 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 Pfam PF00672 HAMP domain 155 220 7.5E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 SUPERFAMILY SSF55874 293 462 8.38E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 Gene3D G3DSA:3.40.50.2300 488 614 3.4E-41 T 23-04-2016 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 SMART SM00448 490 605 2.7E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 SMART SM00304 172 224 2.4E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 Gene3D G3DSA:1.20.120.160 638 750 2.1E-21 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 463 6.5E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 SUPERFAMILY SSF47384 223 304 3.34E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 SMART SM00388 239 304 8.2E-22 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 SMART SM00387 351 466 3.6E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 SUPERFAMILY SSF52172 487 610 7.83E-37 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 303 6.1E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 PANTHER PTHR24423:SF491 218 649 1.4E-151 T 23-04-2016 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 PANTHER PTHR24423:SF491 2 7 1.4E-151 T 23-04-2016 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 Pfam PF01627 Hpt domain 665 747 1.8E-8 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 PANTHER PTHR24423 218 649 1.4E-151 T 23-04-2016 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 PANTHER PTHR24423 2 7 1.4E-151 T 23-04-2016 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 SUPERFAMILY SSF47226 640 753 2.36E-19 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 SUPERFAMILY SSF158472 175 221 1.12E-5 T 23-04-2016 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 Pfam PF00072 Response regulator receiver domain 492 605 2.4E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 6.9E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 444 6.9E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 6.9E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS07680 5cce0abc85250be8e7920d01f3539930 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 463 6.9E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS13600 4b681d96943e8c39890817fa8f4503c5 587 Pfam PF04932 O-Antigen ligase 221 366 7.0E-15 T 23-04-2016 IPR007016 O-antigen ligase-related VV93_RS13600 4b681d96943e8c39890817fa8f4503c5 587 Pfam PF15864 Protein glycosylation ligase 174 199 3.0E-11 T 23-04-2016 IPR031726 Protein glycosylation ligase domain VV93_RS13600 4b681d96943e8c39890817fa8f4503c5 587 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 387 576 7.4E-64 T 23-04-2016 IPR021797 Virulence factor membrane-bound polymerase, C-terminal VV93_RS05165 c8750dff720b3cb7733a6fcae7a83b53 356 PIRSF PIRSF005739 3 345 5.0E-11 T 23-04-2016 IPR016461 O-methyltransferase COMT-type GO:0008168 VV93_RS05165 c8750dff720b3cb7733a6fcae7a83b53 356 Pfam PF00891 O-methyltransferase 169 338 3.0E-14 T 23-04-2016 IPR001077 O-methyltransferase, family 2 GO:0008171 VV93_RS05165 c8750dff720b3cb7733a6fcae7a83b53 356 Gene3D G3DSA:3.40.50.150 99 341 1.5E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS05165 c8750dff720b3cb7733a6fcae7a83b53 356 Gene3D G3DSA:1.10.10.10 13 62 2.1E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS05165 c8750dff720b3cb7733a6fcae7a83b53 356 SUPERFAMILY SSF53335 99 341 1.09E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS05165 c8750dff720b3cb7733a6fcae7a83b53 356 SUPERFAMILY SSF46785 19 99 2.18E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS05165 c8750dff720b3cb7733a6fcae7a83b53 356 PANTHER PTHR11746 1 287 1.6E-21 T 23-04-2016 VV93_RS20090 660d4f221f8366d8da829c01a89771b4 216 PANTHER PTHR33376:SF7 1 216 4.4E-112 T 23-04-2016 VV93_RS20090 660d4f221f8366d8da829c01a89771b4 216 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 1 204 1.2E-67 T 23-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 VV93_RS20090 660d4f221f8366d8da829c01a89771b4 216 PANTHER PTHR33376 1 216 4.4E-112 T 23-04-2016 VV93_RS20090 660d4f221f8366d8da829c01a89771b4 216 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 1 215 7.6E-80 T 23-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 VV93_RS13370 97deffc5f6561ab61a55d4d9d0d4bf98 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 3.4E-31 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VV93_RS13370 97deffc5f6561ab61a55d4d9d0d4bf98 149 SUPERFAMILY SSF102400 1 146 3.27E-42 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VV93_RS13370 97deffc5f6561ab61a55d4d9d0d4bf98 149 PANTHER PTHR38767 2 149 3.7E-53 T 23-04-2016 VV93_RS13370 97deffc5f6561ab61a55d4d9d0d4bf98 149 Gene3D G3DSA:3.40.50.10110 1 146 7.5E-43 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VV93_RS12570 1c858ad7ba10571622e3a24e9f991677 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 7.1E-30 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VV93_RS12570 1c858ad7ba10571622e3a24e9f991677 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 7.1E-30 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VV93_RS12570 1c858ad7ba10571622e3a24e9f991677 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 7.1E-30 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VV93_RS12570 1c858ad7ba10571622e3a24e9f991677 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 7.1E-30 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VV93_RS12570 1c858ad7ba10571622e3a24e9f991677 289 PANTHER PTHR30487:SF0 1 35 1.8E-110 T 23-04-2016 VV93_RS12570 1c858ad7ba10571622e3a24e9f991677 289 PANTHER PTHR30487:SF0 57 285 1.8E-110 T 23-04-2016 VV93_RS12570 1c858ad7ba10571622e3a24e9f991677 289 PANTHER PTHR30487 1 35 1.8E-110 T 23-04-2016 VV93_RS12570 1c858ad7ba10571622e3a24e9f991677 289 PANTHER PTHR30487 57 285 1.8E-110 T 23-04-2016 VV93_RS12570 1c858ad7ba10571622e3a24e9f991677 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 5.7E-34 T 23-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VV93_RS12570 1c858ad7ba10571622e3a24e9f991677 289 Pfam PF01478 Type IV leader peptidase family 137 244 4.7E-27 T 23-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VV93_RS07365 01057e7d5b96474231190c511ab3b0ad 626 Pfam PF00501 AMP-binding enzyme 66 501 7.9E-79 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VV93_RS07365 01057e7d5b96474231190c511ab3b0ad 626 PANTHER PTHR24095 1 623 0.0 T 23-04-2016 VV93_RS07365 01057e7d5b96474231190c511ab3b0ad 626 SUPERFAMILY SSF56801 3 619 2.22E-152 T 23-04-2016 VV93_RS07365 01057e7d5b96474231190c511ab3b0ad 626 Gene3D G3DSA:3.40.50.980 243 399 3.0E-27 T 23-04-2016 VV93_RS07365 01057e7d5b96474231190c511ab3b0ad 626 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 1.2E-26 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VV93_RS07365 01057e7d5b96474231190c511ab3b0ad 626 PANTHER PTHR24095:SF160 1 623 0.0 T 23-04-2016 VV93_RS07365 01057e7d5b96474231190c511ab3b0ad 626 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 23-04-2016 IPR020845 AMP-binding, conserved site VV93_RS07365 01057e7d5b96474231190c511ab3b0ad 626 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 5.2E-11 T 23-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 VV93_RS07365 01057e7d5b96474231190c511ab3b0ad 626 Gene3D G3DSA:3.40.50.980 67 242 1.2E-35 T 23-04-2016 VV93_RS07365 01057e7d5b96474231190c511ab3b0ad 626 Gene3D G3DSA:2.30.38.10 418 495 3.3E-6 T 23-04-2016 VV93_RS07365 01057e7d5b96474231190c511ab3b0ad 626 Gene3D G3DSA:3.30.300.30 498 602 1.8E-24 T 23-04-2016 VV93_RS04135 a773a41339ffd36837eb5aa7fc62af6c 247 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 98 106 - T 23-04-2016 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 VV93_RS04135 a773a41339ffd36837eb5aa7fc62af6c 247 SMART SM00477 39 230 1.3E-63 T 23-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 VV93_RS04135 a773a41339ffd36837eb5aa7fc62af6c 247 SUPERFAMILY SSF54060 21 239 8.83E-71 T 23-04-2016 VV93_RS04135 a773a41339ffd36837eb5aa7fc62af6c 247 PANTHER PTHR13966 34 240 5.8E-55 T 23-04-2016 VV93_RS04135 a773a41339ffd36837eb5aa7fc62af6c 247 Gene3D G3DSA:3.40.570.10 19 241 6.3E-71 T 23-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 VV93_RS04135 a773a41339ffd36837eb5aa7fc62af6c 247 SMART SM00892 38 230 9.5E-65 T 23-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 VV93_RS04135 a773a41339ffd36837eb5aa7fc62af6c 247 Pfam PF01223 DNA/RNA non-specific endonuclease 22 229 2.4E-57 T 23-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 VV93_RS03705 1d73e13ed2c428bc22a6c8b6d3a021bf 328 Pfam PF01300 Telomere recombination 28 203 1.8E-56 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 VV93_RS03705 1d73e13ed2c428bc22a6c8b6d3a021bf 328 Gene3D G3DSA:3.90.870.10 17 210 3.9E-73 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VV93_RS03705 1d73e13ed2c428bc22a6c8b6d3a021bf 328 PIRSF PIRSF004930 5 328 3.3E-112 T 23-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 VV93_RS03705 1d73e13ed2c428bc22a6c8b6d3a021bf 328 SUPERFAMILY SSF55821 20 215 5.19E-62 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VV93_RS03705 1d73e13ed2c428bc22a6c8b6d3a021bf 328 PANTHER PTHR17490 18 324 7.6E-88 T 23-04-2016 VV93_RS03705 1d73e13ed2c428bc22a6c8b6d3a021bf 328 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 18 211 6.4E-60 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 VV93_RS03705 1d73e13ed2c428bc22a6c8b6d3a021bf 328 PANTHER PTHR17490:SF3 18 324 7.6E-88 T 23-04-2016 VV93_RS03705 1d73e13ed2c428bc22a6c8b6d3a021bf 328 Pfam PF03481 Putative GTP-binding controlling metal-binding 205 325 2.9E-16 T 23-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain VV93_RS10845 48759d9bcf1f8926ead65ac8a37f2770 243 Pfam PF11859 Protein of unknown function (DUF3379) 1 239 2.2E-83 T 23-04-2016 IPR021806 Protein of unknown function DUF3379 VV93_RS01750 b8e6b4d6a5b9c24759f23c6ec635b40c 140 Pfam PF01575 MaoC like domain 20 128 9.7E-24 T 23-04-2016 IPR002539 MaoC-like domain VV93_RS01750 b8e6b4d6a5b9c24759f23c6ec635b40c 140 PANTHER PTHR13078 4 140 1.6E-42 T 23-04-2016 VV93_RS01750 b8e6b4d6a5b9c24759f23c6ec635b40c 140 SUPERFAMILY SSF54637 7 140 3.37E-38 T 23-04-2016 IPR029069 HotDog domain VV93_RS01750 b8e6b4d6a5b9c24759f23c6ec635b40c 140 Gene3D G3DSA:3.10.129.10 10 139 1.8E-42 T 23-04-2016 IPR029069 HotDog domain VV93_RS03695 8c50878dcf04bafe9dbb3268ee8fd8a2 637 ProSitePatterns PS01303 BCCT family of transporters signature. 321 330 - T 23-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 VV93_RS03695 8c50878dcf04bafe9dbb3268ee8fd8a2 637 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 50 503 3.5E-145 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VV93_RS03695 8c50878dcf04bafe9dbb3268ee8fd8a2 637 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 13 502 3.5E-157 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VV93_RS03695 8c50878dcf04bafe9dbb3268ee8fd8a2 637 PANTHER PTHR30047 8 508 2.4E-173 T 23-04-2016 VV93_RS03695 8c50878dcf04bafe9dbb3268ee8fd8a2 637 PANTHER PTHR30047:SF5 8 508 2.4E-173 T 23-04-2016 VV93_RS11320 49849193e555181ab37d8eca3091c35c 815 Gene3D G3DSA:1.10.540.10 96 235 8.3E-31 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VV93_RS11320 49849193e555181ab37d8eca3091c35c 815 Gene3D G3DSA:2.40.110.10 238 349 1.3E-15 T 23-04-2016 VV93_RS11320 49849193e555181ab37d8eca3091c35c 815 PANTHER PTHR10909:SF321 50 532 8.2E-295 T 23-04-2016 VV93_RS11320 49849193e555181ab37d8eca3091c35c 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 2.8E-13 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VV93_RS11320 49849193e555181ab37d8eca3091c35c 815 PANTHER PTHR10909 50 532 8.2E-295 T 23-04-2016 VV93_RS11320 49849193e555181ab37d8eca3091c35c 815 SUPERFAMILY SSF56645 122 356 2.62E-42 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 VV93_RS11320 49849193e555181ab37d8eca3091c35c 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 145 234 4.8E-16 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VV93_RS11320 49849193e555181ab37d8eca3091c35c 815 Gene3D G3DSA:1.20.140.10 350 508 2.4E-23 T 23-04-2016 VV93_RS11320 49849193e555181ab37d8eca3091c35c 815 SUPERFAMILY SSF47203 361 508 5.48E-22 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VV93_RS11320 49849193e555181ab37d8eca3091c35c 815 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 7.3E-114 T 23-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 VV93_RS14160 761ce51804aff4498d42118229df1bb0 817 SMART SM00357 90 152 1.9E-15 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 VV93_RS14160 761ce51804aff4498d42118229df1bb0 817 SUPERFAMILY SSF50249 651 739 7.86E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS14160 761ce51804aff4498d42118229df1bb0 817 Pfam PF00575 S1 RNA binding domain 650 731 9.0E-13 T 23-04-2016 IPR003029 S1 domain GO:0003676 VV93_RS14160 761ce51804aff4498d42118229df1bb0 817 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 733 2.4E-274 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VV93_RS14160 761ce51804aff4498d42118229df1bb0 817 SUPERFAMILY SSF50249 227 650 2.97E-143 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS14160 761ce51804aff4498d42118229df1bb0 817 Pfam PF00773 RNB domain 267 594 3.6E-107 T 23-04-2016 VV93_RS14160 761ce51804aff4498d42118229df1bb0 817 SMART SM00316 650 733 6.0E-14 T 23-04-2016 IPR022967 RNA-binding domain, S1 VV93_RS14160 761ce51804aff4498d42118229df1bb0 817 PANTHER PTHR23355:SF9 4 812 0.0 T 23-04-2016 VV93_RS14160 761ce51804aff4498d42118229df1bb0 817 SUPERFAMILY SSF50249 71 153 2.4E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS14160 761ce51804aff4498d42118229df1bb0 817 Gene3D G3DSA:2.40.50.140 652 733 1.4E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS14160 761ce51804aff4498d42118229df1bb0 817 SMART SM00955 267 595 3.5E-184 T 23-04-2016 VV93_RS14160 761ce51804aff4498d42118229df1bb0 817 Pfam PF08461 Ribonuclease R winged-helix domain 27 88 2.7E-12 T 23-04-2016 IPR013668 Ribonuclease R winged-helix domain VV93_RS14160 761ce51804aff4498d42118229df1bb0 817 Pfam PF08206 Ribonuclease B OB domain 91 151 1.4E-21 T 23-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain VV93_RS14160 761ce51804aff4498d42118229df1bb0 817 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 23-04-2016 IPR022966 Ribonuclease II/R, conserved site VV93_RS14160 761ce51804aff4498d42118229df1bb0 817 SUPERFAMILY SSF50249 145 244 3.47E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS14160 761ce51804aff4498d42118229df1bb0 817 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 1.0E-255 T 23-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VV93_RS14160 761ce51804aff4498d42118229df1bb0 817 PANTHER PTHR23355 4 812 0.0 T 23-04-2016 VV93_RS14160 761ce51804aff4498d42118229df1bb0 817 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 58.864 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VV93_RS03595 4513327b545e4f904be7458f522e3930 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 3.3E-58 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV93_RS03595 4513327b545e4f904be7458f522e3930 141 SMART SM00562 3 140 4.5E-91 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV93_RS03595 4513327b545e4f904be7458f522e3930 141 SUPERFAMILY SSF54919 1 140 1.02E-60 T 23-04-2016 VV93_RS03595 4513327b545e4f904be7458f522e3930 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 23-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV93_RS03595 4513327b545e4f904be7458f522e3930 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.7E-38 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV93_RS03595 4513327b545e4f904be7458f522e3930 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.7E-38 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV93_RS03595 4513327b545e4f904be7458f522e3930 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.7E-38 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV93_RS03595 4513327b545e4f904be7458f522e3930 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.7E-38 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV93_RS03595 4513327b545e4f904be7458f522e3930 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.7E-38 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV93_RS03595 4513327b545e4f904be7458f522e3930 141 PANTHER PTHR11349 1 140 2.5E-77 T 23-04-2016 VV93_RS03595 4513327b545e4f904be7458f522e3930 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.783 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV93_RS03595 4513327b545e4f904be7458f522e3930 141 Gene3D G3DSA:3.30.70.141 1 139 2.4E-60 T 23-04-2016 VV93_RS09525 d758d5d4461e08edd63603c3a6b15e4d 222 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 5.0E-59 T 23-04-2016 IPR021367 Protein of unknown function DUF2982 VV93_RS02625 7b67ae4fdd3aa0682a08a54e0107b1cc 718 Gene3D G3DSA:1.10.101.10 459 527 1.8E-12 T 23-04-2016 IPR002477 Peptidoglycan binding-like VV93_RS02625 7b67ae4fdd3aa0682a08a54e0107b1cc 718 Pfam PF16537 Type II secretion system protein B 653 712 6.0E-24 T 23-04-2016 IPR032389 Type II secretion system protein B VV93_RS02625 7b67ae4fdd3aa0682a08a54e0107b1cc 718 PANTHER PTHR35894 2 547 2.4E-160 T 23-04-2016 VV93_RS02625 7b67ae4fdd3aa0682a08a54e0107b1cc 718 SMART SM00382 42 195 2.7E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS02625 7b67ae4fdd3aa0682a08a54e0107b1cc 718 Gene3D G3DSA:3.40.50.300 27 184 2.5E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02625 7b67ae4fdd3aa0682a08a54e0107b1cc 718 PANTHER PTHR35894:SF2 2 547 2.4E-160 T 23-04-2016 VV93_RS02625 7b67ae4fdd3aa0682a08a54e0107b1cc 718 Pfam PF13401 AAA domain 42 171 1.2E-23 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS02625 7b67ae4fdd3aa0682a08a54e0107b1cc 718 SUPERFAMILY SSF47090 456 530 1.6E-12 T 23-04-2016 IPR002477 Peptidoglycan binding-like VV93_RS02625 7b67ae4fdd3aa0682a08a54e0107b1cc 718 Pfam PF01471 Putative peptidoglycan binding domain 470 525 1.4E-6 T 23-04-2016 IPR002477 Peptidoglycan binding-like VV93_RS02625 7b67ae4fdd3aa0682a08a54e0107b1cc 718 SUPERFAMILY SSF52540 5 264 7.61E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09405 27a9e88eff792749a0374cb2a061df6c 120 PANTHER PTHR12589 1 120 8.9E-53 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VV93_RS09405 27a9e88eff792749a0374cb2a061df6c 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 6.4E-33 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VV93_RS09405 27a9e88eff792749a0374cb2a061df6c 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 1.7E-35 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VV93_RS09405 27a9e88eff792749a0374cb2a061df6c 120 PIRSF PIRSF006113 1 120 2.4E-53 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VV93_RS09405 27a9e88eff792749a0374cb2a061df6c 120 Gene3D G3DSA:3.30.479.10 1 120 3.2E-41 T 23-04-2016 VV93_RS09405 27a9e88eff792749a0374cb2a061df6c 120 SUPERFAMILY SSF55620 2 118 5.56E-41 T 23-04-2016 VV93_RS00010 738bd0703c240eb1dbc30eff50fc8240 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 5.7E-38 T 23-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00010 738bd0703c240eb1dbc30eff50fc8240 366 Gene3D G3DSA:3.10.150.10 1 121 5.3E-33 T 23-04-2016 VV93_RS00010 738bd0703c240eb1dbc30eff50fc8240 366 SUPERFAMILY SSF55979 126 244 3.23E-28 T 23-04-2016 VV93_RS00010 738bd0703c240eb1dbc30eff50fc8240 366 PANTHER PTHR30478 2 366 1.1E-146 T 23-04-2016 VV93_RS00010 738bd0703c240eb1dbc30eff50fc8240 366 SMART SM00480 17 362 3.6E-146 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00010 738bd0703c240eb1dbc30eff50fc8240 366 PIRSF PIRSF000804 1 366 1.2E-117 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00010 738bd0703c240eb1dbc30eff50fc8240 366 SUPERFAMILY SSF55979 245 366 7.85E-36 T 23-04-2016 VV93_RS00010 738bd0703c240eb1dbc30eff50fc8240 366 Gene3D G3DSA:3.10.150.10 249 366 3.0E-38 T 23-04-2016 VV93_RS00010 738bd0703c240eb1dbc30eff50fc8240 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 5.8E-35 T 23-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00010 738bd0703c240eb1dbc30eff50fc8240 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 2.4E-108 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00010 738bd0703c240eb1dbc30eff50fc8240 366 SUPERFAMILY SSF55979 1 118 1.48E-29 T 23-04-2016 VV93_RS00010 738bd0703c240eb1dbc30eff50fc8240 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.6E-38 T 23-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS00010 738bd0703c240eb1dbc30eff50fc8240 366 Gene3D G3DSA:3.10.150.10 122 248 6.1E-38 T 23-04-2016 VV93_RS02215 5436453ded6aa066f8a741457f7ce949 241 Gene3D G3DSA:3.40.1130.10 44 215 1.0E-17 T 23-04-2016 VV93_RS02215 5436453ded6aa066f8a741457f7ce949 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 3.2E-43 T 23-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 VV93_RS02215 5436453ded6aa066f8a741457f7ce949 241 PANTHER PTHR10434:SF20 1 239 8.4E-153 T 23-04-2016 VV93_RS02215 5436453ded6aa066f8a741457f7ce949 241 SUPERFAMILY SSF69593 5 235 3.66E-56 T 23-04-2016 VV93_RS02215 5436453ded6aa066f8a741457f7ce949 241 SMART SM00563 67 182 3.7E-39 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VV93_RS02215 5436453ded6aa066f8a741457f7ce949 241 PANTHER PTHR10434 1 239 8.4E-153 T 23-04-2016 VV93_RS02215 5436453ded6aa066f8a741457f7ce949 241 Pfam PF01553 Acyltransferase 58 180 2.4E-31 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VV93_RS07330 30716be821a368a95f6de924b70da162 323 PIRSF PIRSF017082 2 323 2.7E-85 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 VV93_RS07330 30716be821a368a95f6de924b70da162 323 PANTHER PTHR30349:SF25 1 283 6.6E-108 T 23-04-2016 VV93_RS07330 30716be821a368a95f6de924b70da162 323 SUPERFAMILY SSF53850 111 289 1.71E-8 T 23-04-2016 VV93_RS07330 30716be821a368a95f6de924b70da162 323 PANTHER PTHR30349 1 283 6.6E-108 T 23-04-2016 VV93_RS07330 30716be821a368a95f6de924b70da162 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 66 320 9.6E-26 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 Gene3D G3DSA:3.40.50.2300 521 645 3.8E-28 T 23-04-2016 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 SUPERFAMILY SSF52172 527 642 3.98E-25 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 Gene3D G3DSA:3.30.565.10 349 513 2.6E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 SUPERFAMILY SSF47226 666 779 6.93E-28 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 Gene3D G3DSA:1.20.120.160 681 779 1.7E-30 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 SUPERFAMILY SSF55785 140 267 2.44E-25 T 23-04-2016 IPR000014 PAS domain VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 SMART SM00073 680 777 5.0E-8 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 4.0E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 4.0E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 4.0E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 4.0E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 4.5E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 Gene3D G3DSA:3.30.450.20 142 267 8.3E-24 T 23-04-2016 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 SMART SM00448 527 638 5.6E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 SUPERFAMILY SSF55874 336 507 1.44E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 PIRSF PIRSF003182 1 780 0.0 T 23-04-2016 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 Pfam PF01627 Hpt domain 691 764 1.5E-11 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 Gene3D G3DSA:1.10.287.970 1 89 9.8E-40 T 23-04-2016 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 SMART SM00388 282 347 1.9E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 Pfam PF00072 Response regulator receiver domain 529 638 1.1E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 Pfam PF08448 PAS fold 162 271 4.5E-18 T 23-04-2016 IPR013656 PAS fold-4 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 SMART SM00387 394 510 1.2E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 506 1.2E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 PANTHER PTHR24423 153 682 0.0 T 23-04-2016 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 PANTHER PTHR24423 20 95 0.0 T 23-04-2016 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 Gene3D G3DSA:1.10.287.130 274 343 2.0E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 2.2E-18 T 23-04-2016 IPR000014 PAS domain VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 SMART SM00091 155 221 2.5E-7 T 23-04-2016 IPR000014 PAS domain VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 PANTHER PTHR24423:SF476 153 682 0.0 T 23-04-2016 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 PANTHER PTHR24423:SF476 20 95 0.0 T 23-04-2016 VV93_RS02955 19b44a1704536199e3183ae7b2576f2e 780 SUPERFAMILY SSF47384 270 347 8.83E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 1.5E-99 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 Hamap MF_01973 Lon protease [lon]. 11 771 72.185 T 23-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 PANTHER PTHR10046 8 775 0.0 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 SMART SM00464 10 201 4.9E-76 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 PIRSF PIRSF001174 1 774 0.0 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 SUPERFAMILY SSF52540 312 586 1.27E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 Gene3D G3DSA:3.40.50.300 309 498 6.2E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 2.3E-41 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 Gene3D G3DSA:1.10.8.60 499 583 8.2E-33 T 23-04-2016 VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 SMART SM00382 347 491 1.2E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 SUPERFAMILY SSF54211 594 769 1.82E-59 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 SUPERFAMILY SSF88697 10 200 2.49E-48 T 23-04-2016 IPR015947 PUA-like domain VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 675 683 - T 23-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 6.0E-56 T 23-04-2016 VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 6.0E-56 T 23-04-2016 VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 6.0E-56 T 23-04-2016 VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 6.0E-56 T 23-04-2016 VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 6.0E-56 T 23-04-2016 VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 Gene3D G3DSA:3.30.230.10 589 770 7.0E-78 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 5.2E-17 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VV93_RS05265 d6f79399b224b6a710a0261a4a1ce652 783 PANTHER PTHR10046:SF43 8 775 0.0 T 23-04-2016 VV93_RS10770 1935ef4619bd21e44fc152752ce0f6d2 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 6.3E-61 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS10770 1935ef4619bd21e44fc152752ce0f6d2 337 PANTHER PTHR10174 48 336 8.7E-88 T 23-04-2016 VV93_RS10770 1935ef4619bd21e44fc152752ce0f6d2 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 2.5E-127 T 23-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS10770 1935ef4619bd21e44fc152752ce0f6d2 337 PIRSF PIRSF000148 4 337 1.0E-131 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS10770 1935ef4619bd21e44fc152752ce0f6d2 337 SUPERFAMILY SSF55347 131 320 3.27E-77 T 23-04-2016 VV93_RS10770 1935ef4619bd21e44fc152752ce0f6d2 337 SMART SM00859 6 121 1.5E-41 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VV93_RS10770 1935ef4619bd21e44fc152752ce0f6d2 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 23-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS10770 1935ef4619bd21e44fc152752ce0f6d2 337 SUPERFAMILY SSF51735 5 159 5.15E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS10770 1935ef4619bd21e44fc152752ce0f6d2 337 Gene3D G3DSA:3.40.50.720 1 143 1.9E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS10770 1935ef4619bd21e44fc152752ce0f6d2 337 PANTHER PTHR10174:SF2 48 336 8.7E-88 T 23-04-2016 VV93_RS10770 1935ef4619bd21e44fc152752ce0f6d2 337 Gene3D G3DSA:3.30.360.10 144 315 1.5E-79 T 23-04-2016 VV93_RS10770 1935ef4619bd21e44fc152752ce0f6d2 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.373 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS10770 1935ef4619bd21e44fc152752ce0f6d2 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 3.0E-31 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VV93_RS04070 af56929e8f868c7031a22642affb9a2e 155 PANTHER PTHR11078 5 154 6.6E-46 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 VV93_RS04070 af56929e8f868c7031a22642affb9a2e 155 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 8 153 22.894 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 VV93_RS04070 af56929e8f868c7031a22642affb9a2e 155 SUPERFAMILY SSF48013 7 153 1.7E-38 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VV93_RS04070 af56929e8f868c7031a22642affb9a2e 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 1.3E-42 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 VV93_RS04070 af56929e8f868c7031a22642affb9a2e 155 Gene3D G3DSA:1.10.940.10 6 154 1.9E-42 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VV93_RS04070 af56929e8f868c7031a22642affb9a2e 155 Pfam PF01029 NusB family 11 149 2.5E-35 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VV93_RS04225 5c6eeb798b070d98c1e85cc2381de204 321 SUPERFAMILY SSF102114 52 314 1.31E-67 T 23-04-2016 VV93_RS04225 5c6eeb798b070d98c1e85cc2381de204 321 PIRSF PIRSF005963 1 320 1.2E-129 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VV93_RS04225 5c6eeb798b070d98c1e85cc2381de204 321 SMART SM00729 84 293 3.9E-19 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VV93_RS04225 5c6eeb798b070d98c1e85cc2381de204 321 PANTHER PTHR10949 4 312 4.4E-177 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VV93_RS04225 5c6eeb798b070d98c1e85cc2381de204 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 1.6E-8 T 23-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VV93_RS04225 5c6eeb798b070d98c1e85cc2381de204 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.403 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VV93_RS04225 5c6eeb798b070d98c1e85cc2381de204 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 2.4E-149 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VV93_RS04225 5c6eeb798b070d98c1e85cc2381de204 321 Pfam PF04055 Radical SAM superfamily 91 252 1.2E-18 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VV93_RS04225 5c6eeb798b070d98c1e85cc2381de204 321 Gene3D G3DSA:3.20.20.70 53 313 3.4E-72 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS07305 3532cf9c75f77664f69e078df99c9366 219 SUPERFAMILY SSF49354 34 141 1.52E-10 T 23-04-2016 IPR008962 PapD-like VV93_RS07305 3532cf9c75f77664f69e078df99c9366 219 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 41 142 8.6E-7 T 23-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 VV93_RS07305 3532cf9c75f77664f69e078df99c9366 219 Gene3D G3DSA:2.60.40.360 66 141 1.3E-5 T 23-04-2016 IPR008962 PapD-like VV93_RS15380 30d9c044388737eeb71533187a9b1dd8 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 9.4E-25 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VV93_RS15380 30d9c044388737eeb71533187a9b1dd8 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 1.9E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS15380 30d9c044388737eeb71533187a9b1dd8 223 SUPERFAMILY SSF161098 13 203 2.88E-43 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS15380 30d9c044388737eeb71533187a9b1dd8 223 PANTHER PTHR30614:SF16 1 223 2.2E-138 T 23-04-2016 VV93_RS15380 30d9c044388737eeb71533187a9b1dd8 223 PANTHER PTHR30614 1 223 2.2E-138 T 23-04-2016 VV93_RS15380 30d9c044388737eeb71533187a9b1dd8 223 Gene3D G3DSA:1.10.3720.10 14 219 7.1E-45 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS11130 4049250dc1c0d130ce4e1e6cfe1e1482 233 SUPERFAMILY SSF55166 19 176 2.12E-18 T 23-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VV93_RS11130 4049250dc1c0d130ce4e1e6cfe1e1482 233 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 27 179 1.1E-34 T 23-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 VV93_RS11130 4049250dc1c0d130ce4e1e6cfe1e1482 233 PANTHER PTHR34385 89 221 1.2E-44 T 23-04-2016 VV93_RS11130 4049250dc1c0d130ce4e1e6cfe1e1482 233 PANTHER PTHR34385 1 70 1.2E-44 T 23-04-2016 VV93_RS11130 4049250dc1c0d130ce4e1e6cfe1e1482 233 PANTHER PTHR34385:SF1 89 221 1.2E-44 T 23-04-2016 VV93_RS11130 4049250dc1c0d130ce4e1e6cfe1e1482 233 PANTHER PTHR34385:SF1 1 70 1.2E-44 T 23-04-2016 VV93_RS05575 d6133fee78bb8217444ef82614d60678 606 SUPERFAMILY SSF53649 256 586 4.22E-51 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VV93_RS05575 d6133fee78bb8217444ef82614d60678 606 Pfam PF00884 Sulfatase 273 519 4.5E-24 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VV93_RS05575 d6133fee78bb8217444ef82614d60678 606 Gene3D G3DSA:3.40.720.10 259 538 1.1E-33 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VV93_RS05575 d6133fee78bb8217444ef82614d60678 606 PANTHER PTHR10342 576 584 1.9E-91 T 23-04-2016 VV93_RS05575 d6133fee78bb8217444ef82614d60678 606 PANTHER PTHR10342 230 554 1.9E-91 T 23-04-2016 VV93_RS05575 d6133fee78bb8217444ef82614d60678 606 PANTHER PTHR10342:SF215 576 584 1.9E-91 T 23-04-2016 VV93_RS05575 d6133fee78bb8217444ef82614d60678 606 PANTHER PTHR10342:SF215 230 554 1.9E-91 T 23-04-2016 VV93_RS05575 d6133fee78bb8217444ef82614d60678 606 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 5.3E-99 T 23-04-2016 IPR024588 Inner membrane protein YejM, N-terminal VV93_RS05575 d6133fee78bb8217444ef82614d60678 606 PIRSF PIRSF004950 6 604 7.1E-251 T 23-04-2016 IPR012159 Inner membrane protein YejM VV93_RS12020 a7fc6833ef6bf63908df63bdcb2be3be 561 SUPERFAMILY SSF56801 14 547 7.06E-109 T 23-04-2016 VV93_RS12020 a7fc6833ef6bf63908df63bdcb2be3be 561 Gene3D G3DSA:3.40.50.980 17 188 4.2E-28 T 23-04-2016 VV93_RS12020 a7fc6833ef6bf63908df63bdcb2be3be 561 Pfam PF00501 AMP-binding enzyme 24 440 1.4E-84 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VV93_RS12020 a7fc6833ef6bf63908df63bdcb2be3be 561 PANTHER PTHR24096:SF249 16 557 2.0E-249 T 23-04-2016 VV93_RS12020 a7fc6833ef6bf63908df63bdcb2be3be 561 PANTHER PTHR24096 16 557 2.0E-249 T 23-04-2016 VV93_RS12020 a7fc6833ef6bf63908df63bdcb2be3be 561 Gene3D G3DSA:3.40.50.980 189 368 1.8E-25 T 23-04-2016 VV93_RS12020 a7fc6833ef6bf63908df63bdcb2be3be 561 Gene3D G3DSA:2.30.38.10 379 434 3.6E-18 T 23-04-2016 VV93_RS12020 a7fc6833ef6bf63908df63bdcb2be3be 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 23-04-2016 IPR020845 AMP-binding, conserved site VV93_RS04780 d9c1ade862632a7d27523bff8bc598cb 168 Gene3D G3DSA:3.30.70.940 1 99 4.1E-22 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 VV93_RS04780 d9c1ade862632a7d27523bff8bc598cb 168 Pfam PF02357 Transcription termination factor nusG 2 94 1.2E-21 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 VV93_RS04780 d9c1ade862632a7d27523bff8bc598cb 168 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 165 3.1E-62 T 23-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 VV93_RS04780 d9c1ade862632a7d27523bff8bc598cb 168 PANTHER PTHR30265 1 165 1.6E-45 T 23-04-2016 VV93_RS04780 d9c1ade862632a7d27523bff8bc598cb 168 PANTHER PTHR30265:SF3 1 165 1.6E-45 T 23-04-2016 VV93_RS04780 d9c1ade862632a7d27523bff8bc598cb 168 SUPERFAMILY SSF50104 116 165 2.51E-5 T 23-04-2016 IPR008991 Translation protein SH3-like domain VV93_RS04780 d9c1ade862632a7d27523bff8bc598cb 168 Gene3D G3DSA:2.30.30.30 116 165 2.2E-5 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 VV93_RS04780 d9c1ade862632a7d27523bff8bc598cb 168 SUPERFAMILY SSF82679 1 104 7.06E-30 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 VV93_RS04780 d9c1ade862632a7d27523bff8bc598cb 168 SMART SM00738 1 101 3.3E-29 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 VV93_RS04780 d9c1ade862632a7d27523bff8bc598cb 168 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 167 46.13 T 23-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 VV93_RS15140 728de29c2030514ff833d43ee4246f6b 548 Gene3D G3DSA:3.40.50.1220 180 341 1.7E-53 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VV93_RS15140 728de29c2030514ff833d43ee4246f6b 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 23-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VV93_RS15140 728de29c2030514ff833d43ee4246f6b 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 1.8E-48 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VV93_RS15140 728de29c2030514ff833d43ee4246f6b 548 Gene3D G3DSA:3.40.50.970 345 546 1.4E-73 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS15140 728de29c2030514ff833d43ee4246f6b 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 9.6E-56 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VV93_RS15140 728de29c2030514ff833d43ee4246f6b 548 SUPERFAMILY SSF52518 358 545 4.11E-66 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS15140 728de29c2030514ff833d43ee4246f6b 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 322 8.3E-40 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VV93_RS15140 728de29c2030514ff833d43ee4246f6b 548 PANTHER PTHR18968:SF116 1 546 4.9E-258 T 23-04-2016 VV93_RS15140 728de29c2030514ff833d43ee4246f6b 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 6.5E-210 T 23-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS15140 728de29c2030514ff833d43ee4246f6b 548 SUPERFAMILY SSF52467 182 342 1.08E-54 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VV93_RS15140 728de29c2030514ff833d43ee4246f6b 548 SUPERFAMILY SSF52518 1 178 1.72E-62 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS15140 728de29c2030514ff833d43ee4246f6b 548 Gene3D G3DSA:3.40.50.970 1 174 4.3E-72 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS15140 728de29c2030514ff833d43ee4246f6b 548 PANTHER PTHR18968 1 546 4.9E-258 T 23-04-2016 VV93_RS11845 94bc5c83d85729b7745add8a9ac6cba3 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-18 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS11845 94bc5c83d85729b7745add8a9ac6cba3 333 SUPERFAMILY SSF47413 1 60 1.78E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS11845 94bc5c83d85729b7745add8a9ac6cba3 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.3E-7 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS11845 94bc5c83d85729b7745add8a9ac6cba3 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.3E-7 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS11845 94bc5c83d85729b7745add8a9ac6cba3 333 PANTHER PTHR30146:SF55 1 330 2.6E-178 T 23-04-2016 VV93_RS11845 94bc5c83d85729b7745add8a9ac6cba3 333 SUPERFAMILY SSF53822 61 330 1.22E-83 T 23-04-2016 IPR028082 Periplasmic binding protein-like I VV93_RS11845 94bc5c83d85729b7745add8a9ac6cba3 333 Gene3D G3DSA:3.40.50.2300 59 166 6.6E-49 T 23-04-2016 VV93_RS11845 94bc5c83d85729b7745add8a9ac6cba3 333 PANTHER PTHR30146 1 330 2.6E-178 T 23-04-2016 VV93_RS11845 94bc5c83d85729b7745add8a9ac6cba3 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS11845 94bc5c83d85729b7745add8a9ac6cba3 333 Gene3D G3DSA:3.40.50.2300 167 331 6.8E-53 T 23-04-2016 VV93_RS11845 94bc5c83d85729b7745add8a9ac6cba3 333 Pfam PF13377 Periplasmic binding protein-like domain 168 329 1.3E-36 T 23-04-2016 VV93_RS11845 94bc5c83d85729b7745add8a9ac6cba3 333 SMART SM00354 1 71 2.8E-31 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS11845 94bc5c83d85729b7745add8a9ac6cba3 333 Gene3D G3DSA:1.10.260.40 2 58 1.1E-23 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS14535 94aca3ce8ddddda4824c0db92fb1331e 149 Gene3D G3DSA:3.40.50.9100 4 147 1.0E-67 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VV93_RS14535 94aca3ce8ddddda4824c0db92fb1331e 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 23-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VV93_RS14535 94aca3ce8ddddda4824c0db92fb1331e 149 PANTHER PTHR21272 2 149 7.0E-88 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VV93_RS14535 94aca3ce8ddddda4824c0db92fb1331e 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 7 149 2.0E-78 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VV93_RS14535 94aca3ce8ddddda4824c0db92fb1331e 149 PIRSF PIRSF001399 3 149 2.5E-58 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VV93_RS14535 94aca3ce8ddddda4824c0db92fb1331e 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 144 1.2E-63 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VV93_RS14535 94aca3ce8ddddda4824c0db92fb1331e 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 75.151 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VV93_RS14535 94aca3ce8ddddda4824c0db92fb1331e 149 SUPERFAMILY SSF52304 4 145 9.16E-62 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VV93_RS14535 94aca3ce8ddddda4824c0db92fb1331e 149 Pfam PF01220 Dehydroquinase class II 6 142 4.0E-59 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VV93_RS04230 6689c393b40bed091c93f7cb7538e05a 218 PANTHER PTHR10993 1 209 2.4E-77 T 23-04-2016 VV93_RS04230 6689c393b40bed091c93f7cb7538e05a 218 SUPERFAMILY SSF55681 3 205 1.57E-71 T 23-04-2016 VV93_RS04230 6689c393b40bed091c93f7cb7538e05a 218 Gene3D G3DSA:3.90.1550.10 2 202 3.2E-72 T 23-04-2016 VV93_RS04230 6689c393b40bed091c93f7cb7538e05a 218 Pfam PF03099 Biotin/lipoate A/B protein ligase family 58 158 2.8E-8 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 VV93_RS04230 6689c393b40bed091c93f7cb7538e05a 218 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 38.567 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VV93_RS04230 6689c393b40bed091c93f7cb7538e05a 218 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 23-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VV93_RS04230 6689c393b40bed091c93f7cb7538e05a 218 PIRSF PIRSF016262 1 217 5.2E-63 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VV93_RS04230 6689c393b40bed091c93f7cb7538e05a 218 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 25 203 6.2E-72 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VV93_RS04230 6689c393b40bed091c93f7cb7538e05a 218 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 4.0E-25 T 23-04-2016 VV93_RS03180 02a552920d57aaf0138a7844c760d050 320 Pfam PF02401 LytB protein 7 288 6.3E-92 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 VV93_RS03180 02a552920d57aaf0138a7844c760d050 320 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 290 1.3E-96 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 VV93_RS03180 02a552920d57aaf0138a7844c760d050 320 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 5 292 37.803 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 VV93_RS03180 02a552920d57aaf0138a7844c760d050 320 PANTHER PTHR30426 5 316 4.6E-156 T 23-04-2016 VV93_RS07505 3bf2dee03751fa1df136fef12be2292d 252 PANTHER PTHR10434:SF20 1 244 7.5E-127 T 23-04-2016 VV93_RS07505 3bf2dee03751fa1df136fef12be2292d 252 Pfam PF01553 Acyltransferase 56 180 2.4E-32 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VV93_RS07505 3bf2dee03751fa1df136fef12be2292d 252 Gene3D G3DSA:3.40.1130.10 46 247 8.9E-21 T 23-04-2016 VV93_RS07505 3bf2dee03751fa1df136fef12be2292d 252 PANTHER PTHR10434 1 244 7.5E-127 T 23-04-2016 VV93_RS07505 3bf2dee03751fa1df136fef12be2292d 252 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 4.4E-42 T 23-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 VV93_RS07505 3bf2dee03751fa1df136fef12be2292d 252 SMART SM00563 67 182 4.4E-40 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VV93_RS07505 3bf2dee03751fa1df136fef12be2292d 252 SUPERFAMILY SSF69593 4 242 6.28E-59 T 23-04-2016 VV93_RS09880 49d154f7c1d0ff856bbdae5aa3bce779 210 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 186 1.5E-48 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal VV93_RS09880 49d154f7c1d0ff856bbdae5aa3bce779 210 PANTHER PTHR22789:SF6 1 208 6.5E-113 T 23-04-2016 VV93_RS09880 49d154f7c1d0ff856bbdae5aa3bce779 210 Gene3D G3DSA:3.40.225.10 1 208 6.0E-69 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal VV93_RS09880 49d154f7c1d0ff856bbdae5aa3bce779 210 SUPERFAMILY SSF53639 1 205 1.28E-62 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal VV93_RS09880 49d154f7c1d0ff856bbdae5aa3bce779 210 PANTHER PTHR22789 1 208 6.5E-113 T 23-04-2016 VV93_RS09880 49d154f7c1d0ff856bbdae5aa3bce779 210 SMART SM01007 8 187 8.5E-62 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal VV93_RS12085 0b7e64ad5c8f6d6630ba8921306e41ca 239 PANTHER PTHR21234:SF8 3 234 1.3E-83 T 23-04-2016 VV93_RS12085 0b7e64ad5c8f6d6630ba8921306e41ca 239 Pfam PF01048 Phosphorylase superfamily 15 220 1.7E-39 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV93_RS12085 0b7e64ad5c8f6d6630ba8921306e41ca 239 SUPERFAMILY SSF53167 3 234 5.11E-93 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV93_RS12085 0b7e64ad5c8f6d6630ba8921306e41ca 239 PANTHER PTHR21234 3 234 1.3E-83 T 23-04-2016 IPR018017 Nucleoside phosphorylase VV93_RS12085 0b7e64ad5c8f6d6630ba8921306e41ca 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 23-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VV93_RS12085 0b7e64ad5c8f6d6630ba8921306e41ca 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 2.1E-120 T 23-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VV93_RS12085 0b7e64ad5c8f6d6630ba8921306e41ca 239 Gene3D G3DSA:3.40.50.1580 10 233 1.2E-82 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV93_RS12085 0b7e64ad5c8f6d6630ba8921306e41ca 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.76 T 23-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VV93_RS03105 389b2d48e0f5cf720bab8b76b089ec83 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.482 T 23-04-2016 IPR022927 RNA pyrophosphohydrolase RppH VV93_RS03105 389b2d48e0f5cf720bab8b76b089ec83 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 7.5E-8 T 23-04-2016 IPR020476 NUDIX hydrolase VV93_RS03105 389b2d48e0f5cf720bab8b76b089ec83 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 7.5E-8 T 23-04-2016 IPR020476 NUDIX hydrolase VV93_RS03105 389b2d48e0f5cf720bab8b76b089ec83 172 PANTHER PTHR23114 1 160 7.2E-64 T 23-04-2016 VV93_RS03105 389b2d48e0f5cf720bab8b76b089ec83 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VV93_RS03105 389b2d48e0f5cf720bab8b76b089ec83 172 SUPERFAMILY SSF55811 6 152 1.22E-31 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS03105 389b2d48e0f5cf720bab8b76b089ec83 172 Pfam PF00293 NUDIX domain 7 145 3.1E-27 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VV93_RS03105 389b2d48e0f5cf720bab8b76b089ec83 172 Gene3D G3DSA:3.90.79.10 5 151 4.9E-32 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS12345 817a06280ed2e8c121c84f7e9ea7e217 557 PANTHER PTHR30290:SF31 43 540 1.8E-156 T 23-04-2016 VV93_RS12345 817a06280ed2e8c121c84f7e9ea7e217 557 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 81 103 - T 23-04-2016 IPR023765 Solute-binding protein family 5, conserved site VV93_RS12345 817a06280ed2e8c121c84f7e9ea7e217 557 Gene3D G3DSA:3.10.105.10 270 512 6.0E-52 T 23-04-2016 VV93_RS12345 817a06280ed2e8c121c84f7e9ea7e217 557 PIRSF PIRSF002741 2 539 7.6E-69 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VV93_RS12345 817a06280ed2e8c121c84f7e9ea7e217 557 Gene3D G3DSA:3.90.76.10 44 193 2.7E-38 T 23-04-2016 VV93_RS12345 817a06280ed2e8c121c84f7e9ea7e217 557 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 452 4.8E-76 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain VV93_RS12345 817a06280ed2e8c121c84f7e9ea7e217 557 SUPERFAMILY SSF53850 37 541 9.77E-106 T 23-04-2016 VV93_RS12345 817a06280ed2e8c121c84f7e9ea7e217 557 PANTHER PTHR30290 43 540 1.8E-156 T 23-04-2016 VV93_RS06400 1c29d00bd65fda9a2f9dd4e71fe20722 139 SUPERFAMILY SSF54427 8 125 8.07E-23 T 23-04-2016 IPR032710 NTF2-like domain VV93_RS06400 1c29d00bd65fda9a2f9dd4e71fe20722 139 Gene3D G3DSA:3.10.450.50 9 133 8.2E-20 T 23-04-2016 IPR032710 NTF2-like domain VV93_RS06400 1c29d00bd65fda9a2f9dd4e71fe20722 139 Pfam PF12680 SnoaL-like domain 8 108 1.6E-13 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain VV93_RS03565 c089f6bc9682123be14fb20a648c64b1 107 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 3 107 4.0E-42 T 23-04-2016 IPR011298 FeS assembly scaffold SufA GO:0016226 VV93_RS03565 c089f6bc9682123be14fb20a648c64b1 107 SUPERFAMILY SSF89360 1 96 5.76E-35 T 23-04-2016 IPR000361 FeS cluster biogenesis VV93_RS03565 c089f6bc9682123be14fb20a648c64b1 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 3.9E-58 T 23-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 VV93_RS03565 c089f6bc9682123be14fb20a648c64b1 107 Gene3D G3DSA:2.60.300.12 2 97 4.4E-37 T 23-04-2016 IPR000361 FeS cluster biogenesis VV93_RS03565 c089f6bc9682123be14fb20a648c64b1 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.2E-26 T 23-04-2016 IPR000361 FeS cluster biogenesis VV93_RS03565 c089f6bc9682123be14fb20a648c64b1 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 5.2E-39 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 VV93_RS03565 c089f6bc9682123be14fb20a648c64b1 107 PANTHER PTHR10072 1 107 1.4E-53 T 23-04-2016 VV93_RS03565 c089f6bc9682123be14fb20a648c64b1 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 23-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site VV93_RS06685 3c3f59762c0982d868ee46634f312404 129 Pfam PF04024 PspC domain 4 62 1.2E-14 T 23-04-2016 IPR007168 Phage shock protein, PspC, N-terminal VV93_RS06685 3c3f59762c0982d868ee46634f312404 129 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 129 9.4E-48 T 23-04-2016 IPR014320 Phage shock protein, PspC VV93_RS10105 a6fa5a75febfb10ef986c208a4344274 173 SUPERFAMILY SSF53098 3 156 7.59E-56 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS10105 a6fa5a75febfb10ef986c208a4344274 173 Gene3D G3DSA:3.30.420.10 3 156 1.1E-67 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS10105 a6fa5a75febfb10ef986c208a4344274 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.4E-63 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VV93_RS10105 a6fa5a75febfb10ef986c208a4344274 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 23-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 VV93_RS10105 a6fa5a75febfb10ef986c208a4344274 173 PANTHER PTHR30194 1 169 7.6E-72 T 23-04-2016 VV93_RS10105 a6fa5a75febfb10ef986c208a4344274 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 1.2E-75 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VV93_RS10105 a6fa5a75febfb10ef986c208a4344274 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.921 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VV93_RS10105 a6fa5a75febfb10ef986c208a4344274 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 6.9E-43 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VV93_RS10105 a6fa5a75febfb10ef986c208a4344274 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 6.9E-43 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VV93_RS10105 a6fa5a75febfb10ef986c208a4344274 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 6.9E-43 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VV93_RS10105 a6fa5a75febfb10ef986c208a4344274 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 6.9E-43 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VV93_RS10105 a6fa5a75febfb10ef986c208a4344274 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 6.9E-43 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VV93_RS13490 4eb9e67d5037f0fc6054df2a45a62157 347 SUPERFAMILY SSF53067 154 340 4.66E-51 T 23-04-2016 VV93_RS13490 4eb9e67d5037f0fc6054df2a45a62157 347 Gene3D G3DSA:3.30.420.40 9 163 2.5E-46 T 23-04-2016 VV93_RS13490 4eb9e67d5037f0fc6054df2a45a62157 347 PANTHER PTHR19375:SF117 9 336 4.9E-189 T 23-04-2016 VV93_RS13490 4eb9e67d5037f0fc6054df2a45a62157 347 SUPERFAMILY SSF53067 9 152 2.71E-37 T 23-04-2016 VV93_RS13490 4eb9e67d5037f0fc6054df2a45a62157 347 Pfam PF06723 MreB/Mbl protein 11 338 1.6E-149 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VV93_RS13490 4eb9e67d5037f0fc6054df2a45a62157 347 Gene3D G3DSA:3.90.640.10 191 263 5.5E-31 T 23-04-2016 VV93_RS13490 4eb9e67d5037f0fc6054df2a45a62157 347 PANTHER PTHR19375 9 336 4.9E-189 T 23-04-2016 VV93_RS13490 4eb9e67d5037f0fc6054df2a45a62157 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.4E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VV93_RS13490 4eb9e67d5037f0fc6054df2a45a62157 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.4E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VV93_RS13490 4eb9e67d5037f0fc6054df2a45a62157 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.4E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VV93_RS13490 4eb9e67d5037f0fc6054df2a45a62157 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.4E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VV93_RS13490 4eb9e67d5037f0fc6054df2a45a62157 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.4E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VV93_RS13490 4eb9e67d5037f0fc6054df2a45a62157 347 Gene3D G3DSA:3.30.420.40 267 321 1.6E-35 T 23-04-2016 VV93_RS13490 4eb9e67d5037f0fc6054df2a45a62157 347 Gene3D G3DSA:3.30.420.40 164 190 1.6E-35 T 23-04-2016 VV93_RS13490 4eb9e67d5037f0fc6054df2a45a62157 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 2.8E-166 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VV93_RS10970 69ddf80cd6db2542c6e3b8bb80c5030b 376 PANTHER PTHR30531:SF4 1 361 1.3E-238 T 23-04-2016 VV93_RS10970 69ddf80cd6db2542c6e3b8bb80c5030b 376 Gene3D G3DSA:3.40.1690.10 218 357 3.6E-62 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal VV93_RS10970 69ddf80cd6db2542c6e3b8bb80c5030b 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 1.2E-134 T 23-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 VV93_RS10970 69ddf80cd6db2542c6e3b8bb80c5030b 376 PANTHER PTHR30531 1 361 1.3E-238 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VV93_RS10970 69ddf80cd6db2542c6e3b8bb80c5030b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 7.9E-40 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VV93_RS10970 69ddf80cd6db2542c6e3b8bb80c5030b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 7.9E-40 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VV93_RS10970 69ddf80cd6db2542c6e3b8bb80c5030b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 7.9E-40 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VV93_RS10970 69ddf80cd6db2542c6e3b8bb80c5030b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 7.9E-40 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VV93_RS10970 69ddf80cd6db2542c6e3b8bb80c5030b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 7.9E-40 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VV93_RS10970 69ddf80cd6db2542c6e3b8bb80c5030b 376 SUPERFAMILY SSF160544 250 355 2.49E-39 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal VV93_RS10970 69ddf80cd6db2542c6e3b8bb80c5030b 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 1.3E-121 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VV93_RS01030 4ab577a435548bf24a7f2f120ee663ff 646 Pfam PF05170 AsmA family 1 571 2.2E-179 T 23-04-2016 IPR007844 AsmA VV93_RS10420 5eabb06658e513489e6c3b6a6030cd15 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.256 T 23-04-2016 IPR006698 Uncharacterised protein family UPF0229 VV93_RS10420 5eabb06658e513489e6c3b6a6030cd15 423 PANTHER PTHR30510 1 421 6.8E-189 T 23-04-2016 VV93_RS10420 5eabb06658e513489e6c3b6a6030cd15 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 2.6E-188 T 23-04-2016 IPR006698 Uncharacterised protein family UPF0229 VV93_RS01090 3be256ddb814003bc2ef177ba6e45fc1 340 SUPERFAMILY SSF54523 40 104 1.54E-35 T 23-04-2016 VV93_RS01090 3be256ddb814003bc2ef177ba6e45fc1 340 SUPERFAMILY SSF54523 289 329 1.54E-35 T 23-04-2016 VV93_RS01090 3be256ddb814003bc2ef177ba6e45fc1 340 PANTHER PTHR38831:SF1 8 340 4.2E-64 T 23-04-2016 VV93_RS01090 3be256ddb814003bc2ef177ba6e45fc1 340 SUPERFAMILY SSF158544 105 217 2.07E-29 T 23-04-2016 VV93_RS01090 3be256ddb814003bc2ef177ba6e45fc1 340 Pfam PF03934 Type II secretion system (T2SS), protein K 34 321 1.8E-86 T 23-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VV93_RS01090 3be256ddb814003bc2ef177ba6e45fc1 340 PIRSF PIRSF002786 4 332 1.6E-64 T 23-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VV93_RS01090 3be256ddb814003bc2ef177ba6e45fc1 340 Gene3D G3DSA:1.10.40.60 220 288 1.3E-26 T 23-04-2016 VV93_RS01090 3be256ddb814003bc2ef177ba6e45fc1 340 Gene3D G3DSA:1.10.40.60 109 218 1.7E-34 T 23-04-2016 VV93_RS01090 3be256ddb814003bc2ef177ba6e45fc1 340 Gene3D G3DSA:3.30.1300.30 30 108 1.5E-30 T 23-04-2016 VV93_RS01090 3be256ddb814003bc2ef177ba6e45fc1 340 SUPERFAMILY SSF158544 219 287 1.31E-19 T 23-04-2016 VV93_RS01090 3be256ddb814003bc2ef177ba6e45fc1 340 PANTHER PTHR38831 8 340 4.2E-64 T 23-04-2016 VV93_RS03685 fe4dae2bc4c695bce4fc0a32f7f9e6d3 300 PANTHER PTHR30537 1 298 2.9E-94 T 23-04-2016 VV93_RS03685 fe4dae2bc4c695bce4fc0a32f7f9e6d3 300 SUPERFAMILY SSF53850 95 299 9.41E-26 T 23-04-2016 VV93_RS03685 fe4dae2bc4c695bce4fc0a32f7f9e6d3 300 SUPERFAMILY SSF46785 9 113 9.95E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS03685 fe4dae2bc4c695bce4fc0a32f7f9e6d3 300 Gene3D G3DSA:3.40.190.10 95 198 4.6E-25 T 23-04-2016 VV93_RS03685 fe4dae2bc4c695bce4fc0a32f7f9e6d3 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.3E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS03685 fe4dae2bc4c695bce4fc0a32f7f9e6d3 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.3E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS03685 fe4dae2bc4c695bce4fc0a32f7f9e6d3 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.3E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS03685 fe4dae2bc4c695bce4fc0a32f7f9e6d3 300 PANTHER PTHR30537:SF8 1 298 2.9E-94 T 23-04-2016 VV93_RS03685 fe4dae2bc4c695bce4fc0a32f7f9e6d3 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.4E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS03685 fe4dae2bc4c695bce4fc0a32f7f9e6d3 300 Gene3D G3DSA:1.10.10.10 9 89 7.8E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS03685 fe4dae2bc4c695bce4fc0a32f7f9e6d3 300 Pfam PF03466 LysR substrate binding domain 94 294 1.6E-24 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS08750 e9a7d67e785a84eeb50388bc6adb2d2a 229 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.7E-12 T 23-04-2016 IPR024498 Domain of unknown function DUF2786 VV93_RS08750 e9a7d67e785a84eeb50388bc6adb2d2a 229 PIRSF PIRSF028111 1 229 1.6E-86 T 23-04-2016 IPR016868 Bacteriophage B3, Orf5 VV93_RS05415 05ba4973a5852da77193a543135af638 153 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 1.6E-21 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VV93_RS05415 05ba4973a5852da77193a543135af638 153 Gene3D G3DSA:1.10.10.10 3 54 2.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS05415 05ba4973a5852da77193a543135af638 153 SMART SM00344 2 111 1.6E-46 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VV93_RS05415 05ba4973a5852da77193a543135af638 153 PANTHER PTHR30154 1 151 1.4E-87 T 23-04-2016 VV93_RS05415 05ba4973a5852da77193a543135af638 153 Gene3D G3DSA:3.30.70.920 55 139 4.3E-28 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VV93_RS05415 05ba4973a5852da77193a543135af638 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 2.2E-13 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VV93_RS05415 05ba4973a5852da77193a543135af638 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 2.2E-13 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VV93_RS05415 05ba4973a5852da77193a543135af638 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 2.2E-13 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VV93_RS05415 05ba4973a5852da77193a543135af638 153 PANTHER PTHR30154:SF17 1 151 1.4E-87 T 23-04-2016 VV93_RS05415 05ba4973a5852da77193a543135af638 153 SUPERFAMILY SSF46785 2 91 1.17E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS05415 05ba4973a5852da77193a543135af638 153 SUPERFAMILY SSF54909 62 151 2.15E-21 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel VV93_RS05415 05ba4973a5852da77193a543135af638 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 2.8E-18 T 23-04-2016 VV93_RS05415 05ba4973a5852da77193a543135af638 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 23-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VV93_RS15080 42a8bc78fc6a0cb7b6ff263c94d4f480 426 Gene3D G3DSA:3.40.50.150 229 424 2.4E-59 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS15080 42a8bc78fc6a0cb7b6ff263c94d4f480 426 SUPERFAMILY SSF48013 1 146 9.16E-37 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VV93_RS15080 42a8bc78fc6a0cb7b6ff263c94d4f480 426 Gene3D G3DSA:1.10.940.10 1 144 2.3E-44 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VV93_RS15080 42a8bc78fc6a0cb7b6ff263c94d4f480 426 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 23-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS15080 42a8bc78fc6a0cb7b6ff263c94d4f480 426 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 6.7E-69 T 23-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS15080 42a8bc78fc6a0cb7b6ff263c94d4f480 426 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 426 6.3E-153 T 23-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS15080 42a8bc78fc6a0cb7b6ff263c94d4f480 426 PANTHER PTHR22807:SF30 25 424 1.2E-125 T 23-04-2016 VV93_RS15080 42a8bc78fc6a0cb7b6ff263c94d4f480 426 Pfam PF01029 NusB family 1 123 9.3E-24 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VV93_RS15080 42a8bc78fc6a0cb7b6ff263c94d4f480 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 1.9E-30 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS15080 42a8bc78fc6a0cb7b6ff263c94d4f480 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 1.9E-30 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS15080 42a8bc78fc6a0cb7b6ff263c94d4f480 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 1.9E-30 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS15080 42a8bc78fc6a0cb7b6ff263c94d4f480 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 1.9E-30 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS15080 42a8bc78fc6a0cb7b6ff263c94d4f480 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 1.9E-30 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS15080 42a8bc78fc6a0cb7b6ff263c94d4f480 426 Gene3D G3DSA:1.10.287.730 145 169 1.1E-14 T 23-04-2016 VV93_RS15080 42a8bc78fc6a0cb7b6ff263c94d4f480 426 PANTHER PTHR22807 25 424 1.2E-125 T 23-04-2016 VV93_RS15080 42a8bc78fc6a0cb7b6ff263c94d4f480 426 Gene3D G3DSA:3.30.70.1170 170 227 6.2E-26 T 23-04-2016 VV93_RS15080 42a8bc78fc6a0cb7b6ff263c94d4f480 426 SUPERFAMILY SSF53335 139 424 5.63E-79 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS06135 42fb1e9cdaa7f06f118c55cf0b7b254c 307 PIRSF PIRSF000446 1 307 4.5E-138 T 23-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 VV93_RS06135 42fb1e9cdaa7f06f118c55cf0b7b254c 307 PANTHER PTHR10982 1 306 3.4E-165 T 23-04-2016 VV93_RS06135 42fb1e9cdaa7f06f118c55cf0b7b254c 307 Gene3D G3DSA:3.30.70.250 125 196 8.4E-33 T 23-04-2016 VV93_RS06135 42fb1e9cdaa7f06f118c55cf0b7b254c 307 Pfam PF00698 Acyl transferase domain 7 297 4.1E-36 T 23-04-2016 IPR014043 Acyl transferase VV93_RS06135 42fb1e9cdaa7f06f118c55cf0b7b254c 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 306 2.2E-40 T 23-04-2016 IPR020801 Polyketide synthase, acyl transferase domain VV93_RS06135 42fb1e9cdaa7f06f118c55cf0b7b254c 307 SUPERFAMILY SSF52151 190 305 1.99E-81 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VV93_RS06135 42fb1e9cdaa7f06f118c55cf0b7b254c 307 SUPERFAMILY SSF52151 4 122 1.99E-81 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VV93_RS06135 42fb1e9cdaa7f06f118c55cf0b7b254c 307 Gene3D G3DSA:3.40.366.10 197 301 1.7E-72 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 VV93_RS06135 42fb1e9cdaa7f06f118c55cf0b7b254c 307 Gene3D G3DSA:3.40.366.10 2 122 1.7E-72 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 VV93_RS06135 42fb1e9cdaa7f06f118c55cf0b7b254c 307 SUPERFAMILY SSF55048 128 197 1.31E-18 T 23-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 VV93_RS06135 42fb1e9cdaa7f06f118c55cf0b7b254c 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 6.4E-128 T 23-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VV93_RS13130 5c7a3c4196d00776083ce7f996bbd4bd 541 SMART SM00283 277 538 1.5E-69 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS13130 5c7a3c4196d00776083ce7f996bbd4bd 541 SUPERFAMILY SSF58104 243 539 5.49E-70 T 23-04-2016 VV93_RS13130 5c7a3c4196d00776083ce7f996bbd4bd 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 348 537 1.1E-48 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS13130 5c7a3c4196d00776083ce7f996bbd4bd 541 PANTHER PTHR32089:SF31 13 541 8.0E-219 T 23-04-2016 VV93_RS13130 5c7a3c4196d00776083ce7f996bbd4bd 541 Gene3D G3DSA:3.30.450.20 18 178 2.3E-32 T 23-04-2016 VV93_RS13130 5c7a3c4196d00776083ce7f996bbd4bd 541 Gene3D G3DSA:1.10.287.950 292 508 2.5E-55 T 23-04-2016 VV93_RS13130 5c7a3c4196d00776083ce7f996bbd4bd 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 6.4E-26 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VV93_RS13130 5c7a3c4196d00776083ce7f996bbd4bd 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 6.4E-26 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VV93_RS13130 5c7a3c4196d00776083ce7f996bbd4bd 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 204 6.4E-26 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VV93_RS13130 5c7a3c4196d00776083ce7f996bbd4bd 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 6.4E-26 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VV93_RS13130 5c7a3c4196d00776083ce7f996bbd4bd 541 Pfam PF17200 Single Cache domain 2 36 185 4.4E-33 T 23-04-2016 IPR033480 Single Cache domain 2 VV93_RS13130 5c7a3c4196d00776083ce7f996bbd4bd 541 SMART SM01049 30 124 2.3E-18 T 23-04-2016 IPR033480 Single Cache domain 2 VV93_RS13130 5c7a3c4196d00776083ce7f996bbd4bd 541 PANTHER PTHR32089 13 541 8.0E-219 T 23-04-2016 VV93_RS14300 c5f88c1eede8a3baf538eca3e038a6c0 352 Gene3D G3DSA:3.40.50.300 115 274 5.7E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14300 c5f88c1eede8a3baf538eca3e038a6c0 352 Pfam PF03193 Protein of unknown function, DUF258 100 275 2.7E-58 T 23-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 VV93_RS14300 c5f88c1eede8a3baf538eca3e038a6c0 352 PANTHER PTHR32120:SF2 4 351 8.3E-156 T 23-04-2016 VV93_RS14300 c5f88c1eede8a3baf538eca3e038a6c0 352 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 75 333 1.6E-89 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 VV93_RS14300 c5f88c1eede8a3baf538eca3e038a6c0 352 Gene3D G3DSA:1.10.40.50 275 344 3.5E-25 T 23-04-2016 VV93_RS14300 c5f88c1eede8a3baf538eca3e038a6c0 352 SUPERFAMILY SSF52540 114 337 1.41E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14300 c5f88c1eede8a3baf538eca3e038a6c0 352 PANTHER PTHR32120 4 351 8.3E-156 T 23-04-2016 VV93_RS14300 c5f88c1eede8a3baf538eca3e038a6c0 352 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 41 339 37.653 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 VV93_RS03040 da786924ee62fe880b8e9c416ca9000e 239 PANTHER PTHR18895:SF73 32 229 9.6E-65 T 23-04-2016 VV93_RS03040 da786924ee62fe880b8e9c416ca9000e 239 Pfam PF05175 Methyltransferase small domain 42 135 6.0E-18 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VV93_RS03040 da786924ee62fe880b8e9c416ca9000e 239 PANTHER PTHR18895 32 229 9.6E-65 T 23-04-2016 VV93_RS03040 da786924ee62fe880b8e9c416ca9000e 239 SUPERFAMILY SSF53335 34 196 8.36E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS03040 da786924ee62fe880b8e9c416ca9000e 239 Gene3D G3DSA:3.40.50.150 30 232 5.2E-43 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS03040 da786924ee62fe880b8e9c416ca9000e 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 111 123 4.9E-6 T 23-04-2016 VV93_RS03040 da786924ee62fe880b8e9c416ca9000e 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 141 165 4.9E-6 T 23-04-2016 VV93_RS03040 da786924ee62fe880b8e9c416ca9000e 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 46 60 4.9E-6 T 23-04-2016 VV93_RS03040 da786924ee62fe880b8e9c416ca9000e 239 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 52.965 T 23-04-2016 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 VV93_RS03040 da786924ee62fe880b8e9c416ca9000e 239 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV93_RS14595 ac587cf833895ec2d6a017060dd8257b 230 PIRSF PIRSF028160 1 230 1.8E-122 T 23-04-2016 IPR016872 Uncharacterised conserved protein UCP028160 VV93_RS14595 ac587cf833895ec2d6a017060dd8257b 230 Pfam PF07356 Protein of unknown function (DUF1481) 32 225 6.5E-58 T 23-04-2016 IPR010858 Protein of unknown function DUF1481 VV93_RS04130 3e2983a56e0ac54f355b29798fab0be3 363 PANTHER PTHR37524:SF2 2 362 5.7E-191 T 23-04-2016 VV93_RS04130 3e2983a56e0ac54f355b29798fab0be3 363 PANTHER PTHR37524 2 362 5.7E-191 T 23-04-2016 VV93_RS04130 3e2983a56e0ac54f355b29798fab0be3 363 Pfam PF01728 FtsJ-like methyltransferase 188 251 6.9E-6 T 23-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VV93_RS04130 3e2983a56e0ac54f355b29798fab0be3 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 84.432 T 23-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VV93_RS04130 3e2983a56e0ac54f355b29798fab0be3 363 Gene3D G3DSA:3.40.50.150 186 281 7.5E-12 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS04130 3e2983a56e0ac54f355b29798fab0be3 363 PIRSF PIRSF028774 1 362 3.3E-193 T 23-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VV93_RS04130 3e2983a56e0ac54f355b29798fab0be3 363 SUPERFAMILY SSF53335 186 281 2.22E-11 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS11480 41e705eebc3ea5b113708b0bf32bacd6 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 40.85 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 VV93_RS11480 41e705eebc3ea5b113708b0bf32bacd6 242 PANTHER PTHR12534 1 231 1.9E-121 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 VV93_RS11480 41e705eebc3ea5b113708b0bf32bacd6 242 Gene3D G3DSA:3.40.50.10490 158 233 8.8E-65 T 23-04-2016 VV93_RS11480 41e705eebc3ea5b113708b0bf32bacd6 242 Gene3D G3DSA:3.40.50.10490 23 99 8.8E-65 T 23-04-2016 VV93_RS11480 41e705eebc3ea5b113708b0bf32bacd6 242 Pfam PF00318 Ribosomal protein S2 9 224 4.8E-93 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS11480 41e705eebc3ea5b113708b0bf32bacd6 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 23-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VV93_RS11480 41e705eebc3ea5b113708b0bf32bacd6 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 23-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VV93_RS11480 41e705eebc3ea5b113708b0bf32bacd6 242 SUPERFAMILY SSF52313 6 232 3.92E-95 T 23-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain VV93_RS11480 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.1E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS11480 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.1E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS11480 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.1E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS11480 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.1E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS11480 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.1E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS11480 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.1E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS11480 41e705eebc3ea5b113708b0bf32bacd6 242 Gene3D G3DSA:1.10.287.610 100 152 7.7E-26 T 23-04-2016 VV93_RS11480 41e705eebc3ea5b113708b0bf32bacd6 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 3.9E-106 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 VV93_RS14430 84875da9773d1c49592de630c5c13522 448 PIRSF PIRSF006603 1 446 1.7E-131 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VV93_RS14430 84875da9773d1c49592de630c5c13522 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 413 6.9E-59 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VV93_RS14430 84875da9773d1c49592de630c5c13522 448 PANTHER PTHR11206:SF142 3 444 1.1E-236 T 23-04-2016 VV93_RS14430 84875da9773d1c49592de630c5c13522 448 Pfam PF01554 MatE 245 406 9.2E-24 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VV93_RS14430 84875da9773d1c49592de630c5c13522 448 Pfam PF01554 MatE 22 181 1.3E-26 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VV93_RS14430 84875da9773d1c49592de630c5c13522 448 PANTHER PTHR11206 3 444 1.1E-236 T 23-04-2016 VV93_RS14485 662a763a5a98dc5835f43de9dd7deef6 598 Pfam PF13899 Thioredoxin-like 489 567 1.8E-13 T 23-04-2016 VV93_RS14485 662a763a5a98dc5835f43de9dd7deef6 598 Gene3D G3DSA:2.60.40.1250 30 147 1.9E-42 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VV93_RS14485 662a763a5a98dc5835f43de9dd7deef6 598 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 597 38.376 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VV93_RS14485 662a763a5a98dc5835f43de9dd7deef6 598 SUPERFAMILY SSF74863 34 147 6.8E-41 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VV93_RS14485 662a763a5a98dc5835f43de9dd7deef6 598 Pfam PF11412 Disulphide bond corrector protein DsbC 36 146 4.9E-30 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VV93_RS14485 662a763a5a98dc5835f43de9dd7deef6 598 Gene3D G3DSA:3.40.30.10 484 596 1.0E-36 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS14485 662a763a5a98dc5835f43de9dd7deef6 598 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 205 404 1.1E-17 T 23-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VV93_RS14485 662a763a5a98dc5835f43de9dd7deef6 598 PANTHER PTHR32234 12 147 1.3E-221 T 23-04-2016 VV93_RS14485 662a763a5a98dc5835f43de9dd7deef6 598 PANTHER PTHR32234 168 598 1.3E-221 T 23-04-2016 VV93_RS14485 662a763a5a98dc5835f43de9dd7deef6 598 PANTHER PTHR32234:SF0 12 147 1.3E-221 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VV93_RS14485 662a763a5a98dc5835f43de9dd7deef6 598 PANTHER PTHR32234:SF0 168 598 1.3E-221 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VV93_RS14485 662a763a5a98dc5835f43de9dd7deef6 598 SUPERFAMILY SSF52833 480 595 8.2E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS14485 662a763a5a98dc5835f43de9dd7deef6 598 ProSitePatterns PS00194 Thioredoxin family active site. 505 523 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VV93_RS01465 e92989b1f1b25736b8b56be82d15c652 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.671 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01465 e92989b1f1b25736b8b56be82d15c652 56 SUPERFAMILY SSF57829 3 54 7.94E-19 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 VV93_RS01465 e92989b1f1b25736b8b56be82d15c652 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 1.6E-26 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01465 e92989b1f1b25736b8b56be82d15c652 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 23-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01465 e92989b1f1b25736b8b56be82d15c652 56 Pfam PF00471 Ribosomal protein L33 8 54 3.3E-17 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01465 e92989b1f1b25736b8b56be82d15c652 56 PANTHER PTHR15238 1 56 1.2E-23 T 23-04-2016 VV93_RS07405 9883a057fa1ec486942f523e0a352604 216 Pfam PF04055 Radical SAM superfamily 19 116 3.1E-8 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VV93_RS07405 9883a057fa1ec486942f523e0a352604 216 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 2 215 3.0E-110 T 23-04-2016 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 VV93_RS07405 9883a057fa1ec486942f523e0a352604 216 PANTHER PTHR11228 1 49 1.8E-47 T 23-04-2016 VV93_RS07405 9883a057fa1ec486942f523e0a352604 216 PANTHER PTHR11228 65 215 1.8E-47 T 23-04-2016 VV93_RS07405 9883a057fa1ec486942f523e0a352604 216 PANTHER PTHR11228:SF6 1 49 1.8E-47 T 23-04-2016 VV93_RS07405 9883a057fa1ec486942f523e0a352604 216 PANTHER PTHR11228:SF6 65 215 1.8E-47 T 23-04-2016 VV93_RS07405 9883a057fa1ec486942f523e0a352604 216 PIRSF PIRSF000370 1 216 3.4E-66 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 VV93_RS07405 9883a057fa1ec486942f523e0a352604 216 SUPERFAMILY SSF102114 19 115 7.32E-7 T 23-04-2016 VV93_RS07405 9883a057fa1ec486942f523e0a352604 216 Pfam PF13394 4Fe-4S single cluster domain 17 127 8.1E-11 T 23-04-2016 VV93_RS07405 9883a057fa1ec486942f523e0a352604 216 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 1 216 31.705 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 VV93_RS07405 9883a057fa1ec486942f523e0a352604 216 Gene3D G3DSA:3.20.20.70 23 115 1.3E-7 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS08495 e3100b58b74d2042e5e78738ea966ae3 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 93 2.0E-13 T 23-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VV93_RS08495 e3100b58b74d2042e5e78738ea966ae3 99 PANTHER PTHR33755:SF3 2 98 6.3E-31 T 23-04-2016 VV93_RS08495 e3100b58b74d2042e5e78738ea966ae3 99 PANTHER PTHR33755 2 98 6.3E-31 T 23-04-2016 VV93_RS06760 2f5cabd7b9432bf11c97464f4d2758d1 509 Gene3D G3DSA:1.10.8.60 367 416 2.4E-15 T 23-04-2016 VV93_RS06760 2f5cabd7b9432bf11c97464f4d2758d1 509 SUPERFAMILY SSF55781 7 166 3.71E-17 T 23-04-2016 IPR029016 GAF domain-like VV93_RS06760 2f5cabd7b9432bf11c97464f4d2758d1 509 SUPERFAMILY SSF52540 193 430 1.13E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06760 2f5cabd7b9432bf11c97464f4d2758d1 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV93_RS06760 2f5cabd7b9432bf11c97464f4d2758d1 509 Pfam PF02954 Bacterial regulatory protein, Fis family 469 500 1.1E-4 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS06760 2f5cabd7b9432bf11c97464f4d2758d1 509 Gene3D G3DSA:1.10.10.60 417 507 2.5E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS06760 2f5cabd7b9432bf11c97464f4d2758d1 509 Gene3D G3DSA:3.30.450.40 7 174 3.1E-16 T 23-04-2016 IPR029016 GAF domain-like VV93_RS06760 2f5cabd7b9432bf11c97464f4d2758d1 509 SMART SM00065 21 170 2.0E-4 T 23-04-2016 IPR003018 GAF domain GO:0005515 VV93_RS06760 2f5cabd7b9432bf11c97464f4d2758d1 509 SMART SM00382 214 358 1.4E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS06760 2f5cabd7b9432bf11c97464f4d2758d1 509 PANTHER PTHR32071 171 507 4.9E-144 T 23-04-2016 VV93_RS06760 2f5cabd7b9432bf11c97464f4d2758d1 509 PANTHER PTHR32071:SF35 171 507 4.9E-144 T 23-04-2016 VV93_RS06760 2f5cabd7b9432bf11c97464f4d2758d1 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VV93_RS06760 2f5cabd7b9432bf11c97464f4d2758d1 509 Pfam PF00158 Sigma-54 interaction domain 195 361 8.5E-70 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV93_RS06760 2f5cabd7b9432bf11c97464f4d2758d1 509 Gene3D G3DSA:3.40.50.300 191 366 1.8E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06760 2f5cabd7b9432bf11c97464f4d2758d1 509 SUPERFAMILY SSF46689 459 507 8.96E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS13250 7d95f949944955a88e7be5ba8f2f11a1 101 SUPERFAMILY SSF52794 1 101 9.68E-36 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VV93_RS13250 7d95f949944955a88e7be5ba8f2f11a1 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 4.7E-24 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VV93_RS13250 7d95f949944955a88e7be5ba8f2f11a1 101 Gene3D G3DSA:3.40.50.270 1 101 3.0E-38 T 23-04-2016 VV93_RS13250 7d95f949944955a88e7be5ba8f2f11a1 101 PANTHER PTHR34581:SF2 2 101 9.8E-49 T 23-04-2016 VV93_RS13250 7d95f949944955a88e7be5ba8f2f11a1 101 PANTHER PTHR34581 2 101 9.8E-49 T 23-04-2016 VV93_RS02990 7406f65fcf7ebc3bc6456e9a985eb701 318 PRINTS PR00958 Homoserine kinase signature 260 275 2.1E-31 T 23-04-2016 VV93_RS02990 7406f65fcf7ebc3bc6456e9a985eb701 318 PRINTS PR00958 Homoserine kinase signature 143 156 2.1E-31 T 23-04-2016 VV93_RS02990 7406f65fcf7ebc3bc6456e9a985eb701 318 PRINTS PR00958 Homoserine kinase signature 10 25 2.1E-31 T 23-04-2016 VV93_RS02990 7406f65fcf7ebc3bc6456e9a985eb701 318 PRINTS PR00958 Homoserine kinase signature 103 118 2.1E-31 T 23-04-2016 VV93_RS02990 7406f65fcf7ebc3bc6456e9a985eb701 318 PRINTS PR00958 Homoserine kinase signature 181 198 2.1E-31 T 23-04-2016 VV93_RS02990 7406f65fcf7ebc3bc6456e9a985eb701 318 SUPERFAMILY SSF54211 3 191 2.2E-35 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS02990 7406f65fcf7ebc3bc6456e9a985eb701 318 PANTHER PTHR20861:SF1 1 317 5.9E-122 T 23-04-2016 VV93_RS02990 7406f65fcf7ebc3bc6456e9a985eb701 318 PIRSF PIRSF000676 1 316 7.6E-79 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 VV93_RS02990 7406f65fcf7ebc3bc6456e9a985eb701 318 SUPERFAMILY SSF55060 178 294 9.35E-33 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain VV93_RS02990 7406f65fcf7ebc3bc6456e9a985eb701 318 Gene3D G3DSA:3.30.70.890 174 304 7.2E-41 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain VV93_RS02990 7406f65fcf7ebc3bc6456e9a985eb701 318 PANTHER PTHR20861 1 317 5.9E-122 T 23-04-2016 VV93_RS02990 7406f65fcf7ebc3bc6456e9a985eb701 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 313 8.5E-109 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 VV93_RS02990 7406f65fcf7ebc3bc6456e9a985eb701 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 23-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VV93_RS02990 7406f65fcf7ebc3bc6456e9a985eb701 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 3.5E-13 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 VV93_RS02990 7406f65fcf7ebc3bc6456e9a985eb701 318 Hamap MF_00384 Homoserine kinase [thrB]. 3 313 30.036 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 VV93_RS02990 7406f65fcf7ebc3bc6456e9a985eb701 318 Gene3D G3DSA:3.30.230.10 2 165 4.2E-45 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV93_RS02990 7406f65fcf7ebc3bc6456e9a985eb701 318 Pfam PF08544 GHMP kinases C terminal 218 292 1.2E-9 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain VV93_RS14725 4ffef68136ed31c07d263871ffe88a46 347 Gene3D G3DSA:3.30.465.10 76 233 3.3E-51 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VV93_RS14725 4ffef68136ed31c07d263871ffe88a46 347 Pfam PF01565 FAD binding domain 23 144 1.5E-19 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VV93_RS14725 4ffef68136ed31c07d263871ffe88a46 347 PANTHER PTHR21071 1 340 2.0E-159 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS14725 4ffef68136ed31c07d263871ffe88a46 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 332 7.8E-33 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS14725 4ffef68136ed31c07d263871ffe88a46 347 Gene3D G3DSA:3.30.43.10 7 71 5.6E-21 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 VV93_RS14725 4ffef68136ed31c07d263871ffe88a46 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 80.927 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS14725 4ffef68136ed31c07d263871ffe88a46 347 SUPERFAMILY SSF56176 8 197 1.83E-41 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VV93_RS14725 4ffef68136ed31c07d263871ffe88a46 347 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 333 6.8E-91 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS14725 4ffef68136ed31c07d263871ffe88a46 347 SUPERFAMILY SSF56194 207 342 1.83E-46 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS14725 4ffef68136ed31c07d263871ffe88a46 347 Gene3D G3DSA:3.90.78.10 234 335 3.7E-40 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS14725 4ffef68136ed31c07d263871ffe88a46 347 PANTHER PTHR21071:SF6 1 340 2.0E-159 T 23-04-2016 VV93_RS10230 4f090b430e8bc02413dd36c78e4c0d09 500 Pfam PF00534 Glycosyl transferases group 1 314 462 1.3E-13 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 VV93_RS10230 4f090b430e8bc02413dd36c78e4c0d09 500 Hamap MF_00484 Glycogen synthase [glgA]. 21 498 38.835 T 23-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 VV93_RS10230 4f090b430e8bc02413dd36c78e4c0d09 500 Gene3D G3DSA:3.40.50.2000 271 480 3.0E-64 T 23-04-2016 VV93_RS10230 4f090b430e8bc02413dd36c78e4c0d09 500 PANTHER PTHR12526 1 500 1.5E-115 T 23-04-2016 VV93_RS10230 4f090b430e8bc02413dd36c78e4c0d09 500 PANTHER PTHR12526:SF17 1 500 1.5E-115 T 23-04-2016 VV93_RS10230 4f090b430e8bc02413dd36c78e4c0d09 500 SUPERFAMILY SSF53756 18 500 4.71E-108 T 23-04-2016 VV93_RS10230 4f090b430e8bc02413dd36c78e4c0d09 500 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 22 497 3.6E-162 T 23-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 VV93_RS10230 4f090b430e8bc02413dd36c78e4c0d09 500 Pfam PF08323 Starch synthase catalytic domain 23 254 3.0E-65 T 23-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 VV93_RS00080 35068cb158c732d1d07b72b3048e89a6 326 Pfam PF00107 Zinc-binding dehydrogenase 159 272 1.1E-10 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VV93_RS00080 35068cb158c732d1d07b72b3048e89a6 326 SMART SM00829 13 324 4.5E-5 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VV93_RS00080 35068cb158c732d1d07b72b3048e89a6 326 Gene3D G3DSA:3.90.180.10 15 139 3.4E-8 T 23-04-2016 IPR011032 GroES-like VV93_RS00080 35068cb158c732d1d07b72b3048e89a6 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 4 326 1.8E-137 T 23-04-2016 IPR014188 Acrylyl-CoA reductase AcuI VV93_RS00080 35068cb158c732d1d07b72b3048e89a6 326 SUPERFAMILY SSF50129 2 145 2.59E-44 T 23-04-2016 IPR011032 GroES-like VV93_RS00080 35068cb158c732d1d07b72b3048e89a6 326 Gene3D G3DSA:3.40.50.720 140 292 1.6E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS00080 35068cb158c732d1d07b72b3048e89a6 326 PANTHER PTHR11695 16 326 1.3E-160 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 VV93_RS00080 35068cb158c732d1d07b72b3048e89a6 326 PANTHER PTHR11695:SF13 16 326 1.3E-160 T 23-04-2016 IPR014188 Acrylyl-CoA reductase AcuI VV93_RS00080 35068cb158c732d1d07b72b3048e89a6 326 SUPERFAMILY SSF51735 116 289 1.14E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 410 565 8.8E-34 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 2.1E-8 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 331 381 5.0E-15 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 Gene3D G3DSA:3.40.50.300 400 565 9.5E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 Pfam PF00009 Elongation factor Tu GTP binding domain 410 567 5.1E-33 T 23-04-2016 VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 PANTHER PTHR23115 759 907 1.3E-212 T 23-04-2016 VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 PANTHER PTHR23115 384 734 1.3E-212 T 23-04-2016 VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 Pfam PF11987 Translation-initiation factor 2 691 796 8.2E-37 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 SUPERFAMILY SSF46955 3 50 1.43E-12 T 23-04-2016 IPR009061 Putative DNA-binding domain VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 SUPERFAMILY SSF50447 579 661 3.12E-24 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 1.1E-15 T 23-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 Gene3D G3DSA:3.40.50.10050 706 785 2.2E-25 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 324 906 1.1E-285 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 Gene3D G3DSA:2.40.30.10 579 670 1.2E-22 T 23-04-2016 VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 904 17.694 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 SUPERFAMILY SSF50447 808 904 2.55E-34 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 SUPERFAMILY SSF52156 684 813 1.83E-38 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 Gene3D G3DSA:2.40.30.10 808 905 7.3E-40 T 23-04-2016 VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 PANTHER PTHR23115:SF184 759 907 1.3E-212 T 23-04-2016 VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 PANTHER PTHR23115:SF184 384 734 1.3E-212 T 23-04-2016 VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 ProSitePatterns PS01176 Initiation factor 2 signature. 857 879 - T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 SUPERFAMILY SSF52540 400 573 4.29E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12220 06e6fb9f07f0441b51436bc7878862b3 907 Gene3D G3DSA:3.30.56.50 2 50 1.3E-22 T 23-04-2016 VV93_RS05555 5b4ef0fe3fd8dcd7b9592bd02fb6f3b4 155 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 2 151 6.9E-36 T 23-04-2016 IPR004375 YhcH/YjgK/YiaL family VV93_RS05555 5b4ef0fe3fd8dcd7b9592bd02fb6f3b4 155 SUPERFAMILY SSF51197 3 151 7.14E-38 T 23-04-2016 VV93_RS05555 5b4ef0fe3fd8dcd7b9592bd02fb6f3b4 155 Pfam PF04074 Domain of unknown function (DUF386) 4 150 3.1E-37 T 23-04-2016 IPR004375 YhcH/YjgK/YiaL family VV93_RS05555 5b4ef0fe3fd8dcd7b9592bd02fb6f3b4 155 Gene3D G3DSA:2.60.120.370 3 151 3.8E-40 T 23-04-2016 IPR004375 YhcH/YjgK/YiaL family VV93_RS05555 5b4ef0fe3fd8dcd7b9592bd02fb6f3b4 155 PANTHER PTHR34986:SF1 2 151 1.7E-55 T 23-04-2016 VV93_RS05555 5b4ef0fe3fd8dcd7b9592bd02fb6f3b4 155 PANTHER PTHR34986 2 151 1.7E-55 T 23-04-2016 VV93_RS13080 8a659b7eca7e9d2000eebaacf71e6fdb 389 PANTHER PTHR13932 5 389 5.1E-217 T 23-04-2016 VV93_RS13080 8a659b7eca7e9d2000eebaacf71e6fdb 389 PANTHER PTHR13932:SF7 5 389 5.1E-217 T 23-04-2016 VV93_RS13080 8a659b7eca7e9d2000eebaacf71e6fdb 389 Pfam PF06969 HemN C-terminal domain 314 374 3.2E-6 T 23-04-2016 IPR010723 HemN, C-terminal VV93_RS13080 8a659b7eca7e9d2000eebaacf71e6fdb 389 Pfam PF04055 Radical SAM superfamily 11 181 2.9E-18 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VV93_RS13080 8a659b7eca7e9d2000eebaacf71e6fdb 389 SUPERFAMILY SSF102114 4 386 1.96E-109 T 23-04-2016 VV93_RS13080 8a659b7eca7e9d2000eebaacf71e6fdb 389 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 2.0E-135 T 23-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- VV93_RS13080 8a659b7eca7e9d2000eebaacf71e6fdb 389 SMART SM00729 6 227 8.1E-56 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VV93_RS13080 8a659b7eca7e9d2000eebaacf71e6fdb 389 Gene3D G3DSA:3.80.30.20 7 242 7.8E-30 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VV93_RS13480 b85dffe44deb41990245771c4d8f0730 162 PANTHER PTHR37484 1 162 4.6E-65 T 23-04-2016 VV93_RS13480 b85dffe44deb41990245771c4d8f0730 162 Pfam PF04093 rod shape-determining protein MreD 9 154 1.0E-39 T 23-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VV93_RS13480 b85dffe44deb41990245771c4d8f0730 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 10 154 9.5E-38 T 23-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VV93_RS13480 b85dffe44deb41990245771c4d8f0730 162 PIRSF PIRSF018472 1 162 1.2E-41 T 23-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type VV93_RS13485 1d14f57a348d50bb2b62e434a0853612 296 PANTHER PTHR34138 1 275 7.4E-84 T 23-04-2016 VV93_RS13485 1d14f57a348d50bb2b62e434a0853612 296 PIRSF PIRSF038471 2 283 2.0E-80 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 VV93_RS13485 1d14f57a348d50bb2b62e434a0853612 296 PANTHER PTHR34138:SF1 1 275 7.4E-84 T 23-04-2016 VV93_RS13485 1d14f57a348d50bb2b62e434a0853612 296 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 274 4.7E-89 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 VV93_RS13485 1d14f57a348d50bb2b62e434a0853612 296 Pfam PF04085 rod shape-determining protein MreC 123 269 1.1E-38 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 VV93_RS11995 e9e5e3a23801199aa57d916ad36405c7 448 Gene3D G3DSA:3.40.50.300 151 292 6.9E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11995 e9e5e3a23801199aa57d916ad36405c7 448 Gene3D G3DSA:3.40.50.300 324 375 6.9E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11995 e9e5e3a23801199aa57d916ad36405c7 448 SUPERFAMILY SSF52540 152 198 1.25E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11995 e9e5e3a23801199aa57d916ad36405c7 448 SUPERFAMILY SSF52540 249 436 1.25E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08065 3e8248784590db7f0cc6f5bfc73bf9a8 406 Pfam PF00909 Ammonium Transporter Family 23 399 4.0E-88 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VV93_RS08065 3e8248784590db7f0cc6f5bfc73bf9a8 406 PANTHER PTHR11730:SF6 4 401 9.5E-118 T 23-04-2016 VV93_RS08065 3e8248784590db7f0cc6f5bfc73bf9a8 406 PANTHER PTHR11730 4 401 9.5E-118 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 VV93_RS08065 3e8248784590db7f0cc6f5bfc73bf9a8 406 SUPERFAMILY SSF111352 17 384 3.92E-96 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VV93_RS08065 3e8248784590db7f0cc6f5bfc73bf9a8 406 ProSitePatterns PS01219 Ammonium transporters signature. 167 192 - T 23-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VV93_RS08065 3e8248784590db7f0cc6f5bfc73bf9a8 406 Gene3D G3DSA:1.10.3430.10 15 384 1.6E-95 T 23-04-2016 IPR029020 Ammonium/urea transporter VV93_RS05495 fcb0eac667fa71c4ef3bac99f2d3780e 337 PANTHER PTHR11707 1 336 1.0E-249 T 23-04-2016 VV93_RS05495 fcb0eac667fa71c4ef3bac99f2d3780e 337 Pfam PF00710 Asparaginase, N-terminal 5 191 7.5E-67 T 23-04-2016 IPR027474 L-asparaginase, N-terminal VV93_RS05495 fcb0eac667fa71c4ef3bac99f2d3780e 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VV93_RS05495 fcb0eac667fa71c4ef3bac99f2d3780e 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VV93_RS05495 fcb0eac667fa71c4ef3bac99f2d3780e 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VV93_RS05495 fcb0eac667fa71c4ef3bac99f2d3780e 337 PIRSF PIRSF500176 2 333 3.5E-109 T 23-04-2016 VV93_RS05495 fcb0eac667fa71c4ef3bac99f2d3780e 337 SMART SM00870 5 324 1.8E-139 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VV93_RS05495 fcb0eac667fa71c4ef3bac99f2d3780e 337 Gene3D G3DSA:3.40.50.1170 4 206 2.8E-80 T 23-04-2016 IPR027474 L-asparaginase, N-terminal VV93_RS05495 fcb0eac667fa71c4ef3bac99f2d3780e 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 2.2E-118 T 23-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 VV93_RS05495 fcb0eac667fa71c4ef3bac99f2d3780e 337 Gene3D G3DSA:3.40.50.40 212 336 8.7E-49 T 23-04-2016 IPR027473 L-asparaginase, C-terminal domain VV93_RS05495 fcb0eac667fa71c4ef3bac99f2d3780e 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 23-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 VV93_RS05495 fcb0eac667fa71c4ef3bac99f2d3780e 337 SUPERFAMILY SSF53774 3 336 6.67E-114 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VV93_RS05495 fcb0eac667fa71c4ef3bac99f2d3780e 337 PANTHER PTHR11707:SF31 1 336 1.0E-249 T 23-04-2016 VV93_RS05495 fcb0eac667fa71c4ef3bac99f2d3780e 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 23-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 VV93_RS05495 fcb0eac667fa71c4ef3bac99f2d3780e 337 PIRSF PIRSF001220 1 335 2.1E-95 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VV93_RS11850 b2933908fbcd4c4e74d8c4285405b2ed 533 SUPERFAMILY SSF58104 224 533 2.35E-72 T 23-04-2016 VV93_RS11850 b2933908fbcd4c4e74d8c4285405b2ed 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 531 7.4E-44 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS11850 b2933908fbcd4c4e74d8c4285405b2ed 533 Gene3D G3DSA:1.10.287.950 286 503 6.5E-57 T 23-04-2016 VV93_RS11850 b2933908fbcd4c4e74d8c4285405b2ed 533 Pfam PF17200 Single Cache domain 2 39 180 1.4E-29 T 23-04-2016 IPR033480 Single Cache domain 2 VV93_RS11850 b2933908fbcd4c4e74d8c4285405b2ed 533 Gene3D G3DSA:3.30.450.20 24 174 2.4E-36 T 23-04-2016 VV93_RS11850 b2933908fbcd4c4e74d8c4285405b2ed 533 PANTHER PTHR32089:SF64 77 533 2.1E-147 T 23-04-2016 VV93_RS11850 b2933908fbcd4c4e74d8c4285405b2ed 533 SMART SM01049 36 123 1.9E-21 T 23-04-2016 IPR033480 Single Cache domain 2 VV93_RS11850 b2933908fbcd4c4e74d8c4285405b2ed 533 SMART SM00283 271 532 1.7E-68 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS11850 b2933908fbcd4c4e74d8c4285405b2ed 533 SMART SM00304 204 256 3.7E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS11850 b2933908fbcd4c4e74d8c4285405b2ed 533 SMART SM00304 257 309 57.0 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS11850 b2933908fbcd4c4e74d8c4285405b2ed 533 PANTHER PTHR32089 77 533 2.1E-147 T 23-04-2016 VV93_RS11850 b2933908fbcd4c4e74d8c4285405b2ed 533 Pfam PF00672 HAMP domain 185 252 2.4E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS13440 c3ba5928ba1669a695d3c1099e2dc008 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS13440 c3ba5928ba1669a695d3c1099e2dc008 250 PANTHER PTHR11079:SF86 8 242 1.8E-67 T 23-04-2016 VV93_RS13440 c3ba5928ba1669a695d3c1099e2dc008 250 PANTHER PTHR11079 8 242 1.8E-67 T 23-04-2016 VV93_RS13440 c3ba5928ba1669a695d3c1099e2dc008 250 Pfam PF00849 RNA pseudouridylate synthase 22 174 1.5E-29 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS13440 c3ba5928ba1669a695d3c1099e2dc008 250 SUPERFAMILY SSF55120 7 221 1.92E-62 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS08670 070ac683e597a207494e9cfb26acddbf 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-22 T 23-04-2016 VV93_RS08670 070ac683e597a207494e9cfb26acddbf 117 Pfam PF00453 Ribosomal protein L20 3 108 7.8E-49 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VV93_RS08670 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VV93_RS08670 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VV93_RS08670 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VV93_RS08670 070ac683e597a207494e9cfb26acddbf 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.5E-52 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VV93_RS08670 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.1900.20 55 117 1.1E-30 T 23-04-2016 VV93_RS08670 070ac683e597a207494e9cfb26acddbf 117 PANTHER PTHR10986 2 117 9.2E-67 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VV93_RS08670 070ac683e597a207494e9cfb26acddbf 117 SUPERFAMILY SSF74731 2 116 5.62E-50 T 23-04-2016 VV93_RS08670 070ac683e597a207494e9cfb26acddbf 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VV93_RS08670 070ac683e597a207494e9cfb26acddbf 117 PANTHER PTHR10986:SF12 2 117 9.2E-67 T 23-04-2016 VV93_RS08670 070ac683e597a207494e9cfb26acddbf 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.596 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VV93_RS14875 d5288a1aa4178f75531a87f21cfc276c 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 3.8E-22 T 23-04-2016 IPR018740 Protein of unknown function DUF2282, integral membrane VV93_RS15580 f332864f1a6eb7aff2b839b9fd68296a 339 PANTHER PTHR32063:SF28 1 339 1.7E-199 T 23-04-2016 VV93_RS15580 f332864f1a6eb7aff2b839b9fd68296a 339 SUPERFAMILY SSF82693 254 303 4.18E-5 T 23-04-2016 VV93_RS15580 f332864f1a6eb7aff2b839b9fd68296a 339 Gene3D G3DSA:3.30.2090.10 305 338 7.9E-5 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS15580 f332864f1a6eb7aff2b839b9fd68296a 339 PRINTS PR00702 Acriflavin resistance protein family signature 207 221 3.3E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS15580 f332864f1a6eb7aff2b839b9fd68296a 339 PRINTS PR00702 Acriflavin resistance protein family signature 41 64 3.3E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS15580 f332864f1a6eb7aff2b839b9fd68296a 339 PRINTS PR00702 Acriflavin resistance protein family signature 144 161 3.3E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS15580 f332864f1a6eb7aff2b839b9fd68296a 339 PRINTS PR00702 Acriflavin resistance protein family signature 66 89 3.3E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS15580 f332864f1a6eb7aff2b839b9fd68296a 339 SUPERFAMILY SSF82866 1 93 6.15E-22 T 23-04-2016 VV93_RS15580 f332864f1a6eb7aff2b839b9fd68296a 339 Gene3D G3DSA:3.30.70.1430 159 254 4.9E-17 T 23-04-2016 VV93_RS15580 f332864f1a6eb7aff2b839b9fd68296a 339 Gene3D G3DSA:1.20.1640.10 1 104 3.7E-26 T 23-04-2016 VV93_RS15580 f332864f1a6eb7aff2b839b9fd68296a 339 Pfam PF00873 AcrB/AcrD/AcrF family 1 338 4.7E-74 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS15580 f332864f1a6eb7aff2b839b9fd68296a 339 SUPERFAMILY SSF82693 157 254 2.25E-22 T 23-04-2016 VV93_RS15580 f332864f1a6eb7aff2b839b9fd68296a 339 PANTHER PTHR32063 1 339 1.7E-199 T 23-04-2016 VV93_RS01695 02db853e0a872b6d504c4cc694cd97c0 340 Gene3D G3DSA:3.40.50.720 15 196 1.3E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01695 02db853e0a872b6d504c4cc694cd97c0 340 PANTHER PTHR10366:SF472 17 339 1.1E-142 T 23-04-2016 VV93_RS01695 02db853e0a872b6d504c4cc694cd97c0 340 PANTHER PTHR10366 17 339 1.1E-142 T 23-04-2016 VV93_RS01695 02db853e0a872b6d504c4cc694cd97c0 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 19 330 3.2E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01695 02db853e0a872b6d504c4cc694cd97c0 340 SUPERFAMILY SSF51735 1 338 5.85E-84 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01695 02db853e0a872b6d504c4cc694cd97c0 340 Gene3D G3DSA:3.90.25.10 197 324 4.2E-32 T 23-04-2016 VV93_RS01780 941614f5a0dec86d7314a077daf3d729 99 Pfam PF01541 GIY-YIG catalytic domain 5 77 4.4E-13 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily VV93_RS01780 941614f5a0dec86d7314a077daf3d729 99 SUPERFAMILY SSF82771 3 89 1.19E-19 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily VV93_RS01780 941614f5a0dec86d7314a077daf3d729 99 PANTHER PTHR34477 6 94 6.2E-42 T 23-04-2016 VV93_RS01780 941614f5a0dec86d7314a077daf3d729 99 PANTHER PTHR34477:SF2 6 94 6.2E-42 T 23-04-2016 VV93_RS09390 8a182cf7db45426b400599951f5a8a36 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 5.1E-228 T 23-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 VV93_RS09390 8a182cf7db45426b400599951f5a8a36 453 Gene3D G3DSA:3.30.1330.90 10 157 5.2E-53 T 23-04-2016 IPR029009 Allosteric substrate binding domain VV93_RS09390 8a182cf7db45426b400599951f5a8a36 453 PANTHER PTHR30182:SF5 1 453 0.0 T 23-04-2016 VV93_RS09390 8a182cf7db45426b400599951f5a8a36 453 Pfam PF03315 Serine dehydratase beta chain 3 155 2.3E-54 T 23-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 VV93_RS09390 8a182cf7db45426b400599951f5a8a36 453 Pfam PF03313 Serine dehydratase alpha chain 183 448 3.5E-99 T 23-04-2016 IPR005130 Serine dehydratase-like, alpha subunit VV93_RS09390 8a182cf7db45426b400599951f5a8a36 453 PANTHER PTHR30182 1 453 0.0 T 23-04-2016 VV93_RS09390 8a182cf7db45426b400599951f5a8a36 453 SUPERFAMILY SSF143548 16 157 1.96E-44 T 23-04-2016 IPR029009 Allosteric substrate binding domain VV93_RS05335 150c3857b30a0bdf9a151cecd386e837 497 Gene3D G3DSA:3.40.50.980 190 333 9.1E-28 T 23-04-2016 VV93_RS05335 150c3857b30a0bdf9a151cecd386e837 497 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 56 488 2.9E-128 T 23-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VV93_RS05335 150c3857b30a0bdf9a151cecd386e837 497 Gene3D G3DSA:3.30.300.30 395 489 1.4E-17 T 23-04-2016 VV93_RS05335 150c3857b30a0bdf9a151cecd386e837 497 Gene3D G3DSA:3.40.50.980 33 189 2.9E-25 T 23-04-2016 VV93_RS05335 150c3857b30a0bdf9a151cecd386e837 497 PANTHER PTHR24096 1 489 4.0E-140 T 23-04-2016 VV93_RS05335 150c3857b30a0bdf9a151cecd386e837 497 Pfam PF00501 AMP-binding enzyme 37 400 2.8E-52 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VV93_RS05335 150c3857b30a0bdf9a151cecd386e837 497 PANTHER PTHR24096:SF109 1 489 4.0E-140 T 23-04-2016 VV93_RS05335 150c3857b30a0bdf9a151cecd386e837 497 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 23-04-2016 IPR020845 AMP-binding, conserved site VV93_RS05335 150c3857b30a0bdf9a151cecd386e837 497 SUPERFAMILY SSF56801 33 492 1.31E-82 T 23-04-2016 VV93_RS05335 150c3857b30a0bdf9a151cecd386e837 497 Gene3D G3DSA:2.30.38.10 348 394 5.8E-4 T 23-04-2016 VV93_RS04885 6952b8538c1568528d53027f813e4498 130 Gene3D G3DSA:1.20.1300.10 6 130 2.1E-41 T 23-04-2016 VV93_RS04885 6952b8538c1568528d53027f813e4498 130 PANTHER PTHR10978:SF4 6 130 6.1E-74 T 23-04-2016 VV93_RS04885 6952b8538c1568528d53027f813e4498 130 PANTHER PTHR10978 6 130 6.1E-74 T 23-04-2016 VV93_RS04885 6952b8538c1568528d53027f813e4498 130 SUPERFAMILY SSF81343 8 130 1.16E-34 T 23-04-2016 VV93_RS04885 6952b8538c1568528d53027f813e4498 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 23-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 VV93_RS04885 6952b8538c1568528d53027f813e4498 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 1.2E-39 T 23-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 VV93_RS04885 6952b8538c1568528d53027f813e4498 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 23-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 VV93_RS04885 6952b8538c1568528d53027f813e4498 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 1.1E-28 T 23-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 VV93_RS04885 6952b8538c1568528d53027f813e4498 130 PIRSF PIRSF000178 2 130 7.9E-33 T 23-04-2016 VV93_RS10015 d34d8a794ec8586f2fda45a771d571d5 185 Pfam PF06693 Protein of unknown function (DUF1190) 38 181 3.4E-24 T 23-04-2016 IPR009576 Biofilm formation YgiB VV93_RS12635 f48eeee116ca036f99619a454e45f779 521 PANTHER PTHR38761 1 521 3.7E-261 T 23-04-2016 VV93_RS12635 f48eeee116ca036f99619a454e45f779 521 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 7 516 1.3E-206 T 23-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 VV93_RS12635 f48eeee116ca036f99619a454e45f779 521 Pfam PF04262 Glutamate-cysteine ligase 14 378 3.2E-168 T 23-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 VV93_RS12635 f48eeee116ca036f99619a454e45f779 521 SUPERFAMILY SSF55931 8 514 1.5E-199 T 23-04-2016 VV93_RS12635 f48eeee116ca036f99619a454e45f779 521 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 521 221.134 T 23-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 VV93_RS13610 aaf918d6c3377b13a5a68ab17d85b49a 449 Gene3D G3DSA:3.40.1160.10 107 294 6.0E-60 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS13610 aaf918d6c3377b13a5a68ab17d85b49a 449 Gene3D G3DSA:3.40.1160.10 5 53 6.0E-60 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS13610 aaf918d6c3377b13a5a68ab17d85b49a 449 SUPERFAMILY SSF55021 377 448 6.3E-13 T 23-04-2016 VV93_RS13610 aaf918d6c3377b13a5a68ab17d85b49a 449 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 4 448 4.5E-124 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS13610 aaf918d6c3377b13a5a68ab17d85b49a 449 PANTHER PTHR21499 6 448 1.7E-146 T 23-04-2016 VV93_RS13610 aaf918d6c3377b13a5a68ab17d85b49a 449 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 4 448 3.7E-124 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS13610 aaf918d6c3377b13a5a68ab17d85b49a 449 PANTHER PTHR21499:SF3 6 448 1.7E-146 T 23-04-2016 VV93_RS13610 aaf918d6c3377b13a5a68ab17d85b49a 449 PIRSF PIRSF000726 2 449 5.8E-130 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS13610 aaf918d6c3377b13a5a68ab17d85b49a 449 SUPERFAMILY SSF55021 297 394 3.08E-20 T 23-04-2016 VV93_RS13610 aaf918d6c3377b13a5a68ab17d85b49a 449 SUPERFAMILY SSF53633 5 293 1.18E-76 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS13610 aaf918d6c3377b13a5a68ab17d85b49a 449 Pfam PF00696 Amino acid kinase family 5 278 1.1E-47 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS13610 aaf918d6c3377b13a5a68ab17d85b49a 449 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS01805 76a5f640560395c958b798b6cd70a827 200 SUPERFAMILY SSF52166 10 199 3.53E-73 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 VV93_RS01805 76a5f640560395c958b798b6cd70a827 200 PANTHER PTHR10746 10 199 1.1E-92 T 23-04-2016 IPR013005 50S ribosomal protein uL4 VV93_RS01805 76a5f640560395c958b798b6cd70a827 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 7.9E-76 T 23-04-2016 IPR013005 50S ribosomal protein uL4 VV93_RS01805 76a5f640560395c958b798b6cd70a827 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 4.4E-65 T 23-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 VV93_RS01805 76a5f640560395c958b798b6cd70a827 200 Gene3D G3DSA:3.40.1370.10 52 200 4.9E-59 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 VV93_RS01805 76a5f640560395c958b798b6cd70a827 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 200 33.821 T 23-04-2016 IPR013005 50S ribosomal protein uL4 VV93_RS05110 4e2e65a54ddb5d2bacfcbddf44c6b793 148 Pfam PF13279 Thioesterase-like superfamily 18 118 2.9E-12 T 23-04-2016 VV93_RS05110 4e2e65a54ddb5d2bacfcbddf44c6b793 148 SUPERFAMILY SSF54637 9 145 3.28E-30 T 23-04-2016 IPR029069 HotDog domain VV93_RS05110 4e2e65a54ddb5d2bacfcbddf44c6b793 148 Gene3D G3DSA:3.10.129.10 12 135 8.3E-35 T 23-04-2016 IPR029069 HotDog domain VV93_RS05110 4e2e65a54ddb5d2bacfcbddf44c6b793 148 PANTHER PTHR31793:SF9 18 143 3.6E-27 T 23-04-2016 VV93_RS05110 4e2e65a54ddb5d2bacfcbddf44c6b793 148 PANTHER PTHR31793 18 143 3.6E-27 T 23-04-2016 VV93_RS14345 10f5ffd3b985c536652d967408ce9ae2 273 SUPERFAMILY SSF51161 8 258 5.24E-63 T 23-04-2016 IPR011004 Trimeric LpxA-like VV93_RS14345 10f5ffd3b985c536652d967408ce9ae2 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.0E-74 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 VV93_RS14345 10f5ffd3b985c536652d967408ce9ae2 273 PANTHER PTHR23416:SF2 5 259 1.2E-151 T 23-04-2016 VV93_RS14345 10f5ffd3b985c536652d967408ce9ae2 273 PANTHER PTHR23416 5 259 1.2E-151 T 23-04-2016 VV93_RS14345 10f5ffd3b985c536652d967408ce9ae2 273 Gene3D G3DSA:2.160.10.10 143 250 9.1E-32 T 23-04-2016 VV93_RS14345 10f5ffd3b985c536652d967408ce9ae2 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VV93_RS14345 10f5ffd3b985c536652d967408ce9ae2 273 Gene3D G3DSA:1.10.3130.10 7 142 1.9E-46 T 23-04-2016 VV93_RS14345 10f5ffd3b985c536652d967408ce9ae2 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.5E-9 T 23-04-2016 IPR001451 Hexapeptide repeat VV93_RS14345 10f5ffd3b985c536652d967408ce9ae2 273 SMART SM00971 9 113 4.4E-58 T 23-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 VV93_RS14345 10f5ffd3b985c536652d967408ce9ae2 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 1.4E-37 T 23-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 VV93_RS12870 07314a9d2712ad01f4f3f5a320f88053 325 Pfam PF03888 MucB/RseB N-terminal domain 26 195 1.9E-57 T 23-04-2016 IPR033434 MucB/RseB, N-terminal VV93_RS12870 07314a9d2712ad01f4f3f5a320f88053 325 PIRSF PIRSF005427 1 318 1.9E-81 T 23-04-2016 IPR005588 MucB/RseB VV93_RS12870 07314a9d2712ad01f4f3f5a320f88053 325 Pfam PF17188 MucB/RseB C-terminal domain 217 311 2.4E-27 T 23-04-2016 IPR033436 MucB/RseB, C-terminal VV93_RS12870 07314a9d2712ad01f4f3f5a320f88053 325 PANTHER PTHR38782 2 317 8.2E-115 T 23-04-2016 VV93_RS12870 07314a9d2712ad01f4f3f5a320f88053 325 PANTHER PTHR38782:SF1 2 317 8.2E-115 T 23-04-2016 VV93_RS12870 07314a9d2712ad01f4f3f5a320f88053 325 Gene3D G3DSA:2.50.20.10 123 188 8.8E-9 T 23-04-2016 VV93_RS03145 6d9e403619ad65700271f2e31beabc4a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 7.1E-16 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV93_RS03145 6d9e403619ad65700271f2e31beabc4a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 7.1E-16 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV93_RS03145 6d9e403619ad65700271f2e31beabc4a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 7.1E-16 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV93_RS03145 6d9e403619ad65700271f2e31beabc4a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 7.1E-16 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV93_RS03145 6d9e403619ad65700271f2e31beabc4a 98 SMART SM00418 15 93 3.4E-30 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV93_RS03145 6d9e403619ad65700271f2e31beabc4a 98 PANTHER PTHR33154 1 96 2.3E-30 T 23-04-2016 VV93_RS03145 6d9e403619ad65700271f2e31beabc4a 98 Gene3D G3DSA:1.10.10.10 2 98 4.5E-39 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS03145 6d9e403619ad65700271f2e31beabc4a 98 PANTHER PTHR33154:SF10 1 96 2.3E-30 T 23-04-2016 VV93_RS03145 6d9e403619ad65700271f2e31beabc4a 98 SUPERFAMILY SSF46785 9 96 6.02E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS03145 6d9e403619ad65700271f2e31beabc4a 98 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 8.2E-18 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV93_RS00065 fd5809ea035b81c4a67ab944f8cd504c 81 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 28.815 T 23-04-2016 IPR022931 Sulphurtransferase TusA GO:0016783 VV93_RS00065 fd5809ea035b81c4a67ab944f8cd504c 81 PANTHER PTHR33279 1 80 1.6E-50 T 23-04-2016 VV93_RS00065 fd5809ea035b81c4a67ab944f8cd504c 81 SUPERFAMILY SSF64307 9 80 1.29E-24 T 23-04-2016 IPR001455 TusA-like domain VV93_RS00065 fd5809ea035b81c4a67ab944f8cd504c 81 Gene3D G3DSA:3.30.110.40 8 80 1.2E-28 T 23-04-2016 IPR001455 TusA-like domain VV93_RS00065 fd5809ea035b81c4a67ab944f8cd504c 81 Pfam PF01206 Sulfurtransferase TusA 10 79 9.8E-23 T 23-04-2016 IPR001455 TusA-like domain VV93_RS00065 fd5809ea035b81c4a67ab944f8cd504c 81 PANTHER PTHR33279:SF5 1 80 1.6E-50 T 23-04-2016 VV93_RS00065 fd5809ea035b81c4a67ab944f8cd504c 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 23-04-2016 IPR001455 TusA-like domain VV93_RS11885 b927596f89112e046bee45216f90c5fc 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 7.4E-141 T 23-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 VV93_RS11885 b927596f89112e046bee45216f90c5fc 339 Gene3D G3DSA:3.90.25.10 264 337 1.4E-55 T 23-04-2016 VV93_RS11885 b927596f89112e046bee45216f90c5fc 339 Gene3D G3DSA:3.90.25.10 180 232 1.4E-55 T 23-04-2016 VV93_RS11885 b927596f89112e046bee45216f90c5fc 339 PANTHER PTHR10366:SF39 2 338 8.9E-157 T 23-04-2016 VV93_RS11885 b927596f89112e046bee45216f90c5fc 339 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 9.5E-6 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VV93_RS11885 b927596f89112e046bee45216f90c5fc 339 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 9.5E-6 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VV93_RS11885 b927596f89112e046bee45216f90c5fc 339 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 9.5E-6 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VV93_RS11885 b927596f89112e046bee45216f90c5fc 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 1.5E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS11885 b927596f89112e046bee45216f90c5fc 339 SUPERFAMILY SSF51735 2 336 6.05E-98 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS11885 b927596f89112e046bee45216f90c5fc 339 Gene3D G3DSA:3.40.50.720 2 179 2.1E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS11885 b927596f89112e046bee45216f90c5fc 339 PANTHER PTHR10366 2 338 8.9E-157 T 23-04-2016 VV93_RS10295 f8ef80bae74ffa942fa596b6122f6481 741 PIRSF PIRSF009407 1 741 0.0 T 23-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VV93_RS10295 f8ef80bae74ffa942fa596b6122f6481 741 SUPERFAMILY SSF53659 5 740 0.0 T 23-04-2016 VV93_RS10295 f8ef80bae74ffa942fa596b6122f6481 741 Gene3D G3DSA:3.40.718.10 341 364 2.9E-35 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VV93_RS10295 f8ef80bae74ffa942fa596b6122f6481 741 Gene3D G3DSA:3.40.718.10 540 646 2.9E-35 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VV93_RS10295 f8ef80bae74ffa942fa596b6122f6481 741 Gene3D G3DSA:3.40.718.10 188 289 2.9E-35 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VV93_RS10295 f8ef80bae74ffa942fa596b6122f6481 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 23-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VV93_RS10295 f8ef80bae74ffa942fa596b6122f6481 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 741 0.0 T 23-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VV93_RS10295 f8ef80bae74ffa942fa596b6122f6481 741 PANTHER PTHR36999 2 741 0.0 T 23-04-2016 VV93_RS08475 4493f7866903a03d3882c14579b516c1 219 SUPERFAMILY SSF56854 93 185 9.87E-5 T 23-04-2016 VV93_RS06590 032b8123a60733bba4755a92114feddb 394 PANTHER PTHR30333:SF1 1 394 1.8E-263 T 23-04-2016 VV93_RS06590 032b8123a60733bba4755a92114feddb 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 186 2.0E-71 T 23-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal VV93_RS06590 032b8123a60733bba4755a92114feddb 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 5.9E-189 T 23-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VV93_RS06590 032b8123a60733bba4755a92114feddb 394 Gene3D G3DSA:1.10.3820.10 15 189 1.7E-28 T 23-04-2016 VV93_RS06590 032b8123a60733bba4755a92114feddb 394 Gene3D G3DSA:1.10.3820.10 339 345 1.7E-28 T 23-04-2016 VV93_RS06590 032b8123a60733bba4755a92114feddb 394 PIRSF PIRSF000014 1 394 3.4E-162 T 23-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VV93_RS06590 032b8123a60733bba4755a92114feddb 394 PANTHER PTHR30333 1 394 1.8E-263 T 23-04-2016 VV93_RS06590 032b8123a60733bba4755a92114feddb 394 SUPERFAMILY SSF48695 13 187 9.53E-61 T 23-04-2016 IPR011031 Multihaem cytochrome VV93_RS00615 3de18181796c5cbdc71467b3817ee58d 270 SUPERFAMILY SSF53335 17 252 5.07E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00615 3de18181796c5cbdc71467b3817ee58d 270 PIRSF PIRSF028177 3 270 4.0E-66 T 23-04-2016 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00174 VV93_RS00615 3de18181796c5cbdc71467b3817ee58d 270 Pfam PF04072 Leucine carboxyl methyltransferase 72 226 2.5E-7 T 23-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VV93_RS00615 3de18181796c5cbdc71467b3817ee58d 270 Gene3D G3DSA:3.40.50.150 20 198 5.4E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00615 3de18181796c5cbdc71467b3817ee58d 270 PANTHER PTHR13600 18 190 6.1E-43 T 23-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VV93_RS00615 3de18181796c5cbdc71467b3817ee58d 270 PANTHER PTHR13600:SF19 18 190 6.1E-43 T 23-04-2016 VV93_RS05790 f1a5191c86482130ef5fbb019a6b651d 316 Gene3D G3DSA:3.40.30.10 30 167 3.6E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS05790 f1a5191c86482130ef5fbb019a6b651d 316 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 1.4E-22 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VV93_RS05790 f1a5191c86482130ef5fbb019a6b651d 316 Gene3D G3DSA:1.20.1050.10 168 276 4.0E-28 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VV93_RS05790 f1a5191c86482130ef5fbb019a6b651d 316 PANTHER PTHR32419:SF6 1 315 1.3E-173 T 23-04-2016 VV93_RS05790 f1a5191c86482130ef5fbb019a6b651d 316 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 263 2.3E-13 T 23-04-2016 VV93_RS05790 f1a5191c86482130ef5fbb019a6b651d 316 SUPERFAMILY SSF47616 163 312 1.81E-36 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VV93_RS05790 f1a5191c86482130ef5fbb019a6b651d 316 PIRSF PIRSF015753 5 312 3.8E-136 T 23-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 VV93_RS05790 f1a5191c86482130ef5fbb019a6b651d 316 PANTHER PTHR32419 1 315 1.3E-173 T 23-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 VV93_RS05790 f1a5191c86482130ef5fbb019a6b651d 316 SUPERFAMILY SSF52833 31 150 2.41E-17 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS05205 8dd2d08057b1d9f3960f023716a56447 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 294 1.1E-12 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS05205 8dd2d08057b1d9f3960f023716a56447 307 PANTHER PTHR30193:SF29 1 306 7.3E-129 T 23-04-2016 VV93_RS05205 8dd2d08057b1d9f3960f023716a56447 307 SUPERFAMILY SSF161098 68 294 2.35E-47 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS05205 8dd2d08057b1d9f3960f023716a56447 307 PANTHER PTHR30193 1 306 7.3E-129 T 23-04-2016 VV93_RS05205 8dd2d08057b1d9f3960f023716a56447 307 Gene3D G3DSA:1.10.3720.10 74 299 1.3E-52 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS10750 bce8bf003a22164c97c42cd51150915f 421 SUPERFAMILY SSF53623 15 285 2.88E-84 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS10750 bce8bf003a22164c97c42cd51150915f 421 PIRSF PIRSF001563 6 421 8.6E-105 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 VV93_RS10750 bce8bf003a22164c97c42cd51150915f 421 SUPERFAMILY SSF53244 287 415 6.56E-33 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VV93_RS10750 bce8bf003a22164c97c42cd51150915f 421 TIGRFAM TIGR01499 folC: bifunctional protein FolC 33 414 1.1E-104 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 VV93_RS10750 bce8bf003a22164c97c42cd51150915f 421 Pfam PF08245 Mur ligase middle domain 54 192 1.2E-6 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS10750 bce8bf003a22164c97c42cd51150915f 421 Gene3D G3DSA:3.40.1190.10 14 286 1.5E-85 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS10750 bce8bf003a22164c97c42cd51150915f 421 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 338 7.0E-7 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VV93_RS10750 bce8bf003a22164c97c42cd51150915f 421 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 23-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 VV93_RS10750 bce8bf003a22164c97c42cd51150915f 421 Gene3D G3DSA:3.90.190.20 288 417 7.7E-44 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VV93_RS10750 bce8bf003a22164c97c42cd51150915f 421 PANTHER PTHR11136 8 419 2.5E-127 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 VV93_RS10750 bce8bf003a22164c97c42cd51150915f 421 PANTHER PTHR11136:SF0 8 419 2.5E-127 T 23-04-2016 VV93_RS01150 11f0cc8fedfbcd10aa010c51c3ec291f 239 Pfam PF00072 Response regulator receiver domain 7 117 1.1E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS01150 11f0cc8fedfbcd10aa010c51c3ec291f 239 SMART SM00862 156 232 8.3E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS01150 11f0cc8fedfbcd10aa010c51c3ec291f 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.4E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS01150 11f0cc8fedfbcd10aa010c51c3ec291f 239 PANTHER PTHR26402 5 235 2.5E-114 T 23-04-2016 VV93_RS01150 11f0cc8fedfbcd10aa010c51c3ec291f 239 SUPERFAMILY SSF46894 132 234 1.47E-26 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV93_RS01150 11f0cc8fedfbcd10aa010c51c3ec291f 239 Gene3D G3DSA:1.10.10.10 133 235 2.9E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS01150 11f0cc8fedfbcd10aa010c51c3ec291f 239 SMART SM00448 5 116 6.1E-45 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS01150 11f0cc8fedfbcd10aa010c51c3ec291f 239 SUPERFAMILY SSF52172 3 126 4.41E-42 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS01150 11f0cc8fedfbcd10aa010c51c3ec291f 239 Gene3D G3DSA:3.40.50.2300 2 124 9.3E-42 T 23-04-2016 VV93_RS01150 11f0cc8fedfbcd10aa010c51c3ec291f 239 PANTHER PTHR26402:SF292 5 235 2.5E-114 T 23-04-2016 VV93_RS01920 cfb35c2928f81406c567ef4683af5262 206 Pfam PF01479 S4 domain 97 143 2.5E-18 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS01920 cfb35c2928f81406c567ef4683af5262 206 Gene3D G3DSA:3.10.290.10 102 190 2.6E-32 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS01920 cfb35c2928f81406c567ef4683af5262 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 2.8E-30 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 VV93_RS01920 cfb35c2928f81406c567ef4683af5262 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 4.6E-85 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VV93_RS01920 cfb35c2928f81406c567ef4683af5262 206 SUPERFAMILY SSF55174 3 206 1.83E-72 T 23-04-2016 VV93_RS01920 cfb35c2928f81406c567ef4683af5262 206 SMART SM01390 3 95 6.4E-50 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 VV93_RS01920 cfb35c2928f81406c567ef4683af5262 206 Gene3D G3DSA:1.10.1050.10 1 101 8.4E-41 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 VV93_RS01920 cfb35c2928f81406c567ef4683af5262 206 SMART SM00363 96 160 8.9E-20 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS01920 cfb35c2928f81406c567ef4683af5262 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 23-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 VV93_RS01920 cfb35c2928f81406c567ef4683af5262 206 PANTHER PTHR11831:SF4 1 206 4.2E-94 T 23-04-2016 VV93_RS01920 cfb35c2928f81406c567ef4683af5262 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.3 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VV93_RS01920 cfb35c2928f81406c567ef4683af5262 206 PANTHER PTHR11831 1 206 4.2E-94 T 23-04-2016 IPR022801 Ribosomal protein S4/S9 VV93_RS04540 0752662846074612c3ff241c5eb63189 141 Gene3D G3DSA:1.20.58.300 1 113 3.2E-21 T 23-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VV93_RS04540 0752662846074612c3ff241c5eb63189 141 SUPERFAMILY SSF140566 1 113 3.53E-20 T 23-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VV93_RS04540 0752662846074612c3ff241c5eb63189 141 Pfam PF05130 FlgN protein 2 131 5.3E-25 T 23-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VV93_RS13915 e70b115d5120b3fe515762a5a76f617f 734 SUPERFAMILY SSF52540 198 380 5.3E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13915 e70b115d5120b3fe515762a5a76f617f 734 SUPERFAMILY SSF52540 76 131 5.3E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13915 e70b115d5120b3fe515762a5a76f617f 734 PANTHER PTHR30580 1 734 4.5E-277 T 23-04-2016 VV93_RS13915 e70b115d5120b3fe515762a5a76f617f 734 Pfam PF00270 DEAD/DEAH box helicase 205 364 7.5E-15 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV93_RS13915 e70b115d5120b3fe515762a5a76f617f 734 Gene3D G3DSA:3.40.50.300 199 381 6.2E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13915 e70b115d5120b3fe515762a5a76f617f 734 Gene3D G3DSA:3.40.50.300 460 634 1.5E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13915 e70b115d5120b3fe515762a5a76f617f 734 Pfam PF00271 Helicase conserved C-terminal domain 515 589 8.0E-8 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS13915 e70b115d5120b3fe515762a5a76f617f 734 SMART SM00490 493 590 6.5E-13 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS13915 e70b115d5120b3fe515762a5a76f617f 734 SMART SM00487 195 396 8.3E-18 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV93_RS13915 e70b115d5120b3fe515762a5a76f617f 734 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 733 25.158 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VV93_RS13915 e70b115d5120b3fe515762a5a76f617f 734 TIGRFAM TIGR00595 priA: primosomal protein N' 222 730 1.1E-190 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VV93_RS13915 e70b115d5120b3fe515762a5a76f617f 734 SUPERFAMILY SSF52540 462 633 1.15E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08640 25fce657bb9fb53d45cf66dfd8b13fe3 122 SUPERFAMILY SSF54593 3 121 6.88E-18 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS08640 25fce657bb9fb53d45cf66dfd8b13fe3 122 Gene3D G3DSA:3.10.180.10 1 120 3.8E-28 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS08640 25fce657bb9fb53d45cf66dfd8b13fe3 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 118 9.0E-7 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV93_RS08640 25fce657bb9fb53d45cf66dfd8b13fe3 122 PANTHER PTHR35006 1 122 1.2E-34 T 23-04-2016 VV93_RS10260 296ebbabe321036443ba62b9fde3e53c 153 PANTHER PTHR35603 22 153 5.9E-22 T 23-04-2016 VV93_RS10260 296ebbabe321036443ba62b9fde3e53c 153 Pfam PF05433 Glycine zipper 2TM domain 58 92 3.4E-9 T 23-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 VV93_RS09500 601ac0cba1697987097c6e0123a3381e 451 SUPERFAMILY SSF55874 322 443 3.67E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS09500 601ac0cba1697987097c6e0123a3381e 451 Pfam PF07730 Histidine kinase 250 315 3.9E-15 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VV93_RS09500 601ac0cba1697987097c6e0123a3381e 451 Gene3D G3DSA:3.30.450.20 37 184 2.0E-51 T 23-04-2016 VV93_RS09500 601ac0cba1697987097c6e0123a3381e 451 SMART SM01049 42 133 4.8E-33 T 23-04-2016 IPR033480 Single Cache domain 2 VV93_RS09500 601ac0cba1697987097c6e0123a3381e 451 Pfam PF17200 Single Cache domain 2 45 192 1.3E-44 T 23-04-2016 IPR033480 Single Cache domain 2 VV93_RS09500 601ac0cba1697987097c6e0123a3381e 451 Gene3D G3DSA:3.30.565.10 320 445 2.7E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS09500 601ac0cba1697987097c6e0123a3381e 451 SMART SM00387 353 447 6.4E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS09500 601ac0cba1697987097c6e0123a3381e 451 PIRSF PIRSF037314 1 451 9.2E-184 T 23-04-2016 IPR017171 Signal transduction histidine kinase, MctS VV93_RS09500 601ac0cba1697987097c6e0123a3381e 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 445 3.1E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS04750 251c2c30c1f937b191e75eff0f22dc52 290 SUPERFAMILY SSF46894 7 109 2.64E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV93_RS04750 251c2c30c1f937b191e75eff0f22dc52 290 Pfam PF00486 Transcriptional regulatory protein, C terminal 32 107 1.8E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS04750 251c2c30c1f937b191e75eff0f22dc52 290 Gene3D G3DSA:1.10.10.10 11 108 1.0E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS04750 251c2c30c1f937b191e75eff0f22dc52 290 PANTHER PTHR26402:SF483 9 260 2.5E-55 T 23-04-2016 VV93_RS04750 251c2c30c1f937b191e75eff0f22dc52 290 SMART SM00862 29 107 5.1E-16 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS04750 251c2c30c1f937b191e75eff0f22dc52 290 PANTHER PTHR26402 9 260 2.5E-55 T 23-04-2016 VV93_RS07250 d85b36ab1b3646decafde7af48433465 257 SMART SM01134 77 238 4.5E-58 T 23-04-2016 VV93_RS07250 d85b36ab1b3646decafde7af48433465 257 PANTHER PTHR30363 5 254 1.0E-90 T 23-04-2016 VV93_RS07250 d85b36ab1b3646decafde7af48433465 257 PANTHER PTHR30363:SF1 5 254 1.0E-90 T 23-04-2016 VV93_RS07250 d85b36ab1b3646decafde7af48433465 257 SMART SM00420 10 63 1.0E-13 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS07250 d85b36ab1b3646decafde7af48433465 257 SUPERFAMILY SSF46785 7 80 5.96E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS07250 d85b36ab1b3646decafde7af48433465 257 Pfam PF00455 DeoR C terminal sensor domain 79 237 3.1E-44 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain VV93_RS07250 d85b36ab1b3646decafde7af48433465 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 1.3E-7 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS07250 d85b36ab1b3646decafde7af48433465 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 1.3E-7 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS07250 d85b36ab1b3646decafde7af48433465 257 Pfam PF08220 DeoR-like helix-turn-helix domain 10 65 1.1E-15 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS07250 d85b36ab1b3646decafde7af48433465 257 SUPERFAMILY SSF100950 78 236 5.44E-24 T 23-04-2016 VV93_RS07250 d85b36ab1b3646decafde7af48433465 257 Gene3D G3DSA:3.30.750.70 82 157 5.6E-12 T 23-04-2016 VV93_RS07250 d85b36ab1b3646decafde7af48433465 257 Gene3D G3DSA:1.10.10.10 5 63 1.1E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS06860 eae9a96749214df5290f744346583002 220 Pfam PF11140 Protein of unknown function (DUF2913) 3 214 5.8E-85 T 23-04-2016 IPR021316 Protein of unknown function DUF2913 VV93_RS03850 4c2f73f57841a8715daa3db3336fc62b 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 23-04-2016 IPR020081 SsrA-binding protein, conserved site VV93_RS03850 4c2f73f57841a8715daa3db3336fc62b 161 Pfam PF01668 SmpB protein 14 77 6.2E-28 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 VV93_RS03850 4c2f73f57841a8715daa3db3336fc62b 161 PANTHER PTHR30308:SF2 2 161 1.4E-76 T 23-04-2016 VV93_RS03850 4c2f73f57841a8715daa3db3336fc62b 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 5.0E-61 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 VV93_RS03850 4c2f73f57841a8715daa3db3336fc62b 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 69.318 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 VV93_RS03850 4c2f73f57841a8715daa3db3336fc62b 161 PANTHER PTHR30308 2 161 1.4E-76 T 23-04-2016 VV93_RS03850 4c2f73f57841a8715daa3db3336fc62b 161 SUPERFAMILY SSF74982 9 139 7.85E-48 T 23-04-2016 IPR023620 Small protein B VV93_RS03850 4c2f73f57841a8715daa3db3336fc62b 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 1.1E-52 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 VV93_RS03850 4c2f73f57841a8715daa3db3336fc62b 161 Gene3D G3DSA:2.40.280.10 14 134 1.8E-47 T 23-04-2016 IPR023620 Small protein B VV93_RS07475 a4270eccf337cf3e0a7a219910982a8c 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 357 7.1E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS07475 a4270eccf337cf3e0a7a219910982a8c 365 SUPERFAMILY SSF161098 155 346 1.57E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS07475 a4270eccf337cf3e0a7a219910982a8c 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 5.6E-22 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VV93_RS07475 a4270eccf337cf3e0a7a219910982a8c 365 PANTHER PTHR30085:SF3 63 365 1.3E-182 T 23-04-2016 VV93_RS07475 a4270eccf337cf3e0a7a219910982a8c 365 PANTHER PTHR30085 63 365 1.3E-182 T 23-04-2016 VV93_RS07475 a4270eccf337cf3e0a7a219910982a8c 365 Gene3D G3DSA:1.10.3720.10 155 360 8.9E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 367 3.1E-30 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 PANTHER PTHR22573:SF15 3 446 1.1E-174 T 23-04-2016 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 3.7E-19 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 Gene3D G3DSA:3.30.310.50 370 443 1.1E-15 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 8.9E-15 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 8.9E-15 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 8.9E-15 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 SUPERFAMILY SSF53738 157 257 1.02E-29 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 Gene3D G3DSA:3.40.120.10 252 368 2.3E-30 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 SUPERFAMILY SSF53738 4 182 1.14E-48 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 Gene3D G3DSA:3.40.120.10 5 153 3.6E-48 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 2.3E-12 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 4.2E-203 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 137 9.0E-46 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 SUPERFAMILY SSF53738 259 366 4.32E-29 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 Gene3D G3DSA:3.40.120.10 177 251 6.7E-28 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 PANTHER PTHR22573 3 446 1.1E-174 T 23-04-2016 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.868 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS12250 b8747e6607240fd926d118f9024654ac 446 SUPERFAMILY SSF55957 359 445 5.76E-21 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV93_RS05035 2962952f5d112bd91cd37a52033e2787 93 Pfam PF05166 YcgL domain 3 74 1.3E-31 T 23-04-2016 IPR027354 YcgL domain VV93_RS05035 2962952f5d112bd91cd37a52033e2787 93 SUPERFAMILY SSF160191 1 92 1.27E-37 T 23-04-2016 VV93_RS05035 2962952f5d112bd91cd37a52033e2787 93 PANTHER PTHR38109 2 93 2.9E-33 T 23-04-2016 VV93_RS05035 2962952f5d112bd91cd37a52033e2787 93 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 69 5.0E-35 T 23-04-2016 IPR027354 YcgL domain VV93_RS05035 2962952f5d112bd91cd37a52033e2787 93 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.24 T 23-04-2016 IPR027354 YcgL domain VV93_RS00920 0b8dd395f72c0750c4b5abc4c4e7c3e5 130 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 5.6E-33 T 23-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VV93_RS00920 0b8dd395f72c0750c4b5abc4c4e7c3e5 130 PANTHER PTHR33162:SF4 2 130 1.4E-48 T 23-04-2016 VV93_RS00920 0b8dd395f72c0750c4b5abc4c4e7c3e5 130 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 127 17.961 T 23-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VV93_RS00920 0b8dd395f72c0750c4b5abc4c4e7c3e5 130 PANTHER PTHR33162 2 130 1.4E-48 T 23-04-2016 VV93_RS00920 0b8dd395f72c0750c4b5abc4c4e7c3e5 130 Pfam PF02416 mttA/Hcf106 family 4 32 9.6E-6 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VV93_RS00920 0b8dd395f72c0750c4b5abc4c4e7c3e5 130 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.3E-27 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 VV93_RS00920 0b8dd395f72c0750c4b5abc4c4e7c3e5 130 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.3E-27 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 VV93_RS00920 0b8dd395f72c0750c4b5abc4c4e7c3e5 130 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.3E-27 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 VV93_RS06380 7dbd66c5c574550c1c768b4ed69c211a 385 Pfam PF00155 Aminotransferase class I and II 43 377 6.2E-50 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV93_RS06380 7dbd66c5c574550c1c768b4ed69c211a 385 Gene3D G3DSA:3.40.640.10 60 271 3.4E-75 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS06380 7dbd66c5c574550c1c768b4ed69c211a 385 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 378 4.9E-130 T 23-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 VV93_RS06380 7dbd66c5c574550c1c768b4ed69c211a 385 PANTHER PTHR13693:SF53 1 384 1.4E-152 T 23-04-2016 VV93_RS06380 7dbd66c5c574550c1c768b4ed69c211a 385 Gene3D G3DSA:3.90.1150.10 272 378 3.9E-25 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS06380 7dbd66c5c574550c1c768b4ed69c211a 385 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 5 382 43.442 T 23-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 VV93_RS06380 7dbd66c5c574550c1c768b4ed69c211a 385 SUPERFAMILY SSF53383 6 378 2.64E-97 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS06380 7dbd66c5c574550c1c768b4ed69c211a 385 PANTHER PTHR13693 1 384 1.4E-152 T 23-04-2016 VV93_RS13940 73a7ad11873721809ff42f068a678bba 305 PANTHER PTHR13929:SF0 2 295 3.0E-84 T 23-04-2016 VV93_RS13940 73a7ad11873721809ff42f068a678bba 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.57 T 23-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VV93_RS13940 73a7ad11873721809ff42f068a678bba 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 295 1.7E-97 T 23-04-2016 VV93_RS13940 73a7ad11873721809ff42f068a678bba 305 PIRSF PIRSF005355 1 303 1.0E-82 T 23-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 VV93_RS13940 73a7ad11873721809ff42f068a678bba 305 PANTHER PTHR13929 2 295 3.0E-84 T 23-04-2016 VV93_RS13940 73a7ad11873721809ff42f068a678bba 305 Pfam PF01040 UbiA prenyltransferase family 21 275 4.9E-38 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 VV93_RS12950 291c67763b3b2703d13096b9a8442179 230 PANTHER PTHR34387:SF1 27 230 1.7E-50 T 23-04-2016 VV93_RS12950 291c67763b3b2703d13096b9a8442179 230 Pfam PF04402 Protein of unknown function (DUF541) 30 227 1.1E-42 T 23-04-2016 IPR007497 Protein of unknown function DUF541 VV93_RS12950 291c67763b3b2703d13096b9a8442179 230 PANTHER PTHR34387 27 230 1.7E-50 T 23-04-2016 VV93_RS08925 2362edc7066fc8ba842a32e278b025af 314 SUPERFAMILY SSF53474 32 310 5.05E-45 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS08925 2362edc7066fc8ba842a32e278b025af 314 Pfam PF00561 alpha/beta hydrolase fold 37 138 2.4E-15 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VV93_RS08925 2362edc7066fc8ba842a32e278b025af 314 Gene3D G3DSA:3.40.50.1820 29 313 4.6E-59 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS08925 2362edc7066fc8ba842a32e278b025af 314 PANTHER PTHR11440 25 146 5.3E-17 T 23-04-2016 VV93_RS13950 3fba9d6adeda795dfe253e4048d2c9d3 80 Pfam PF06005 Protein of unknown function (DUF904) 1 77 5.7E-24 T 23-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 VV93_RS13950 3fba9d6adeda795dfe253e4048d2c9d3 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.654 T 23-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 VV93_RS13950 3fba9d6adeda795dfe253e4048d2c9d3 80 Gene3D G3DSA:1.20.5.170 20 54 6.9E-4 T 23-04-2016 VV93_RS06090 40df04ae83e3f9ac68b6d92773625437 152 PANTHER PTHR11717 1 148 2.9E-54 T 23-04-2016 VV93_RS06090 40df04ae83e3f9ac68b6d92773625437 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 9.1E-23 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV93_RS06090 40df04ae83e3f9ac68b6d92773625437 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 9.1E-23 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV93_RS06090 40df04ae83e3f9ac68b6d92773625437 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 9.1E-23 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV93_RS06090 40df04ae83e3f9ac68b6d92773625437 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 9.1E-23 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV93_RS06090 40df04ae83e3f9ac68b6d92773625437 152 SMART SM00226 2 148 2.6E-40 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily VV93_RS06090 40df04ae83e3f9ac68b6d92773625437 152 Gene3D G3DSA:3.40.50.270 1 149 2.9E-50 T 23-04-2016 VV93_RS06090 40df04ae83e3f9ac68b6d92773625437 152 PANTHER PTHR11717:SF7 1 148 2.9E-54 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV93_RS06090 40df04ae83e3f9ac68b6d92773625437 152 SUPERFAMILY SSF52788 1 148 8.11E-49 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily VV93_RS06090 40df04ae83e3f9ac68b6d92773625437 152 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 145 3.7E-37 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily VV93_RS13405 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 Gene3D G3DSA:3.30.70.970 9 128 5.1E-50 T 23-04-2016 IPR009671 Regulator of ribonuclease activity B domain VV93_RS13405 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 Pfam PF06877 Regulator of ribonuclease activity B 19 120 9.7E-34 T 23-04-2016 IPR009671 Regulator of ribonuclease activity B domain VV93_RS13405 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 PIRSF PIRSF018193 8 140 3.5E-59 T 23-04-2016 IPR016716 Regulator of ribonuclease activity B VV93_RS13405 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 29.753 T 23-04-2016 IPR016716 Regulator of ribonuclease activity B VV93_RS13405 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 SUPERFAMILY SSF89946 8 126 4.97E-39 T 23-04-2016 IPR009671 Regulator of ribonuclease activity B domain VV93_RS10885 c58156ac8ae95e99f7ae72040cd89fd2 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 31.918 T 23-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 VV93_RS10885 c58156ac8ae95e99f7ae72040cd89fd2 161 PANTHER PTHR34128 1 161 3.4E-75 T 23-04-2016 VV93_RS10885 c58156ac8ae95e99f7ae72040cd89fd2 161 Gene3D G3DSA:2.40.50.140 27 130 6.8E-39 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS10885 c58156ac8ae95e99f7ae72040cd89fd2 161 PANTHER PTHR34128:SF1 1 161 3.4E-75 T 23-04-2016 VV93_RS10885 c58156ac8ae95e99f7ae72040cd89fd2 161 Pfam PF03100 CcmE 4 136 1.7E-44 T 23-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 VV93_RS10885 c58156ac8ae95e99f7ae72040cd89fd2 161 SUPERFAMILY SSF82093 30 142 1.57E-37 T 23-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 VV93_RS12260 e01a3ded979a6451f7a8b58399c6ee94 653 SUPERFAMILY SSF52540 147 395 1.2E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12260 e01a3ded979a6451f7a8b58399c6ee94 653 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 5.7E-46 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VV93_RS12260 e01a3ded979a6451f7a8b58399c6ee94 653 SMART SM00382 188 327 3.6E-26 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS12260 e01a3ded979a6451f7a8b58399c6ee94 653 PANTHER PTHR23076 3 606 0.0 T 23-04-2016 VV93_RS12260 e01a3ded979a6451f7a8b58399c6ee94 653 Pfam PF01434 Peptidase family M41 386 595 4.2E-81 T 23-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 VV93_RS12260 e01a3ded979a6451f7a8b58399c6ee94 653 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 628 37.213 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 VV93_RS12260 e01a3ded979a6451f7a8b58399c6ee94 653 Pfam PF06480 FtsH Extracellular 8 96 4.4E-12 T 23-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 VV93_RS12260 e01a3ded979a6451f7a8b58399c6ee94 653 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 VV93_RS12260 e01a3ded979a6451f7a8b58399c6ee94 653 Gene3D G3DSA:3.40.50.300 148 335 3.0E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12260 e01a3ded979a6451f7a8b58399c6ee94 653 SUPERFAMILY SSF140990 406 601 4.97E-75 T 23-04-2016 VV93_RS12260 e01a3ded979a6451f7a8b58399c6ee94 653 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 597 1.0E-241 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 VV93_RS12260 e01a3ded979a6451f7a8b58399c6ee94 653 Gene3D G3DSA:1.10.8.60 336 409 4.8E-27 T 23-04-2016 VV93_RS09700 828ed35ff0c04b3652d45efa5b7d8ad9 256 PANTHER PTHR30060 1 241 1.2E-75 T 23-04-2016 VV93_RS09700 828ed35ff0c04b3652d45efa5b7d8ad9 256 Pfam PF03741 Integral membrane protein TerC family 16 203 1.2E-41 T 23-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 VV93_RS09700 828ed35ff0c04b3652d45efa5b7d8ad9 256 PANTHER PTHR30060:SF1 1 241 1.2E-75 T 23-04-2016 VV93_RS02240 f1e882ad925374723e22b69eb5b30dad 310 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 3.4E-48 T 23-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 VV93_RS02240 f1e882ad925374723e22b69eb5b30dad 310 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 310 57.814 T 23-04-2016 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 VV93_RS02240 f1e882ad925374723e22b69eb5b30dad 310 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 5.1E-130 T 23-04-2016 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 VV93_RS02240 f1e882ad925374723e22b69eb5b30dad 310 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 4.1E-47 T 23-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 VV93_RS02240 f1e882ad925374723e22b69eb5b30dad 310 PANTHER PTHR11540:SF22 1 310 4.9E-219 T 23-04-2016 VV93_RS02240 f1e882ad925374723e22b69eb5b30dad 310 PANTHER PTHR11540 1 310 4.9E-219 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VV93_RS02240 f1e882ad925374723e22b69eb5b30dad 310 PIRSF PIRSF000102 1 306 1.5E-62 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VV93_RS02240 f1e882ad925374723e22b69eb5b30dad 310 SUPERFAMILY SSF51735 1 145 1.42E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS02240 f1e882ad925374723e22b69eb5b30dad 310 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 23-04-2016 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: REACT_474 VV93_RS02240 f1e882ad925374723e22b69eb5b30dad 310 SUPERFAMILY SSF56327 146 309 2.01E-41 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VV93_RS02240 f1e882ad925374723e22b69eb5b30dad 310 Gene3D G3DSA:3.90.110.10 147 310 8.4E-62 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VV93_RS02240 f1e882ad925374723e22b69eb5b30dad 310 Gene3D G3DSA:3.40.50.720 1 146 2.7E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS08575 bb52ea8ed2cb673924398191d5d4d843 171 PANTHER PTHR13256 1 146 1.7E-29 T 23-04-2016 VV93_RS08575 bb52ea8ed2cb673924398191d5d4d843 171 SUPERFAMILY SSF55729 2 150 1.73E-34 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS08575 bb52ea8ed2cb673924398191d5d4d843 171 Pfam PF13302 Acetyltransferase (GNAT) domain 9 147 1.0E-26 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS08575 bb52ea8ed2cb673924398191d5d4d843 171 Gene3D G3DSA:3.40.630.30 2 167 1.2E-40 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS02245 9ced80e30a82d008d64d03985b21464f 323 PANTHER PTHR12001 5 323 2.4E-127 T 23-04-2016 IPR017446 Polyprenyl synthetase-related VV93_RS02245 9ced80e30a82d008d64d03985b21464f 323 PANTHER PTHR12001:SF47 5 323 2.4E-127 T 23-04-2016 VV93_RS02245 9ced80e30a82d008d64d03985b21464f 323 Pfam PF00348 Polyprenyl synthetase 32 268 2.3E-73 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VV93_RS02245 9ced80e30a82d008d64d03985b21464f 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VV93_RS02245 9ced80e30a82d008d64d03985b21464f 323 Gene3D G3DSA:1.10.600.10 3 323 2.1E-102 T 23-04-2016 IPR008949 Isoprenoid synthase domain VV93_RS02245 9ced80e30a82d008d64d03985b21464f 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VV93_RS02245 9ced80e30a82d008d64d03985b21464f 323 SUPERFAMILY SSF48576 4 322 5.6E-101 T 23-04-2016 IPR008949 Isoprenoid synthase domain VV93_RS01130 ab81137ac4695c0829eabab896ccc79d 255 PANTHER PTHR10992:SF812 4 255 4.8E-118 T 23-04-2016 VV93_RS01130 ab81137ac4695c0829eabab896ccc79d 255 PANTHER PTHR10992 4 255 4.8E-118 T 23-04-2016 VV93_RS01130 ab81137ac4695c0829eabab896ccc79d 255 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 5 254 47.349 T 23-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 VV93_RS01130 ab81137ac4695c0829eabab896ccc79d 255 SUPERFAMILY SSF53474 4 252 5.72E-52 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS01130 ab81137ac4695c0829eabab896ccc79d 255 Gene3D G3DSA:3.40.50.1820 4 253 4.6E-55 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS01130 ab81137ac4695c0829eabab896ccc79d 255 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 11 252 2.0E-109 T 23-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 VV93_RS01130 ab81137ac4695c0829eabab896ccc79d 255 Pfam PF00561 alpha/beta hydrolase fold 16 242 1.3E-24 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VV93_RS14105 63e5d9f408005892605e5653dccdd9b1 210 SUPERFAMILY SSF46785 139 207 3.95E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS14105 63e5d9f408005892605e5653dccdd9b1 210 PANTHER PTHR24567 1 207 4.6E-154 T 23-04-2016 VV93_RS14105 63e5d9f408005892605e5653dccdd9b1 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.6E-16 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VV93_RS14105 63e5d9f408005892605e5653dccdd9b1 210 SUPERFAMILY SSF51206 8 136 1.7E-34 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like VV93_RS14105 63e5d9f408005892605e5653dccdd9b1 210 SMART SM00100 2 122 5.9E-27 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain VV93_RS14105 63e5d9f408005892605e5653dccdd9b1 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 23-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site VV93_RS14105 63e5d9f408005892605e5653dccdd9b1 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.2E-23 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain VV93_RS14105 63e5d9f408005892605e5653dccdd9b1 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 23-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VV93_RS14105 63e5d9f408005892605e5653dccdd9b1 210 Gene3D G3DSA:1.10.10.10 144 207 1.1E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS14105 63e5d9f408005892605e5653dccdd9b1 210 SMART SM00419 160 208 4.2E-17 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VV93_RS14105 63e5d9f408005892605e5653dccdd9b1 210 PANTHER PTHR24567:SF27 1 207 4.6E-154 T 23-04-2016 VV93_RS14105 63e5d9f408005892605e5653dccdd9b1 210 Gene3D G3DSA:2.60.120.10 6 143 2.3E-43 T 23-04-2016 IPR014710 RmlC-like jelly roll fold VV93_RS14105 63e5d9f408005892605e5653dccdd9b1 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VV93_RS14105 63e5d9f408005892605e5653dccdd9b1 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VV93_RS14105 63e5d9f408005892605e5653dccdd9b1 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 23-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 PANTHER PTHR23389:SF9 1 533 3.0E-203 T 23-04-2016 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 23-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 665 4.9E-263 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 Gene3D G3DSA:1.10.150.20 436 502 4.3E-25 T 23-04-2016 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 Gene3D G3DSA:1.10.287.610 3 67 1.1E-26 T 23-04-2016 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 23-04-2016 IPR018239 NAD-dependent DNA ligase, active site VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 435 1.6E-10 T 23-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 Gene3D G3DSA:2.40.50.140 321 392 6.5E-35 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 SMART SM00292 595 669 4.3E-9 T 23-04-2016 IPR001357 BRCT domain VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 SUPERFAMILY SSF47781 404 584 5.19E-61 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 Pfam PF12826 Helix-hairpin-helix motif 511 574 7.1E-24 T 23-04-2016 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 319 2.6E-132 T 23-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 SUPERFAMILY SSF50249 319 401 3.43E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 PIRSF PIRSF001604 1 669 2.2E-252 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 SMART SM00278 545 564 5.1 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 SMART SM00278 447 466 100.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 SMART SM00278 481 500 6.7 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 Hamap MF_01588 DNA ligase [ligA]. 3 669 53.514 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 SUPERFAMILY SSF52113 596 668 4.86E-17 T 23-04-2016 IPR001357 BRCT domain VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 PANTHER PTHR23389 1 533 3.0E-203 T 23-04-2016 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 Gene3D G3DSA:3.40.50.10190 595 669 2.4E-22 T 23-04-2016 IPR001357 BRCT domain VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 9.4E-36 T 23-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 Pfam PF14520 Helix-hairpin-helix domain 447 501 1.5E-5 T 23-04-2016 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 Gene3D G3DSA:3.30.470.30 120 253 2.4E-51 T 23-04-2016 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 Gene3D G3DSA:1.10.150.20 505 585 2.4E-32 T 23-04-2016 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 SUPERFAMILY SSF56091 5 317 4.8E-123 T 23-04-2016 VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 669 2.8E-11 T 23-04-2016 IPR001357 BRCT domain VV93_RS04670 bfcca4f69939e2d2e00fb741b48064f8 669 SMART SM00532 4 449 1.1E-275 T 23-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 VV93_RS05975 cf3ac182431df4806d970d6cce8be71f 411 PANTHER PTHR13939:SF3 1 286 1.1E-141 T 23-04-2016 VV93_RS05975 cf3ac182431df4806d970d6cce8be71f 411 Pfam PF00994 Probable molybdopterin binding domain 4 169 1.2E-29 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS05975 cf3ac182431df4806d970d6cce8be71f 411 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 411 102.054 T 23-04-2016 IPR008135 Competence-induced protein CinA VV93_RS05975 cf3ac182431df4806d970d6cce8be71f 411 Gene3D G3DSA:3.40.980.10 2 200 6.3E-26 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS05975 cf3ac182431df4806d970d6cce8be71f 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 166 4.6E-26 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS05975 cf3ac182431df4806d970d6cce8be71f 411 PANTHER PTHR13939 1 286 1.1E-141 T 23-04-2016 VV93_RS05975 cf3ac182431df4806d970d6cce8be71f 411 PIRSF PIRSF006728 1 391 1.1E-109 T 23-04-2016 IPR008135 Competence-induced protein CinA VV93_RS05975 cf3ac182431df4806d970d6cce8be71f 411 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 2 353 3.8E-80 T 23-04-2016 IPR008135 Competence-induced protein CinA VV93_RS05975 cf3ac182431df4806d970d6cce8be71f 411 SUPERFAMILY SSF53218 2 204 1.14E-33 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS05975 cf3ac182431df4806d970d6cce8be71f 411 SUPERFAMILY SSF142433 251 385 8.63E-6 T 23-04-2016 IPR008136 CinA, C-terminal VV93_RS05975 cf3ac182431df4806d970d6cce8be71f 411 SMART SM00852 4 171 1.9E-28 T 23-04-2016 IPR001453 MoaB/Mog domain VV93_RS13005 af857501fbf1243ae1208a810c1b77e7 168 Pfam PF10263 SprT-like family 17 161 7.1E-28 T 23-04-2016 IPR006640 SprT-like VV93_RS13005 af857501fbf1243ae1208a810c1b77e7 168 Hamap MF_00746 Protein SprT [sprT]. 10 163 43.253 T 23-04-2016 IPR023483 Uncharacterised protein family SprT VV93_RS13005 af857501fbf1243ae1208a810c1b77e7 168 PANTHER PTHR38773 1 168 8.0E-84 T 23-04-2016 VV93_RS13005 af857501fbf1243ae1208a810c1b77e7 168 SMART SM00731 14 163 8.2E-57 T 23-04-2016 IPR006640 SprT-like VV93_RS07690 fae7506ddef6c4d651bcfd8fcec923c0 230 PANTHER PTHR32309 12 187 4.0E-13 T 23-04-2016 VV93_RS07690 fae7506ddef6c4d651bcfd8fcec923c0 230 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 25 206 3.9E-7 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VV93_RS07690 fae7506ddef6c4d651bcfd8fcec923c0 230 SUPERFAMILY SSF52540 23 202 2.08E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07690 fae7506ddef6c4d651bcfd8fcec923c0 230 PANTHER PTHR32309:SF13 12 187 4.0E-13 T 23-04-2016 VV93_RS07690 fae7506ddef6c4d651bcfd8fcec923c0 230 Gene3D G3DSA:3.40.50.300 25 201 2.7E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13865 471a2f896182b22efb2c013c44244fe6 334 SUPERFAMILY SSF51735 1 168 5.26E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS13865 471a2f896182b22efb2c013c44244fe6 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 145 2.6E-29 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VV93_RS13865 471a2f896182b22efb2c013c44244fe6 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 23-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS13865 471a2f896182b22efb2c013c44244fe6 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 311 5.2E-11 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS13865 471a2f896182b22efb2c013c44244fe6 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 36.439 T 23-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS13865 471a2f896182b22efb2c013c44244fe6 334 PANTHER PTHR32338 1 334 3.0E-140 T 23-04-2016 VV93_RS13865 471a2f896182b22efb2c013c44244fe6 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 3.2E-113 T 23-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS13865 471a2f896182b22efb2c013c44244fe6 334 PANTHER PTHR32338:SF8 1 334 3.0E-140 T 23-04-2016 VV93_RS13865 471a2f896182b22efb2c013c44244fe6 334 Gene3D G3DSA:3.40.50.720 1 162 1.4E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS13865 471a2f896182b22efb2c013c44244fe6 334 SMART SM00859 3 146 1.2E-44 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VV93_RS13865 471a2f896182b22efb2c013c44244fe6 334 SUPERFAMILY SSF55347 154 308 1.42E-46 T 23-04-2016 VV93_RS13865 471a2f896182b22efb2c013c44244fe6 334 Gene3D G3DSA:3.30.360.10 163 308 3.6E-46 T 23-04-2016 VV93_RS11865 b5770498dccc13849ffb4e051714ae12 339 SUPERFAMILY SSF47413 3 60 1.3E-11 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS11865 b5770498dccc13849ffb4e051714ae12 339 Gene3D G3DSA:3.40.50.2300 63 172 6.9E-10 T 23-04-2016 VV93_RS11865 b5770498dccc13849ffb4e051714ae12 339 PANTHER PTHR30146 3 336 3.8E-91 T 23-04-2016 VV93_RS11865 b5770498dccc13849ffb4e051714ae12 339 PANTHER PTHR30146:SF4 3 336 3.8E-91 T 23-04-2016 VV93_RS11865 b5770498dccc13849ffb4e051714ae12 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS11865 b5770498dccc13849ffb4e051714ae12 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 3.8E-11 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS11865 b5770498dccc13849ffb4e051714ae12 339 Pfam PF13377 Periplasmic binding protein-like domain 172 333 3.0E-34 T 23-04-2016 VV93_RS11865 b5770498dccc13849ffb4e051714ae12 339 Gene3D G3DSA:3.40.50.2300 173 334 2.2E-52 T 23-04-2016 VV93_RS11865 b5770498dccc13849ffb4e051714ae12 339 SUPERFAMILY SSF53822 65 333 1.7E-59 T 23-04-2016 IPR028082 Periplasmic binding protein-like I VV93_RS11865 b5770498dccc13849ffb4e051714ae12 339 Gene3D G3DSA:1.10.260.40 3 59 1.3E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS11865 b5770498dccc13849ffb4e051714ae12 339 SMART SM00354 4 74 1.2E-8 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS05620 a2ecc41c6edd10d03f0e885e3f776d53 212 PANTHER PTHR33508:SF1 2 211 9.3E-93 T 23-04-2016 VV93_RS05620 a2ecc41c6edd10d03f0e885e3f776d53 212 PANTHER PTHR33508 2 211 9.3E-93 T 23-04-2016 VV93_RS05620 a2ecc41c6edd10d03f0e885e3f776d53 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 204 4.6E-66 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VV93_RS05620 a2ecc41c6edd10d03f0e885e3f776d53 212 Pfam PF01914 MarC family integral membrane protein 8 208 5.2E-65 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VV93_RS01545 ead68f356b417dfcf8c114a64c775a3e 350 Pfam PF13535 ATP-grasp domain 103 236 7.4E-7 T 23-04-2016 VV93_RS01545 ead68f356b417dfcf8c114a64c775a3e 350 SUPERFAMILY SSF56059 103 268 1.47E-17 T 23-04-2016 VV93_RS01545 ead68f356b417dfcf8c114a64c775a3e 350 Gene3D G3DSA:3.30.470.20 104 280 4.2E-14 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VV93_RS14075 ea91ae25164ad2c541cf4f82236d5d25 191 Pfam PF02525 Flavodoxin-like fold 12 178 3.0E-42 T 23-04-2016 IPR003680 Flavodoxin-like fold VV93_RS14075 ea91ae25164ad2c541cf4f82236d5d25 191 Gene3D G3DSA:3.40.50.360 12 180 3.7E-46 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS14075 ea91ae25164ad2c541cf4f82236d5d25 191 PANTHER PTHR10204:SF42 11 181 1.7E-72 T 23-04-2016 VV93_RS14075 ea91ae25164ad2c541cf4f82236d5d25 191 SUPERFAMILY SSF52218 11 184 5.24E-47 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS14075 ea91ae25164ad2c541cf4f82236d5d25 191 PANTHER PTHR10204 11 181 1.7E-72 T 23-04-2016 VV93_RS14075 ea91ae25164ad2c541cf4f82236d5d25 191 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 7 188 47.716 T 23-04-2016 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 VV93_RS13945 1182860fec68453a478cde89bc14cc43 173 PANTHER PTHR33254:SF7 1 173 2.6E-105 T 23-04-2016 VV93_RS13945 1182860fec68453a478cde89bc14cc43 173 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 159 1.6E-81 T 23-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VV93_RS13945 1182860fec68453a478cde89bc14cc43 173 Gene3D G3DSA:3.50.30.40 1 158 1.0E-49 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VV93_RS13945 1182860fec68453a478cde89bc14cc43 173 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 8.5E-69 T 23-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VV93_RS13945 1182860fec68453a478cde89bc14cc43 173 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.626 T 23-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VV93_RS13945 1182860fec68453a478cde89bc14cc43 173 Pfam PF03737 Demethylmenaquinone methyltransferase 6 152 1.8E-40 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VV93_RS13945 1182860fec68453a478cde89bc14cc43 173 PANTHER PTHR33254 1 173 2.6E-105 T 23-04-2016 VV93_RS13945 1182860fec68453a478cde89bc14cc43 173 SUPERFAMILY SSF89562 2 158 6.02E-48 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VV93_RS09975 c4ba3740a3c3b17709f17eddc6346023 184 SUPERFAMILY SSF53041 1 140 3.4E-36 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VV93_RS09975 c4ba3740a3c3b17709f17eddc6346023 184 Gene3D G3DSA:1.10.10.60 140 182 6.8E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS09975 c4ba3740a3c3b17709f17eddc6346023 184 SMART SM00857 3 140 1.8E-38 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VV93_RS09975 c4ba3740a3c3b17709f17eddc6346023 184 PANTHER PTHR30461:SF9 1 181 4.4E-38 T 23-04-2016 VV93_RS09975 c4ba3740a3c3b17709f17eddc6346023 184 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 23-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VV93_RS09975 c4ba3740a3c3b17709f17eddc6346023 184 PANTHER PTHR30461 1 181 4.4E-38 T 23-04-2016 VV93_RS09975 c4ba3740a3c3b17709f17eddc6346023 184 Pfam PF00239 Resolvase, N terminal domain 4 140 4.8E-33 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VV93_RS09975 c4ba3740a3c3b17709f17eddc6346023 184 Pfam PF13936 Helix-turn-helix domain 151 182 3.0E-7 T 23-04-2016 IPR025246 Transposase IS30-like HTH domain VV93_RS09975 c4ba3740a3c3b17709f17eddc6346023 184 Gene3D G3DSA:3.40.50.1390 4 123 1.5E-32 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VV93_RS10995 fc353ee4257e682610decd9a1771809b 136 SUPERFAMILY SSF101801 54 134 7.32E-25 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) VV93_RS10995 fc353ee4257e682610decd9a1771809b 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 5.6E-28 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VV93_RS10995 fc353ee4257e682610decd9a1771809b 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 5.6E-28 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VV93_RS10995 fc353ee4257e682610decd9a1771809b 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 5.6E-28 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VV93_RS10995 fc353ee4257e682610decd9a1771809b 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 5.6E-28 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VV93_RS10995 fc353ee4257e682610decd9a1771809b 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 6.4E-25 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) VV93_RS10995 fc353ee4257e682610decd9a1771809b 136 PANTHER PTHR22617 4 135 2.9E-35 T 23-04-2016 VV93_RS10995 fc353ee4257e682610decd9a1771809b 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 1.5E-33 T 23-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 VV93_RS10995 fc353ee4257e682610decd9a1771809b 136 Gene3D G3DSA:2.30.330.10 48 136 5.3E-38 T 23-04-2016 VV93_RS15105 4dcf2cd5d901b96dd8e5e77a4d9c1bf0 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 4.0E-40 T 23-04-2016 IPR009383 Protein of unknown function DUF1040 VV93_RS15105 4dcf2cd5d901b96dd8e5e77a4d9c1bf0 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 4.0E-45 T 23-04-2016 IPR009383 Protein of unknown function DUF1040 VV93_RS13555 e885722bde568bd9aa23ee98ce615b22 551 Pfam PF00263 Bacterial type II and III secretion system protein 350 527 7.3E-41 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 VV93_RS13555 e885722bde568bd9aa23ee98ce615b22 551 PRINTS PR00811 Bacterial general secretion pathway protein D signature 275 285 6.8E-18 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS13555 e885722bde568bd9aa23ee98ce615b22 551 PRINTS PR00811 Bacterial general secretion pathway protein D signature 345 369 6.8E-18 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS13555 e885722bde568bd9aa23ee98ce615b22 551 PRINTS PR00811 Bacterial general secretion pathway protein D signature 515 529 6.8E-18 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS13555 e885722bde568bd9aa23ee98ce615b22 551 PRINTS PR00811 Bacterial general secretion pathway protein D signature 492 510 6.8E-18 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS13555 e885722bde568bd9aa23ee98ce615b22 551 Pfam PF07655 Secretin N-terminal domain 148 246 4.5E-25 T 23-04-2016 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 VV93_RS13555 e885722bde568bd9aa23ee98ce615b22 551 PANTHER PTHR30332:SF8 189 551 2.9E-76 T 23-04-2016 VV93_RS13555 e885722bde568bd9aa23ee98ce615b22 551 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 241 527 7.9E-91 T 23-04-2016 IPR013358 Pilus biogenesis, MshL VV93_RS13555 e885722bde568bd9aa23ee98ce615b22 551 SMART SM00965 96 144 1.9E-5 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VV93_RS13555 e885722bde568bd9aa23ee98ce615b22 551 PANTHER PTHR30332 189 551 2.9E-76 T 23-04-2016 VV93_RS07560 8c470458e1f63dae5b9ef510613ea0f9 468 PANTHER PTHR30026:SF5 1 452 3.0E-189 T 23-04-2016 VV93_RS07560 8c470458e1f63dae5b9ef510613ea0f9 468 Gene3D G3DSA:1.20.1600.10 22 444 1.3E-52 T 23-04-2016 VV93_RS07560 8c470458e1f63dae5b9ef510613ea0f9 468 Pfam PF02321 Outer membrane efflux protein 28 242 5.8E-25 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VV93_RS07560 8c470458e1f63dae5b9ef510613ea0f9 468 Pfam PF02321 Outer membrane efflux protein 267 445 6.6E-24 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VV93_RS07560 8c470458e1f63dae5b9ef510613ea0f9 468 SUPERFAMILY SSF56954 105 445 1.7E-68 T 23-04-2016 VV93_RS07560 8c470458e1f63dae5b9ef510613ea0f9 468 SUPERFAMILY SSF56954 2 79 1.7E-68 T 23-04-2016 VV93_RS07560 8c470458e1f63dae5b9ef510613ea0f9 468 PANTHER PTHR30026 1 452 3.0E-189 T 23-04-2016 VV93_RS23085 bfccae73e781b88144a1551d384bae23 85 PANTHER PTHR33055:SF2 19 83 2.8E-18 T 23-04-2016 VV93_RS23085 bfccae73e781b88144a1551d384bae23 85 Pfam PF02371 Transposase IS116/IS110/IS902 family 12 83 1.9E-16 T 23-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 VV93_RS23085 bfccae73e781b88144a1551d384bae23 85 PANTHER PTHR33055 19 83 2.8E-18 T 23-04-2016 VV93_RS05800 8afac06747db536d24aee11bb70bb344 98 SUPERFAMILY SSF54909 1 98 3.58E-32 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel VV93_RS05800 8afac06747db536d24aee11bb70bb344 98 Pfam PF03795 YCII-related domain 1 95 5.1E-30 T 23-04-2016 IPR005545 YCII-related VV93_RS05800 8afac06747db536d24aee11bb70bb344 98 Gene3D G3DSA:3.30.70.1060 1 98 1.0E-37 T 23-04-2016 VV93_RS05800 8afac06747db536d24aee11bb70bb344 98 PANTHER PTHR33606 1 98 1.4E-33 T 23-04-2016 VV93_RS04950 b1426e12387b39a459e6ff2955274464 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 687 2.9E-177 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VV93_RS04950 b1426e12387b39a459e6ff2955274464 758 SUPERFAMILY SSF52540 4 181 7.14E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04950 b1426e12387b39a459e6ff2955274464 758 PANTHER PTHR11649:SF37 260 608 8.7E-251 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VV93_RS04950 b1426e12387b39a459e6ff2955274464 758 PANTHER PTHR11649:SF37 4 149 8.7E-251 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VV93_RS04950 b1426e12387b39a459e6ff2955274464 758 PANTHER PTHR11649:SF37 658 725 8.7E-251 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VV93_RS04950 b1426e12387b39a459e6ff2955274464 758 Gene3D G3DSA:3.40.50.300 4 168 1.2E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04950 b1426e12387b39a459e6ff2955274464 758 Pfam PF07670 Nucleoside recognition 509 691 5.9E-37 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VV93_RS04950 b1426e12387b39a459e6ff2955274464 758 Pfam PF07670 Nucleoside recognition 349 440 2.0E-13 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VV93_RS04950 b1426e12387b39a459e6ff2955274464 758 PANTHER PTHR11649 260 608 8.7E-251 T 23-04-2016 VV93_RS04950 b1426e12387b39a459e6ff2955274464 758 PANTHER PTHR11649 4 149 8.7E-251 T 23-04-2016 VV93_RS04950 b1426e12387b39a459e6ff2955274464 758 PANTHER PTHR11649 658 725 8.7E-251 T 23-04-2016 VV93_RS04950 b1426e12387b39a459e6ff2955274464 758 Pfam PF02421 Ferrous iron transport protein B 4 161 3.0E-58 T 23-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 VV93_RS04950 b1426e12387b39a459e6ff2955274464 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 9.9E-19 T 23-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 VV93_RS05505 d16112c5e47ddf527e71e514ebdc5665 670 PRINTS PR00419 Adrenodoxin reductase family signature 401 414 2.07E-8 T 23-04-2016 VV93_RS05505 d16112c5e47ddf527e71e514ebdc5665 670 PRINTS PR00419 Adrenodoxin reductase family signature 378 400 2.07E-8 T 23-04-2016 VV93_RS05505 d16112c5e47ddf527e71e514ebdc5665 670 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 330 3.2E-82 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VV93_RS05505 d16112c5e47ddf527e71e514ebdc5665 670 PANTHER PTHR22893:SF25 5 419 3.0E-241 T 23-04-2016 VV93_RS05505 d16112c5e47ddf527e71e514ebdc5665 670 SUPERFAMILY SSF51905 373 426 9.21E-22 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS05505 d16112c5e47ddf527e71e514ebdc5665 670 SUPERFAMILY SSF51905 526 646 9.21E-22 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS05505 d16112c5e47ddf527e71e514ebdc5665 670 SUPERFAMILY SSF51395 4 365 6.02E-108 T 23-04-2016 VV93_RS05505 d16112c5e47ddf527e71e514ebdc5665 670 Gene3D G3DSA:3.20.20.70 4 368 3.8E-119 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS05505 d16112c5e47ddf527e71e514ebdc5665 670 Gene3D G3DSA:3.40.50.720 507 523 2.8E-8 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS05505 d16112c5e47ddf527e71e514ebdc5665 670 Gene3D G3DSA:3.40.50.720 555 625 2.8E-8 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS05505 d16112c5e47ddf527e71e514ebdc5665 670 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 629 4.4E-26 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS05505 d16112c5e47ddf527e71e514ebdc5665 670 Gene3D G3DSA:3.40.50.720 373 506 3.9E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS05505 d16112c5e47ddf527e71e514ebdc5665 670 PANTHER PTHR22893 5 419 3.0E-241 T 23-04-2016 VV93_RS05505 d16112c5e47ddf527e71e514ebdc5665 670 SUPERFAMILY SSF51971 335 519 1.41E-38 T 23-04-2016 VV93_RS07360 fa5edbc3bdcc82278e9c22569b8b379b 408 PANTHER PTHR30349:SF21 13 201 2.9E-122 T 23-04-2016 VV93_RS07360 fa5edbc3bdcc82278e9c22569b8b379b 408 Gene3D G3DSA:3.10.310.10 209 386 3.8E-78 T 23-04-2016 VV93_RS07360 fa5edbc3bdcc82278e9c22569b8b379b 408 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 19 407 4.0E-228 T 23-04-2016 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 UniPathway: UPA00946 VV93_RS07360 fa5edbc3bdcc82278e9c22569b8b379b 408 Gene3D G3DSA:3.10.310.10 18 208 3.2E-91 T 23-04-2016 VV93_RS07360 fa5edbc3bdcc82278e9c22569b8b379b 408 Pfam PF04303 PrpF protein 21 403 1.6E-173 T 23-04-2016 IPR007400 PrpF protein VV93_RS07360 fa5edbc3bdcc82278e9c22569b8b379b 408 PANTHER PTHR30349 13 201 2.9E-122 T 23-04-2016 VV93_RS07360 fa5edbc3bdcc82278e9c22569b8b379b 408 SUPERFAMILY SSF54506 18 197 2.28E-70 T 23-04-2016 VV93_RS07360 fa5edbc3bdcc82278e9c22569b8b379b 408 SUPERFAMILY SSF54506 201 406 3.45E-75 T 23-04-2016 VV93_RS21975 b7f6ec6539d78ad5620e85c8ea075d86 116 SUPERFAMILY SSF53850 24 114 5.43E-18 T 23-04-2016 VV93_RS21975 b7f6ec6539d78ad5620e85c8ea075d86 116 Gene3D G3DSA:3.40.190.10 5 99 1.1E-16 T 23-04-2016 VV93_RS21975 b7f6ec6539d78ad5620e85c8ea075d86 116 PANTHER PTHR30061 6 116 4.0E-33 T 23-04-2016 VV93_RS21975 b7f6ec6539d78ad5620e85c8ea075d86 116 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 47 64 - T 23-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 VV93_RS21975 b7f6ec6539d78ad5620e85c8ea075d86 116 PANTHER PTHR30061:SF7 6 116 4.0E-33 T 23-04-2016 VV93_RS21975 b7f6ec6539d78ad5620e85c8ea075d86 116 Pfam PF13416 Bacterial extracellular solute-binding protein 21 99 1.6E-13 T 23-04-2016 VV93_RS15185 b2d92e3a8b70fd8a05d22a0ad3779cda 453 Gene3D G3DSA:3.90.550.10 1 241 2.1E-69 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS15185 b2d92e3a8b70fd8a05d22a0ad3779cda 453 SUPERFAMILY SSF53448 1 249 8.76E-64 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS15185 b2d92e3a8b70fd8a05d22a0ad3779cda 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.619 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 VV93_RS15185 b2d92e3a8b70fd8a05d22a0ad3779cda 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VV93_RS15185 b2d92e3a8b70fd8a05d22a0ad3779cda 453 PANTHER PTHR22572:SF115 4 446 7.7E-226 T 23-04-2016 VV93_RS15185 b2d92e3a8b70fd8a05d22a0ad3779cda 453 Gene3D G3DSA:2.160.10.10 242 321 1.7E-19 T 23-04-2016 VV93_RS15185 b2d92e3a8b70fd8a05d22a0ad3779cda 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 1.1E-204 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 VV93_RS15185 b2d92e3a8b70fd8a05d22a0ad3779cda 453 Gene3D G3DSA:2.160.10.10 322 452 8.7E-34 T 23-04-2016 VV93_RS15185 b2d92e3a8b70fd8a05d22a0ad3779cda 453 Pfam PF12804 MobA-like NTP transferase domain 5 124 7.4E-23 T 23-04-2016 IPR025877 MobA-like NTP transferase VV93_RS15185 b2d92e3a8b70fd8a05d22a0ad3779cda 453 SUPERFAMILY SSF51161 252 434 3.54E-51 T 23-04-2016 IPR011004 Trimeric LpxA-like VV93_RS15185 b2d92e3a8b70fd8a05d22a0ad3779cda 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 268 296 4.5E-5 T 23-04-2016 IPR001451 Hexapeptide repeat VV93_RS15185 b2d92e3a8b70fd8a05d22a0ad3779cda 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.6E-7 T 23-04-2016 IPR001451 Hexapeptide repeat VV93_RS15185 b2d92e3a8b70fd8a05d22a0ad3779cda 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 8.8E-4 T 23-04-2016 IPR001451 Hexapeptide repeat VV93_RS15185 b2d92e3a8b70fd8a05d22a0ad3779cda 453 PANTHER PTHR22572 4 446 7.7E-226 T 23-04-2016 VV93_RS07140 2c9a6eb1ab859f70cb7428f34d7d0580 76 PANTHER PTHR34386 1 73 3.3E-18 T 23-04-2016 VV93_RS07140 2c9a6eb1ab859f70cb7428f34d7d0580 76 Gene3D G3DSA:3.40.30.10 3 74 1.9E-18 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS07140 2c9a6eb1ab859f70cb7428f34d7d0580 76 Pfam PF00462 Glutaredoxin 4 60 1.7E-12 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VV93_RS07140 2c9a6eb1ab859f70cb7428f34d7d0580 76 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 23-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 VV93_RS07140 2c9a6eb1ab859f70cb7428f34d7d0580 76 PANTHER PTHR34386:SF1 1 73 3.3E-18 T 23-04-2016 VV93_RS07140 2c9a6eb1ab859f70cb7428f34d7d0580 76 SUPERFAMILY SSF52833 3 72 4.28E-14 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS04765 0377a5b0e2066d90ac0a6c2d0982393a 336 PANTHER PTHR11108 13 336 8.9E-123 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VV93_RS04765 0377a5b0e2066d90ac0a6c2d0982393a 336 SUPERFAMILY SSF53800 22 335 7.19E-99 T 23-04-2016 VV93_RS04765 0377a5b0e2066d90ac0a6c2d0982393a 336 Gene3D G3DSA:3.40.50.1400 219 336 1.0E-31 T 23-04-2016 VV93_RS04765 0377a5b0e2066d90ac0a6c2d0982393a 336 TIGRFAM TIGR00109 hemH: ferrochelatase 21 335 5.1E-101 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VV93_RS04765 0377a5b0e2066d90ac0a6c2d0982393a 336 ProSitePatterns PS00534 Ferrochelatase signature. 206 224 - T 23-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VV93_RS04765 0377a5b0e2066d90ac0a6c2d0982393a 336 Pfam PF00762 Ferrochelatase 23 335 5.4E-107 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VV93_RS04765 0377a5b0e2066d90ac0a6c2d0982393a 336 Hamap MF_00323 Ferrochelatase [hemH]. 22 336 35.789 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VV93_RS04765 0377a5b0e2066d90ac0a6c2d0982393a 336 Gene3D G3DSA:3.40.50.1400 22 218 3.0E-65 T 23-04-2016 VV93_RS00245 194a5293c8e5f705435f1c15a2b6b0d1 325 Gene3D G3DSA:1.10.3720.10 88 312 3.8E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS00245 194a5293c8e5f705435f1c15a2b6b0d1 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 5.8E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS00245 194a5293c8e5f705435f1c15a2b6b0d1 325 PANTHER PTHR30465 1 320 2.0E-209 T 23-04-2016 VV93_RS00245 194a5293c8e5f705435f1c15a2b6b0d1 325 PANTHER PTHR30465:SF47 1 320 2.0E-209 T 23-04-2016 VV93_RS00245 194a5293c8e5f705435f1c15a2b6b0d1 325 SUPERFAMILY SSF161098 89 302 3.79E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS10155 2e40667b1677533831bac454e2aec3bd 551 Gene3D G3DSA:3.50.50.60 465 531 5.8E-125 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS10155 2e40667b1677533831bac454e2aec3bd 551 Gene3D G3DSA:3.50.50.60 2 125 5.8E-125 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS10155 2e40667b1677533831bac454e2aec3bd 551 Gene3D G3DSA:3.50.50.60 186 312 5.8E-125 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS10155 2e40667b1677533831bac454e2aec3bd 551 PIRSF PIRSF000137 1 536 4.7E-150 T 23-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 VV93_RS10155 2e40667b1677533831bac454e2aec3bd 551 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 VV93_RS10155 2e40667b1677533831bac454e2aec3bd 551 SUPERFAMILY SSF51905 2 287 1.31E-92 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS10155 2e40667b1677533831bac454e2aec3bd 551 SUPERFAMILY SSF51905 471 532 1.31E-92 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS10155 2e40667b1677533831bac454e2aec3bd 551 Pfam PF00732 GMC oxidoreductase 4 294 1.9E-90 T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 VV93_RS10155 2e40667b1677533831bac454e2aec3bd 551 Pfam PF05199 GMC oxidoreductase 387 524 1.5E-40 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 VV93_RS10155 2e40667b1677533831bac454e2aec3bd 551 SUPERFAMILY SSF54373 289 472 9.81E-47 T 23-04-2016 VV93_RS10155 2e40667b1677533831bac454e2aec3bd 551 PANTHER PTHR11552 1 546 1.4E-209 T 23-04-2016 VV93_RS10155 2e40667b1677533831bac454e2aec3bd 551 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 253 267 - T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 VV93_RS13450 334538b2d35eaea6c3fdffdcbd4d933d 459 SUPERFAMILY SSF52540 248 438 9.81E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13450 334538b2d35eaea6c3fdffdcbd4d933d 459 SUPERFAMILY SSF52540 159 210 9.81E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13450 334538b2d35eaea6c3fdffdcbd4d933d 459 Pfam PF13638 PIN domain 9 150 5.0E-35 T 23-04-2016 IPR002716 PIN domain VV93_RS13450 334538b2d35eaea6c3fdffdcbd4d933d 459 SMART SM00670 7 141 4.9E-11 T 23-04-2016 IPR002716 PIN domain VV93_RS13450 334538b2d35eaea6c3fdffdcbd4d933d 459 Gene3D G3DSA:3.40.50.300 247 457 1.8E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13450 334538b2d35eaea6c3fdffdcbd4d933d 459 PANTHER PTHR30473 6 182 8.6E-202 T 23-04-2016 VV93_RS13450 334538b2d35eaea6c3fdffdcbd4d933d 459 PANTHER PTHR30473 200 459 8.6E-202 T 23-04-2016 VV93_RS13450 334538b2d35eaea6c3fdffdcbd4d933d 459 PANTHER PTHR30473:SF2 6 182 8.6E-202 T 23-04-2016 VV93_RS13450 334538b2d35eaea6c3fdffdcbd4d933d 459 PANTHER PTHR30473:SF2 200 459 8.6E-202 T 23-04-2016 VV93_RS13450 334538b2d35eaea6c3fdffdcbd4d933d 459 Pfam PF02562 PhoH-like protein 249 453 4.6E-54 T 23-04-2016 IPR003714 PhoH-like protein GO:0005524 VV93_RS13450 334538b2d35eaea6c3fdffdcbd4d933d 459 Gene3D G3DSA:3.40.50.1010 104 151 1.3E-15 T 23-04-2016 IPR029060 PIN domain-like VV93_RS13450 334538b2d35eaea6c3fdffdcbd4d933d 459 Gene3D G3DSA:3.40.50.1010 9 67 1.3E-15 T 23-04-2016 IPR029060 PIN domain-like VV93_RS13450 334538b2d35eaea6c3fdffdcbd4d933d 459 SUPERFAMILY SSF88723 7 68 2.75E-14 T 23-04-2016 IPR029060 PIN domain-like VV93_RS13450 334538b2d35eaea6c3fdffdcbd4d933d 459 SUPERFAMILY SSF88723 104 161 2.75E-14 T 23-04-2016 IPR029060 PIN domain-like VV93_RS14100 96844abbb627fcde05e024c8cf5ff061 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 8.1E-28 T 23-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VV93_RS14100 96844abbb627fcde05e024c8cf5ff061 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 8.1E-28 T 23-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VV93_RS14100 96844abbb627fcde05e024c8cf5ff061 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 8.1E-28 T 23-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VV93_RS14100 96844abbb627fcde05e024c8cf5ff061 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 8.1E-28 T 23-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VV93_RS14100 96844abbb627fcde05e024c8cf5ff061 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.0E-70 T 23-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 VV93_RS14100 96844abbb627fcde05e024c8cf5ff061 289 SUPERFAMILY SSF52540 4 286 8.65E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14100 96844abbb627fcde05e024c8cf5ff061 289 PANTHER PTHR10285:SF72 1 284 1.1E-153 T 23-04-2016 VV93_RS14100 96844abbb627fcde05e024c8cf5ff061 289 Gene3D G3DSA:3.40.50.300 1 288 6.8E-127 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14100 96844abbb627fcde05e024c8cf5ff061 289 PANTHER PTHR10285 1 284 1.1E-153 T 23-04-2016 VV93_RS12320 98410e6eed6f1d7dd75f6c4309f1681b 113 Gene3D G3DSA:2.60.300.12 6 99 3.0E-31 T 23-04-2016 IPR000361 FeS cluster biogenesis VV93_RS12320 98410e6eed6f1d7dd75f6c4309f1681b 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 3.8E-37 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 VV93_RS12320 98410e6eed6f1d7dd75f6c4309f1681b 113 PANTHER PTHR10072 8 113 9.8E-46 T 23-04-2016 VV93_RS12320 98410e6eed6f1d7dd75f6c4309f1681b 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 4.8E-19 T 23-04-2016 IPR000361 FeS cluster biogenesis VV93_RS12320 98410e6eed6f1d7dd75f6c4309f1681b 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.96 T 23-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 VV93_RS12320 98410e6eed6f1d7dd75f6c4309f1681b 113 SUPERFAMILY SSF89360 7 99 8.83E-30 T 23-04-2016 IPR000361 FeS cluster biogenesis VV93_RS12320 98410e6eed6f1d7dd75f6c4309f1681b 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 23-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site VV93_RS05875 276f379ed29e6789512d69b5e3f815f9 320 SUPERFAMILY SSF55120 68 235 2.26E-42 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS05875 276f379ed29e6789512d69b5e3f815f9 320 Pfam PF00849 RNA pseudouridylate synthase 68 202 5.2E-17 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS05875 276f379ed29e6789512d69b5e3f815f9 320 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VV93_RS05875 276f379ed29e6789512d69b5e3f815f9 320 PANTHER PTHR21600:SF2 1 309 1.9E-94 T 23-04-2016 VV93_RS05875 276f379ed29e6789512d69b5e3f815f9 320 Gene3D G3DSA:3.10.290.10 3 62 1.8E-15 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS05875 276f379ed29e6789512d69b5e3f815f9 320 PANTHER PTHR21600 1 309 1.9E-94 T 23-04-2016 VV93_RS05875 276f379ed29e6789512d69b5e3f815f9 320 Pfam PF01479 S4 domain 4 44 1.6E-10 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS05875 276f379ed29e6789512d69b5e3f815f9 320 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 2.7E-54 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VV93_RS05875 276f379ed29e6789512d69b5e3f815f9 320 SMART SM00363 3 73 5.8E-9 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS05875 276f379ed29e6789512d69b5e3f815f9 320 SUPERFAMILY SSF55174 4 96 8.92E-12 T 23-04-2016 VV93_RS11935 3c592471cbc0aab009729b16c71d2866 383 TIGRFAM TIGR00937 2A51: chromate efflux transporter 11 377 6.5E-94 T 23-04-2016 IPR014047 Chromate transporter, long chain VV93_RS11935 3c592471cbc0aab009729b16c71d2866 383 Pfam PF02417 Chromate transporter 5 171 6.8E-34 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 VV93_RS11935 3c592471cbc0aab009729b16c71d2866 383 Pfam PF02417 Chromate transporter 214 375 1.8E-35 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 VV93_RS11935 3c592471cbc0aab009729b16c71d2866 383 PIRSF PIRSF004810 1 383 9.8E-122 T 23-04-2016 IPR014047 Chromate transporter, long chain VV93_RS11935 3c592471cbc0aab009729b16c71d2866 383 PANTHER PTHR33567 3 383 3.5E-122 T 23-04-2016 VV93_RS11935 3c592471cbc0aab009729b16c71d2866 383 PANTHER PTHR33567:SF3 3 383 3.5E-122 T 23-04-2016 VV93_RS08155 30846793b3394a9e8db6742e4c92e654 781 SUPERFAMILY SSF52540 456 626 2.23E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08155 30846793b3394a9e8db6742e4c92e654 781 Gene3D G3DSA:3.40.50.300 459 585 6.5E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00415 dd113d522a19a533e11949c8f6051286 312 PIRSF PIRSF001438 1 312 3.1E-124 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00415 dd113d522a19a533e11949c8f6051286 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 5.5E-116 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00415 dd113d522a19a533e11949c8f6051286 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 3.6E-48 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00415 dd113d522a19a533e11949c8f6051286 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 3.6E-48 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00415 dd113d522a19a533e11949c8f6051286 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 3.6E-48 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00415 dd113d522a19a533e11949c8f6051286 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 3.6E-48 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00415 dd113d522a19a533e11949c8f6051286 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 3.6E-48 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00415 dd113d522a19a533e11949c8f6051286 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 3.1E-20 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00415 dd113d522a19a533e11949c8f6051286 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 23-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00415 dd113d522a19a533e11949c8f6051286 312 SUPERFAMILY SSF54782 221 310 2.75E-28 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00415 dd113d522a19a533e11949c8f6051286 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 214 1.4E-80 T 23-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00415 dd113d522a19a533e11949c8f6051286 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 40.214 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00415 dd113d522a19a533e11949c8f6051286 312 SUPERFAMILY SSF53850 6 220 3.26E-87 T 23-04-2016 VV93_RS00415 dd113d522a19a533e11949c8f6051286 312 Gene3D G3DSA:3.40.190.10 4 111 1.7E-49 T 23-04-2016 VV93_RS00415 dd113d522a19a533e11949c8f6051286 312 Gene3D G3DSA:3.40.190.10 112 200 8.5E-41 T 23-04-2016 VV93_RS00415 dd113d522a19a533e11949c8f6051286 312 PANTHER PTHR11557 7 312 5.7E-170 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00415 dd113d522a19a533e11949c8f6051286 312 Gene3D G3DSA:3.30.160.40 222 306 1.5E-27 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS09305 6006fe2c9508fc9c2e66314698e9e8d6 439 SUPERFAMILY SSF55073 295 436 2.43E-37 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS09305 6006fe2c9508fc9c2e66314698e9e8d6 439 Pfam PF00990 Diguanylate cyclase, GGDEF domain 291 434 8.2E-36 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09305 6006fe2c9508fc9c2e66314698e9e8d6 439 PANTHER PTHR10799:SF750 318 435 3.9E-24 T 23-04-2016 VV93_RS09305 6006fe2c9508fc9c2e66314698e9e8d6 439 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 287 436 2.0E-39 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09305 6006fe2c9508fc9c2e66314698e9e8d6 439 SMART SM00267 279 438 1.2E-45 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09305 6006fe2c9508fc9c2e66314698e9e8d6 439 Gene3D G3DSA:3.30.70.270 292 436 3.9E-42 T 23-04-2016 VV93_RS09305 6006fe2c9508fc9c2e66314698e9e8d6 439 PANTHER PTHR10799 318 435 3.9E-24 T 23-04-2016 VV93_RS06360 7d48d1fa24496b6bb66a519e0b7b9388 449 SUPERFAMILY SSF48019 253 435 2.3E-73 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VV93_RS06360 7d48d1fa24496b6bb66a519e0b7b9388 449 SUPERFAMILY SSF52540 11 236 1.09E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06360 7d48d1fa24496b6bb66a519e0b7b9388 449 Gene3D G3DSA:3.40.50.300 13 154 1.1E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06360 7d48d1fa24496b6bb66a519e0b7b9388 449 PANTHER PTHR13779 8 449 5.3E-202 T 23-04-2016 VV93_RS06360 7d48d1fa24496b6bb66a519e0b7b9388 449 Gene3D G3DSA:1.20.272.10 250 348 7.4E-43 T 23-04-2016 VV93_RS06360 7d48d1fa24496b6bb66a519e0b7b9388 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 1.4E-16 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VV93_RS06360 7d48d1fa24496b6bb66a519e0b7b9388 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 1.3E-67 T 23-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal VV93_RS06360 7d48d1fa24496b6bb66a519e0b7b9388 449 Gene3D G3DSA:1.10.3710.10 349 447 1.9E-34 T 23-04-2016 VV93_RS06360 7d48d1fa24496b6bb66a519e0b7b9388 449 Gene3D G3DSA:1.10.8.60 155 243 1.6E-7 T 23-04-2016 VV93_RS06360 7d48d1fa24496b6bb66a519e0b7b9388 449 PANTHER PTHR13779:SF7 8 449 5.3E-202 T 23-04-2016 VV93_RS06360 7d48d1fa24496b6bb66a519e0b7b9388 449 SMART SM00382 50 166 1.6E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS06360 7d48d1fa24496b6bb66a519e0b7b9388 449 Pfam PF16193 AAA C-terminal domain 190 268 1.5E-19 T 23-04-2016 IPR032423 AAA ATPase, C-terminal domain VV93_RS02435 f4f8a374c7c3db3635128d689c91eede 585 Gene3D G3DSA:3.40.630.30 348 454 5.9E-8 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS02435 f4f8a374c7c3db3635128d689c91eede 585 SMART SM00563 75 199 1.4E-5 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VV93_RS02435 f4f8a374c7c3db3635128d689c91eede 585 Pfam PF13444 Acetyltransferase (GNAT) domain 333 433 1.8E-21 T 23-04-2016 VV93_RS02435 f4f8a374c7c3db3635128d689c91eede 585 SUPERFAMILY SSF55729 315 455 1.11E-22 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS02435 f4f8a374c7c3db3635128d689c91eede 585 Pfam PF01553 Acyltransferase 66 193 1.5E-5 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VV93_RS02435 f4f8a374c7c3db3635128d689c91eede 585 PANTHER PTHR37323 1 585 6.0E-120 T 23-04-2016 VV93_RS02435 f4f8a374c7c3db3635128d689c91eede 585 SUPERFAMILY SSF69593 59 243 2.62E-7 T 23-04-2016 VV93_RS02435 f4f8a374c7c3db3635128d689c91eede 585 PANTHER PTHR37323:SF1 1 585 6.0E-120 T 23-04-2016 VV93_RS10040 46004e9c732ca6de3281633b5daf0dc4 181 PANTHER PTHR30128:SF18 36 181 3.0E-56 T 23-04-2016 VV93_RS10040 46004e9c732ca6de3281633b5daf0dc4 181 PRINTS PR01021 OMPA domain signature 111 126 1.5E-16 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV93_RS10040 46004e9c732ca6de3281633b5daf0dc4 181 PRINTS PR01021 OMPA domain signature 81 103 1.5E-16 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV93_RS10040 46004e9c732ca6de3281633b5daf0dc4 181 PRINTS PR01021 OMPA domain signature 126 142 1.5E-16 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV93_RS10040 46004e9c732ca6de3281633b5daf0dc4 181 Gene3D G3DSA:3.30.1330.60 69 180 2.0E-34 T 23-04-2016 IPR006665 OmpA-like domain VV93_RS10040 46004e9c732ca6de3281633b5daf0dc4 181 Pfam PF00691 OmpA family 80 175 2.5E-22 T 23-04-2016 IPR006665 OmpA-like domain VV93_RS10040 46004e9c732ca6de3281633b5daf0dc4 181 ProSitePatterns PS01068 OmpA-like domain. 113 157 - T 23-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VV93_RS10040 46004e9c732ca6de3281633b5daf0dc4 181 PANTHER PTHR30128 36 181 3.0E-56 T 23-04-2016 VV93_RS10040 46004e9c732ca6de3281633b5daf0dc4 181 SUPERFAMILY SSF103088 72 181 1.44E-33 T 23-04-2016 IPR006665 OmpA-like domain VV93_RS10040 46004e9c732ca6de3281633b5daf0dc4 181 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 78 181 1.6E-44 T 23-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 VV93_RS01010 b59d40d2c73f066114e8bcc81eb4614a 213 Gene3D G3DSA:1.20.1260.10 60 148 9.9E-4 T 23-04-2016 IPR012347 Ferritin-related VV93_RS01010 b59d40d2c73f066114e8bcc81eb4614a 213 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 4.6E-89 T 23-04-2016 IPR021342 Protein of unknown function DUF2959 VV93_RS12800 a35a354615fcaeeffe503edd3b9b1b2e 741 SUPERFAMILY SSF81271 396 462 1.07E-20 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VV93_RS12800 a35a354615fcaeeffe503edd3b9b1b2e 741 SUPERFAMILY SSF81301 195 407 1.41E-62 T 23-04-2016 VV93_RS12800 a35a354615fcaeeffe503edd3b9b1b2e 741 Pfam PF13291 ACT domain 663 739 5.0E-14 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VV93_RS12800 a35a354615fcaeeffe503edd3b9b1b2e 741 Gene3D G3DSA:3.10.20.30 403 464 3.6E-24 T 23-04-2016 IPR012675 Beta-grasp domain VV93_RS12800 a35a354615fcaeeffe503edd3b9b1b2e 741 SUPERFAMILY SSF109604 37 205 1.35E-41 T 23-04-2016 VV93_RS12800 a35a354615fcaeeffe503edd3b9b1b2e 741 SMART SM00954 250 360 3.2E-64 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 VV93_RS12800 a35a354615fcaeeffe503edd3b9b1b2e 741 Gene3D G3DSA:3.30.460.10 193 339 1.3E-49 T 23-04-2016 VV93_RS12800 a35a354615fcaeeffe503edd3b9b1b2e 741 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 1.9E-36 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 VV93_RS12800 a35a354615fcaeeffe503edd3b9b1b2e 741 Gene3D G3DSA:3.30.70.260 663 737 5.9E-17 T 23-04-2016 VV93_RS12800 a35a354615fcaeeffe503edd3b9b1b2e 741 Pfam PF13328 HD domain 52 190 4.2E-35 T 23-04-2016 IPR003607 HD/PDEase domain VV93_RS12800 a35a354615fcaeeffe503edd3b9b1b2e 741 PANTHER PTHR21262:SF5 54 741 0.0 T 23-04-2016 VV93_RS12800 a35a354615fcaeeffe503edd3b9b1b2e 741 PANTHER PTHR21262 54 741 0.0 T 23-04-2016 VV93_RS12800 a35a354615fcaeeffe503edd3b9b1b2e 741 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 739 2.5E-184 T 23-04-2016 IPR004811 RelA/SpoT family GO:0015969 VV93_RS12800 a35a354615fcaeeffe503edd3b9b1b2e 741 Pfam PF02824 TGS domain 403 462 9.3E-22 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 VV93_RS12800 a35a354615fcaeeffe503edd3b9b1b2e 741 SUPERFAMILY SSF55021 664 739 3.57E-9 T 23-04-2016 VV93_RS04400 4310069db47ea0495ebd201acc339cad 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.571 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VV93_RS04400 4310069db47ea0495ebd201acc339cad 196 Gene3D G3DSA:3.40.50.1470 3 193 4.7E-71 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VV93_RS04400 4310069db47ea0495ebd201acc339cad 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VV93_RS04400 4310069db47ea0495ebd201acc339cad 196 SUPERFAMILY SSF53178 5 194 2.88E-68 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VV93_RS04400 4310069db47ea0495ebd201acc339cad 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 189 1.0E-52 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VV93_RS04400 4310069db47ea0495ebd201acc339cad 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VV93_RS04400 4310069db47ea0495ebd201acc339cad 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 6.0E-68 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VV93_RS04400 4310069db47ea0495ebd201acc339cad 196 PANTHER PTHR17224 5 195 3.7E-84 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VV93_RS10300 cbc081a555c7088149aa859047bbc95d 234 PANTHER PTHR21600:SF23 34 158 8.9E-89 T 23-04-2016 VV93_RS10300 cbc081a555c7088149aa859047bbc95d 234 PANTHER PTHR21600:SF23 175 231 8.9E-89 T 23-04-2016 VV93_RS10300 cbc081a555c7088149aa859047bbc95d 234 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 92 106 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VV93_RS10300 cbc081a555c7088149aa859047bbc95d 234 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 61 231 9.8E-59 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VV93_RS10300 cbc081a555c7088149aa859047bbc95d 234 SUPERFAMILY SSF55120 55 233 2.24E-44 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS10300 cbc081a555c7088149aa859047bbc95d 234 Pfam PF00849 RNA pseudouridylate synthase 57 201 5.8E-16 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS10300 cbc081a555c7088149aa859047bbc95d 234 PANTHER PTHR21600 34 158 8.9E-89 T 23-04-2016 VV93_RS10300 cbc081a555c7088149aa859047bbc95d 234 PANTHER PTHR21600 175 231 8.9E-89 T 23-04-2016 VV93_RS03430 6795f0655b39b44c0bb757aa28cd79ce 556 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 323 537 9.4E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS03430 6795f0655b39b44c0bb757aa28cd79ce 556 SUPERFAMILY SSF161098 285 537 9.03E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS03430 6795f0655b39b44c0bb757aa28cd79ce 556 PANTHER PTHR30425:SF7 195 553 1.3E-239 T 23-04-2016 VV93_RS03430 6795f0655b39b44c0bb757aa28cd79ce 556 Gene3D G3DSA:1.10.3720.10 23 43 1.1E-49 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS03430 6795f0655b39b44c0bb757aa28cd79ce 556 Gene3D G3DSA:1.10.3720.10 282 551 1.1E-49 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS03430 6795f0655b39b44c0bb757aa28cd79ce 556 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 287 547 2.4E-76 T 23-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VV93_RS03430 6795f0655b39b44c0bb757aa28cd79ce 556 PANTHER PTHR30425 195 553 1.3E-239 T 23-04-2016 VV93_RS14150 14e306c2c706d5a6a06bff3e73740bd3 228 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 225 34.685 T 23-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 VV93_RS14150 14e306c2c706d5a6a06bff3e73740bd3 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 83 194 9.0E-10 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VV93_RS14150 14e306c2c706d5a6a06bff3e73740bd3 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 6.1E-10 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VV93_RS14150 14e306c2c706d5a6a06bff3e73740bd3 228 SUPERFAMILY SSF56784 5 224 4.07E-60 T 23-04-2016 IPR023214 HAD-like domain VV93_RS14150 14e306c2c706d5a6a06bff3e73740bd3 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 193 2.3E-36 T 23-04-2016 IPR023214 HAD-like domain VV93_RS14150 14e306c2c706d5a6a06bff3e73740bd3 228 PANTHER PTHR18901:SF14 1 224 2.8E-67 T 23-04-2016 VV93_RS14150 14e306c2c706d5a6a06bff3e73740bd3 228 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 223 7.2E-59 T 23-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 VV93_RS14150 14e306c2c706d5a6a06bff3e73740bd3 228 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 88 193 6.8E-15 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VV93_RS14150 14e306c2c706d5a6a06bff3e73740bd3 228 Gene3D G3DSA:3.40.50.1000 85 224 7.6E-45 T 23-04-2016 IPR023214 HAD-like domain VV93_RS14150 14e306c2c706d5a6a06bff3e73740bd3 228 PANTHER PTHR18901 1 224 2.8E-67 T 23-04-2016 VV93_RS14150 14e306c2c706d5a6a06bff3e73740bd3 228 Gene3D G3DSA:1.10.150.240 21 84 1.3E-21 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 VV93_RS01955 a6ad3de17abb5f9b41c631f2f91d80ea 150 PANTHER PTHR23091 9 147 6.6E-43 T 23-04-2016 VV93_RS01955 a6ad3de17abb5f9b41c631f2f91d80ea 150 PANTHER PTHR23091:SF275 9 147 6.6E-43 T 23-04-2016 VV93_RS01955 a6ad3de17abb5f9b41c631f2f91d80ea 150 SUPERFAMILY SSF55729 1 149 1.03E-37 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS01955 a6ad3de17abb5f9b41c631f2f91d80ea 150 Pfam PF13673 Acetyltransferase (GNAT) domain 46 148 1.1E-16 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS01955 a6ad3de17abb5f9b41c631f2f91d80ea 150 Gene3D G3DSA:3.40.630.30 2 148 1.4E-49 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS02420 f5ecc3e7dc0d4a7c38a13b8d55dacef2 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 379 40.489 T 23-04-2016 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VV93_RS02420 f5ecc3e7dc0d4a7c38a13b8d55dacef2 382 Gene3D G3DSA:1.10.1040.10 205 382 1.7E-46 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VV93_RS02420 f5ecc3e7dc0d4a7c38a13b8d55dacef2 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 4.2E-23 T 23-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 VV93_RS02420 f5ecc3e7dc0d4a7c38a13b8d55dacef2 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 374 4.5E-57 T 23-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 VV93_RS02420 f5ecc3e7dc0d4a7c38a13b8d55dacef2 382 SUPERFAMILY SSF51735 3 202 6.3E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS02420 f5ecc3e7dc0d4a7c38a13b8d55dacef2 382 PANTHER PTHR30524 1 382 4.9E-193 T 23-04-2016 VV93_RS02420 f5ecc3e7dc0d4a7c38a13b8d55dacef2 382 PANTHER PTHR30524:SF0 1 382 4.9E-193 T 23-04-2016 VV93_RS02420 f5ecc3e7dc0d4a7c38a13b8d55dacef2 382 Gene3D G3DSA:3.40.50.720 3 201 2.7E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS02420 f5ecc3e7dc0d4a7c38a13b8d55dacef2 382 SUPERFAMILY SSF48179 205 382 2.58E-44 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VV93_RS02420 f5ecc3e7dc0d4a7c38a13b8d55dacef2 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 23-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VV93_RS02420 f5ecc3e7dc0d4a7c38a13b8d55dacef2 382 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 7.7E-18 T 23-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VV93_RS02420 f5ecc3e7dc0d4a7c38a13b8d55dacef2 382 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 7.7E-18 T 23-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VV93_RS02420 f5ecc3e7dc0d4a7c38a13b8d55dacef2 382 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 7.7E-18 T 23-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VV93_RS02420 f5ecc3e7dc0d4a7c38a13b8d55dacef2 382 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 7.7E-18 T 23-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VV93_RS12805 4d4caefddc715c5b1fdc7aa8131d792f 438 PANTHER PTHR11061 18 438 4.9E-131 T 23-04-2016 VV93_RS12805 4d4caefddc715c5b1fdc7aa8131d792f 438 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 438 63.304 T 23-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 VV93_RS12805 4d4caefddc715c5b1fdc7aa8131d792f 438 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 8.3E-131 T 23-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 VV93_RS12805 4d4caefddc715c5b1fdc7aa8131d792f 438 SUPERFAMILY SSF53335 76 438 7.13E-85 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS12805 4d4caefddc715c5b1fdc7aa8131d792f 438 Gene3D G3DSA:3.40.50.150 259 437 6.6E-57 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS12805 4d4caefddc715c5b1fdc7aa8131d792f 438 Gene3D G3DSA:2.40.50.140 4 88 2.0E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS12805 4d4caefddc715c5b1fdc7aa8131d792f 438 Pfam PF01938 TRAM domain 17 68 3.3E-12 T 23-04-2016 IPR002792 TRAM domain VV93_RS12805 4d4caefddc715c5b1fdc7aa8131d792f 438 PANTHER PTHR11061:SF30 18 438 4.9E-131 T 23-04-2016 VV93_RS12805 4d4caefddc715c5b1fdc7aa8131d792f 438 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 23-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site VV93_RS12805 4d4caefddc715c5b1fdc7aa8131d792f 438 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 23-04-2016 IPR030390 RNA methyltransferase TrmA, active site VV93_RS12805 4d4caefddc715c5b1fdc7aa8131d792f 438 SUPERFAMILY SSF50249 9 69 7.42E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS12805 4d4caefddc715c5b1fdc7aa8131d792f 438 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 97 437 2.7E-32 T 23-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VV93_RS10315 6cf5dc76085eebef0e59cdf519dba047 691 Pfam PF13307 Helicase C-terminal domain 526 684 3.1E-36 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VV93_RS10315 6cf5dc76085eebef0e59cdf519dba047 691 Pfam PF06733 DEAD_2 198 261 1.1E-4 T 23-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 VV93_RS10315 6cf5dc76085eebef0e59cdf519dba047 691 Gene3D G3DSA:3.40.50.300 212 253 2.7E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10315 6cf5dc76085eebef0e59cdf519dba047 691 Gene3D G3DSA:3.40.50.300 47 131 2.7E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10315 6cf5dc76085eebef0e59cdf519dba047 691 Gene3D G3DSA:3.40.50.300 508 667 7.1E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10315 6cf5dc76085eebef0e59cdf519dba047 691 SMART SM00491 539 671 8.6E-28 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VV93_RS10315 6cf5dc76085eebef0e59cdf519dba047 691 PANTHER PTHR11472 1 687 1.5E-268 T 23-04-2016 VV93_RS10315 6cf5dc76085eebef0e59cdf519dba047 691 PANTHER PTHR11472:SF32 1 687 1.5E-268 T 23-04-2016 VV93_RS10315 6cf5dc76085eebef0e59cdf519dba047 691 SUPERFAMILY SSF52540 507 610 8.09E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10315 6cf5dc76085eebef0e59cdf519dba047 691 SUPERFAMILY SSF52540 641 666 8.09E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10315 6cf5dc76085eebef0e59cdf519dba047 691 SUPERFAMILY SSF52540 630 667 3.01E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10315 6cf5dc76085eebef0e59cdf519dba047 691 SUPERFAMILY SSF52540 207 267 3.01E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10315 6cf5dc76085eebef0e59cdf519dba047 691 SUPERFAMILY SSF52540 16 123 3.01E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02405 965dca4c27df1a5de61145f7d0d9ba36 163 SUPERFAMILY SSF158668 2 157 2.75E-52 T 23-04-2016 VV93_RS02405 965dca4c27df1a5de61145f7d0d9ba36 163 Gene3D G3DSA:1.20.120.330 2 158 1.1E-60 T 23-04-2016 VV93_RS02405 965dca4c27df1a5de61145f7d0d9ba36 163 Pfam PF05068 Mannitol repressor 2 157 4.5E-57 T 23-04-2016 IPR007761 Mannitol repressor VV93_RS02405 965dca4c27df1a5de61145f7d0d9ba36 163 PANTHER PTHR37941 6 163 4.1E-38 T 23-04-2016 VV93_RS13425 5526107dada0078bb4ff4bd14617c487 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 103 150 6.4E-19 T 23-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VV93_RS13425 5526107dada0078bb4ff4bd14617c487 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 8.9E-60 T 23-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VV93_RS13425 5526107dada0078bb4ff4bd14617c487 153 Gene3D G3DSA:3.30.70.140 2 98 1.5E-36 T 23-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VV93_RS13425 5526107dada0078bb4ff4bd14617c487 153 SUPERFAMILY SSF54893 2 100 1.44E-35 T 23-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VV93_RS13425 5526107dada0078bb4ff4bd14617c487 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 1.0E-46 T 23-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VV93_RS13425 5526107dada0078bb4ff4bd14617c487 153 PANTHER PTHR35805:SF1 2 153 1.6E-71 T 23-04-2016 VV93_RS13425 5526107dada0078bb4ff4bd14617c487 153 SUPERFAMILY SSF57825 102 151 2.75E-16 T 23-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VV93_RS13425 5526107dada0078bb4ff4bd14617c487 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.774 T 23-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VV93_RS13425 5526107dada0078bb4ff4bd14617c487 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.3E-30 T 23-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VV93_RS13425 5526107dada0078bb4ff4bd14617c487 153 Gene3D G3DSA:2.30.30.20 102 152 4.6E-23 T 23-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VV93_RS13425 5526107dada0078bb4ff4bd14617c487 153 PANTHER PTHR35805 2 153 1.6E-71 T 23-04-2016 VV93_RS21020 5e2d897faf0915181a961706c56fc00b 69 PANTHER PTHR32294 9 69 5.1E-31 T 23-04-2016 VV93_RS21020 5e2d897faf0915181a961706c56fc00b 69 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 7 69 1.9E-18 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS21020 5e2d897faf0915181a961706c56fc00b 69 PANTHER PTHR32294:SF4 9 69 5.1E-31 T 23-04-2016 VV93_RS01720 0043fe049b426607ee9cffe95d0a06e2 350 PANTHER PTHR10366:SF360 11 265 2.6E-173 T 23-04-2016 VV93_RS01720 0043fe049b426607ee9cffe95d0a06e2 350 PANTHER PTHR10366:SF360 283 336 2.6E-173 T 23-04-2016 VV93_RS01720 0043fe049b426607ee9cffe95d0a06e2 350 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 290 337 8.5E-26 T 23-04-2016 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 VV93_RS01720 0043fe049b426607ee9cffe95d0a06e2 350 Gene3D G3DSA:3.40.50.720 10 183 1.3E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01720 0043fe049b426607ee9cffe95d0a06e2 350 Pfam PF02719 Polysaccharide biosynthesis protein 12 287 9.5E-107 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VV93_RS01720 0043fe049b426607ee9cffe95d0a06e2 350 PANTHER PTHR10366 11 265 2.6E-173 T 23-04-2016 VV93_RS01720 0043fe049b426607ee9cffe95d0a06e2 350 PANTHER PTHR10366 283 336 2.6E-173 T 23-04-2016 VV93_RS01720 0043fe049b426607ee9cffe95d0a06e2 350 Gene3D G3DSA:3.90.25.10 184 270 1.5E-10 T 23-04-2016 VV93_RS01720 0043fe049b426607ee9cffe95d0a06e2 350 SUPERFAMILY SSF51735 9 269 9.21E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS10985 a0fb28a2571439733c965b772346055d 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 160 174 1.1E-17 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VV93_RS10985 a0fb28a2571439733c965b772346055d 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 88 97 1.1E-17 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VV93_RS10985 a0fb28a2571439733c965b772346055d 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 188 200 1.1E-17 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VV93_RS10985 a0fb28a2571439733c965b772346055d 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 209 221 1.1E-17 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VV93_RS10985 a0fb28a2571439733c965b772346055d 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 1.1E-17 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VV93_RS10985 a0fb28a2571439733c965b772346055d 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 277 287 1.1E-17 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VV93_RS10985 a0fb28a2571439733c965b772346055d 289 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 92 287 1.3E-82 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VV93_RS10985 a0fb28a2571439733c965b772346055d 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 129 148 5.1E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VV93_RS10985 a0fb28a2571439733c965b772346055d 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 236 5.1E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VV93_RS10985 a0fb28a2571439733c965b772346055d 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 261 286 5.1E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VV93_RS10985 a0fb28a2571439733c965b772346055d 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 109 129 5.1E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VV93_RS10985 a0fb28a2571439733c965b772346055d 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 90 109 5.1E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VV93_RS10985 a0fb28a2571439733c965b772346055d 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 237 258 5.1E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VV93_RS10985 a0fb28a2571439733c965b772346055d 289 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 216 231 - T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VV93_RS10985 a0fb28a2571439733c965b772346055d 289 Pfam PF00813 FliP family 92 283 8.0E-80 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VV93_RS10985 a0fb28a2571439733c965b772346055d 289 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 264 276 - T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VV93_RS10985 a0fb28a2571439733c965b772346055d 289 PANTHER PTHR30587:SF0 76 289 7.4E-121 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VV93_RS10985 a0fb28a2571439733c965b772346055d 289 PANTHER PTHR30587 76 289 7.4E-121 T 23-04-2016 VV93_RS00665 b6cbae2870f130be36459318d55ab710 392 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.6E-7 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV93_RS00665 b6cbae2870f130be36459318d55ab710 392 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.6E-7 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV93_RS00665 b6cbae2870f130be36459318d55ab710 392 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.6E-7 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV93_RS00665 b6cbae2870f130be36459318d55ab710 392 Pfam PF13649 Methyltransferase domain 188 282 3.2E-17 T 23-04-2016 VV93_RS00665 b6cbae2870f130be36459318d55ab710 392 SUPERFAMILY SSF46955 2 103 5.13E-22 T 23-04-2016 IPR009061 Putative DNA-binding domain VV93_RS00665 b6cbae2870f130be36459318d55ab710 392 Pfam PF13411 MerR HTH family regulatory protein 2 69 7.6E-18 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV93_RS00665 b6cbae2870f130be36459318d55ab710 392 Gene3D G3DSA:1.10.1660.10 56 103 4.8E-4 T 23-04-2016 VV93_RS00665 b6cbae2870f130be36459318d55ab710 392 Gene3D G3DSA:3.40.50.150 151 388 1.9E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00665 b6cbae2870f130be36459318d55ab710 392 PANTHER PTHR10108 47 384 5.4E-39 T 23-04-2016 VV93_RS00665 b6cbae2870f130be36459318d55ab710 392 PANTHER PTHR10108:SF855 47 384 5.4E-39 T 23-04-2016 VV93_RS00665 b6cbae2870f130be36459318d55ab710 392 SUPERFAMILY SSF53335 130 355 8.86E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00665 b6cbae2870f130be36459318d55ab710 392 SMART SM00422 2 70 1.1E-24 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV93_RS00665 b6cbae2870f130be36459318d55ab710 392 Gene3D G3DSA:1.10.1660.10 1 55 8.5E-22 T 23-04-2016 VV93_RS07320 a787ed03dbf439467b0dc2cc1d6b86d3 513 PANTHER PTHR35342 1 508 1.4E-295 T 23-04-2016 VV93_RS07320 a787ed03dbf439467b0dc2cc1d6b86d3 513 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 2.2E-140 T 23-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane VV93_RS07320 a787ed03dbf439467b0dc2cc1d6b86d3 513 PANTHER PTHR35342:SF2 1 508 1.4E-295 T 23-04-2016 VV93_RS12275 3447e47c1d4980544692625facd3423f 157 Gene3D G3DSA:1.10.287.180 1 74 4.6E-28 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VV93_RS12275 3447e47c1d4980544692625facd3423f 157 SUPERFAMILY SSF54534 81 156 7.98E-24 T 23-04-2016 VV93_RS12275 3447e47c1d4980544692625facd3423f 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VV93_RS12275 3447e47c1d4980544692625facd3423f 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 7.0E-28 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VV93_RS12275 3447e47c1d4980544692625facd3423f 157 PIRSF PIRSF006092 1 157 3.6E-48 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VV93_RS12275 3447e47c1d4980544692625facd3423f 157 SUPERFAMILY SSF46557 2 75 5.49E-25 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VV93_RS12275 3447e47c1d4980544692625facd3423f 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VV93_RS12275 3447e47c1d4980544692625facd3423f 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 31.554 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VV93_RS12275 3447e47c1d4980544692625facd3423f 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 9.3E-25 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VV93_RS12275 3447e47c1d4980544692625facd3423f 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 5.3E-54 T 23-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 VV93_RS12275 3447e47c1d4980544692625facd3423f 157 PANTHER PTHR30437 1 157 1.0E-64 T 23-04-2016 VV93_RS12275 3447e47c1d4980544692625facd3423f 157 Gene3D G3DSA:3.10.50.30 78 156 7.4E-32 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VV93_RS06980 b01e3af6dec891e859187c4b218ed0ac 573 PANTHER PTHR24222 1 573 2.4E-236 T 23-04-2016 VV93_RS06980 b01e3af6dec891e859187c4b218ed0ac 573 Gene3D G3DSA:3.40.50.300 339 568 9.0E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06980 b01e3af6dec891e859187c4b218ed0ac 573 Pfam PF00664 ABC transporter transmembrane region 24 285 3.1E-8 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VV93_RS06980 b01e3af6dec891e859187c4b218ed0ac 573 SMART SM00382 365 549 8.6E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS06980 b01e3af6dec891e859187c4b218ed0ac 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 8 533 1.0E-136 T 23-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 VV93_RS06980 b01e3af6dec891e859187c4b218ed0ac 573 Pfam PF00005 ABC transporter 356 502 8.4E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS06980 b01e3af6dec891e859187c4b218ed0ac 573 SUPERFAMILY SSF52540 334 571 2.07E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06980 b01e3af6dec891e859187c4b218ed0ac 573 SUPERFAMILY SSF90123 7 318 2.49E-37 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VV93_RS06980 b01e3af6dec891e859187c4b218ed0ac 573 PANTHER PTHR24222:SF30 1 573 2.4E-236 T 23-04-2016 VV93_RS06980 b01e3af6dec891e859187c4b218ed0ac 573 Gene3D G3DSA:1.20.1560.10 7 322 2.6E-27 T 23-04-2016 VV93_RS06980 b01e3af6dec891e859187c4b218ed0ac 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS09565 89406cd2677a62afd3de6317412f454b 215 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 20 215 38.487 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VV93_RS09565 89406cd2677a62afd3de6317412f454b 215 Pfam PF00925 GTP cyclohydrolase II 36 188 4.4E-58 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VV93_RS09565 89406cd2677a62afd3de6317412f454b 215 PANTHER PTHR21327 38 215 1.6E-74 T 23-04-2016 VV93_RS09565 89406cd2677a62afd3de6317412f454b 215 PANTHER PTHR21327:SF6 38 215 1.6E-74 T 23-04-2016 VV93_RS09565 89406cd2677a62afd3de6317412f454b 215 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 40 212 7.3E-62 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VV93_RS09565 89406cd2677a62afd3de6317412f454b 215 SUPERFAMILY SSF142695 36 189 9.42E-54 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VV93_RS07750 8aa7d198288bc6bbba59722981e1257a 885 Pfam PF02470 MlaD protein 399 470 2.9E-6 T 23-04-2016 IPR003399 Mce/MlaD VV93_RS07750 8aa7d198288bc6bbba59722981e1257a 885 Pfam PF02470 MlaD protein 47 138 7.6E-14 T 23-04-2016 IPR003399 Mce/MlaD VV93_RS07750 8aa7d198288bc6bbba59722981e1257a 885 Pfam PF02470 MlaD protein 163 223 1.1E-6 T 23-04-2016 IPR003399 Mce/MlaD VV93_RS07750 8aa7d198288bc6bbba59722981e1257a 885 Pfam PF02470 MlaD protein 283 374 1.1E-6 T 23-04-2016 IPR003399 Mce/MlaD VV93_RS07750 8aa7d198288bc6bbba59722981e1257a 885 Pfam PF02470 MlaD protein 756 832 1.3E-6 T 23-04-2016 IPR003399 Mce/MlaD VV93_RS07750 8aa7d198288bc6bbba59722981e1257a 885 PANTHER PTHR30462 1 884 0.0 T 23-04-2016 VV93_RS07750 8aa7d198288bc6bbba59722981e1257a 885 PANTHER PTHR30462:SF0 1 884 0.0 T 23-04-2016 VV93_RS09615 36a133bc35863cdf5effd5618a4fe610 321 SUPERFAMILY SSF53822 42 253 3.53E-20 T 23-04-2016 IPR028082 Periplasmic binding protein-like I VV93_RS09615 36a133bc35863cdf5effd5618a4fe610 321 Gene3D G3DSA:3.40.50.2300 156 287 3.4E-48 T 23-04-2016 VV93_RS09615 36a133bc35863cdf5effd5618a4fe610 321 PANTHER PTHR35271 1 321 6.1E-74 T 23-04-2016 VV93_RS09615 36a133bc35863cdf5effd5618a4fe610 321 Pfam PF04392 ABC transporter substrate binding protein 29 321 2.4E-115 T 23-04-2016 IPR007487 ABC transporter, substrate-binding protein VV93_RS09615 36a133bc35863cdf5effd5618a4fe610 321 Gene3D G3DSA:3.40.50.2300 26 155 1.5E-58 T 23-04-2016 VV93_RS05115 616cb8dab92eefbee95796f7d61ba06b 514 Gene3D G3DSA:1.20.200.10 204 511 2.1E-103 T 23-04-2016 VV93_RS05115 616cb8dab92eefbee95796f7d61ba06b 514 SUPERFAMILY SSF48557 4 511 2.35E-172 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 VV93_RS05115 616cb8dab92eefbee95796f7d61ba06b 514 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 145 161 - T 23-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 VV93_RS05115 616cb8dab92eefbee95796f7d61ba06b 514 PANTHER PTHR10362 3 511 7.2E-187 T 23-04-2016 VV93_RS05115 616cb8dab92eefbee95796f7d61ba06b 514 Pfam PF00221 Aromatic amino acid lyase 16 466 2.2E-162 T 23-04-2016 IPR001106 Aromatic amino acid lyase VV93_RS05115 616cb8dab92eefbee95796f7d61ba06b 514 Gene3D G3DSA:1.10.275.10 3 203 4.6E-63 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal VV93_RS05115 616cb8dab92eefbee95796f7d61ba06b 514 PANTHER PTHR10362:SF7 3 511 7.2E-187 T 23-04-2016 VV93_RS01675 02ed26211fba643254012fe67e499296 119 PANTHER PTHR38471:SF2 3 115 1.2E-40 T 23-04-2016 VV93_RS01675 02ed26211fba643254012fe67e499296 119 Gene3D G3DSA:1.20.1440.60 6 112 3.1E-32 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein VV93_RS01675 02ed26211fba643254012fe67e499296 119 PANTHER PTHR38471 3 115 1.2E-40 T 23-04-2016 VV93_RS01675 02ed26211fba643254012fe67e499296 119 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 11 112 6.6E-32 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein VV93_RS01675 02ed26211fba643254012fe67e499296 119 SUPERFAMILY SSF158446 4 112 1.15E-33 T 23-04-2016 VV93_RS01675 02ed26211fba643254012fe67e499296 119 Pfam PF05635 23S rRNA-intervening sequence protein 7 108 3.7E-31 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein VV93_RS06930 8c1933f9be3b9b2248e80a624149b2e0 553 Gene3D G3DSA:3.40.640.10 116 395 3.8E-88 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS06930 8c1933f9be3b9b2248e80a624149b2e0 553 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 1.5E-294 T 23-04-2016 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent VV93_RS06930 8c1933f9be3b9b2248e80a624149b2e0 553 PANTHER PTHR11999 51 528 3.0E-157 T 23-04-2016 VV93_RS06930 8c1933f9be3b9b2248e80a624149b2e0 553 Gene3D G3DSA:3.90.1150.10 396 527 2.0E-36 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS06930 8c1933f9be3b9b2248e80a624149b2e0 553 SUPERFAMILY SSF53383 27 527 1.13E-114 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS06930 8c1933f9be3b9b2248e80a624149b2e0 553 PANTHER PTHR11999:SF5 51 528 3.0E-157 T 23-04-2016 VV93_RS06930 8c1933f9be3b9b2248e80a624149b2e0 553 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 65 442 5.9E-56 T 23-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VV93_RS03980 d57ec6d5647e84d133e2bd499e15361d 529 SUPERFAMILY SSF53850 44 286 6.0E-33 T 23-04-2016 VV93_RS03980 d57ec6d5647e84d133e2bd499e15361d 529 Pfam PF01464 Transglycosylase SLT domain 318 419 4.0E-21 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 VV93_RS03980 d57ec6d5647e84d133e2bd499e15361d 529 SUPERFAMILY SSF53955 265 416 6.91E-36 T 23-04-2016 IPR023346 Lysozyme-like domain VV93_RS03980 d57ec6d5647e84d133e2bd499e15361d 529 SUPERFAMILY SSF53955 451 468 6.91E-36 T 23-04-2016 IPR023346 Lysozyme-like domain VV93_RS03980 d57ec6d5647e84d133e2bd499e15361d 529 Gene3D G3DSA:1.10.530.10 307 478 7.0E-37 T 23-04-2016 VV93_RS03980 d57ec6d5647e84d133e2bd499e15361d 529 Gene3D G3DSA:3.40.190.10 20 146 1.5E-17 T 23-04-2016 VV93_RS03980 d57ec6d5647e84d133e2bd499e15361d 529 PANTHER PTHR21666 292 484 1.1E-122 T 23-04-2016 VV93_RS03980 d57ec6d5647e84d133e2bd499e15361d 529 SMART SM00062 43 287 3.9E-21 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV93_RS03980 d57ec6d5647e84d133e2bd499e15361d 529 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 286 1.3E-27 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV93_RS03980 d57ec6d5647e84d133e2bd499e15361d 529 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 328 356 - T 23-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VV93_RS03980 d57ec6d5647e84d133e2bd499e15361d 529 PANTHER PTHR21666:SF215 292 484 1.1E-122 T 23-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 VV93_RS03980 d57ec6d5647e84d133e2bd499e15361d 529 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 9 494 47.982 T 23-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 VV93_RS05735 0d4fe8f4d3cda7c2703a0a08dd7b0387 296 Pfam PF01933 Uncharacterised protein family UPF0052 9 283 2.5E-75 T 23-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 VV93_RS05735 0d4fe8f4d3cda7c2703a0a08dd7b0387 296 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.879 T 23-04-2016 IPR010119 Gluconeogenesis factor VV93_RS05735 0d4fe8f4d3cda7c2703a0a08dd7b0387 296 Gene3D G3DSA:3.40.50.10680 79 294 4.9E-54 T 23-04-2016 VV93_RS05735 0d4fe8f4d3cda7c2703a0a08dd7b0387 296 SUPERFAMILY SSF142338 7 290 7.06E-83 T 23-04-2016 VV93_RS05735 0d4fe8f4d3cda7c2703a0a08dd7b0387 296 PANTHER PTHR30135 8 260 4.3E-110 T 23-04-2016 VV93_RS05735 0d4fe8f4d3cda7c2703a0a08dd7b0387 296 PANTHER PTHR30135:SF3 8 260 4.3E-110 T 23-04-2016 VV93_RS05735 0d4fe8f4d3cda7c2703a0a08dd7b0387 296 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 283 1.3E-103 T 23-04-2016 IPR010119 Gluconeogenesis factor VV93_RS11520 0a343e9fb332e55e3e30be65e6c4d794 167 Gene3D G3DSA:3.40.630.30 4 145 1.5E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS11520 0a343e9fb332e55e3e30be65e6c4d794 167 PANTHER PTHR13256:SF10 1 148 5.8E-23 T 23-04-2016 VV93_RS11520 0a343e9fb332e55e3e30be65e6c4d794 167 PANTHER PTHR13256 1 148 5.8E-23 T 23-04-2016 VV93_RS11520 0a343e9fb332e55e3e30be65e6c4d794 167 Pfam PF13302 Acetyltransferase (GNAT) domain 34 138 2.8E-17 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS11520 0a343e9fb332e55e3e30be65e6c4d794 167 SUPERFAMILY SSF55729 2 141 1.02E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS04645 a6d3e053ef91435a421ab798b30efe5b 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 5.3E-124 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VV93_RS04645 a6d3e053ef91435a421ab798b30efe5b 574 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VV93_RS04645 a6d3e053ef91435a421ab798b30efe5b 574 SUPERFAMILY SSF51621 249 549 4.45E-110 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS04645 a6d3e053ef91435a421ab798b30efe5b 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 2.6E-30 T 23-04-2016 VV93_RS04645 a6d3e053ef91435a421ab798b30efe5b 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 2.6E-30 T 23-04-2016 VV93_RS04645 a6d3e053ef91435a421ab798b30efe5b 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.6E-30 T 23-04-2016 VV93_RS04645 a6d3e053ef91435a421ab798b30efe5b 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 2.6E-30 T 23-04-2016 VV93_RS04645 a6d3e053ef91435a421ab798b30efe5b 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 7.3E-247 T 23-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VV93_RS04645 a6d3e053ef91435a421ab798b30efe5b 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.1E-31 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VV93_RS04645 a6d3e053ef91435a421ab798b30efe5b 574 SUPERFAMILY SSF47831 24 143 1.1E-32 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VV93_RS04645 a6d3e053ef91435a421ab798b30efe5b 574 SUPERFAMILY SSF52009 125 243 9.29E-35 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VV93_RS04645 a6d3e053ef91435a421ab798b30efe5b 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.6E-20 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VV93_RS04645 a6d3e053ef91435a421ab798b30efe5b 574 PANTHER PTHR22931 66 550 2.6E-213 T 23-04-2016 VV93_RS04645 a6d3e053ef91435a421ab798b30efe5b 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VV93_RS04645 a6d3e053ef91435a421ab798b30efe5b 574 Gene3D G3DSA:3.50.30.10 133 254 2.4E-38 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VV93_RS04645 a6d3e053ef91435a421ab798b30efe5b 574 PIRSF PIRSF000732 1 574 1.6E-219 T 23-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 VV93_RS04645 a6d3e053ef91435a421ab798b30efe5b 574 Gene3D G3DSA:1.10.274.10 23 132 2.4E-37 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VV93_RS04645 a6d3e053ef91435a421ab798b30efe5b 574 Gene3D G3DSA:3.20.20.60 255 572 4.0E-114 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS11150 4e14cfa83b59f0f5c3b3af2e269a76d1 180 Gene3D G3DSA:3.30.70.260 1 83 8.0E-27 T 23-04-2016 VV93_RS11150 4e14cfa83b59f0f5c3b3af2e269a76d1 180 PANTHER PTHR34875 1 179 2.3E-54 T 23-04-2016 VV93_RS11150 4e14cfa83b59f0f5c3b3af2e269a76d1 180 Pfam PF13740 ACT domain 3 78 7.3E-25 T 23-04-2016 VV93_RS11150 4e14cfa83b59f0f5c3b3af2e269a76d1 180 PIRSF PIRSF028103 1 178 1.4E-63 T 23-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VV93_RS11150 4e14cfa83b59f0f5c3b3af2e269a76d1 180 PANTHER PTHR34875:SF3 1 179 2.3E-54 T 23-04-2016 VV93_RS11150 4e14cfa83b59f0f5c3b3af2e269a76d1 180 SUPERFAMILY SSF55021 1 82 3.21E-17 T 23-04-2016 VV93_RS11150 4e14cfa83b59f0f5c3b3af2e269a76d1 180 SUPERFAMILY SSF55021 88 176 1.83E-20 T 23-04-2016 VV93_RS11150 4e14cfa83b59f0f5c3b3af2e269a76d1 180 Gene3D G3DSA:3.30.70.260 88 178 3.4E-36 T 23-04-2016 VV93_RS05185 c4ce69fac058d4a4be82f8bbc473e015 490 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 459 1.8E-154 T 23-04-2016 IPR003846 Uncharacterised protein family UPF0061 VV93_RS05185 c4ce69fac058d4a4be82f8bbc473e015 490 PANTHER PTHR32057 16 490 2.2E-190 T 23-04-2016 VV93_RS05185 c4ce69fac058d4a4be82f8bbc473e015 490 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 476 44.457 T 23-04-2016 IPR003846 Uncharacterised protein family UPF0061 VV93_RS03100 941704b08753e8105f09cba010a07b9a 227 SMART SM00927 53 151 3.1E-64 T 23-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VV93_RS03100 941704b08753e8105f09cba010a07b9a 227 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 4 219 7.8E-100 T 23-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VV93_RS03100 941704b08753e8105f09cba010a07b9a 227 SUPERFAMILY SSF52980 2 220 4.5E-83 T 23-04-2016 IPR011335 Restriction endonuclease type II-like VV93_RS03100 941704b08753e8105f09cba010a07b9a 227 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 8.8E-34 T 23-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VV93_RS03100 941704b08753e8105f09cba010a07b9a 227 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 227 148.817 T 23-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VV93_RS03100 941704b08753e8105f09cba010a07b9a 227 Gene3D G3DSA:3.40.600.10 5 220 3.5E-79 T 23-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VV93_RS15210 c7d286438abad2d6719cfea0e1aa8e3e 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 3.3E-63 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VV93_RS15210 c7d286438abad2d6719cfea0e1aa8e3e 177 Gene3D G3DSA:1.10.520.20 2 106 2.3E-34 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain VV93_RS15210 c7d286438abad2d6719cfea0e1aa8e3e 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 23-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 VV93_RS15210 c7d286438abad2d6719cfea0e1aa8e3e 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 2.6E-53 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VV93_RS15210 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 4.6E-27 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VV93_RS15210 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.6E-27 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VV93_RS15210 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 4.6E-27 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VV93_RS15210 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 4.6E-27 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VV93_RS15210 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.6E-27 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VV93_RS15210 c7d286438abad2d6719cfea0e1aa8e3e 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.713 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VV93_RS15210 c7d286438abad2d6719cfea0e1aa8e3e 177 PANTHER PTHR11910 4 176 1.6E-55 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VV93_RS15210 c7d286438abad2d6719cfea0e1aa8e3e 177 SUPERFAMILY SSF47928 4 105 2.62E-28 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain VV93_RS09830 ef6f3858b1e2444af9cf45c119158a8c 423 Gene3D G3DSA:1.10.287.130 219 278 6.0E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS09830 ef6f3858b1e2444af9cf45c119158a8c 423 PANTHER PTHR24423 167 403 6.2E-22 T 23-04-2016 VV93_RS09830 ef6f3858b1e2444af9cf45c119158a8c 423 SUPERFAMILY SSF55874 297 406 1.7E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS09830 ef6f3858b1e2444af9cf45c119158a8c 423 SUPERFAMILY SSF47384 209 290 1.47E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS09830 ef6f3858b1e2444af9cf45c119158a8c 423 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 288 1.9E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS09830 ef6f3858b1e2444af9cf45c119158a8c 423 Gene3D G3DSA:3.30.565.10 279 361 1.1E-4 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS09830 ef6f3858b1e2444af9cf45c119158a8c 423 SMART SM00388 226 295 4.8E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS05175 fd3db8554103dae4e6675d35af3811a8 1005 SUPERFAMILY SSF55486 283 356 7.33E-5 T 23-04-2016 VV93_RS05175 fd3db8554103dae4e6675d35af3811a8 1005 Gene3D G3DSA:3.40.390.10 295 369 5.9E-7 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 VV93_RS05175 fd3db8554103dae4e6675d35af3811a8 1005 PANTHER PTHR22935:SF68 309 487 3.1E-12 T 23-04-2016 VV93_RS05175 fd3db8554103dae4e6675d35af3811a8 1005 SUPERFAMILY SSF49299 779 877 3.92E-5 T 23-04-2016 IPR000601 PKD domain VV93_RS05175 fd3db8554103dae4e6675d35af3811a8 1005 PIRSF PIRSF036597 1 1002 0.0 T 23-04-2016 IPR012045 Peptidase M6, unassigned InhA-related VV93_RS05175 fd3db8554103dae4e6675d35af3811a8 1005 ProSitePatterns PS00018 EF-hand calcium-binding domain. 245 257 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site VV93_RS05175 fd3db8554103dae4e6675d35af3811a8 1005 PANTHER PTHR22935 309 487 3.1E-12 T 23-04-2016 VV93_RS05175 fd3db8554103dae4e6675d35af3811a8 1005 Pfam PF05547 Immune inhibitor A peptidase M6 172 377 5.9E-12 T 23-04-2016 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VV93_RS05175 fd3db8554103dae4e6675d35af3811a8 1005 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 148 433 2.5E-73 T 23-04-2016 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VV93_RS07710 242f8ceb2d4ad6ff27c486242f57d357 280 PANTHER PTHR10459 42 277 1.8E-60 T 23-04-2016 VV93_RS07710 242f8ceb2d4ad6ff27c486242f57d357 280 Pfam PF14743 DNA ligase OB-like domain 212 277 2.5E-26 T 23-04-2016 IPR029319 DNA ligase, OB-like domain VV93_RS07710 242f8ceb2d4ad6ff27c486242f57d357 280 PANTHER PTHR10459:SF61 42 277 1.8E-60 T 23-04-2016 VV93_RS07710 242f8ceb2d4ad6ff27c486242f57d357 280 Gene3D G3DSA:2.40.50.140 185 277 6.3E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS07710 242f8ceb2d4ad6ff27c486242f57d357 280 Gene3D G3DSA:3.30.1490.70 29 50 7.9E-7 T 23-04-2016 VV93_RS07710 242f8ceb2d4ad6ff27c486242f57d357 280 Gene3D G3DSA:3.30.1490.70 151 184 7.9E-7 T 23-04-2016 VV93_RS07710 242f8ceb2d4ad6ff27c486242f57d357 280 SUPERFAMILY SSF56091 27 198 2.07E-38 T 23-04-2016 VV93_RS07710 242f8ceb2d4ad6ff27c486242f57d357 280 Pfam PF01068 ATP dependent DNA ligase domain 41 198 2.7E-7 T 23-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 VV93_RS07710 242f8ceb2d4ad6ff27c486242f57d357 280 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 175 198 - T 23-04-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Reactome: REACT_216 VV93_RS07710 242f8ceb2d4ad6ff27c486242f57d357 280 SUPERFAMILY SSF50249 173 277 2.23E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS08700 0981f48f9bd49837146bdcf6aead8d8c 235 SUPERFAMILY SSF64288 95 231 4.71E-39 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VV93_RS08700 0981f48f9bd49837146bdcf6aead8d8c 235 Pfam PF07702 UTRA domain 92 228 4.6E-35 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VV93_RS08700 0981f48f9bd49837146bdcf6aead8d8c 235 PANTHER PTHR11751:SF364 1 94 7.5E-34 T 23-04-2016 VV93_RS08700 0981f48f9bd49837146bdcf6aead8d8c 235 Gene3D G3DSA:3.40.1410.10 89 224 7.6E-46 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VV93_RS08700 0981f48f9bd49837146bdcf6aead8d8c 235 PANTHER PTHR11751 1 94 7.5E-34 T 23-04-2016 VV93_RS08700 0981f48f9bd49837146bdcf6aead8d8c 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 1.5E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV93_RS08700 0981f48f9bd49837146bdcf6aead8d8c 235 Gene3D G3DSA:1.10.10.10 3 73 1.5E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS08700 0981f48f9bd49837146bdcf6aead8d8c 235 SMART SM00866 91 228 5.3E-32 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VV93_RS08700 0981f48f9bd49837146bdcf6aead8d8c 235 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 233 1.0E-90 T 23-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 VV93_RS08700 0981f48f9bd49837146bdcf6aead8d8c 235 SUPERFAMILY SSF46785 3 72 5.09E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS08700 0981f48f9bd49837146bdcf6aead8d8c 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.1E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV93_RS08700 0981f48f9bd49837146bdcf6aead8d8c 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.1E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV93_RS08700 0981f48f9bd49837146bdcf6aead8d8c 235 SMART SM00345 9 68 1.3E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV93_RS05080 278611f15c3eaa41853f68d1d74f6844 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 1.1E-124 T 23-04-2016 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VV93_RS05080 278611f15c3eaa41853f68d1d74f6844 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 1.5E-57 T 23-04-2016 VV93_RS05080 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS05080 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS05080 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS05080 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 3.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS05080 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS05080 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS05080 278611f15c3eaa41853f68d1d74f6844 241 PANTHER PTHR24322 153 185 4.5E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS05080 278611f15c3eaa41853f68d1d74f6844 241 PANTHER PTHR24322 7 137 4.5E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS05080 278611f15c3eaa41853f68d1d74f6844 241 SUPERFAMILY SSF51735 3 240 1.64E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS05080 278611f15c3eaa41853f68d1d74f6844 241 PANTHER PTHR24322:SF635 153 185 4.5E-48 T 23-04-2016 VV93_RS05080 278611f15c3eaa41853f68d1d74f6844 241 PANTHER PTHR24322:SF635 7 137 4.5E-48 T 23-04-2016 VV93_RS05080 278611f15c3eaa41853f68d1d74f6844 241 Gene3D G3DSA:3.40.50.720 4 240 8.7E-75 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS05080 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS05080 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS05080 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS08980 67b22e688bac2ece0f5de0063553df24 246 PANTHER PTHR23083 27 226 1.4E-17 T 23-04-2016 VV93_RS08980 67b22e688bac2ece0f5de0063553df24 246 SMART SM00028 28 61 1.5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS08980 67b22e688bac2ece0f5de0063553df24 246 SMART SM00028 97 130 19.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS08980 67b22e688bac2ece0f5de0063553df24 246 SMART SM00028 131 164 0.39 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS08980 67b22e688bac2ece0f5de0063553df24 246 SUPERFAMILY SSF48452 27 193 9.48E-20 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS08980 67b22e688bac2ece0f5de0063553df24 246 Gene3D G3DSA:1.25.40.10 28 223 4.0E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS06330 f8fa0545412bf38a9cefd076dcc042e2 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS06330 f8fa0545412bf38a9cefd076dcc042e2 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS06330 f8fa0545412bf38a9cefd076dcc042e2 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS06330 f8fa0545412bf38a9cefd076dcc042e2 324 SUPERFAMILY SSF53850 91 321 5.07E-41 T 23-04-2016 VV93_RS06330 f8fa0545412bf38a9cefd076dcc042e2 324 Gene3D G3DSA:1.10.10.10 1 81 2.4E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS06330 f8fa0545412bf38a9cefd076dcc042e2 324 PANTHER PTHR30126:SF6 1 309 2.3E-213 T 23-04-2016 VV93_RS06330 f8fa0545412bf38a9cefd076dcc042e2 324 Gene3D G3DSA:3.40.190.10 184 260 3.7E-30 T 23-04-2016 VV93_RS06330 f8fa0545412bf38a9cefd076dcc042e2 324 PANTHER PTHR30126 1 309 2.3E-213 T 23-04-2016 VV93_RS06330 f8fa0545412bf38a9cefd076dcc042e2 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 6.0E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS06330 f8fa0545412bf38a9cefd076dcc042e2 324 SUPERFAMILY SSF46785 1 113 7.07E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS06330 f8fa0545412bf38a9cefd076dcc042e2 324 Gene3D G3DSA:3.40.190.10 91 183 1.8E-19 T 23-04-2016 VV93_RS06330 f8fa0545412bf38a9cefd076dcc042e2 324 Pfam PF03466 LysR substrate binding domain 91 292 1.9E-38 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS11390 1be204a987af8e5868cbe655c4372e89 104 PANTHER PTHR33751 14 104 3.2E-26 T 23-04-2016 VV93_RS11390 1be204a987af8e5868cbe655c4372e89 104 Pfam PF00034 Cytochrome c 30 104 2.6E-9 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS11390 1be204a987af8e5868cbe655c4372e89 104 Gene3D G3DSA:1.10.760.10 21 104 7.5E-27 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS11390 1be204a987af8e5868cbe655c4372e89 104 SUPERFAMILY SSF46626 17 103 1.33E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS11390 1be204a987af8e5868cbe655c4372e89 104 PANTHER PTHR33751:SF3 14 104 3.2E-26 T 23-04-2016 VV93_RS12940 64988a8721523ba729331b955ac05639 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 5.4E-58 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VV93_RS12940 64988a8721523ba729331b955ac05639 218 PANTHER PTHR11934:SF11 1 218 3.4E-141 T 23-04-2016 VV93_RS12940 64988a8721523ba729331b955ac05639 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 1.3E-68 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VV93_RS12940 64988a8721523ba729331b955ac05639 218 Gene3D G3DSA:3.30.70.260 137 196 9.1E-30 T 23-04-2016 VV93_RS12940 64988a8721523ba729331b955ac05639 218 SUPERFAMILY SSF75445 127 198 5.49E-24 T 23-04-2016 VV93_RS12940 64988a8721523ba729331b955ac05639 218 PANTHER PTHR11934 1 218 3.4E-141 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VV93_RS12940 64988a8721523ba729331b955ac05639 218 Gene3D G3DSA:3.40.50.1360 1 136 5.2E-58 T 23-04-2016 VV93_RS12940 64988a8721523ba729331b955ac05639 218 SUPERFAMILY SSF100950 1 146 1.49E-46 T 23-04-2016 VV93_RS12940 64988a8721523ba729331b955ac05639 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.919 T 23-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VV93_RS09685 240578cf8980ab78c603e0909d9e63c6 279 SUPERFAMILY SSF46689 220 265 5.82E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS09685 240578cf8980ab78c603e0909d9e63c6 279 Gene3D G3DSA:1.10.10.60 165 221 3.1E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS09685 240578cf8980ab78c603e0909d9e63c6 279 Gene3D G3DSA:2.60.120.280 34 150 2.8E-6 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VV93_RS09685 240578cf8980ab78c603e0909d9e63c6 279 Pfam PF12833 Helix-turn-helix domain 190 266 1.6E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV93_RS09685 240578cf8980ab78c603e0909d9e63c6 279 PANTHER PTHR11019:SF77 39 274 5.6E-38 T 23-04-2016 VV93_RS09685 240578cf8980ab78c603e0909d9e63c6 279 SMART SM00342 184 266 8.0E-24 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV93_RS09685 240578cf8980ab78c603e0909d9e63c6 279 PANTHER PTHR11019 39 274 5.6E-38 T 23-04-2016 VV93_RS09685 240578cf8980ab78c603e0909d9e63c6 279 Gene3D G3DSA:1.10.10.60 222 265 3.4E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS09685 240578cf8980ab78c603e0909d9e63c6 279 SUPERFAMILY SSF51215 31 150 3.4E-7 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VV93_RS09685 240578cf8980ab78c603e0909d9e63c6 279 Pfam PF12852 Cupin 2 153 9.1E-21 T 23-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain VV93_RS09685 240578cf8980ab78c603e0909d9e63c6 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 262 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV93_RS09685 240578cf8980ab78c603e0909d9e63c6 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 169 213 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV93_RS09685 240578cf8980ab78c603e0909d9e63c6 279 SUPERFAMILY SSF46689 167 218 1.75E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14475 d776d46c063259183c09fab216694503 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 4.6E-26 T 23-04-2016 IPR000362 Fumarate lyase family VV93_RS14475 d776d46c063259183c09fab216694503 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 4.6E-26 T 23-04-2016 IPR000362 Fumarate lyase family VV93_RS14475 d776d46c063259183c09fab216694503 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 4.6E-26 T 23-04-2016 IPR000362 Fumarate lyase family VV93_RS14475 d776d46c063259183c09fab216694503 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 4.6E-26 T 23-04-2016 IPR000362 Fumarate lyase family VV93_RS14475 d776d46c063259183c09fab216694503 483 Gene3D G3DSA:1.10.40.30 421 471 3.2E-19 T 23-04-2016 VV93_RS14475 d776d46c063259183c09fab216694503 483 Gene3D G3DSA:1.10.275.10 15 152 4.6E-56 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal VV93_RS14475 d776d46c063259183c09fab216694503 483 Pfam PF10415 Fumarase C C-terminus 421 473 4.4E-17 T 23-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 VV93_RS14475 d776d46c063259183c09fab216694503 483 Gene3D G3DSA:1.20.200.10 153 415 3.1E-87 T 23-04-2016 VV93_RS14475 d776d46c063259183c09fab216694503 483 Pfam PF00206 Lyase 23 355 2.4E-106 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal VV93_RS14475 d776d46c063259183c09fab216694503 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VV93_RS14475 d776d46c063259183c09fab216694503 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 1.6E-254 T 23-04-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 VV93_RS14475 d776d46c063259183c09fab216694503 483 SUPERFAMILY SSF48557 14 467 1.28E-143 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 VV93_RS14475 d776d46c063259183c09fab216694503 483 PANTHER PTHR11444 3 482 2.0E-294 T 23-04-2016 IPR000362 Fumarate lyase family VV93_RS14475 d776d46c063259183c09fab216694503 483 PANTHER PTHR11444:SF25 3 482 2.0E-294 T 23-04-2016 VV93_RS08620 d41dd566576d3ab662a4d7ab3ce178c4 129 SUPERFAMILY SSF54593 2 125 1.25E-16 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS08620 d41dd566576d3ab662a4d7ab3ce178c4 129 Gene3D G3DSA:3.10.180.10 1 122 2.2E-18 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS08620 d41dd566576d3ab662a4d7ab3ce178c4 129 PANTHER PTHR35006:SF1 1 129 1.1E-77 T 23-04-2016 VV93_RS08620 d41dd566576d3ab662a4d7ab3ce178c4 129 PANTHER PTHR35006 1 129 1.1E-77 T 23-04-2016 VV93_RS14010 a5cbda310e39f5e8722bb1da7385bf97 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 9.5E-72 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VV93_RS14010 a5cbda310e39f5e8722bb1da7385bf97 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.12 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VV93_RS14010 a5cbda310e39f5e8722bb1da7385bf97 156 SUPERFAMILY SSF47973 6 149 4.97E-60 T 23-04-2016 IPR023798 Ribosomal protein S7 domain VV93_RS14010 a5cbda310e39f5e8722bb1da7385bf97 156 PIRSF PIRSF002122 3 156 1.9E-63 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 VV93_RS14010 a5cbda310e39f5e8722bb1da7385bf97 156 PANTHER PTHR11205 1 156 5.4E-93 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 VV93_RS14010 a5cbda310e39f5e8722bb1da7385bf97 156 Gene3D G3DSA:1.10.455.10 8 156 7.0E-69 T 23-04-2016 IPR023798 Ribosomal protein S7 domain VV93_RS14010 a5cbda310e39f5e8722bb1da7385bf97 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 6.5E-66 T 23-04-2016 IPR023798 Ribosomal protein S7 domain VV93_RS14010 a5cbda310e39f5e8722bb1da7385bf97 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 23-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 VV93_RS11650 326e136dd227e1d05ec484dbb779a794 103 SUPERFAMILY SSF82657 1 88 1.83E-32 T 23-04-2016 IPR002634 BolA protein VV93_RS11650 326e136dd227e1d05ec484dbb779a794 103 PANTHER PTHR12735 1 103 1.8E-55 T 23-04-2016 VV93_RS11650 326e136dd227e1d05ec484dbb779a794 103 Gene3D G3DSA:3.30.300.90 1 101 1.4E-33 T 23-04-2016 IPR002634 BolA protein VV93_RS11650 326e136dd227e1d05ec484dbb779a794 103 PANTHER PTHR12735:SF23 1 103 1.8E-55 T 23-04-2016 VV93_RS11650 326e136dd227e1d05ec484dbb779a794 103 PIRSF PIRSF003113 1 99 2.5E-38 T 23-04-2016 IPR002634 BolA protein VV93_RS11650 326e136dd227e1d05ec484dbb779a794 103 Pfam PF01722 BolA-like protein 10 83 8.5E-32 T 23-04-2016 IPR002634 BolA protein VV93_RS05295 80fec91ec440d34aba50db8e1653f149 443 Gene3D G3DSA:1.10.3410.10 255 366 8.2E-27 T 23-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain VV93_RS05295 80fec91ec440d34aba50db8e1653f149 443 Pfam PF01966 HD domain 66 150 4.8E-8 T 23-04-2016 IPR006674 HD domain VV93_RS05295 80fec91ec440d34aba50db8e1653f149 443 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 3 439 34.38 T 23-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 VV93_RS05295 80fec91ec440d34aba50db8e1653f149 443 Gene3D G3DSA:1.10.3210.10 8 254 2.2E-69 T 23-04-2016 IPR006674 HD domain VV93_RS05295 80fec91ec440d34aba50db8e1653f149 443 Pfam PF13286 Phosphohydrolase-associated domain 350 437 4.5E-26 T 23-04-2016 IPR026875 Phosphohydrolase-associated domain VV93_RS05295 80fec91ec440d34aba50db8e1653f149 443 SUPERFAMILY SSF109604 23 171 3.7E-79 T 23-04-2016 VV93_RS05295 80fec91ec440d34aba50db8e1653f149 443 SUPERFAMILY SSF109604 236 441 3.7E-79 T 23-04-2016 VV93_RS05295 80fec91ec440d34aba50db8e1653f149 443 SMART SM00471 62 268 2.1E-8 T 23-04-2016 IPR003607 HD/PDEase domain VV93_RS05295 80fec91ec440d34aba50db8e1653f149 443 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 28 440 1.8E-128 T 23-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 VV93_RS05295 80fec91ec440d34aba50db8e1653f149 443 PANTHER PTHR11373 16 195 8.4E-50 T 23-04-2016 VV93_RS12795 ca1c2f5162d55b732a8acaa7b3d52020 269 SUPERFAMILY SSF101386 138 240 6.54E-24 T 23-04-2016 VV93_RS12795 ca1c2f5162d55b732a8acaa7b3d52020 269 PANTHER PTHR30522 5 266 1.7E-124 T 23-04-2016 VV93_RS12795 ca1c2f5162d55b732a8acaa7b3d52020 269 Gene3D G3DSA:1.10.287.1080 7 72 7.3E-7 T 23-04-2016 VV93_RS12795 ca1c2f5162d55b732a8acaa7b3d52020 269 Gene3D G3DSA:1.10.287.1080 134 222 3.8E-13 T 23-04-2016 VV93_RS12795 ca1c2f5162d55b732a8acaa7b3d52020 269 PANTHER PTHR30522:SF0 5 266 1.7E-124 T 23-04-2016 IPR011551 NTP pyrophosphohydrolase MazG VV93_RS12795 ca1c2f5162d55b732a8acaa7b3d52020 269 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 7.3E-27 T 23-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VV93_RS12795 ca1c2f5162d55b732a8acaa7b3d52020 269 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 233 1.8E-6 T 23-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VV93_RS12795 ca1c2f5162d55b732a8acaa7b3d52020 269 SUPERFAMILY SSF101386 3 105 3.93E-24 T 23-04-2016 VV93_RS12795 ca1c2f5162d55b732a8acaa7b3d52020 269 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 2.0E-103 T 23-04-2016 IPR011551 NTP pyrophosphohydrolase MazG VV93_RS10255 c28396d56ee8641b11bf826bbbaf16d7 428 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS10255 c28396d56ee8641b11bf826bbbaf16d7 428 PANTHER PTHR21090 1 425 2.6E-217 T 23-04-2016 VV93_RS10255 c28396d56ee8641b11bf826bbbaf16d7 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 427 35.627 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS10255 c28396d56ee8641b11bf826bbbaf16d7 428 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS10255 c28396d56ee8641b11bf826bbbaf16d7 428 Gene3D G3DSA:3.65.10.10 22 238 6.6E-69 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VV93_RS10255 c28396d56ee8641b11bf826bbbaf16d7 428 Gene3D G3DSA:3.65.10.10 239 424 4.0E-74 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VV93_RS10255 c28396d56ee8641b11bf826bbbaf16d7 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 3.5E-144 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS10255 c28396d56ee8641b11bf826bbbaf16d7 428 PIRSF PIRSF000505 1 427 7.4E-157 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS10255 c28396d56ee8641b11bf826bbbaf16d7 428 SUPERFAMILY SSF55205 1 424 3.92E-146 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VV93_RS10255 c28396d56ee8641b11bf826bbbaf16d7 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 4.7E-158 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VV93_RS07490 84078d3f0a078f1840ea48071974ef0b 306 Gene3D G3DSA:3.40.50.720 1 113 2.2E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS07490 84078d3f0a078f1840ea48071974ef0b 306 SUPERFAMILY SSF51735 1 113 6.3E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS07490 84078d3f0a078f1840ea48071974ef0b 306 Pfam PF13241 Putative NAD(P)-binding 6 116 5.4E-30 T 23-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VV93_RS07490 84078d3f0a078f1840ea48071974ef0b 306 Pfam PF10414 Sirohaem synthase dimerisation region 151 206 4.4E-14 T 23-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VV93_RS07490 84078d3f0a078f1840ea48071974ef0b 306 SUPERFAMILY SSF53790 224 301 5.09E-5 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VV93_RS07490 84078d3f0a078f1840ea48071974ef0b 306 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 197 1.0E-61 T 23-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VV93_RS07490 84078d3f0a078f1840ea48071974ef0b 306 Gene3D G3DSA:1.10.8.210 150 209 3.1E-17 T 23-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VV93_RS07490 84078d3f0a078f1840ea48071974ef0b 306 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 3.0E-6 T 23-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VV93_RS07490 84078d3f0a078f1840ea48071974ef0b 306 SUPERFAMILY SSF75615 115 201 7.72E-23 T 23-04-2016 VV93_RS07490 84078d3f0a078f1840ea48071974ef0b 306 Gene3D G3DSA:3.40.1010.10 224 304 6.2E-4 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 VV93_RS07490 84078d3f0a078f1840ea48071974ef0b 306 Gene3D G3DSA:3.30.160.110 114 149 1.7E-16 T 23-04-2016 VV93_RS07490 84078d3f0a078f1840ea48071974ef0b 306 PANTHER PTHR35330 1 228 1.0E-53 T 23-04-2016 VV93_RS01730 0ed32a44c3a01bc9fb5b12a0814b300b 375 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 29 361 3.1E-90 T 23-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain VV93_RS01730 0ed32a44c3a01bc9fb5b12a0814b300b 375 PANTHER PTHR18964 2 375 7.4E-161 T 23-04-2016 VV93_RS01730 0ed32a44c3a01bc9fb5b12a0814b300b 375 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 362 2.5E-75 T 23-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 VV93_RS01730 0ed32a44c3a01bc9fb5b12a0814b300b 375 PANTHER PTHR18964:SF70 2 375 7.4E-161 T 23-04-2016 VV93_RS01730 0ed32a44c3a01bc9fb5b12a0814b300b 375 Gene3D G3DSA:3.40.50.2000 200 364 8.2E-51 T 23-04-2016 VV93_RS01730 0ed32a44c3a01bc9fb5b12a0814b300b 375 Gene3D G3DSA:3.40.50.2000 1 199 6.2E-64 T 23-04-2016 VV93_RS01730 0ed32a44c3a01bc9fb5b12a0814b300b 375 SUPERFAMILY SSF53756 3 373 3.77E-112 T 23-04-2016 VV93_RS13520 107ce50b656fdd7ba0f2fae0ba139d3f 156 PANTHER PTHR30093 1 91 7.5E-26 T 23-04-2016 VV93_RS13520 107ce50b656fdd7ba0f2fae0ba139d3f 156 SUPERFAMILY SSF54523 7 114 4.63E-14 T 23-04-2016 VV93_RS13520 107ce50b656fdd7ba0f2fae0ba139d3f 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS13520 107ce50b656fdd7ba0f2fae0ba139d3f 156 PANTHER PTHR30093:SF7 1 91 7.5E-26 T 23-04-2016 VV93_RS13520 107ce50b656fdd7ba0f2fae0ba139d3f 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.4E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS13520 107ce50b656fdd7ba0f2fae0ba139d3f 156 Gene3D G3DSA:3.30.700.10 7 126 2.0E-7 T 23-04-2016 VV93_RS13520 107ce50b656fdd7ba0f2fae0ba139d3f 156 Pfam PF13633 Prokaryotic N-terminal methylation site 4 28 8.5E-9 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS12730 88557ca0874a0bd8ca92620ce2c5750f 349 PRINTS PR00142 RecA protein signature 210 238 1.7E-83 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV93_RS12730 88557ca0874a0bd8ca92620ce2c5750f 349 PRINTS PR00142 RecA protein signature 243 272 1.7E-83 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV93_RS12730 88557ca0874a0bd8ca92620ce2c5750f 349 PRINTS PR00142 RecA protein signature 93 122 1.7E-83 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV93_RS12730 88557ca0874a0bd8ca92620ce2c5750f 349 PRINTS PR00142 RecA protein signature 127 156 1.7E-83 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV93_RS12730 88557ca0874a0bd8ca92620ce2c5750f 349 PRINTS PR00142 RecA protein signature 165 194 1.7E-83 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV93_RS12730 88557ca0874a0bd8ca92620ce2c5750f 349 PRINTS PR00142 RecA protein signature 297 314 1.7E-83 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV93_RS12730 88557ca0874a0bd8ca92620ce2c5750f 349 ProSitePatterns PS00321 recA signature. 213 221 - T 23-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 VV93_RS12730 88557ca0874a0bd8ca92620ce2c5750f 349 Gene3D G3DSA:3.40.50.300 26 267 6.0E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12730 88557ca0874a0bd8ca92620ce2c5750f 349 SMART SM00382 57 228 1.4E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS12730 88557ca0874a0bd8ca92620ce2c5750f 349 PANTHER PTHR22942:SF1 3 335 1.9E-205 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV93_RS12730 88557ca0874a0bd8ca92620ce2c5750f 349 Gene3D G3DSA:3.30.250.10 268 326 1.2E-26 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal VV93_RS12730 88557ca0874a0bd8ca92620ce2c5750f 349 SUPERFAMILY SSF52540 4 266 3.81E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12730 88557ca0874a0bd8ca92620ce2c5750f 349 Pfam PF00154 recA bacterial DNA recombination protein 7 267 6.0E-143 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV93_RS12730 88557ca0874a0bd8ca92620ce2c5750f 349 SUPERFAMILY SSF54752 269 325 4.58E-20 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal VV93_RS12730 88557ca0874a0bd8ca92620ce2c5750f 349 PANTHER PTHR22942 3 335 1.9E-205 T 23-04-2016 VV93_RS12730 88557ca0874a0bd8ca92620ce2c5750f 349 Hamap MF_00268 Protein RecA [recA]. 5 329 50.162 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV93_RS12730 88557ca0874a0bd8ca92620ce2c5750f 349 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 4.1E-169 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV93_RS10765 333da875a6f927594f72de6b1ca3b89d 1954 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 71 142 1.4E-26 T 23-04-2016 IPR020012 Motility protein FimV, N-terminal VV93_RS10765 333da875a6f927594f72de6b1ca3b89d 1954 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1909 1949 5.1E-15 T 23-04-2016 IPR020011 Motility protein FimV, C-terminal VV93_RS02055 416d89d89e97f8a1c2e0edde89217522 119 Pfam PF10973 Protein of unknown function (DUF2799) 29 112 3.7E-21 T 23-04-2016 IPR021242 Protein of unknown function DUF2799 VV93_RS10705 dd0f153fb787553dbcb4e183f9cc8b87 109 Gene3D G3DSA:3.30.1310.10 1 109 1.3E-50 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VV93_RS10705 dd0f153fb787553dbcb4e183f9cc8b87 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.506 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VV93_RS10705 dd0f153fb787553dbcb4e183f9cc8b87 109 PIRSF PIRSF004555 3 109 6.0E-40 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VV93_RS10705 dd0f153fb787553dbcb4e183f9cc8b87 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 4.0E-39 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VV93_RS10705 dd0f153fb787553dbcb4e183f9cc8b87 109 PANTHER PTHR33449 1 109 8.2E-54 T 23-04-2016 VV93_RS10705 dd0f153fb787553dbcb4e183f9cc8b87 109 PANTHER PTHR33449:SF1 1 109 8.2E-54 T 23-04-2016 VV93_RS10705 dd0f153fb787553dbcb4e183f9cc8b87 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 1.5E-34 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VV93_RS10705 dd0f153fb787553dbcb4e183f9cc8b87 109 SUPERFAMILY SSF82607 11 103 2.09E-36 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VV93_RS10125 b97bc7ad337e892afa485d0c44d483b9 323 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 13 322 54.342 T 23-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 VV93_RS10125 b97bc7ad337e892afa485d0c44d483b9 323 PANTHER PTHR10108:SF847 53 322 2.6E-132 T 23-04-2016 VV93_RS10125 b97bc7ad337e892afa485d0c44d483b9 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 12 321 1.1E-146 T 23-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 VV93_RS10125 b97bc7ad337e892afa485d0c44d483b9 323 PANTHER PTHR10108 53 322 2.6E-132 T 23-04-2016 VV93_RS10125 b97bc7ad337e892afa485d0c44d483b9 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 2.3E-172 T 23-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like VV93_RS10125 b97bc7ad337e892afa485d0c44d483b9 323 Gene3D G3DSA:3.40.50.150 96 312 1.5E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS10125 b97bc7ad337e892afa485d0c44d483b9 323 SUPERFAMILY SSF53335 91 323 2.81E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS14950 563afa412feb9a50ebedca6b289b0164 136 Pfam PF13551 Winged helix-turn helix 2 61 2.0E-13 T 23-04-2016 VV93_RS14950 563afa412feb9a50ebedca6b289b0164 136 Pfam PF13592 Winged helix-turn helix 77 134 2.3E-16 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS14950 563afa412feb9a50ebedca6b289b0164 136 SUPERFAMILY SSF46689 1 110 8.96E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14950 563afa412feb9a50ebedca6b289b0164 136 Gene3D G3DSA:1.10.10.10 3 55 5.3E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS00835 a1b1d370ca04df72f82c342eda3394e5 227 SUPERFAMILY SSF52402 1 216 8.13E-55 T 23-04-2016 VV93_RS00835 a1b1d370ca04df72f82c342eda3394e5 227 Gene3D G3DSA:3.90.1490.10 145 222 5.4E-13 T 23-04-2016 VV93_RS00835 a1b1d370ca04df72f82c342eda3394e5 227 Gene3D G3DSA:3.40.50.620 2 143 1.7E-23 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS00835 a1b1d370ca04df72f82c342eda3394e5 227 Pfam PF01902 Diphthamide synthase 4 211 1.2E-21 T 23-04-2016 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|UniPathway: UPA00559 VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 Gene3D G3DSA:3.40.50.1000 3 158 1.1E-41 T 23-04-2016 IPR023214 HAD-like domain VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 4.4E-28 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 1.5E-79 T 23-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 Gene3D G3DSA:3.30.230.40 169 255 6.6E-38 T 23-04-2016 VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 8.9E-66 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 PANTHER PTHR23133:SF2 12 99 1.4E-174 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 PANTHER PTHR23133:SF2 165 357 1.4E-174 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 132 5.3E-6 T 23-04-2016 IPR013954 Polynucleotide kinase 3 phosphatase VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 37.608 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 SUPERFAMILY SSF54211 254 344 4.05E-31 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 2.6E-48 T 23-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 SUPERFAMILY SSF56784 3 157 2.0E-39 T 23-04-2016 IPR023214 HAD-like domain VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 PANTHER PTHR23133 165 357 1.4E-174 T 23-04-2016 VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 PANTHER PTHR23133 12 99 1.4E-174 T 23-04-2016 VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 Gene3D G3DSA:3.30.230.40 259 357 8.2E-32 T 23-04-2016 VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 56.071 T 23-04-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 VV93_RS06490 054932b80a69caa326d2a8b9db7367b9 357 SUPERFAMILY SSF54211 169 253 4.3E-32 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS03845 8128d2cc8f24eed3ac8ef186006bde6d 413 Pfam PF00589 Phage integrase family 214 376 1.8E-26 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS03845 8128d2cc8f24eed3ac8ef186006bde6d 413 Gene3D G3DSA:1.10.443.10 214 382 1.6E-23 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS03845 8128d2cc8f24eed3ac8ef186006bde6d 413 SUPERFAMILY SSF56349 106 386 1.03E-58 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS03845 8128d2cc8f24eed3ac8ef186006bde6d 413 PANTHER PTHR30629 2 402 5.7E-181 T 23-04-2016 VV93_RS03845 8128d2cc8f24eed3ac8ef186006bde6d 413 Gene3D G3DSA:1.10.150.130 106 206 6.7E-15 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal VV93_RS03845 8128d2cc8f24eed3ac8ef186006bde6d 413 PANTHER PTHR30629:SF2 2 402 5.7E-181 T 23-04-2016 VV93_RS03845 8128d2cc8f24eed3ac8ef186006bde6d 413 Pfam PF13356 Domain of unknown function (DUF4102) 8 95 1.2E-20 T 23-04-2016 IPR025166 Domain of unknown function DUF4102 VV93_RS08135 5ca2ffa994b3947a8dfdfb40ad6aad94 152 Pfam PF11749 Protein of unknown function (DUF3305) 45 142 5.7E-22 T 23-04-2016 IPR021736 Protein of unknown function DUF3305 VV93_RS14360 a68ce82ce0910ac51f43298133480ca9 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 1.1E-13 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV93_RS14360 a68ce82ce0910ac51f43298133480ca9 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 8.9E-42 T 23-04-2016 IPR025722 Bacterial transcriptional repressor TetR VV93_RS14360 a68ce82ce0910ac51f43298133480ca9 211 PANTHER PTHR30055 1 194 4.1E-58 T 23-04-2016 VV93_RS14360 a68ce82ce0910ac51f43298133480ca9 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 9.5E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV93_RS14360 a68ce82ce0910ac51f43298133480ca9 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 9.5E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV93_RS14360 a68ce82ce0910ac51f43298133480ca9 211 Gene3D G3DSA:1.10.357.10 2 161 8.9E-30 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VV93_RS14360 a68ce82ce0910ac51f43298133480ca9 211 PANTHER PTHR30055:SF30 1 194 4.1E-58 T 23-04-2016 VV93_RS14360 a68ce82ce0910ac51f43298133480ca9 211 SUPERFAMILY SSF46689 2 72 1.5E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS00830 74944d4e5785cb9e071a8bcf518ae888 613 SUPERFAMILY SSF56935 29 613 4.12E-117 T 23-04-2016 VV93_RS00830 74944d4e5785cb9e071a8bcf518ae888 613 PANTHER PTHR30069:SF10 7 550 7.3E-96 T 23-04-2016 VV93_RS00830 74944d4e5785cb9e071a8bcf518ae888 613 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 148 2.2E-29 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VV93_RS00830 74944d4e5785cb9e071a8bcf518ae888 613 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 1 613 34.303 T 23-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 VV93_RS00830 74944d4e5785cb9e071a8bcf518ae888 613 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 23-04-2016 IPR010916 TonB box, conserved site VV93_RS00830 74944d4e5785cb9e071a8bcf518ae888 613 PANTHER PTHR30069 7 550 7.3E-96 T 23-04-2016 VV93_RS00830 74944d4e5785cb9e071a8bcf518ae888 613 Pfam PF00593 TonB dependent receptor 386 612 7.2E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VV93_RS00830 74944d4e5785cb9e071a8bcf518ae888 613 Gene3D G3DSA:2.40.170.20 161 613 2.0E-78 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VV93_RS00830 74944d4e5785cb9e071a8bcf518ae888 613 Gene3D G3DSA:2.170.130.10 31 151 6.1E-37 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VV93_RS09115 23b23f6b43b2639b2cee8bdffe8f9f13 163 SUPERFAMILY SSF54523 7 91 3.06E-11 T 23-04-2016 VV93_RS09115 23b23f6b43b2639b2cee8bdffe8f9f13 163 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS09115 23b23f6b43b2639b2cee8bdffe8f9f13 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 1.0E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS09115 23b23f6b43b2639b2cee8bdffe8f9f13 163 PANTHER PTHR30093 1 65 2.1E-14 T 23-04-2016 VV93_RS09115 23b23f6b43b2639b2cee8bdffe8f9f13 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 24 6.6E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS09115 23b23f6b43b2639b2cee8bdffe8f9f13 163 PANTHER PTHR30093:SF7 1 65 2.1E-14 T 23-04-2016 VV93_RS09115 23b23f6b43b2639b2cee8bdffe8f9f13 163 Gene3D G3DSA:3.30.700.10 7 75 5.2E-5 T 23-04-2016 VV93_RS07265 48e11a3b3d5897b71b9180e76fa9c592 293 PANTHER PTHR32243 4 292 1.3E-103 T 23-04-2016 VV93_RS07265 48e11a3b3d5897b71b9180e76fa9c592 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 288 7.0E-12 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS07265 48e11a3b3d5897b71b9180e76fa9c592 293 PANTHER PTHR32243:SF13 4 292 1.3E-103 T 23-04-2016 VV93_RS07265 48e11a3b3d5897b71b9180e76fa9c592 293 SUPERFAMILY SSF161098 55 282 5.63E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS07265 48e11a3b3d5897b71b9180e76fa9c592 293 Gene3D G3DSA:1.10.3720.10 61 290 1.2E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06705 04673c48e4ccedf2f225592bcc9a3bd3 189 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 7 183 6.0E-70 T 23-04-2016 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 VV93_RS06705 04673c48e4ccedf2f225592bcc9a3bd3 189 PANTHER PTHR30037:SF4 8 187 3.9E-104 T 23-04-2016 VV93_RS06705 04673c48e4ccedf2f225592bcc9a3bd3 189 PANTHER PTHR30037 8 187 3.9E-104 T 23-04-2016 VV93_RS06705 04673c48e4ccedf2f225592bcc9a3bd3 189 Pfam PF03352 Methyladenine glycosylase 10 184 2.8E-74 T 23-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VV93_RS06705 04673c48e4ccedf2f225592bcc9a3bd3 189 Gene3D G3DSA:1.10.340.30 6 185 1.4E-79 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VV93_RS06705 04673c48e4ccedf2f225592bcc9a3bd3 189 SUPERFAMILY SSF48150 6 185 7.85E-76 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VV93_RS14045 96eafc57de33e5e90585a0e7c77ecdd9 326 PANTHER PTHR22847 37 285 1.7E-26 T 23-04-2016 VV93_RS14045 96eafc57de33e5e90585a0e7c77ecdd9 326 SMART SM00320 233 274 0.18 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 VV93_RS14045 96eafc57de33e5e90585a0e7c77ecdd9 326 SMART SM00320 285 323 260.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 VV93_RS14045 96eafc57de33e5e90585a0e7c77ecdd9 326 SMART SM00320 25 62 470.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 VV93_RS14045 96eafc57de33e5e90585a0e7c77ecdd9 326 SMART SM00320 192 230 0.036 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 VV93_RS14045 96eafc57de33e5e90585a0e7c77ecdd9 326 SMART SM00320 68 106 240.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 VV93_RS14045 96eafc57de33e5e90585a0e7c77ecdd9 326 SMART SM00320 150 189 6.0E-4 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 VV93_RS14045 96eafc57de33e5e90585a0e7c77ecdd9 326 Pfam PF13360 PQQ-like domain 171 286 2.5E-6 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat VV93_RS14045 96eafc57de33e5e90585a0e7c77ecdd9 326 SUPERFAMILY SSF50998 27 317 6.43E-44 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VV93_RS14045 96eafc57de33e5e90585a0e7c77ecdd9 326 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 23-04-2016 IPR019775 WD40 repeat, conserved site VV93_RS14045 96eafc57de33e5e90585a0e7c77ecdd9 326 Gene3D G3DSA:2.130.10.10 24 325 2.2E-42 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VV93_RS13010 831f871306185e464e22ef58571cc793 231 PANTHER PTHR33607 3 225 1.3E-55 T 23-04-2016 VV93_RS13010 831f871306185e464e22ef58571cc793 231 Pfam PF04231 Endonuclease I 38 227 4.9E-45 T 23-04-2016 IPR007346 Endonuclease I GO:0004518 VV93_RS13010 831f871306185e464e22ef58571cc793 231 SUPERFAMILY SSF54060 20 228 2.59E-94 T 23-04-2016 VV93_RS11600 f85618fe7953e9f5fe6218e3d4d1b977 354 Gene3D G3DSA:3.30.1490.100 241 353 4.5E-39 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS11600 f85618fe7953e9f5fe6218e3d4d1b977 354 SUPERFAMILY SSF56672 4 238 3.11E-93 T 23-04-2016 VV93_RS11600 f85618fe7953e9f5fe6218e3d4d1b977 354 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 37.163 T 23-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS11600 f85618fe7953e9f5fe6218e3d4d1b977 354 PANTHER PTHR11076 1 354 1.4E-200 T 23-04-2016 VV93_RS11600 f85618fe7953e9f5fe6218e3d4d1b977 354 Gene3D G3DSA:1.10.150.20 169 238 1.1E-22 T 23-04-2016 VV93_RS11600 f85618fe7953e9f5fe6218e3d4d1b977 354 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 341 1.1E-4 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS11600 f85618fe7953e9f5fe6218e3d4d1b977 354 PANTHER PTHR11076:SF32 1 354 1.4E-200 T 23-04-2016 VV93_RS11600 f85618fe7953e9f5fe6218e3d4d1b977 354 Gene3D G3DSA:3.30.70.270 70 168 4.1E-34 T 23-04-2016 VV93_RS11600 f85618fe7953e9f5fe6218e3d4d1b977 354 Pfam PF00817 impB/mucB/samB family 11 158 9.8E-49 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS11600 f85618fe7953e9f5fe6218e3d4d1b977 354 SUPERFAMILY SSF100879 245 353 3.14E-24 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS09630 5e50bca2c2ad87947a01a0daf2011bc7 714 Pfam PF07085 DRTGG domain 233 344 1.5E-27 T 23-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 VV93_RS09630 5e50bca2c2ad87947a01a0daf2011bc7 714 PIRSF PIRSF006107 1 714 0.0 T 23-04-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 VV93_RS09630 5e50bca2c2ad87947a01a0daf2011bc7 714 SUPERFAMILY SSF53659 392 709 3.08E-96 T 23-04-2016 VV93_RS09630 5e50bca2c2ad87947a01a0daf2011bc7 714 PANTHER PTHR23406 179 711 8.3E-56 T 23-04-2016 VV93_RS09630 5e50bca2c2ad87947a01a0daf2011bc7 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 6.7E-125 T 23-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 VV93_RS09630 5e50bca2c2ad87947a01a0daf2011bc7 714 Pfam PF13500 AAA domain 3 229 7.5E-50 T 23-04-2016 VV93_RS09630 5e50bca2c2ad87947a01a0daf2011bc7 714 PANTHER PTHR23406:SF3 179 711 8.3E-56 T 23-04-2016 VV93_RS09630 5e50bca2c2ad87947a01a0daf2011bc7 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 7.7E-132 T 23-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 VV93_RS09630 5e50bca2c2ad87947a01a0daf2011bc7 714 Gene3D G3DSA:3.40.50.300 2 223 1.9E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09630 5e50bca2c2ad87947a01a0daf2011bc7 714 SUPERFAMILY SSF52540 1 240 1.93E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09630 5e50bca2c2ad87947a01a0daf2011bc7 714 SUPERFAMILY SSF75138 229 353 4.58E-24 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like VV93_RS09630 5e50bca2c2ad87947a01a0daf2011bc7 714 Gene3D G3DSA:3.40.1390.20 225 364 1.1E-28 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like VV93_RS09630 5e50bca2c2ad87947a01a0daf2011bc7 714 Gene3D G3DSA:3.40.50.10750 524 682 1.4E-68 T 23-04-2016 VV93_RS03025 df454c95292f3d4c0abbf54d101a702e 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 6.8E-162 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03025 df454c95292f3d4c0abbf54d101a702e 476 Pfam PF01235 Sodium:alanine symporter family 48 452 9.2E-162 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03025 df454c95292f3d4c0abbf54d101a702e 476 PRINTS PR00175 Sodium/alanine symporter signature 178 196 3.49E-57 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03025 df454c95292f3d4c0abbf54d101a702e 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 3.49E-57 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03025 df454c95292f3d4c0abbf54d101a702e 476 PRINTS PR00175 Sodium/alanine symporter signature 206 225 3.49E-57 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03025 df454c95292f3d4c0abbf54d101a702e 476 PRINTS PR00175 Sodium/alanine symporter signature 87 109 3.49E-57 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03025 df454c95292f3d4c0abbf54d101a702e 476 PRINTS PR00175 Sodium/alanine symporter signature 349 371 3.49E-57 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03025 df454c95292f3d4c0abbf54d101a702e 476 PRINTS PR00175 Sodium/alanine symporter signature 410 430 3.49E-57 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03025 df454c95292f3d4c0abbf54d101a702e 476 PANTHER PTHR30330 1 473 4.0E-294 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS03025 df454c95292f3d4c0abbf54d101a702e 476 PANTHER PTHR30330:SF1 1 473 4.0E-294 T 23-04-2016 VV93_RS03025 df454c95292f3d4c0abbf54d101a702e 476 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV93_RS02115 33eb52b466eb7459172b3529159f656a 196 SUPERFAMILY SSF111283 2 196 1.44E-69 T 23-04-2016 VV93_RS02115 33eb52b466eb7459172b3529159f656a 196 PANTHER PTHR30624:SF1 1 196 6.2E-92 T 23-04-2016 VV93_RS02115 33eb52b466eb7459172b3529159f656a 196 Pfam PF01523 Putative modulator of DNA gyrase 2 73 2.0E-17 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VV93_RS02115 33eb52b466eb7459172b3529159f656a 196 PANTHER PTHR30624 1 196 6.2E-92 T 23-04-2016 VV93_RS10225 a14c9ee10b905c4857706d2477406846 264 SUPERFAMILY SSF53474 12 261 7.1E-46 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS10225 a14c9ee10b905c4857706d2477406846 264 PANTHER PTHR10992 17 262 2.1E-47 T 23-04-2016 VV93_RS10225 a14c9ee10b905c4857706d2477406846 264 PRINTS PR00412 Epoxide hydrolase signature 205 221 1.2E-6 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VV93_RS10225 a14c9ee10b905c4857706d2477406846 264 PRINTS PR00412 Epoxide hydrolase signature 24 42 1.2E-6 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VV93_RS10225 a14c9ee10b905c4857706d2477406846 264 PRINTS PR00412 Epoxide hydrolase signature 237 259 1.2E-6 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VV93_RS10225 a14c9ee10b905c4857706d2477406846 264 Pfam PF00561 alpha/beta hydrolase fold 19 121 5.9E-22 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VV93_RS10225 a14c9ee10b905c4857706d2477406846 264 Gene3D G3DSA:3.40.50.1820 14 261 2.0E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS10225 a14c9ee10b905c4857706d2477406846 264 PANTHER PTHR10992:SF756 17 262 2.1E-47 T 23-04-2016 VV93_RS09000 1ecb749bef462c5e9be6e1b101f5a501 358 PANTHER PTHR13696 64 262 7.1E-15 T 23-04-2016 VV93_RS09000 1ecb749bef462c5e9be6e1b101f5a501 358 Gene3D G3DSA:3.40.50.300 125 355 2.0E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09000 1ecb749bef462c5e9be6e1b101f5a501 358 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 131 263 9.5E-9 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VV93_RS09000 1ecb749bef462c5e9be6e1b101f5a501 358 SUPERFAMILY SSF52540 126 355 8.79E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09000 1ecb749bef462c5e9be6e1b101f5a501 358 PANTHER PTHR13696:SF68 64 262 7.1E-15 T 23-04-2016 VV93_RS04240 280ced574901612a042e78cd2ad00638 393 SMART SM00936 284 374 1.4E-37 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS04240 280ced574901612a042e78cd2ad00638 393 PANTHER PTHR21581 33 393 1.3E-157 T 23-04-2016 VV93_RS04240 280ced574901612a042e78cd2ad00638 393 Gene3D G3DSA:2.60.410.10 284 374 7.5E-32 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS04240 280ced574901612a042e78cd2ad00638 393 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 284 374 2.8E-27 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS04240 280ced574901612a042e78cd2ad00638 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 67 78 3.5E-17 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VV93_RS04240 280ced574901612a042e78cd2ad00638 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 3.5E-17 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VV93_RS04240 280ced574901612a042e78cd2ad00638 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 3.5E-17 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VV93_RS04240 280ced574901612a042e78cd2ad00638 393 Gene3D G3DSA:3.40.710.10 31 283 7.3E-98 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS04240 280ced574901612a042e78cd2ad00638 393 SUPERFAMILY SSF69189 284 376 9.22E-28 T 23-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS04240 280ced574901612a042e78cd2ad00638 393 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 35 264 1.5E-92 T 23-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VV93_RS04240 280ced574901612a042e78cd2ad00638 393 PANTHER PTHR21581:SF4 33 393 1.3E-157 T 23-04-2016 VV93_RS04240 280ced574901612a042e78cd2ad00638 393 SUPERFAMILY SSF56601 12 284 7.32E-86 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS04610 73baf06718e3d75444813b675673cbe2 638 SUPERFAMILY SSF64518 531 637 1.96E-24 T 23-04-2016 VV93_RS04610 73baf06718e3d75444813b675673cbe2 638 SUPERFAMILY SSF64518 171 411 1.96E-24 T 23-04-2016 VV93_RS04610 73baf06718e3d75444813b675673cbe2 638 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 339 9.0E-62 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VV93_RS04610 73baf06718e3d75444813b675673cbe2 638 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 581 637 2.2E-9 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VV93_RS04610 73baf06718e3d75444813b675673cbe2 638 PANTHER PTHR30033:SF1 1 638 8.3E-114 T 23-04-2016 VV93_RS04610 73baf06718e3d75444813b675673cbe2 638 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 9.5E-14 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VV93_RS04610 73baf06718e3d75444813b675673cbe2 638 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 9.5E-14 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VV93_RS04610 73baf06718e3d75444813b675673cbe2 638 PRINTS PR01005 Flagellar hook-associated protein signature 125 145 9.5E-14 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VV93_RS04610 73baf06718e3d75444813b675673cbe2 638 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 9.5E-14 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VV93_RS04610 73baf06718e3d75444813b675673cbe2 638 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 9.5E-14 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VV93_RS04610 73baf06718e3d75444813b675673cbe2 638 PRINTS PR01005 Flagellar hook-associated protein signature 408 425 9.5E-14 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VV93_RS04610 73baf06718e3d75444813b675673cbe2 638 PANTHER PTHR30033 1 638 8.3E-114 T 23-04-2016 VV93_RS14675 75ebcefca62bf77b9bcb1579362666c0 142 SUPERFAMILY SSF54747 3 73 1.07E-30 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal VV93_RS14675 75ebcefca62bf77b9bcb1579362666c0 142 PANTHER PTHR11661 1 142 8.8E-73 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VV93_RS14675 75ebcefca62bf77b9bcb1579362666c0 142 Gene3D G3DSA:1.10.10.250 73 141 1.7E-29 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VV93_RS14675 75ebcefca62bf77b9bcb1579362666c0 142 SUPERFAMILY SSF46906 68 141 3.27E-25 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VV93_RS14675 75ebcefca62bf77b9bcb1579362666c0 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 1.0E-16 T 23-04-2016 VV93_RS14675 75ebcefca62bf77b9bcb1579362666c0 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 2.6E-30 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal VV93_RS14675 75ebcefca62bf77b9bcb1579362666c0 142 Gene3D G3DSA:3.30.1550.10 2 72 2.2E-38 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal VV93_RS14675 75ebcefca62bf77b9bcb1579362666c0 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 5.1E-65 T 23-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 VV93_RS14675 75ebcefca62bf77b9bcb1579362666c0 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.7E-23 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VV93_RS14675 75ebcefca62bf77b9bcb1579362666c0 142 SMART SM00649 9 141 3.7E-83 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VV93_RS14675 75ebcefca62bf77b9bcb1579362666c0 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 23-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 VV93_RS14675 75ebcefca62bf77b9bcb1579362666c0 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.906 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VV93_RS05885 919a5eb0e444ccf0b1e533a349441311 188 Gene3D G3DSA:2.40.50.140 131 188 1.3E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS05885 919a5eb0e444ccf0b1e533a349441311 188 SUPERFAMILY SSF50249 67 129 5.14E-11 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS05885 919a5eb0e444ccf0b1e533a349441311 188 SUPERFAMILY SSF50249 132 188 1.4E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS05885 919a5eb0e444ccf0b1e533a349441311 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 8.1E-91 T 23-04-2016 IPR011897 Translation elongation factor P-like, YeiP VV93_RS05885 919a5eb0e444ccf0b1e533a349441311 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 6.9E-21 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VV93_RS05885 919a5eb0e444ccf0b1e533a349441311 188 PIRSF PIRSF005901 1 188 8.3E-60 T 23-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 VV93_RS05885 919a5eb0e444ccf0b1e533a349441311 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 122 1.0E-12 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VV93_RS05885 919a5eb0e444ccf0b1e533a349441311 188 Gene3D G3DSA:2.30.30.30 1 65 3.5E-15 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 VV93_RS05885 919a5eb0e444ccf0b1e533a349441311 188 PANTHER PTHR30053:SF5 1 188 3.3E-104 T 23-04-2016 VV93_RS05885 919a5eb0e444ccf0b1e533a349441311 188 SMART SM00841 132 187 1.6E-28 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VV93_RS05885 919a5eb0e444ccf0b1e533a349441311 188 SMART SM01185 69 124 1.9E-13 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VV93_RS05885 919a5eb0e444ccf0b1e533a349441311 188 SUPERFAMILY SSF50104 1 65 5.96E-12 T 23-04-2016 IPR008991 Translation protein SH3-like domain VV93_RS05885 919a5eb0e444ccf0b1e533a349441311 188 Gene3D G3DSA:2.40.50.140 67 129 1.9E-14 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS05885 919a5eb0e444ccf0b1e533a349441311 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 23-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 VV93_RS05885 919a5eb0e444ccf0b1e533a349441311 188 PANTHER PTHR30053 1 188 3.3E-104 T 23-04-2016 VV93_RS05885 919a5eb0e444ccf0b1e533a349441311 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 6.1E-18 T 23-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 VV93_RS05885 919a5eb0e444ccf0b1e533a349441311 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 45.719 T 23-04-2016 IPR011897 Translation elongation factor P-like, YeiP VV93_RS09560 2cb8d493e631ca9eb441221e4c810193 420 Pfam PF09375 Imelysin 40 398 9.4E-99 T 23-04-2016 VV93_RS14720 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 Pfam PF02237 Biotin protein ligase C terminal domain 274 318 4.1E-9 T 23-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 VV93_RS14720 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 Gene3D G3DSA:3.30.930.10 76 270 3.0E-60 T 23-04-2016 VV93_RS14720 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 SUPERFAMILY SSF55681 78 269 2.29E-60 T 23-04-2016 VV93_RS14720 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 Gene3D G3DSA:2.30.30.100 272 320 5.1E-18 T 23-04-2016 VV93_RS14720 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 PANTHER PTHR12835 11 318 2.0E-85 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 VV93_RS14720 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 Pfam PF08279 HTH domain 9 60 8.8E-12 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 VV93_RS14720 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 Gene3D G3DSA:1.10.10.10 7 64 5.2E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS14720 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 3.8E-21 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 VV93_RS14720 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 SUPERFAMILY SSF46785 9 61 8.37E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS14720 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 318 32.518 T 23-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 VV93_RS14720 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 318 5.0E-68 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 VV93_RS14720 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 SUPERFAMILY SSF50037 273 318 5.95E-9 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal VV93_RS07790 a799828d4a6f995fd7e2abd8078d4192 1613 SUPERFAMILY SSF53223 754 940 7.0E-26 T 23-04-2016 VV93_RS07790 a799828d4a6f995fd7e2abd8078d4192 1613 PANTHER PTHR11606 49 150 0.0 T 23-04-2016 VV93_RS07790 a799828d4a6f995fd7e2abd8078d4192 1613 PANTHER PTHR11606 673 1097 0.0 T 23-04-2016 VV93_RS07790 a799828d4a6f995fd7e2abd8078d4192 1613 PANTHER PTHR11606 215 562 0.0 T 23-04-2016 VV93_RS07790 a799828d4a6f995fd7e2abd8078d4192 1613 PANTHER PTHR11606 1122 1367 0.0 T 23-04-2016 VV93_RS07790 a799828d4a6f995fd7e2abd8078d4192 1613 PIRSF PIRSF036761 1 1610 0.0 T 23-04-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VV93_RS07790 a799828d4a6f995fd7e2abd8078d4192 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1602 0.0 T 23-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VV93_RS07790 a799828d4a6f995fd7e2abd8078d4192 1613 Gene3D G3DSA:3.40.50.720 942 1053 5.6E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS07790 a799828d4a6f995fd7e2abd8078d4192 1613 Gene3D G3DSA:3.40.50.720 1324 1338 5.6E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS07790 a799828d4a6f995fd7e2abd8078d4192 1613 Gene3D G3DSA:3.40.50.720 1108 1180 5.6E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS07790 a799828d4a6f995fd7e2abd8078d4192 1613 PANTHER PTHR11606:SF1 49 150 0.0 T 23-04-2016 VV93_RS07790 a799828d4a6f995fd7e2abd8078d4192 1613 PANTHER PTHR11606:SF1 673 1097 0.0 T 23-04-2016 VV93_RS07790 a799828d4a6f995fd7e2abd8078d4192 1613 PANTHER PTHR11606:SF1 215 562 0.0 T 23-04-2016 VV93_RS07790 a799828d4a6f995fd7e2abd8078d4192 1613 PANTHER PTHR11606:SF1 1122 1367 0.0 T 23-04-2016 VV93_RS07790 a799828d4a6f995fd7e2abd8078d4192 1613 Gene3D G3DSA:3.40.192.10 800 913 2.0E-4 T 23-04-2016 VV93_RS07790 a799828d4a6f995fd7e2abd8078d4192 1613 SUPERFAMILY SSF51735 945 1047 1.44E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS07790 a799828d4a6f995fd7e2abd8078d4192 1613 SUPERFAMILY SSF51735 1083 1281 1.44E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS05560 e21308be3cab4e35cba9f3ca6675957d 456 PANTHER PTHR32024 26 456 4.1E-172 T 23-04-2016 VV93_RS05560 e21308be3cab4e35cba9f3ca6675957d 456 Pfam PF02386 Cation transport protein 50 438 1.9E-55 T 23-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VV93_RS05560 e21308be3cab4e35cba9f3ca6675957d 456 PANTHER PTHR32024:SF1 26 456 4.1E-172 T 23-04-2016 VV93_RS05560 e21308be3cab4e35cba9f3ca6675957d 456 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 43 428 1.6E-124 T 23-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VV93_RS10410 d6cf7bcbcab6ccaa9befd71c7ab40a3a 247 Pfam PF06629 MltA-interacting protein MipA 26 247 4.8E-40 T 23-04-2016 IPR010583 MltA-interacting MipA VV93_RS10410 d6cf7bcbcab6ccaa9befd71c7ab40a3a 247 PANTHER PTHR38776 1 247 1.9E-41 T 23-04-2016 VV93_RS09610 84692b215bb599c68232063e7e318123 310 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 270 1.2E-25 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 VV93_RS09610 84692b215bb599c68232063e7e318123 310 PANTHER PTHR32196 1 298 4.2E-135 T 23-04-2016 VV93_RS09610 84692b215bb599c68232063e7e318123 310 PANTHER PTHR32196:SF27 1 298 4.2E-135 T 23-04-2016 VV93_RS02825 a75eb586afa513b5a70c5272d553be22 355 Gene3D G3DSA:3.40.50.2000 1 195 4.7E-76 T 23-04-2016 VV93_RS02825 a75eb586afa513b5a70c5272d553be22 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 1.9E-46 T 23-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS02825 a75eb586afa513b5a70c5272d553be22 355 SUPERFAMILY SSF53756 5 352 2.62E-123 T 23-04-2016 VV93_RS02825 a75eb586afa513b5a70c5272d553be22 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 337 1.2E-32 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS02825 a75eb586afa513b5a70c5272d553be22 355 PANTHER PTHR21015 3 355 7.2E-123 T 23-04-2016 VV93_RS02825 a75eb586afa513b5a70c5272d553be22 355 Gene3D G3DSA:3.40.50.2000 253 331 4.2E-6 T 23-04-2016 VV93_RS02825 a75eb586afa513b5a70c5272d553be22 355 PANTHER PTHR21015:SF22 3 355 7.2E-123 T 23-04-2016 VV93_RS02825 a75eb586afa513b5a70c5272d553be22 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 3.2E-116 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS02825 a75eb586afa513b5a70c5272d553be22 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.402 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS14230 a813cc0892ef92d5cb7cb36bf6c528fb 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 2.8E-51 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VV93_RS14230 a813cc0892ef92d5cb7cb36bf6c528fb 154 PANTHER PTHR33540 1 152 2.0E-52 T 23-04-2016 VV93_RS14230 a813cc0892ef92d5cb7cb36bf6c528fb 154 Gene3D G3DSA:3.40.50.300 4 150 1.1E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14230 a813cc0892ef92d5cb7cb36bf6c528fb 154 PANTHER PTHR33540:SF2 1 152 2.0E-52 T 23-04-2016 VV93_RS14230 a813cc0892ef92d5cb7cb36bf6c528fb 154 SUPERFAMILY SSF52540 27 149 2.37E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14230 a813cc0892ef92d5cb7cb36bf6c528fb 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 1.8E-42 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VV93_RS04420 c716f963504768350ae940e5363e163f 419 SUPERFAMILY SSF51735 160 313 1.1E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS04420 c716f963504768350ae940e5363e163f 419 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 7.8E-145 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VV93_RS04420 c716f963504768350ae940e5363e163f 419 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.855 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VV93_RS04420 c716f963504768350ae940e5363e163f 419 Gene3D G3DSA:3.40.50.720 182 356 1.2E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS04420 c716f963504768350ae940e5363e163f 419 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 413 1.7E-23 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VV93_RS04420 c716f963504768350ae940e5363e163f 419 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 23-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VV93_RS04420 c716f963504768350ae940e5363e163f 419 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 2.2E-50 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VV93_RS04420 c716f963504768350ae940e5363e163f 419 PANTHER PTHR21089:SF3 270 357 5.0E-142 T 23-04-2016 VV93_RS04420 c716f963504768350ae940e5363e163f 419 PANTHER PTHR21089:SF3 67 254 5.0E-142 T 23-04-2016 VV93_RS04420 c716f963504768350ae940e5363e163f 419 SUPERFAMILY SSF69075 315 416 7.45E-28 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VV93_RS04420 c716f963504768350ae940e5363e163f 419 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 9.0E-53 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VV93_RS04420 c716f963504768350ae940e5363e163f 419 SUPERFAMILY SSF69742 1 156 1.96E-48 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VV93_RS04420 c716f963504768350ae940e5363e163f 419 PANTHER PTHR21089 270 357 5.0E-142 T 23-04-2016 VV93_RS04420 c716f963504768350ae940e5363e163f 419 PANTHER PTHR21089 67 254 5.0E-142 T 23-04-2016 VV93_RS04420 c716f963504768350ae940e5363e163f 419 PIRSF PIRSF000445 1 419 7.4E-158 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VV93_RS04305 3abeddae2116bc9bd4052ca45e9e06e2 370 Pfam PF02562 PhoH-like protein 120 323 8.2E-95 T 23-04-2016 IPR003714 PhoH-like protein GO:0005524 VV93_RS04305 3abeddae2116bc9bd4052ca45e9e06e2 370 PANTHER PTHR30473 2 346 5.2E-206 T 23-04-2016 VV93_RS04305 3abeddae2116bc9bd4052ca45e9e06e2 370 SUPERFAMILY SSF52540 119 320 5.29E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04305 3abeddae2116bc9bd4052ca45e9e06e2 370 Gene3D G3DSA:3.40.50.300 120 323 4.0E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04305 3abeddae2116bc9bd4052ca45e9e06e2 370 PANTHER PTHR30473:SF1 2 346 5.2E-206 T 23-04-2016 VV93_RS11225 8c4c3d41273c74fb885e158664ca57e0 145 Pfam PF14015 Protein of unknown function (DUF4231) 10 108 2.8E-14 T 23-04-2016 IPR025325 Protein of unknown function DUF4231 VV93_RS11605 cc106d8cc7fd0410dab821c986d3b2f2 416 Pfam PF00072 Response regulator receiver domain 17 116 7.8E-12 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS11605 cc106d8cc7fd0410dab821c986d3b2f2 416 Pfam PF00072 Response regulator receiver domain 139 247 9.4E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS11605 cc106d8cc7fd0410dab821c986d3b2f2 416 SMART SM00267 256 416 1.2E-41 T 23-04-2016 IPR000160 GGDEF domain VV93_RS11605 cc106d8cc7fd0410dab821c986d3b2f2 416 Gene3D G3DSA:3.30.70.270 269 414 1.4E-36 T 23-04-2016 VV93_RS11605 cc106d8cc7fd0410dab821c986d3b2f2 416 SUPERFAMILY SSF55073 272 414 4.39E-35 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS11605 cc106d8cc7fd0410dab821c986d3b2f2 416 SMART SM00448 15 127 3.7E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS11605 cc106d8cc7fd0410dab821c986d3b2f2 416 SMART SM00448 136 250 2.7E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS11605 cc106d8cc7fd0410dab821c986d3b2f2 416 PANTHER PTHR26402 136 246 7.4E-29 T 23-04-2016 VV93_RS11605 cc106d8cc7fd0410dab821c986d3b2f2 416 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 265 414 5.9E-38 T 23-04-2016 IPR000160 GGDEF domain VV93_RS11605 cc106d8cc7fd0410dab821c986d3b2f2 416 Gene3D G3DSA:3.40.50.2300 135 262 3.5E-32 T 23-04-2016 VV93_RS11605 cc106d8cc7fd0410dab821c986d3b2f2 416 Gene3D G3DSA:3.40.50.2300 15 134 4.2E-19 T 23-04-2016 VV93_RS11605 cc106d8cc7fd0410dab821c986d3b2f2 416 SUPERFAMILY SSF52172 136 273 1.21E-31 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS11605 cc106d8cc7fd0410dab821c986d3b2f2 416 SUPERFAMILY SSF52172 16 135 7.97E-21 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS11605 cc106d8cc7fd0410dab821c986d3b2f2 416 Pfam PF00990 Diguanylate cyclase, GGDEF domain 267 412 6.0E-33 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09140 430135bcef850d741e3cc9a8b74574c4 332 Pfam PF00535 Glycosyl transferase family 2 8 124 2.9E-15 T 23-04-2016 IPR001173 Glycosyltransferase 2-like VV93_RS09140 430135bcef850d741e3cc9a8b74574c4 332 SUPERFAMILY SSF53448 3 216 2.44E-37 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS09140 430135bcef850d741e3cc9a8b74574c4 332 Gene3D G3DSA:3.90.550.10 5 216 3.5E-27 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS09140 430135bcef850d741e3cc9a8b74574c4 332 PANTHER PTHR22916 4 295 3.0E-29 T 23-04-2016 VV93_RS05580 fb9f915034363a777c588139fffd836a 75 PIRSF PIRSF006188 1 72 9.9E-35 T 23-04-2016 IPR009857 Uncharacterised protein family UPF0352 VV93_RS05580 fb9f915034363a777c588139fffd836a 75 SUPERFAMILY SSF158651 1 75 3.27E-29 T 23-04-2016 VV93_RS05580 fb9f915034363a777c588139fffd836a 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 6.0E-33 T 23-04-2016 IPR009857 Uncharacterised protein family UPF0352 VV93_RS05580 fb9f915034363a777c588139fffd836a 75 Gene3D G3DSA:1.10.3390.10 1 75 3.6E-33 T 23-04-2016 IPR023202 YejL-like domain VV93_RS05580 fb9f915034363a777c588139fffd836a 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 3.1E-19 T 23-04-2016 IPR009857 Uncharacterised protein family UPF0352 VV93_RS05580 fb9f915034363a777c588139fffd836a 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.597 T 23-04-2016 IPR009857 Uncharacterised protein family UPF0352 VV93_RS12725 a429f47b74ef347314c16b87b59e05c5 153 Hamap MF_01114 Regulatory protein RecX [recX]. 11 153 13.429 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 VV93_RS12725 a429f47b74ef347314c16b87b59e05c5 153 Gene3D G3DSA:1.10.10.10 58 100 2.3E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS12725 a429f47b74ef347314c16b87b59e05c5 153 Pfam PF02631 RecX family 36 150 3.7E-29 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 VV93_RS12725 a429f47b74ef347314c16b87b59e05c5 153 PANTHER PTHR33602:SF1 13 149 1.7E-36 T 23-04-2016 VV93_RS12725 a429f47b74ef347314c16b87b59e05c5 153 Gene3D G3DSA:1.10.10.10 104 151 1.4E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS12725 a429f47b74ef347314c16b87b59e05c5 153 PANTHER PTHR33602 13 149 1.7E-36 T 23-04-2016 VV93_RS12725 a429f47b74ef347314c16b87b59e05c5 153 Gene3D G3DSA:1.10.10.10 11 57 1.1E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS06405 cb93c2b1a5385bfa149f131d3c6e4da8 241 PANTHER PTHR24322:SF330 6 173 1.8E-31 T 23-04-2016 VV93_RS06405 cb93c2b1a5385bfa149f131d3c6e4da8 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VV93_RS06405 cb93c2b1a5385bfa149f131d3c6e4da8 241 Gene3D G3DSA:3.40.50.720 4 235 1.7E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS06405 cb93c2b1a5385bfa149f131d3c6e4da8 241 SUPERFAMILY SSF51735 4 235 1.1E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS06405 cb93c2b1a5385bfa149f131d3c6e4da8 241 PANTHER PTHR24322 6 173 1.8E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06405 cb93c2b1a5385bfa149f131d3c6e4da8 241 Pfam PF00106 short chain dehydrogenase 3 182 8.4E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06405 cb93c2b1a5385bfa149f131d3c6e4da8 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 9.5E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06405 cb93c2b1a5385bfa149f131d3c6e4da8 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 9.5E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06405 cb93c2b1a5385bfa149f131d3c6e4da8 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 9.5E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS09895 24dfb39975d888a9feb9ab42f613cb88 262 Pfam PF00455 DeoR C terminal sensor domain 75 232 2.1E-48 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain VV93_RS09895 24dfb39975d888a9feb9ab42f613cb88 262 Gene3D G3DSA:3.40.50.1360 75 215 4.9E-9 T 23-04-2016 VV93_RS09895 24dfb39975d888a9feb9ab42f613cb88 262 SMART SM01134 73 233 7.8E-62 T 23-04-2016 VV93_RS09895 24dfb39975d888a9feb9ab42f613cb88 262 Gene3D G3DSA:1.10.10.10 3 59 1.2E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS09895 24dfb39975d888a9feb9ab42f613cb88 262 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.7E-5 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS09895 24dfb39975d888a9feb9ab42f613cb88 262 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.7E-5 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS09895 24dfb39975d888a9feb9ab42f613cb88 262 PANTHER PTHR30363 1 248 7.3E-122 T 23-04-2016 VV93_RS09895 24dfb39975d888a9feb9ab42f613cb88 262 SUPERFAMILY SSF100950 75 233 2.93E-25 T 23-04-2016 VV93_RS09895 24dfb39975d888a9feb9ab42f613cb88 262 SUPERFAMILY SSF46785 5 58 4.68E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS09895 24dfb39975d888a9feb9ab42f613cb88 262 SMART SM00420 6 58 9.8E-19 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS09895 24dfb39975d888a9feb9ab42f613cb88 262 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 3.5E-14 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS09895 24dfb39975d888a9feb9ab42f613cb88 262 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VV93_RS09895 24dfb39975d888a9feb9ab42f613cb88 262 PANTHER PTHR30363:SF5 1 248 7.3E-122 T 23-04-2016 VV93_RS08205 63182546e87487cb3bc7d9bf2b729d54 303 SUPERFAMILY SSF53067 1 299 7.21E-57 T 23-04-2016 VV93_RS08205 63182546e87487cb3bc7d9bf2b729d54 303 Gene3D G3DSA:3.30.420.40 1 132 1.1E-36 T 23-04-2016 VV93_RS08205 63182546e87487cb3bc7d9bf2b729d54 303 PANTHER PTHR18964 1 301 5.9E-148 T 23-04-2016 VV93_RS08205 63182546e87487cb3bc7d9bf2b729d54 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 65.673 T 23-04-2016 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906|UniPathway: UPA00544 VV93_RS08205 63182546e87487cb3bc7d9bf2b729d54 303 Pfam PF00480 ROK family 2 300 3.2E-73 T 23-04-2016 IPR000600 ROK family VV93_RS08205 63182546e87487cb3bc7d9bf2b729d54 303 PANTHER PTHR18964:SF134 1 301 5.9E-148 T 23-04-2016 VV93_RS08205 63182546e87487cb3bc7d9bf2b729d54 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 23-04-2016 IPR000600 ROK family VV93_RS08205 63182546e87487cb3bc7d9bf2b729d54 303 Gene3D G3DSA:3.30.420.40 133 280 4.0E-44 T 23-04-2016 VV93_RS00200 69f64ae955cf2d7509529b1ccdd27a8b 672 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 1.3E-76 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 VV93_RS00200 69f64ae955cf2d7509529b1ccdd27a8b 672 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.802 T 23-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VV93_RS00200 69f64ae955cf2d7509529b1ccdd27a8b 672 SUPERFAMILY SSF52540 1 640 1.06E-162 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00200 69f64ae955cf2d7509529b1ccdd27a8b 672 Gene3D G3DSA:3.40.50.300 280 382 5.1E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00200 69f64ae955cf2d7509529b1ccdd27a8b 672 Gene3D G3DSA:3.40.50.300 552 642 5.1E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00200 69f64ae955cf2d7509529b1ccdd27a8b 672 Gene3D G3DSA:1.10.486.10 383 527 1.8E-40 T 23-04-2016 VV93_RS00200 69f64ae955cf2d7509529b1ccdd27a8b 672 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 1.6E-73 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VV93_RS00200 69f64ae955cf2d7509529b1ccdd27a8b 672 Gene3D G3DSA:3.40.50.300 2 104 8.4E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00200 69f64ae955cf2d7509529b1ccdd27a8b 672 Gene3D G3DSA:3.40.50.300 182 279 8.4E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00200 69f64ae955cf2d7509529b1ccdd27a8b 672 Gene3D G3DSA:1.10.10.160 108 181 8.5E-26 T 23-04-2016 IPR013986 DExx box DNA helicase domain VV93_RS00200 69f64ae955cf2d7509529b1ccdd27a8b 672 PANTHER PTHR11070 1 670 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VV93_RS00200 69f64ae955cf2d7509529b1ccdd27a8b 672 PANTHER PTHR11070:SF19 1 670 0.0 T 23-04-2016 VV93_RS00200 69f64ae955cf2d7509529b1ccdd27a8b 672 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 23-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VV93_RS11115 af6d2ace2e832e9ab4aadee9f6f535bf 95 Pfam PF09904 Winged helix-turn helix 4 91 4.3E-38 T 23-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 VV93_RS11115 af6d2ace2e832e9ab4aadee9f6f535bf 95 PIRSF PIRSF037266 1 94 2.9E-42 T 23-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 VV93_RS04570 1a0657c02b7dc05812b710f6dbe9875a 138 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VV93_RS04570 1a0657c02b7dc05812b710f6dbe9875a 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 136 3.0E-12 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VV93_RS04570 1a0657c02b7dc05812b710f6dbe9875a 138 PANTHER PTHR30435 1 138 1.4E-63 T 23-04-2016 VV93_RS04570 1a0657c02b7dc05812b710f6dbe9875a 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VV93_RS04570 1a0657c02b7dc05812b710f6dbe9875a 138 PANTHER PTHR30435:SF2 1 138 1.4E-63 T 23-04-2016 VV93_RS04570 1a0657c02b7dc05812b710f6dbe9875a 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 1.9E-51 T 23-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 VV93_RS09695 10cf86d04491ca2d6a2697958bb03182 596 Gene3D G3DSA:3.90.76.10 141 292 2.5E-22 T 23-04-2016 VV93_RS09695 10cf86d04491ca2d6a2697958bb03182 596 PANTHER PTHR30290 125 593 1.7E-139 T 23-04-2016 VV93_RS09695 10cf86d04491ca2d6a2697958bb03182 596 PANTHER PTHR30290 29 88 1.7E-139 T 23-04-2016 VV93_RS09695 10cf86d04491ca2d6a2697958bb03182 596 PANTHER PTHR30290:SF30 125 593 1.7E-139 T 23-04-2016 VV93_RS09695 10cf86d04491ca2d6a2697958bb03182 596 PANTHER PTHR30290:SF30 29 88 1.7E-139 T 23-04-2016 VV93_RS09695 10cf86d04491ca2d6a2697958bb03182 596 Pfam PF12793 Sugar transport-related sRNA regulator N-term 13 126 5.3E-33 T 23-04-2016 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VV93_RS09695 10cf86d04491ca2d6a2697958bb03182 596 SUPERFAMILY SSF53850 130 594 1.81E-59 T 23-04-2016 VV93_RS09695 10cf86d04491ca2d6a2697958bb03182 596 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 170 331 5.7E-17 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain VV93_RS07655 ee54766e3f8d41bc812059d80bb854fa 486 PANTHER PTHR30250:SF8 1 454 6.9E-15 T 23-04-2016 VV93_RS07655 ee54766e3f8d41bc812059d80bb854fa 486 Pfam PF01943 Polysaccharide biosynthesis protein 12 273 2.7E-12 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 VV93_RS07655 ee54766e3f8d41bc812059d80bb854fa 486 PANTHER PTHR30250 1 454 6.9E-15 T 23-04-2016 VV93_RS08405 576a723ac313ff5d639444cd7fe66c4e 154 PIRSF PIRSF021320 2 154 1.0E-42 T 23-04-2016 IPR009326 Protein of unknown function DUF984 VV93_RS08405 576a723ac313ff5d639444cd7fe66c4e 154 PANTHER PTHR39203 3 153 3.2E-30 T 23-04-2016 VV93_RS08405 576a723ac313ff5d639444cd7fe66c4e 154 Pfam PF04266 ASCH domain 42 153 2.4E-24 T 23-04-2016 IPR007374 ASCH domain VV93_RS08405 576a723ac313ff5d639444cd7fe66c4e 154 SUPERFAMILY SSF88697 4 153 7.46E-53 T 23-04-2016 IPR015947 PUA-like domain VV93_RS08405 576a723ac313ff5d639444cd7fe66c4e 154 Gene3D G3DSA:3.10.400.10 6 154 6.7E-53 T 23-04-2016 VV93_RS08405 576a723ac313ff5d639444cd7fe66c4e 154 SMART SM01022 30 153 2.3E-41 T 23-04-2016 IPR007374 ASCH domain VV93_RS02285 f990a008ad4ab5b8419a4dd60d7c3ac3 126 PANTHER PTHR14289 1 122 5.8E-48 T 23-04-2016 VV93_RS02285 f990a008ad4ab5b8419a4dd60d7c3ac3 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.663 T 23-04-2016 IPR023065 Uncharacterised protein family ApaG VV93_RS02285 f990a008ad4ab5b8419a4dd60d7c3ac3 126 SUPERFAMILY SSF110069 6 126 1.44E-46 T 23-04-2016 IPR007474 ApaG domain VV93_RS02285 f990a008ad4ab5b8419a4dd60d7c3ac3 126 Pfam PF04379 Protein of unknown function (DUF525) 18 103 9.7E-33 T 23-04-2016 IPR007474 ApaG domain VV93_RS02285 f990a008ad4ab5b8419a4dd60d7c3ac3 126 Gene3D G3DSA:2.60.40.1470 5 125 5.0E-46 T 23-04-2016 IPR007474 ApaG domain VV93_RS00840 9acf244688f0b2e943079fd29a95917e 263 Gene3D G3DSA:3.40.50.1860 6 175 1.5E-45 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS00840 9acf244688f0b2e943079fd29a95917e 263 PANTHER PTHR21198 1 262 5.7E-92 T 23-04-2016 VV93_RS00840 9acf244688f0b2e943079fd29a95917e 263 PANTHER PTHR21198:SF2 1 262 5.7E-92 T 23-04-2016 VV93_RS00840 9acf244688f0b2e943079fd29a95917e 263 SUPERFAMILY SSF53681 8 108 8.5E-30 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS00840 9acf244688f0b2e943079fd29a95917e 263 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 215 1.5E-25 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS00840 9acf244688f0b2e943079fd29a95917e 263 Hamap MF_00258 Glutamate racemase [murI]. 7 254 32.808 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS00840 9acf244688f0b2e943079fd29a95917e 263 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 224 1.7E-68 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS00840 9acf244688f0b2e943079fd29a95917e 263 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 23-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS00840 9acf244688f0b2e943079fd29a95917e 263 SUPERFAMILY SSF53681 111 260 4.91E-34 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VV93_RS11485 05e59a98266ce73064cbe000ca9a283c 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 VV93_RS11485 05e59a98266ce73064cbe000ca9a283c 292 Gene3D G3DSA:3.90.230.10 3 286 2.0E-92 T 23-04-2016 IPR000994 Peptidase M24, structural domain VV93_RS11485 05e59a98266ce73064cbe000ca9a283c 292 Pfam PF00557 Metallopeptidase family M24 12 271 4.6E-46 T 23-04-2016 IPR000994 Peptidase M24, structural domain VV93_RS11485 05e59a98266ce73064cbe000ca9a283c 292 PANTHER PTHR10804 1 292 1.7E-144 T 23-04-2016 VV93_RS11485 05e59a98266ce73064cbe000ca9a283c 292 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 279 4.8E-82 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 VV93_RS11485 05e59a98266ce73064cbe000ca9a283c 292 SUPERFAMILY SSF55920 3 280 9.03E-81 T 23-04-2016 IPR000994 Peptidase M24, structural domain VV93_RS11485 05e59a98266ce73064cbe000ca9a283c 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 40.49 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 VV93_RS11485 05e59a98266ce73064cbe000ca9a283c 292 PANTHER PTHR10804:SF75 1 292 1.7E-144 T 23-04-2016 VV93_RS14390 1bcf40be8f9cb235170140badf70c64f 125 SUPERFAMILY SSF81343 7 125 1.44E-49 T 23-04-2016 VV93_RS14390 1bcf40be8f9cb235170140badf70c64f 125 Gene3D G3DSA:1.20.1300.10 8 125 1.7E-51 T 23-04-2016 VV93_RS14390 1bcf40be8f9cb235170140badf70c64f 125 Pfam PF02313 Fumarate reductase subunit D 11 123 4.9E-43 T 23-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VV93_RS14390 1bcf40be8f9cb235170140badf70c64f 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.318 T 23-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VV93_RS14390 1bcf40be8f9cb235170140badf70c64f 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 1.0E-60 T 23-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VV93_RS14390 1bcf40be8f9cb235170140badf70c64f 125 PIRSF PIRSF000179 6 125 6.7E-55 T 23-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VV93_RS05435 e201cb3769edc421df84895413535fc8 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 6 82 1.2E-25 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 VV93_RS05435 e201cb3769edc421df84895413535fc8 100 Gene3D G3DSA:1.10.10.10 2 86 1.4E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS05435 e201cb3769edc421df84895413535fc8 100 PANTHER PTHR10815:SF2 1 100 2.6E-43 T 23-04-2016 VV93_RS05435 e201cb3769edc421df84895413535fc8 100 SUPERFAMILY SSF46767 2 84 1.83E-26 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 VV93_RS05435 e201cb3769edc421df84895413535fc8 100 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 4 81 8.4E-14 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 VV93_RS05435 e201cb3769edc421df84895413535fc8 100 PANTHER PTHR10815 1 100 2.6E-43 T 23-04-2016 VV93_RS14170 5f655ab88016e86976af29a4435b45a6 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 1.7E-33 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type VV93_RS14170 5f655ab88016e86976af29a4435b45a6 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 47.14 T 23-04-2016 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 VV93_RS14170 5f655ab88016e86976af29a4435b45a6 141 PANTHER PTHR33221:SF4 2 139 1.7E-62 T 23-04-2016 VV93_RS14170 5f655ab88016e86976af29a4435b45a6 141 PANTHER PTHR33221 2 139 1.7E-62 T 23-04-2016 VV93_RS14170 5f655ab88016e86976af29a4435b45a6 141 Pfam PF02082 Transcriptional regulator 1 82 2.8E-23 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type VV93_RS14170 5f655ab88016e86976af29a4435b45a6 141 SUPERFAMILY SSF46785 2 131 1.89E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS14170 5f655ab88016e86976af29a4435b45a6 141 Gene3D G3DSA:1.10.10.10 1 133 6.8E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS10095 a56582d243e739fad42fb11cc85c7dae 204 Gene3D G3DSA:2.40.50.140 2 65 7.3E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS10095 a56582d243e739fad42fb11cc85c7dae 204 PANTHER PTHR33796 2 204 3.6E-83 T 23-04-2016 VV93_RS10095 a56582d243e739fad42fb11cc85c7dae 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 6.7E-15 T 23-04-2016 VV93_RS10095 a56582d243e739fad42fb11cc85c7dae 204 SMART SM00278 108 127 0.071 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VV93_RS10095 a56582d243e739fad42fb11cc85c7dae 204 SMART SM00278 73 92 180.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VV93_RS10095 a56582d243e739fad42fb11cc85c7dae 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 31.8 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VV93_RS10095 a56582d243e739fad42fb11cc85c7dae 204 SUPERFAMILY SSF47781 66 137 7.23E-20 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VV93_RS10095 a56582d243e739fad42fb11cc85c7dae 204 SUPERFAMILY SSF50249 2 63 9.14E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS10095 a56582d243e739fad42fb11cc85c7dae 204 SUPERFAMILY SSF46929 158 203 1.96E-12 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 VV93_RS10095 a56582d243e739fad42fb11cc85c7dae 204 Gene3D G3DSA:1.10.8.10 157 204 1.1E-24 T 23-04-2016 VV93_RS10095 a56582d243e739fad42fb11cc85c7dae 204 Pfam PF01330 RuvA N terminal domain 2 62 1.2E-20 T 23-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 VV93_RS10095 a56582d243e739fad42fb11cc85c7dae 204 Gene3D G3DSA:1.10.150.20 67 141 4.4E-29 T 23-04-2016 VV93_RS10095 a56582d243e739fad42fb11cc85c7dae 204 Pfam PF07499 RuvA, C-terminal domain 160 203 5.6E-17 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 VV93_RS10095 a56582d243e739fad42fb11cc85c7dae 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 1.3E-65 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VV93_RS15330 3b496ae04bb5166be127935b6a1ed842 71 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 63 1.1E-17 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV93_RS15330 3b496ae04bb5166be127935b6a1ed842 71 SUPERFAMILY SSF47413 1 67 1.58E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS15330 3b496ae04bb5166be127935b6a1ed842 71 Gene3D G3DSA:1.10.260.40 1 67 1.2E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS06715 eb1c247fa30a6fa570e2b2b85351e379 484 SMART SM00155 219 246 4.0E-6 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VV93_RS06715 eb1c247fa30a6fa570e2b2b85351e379 484 SMART SM00155 397 424 1.9E-6 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VV93_RS06715 eb1c247fa30a6fa570e2b2b85351e379 484 PANTHER PTHR21248:SF9 18 484 1.9E-249 T 23-04-2016 VV93_RS06715 eb1c247fa30a6fa570e2b2b85351e379 484 SUPERFAMILY SSF56024 273 469 3.36E-47 T 23-04-2016 VV93_RS06715 eb1c247fa30a6fa570e2b2b85351e379 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 12 484 1.4E-149 T 23-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 VV93_RS06715 eb1c247fa30a6fa570e2b2b85351e379 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 49.597 T 23-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 VV93_RS06715 eb1c247fa30a6fa570e2b2b85351e379 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 59 3.9E-6 T 23-04-2016 IPR027379 Cardiolipin synthase N-terminal VV93_RS06715 eb1c247fa30a6fa570e2b2b85351e379 484 PANTHER PTHR21248 18 484 1.9E-249 T 23-04-2016 VV93_RS06715 eb1c247fa30a6fa570e2b2b85351e379 484 Gene3D G3DSA:3.30.870.10 113 310 3.4E-37 T 23-04-2016 VV93_RS06715 eb1c247fa30a6fa570e2b2b85351e379 484 Gene3D G3DSA:3.30.870.10 311 459 4.7E-35 T 23-04-2016 VV93_RS06715 eb1c247fa30a6fa570e2b2b85351e379 484 Pfam PF13091 PLD-like domain 325 448 4.5E-24 T 23-04-2016 IPR025202 Phospholipase D-like domain VV93_RS06715 eb1c247fa30a6fa570e2b2b85351e379 484 Pfam PF13091 PLD-like domain 135 266 1.7E-16 T 23-04-2016 IPR025202 Phospholipase D-like domain VV93_RS06715 eb1c247fa30a6fa570e2b2b85351e379 484 SUPERFAMILY SSF56024 67 313 3.66E-50 T 23-04-2016 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 3.8E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 3.8E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 3.8E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.8E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 Gene3D G3DSA:3.40.50.1370 145 319 7.2E-75 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 Gene3D G3DSA:3.40.50.1370 5 144 5.7E-53 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 PANTHER PTHR11405 1 277 8.7E-204 T 23-04-2016 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 PANTHER PTHR11405 297 333 8.7E-204 T 23-04-2016 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 3.9E-58 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 3.6E-133 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 82.489 T 23-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 SUPERFAMILY SSF53671 4 333 2.23E-97 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 1.3E-31 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 1.3E-31 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.3E-31 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.3E-31 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.3E-31 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 9.8E-44 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 PANTHER PTHR11405:SF44 1 277 8.7E-204 T 23-04-2016 VV93_RS13415 f27c2057868300b60857452c8e19ab0e 334 PANTHER PTHR11405:SF44 297 333 8.7E-204 T 23-04-2016 VV93_RS15260 5e32666004c3aff28687637feb65fd9f 144 PANTHER PTHR19384:SF81 2 144 2.4E-29 T 23-04-2016 VV93_RS15260 5e32666004c3aff28687637feb65fd9f 144 SUPERFAMILY SSF52218 2 143 2.39E-38 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS15260 5e32666004c3aff28687637feb65fd9f 144 PANTHER PTHR19384 2 144 2.4E-29 T 23-04-2016 VV93_RS15260 5e32666004c3aff28687637feb65fd9f 144 Pfam PF00258 Flavodoxin 4 136 2.2E-21 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VV93_RS15260 5e32666004c3aff28687637feb65fd9f 144 Gene3D G3DSA:3.40.50.360 2 143 1.3E-33 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS01525 c94963a668b27e60dff7612ef653ebca 294 SUPERFAMILY SSF53448 1 289 2.17E-88 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS01525 c94963a668b27e60dff7612ef653ebca 294 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 289 4.8E-151 T 23-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 VV93_RS01525 c94963a668b27e60dff7612ef653ebca 294 PANTHER PTHR22572 2 294 1.3E-160 T 23-04-2016 VV93_RS01525 c94963a668b27e60dff7612ef653ebca 294 Gene3D G3DSA:3.90.550.10 1 267 1.1E-66 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS01525 c94963a668b27e60dff7612ef653ebca 294 PANTHER PTHR22572:SF105 2 294 1.3E-160 T 23-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 VV93_RS01525 c94963a668b27e60dff7612ef653ebca 294 Pfam PF00483 Nucleotidyl transferase 2 240 1.2E-72 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VV93_RS08340 cdf5182074dc3f9c1f17c6ddc3cd4757 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 84 1.4E-13 T 23-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VV93_RS08340 cdf5182074dc3f9c1f17c6ddc3cd4757 96 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 84 5.7E-11 T 23-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VV93_RS08340 cdf5182074dc3f9c1f17c6ddc3cd4757 96 PANTHER PTHR35601 1 95 1.6E-42 T 23-04-2016 VV93_RS08340 cdf5182074dc3f9c1f17c6ddc3cd4757 96 SUPERFAMILY SSF143011 1 82 3.92E-23 T 23-04-2016 VV93_RS08340 cdf5182074dc3f9c1f17c6ddc3cd4757 96 PANTHER PTHR35601:SF2 1 95 1.6E-42 T 23-04-2016 VV93_RS00550 757f88f5203c97f1a3a871e2bc40d859 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 4.8E-18 T 23-04-2016 IPR009525 Protein of unknown function DUF1145 VV93_RS00550 757f88f5203c97f1a3a871e2bc40d859 88 PANTHER PTHR38775 2 88 4.1E-26 T 23-04-2016 VV93_RS00550 757f88f5203c97f1a3a871e2bc40d859 88 PANTHER PTHR38775:SF1 2 88 4.1E-26 T 23-04-2016 VV93_RS00590 fa1af02b0aadf24d1a5bb4a1ecd22211 136 PANTHER PTHR35091 22 136 2.7E-37 T 23-04-2016 VV93_RS00590 fa1af02b0aadf24d1a5bb4a1ecd22211 136 PANTHER PTHR35091:SF2 22 136 2.7E-37 T 23-04-2016 VV93_RS00590 fa1af02b0aadf24d1a5bb4a1ecd22211 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 1.3E-19 T 23-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VV93_RS02280 443df3412b5b77a6eced4e016cdce4c7 269 PANTHER PTHR24032 2 264 1.3E-137 T 23-04-2016 VV93_RS02280 443df3412b5b77a6eced4e016cdce4c7 269 SUPERFAMILY SSF56300 4 257 2.36E-53 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like VV93_RS02280 443df3412b5b77a6eced4e016cdce4c7 269 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 269 47.946 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VV93_RS02280 443df3412b5b77a6eced4e016cdce4c7 269 PANTHER PTHR24032:SF27 2 264 1.3E-137 T 23-04-2016 VV93_RS02280 443df3412b5b77a6eced4e016cdce4c7 269 Pfam PF00149 Calcineurin-like phosphoesterase 5 163 3.6E-13 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VV93_RS02280 443df3412b5b77a6eced4e016cdce4c7 269 PIRSF PIRSF000903 1 269 3.0E-122 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VV93_RS02280 443df3412b5b77a6eced4e016cdce4c7 269 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 2 267 2.1E-118 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VV93_RS02280 443df3412b5b77a6eced4e016cdce4c7 269 Gene3D G3DSA:3.60.21.10 4 130 1.1E-54 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like VV93_RS02280 443df3412b5b77a6eced4e016cdce4c7 269 Gene3D G3DSA:3.60.21.10 167 265 1.1E-54 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like VV93_RS02670 1f5831433ca3bcae1be0ada7672c7b14 441 Gene3D G3DSA:1.20.1600.10 24 430 3.3E-81 T 23-04-2016 VV93_RS02670 1f5831433ca3bcae1be0ada7672c7b14 441 PANTHER PTHR30026 1 437 8.4E-139 T 23-04-2016 VV93_RS02670 1f5831433ca3bcae1be0ada7672c7b14 441 SUPERFAMILY SSF56954 1 429 1.7E-91 T 23-04-2016 VV93_RS02670 1f5831433ca3bcae1be0ada7672c7b14 441 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 435 9.0E-105 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 VV93_RS02670 1f5831433ca3bcae1be0ada7672c7b14 441 Pfam PF02321 Outer membrane efflux protein 238 423 9.2E-33 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VV93_RS02670 1f5831433ca3bcae1be0ada7672c7b14 441 Pfam PF02321 Outer membrane efflux protein 25 214 1.3E-25 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VV93_RS02670 1f5831433ca3bcae1be0ada7672c7b14 441 PANTHER PTHR30026:SF3 1 437 8.4E-139 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 VV93_RS02095 62b4bcc7f103e957c5cedf321374a801 185 SUPERFAMILY SSF158710 28 170 1.57E-53 T 23-04-2016 VV93_RS02095 62b4bcc7f103e957c5cedf321374a801 185 Gene3D G3DSA:1.10.60.30 28 102 2.5E-34 T 23-04-2016 IPR023153 PSPTO4464-like domain VV93_RS02095 62b4bcc7f103e957c5cedf321374a801 185 Pfam PF04751 Protein of unknown function (DUF615) 19 168 6.5E-58 T 23-04-2016 IPR006839 Ribosome-associated, YjgA VV93_RS02095 62b4bcc7f103e957c5cedf321374a801 185 PANTHER PTHR38101:SF1 1 183 6.9E-75 T 23-04-2016 VV93_RS02095 62b4bcc7f103e957c5cedf321374a801 185 Gene3D G3DSA:1.10.60.30 104 172 1.2E-28 T 23-04-2016 IPR023153 PSPTO4464-like domain VV93_RS02095 62b4bcc7f103e957c5cedf321374a801 185 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 172 24.003 T 23-04-2016 IPR006839 Ribosome-associated, YjgA VV93_RS02095 62b4bcc7f103e957c5cedf321374a801 185 PANTHER PTHR38101 1 183 6.9E-75 T 23-04-2016 VV93_RS02095 62b4bcc7f103e957c5cedf321374a801 185 PIRSF PIRSF016183 1 175 3.7E-74 T 23-04-2016 IPR006839 Ribosome-associated, YjgA VV93_RS03515 0db84054d3bf18f26d3310a9b2f83495 109 Pfam PF02699 Preprotein translocase subunit 21 98 1.1E-25 T 23-04-2016 IPR003849 Preprotein translocase YajC VV93_RS03515 0db84054d3bf18f26d3310a9b2f83495 109 SMART SM01323 17 101 4.0E-39 T 23-04-2016 IPR003849 Preprotein translocase YajC VV93_RS03515 0db84054d3bf18f26d3310a9b2f83495 109 PANTHER PTHR33909 1 109 6.0E-33 T 23-04-2016 VV93_RS03515 0db84054d3bf18f26d3310a9b2f83495 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 5.5E-30 T 23-04-2016 IPR003849 Preprotein translocase YajC VV93_RS03515 0db84054d3bf18f26d3310a9b2f83495 109 PANTHER PTHR33909:SF1 1 109 6.0E-33 T 23-04-2016 VV93_RS03515 0db84054d3bf18f26d3310a9b2f83495 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 2.4E-15 T 23-04-2016 IPR003849 Preprotein translocase YajC VV93_RS03515 0db84054d3bf18f26d3310a9b2f83495 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 2.4E-15 T 23-04-2016 IPR003849 Preprotein translocase YajC VV93_RS11835 27b60721136b0cf9183e68b1e267892e 184 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 108 3.4E-8 T 23-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VV93_RS11835 27b60721136b0cf9183e68b1e267892e 184 Gene3D G3DSA:3.10.490.10 1 140 2.0E-9 T 23-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VV93_RS11835 27b60721136b0cf9183e68b1e267892e 184 SUPERFAMILY SSF110857 1 123 3.01E-16 T 23-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VV93_RS13735 cadd320f180779242011210ebfb0d254 550 Gene3D G3DSA:1.10.1390.10 503 548 3.2E-22 T 23-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VV93_RS13735 cadd320f180779242011210ebfb0d254 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VV93_RS13735 cadd320f180779242011210ebfb0d254 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VV93_RS13735 cadd320f180779242011210ebfb0d254 550 Pfam PF00342 Phosphoglucose isomerase 53 542 1.6E-254 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VV93_RS13735 cadd320f180779242011210ebfb0d254 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 43.131 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VV93_RS13735 cadd320f180779242011210ebfb0d254 550 Gene3D G3DSA:3.40.50.10490 148 185 7.8E-179 T 23-04-2016 VV93_RS13735 cadd320f180779242011210ebfb0d254 550 Gene3D G3DSA:3.40.50.10490 5 103 7.8E-179 T 23-04-2016 VV93_RS13735 cadd320f180779242011210ebfb0d254 550 Gene3D G3DSA:3.40.50.10490 264 502 7.8E-179 T 23-04-2016 VV93_RS13735 cadd320f180779242011210ebfb0d254 550 SUPERFAMILY SSF53697 6 548 6.95E-227 T 23-04-2016 VV93_RS13735 cadd320f180779242011210ebfb0d254 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 2.2E-56 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VV93_RS13735 cadd320f180779242011210ebfb0d254 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 2.2E-56 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VV93_RS13735 cadd320f180779242011210ebfb0d254 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 2.2E-56 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VV93_RS13735 cadd320f180779242011210ebfb0d254 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 2.2E-56 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VV93_RS13735 cadd320f180779242011210ebfb0d254 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 2.2E-56 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VV93_RS13735 cadd320f180779242011210ebfb0d254 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 2.2E-56 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VV93_RS15300 856f3f4b8cb8cd9703297d2688936a1d 580 Pfam PF01935 Domain of unknown function DUF87 148 407 2.6E-33 T 23-04-2016 IPR002789 Helicase HerA, central domain VV93_RS15300 856f3f4b8cb8cd9703297d2688936a1d 580 SUPERFAMILY SSF52540 147 548 7.75E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15300 856f3f4b8cb8cd9703297d2688936a1d 580 Gene3D G3DSA:3.40.50.300 372 544 9.7E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15300 856f3f4b8cb8cd9703297d2688936a1d 580 Gene3D G3DSA:3.40.50.300 154 253 9.7E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15300 856f3f4b8cb8cd9703297d2688936a1d 580 PANTHER PTHR30121:SF1 116 558 1.8E-51 T 23-04-2016 VV93_RS15300 856f3f4b8cb8cd9703297d2688936a1d 580 PANTHER PTHR30121 116 558 1.8E-51 T 23-04-2016 VV93_RS08740 0533dfd854680315e881de06367d89f0 1014 PANTHER PTHR11748 239 582 7.3E-170 T 23-04-2016 VV93_RS08740 0533dfd854680315e881de06367d89f0 1014 PANTHER PTHR11748 18 198 7.3E-170 T 23-04-2016 VV93_RS08740 0533dfd854680315e881de06367d89f0 1014 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV93_RS08740 0533dfd854680315e881de06367d89f0 1014 SUPERFAMILY SSF46548 649 685 1.26E-6 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VV93_RS08740 0533dfd854680315e881de06367d89f0 1014 SUPERFAMILY SSF46548 571 617 1.26E-6 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VV93_RS08740 0533dfd854680315e881de06367d89f0 1014 Gene3D G3DSA:3.30.465.10 110 277 1.5E-40 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VV93_RS08740 0533dfd854680315e881de06367d89f0 1014 SUPERFAMILY SSF55103 253 538 1.11E-51 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VV93_RS08740 0533dfd854680315e881de06367d89f0 1014 Gene3D G3DSA:3.30.43.10 6 109 1.8E-24 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 VV93_RS08740 0533dfd854680315e881de06367d89f0 1014 SUPERFAMILY SSF56176 18 192 3.6E-50 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VV93_RS08740 0533dfd854680315e881de06367d89f0 1014 SUPERFAMILY SSF56176 235 277 3.6E-50 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VV93_RS08740 0533dfd854680315e881de06367d89f0 1014 PANTHER PTHR11748:SF35 239 582 7.3E-170 T 23-04-2016 VV93_RS08740 0533dfd854680315e881de06367d89f0 1014 PANTHER PTHR11748:SF35 18 198 7.3E-170 T 23-04-2016 VV93_RS08740 0533dfd854680315e881de06367d89f0 1014 Pfam PF01565 FAD binding domain 52 191 2.8E-35 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VV93_RS08740 0533dfd854680315e881de06367d89f0 1014 Pfam PF13183 4Fe-4S dicluster domain 570 681 4.5E-12 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV93_RS08740 0533dfd854680315e881de06367d89f0 1014 Gene3D G3DSA:1.10.1060.10 511 614 3.0E-14 T 23-04-2016 VV93_RS08740 0533dfd854680315e881de06367d89f0 1014 Gene3D G3DSA:1.10.1060.10 646 695 3.0E-14 T 23-04-2016 VV93_RS08740 0533dfd854680315e881de06367d89f0 1014 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 4.9E-60 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 VV93_RS00500 0272060e92c6b476d0cf019e1a59b149 111 PANTHER PTHR33154 7 96 3.2E-19 T 23-04-2016 VV93_RS00500 0272060e92c6b476d0cf019e1a59b149 111 SMART SM00418 5 83 4.0E-25 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV93_RS00500 0272060e92c6b476d0cf019e1a59b149 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 4.0E-12 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV93_RS00500 0272060e92c6b476d0cf019e1a59b149 111 SUPERFAMILY SSF46785 5 88 3.39E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS00500 0272060e92c6b476d0cf019e1a59b149 111 Gene3D G3DSA:1.10.10.10 5 86 2.5E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS00500 0272060e92c6b476d0cf019e1a59b149 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 2.0E-18 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV93_RS00500 0272060e92c6b476d0cf019e1a59b149 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 2.0E-18 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV93_RS00500 0272060e92c6b476d0cf019e1a59b149 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 2.0E-18 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV93_RS00500 0272060e92c6b476d0cf019e1a59b149 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 2.0E-18 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV93_RS00500 0272060e92c6b476d0cf019e1a59b149 111 PANTHER PTHR33154:SF4 7 96 3.2E-19 T 23-04-2016 VV93_RS05445 23b5dda300bc783073441895508dddb2 657 Gene3D G3DSA:3.40.190.10 41 121 1.8E-8 T 23-04-2016 VV93_RS05445 23b5dda300bc783073441895508dddb2 657 SUPERFAMILY SSF55073 513 652 1.88E-27 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS05445 23b5dda300bc783073441895508dddb2 657 Gene3D G3DSA:3.40.190.10 361 416 1.4E-6 T 23-04-2016 VV93_RS05445 23b5dda300bc783073441895508dddb2 657 Gene3D G3DSA:3.30.70.270 509 653 1.3E-30 T 23-04-2016 VV93_RS05445 23b5dda300bc783073441895508dddb2 657 SUPERFAMILY SSF53850 252 465 1.13E-25 T 23-04-2016 VV93_RS05445 23b5dda300bc783073441895508dddb2 657 SMART SM00062 26 220 3.4E-8 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV93_RS05445 23b5dda300bc783073441895508dddb2 657 SMART SM00267 497 656 5.2E-23 T 23-04-2016 IPR000160 GGDEF domain VV93_RS05445 23b5dda300bc783073441895508dddb2 657 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 505 653 1.7E-27 T 23-04-2016 IPR000160 GGDEF domain VV93_RS05445 23b5dda300bc783073441895508dddb2 657 Pfam PF00990 Diguanylate cyclase, GGDEF domain 509 653 1.8E-26 T 23-04-2016 IPR000160 GGDEF domain VV93_RS05445 23b5dda300bc783073441895508dddb2 657 Gene3D G3DSA:3.40.190.10 246 360 1.2E-11 T 23-04-2016 VV93_RS05445 23b5dda300bc783073441895508dddb2 657 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 183 4.2E-19 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV93_RS05445 23b5dda300bc783073441895508dddb2 657 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 255 436 5.2E-21 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV93_RS05445 23b5dda300bc783073441895508dddb2 657 SUPERFAMILY SSF53850 41 209 3.57E-23 T 23-04-2016 VV93_RS05445 23b5dda300bc783073441895508dddb2 657 Gene3D G3DSA:3.40.190.10 122 180 2.8E-5 T 23-04-2016 VV93_RS02730 b6f736e2b46edfae7540d6397f46b3a5 130 SUPERFAMILY SSF54211 5 130 7.97E-48 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS02730 b6f736e2b46edfae7540d6397f46b3a5 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.7E-46 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 VV93_RS02730 b6f736e2b46edfae7540d6397f46b3a5 130 Gene3D G3DSA:3.30.230.10 4 130 1.1E-50 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV93_RS02730 b6f736e2b46edfae7540d6397f46b3a5 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.501 T 23-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid VV93_RS02730 b6f736e2b46edfae7540d6397f46b3a5 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 23-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 VV93_RS02730 b6f736e2b46edfae7540d6397f46b3a5 130 PANTHER PTHR21569 1 130 5.5E-71 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 VV93_RS02250 e3aad298f1f3d8c38241881c09c62f66 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-44 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS02250 e3aad298f1f3d8c38241881c09c62f66 103 SUPERFAMILY SSF141091 1 102 9.94E-39 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 VV93_RS02250 e3aad298f1f3d8c38241881c09c62f66 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.6E-40 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 VV93_RS02250 e3aad298f1f3d8c38241881c09c62f66 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.497 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS02250 e3aad298f1f3d8c38241881c09c62f66 103 PANTHER PTHR21349 1 101 2.1E-48 T 23-04-2016 VV93_RS02250 e3aad298f1f3d8c38241881c09c62f66 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 23-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS12755 2d7f84d93094f4888391bee6bf842399 208 PANTHER PTHR11579 7 203 3.6E-81 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VV93_RS12755 2d7f84d93094f4888391bee6bf842399 208 Gene3D G3DSA:3.40.50.150 15 204 7.7E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS12755 2d7f84d93094f4888391bee6bf842399 208 SUPERFAMILY SSF53335 13 204 4.56E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS12755 2d7f84d93094f4888391bee6bf842399 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 203 2.0E-67 T 23-04-2016 VV93_RS12755 2d7f84d93094f4888391bee6bf842399 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 37.793 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VV93_RS12755 2d7f84d93094f4888391bee6bf842399 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VV93_RS12755 2d7f84d93094f4888391bee6bf842399 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 3 206 2.1E-76 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VV93_RS09490 147742d2710f5769c0228ab22310a6e3 161 PANTHER PTHR18964 7 138 5.6E-21 T 23-04-2016 VV93_RS09490 147742d2710f5769c0228ab22310a6e3 161 PANTHER PTHR18964:SF139 7 138 5.6E-21 T 23-04-2016 VV93_RS09490 147742d2710f5769c0228ab22310a6e3 161 Gene3D G3DSA:1.10.10.10 2 139 3.3E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS09490 147742d2710f5769c0228ab22310a6e3 161 SUPERFAMILY SSF46785 5 140 9.71E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS09490 147742d2710f5769c0228ab22310a6e3 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 5.0E-5 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV93_RS09490 147742d2710f5769c0228ab22310a6e3 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 5.0E-5 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV93_RS09490 147742d2710f5769c0228ab22310a6e3 161 Pfam PF01047 MarR family 31 89 1.6E-14 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV93_RS09490 147742d2710f5769c0228ab22310a6e3 161 SMART SM00347 24 124 1.6E-18 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV93_RS02975 17363fdcef7a4d56c89a7bf17975f43d 160 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 3.1E-42 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VV93_RS02975 17363fdcef7a4d56c89a7bf17975f43d 160 PANTHER PTHR33254 5 160 8.8E-84 T 23-04-2016 VV93_RS02975 17363fdcef7a4d56c89a7bf17975f43d 160 PANTHER PTHR33254:SF1 5 160 8.8E-84 T 23-04-2016 VV93_RS02975 17363fdcef7a4d56c89a7bf17975f43d 160 Gene3D G3DSA:3.50.30.40 5 156 1.2E-48 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VV93_RS02975 17363fdcef7a4d56c89a7bf17975f43d 160 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.1E-71 T 23-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VV93_RS02975 17363fdcef7a4d56c89a7bf17975f43d 160 SUPERFAMILY SSF89562 1 155 3.14E-47 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VV93_RS02645 57a2bd3ca7dcce7a5fe17873ab654b99 505 PANTHER PTHR39569 2 505 2.5E-145 T 23-04-2016 VV93_RS02645 57a2bd3ca7dcce7a5fe17873ab654b99 505 Pfam PF05235 CHAD domain 231 432 3.6E-6 T 23-04-2016 IPR007899 CHAD domain VV93_RS02645 57a2bd3ca7dcce7a5fe17873ab654b99 505 PANTHER PTHR39569:SF1 2 505 2.5E-145 T 23-04-2016 VV93_RS02645 57a2bd3ca7dcce7a5fe17873ab654b99 505 SMART SM00880 229 497 4.8E-29 T 23-04-2016 IPR007899 CHAD domain VV93_RS02645 57a2bd3ca7dcce7a5fe17873ab654b99 505 SMART SM01118 2 203 3.6E-43 T 23-04-2016 IPR023577 CYTH domain VV93_RS02645 57a2bd3ca7dcce7a5fe17873ab654b99 505 Pfam PF01928 CYTH domain 3 197 9.4E-34 T 23-04-2016 IPR023577 CYTH domain VV93_RS02645 57a2bd3ca7dcce7a5fe17873ab654b99 505 SUPERFAMILY SSF55154 1 214 8.67E-50 T 23-04-2016 IPR033469 CYTH-like domain VV93_RS02645 57a2bd3ca7dcce7a5fe17873ab654b99 505 Gene3D G3DSA:2.40.320.10 1 211 3.4E-37 T 23-04-2016 IPR023577 CYTH domain VV93_RS03060 157f1611d3d42a0bee158bf04ddf1078 264 Gene3D G3DSA:3.40.30.10 129 263 7.9E-45 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS03060 157f1611d3d42a0bee158bf04ddf1078 264 ProSitePatterns PS00194 Thioredoxin family active site. 140 158 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VV93_RS03060 157f1611d3d42a0bee158bf04ddf1078 264 SUPERFAMILY SSF54423 47 103 1.96E-13 T 23-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VV93_RS03060 157f1611d3d42a0bee158bf04ddf1078 264 PANTHER PTHR35272:SF3 6 264 1.1E-89 T 23-04-2016 VV93_RS03060 157f1611d3d42a0bee158bf04ddf1078 264 SUPERFAMILY SSF52833 123 263 2.23E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS03060 157f1611d3d42a0bee158bf04ddf1078 264 Pfam PF13098 Thioredoxin-like domain 133 261 2.8E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS03060 157f1611d3d42a0bee158bf04ddf1078 264 Gene3D G3DSA:3.10.450.70 46 103 3.4E-21 T 23-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal VV93_RS03060 157f1611d3d42a0bee158bf04ddf1078 264 Pfam PF10411 Disulfide bond isomerase protein N-terminus 51 101 1.0E-12 T 23-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VV93_RS03060 157f1611d3d42a0bee158bf04ddf1078 264 PANTHER PTHR35272 6 264 1.1E-89 T 23-04-2016 VV93_RS00095 f199b1b5b68a0a5c82a8e0cd84f99a0b 207 PANTHER PTHR16301 1 201 2.6E-62 T 23-04-2016 IPR023582 Impact family VV93_RS00095 f199b1b5b68a0a5c82a8e0cd84f99a0b 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 199 5.2E-70 T 23-04-2016 IPR015796 Impact family, bacterial/archaeal VV93_RS00095 f199b1b5b68a0a5c82a8e0cd84f99a0b 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 1.5E-25 T 23-04-2016 IPR001498 Impact, N-terminal VV93_RS00095 f199b1b5b68a0a5c82a8e0cd84f99a0b 207 SUPERFAMILY SSF54980 139 201 1.58E-9 T 23-04-2016 IPR009022 Elongation factor G, III-V domain VV93_RS00095 f199b1b5b68a0a5c82a8e0cd84f99a0b 207 SUPERFAMILY SSF54211 5 134 1.9E-43 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS00095 f199b1b5b68a0a5c82a8e0cd84f99a0b 207 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 82 111 - T 23-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site VV93_RS00095 f199b1b5b68a0a5c82a8e0cd84f99a0b 207 Gene3D G3DSA:3.30.230.30 6 135 4.1E-44 T 23-04-2016 IPR001498 Impact, N-terminal VV93_RS00095 f199b1b5b68a0a5c82a8e0cd84f99a0b 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 198 3.3E-12 T 23-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal VV93_RS00095 f199b1b5b68a0a5c82a8e0cd84f99a0b 207 Gene3D G3DSA:3.30.70.240 139 203 1.5E-9 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain VV93_RS04430 b09446c7458d140222c53fe241b126d7 291 PANTHER PTHR18895:SF64 5 281 1.5E-108 T 23-04-2016 VV93_RS04430 b09446c7458d140222c53fe241b126d7 291 Pfam PF13847 Methyltransferase domain 116 247 2.4E-16 T 23-04-2016 IPR025714 Methyltransferase domain VV93_RS04430 b09446c7458d140222c53fe241b126d7 291 Gene3D G3DSA:3.40.50.150 92 280 2.0E-66 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS04430 b09446c7458d140222c53fe241b126d7 291 SUPERFAMILY SSF53335 9 279 9.39E-59 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS04430 b09446c7458d140222c53fe241b126d7 291 PANTHER PTHR18895 5 281 1.5E-108 T 23-04-2016 VV93_RS04430 b09446c7458d140222c53fe241b126d7 291 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 281 2.5E-81 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VV93_RS04430 b09446c7458d140222c53fe241b126d7 291 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV93_RS04430 b09446c7458d140222c53fe241b126d7 291 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 278 7.2E-93 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VV93_RS04430 b09446c7458d140222c53fe241b126d7 291 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 282 45.001 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VV93_RS04430 b09446c7458d140222c53fe241b126d7 291 Gene3D G3DSA:1.10.8.10 5 90 8.1E-32 T 23-04-2016 VV93_RS10285 0bd5ea38543ca96da78d256df0706480 106 Gene3D G3DSA:3.30.1390.10 4 106 1.4E-43 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VV93_RS10285 0bd5ea38543ca96da78d256df0706480 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 3.4E-34 T 23-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 VV93_RS10285 0bd5ea38543ca96da78d256df0706480 106 PANTHER PTHR33473 1 106 9.3E-40 T 23-04-2016 VV93_RS10285 0bd5ea38543ca96da78d256df0706480 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 101 27.258 T 23-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS VV93_RS10285 0bd5ea38543ca96da78d256df0706480 106 SUPERFAMILY SSF54736 21 105 6.8E-32 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VV93_RS08045 c33e1f8def1eefe251da4a3ac5b98d66 343 Gene3D G3DSA:3.40.190.10 144 287 2.5E-57 T 23-04-2016 VV93_RS08045 c33e1f8def1eefe251da4a3ac5b98d66 343 PIRSF PIRSF019574 1 343 3.1E-109 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08045 c33e1f8def1eefe251da4a3ac5b98d66 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 301 6.4E-38 T 23-04-2016 VV93_RS08045 c33e1f8def1eefe251da4a3ac5b98d66 343 SUPERFAMILY SSF53850 26 330 5.65E-86 T 23-04-2016 VV93_RS08045 c33e1f8def1eefe251da4a3ac5b98d66 343 PANTHER PTHR30222 1 338 1.8E-162 T 23-04-2016 VV93_RS08045 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 5.9E-71 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08045 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 5.9E-71 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08045 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 5.9E-71 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08045 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 5.9E-71 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08045 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 5.9E-71 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08045 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 5.9E-71 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08045 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 5.9E-71 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08045 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 5.9E-71 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08045 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 5.9E-71 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08045 c33e1f8def1eefe251da4a3ac5b98d66 343 Gene3D G3DSA:3.40.190.10 27 143 9.8E-24 T 23-04-2016 VV93_RS08045 c33e1f8def1eefe251da4a3ac5b98d66 343 PANTHER PTHR30222:SF10 1 338 1.8E-162 T 23-04-2016 VV93_RS03075 4d5c31e45363f0d9243f1c79588fc5a8 510 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 509 1.7E-199 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 VV93_RS03075 4d5c31e45363f0d9243f1c79588fc5a8 510 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 24 509 43.193 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 VV93_RS03075 4d5c31e45363f0d9243f1c79588fc5a8 510 Pfam PF01336 OB-fold nucleic acid binding domain 73 145 8.1E-8 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VV93_RS03075 4d5c31e45363f0d9243f1c79588fc5a8 510 Gene3D G3DSA:2.40.50.140 19 153 2.0E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS03075 4d5c31e45363f0d9243f1c79588fc5a8 510 PANTHER PTHR22594:SF4 6 509 9.7E-264 T 23-04-2016 VV93_RS03075 4d5c31e45363f0d9243f1c79588fc5a8 510 SUPERFAMILY SSF50249 16 154 1.27E-33 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS03075 4d5c31e45363f0d9243f1c79588fc5a8 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 8.11E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VV93_RS03075 4d5c31e45363f0d9243f1c79588fc5a8 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 8.11E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VV93_RS03075 4d5c31e45363f0d9243f1c79588fc5a8 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 8.11E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VV93_RS03075 4d5c31e45363f0d9243f1c79588fc5a8 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 8.11E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VV93_RS03075 4d5c31e45363f0d9243f1c79588fc5a8 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 8.11E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VV93_RS03075 4d5c31e45363f0d9243f1c79588fc5a8 510 SUPERFAMILY SSF55681 161 507 1.57E-118 T 23-04-2016 VV93_RS03075 4d5c31e45363f0d9243f1c79588fc5a8 510 PANTHER PTHR22594 6 509 9.7E-264 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS03075 4d5c31e45363f0d9243f1c79588fc5a8 510 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 506 1.3E-80 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS03075 4d5c31e45363f0d9243f1c79588fc5a8 510 Gene3D G3DSA:3.30.930.10 156 505 5.8E-120 T 23-04-2016 VV93_RS15200 835f58a5d222325893b5d904a80af08d 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.971 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VV93_RS15200 835f58a5d222325893b5d904a80af08d 288 Gene3D G3DSA:1.10.287.80 203 236 1.5E-40 T 23-04-2016 VV93_RS15200 835f58a5d222325893b5d904a80af08d 288 Gene3D G3DSA:1.10.287.80 19 60 1.5E-40 T 23-04-2016 VV93_RS15200 835f58a5d222325893b5d904a80af08d 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 5.47E-37 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VV93_RS15200 835f58a5d222325893b5d904a80af08d 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 5.47E-37 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VV93_RS15200 835f58a5d222325893b5d904a80af08d 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 5.47E-37 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VV93_RS15200 835f58a5d222325893b5d904a80af08d 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 5.47E-37 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VV93_RS15200 835f58a5d222325893b5d904a80af08d 288 PANTHER PTHR11693 1 288 2.7E-131 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VV93_RS15200 835f58a5d222325893b5d904a80af08d 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 1.9E-112 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VV93_RS15200 835f58a5d222325893b5d904a80af08d 288 SUPERFAMILY SSF52943 2 288 1.47E-96 T 23-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain VV93_RS15200 835f58a5d222325893b5d904a80af08d 288 Gene3D G3DSA:1.10.287.80 237 283 1.4E-30 T 23-04-2016 VV93_RS15200 835f58a5d222325893b5d904a80af08d 288 Pfam PF00231 ATP synthase 5 287 1.1E-93 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VV93_RS15200 835f58a5d222325893b5d904a80af08d 288 Gene3D G3DSA:3.40.1380.10 64 191 7.6E-45 T 23-04-2016 VV93_RS15200 835f58a5d222325893b5d904a80af08d 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 23-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site VV93_RS14735 aacdbf44ede3a6b7826f4cce253fe5cc 446 Gene3D G3DSA:3.30.870.10 247 407 4.7E-21 T 23-04-2016 VV93_RS14735 aacdbf44ede3a6b7826f4cce253fe5cc 446 Gene3D G3DSA:3.30.870.10 20 179 6.1E-17 T 23-04-2016 VV93_RS14735 aacdbf44ede3a6b7826f4cce253fe5cc 446 SUPERFAMILY SSF56024 248 392 1.05E-25 T 23-04-2016 VV93_RS14735 aacdbf44ede3a6b7826f4cce253fe5cc 446 PANTHER PTHR12586 9 445 2.3E-228 T 23-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VV93_RS14735 aacdbf44ede3a6b7826f4cce253fe5cc 446 Pfam PF13091 PLD-like domain 34 146 6.3E-7 T 23-04-2016 IPR025202 Phospholipase D-like domain VV93_RS14735 aacdbf44ede3a6b7826f4cce253fe5cc 446 Pfam PF13091 PLD-like domain 252 402 1.1E-25 T 23-04-2016 IPR025202 Phospholipase D-like domain VV93_RS14735 aacdbf44ede3a6b7826f4cce253fe5cc 446 PANTHER PTHR12586:SF3 9 445 2.3E-228 T 23-04-2016 VV93_RS14735 aacdbf44ede3a6b7826f4cce253fe5cc 446 PIRSF PIRSF000850 2 446 3.5E-213 T 23-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VV93_RS14735 aacdbf44ede3a6b7826f4cce253fe5cc 446 SUPERFAMILY SSF56024 8 179 2.15E-27 T 23-04-2016 VV93_RS14735 aacdbf44ede3a6b7826f4cce253fe5cc 446 SMART SM00155 347 374 0.0047 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VV93_RS14735 aacdbf44ede3a6b7826f4cce253fe5cc 446 SMART SM00155 126 152 5.3E-4 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VV93_RS13070 fd869186248617da1c587d79ecfffb0f 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 7.5E-47 T 23-04-2016 IPR025218 Domain of unknown function DUF4426 VV93_RS04510 e8df1c9297d6abfe68287a59b8d82d81 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 9.7E-28 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VV93_RS04510 e8df1c9297d6abfe68287a59b8d82d81 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 9.7E-28 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VV93_RS04510 e8df1c9297d6abfe68287a59b8d82d81 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 9.7E-28 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VV93_RS04510 e8df1c9297d6abfe68287a59b8d82d81 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 9.7E-28 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VV93_RS04510 e8df1c9297d6abfe68287a59b8d82d81 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 9.7E-28 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VV93_RS04510 e8df1c9297d6abfe68287a59b8d82d81 474 SUPERFAMILY SSF48163 302 464 1.23E-48 T 23-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VV93_RS04510 e8df1c9297d6abfe68287a59b8d82d81 474 Gene3D G3DSA:1.10.1160.10 236 316 4.5E-35 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 VV93_RS04510 e8df1c9297d6abfe68287a59b8d82d81 474 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 465 2.1E-196 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VV93_RS04510 e8df1c9297d6abfe68287a59b8d82d81 474 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 464 33.673 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VV93_RS04510 e8df1c9297d6abfe68287a59b8d82d81 474 Gene3D G3DSA:3.40.50.620 184 233 5.2E-55 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS04510 e8df1c9297d6abfe68287a59b8d82d81 474 Gene3D G3DSA:3.40.50.620 2 67 5.2E-55 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS04510 e8df1c9297d6abfe68287a59b8d82d81 474 PANTHER PTHR11451:SF41 3 316 1.2E-100 T 23-04-2016 VV93_RS04510 e8df1c9297d6abfe68287a59b8d82d81 474 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS04510 e8df1c9297d6abfe68287a59b8d82d81 474 PANTHER PTHR11451 3 316 1.2E-100 T 23-04-2016 VV93_RS04510 e8df1c9297d6abfe68287a59b8d82d81 474 Gene3D G3DSA:3.90.800.10 68 183 2.8E-36 T 23-04-2016 VV93_RS04510 e8df1c9297d6abfe68287a59b8d82d81 474 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 2.8E-114 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VV93_RS04510 e8df1c9297d6abfe68287a59b8d82d81 474 Gene3D G3DSA:1.10.10.350 366 464 4.6E-32 T 23-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VV93_RS04510 e8df1c9297d6abfe68287a59b8d82d81 474 SUPERFAMILY SSF52374 3 301 3.22E-108 T 23-04-2016 VV93_RS00300 a4a006b3a2fd32d24f8da5d51670e603 335 Gene3D G3DSA:3.40.50.2300 66 177 1.6E-36 T 23-04-2016 VV93_RS00300 a4a006b3a2fd32d24f8da5d51670e603 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 3.0E-17 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS00300 a4a006b3a2fd32d24f8da5d51670e603 335 Gene3D G3DSA:1.10.260.40 9 64 1.3E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS00300 a4a006b3a2fd32d24f8da5d51670e603 335 PANTHER PTHR30146 9 335 1.8E-167 T 23-04-2016 VV93_RS00300 a4a006b3a2fd32d24f8da5d51670e603 335 SUPERFAMILY SSF47413 9 67 8.04E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS00300 a4a006b3a2fd32d24f8da5d51670e603 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS00300 a4a006b3a2fd32d24f8da5d51670e603 335 Gene3D G3DSA:3.40.50.2300 178 335 2.3E-42 T 23-04-2016 VV93_RS00300 a4a006b3a2fd32d24f8da5d51670e603 335 SUPERFAMILY SSF53822 67 322 2.57E-55 T 23-04-2016 IPR028082 Periplasmic binding protein-like I VV93_RS00300 a4a006b3a2fd32d24f8da5d51670e603 335 PANTHER PTHR30146:SF2 9 335 1.8E-167 T 23-04-2016 VV93_RS00300 a4a006b3a2fd32d24f8da5d51670e603 335 SMART SM00354 9 79 3.8E-26 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS00300 a4a006b3a2fd32d24f8da5d51670e603 335 Pfam PF13377 Periplasmic binding protein-like domain 176 335 4.3E-29 T 23-04-2016 VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.188 T 23-04-2016 IPR026593 Protein translocase subunit SecY VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 Gene3D G3DSA:1.10.3370.10 15 438 1.0E-163 T 23-04-2016 IPR023201 SecY subunit domain VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 PANTHER PTHR10906 17 444 1.6E-229 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.9E-95 T 23-04-2016 VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-95 T 23-04-2016 VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.9E-95 T 23-04-2016 VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.9E-95 T 23-04-2016 VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.9E-95 T 23-04-2016 VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.9E-95 T 23-04-2016 VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-95 T 23-04-2016 VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.9E-95 T 23-04-2016 VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-95 T 23-04-2016 VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 23-04-2016 IPR030659 SecY conserved site VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 PIRSF PIRSF004557 10 442 1.2E-121 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 PANTHER PTHR10906:SF2 17 444 1.6E-229 T 23-04-2016 VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 23-04-2016 IPR030659 SecY conserved site VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 Pfam PF00344 SecY translocase 76 418 3.6E-118 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 SUPERFAMILY SSF103491 15 425 7.06E-131 T 23-04-2016 IPR023201 SecY subunit domain VV93_RS01900 bdad69aaaab1403a5c9fcb34ac7b740f 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 5.7E-134 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VV93_RS04205 fb61ea8f8fac6bb1ac12c766f1e52fac 561 Gene3D G3DSA:2.60.40.1180 481 559 9.6E-20 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta VV93_RS04205 fb61ea8f8fac6bb1ac12c766f1e52fac 561 SUPERFAMILY SSF51011 480 559 4.32E-17 T 23-04-2016 VV93_RS04205 fb61ea8f8fac6bb1ac12c766f1e52fac 561 SMART SM00642 18 419 2.0E-165 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV93_RS04205 fb61ea8f8fac6bb1ac12c766f1e52fac 561 SUPERFAMILY SSF51445 9 477 6.73E-164 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily VV93_RS04205 fb61ea8f8fac6bb1ac12c766f1e52fac 561 PANTHER PTHR10357 456 561 3.5E-270 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VV93_RS04205 fb61ea8f8fac6bb1ac12c766f1e52fac 561 PANTHER PTHR10357 1 424 3.5E-270 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VV93_RS04205 fb61ea8f8fac6bb1ac12c766f1e52fac 561 Gene3D G3DSA:3.90.400.10 110 179 1.6E-32 T 23-04-2016 VV93_RS04205 fb61ea8f8fac6bb1ac12c766f1e52fac 561 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 557 4.1E-271 T 23-04-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 VV93_RS04205 fb61ea8f8fac6bb1ac12c766f1e52fac 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 556 3.7E-7 T 23-04-2016 IPR032091 Maltogenic Amylase, C-terminal VV93_RS04205 fb61ea8f8fac6bb1ac12c766f1e52fac 561 Gene3D G3DSA:3.20.20.80 8 109 8.5E-128 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VV93_RS04205 fb61ea8f8fac6bb1ac12c766f1e52fac 561 Gene3D G3DSA:3.20.20.80 180 479 8.5E-128 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VV93_RS04205 fb61ea8f8fac6bb1ac12c766f1e52fac 561 Pfam PF00128 Alpha amylase, catalytic domain 33 375 4.2E-128 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV93_RS04205 fb61ea8f8fac6bb1ac12c766f1e52fac 561 PANTHER PTHR10357:SF170 456 561 3.5E-270 T 23-04-2016 VV93_RS04205 fb61ea8f8fac6bb1ac12c766f1e52fac 561 PANTHER PTHR10357:SF170 1 424 3.5E-270 T 23-04-2016 VV93_RS04035 5636ab591e88a17aac089e29544034c7 379 SUPERFAMILY SSF88697 286 376 3.37E-25 T 23-04-2016 IPR015947 PUA-like domain VV93_RS04035 5636ab591e88a17aac089e29544034c7 379 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 2.3E-55 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VV93_RS04035 5636ab591e88a17aac089e29544034c7 379 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 2.3E-55 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VV93_RS04035 5636ab591e88a17aac089e29544034c7 379 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 2.3E-55 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VV93_RS04035 5636ab591e88a17aac089e29544034c7 379 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 2.3E-55 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VV93_RS04035 5636ab591e88a17aac089e29544034c7 379 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 2.3E-55 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VV93_RS04035 5636ab591e88a17aac089e29544034c7 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 14 376 1.6E-148 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VV93_RS04035 5636ab591e88a17aac089e29544034c7 379 PIRSF PIRSF000729 9 378 1.8E-138 T 23-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VV93_RS04035 5636ab591e88a17aac089e29544034c7 379 PANTHER PTHR11063 15 379 7.3E-138 T 23-04-2016 VV93_RS04035 5636ab591e88a17aac089e29544034c7 379 Pfam PF01472 PUA domain 286 360 3.0E-25 T 23-04-2016 IPR002478 PUA domain GO:0003723 VV93_RS04035 5636ab591e88a17aac089e29544034c7 379 Pfam PF00696 Amino acid kinase family 14 243 7.3E-45 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS04035 5636ab591e88a17aac089e29544034c7 379 SUPERFAMILY SSF53633 14 265 5.11E-67 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS04035 5636ab591e88a17aac089e29544034c7 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 23-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VV93_RS04035 5636ab591e88a17aac089e29544034c7 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 14 267 36.04 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VV93_RS04035 5636ab591e88a17aac089e29544034c7 379 Gene3D G3DSA:2.30.130.10 284 375 3.1E-26 T 23-04-2016 IPR015947 PUA-like domain VV93_RS04035 5636ab591e88a17aac089e29544034c7 379 SMART SM00359 286 369 1.1E-20 T 23-04-2016 IPR002478 PUA domain GO:0003723 VV93_RS04035 5636ab591e88a17aac089e29544034c7 379 Gene3D G3DSA:3.40.1160.10 12 269 2.8E-59 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS12565 a48f71f4856d63a29e5e29b3eed752eb 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 388 407 7.9E-21 T 23-04-2016 IPR003004 GspF/PilC family VV93_RS12565 a48f71f4856d63a29e5e29b3eed752eb 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 7.9E-21 T 23-04-2016 IPR003004 GspF/PilC family VV93_RS12565 a48f71f4856d63a29e5e29b3eed752eb 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 7.9E-21 T 23-04-2016 IPR003004 GspF/PilC family VV93_RS12565 a48f71f4856d63a29e5e29b3eed752eb 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 372 386 7.9E-21 T 23-04-2016 IPR003004 GspF/PilC family VV93_RS12565 a48f71f4856d63a29e5e29b3eed752eb 408 Pfam PF00482 Type II secretion system (T2SS), protein F 277 399 2.0E-26 T 23-04-2016 IPR018076 Type II secretion system F domain VV93_RS12565 a48f71f4856d63a29e5e29b3eed752eb 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 4.6E-30 T 23-04-2016 IPR018076 Type II secretion system F domain VV93_RS12565 a48f71f4856d63a29e5e29b3eed752eb 408 PANTHER PTHR30012:SF0 10 408 5.6E-154 T 23-04-2016 VV93_RS12565 a48f71f4856d63a29e5e29b3eed752eb 408 PANTHER PTHR30012 10 408 5.6E-154 T 23-04-2016 VV93_RS12565 a48f71f4856d63a29e5e29b3eed752eb 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 23-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VV93_RS03495 29663e566b35fc77d5ac55b69ea0bd2a 151 PANTHER PTHR11911 1 139 5.4E-44 T 23-04-2016 VV93_RS03495 29663e566b35fc77d5ac55b69ea0bd2a 151 Gene3D G3DSA:3.10.580.10 2 139 8.6E-33 T 23-04-2016 VV93_RS03495 29663e566b35fc77d5ac55b69ea0bd2a 151 Pfam PF00571 CBS domain 79 127 9.9E-10 T 23-04-2016 IPR000644 CBS domain VV93_RS03495 29663e566b35fc77d5ac55b69ea0bd2a 151 Pfam PF00571 CBS domain 4 58 1.2E-13 T 23-04-2016 IPR000644 CBS domain VV93_RS03495 29663e566b35fc77d5ac55b69ea0bd2a 151 PANTHER PTHR11911:SF90 1 139 5.4E-44 T 23-04-2016 VV93_RS03495 29663e566b35fc77d5ac55b69ea0bd2a 151 SMART SM00116 84 131 6.1E-6 T 23-04-2016 IPR000644 CBS domain VV93_RS03495 29663e566b35fc77d5ac55b69ea0bd2a 151 SMART SM00116 11 59 5.9E-9 T 23-04-2016 IPR000644 CBS domain VV93_RS03495 29663e566b35fc77d5ac55b69ea0bd2a 151 SUPERFAMILY SSF54631 1 132 1.77E-33 T 23-04-2016 VV93_RS02320 db33e068d98ba6c5ad2b48e8734d498d 200 PANTHER PTHR11670 1 200 2.2E-117 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02320 db33e068d98ba6c5ad2b48e8734d498d 200 PANTHER PTHR11670:SF27 1 200 2.2E-117 T 23-04-2016 VV93_RS02320 db33e068d98ba6c5ad2b48e8734d498d 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 2.2E-97 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02320 db33e068d98ba6c5ad2b48e8734d498d 200 SUPERFAMILY SSF52016 1 193 5.49E-60 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VV93_RS02320 db33e068d98ba6c5ad2b48e8734d498d 200 Gene3D G3DSA:3.20.19.10 1 193 2.2E-49 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VV93_RS02320 db33e068d98ba6c5ad2b48e8734d498d 200 Pfam PF00694 Aconitase C-terminal domain 1 125 9.8E-39 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02320 db33e068d98ba6c5ad2b48e8734d498d 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.059 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VV93_RS02655 631cb01b8e7c2cc7f0f20664f1565dc0 418 SMART SM00283 156 417 1.1E-67 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS02655 631cb01b8e7c2cc7f0f20664f1565dc0 418 Gene3D G3DSA:1.10.287.950 174 386 2.5E-59 T 23-04-2016 VV93_RS02655 631cb01b8e7c2cc7f0f20664f1565dc0 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 2.6E-22 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VV93_RS02655 631cb01b8e7c2cc7f0f20664f1565dc0 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 2.6E-22 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VV93_RS02655 631cb01b8e7c2cc7f0f20664f1565dc0 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 2.6E-22 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VV93_RS02655 631cb01b8e7c2cc7f0f20664f1565dc0 418 PANTHER PTHR32089:SF64 48 418 1.1E-116 T 23-04-2016 VV93_RS02655 631cb01b8e7c2cc7f0f20664f1565dc0 418 SUPERFAMILY SSF58104 109 418 9.42E-76 T 23-04-2016 VV93_RS02655 631cb01b8e7c2cc7f0f20664f1565dc0 418 PANTHER PTHR32089 48 418 1.1E-116 T 23-04-2016 VV93_RS02655 631cb01b8e7c2cc7f0f20664f1565dc0 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 202 416 7.8E-47 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS07175 550d52ee541686b2e5137e070bdb433f 368 Gene3D G3DSA:3.30.70.360 178 281 7.1E-25 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain VV93_RS07175 550d52ee541686b2e5137e070bdb433f 368 PANTHER PTHR11014 1 365 8.8E-133 T 23-04-2016 VV93_RS07175 550d52ee541686b2e5137e070bdb433f 368 Pfam PF01546 Peptidase family M20/M25/M40 72 367 1.7E-20 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VV93_RS07175 550d52ee541686b2e5137e070bdb433f 368 Gene3D G3DSA:3.40.630.10 287 365 6.7E-68 T 23-04-2016 VV93_RS07175 550d52ee541686b2e5137e070bdb433f 368 Gene3D G3DSA:3.40.630.10 4 177 6.7E-68 T 23-04-2016 VV93_RS07175 550d52ee541686b2e5137e070bdb433f 368 PANTHER PTHR11014:SF61 1 365 8.8E-133 T 23-04-2016 VV93_RS07175 550d52ee541686b2e5137e070bdb433f 368 SUPERFAMILY SSF55031 177 289 4.45E-22 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain VV93_RS07175 550d52ee541686b2e5137e070bdb433f 368 SUPERFAMILY SSF53187 7 177 1.86E-59 T 23-04-2016 VV93_RS07175 550d52ee541686b2e5137e070bdb433f 368 SUPERFAMILY SSF53187 287 367 1.86E-59 T 23-04-2016 VV93_RS07175 550d52ee541686b2e5137e070bdb433f 368 Pfam PF07687 Peptidase dimerisation domain 182 273 6.8E-15 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain VV93_RS07175 550d52ee541686b2e5137e070bdb433f 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 365 7.6E-159 T 23-04-2016 IPR010162 Peptidase M20B, peptidase T VV93_RS01040 5f3965c3bcb9da71911865986ba1755f 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 32.028 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VV93_RS01040 5f3965c3bcb9da71911865986ba1755f 291 SUPERFAMILY SSF64397 4 231 4.71E-75 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VV93_RS01040 5f3965c3bcb9da71911865986ba1755f 291 PANTHER PTHR30111 1 287 9.4E-77 T 23-04-2016 VV93_RS01040 5f3965c3bcb9da71911865986ba1755f 291 PIRSF PIRSF005261 1 284 3.8E-71 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VV93_RS01040 5f3965c3bcb9da71911865986ba1755f 291 Gene3D G3DSA:1.10.287.480 176 224 2.9E-26 T 23-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain VV93_RS01040 5f3965c3bcb9da71911865986ba1755f 291 Pfam PF01430 Hsp33 protein 6 272 1.7E-79 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VV93_RS01040 5f3965c3bcb9da71911865986ba1755f 291 PANTHER PTHR30111:SF1 1 287 9.4E-77 T 23-04-2016 VV93_RS01040 5f3965c3bcb9da71911865986ba1755f 291 Gene3D G3DSA:3.55.30.10 3 175 8.4E-64 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VV93_RS01040 5f3965c3bcb9da71911865986ba1755f 291 Gene3D G3DSA:3.90.1280.10 225 282 1.6E-21 T 23-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VV93_RS01040 5f3965c3bcb9da71911865986ba1755f 291 SUPERFAMILY SSF118352 224 282 9.42E-18 T 23-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VV93_RS10715 c17fa26cf2079d7a7c2c57329bb078ed 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 10 177 5.5E-72 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 VV93_RS10715 c17fa26cf2079d7a7c2c57329bb078ed 181 PANTHER PTHR11776:SF0 8 181 4.0E-79 T 23-04-2016 VV93_RS10715 c17fa26cf2079d7a7c2c57329bb078ed 181 Gene3D G3DSA:3.40.50.2020 6 179 1.2E-67 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like VV93_RS10715 c17fa26cf2079d7a7c2c57329bb078ed 181 SUPERFAMILY SSF53271 11 178 1.1E-51 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like VV93_RS10715 c17fa26cf2079d7a7c2c57329bb078ed 181 Pfam PF00156 Phosphoribosyl transferase domain 30 145 1.4E-14 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VV93_RS10715 c17fa26cf2079d7a7c2c57329bb078ed 181 PANTHER PTHR11776 8 181 4.0E-79 T 23-04-2016 VV93_RS10715 c17fa26cf2079d7a7c2c57329bb078ed 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 37.638 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 VV93_RS04600 e11e198f641d12b5079b2175ce4db142 363 PANTHER PTHR30381:SF1 1 363 1.4E-216 T 23-04-2016 VV93_RS04600 e11e198f641d12b5079b2175ce4db142 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 39.93 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV93_RS04600 e11e198f641d12b5079b2175ce4db142 363 PANTHER PTHR30381 1 363 1.4E-216 T 23-04-2016 VV93_RS04600 e11e198f641d12b5079b2175ce4db142 363 Pfam PF02119 Flagellar P-ring protein 22 362 1.6E-138 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV93_RS04600 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 6.93E-86 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV93_RS04600 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 6.93E-86 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV93_RS04600 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 6.93E-86 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV93_RS04600 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 6.93E-86 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV93_RS04600 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 6.93E-86 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV93_RS04600 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 6.93E-86 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV93_RS04600 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 6.93E-86 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV93_RS04600 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 6.93E-86 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV93_RS04600 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 6.93E-86 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV93_RS07380 b3418bcb1d179a6c458d38f53ad90b74 159 Pfam PF00583 Acetyltransferase (GNAT) family 63 147 8.1E-15 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS07380 b3418bcb1d179a6c458d38f53ad90b74 159 SUPERFAMILY SSF55729 4 148 7.15E-28 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS07380 b3418bcb1d179a6c458d38f53ad90b74 159 Gene3D G3DSA:3.40.630.30 1 149 1.4E-30 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS07380 b3418bcb1d179a6c458d38f53ad90b74 159 PANTHER PTHR23091 1 148 3.2E-26 T 23-04-2016 VV93_RS02820 58b689758e8ff2c4ed708d54a6286026 397 Pfam PF01098 Cell cycle protein 26 380 5.2E-114 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VV93_RS02820 58b689758e8ff2c4ed708d54a6286026 397 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 23 379 4.2E-129 T 23-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 VV93_RS02820 58b689758e8ff2c4ed708d54a6286026 397 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 21 390 41.606 T 23-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 VV93_RS02820 58b689758e8ff2c4ed708d54a6286026 397 PANTHER PTHR30474:SF2 4 397 2.2E-175 T 23-04-2016 VV93_RS02820 58b689758e8ff2c4ed708d54a6286026 397 PANTHER PTHR30474 4 397 2.2E-175 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VV93_RS02820 58b689758e8ff2c4ed708d54a6286026 397 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 338 362 - T 23-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 VV93_RS02715 72a7c33597efe7f1a598b7a4d87576b3 149 Pfam PF06295 Protein of unknown function (DUF1043) 6 131 1.2E-45 T 23-04-2016 IPR009386 Protein of unknown function DUF1043 VV93_RS02715 72a7c33597efe7f1a598b7a4d87576b3 149 PIRSF PIRSF006318 1 137 3.5E-51 T 23-04-2016 IPR009386 Protein of unknown function DUF1043 VV93_RS02715 72a7c33597efe7f1a598b7a4d87576b3 149 PANTHER PTHR39579 1 140 3.6E-41 T 23-04-2016 VV93_RS09465 07215eb6c86082254e1bf70a143f0133 210 Pfam PF13505 Outer membrane protein beta-barrel domain 14 177 7.4E-7 T 23-04-2016 IPR027385 Outer membrane protein beta-barrel VV93_RS09465 07215eb6c86082254e1bf70a143f0133 210 SUPERFAMILY SSF56925 55 181 2.09E-10 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VV93_RS09465 07215eb6c86082254e1bf70a143f0133 210 Gene3D G3DSA:2.40.160.20 52 178 1.0E-10 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VV93_RS12455 5f59b46b58f90cb692c6002094ca0c90 820 SMART SM00487 2 186 3.1E-16 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV93_RS12455 5f59b46b58f90cb692c6002094ca0c90 820 Pfam PF00271 Helicase conserved C-terminal domain 204 326 6.0E-15 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS12455 5f59b46b58f90cb692c6002094ca0c90 820 SMART SM00847 387 476 1.3E-7 T 23-04-2016 IPR007502 Helicase-associated domain GO:0004386 VV93_RS12455 5f59b46b58f90cb692c6002094ca0c90 820 SUPERFAMILY SSF52540 17 338 5.5E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12455 5f59b46b58f90cb692c6002094ca0c90 820 SMART SM00490 226 327 1.2E-19 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS12455 5f59b46b58f90cb692c6002094ca0c90 820 PIRSF PIRSF005496 1 819 0.0 T 23-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type VV93_RS12455 5f59b46b58f90cb692c6002094ca0c90 820 Pfam PF08482 ATP-dependent helicase C-terminal 673 805 7.3E-53 T 23-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal VV93_RS12455 5f59b46b58f90cb692c6002094ca0c90 820 Pfam PF04408 Helicase associated domain (HA2) 388 446 4.7E-7 T 23-04-2016 IPR007502 Helicase-associated domain GO:0004386 VV93_RS12455 5f59b46b58f90cb692c6002094ca0c90 820 Gene3D G3DSA:3.40.50.300 200 343 9.9E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12455 5f59b46b58f90cb692c6002094ca0c90 820 PANTHER PTHR18934 492 507 6.1E-135 T 23-04-2016 VV93_RS12455 5f59b46b58f90cb692c6002094ca0c90 820 PANTHER PTHR18934 3 430 6.1E-135 T 23-04-2016 VV93_RS12455 5f59b46b58f90cb692c6002094ca0c90 820 Gene3D G3DSA:3.40.50.300 3 160 4.0E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12455 5f59b46b58f90cb692c6002094ca0c90 820 Pfam PF00270 DEAD/DEAH box helicase 14 162 7.7E-9 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV93_RS12455 5f59b46b58f90cb692c6002094ca0c90 820 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 817 0.0 T 23-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type VV93_RS00105 553ea9e9339beca0273c9b94804056df 175 SUPERFAMILY SSF52218 3 172 1.73E-30 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS00105 553ea9e9339beca0273c9b94804056df 175 PANTHER PTHR38030 1 175 1.4E-85 T 23-04-2016 VV93_RS00105 553ea9e9339beca0273c9b94804056df 175 Pfam PF12724 Flavodoxin domain 5 153 1.1E-49 T 23-04-2016 IPR026816 Flavodoxin domain VV93_RS00105 553ea9e9339beca0273c9b94804056df 175 Gene3D G3DSA:3.40.50.360 3 72 2.0E-24 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS00105 553ea9e9339beca0273c9b94804056df 175 Gene3D G3DSA:3.40.50.360 106 175 2.0E-24 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS00105 553ea9e9339beca0273c9b94804056df 175 PANTHER PTHR38030:SF2 1 175 1.4E-85 T 23-04-2016 VV93_RS10270 6bf36a27b9588e82d89c393fb545f57b 232 PANTHER PTHR21367:SF0 7 231 8.1E-65 T 23-04-2016 VV93_RS10270 6bf36a27b9588e82d89c393fb545f57b 232 SUPERFAMILY SSF55729 80 231 1.17E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS10270 6bf36a27b9588e82d89c393fb545f57b 232 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 107 225 5.5E-32 T 23-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 VV93_RS10270 6bf36a27b9588e82d89c393fb545f57b 232 PIRSF PIRSF037208 1 232 9.3E-84 T 23-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic VV93_RS10270 6bf36a27b9588e82d89c393fb545f57b 232 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 232 35.366 T 23-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic VV93_RS10270 6bf36a27b9588e82d89c393fb545f57b 232 PANTHER PTHR21367 7 231 8.1E-65 T 23-04-2016 IPR030700 Arginine-tRNA-protein transferase VV93_RS10270 6bf36a27b9588e82d89c393fb545f57b 232 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 5.3E-19 T 23-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 VV93_RS07470 e16869c3aa71e533b6b68e45d00fb382 249 SUPERFAMILY SSF52540 8 242 1.77E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07470 e16869c3aa71e533b6b68e45d00fb382 249 PANTHER PTHR24220 10 249 1.1E-196 T 23-04-2016 VV93_RS07470 e16869c3aa71e533b6b68e45d00fb382 249 SMART SM00382 33 220 1.3E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS07470 e16869c3aa71e533b6b68e45d00fb382 249 PIRSF PIRSF039085 5 248 1.1E-111 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VV93_RS07470 e16869c3aa71e533b6b68e45d00fb382 249 Gene3D G3DSA:3.40.50.300 7 243 1.3E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07470 e16869c3aa71e533b6b68e45d00fb382 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS07470 e16869c3aa71e533b6b68e45d00fb382 249 Pfam PF00005 ABC transporter 24 172 4.3E-39 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS07470 e16869c3aa71e533b6b68e45d00fb382 249 PANTHER PTHR24220:SF490 10 249 1.1E-196 T 23-04-2016 VV93_RS08170 ea54e0783dd87d11f67baf57927e976f 484 SUPERFAMILY SSF52172 16 197 7.26E-37 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS08170 ea54e0783dd87d11f67baf57927e976f 484 Gene3D G3DSA:3.40.50.300 152 326 1.4E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08170 ea54e0783dd87d11f67baf57927e976f 484 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VV93_RS08170 ea54e0783dd87d11f67baf57927e976f 484 SUPERFAMILY SSF52540 154 384 3.03E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08170 ea54e0783dd87d11f67baf57927e976f 484 SMART SM00382 175 318 6.6E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS08170 ea54e0783dd87d11f67baf57927e976f 484 Pfam PF00072 Response regulator receiver domain 18 128 4.2E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS08170 ea54e0783dd87d11f67baf57927e976f 484 PANTHER PTHR32071 1 476 9.7E-208 T 23-04-2016 VV93_RS08170 ea54e0783dd87d11f67baf57927e976f 484 SUPERFAMILY SSF46689 367 474 9.41E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS08170 ea54e0783dd87d11f67baf57927e976f 484 Gene3D G3DSA:3.40.50.2300 17 138 3.3E-29 T 23-04-2016 VV93_RS08170 ea54e0783dd87d11f67baf57927e976f 484 Gene3D G3DSA:1.10.8.60 327 387 9.7E-18 T 23-04-2016 VV93_RS08170 ea54e0783dd87d11f67baf57927e976f 484 Pfam PF00158 Sigma-54 interaction domain 155 321 6.9E-67 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV93_RS08170 ea54e0783dd87d11f67baf57927e976f 484 Gene3D G3DSA:1.10.10.60 428 476 4.2E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS08170 ea54e0783dd87d11f67baf57927e976f 484 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VV93_RS08170 ea54e0783dd87d11f67baf57927e976f 484 PANTHER PTHR32071:SF18 1 476 9.7E-208 T 23-04-2016 VV93_RS08170 ea54e0783dd87d11f67baf57927e976f 484 SMART SM00448 16 127 1.6E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS08170 ea54e0783dd87d11f67baf57927e976f 484 Pfam PF02954 Bacterial regulatory protein, Fis family 434 475 6.5E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS09325 95ad599af4f2c2bc234f1f3d7e5419f8 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 1.5E-71 T 23-04-2016 IPR021334 Protein of unknown function DUF2947 VV93_RS01755 a66dd4cb821d9762b6cf4b8195d1e793 391 PANTHER PTHR30244:SF16 10 389 4.8E-83 T 23-04-2016 VV93_RS01755 a66dd4cb821d9762b6cf4b8195d1e793 391 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 380 4.8E-96 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VV93_RS01755 a66dd4cb821d9762b6cf4b8195d1e793 391 SUPERFAMILY SSF53383 8 386 5.38E-102 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS01755 a66dd4cb821d9762b6cf4b8195d1e793 391 PANTHER PTHR30244 10 389 4.8E-83 T 23-04-2016 VV93_RS01755 a66dd4cb821d9762b6cf4b8195d1e793 391 PIRSF PIRSF000390 3 389 1.2E-118 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VV93_RS01755 a66dd4cb821d9762b6cf4b8195d1e793 391 Gene3D G3DSA:3.40.640.10 9 255 7.7E-79 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS01755 a66dd4cb821d9762b6cf4b8195d1e793 391 Gene3D G3DSA:3.90.1150.10 257 381 1.9E-14 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS11610 6bc050183bd74d0d95a6f4e70ee9b4b6 77 Pfam PF04400 Protein of unknown function (DUF539) 22 63 1.7E-21 T 23-04-2016 IPR007495 (Na+)-NQR maturation factor NqrM VV93_RS11610 6bc050183bd74d0d95a6f4e70ee9b4b6 77 PANTHER PTHR40691 2 77 1.6E-28 T 23-04-2016 VV93_RS06960 77d32ee0c7862cededfaae8237993792 165 Gene3D G3DSA:3.40.50.2300 6 131 4.3E-18 T 23-04-2016 VV93_RS06960 77d32ee0c7862cededfaae8237993792 165 SUPERFAMILY SSF52172 1 142 8.11E-20 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS06960 77d32ee0c7862cededfaae8237993792 165 PANTHER PTHR26402:SF515 4 129 2.3E-25 T 23-04-2016 VV93_RS06960 77d32ee0c7862cededfaae8237993792 165 SMART SM00448 4 125 3.7E-10 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS06960 77d32ee0c7862cededfaae8237993792 165 Pfam PF00072 Response regulator receiver domain 6 126 1.1E-10 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS06960 77d32ee0c7862cededfaae8237993792 165 PANTHER PTHR26402 4 129 2.3E-25 T 23-04-2016 VV93_RS11820 79c148b9521a5f22a70c63adbeaabaca 366 Pfam PF13673 Acetyltransferase (GNAT) domain 20 126 4.9E-17 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS11820 79c148b9521a5f22a70c63adbeaabaca 366 PANTHER PTHR23091:SF256 1 146 8.4E-50 T 23-04-2016 VV93_RS11820 79c148b9521a5f22a70c63adbeaabaca 366 PANTHER PTHR23091 1 146 8.4E-50 T 23-04-2016 VV93_RS11820 79c148b9521a5f22a70c63adbeaabaca 366 Pfam PF11814 Peptidase_C39 like family 157 359 1.5E-79 T 23-04-2016 IPR021770 Protein of unknown function DUF3335 VV93_RS11820 79c148b9521a5f22a70c63adbeaabaca 366 Gene3D G3DSA:3.40.630.30 1 146 2.7E-31 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS11820 79c148b9521a5f22a70c63adbeaabaca 366 SUPERFAMILY SSF55729 1 146 2.03E-30 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS06385 fc8a0e508311f90f55769df6a3b07fb3 269 Pfam PF08241 Methyltransferase domain 59 152 2.4E-27 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 VV93_RS06385 fc8a0e508311f90f55769df6a3b07fb3 269 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 15 269 32.686 T 23-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 VV93_RS06385 fc8a0e508311f90f55769df6a3b07fb3 269 PANTHER PTHR10108:SF855 1 192 2.3E-46 T 23-04-2016 VV93_RS06385 fc8a0e508311f90f55769df6a3b07fb3 269 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 23 268 2.7E-68 T 23-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 VV93_RS06385 fc8a0e508311f90f55769df6a3b07fb3 269 PANTHER PTHR10108 1 192 2.3E-46 T 23-04-2016 VV93_RS06385 fc8a0e508311f90f55769df6a3b07fb3 269 SUPERFAMILY SSF53335 21 200 3.04E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS06385 fc8a0e508311f90f55769df6a3b07fb3 269 Gene3D G3DSA:3.40.50.150 38 266 3.6E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS08215 79af83eec0e251b2550175af91a3de5a 268 Pfam PF04116 Fatty acid hydroxylase superfamily 93 229 5.6E-25 T 23-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 VV93_RS08215 79af83eec0e251b2550175af91a3de5a 268 PANTHER PTHR11863 89 266 2.4E-33 T 23-04-2016 VV93_RS08215 79af83eec0e251b2550175af91a3de5a 268 PANTHER PTHR11863:SF2 89 266 2.4E-33 T 23-04-2016 VV93_RS13780 0b1b4134655f24e543ef93502f8e2470 123 PANTHER PTHR21011:SF1 1 119 1.1E-41 T 23-04-2016 VV93_RS13780 0b1b4134655f24e543ef93502f8e2470 123 PANTHER PTHR21011 1 119 1.1E-41 T 23-04-2016 VV93_RS13780 0b1b4134655f24e543ef93502f8e2470 123 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.04 T 23-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV93_RS13780 0b1b4134655f24e543ef93502f8e2470 123 Gene3D G3DSA:3.30.70.60 1 103 1.3E-42 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VV93_RS13780 0b1b4134655f24e543ef93502f8e2470 123 Pfam PF01250 Ribosomal protein S6 3 91 1.0E-28 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV93_RS13780 0b1b4134655f24e543ef93502f8e2470 123 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 6.8E-39 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV93_RS13780 0b1b4134655f24e543ef93502f8e2470 123 SUPERFAMILY SSF54995 1 103 1.09E-38 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV93_RS13780 0b1b4134655f24e543ef93502f8e2470 123 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 23-04-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV93_RS15320 f2c363370616b53bf2f7b613ddfa273e 587 SUPERFAMILY SSF52540 13 343 2.99E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15320 f2c363370616b53bf2f7b613ddfa273e 587 Gene3D G3DSA:3.40.50.300 15 158 5.1E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15320 f2c363370616b53bf2f7b613ddfa273e 587 Gene3D G3DSA:3.40.50.300 206 338 5.1E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15320 f2c363370616b53bf2f7b613ddfa273e 587 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 23 317 3.9E-10 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VV93_RS07435 48ae2febe3960c8a1bed2ab0faee9594 2740 SUPERFAMILY SSF53300 2251 2431 4.94E-10 T 23-04-2016 IPR002035 von Willebrand factor, type A VV93_RS07435 48ae2febe3960c8a1bed2ab0faee9594 2740 Gene3D G3DSA:2.150.10.10 2576 2721 1.6E-26 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VV93_RS07435 48ae2febe3960c8a1bed2ab0faee9594 2740 Gene3D G3DSA:2.150.10.10 2382 2383 1.6E-26 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VV93_RS07435 48ae2febe3960c8a1bed2ab0faee9594 2740 Gene3D G3DSA:2.150.10.10 1997 2052 1.6E-26 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VV93_RS07435 48ae2febe3960c8a1bed2ab0faee9594 2740 PRINTS PR00313 NodO calcium binding signature 2591 2602 9.4E-7 T 23-04-2016 VV93_RS07435 48ae2febe3960c8a1bed2ab0faee9594 2740 PRINTS PR00313 NodO calcium binding signature 2612 2620 9.4E-7 T 23-04-2016 VV93_RS07435 48ae2febe3960c8a1bed2ab0faee9594 2740 PRINTS PR00313 NodO calcium binding signature 2603 2611 9.4E-7 T 23-04-2016 VV93_RS07435 48ae2febe3960c8a1bed2ab0faee9594 2740 PRINTS PR00313 NodO calcium binding signature 2630 2639 9.4E-7 T 23-04-2016 VV93_RS07435 48ae2febe3960c8a1bed2ab0faee9594 2740 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 2647 2737 7.1E-7 T 23-04-2016 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VV93_RS07435 48ae2febe3960c8a1bed2ab0faee9594 2740 SUPERFAMILY SSF51120 2568 2718 8.76E-26 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VV93_RS07435 48ae2febe3960c8a1bed2ab0faee9594 2740 Gene3D G3DSA:2.60.40.1560 906 991 1.4E-4 T 23-04-2016 VV93_RS07435 48ae2febe3960c8a1bed2ab0faee9594 2740 Gene3D G3DSA:2.60.40.1560 1015 1100 1.4E-4 T 23-04-2016 VV93_RS07435 48ae2febe3960c8a1bed2ab0faee9594 2740 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2599 2617 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VV93_RS07435 48ae2febe3960c8a1bed2ab0faee9594 2740 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2590 2608 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VV93_RS07435 48ae2febe3960c8a1bed2ab0faee9594 2740 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2617 2635 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VV93_RS07435 48ae2febe3960c8a1bed2ab0faee9594 2740 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2608 2626 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VV93_RS02515 d47473eaccdc12c187c18237b2d6914c 112 Pfam PF06803 Protein of unknown function (DUF1232) 50 85 3.2E-13 T 23-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 VV93_RS02515 d47473eaccdc12c187c18237b2d6914c 112 PIRSF PIRSF031804 1 112 1.2E-41 T 23-04-2016 IPR016983 Uncharacterised conserved protein UCP031804 VV93_RS12895 cf94e5abcf860c05958c00651f5e8c00 86 PANTHER PTHR12469 5 62 1.4E-24 T 23-04-2016 VV93_RS12895 cf94e5abcf860c05958c00651f5e8c00 86 Gene3D G3DSA:1.10.150.250 3 83 1.7E-29 T 23-04-2016 IPR005631 Flavinator of succinate dehydrogenase VV93_RS12895 cf94e5abcf860c05958c00651f5e8c00 86 SUPERFAMILY SSF109910 2 79 6.15E-26 T 23-04-2016 IPR005631 Flavinator of succinate dehydrogenase VV93_RS12895 cf94e5abcf860c05958c00651f5e8c00 86 PANTHER PTHR12469:SF3 5 62 1.4E-24 T 23-04-2016 VV93_RS12895 cf94e5abcf860c05958c00651f5e8c00 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 1.3E-24 T 23-04-2016 IPR005631 Flavinator of succinate dehydrogenase VV93_RS05085 e5fcce4905af849fedfe5dbe51037c3d 154 Gene3D G3DSA:3.10.129.10 5 139 2.0E-21 T 23-04-2016 IPR029069 HotDog domain VV93_RS05085 e5fcce4905af849fedfe5dbe51037c3d 154 PIRSF PIRSF020565 1 154 3.7E-68 T 23-04-2016 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted VV93_RS05085 e5fcce4905af849fedfe5dbe51037c3d 154 SUPERFAMILY SSF54637 4 143 1.23E-28 T 23-04-2016 IPR029069 HotDog domain VV93_RS01850 795111451cfcfe04bee9730d43c306a4 123 SUPERFAMILY SSF50193 2 122 3.66E-51 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VV93_RS01850 795111451cfcfe04bee9730d43c306a4 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 1.6E-58 T 23-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 VV93_RS01850 795111451cfcfe04bee9730d43c306a4 123 Gene3D G3DSA:2.40.150.20 1 123 2.5E-55 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VV93_RS01850 795111451cfcfe04bee9730d43c306a4 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 1.7E-54 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VV93_RS01850 795111451cfcfe04bee9730d43c306a4 123 SMART SM01374 1 123 1.2E-85 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VV93_RS01850 795111451cfcfe04bee9730d43c306a4 123 PANTHER PTHR11761 1 123 7.0E-77 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VV93_RS01850 795111451cfcfe04bee9730d43c306a4 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.914 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VV93_RS01850 795111451cfcfe04bee9730d43c306a4 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 23-04-2016 IPR019972 Ribosomal protein L14P, conserved site VV93_RS08985 cafdedec4e43156b434955115a17b761 293 Pfam PF00482 Type II secretion system (T2SS), protein F 153 281 8.8E-21 T 23-04-2016 IPR018076 Type II secretion system F domain VV93_RS08985 cafdedec4e43156b434955115a17b761 293 PANTHER PTHR35007 1 293 2.1E-46 T 23-04-2016 VV93_RS08985 cafdedec4e43156b434955115a17b761 293 PANTHER PTHR35007:SF2 1 293 2.1E-46 T 23-04-2016 VV93_RS01555 312f01b63e8e6f97833ebf46c4a64ec2 297 PANTHER PTHR22916:SF2 14 223 1.7E-37 T 23-04-2016 VV93_RS01555 312f01b63e8e6f97833ebf46c4a64ec2 297 Gene3D G3DSA:3.90.550.10 14 249 6.8E-35 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS01555 312f01b63e8e6f97833ebf46c4a64ec2 297 PANTHER PTHR22916 14 223 1.7E-37 T 23-04-2016 VV93_RS01555 312f01b63e8e6f97833ebf46c4a64ec2 297 Pfam PF00535 Glycosyl transferase family 2 15 186 8.9E-17 T 23-04-2016 IPR001173 Glycosyltransferase 2-like VV93_RS01555 312f01b63e8e6f97833ebf46c4a64ec2 297 SUPERFAMILY SSF53448 14 233 1.78E-35 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS10070 9cd622e54b8a443a8a2360426b4e16f7 100 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 8 99 1.0E-35 T 23-04-2016 IPR011846 Cyd operon protein YbgE VV93_RS10070 9cd622e54b8a443a8a2360426b4e16f7 100 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 20 96 1.9E-28 T 23-04-2016 IPR011846 Cyd operon protein YbgE VV93_RS05230 8a84db157dc92efbc23811c23ccb95c5 453 PANTHER PTHR33362 1 451 1.5E-241 T 23-04-2016 VV93_RS05230 8a84db157dc92efbc23811c23ccb95c5 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 2.2E-116 T 23-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VV93_RS05230 8a84db157dc92efbc23811c23ccb95c5 453 PANTHER PTHR33362:SF6 1 451 1.5E-241 T 23-04-2016 VV93_RS05230 8a84db157dc92efbc23811c23ccb95c5 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 1.2E-84 T 23-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VV93_RS12520 9eb4305d4854e36bf2bc66b33d2d9c57 205 SUPERFAMILY SSF48498 90 197 2.06E-10 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VV93_RS12520 9eb4305d4854e36bf2bc66b33d2d9c57 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.0E-12 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV93_RS12520 9eb4305d4854e36bf2bc66b33d2d9c57 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.4E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV93_RS12520 9eb4305d4854e36bf2bc66b33d2d9c57 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.4E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV93_RS12520 9eb4305d4854e36bf2bc66b33d2d9c57 205 PANTHER PTHR30055 3 197 3.4E-24 T 23-04-2016 VV93_RS12520 9eb4305d4854e36bf2bc66b33d2d9c57 205 Gene3D G3DSA:1.10.357.10 16 198 2.7E-31 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VV93_RS12520 9eb4305d4854e36bf2bc66b33d2d9c57 205 SUPERFAMILY SSF46689 8 83 8.98E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS07445 923435c38d14f84f4214b26df26079c9 467 SMART SM00283 205 466 4.6E-58 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS07445 923435c38d14f84f4214b26df26079c9 467 PANTHER PTHR32089 118 467 4.2E-115 T 23-04-2016 VV93_RS07445 923435c38d14f84f4214b26df26079c9 467 Gene3D G3DSA:1.10.287.950 220 435 6.7E-54 T 23-04-2016 VV93_RS07445 923435c38d14f84f4214b26df26079c9 467 PANTHER PTHR32089:SF65 118 467 4.2E-115 T 23-04-2016 VV93_RS07445 923435c38d14f84f4214b26df26079c9 467 SUPERFAMILY SSF58104 157 466 1.7E-65 T 23-04-2016 VV93_RS07445 923435c38d14f84f4214b26df26079c9 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 263 462 1.9E-41 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS12555 a0743be8046818597f05adf7d679d6df 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 33 1.8E-10 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS12555 a0743be8046818597f05adf7d679d6df 155 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS12555 a0743be8046818597f05adf7d679d6df 155 Gene3D G3DSA:3.30.700.10 13 149 7.5E-27 T 23-04-2016 VV93_RS12555 a0743be8046818597f05adf7d679d6df 155 SUPERFAMILY SSF54523 13 101 2.04E-20 T 23-04-2016 VV93_RS12555 a0743be8046818597f05adf7d679d6df 155 Pfam PF13633 Prokaryotic N-terminal methylation site 10 36 2.2E-11 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS12555 a0743be8046818597f05adf7d679d6df 155 PANTHER PTHR30093 1 66 5.1E-21 T 23-04-2016 VV93_RS11565 dac668854aaa3a43dc81ca9773c6c435 67 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 67 28.429 T 23-04-2016 IPR009624 Uncharacterised protein family UPF0253 VV93_RS11565 dac668854aaa3a43dc81ca9773c6c435 67 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 2.0E-27 T 23-04-2016 IPR009624 Uncharacterised protein family UPF0253 VV93_RS11565 dac668854aaa3a43dc81ca9773c6c435 67 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 2.2E-36 T 23-04-2016 IPR009624 Uncharacterised protein family UPF0253 VV93_RS14515 81c8d90c63af32f3c4661d09128f7afa 396 Pfam PF12832 MFS_1 like family 13 361 1.1E-40 T 23-04-2016 IPR024989 Major facilitator superfamily associated domain VV93_RS14515 81c8d90c63af32f3c4661d09128f7afa 396 PANTHER PTHR23522 1 396 2.9E-142 T 23-04-2016 VV93_RS14515 81c8d90c63af32f3c4661d09128f7afa 396 SUPERFAMILY SSF103473 8 373 4.32E-35 T 23-04-2016 IPR020846 Major facilitator superfamily domain VV93_RS14515 81c8d90c63af32f3c4661d09128f7afa 396 PIRSF PIRSF004925 2 389 9.8E-104 T 23-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter VV93_RS14515 81c8d90c63af32f3c4661d09128f7afa 396 PANTHER PTHR23522:SF3 1 396 2.9E-142 T 23-04-2016 VV93_RS14515 81c8d90c63af32f3c4661d09128f7afa 396 Gene3D G3DSA:1.20.1250.20 8 177 9.9E-15 T 23-04-2016 VV93_RS14515 81c8d90c63af32f3c4661d09128f7afa 396 Gene3D G3DSA:1.20.1250.20 198 373 2.7E-16 T 23-04-2016 VV93_RS10195 6851d7110dd52664c799cabd947f4b3d 237 PANTHER PTHR26402:SF596 3 237 2.1E-108 T 23-04-2016 VV93_RS10195 6851d7110dd52664c799cabd947f4b3d 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 2.0E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS10195 6851d7110dd52664c799cabd947f4b3d 237 SMART SM00862 158 234 3.4E-19 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS10195 6851d7110dd52664c799cabd947f4b3d 237 Gene3D G3DSA:1.10.10.10 134 235 4.1E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS10195 6851d7110dd52664c799cabd947f4b3d 237 Gene3D G3DSA:3.40.50.2300 2 122 8.9E-36 T 23-04-2016 VV93_RS10195 6851d7110dd52664c799cabd947f4b3d 237 PANTHER PTHR26402 3 237 2.1E-108 T 23-04-2016 VV93_RS10195 6851d7110dd52664c799cabd947f4b3d 237 SUPERFAMILY SSF46894 133 235 6.24E-27 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV93_RS10195 6851d7110dd52664c799cabd947f4b3d 237 SUPERFAMILY SSF52172 2 123 1.99E-36 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS10195 6851d7110dd52664c799cabd947f4b3d 237 Pfam PF00072 Response regulator receiver domain 5 113 3.3E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS10195 6851d7110dd52664c799cabd947f4b3d 237 SMART SM00448 3 113 6.7E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS12175 8b95427bc93ebcd2b294565f37f9ca53 302 PANTHER PTHR23083 48 167 1.2E-22 T 23-04-2016 VV93_RS12175 8b95427bc93ebcd2b294565f37f9ca53 302 PANTHER PTHR23083 237 299 1.2E-22 T 23-04-2016 VV93_RS12175 8b95427bc93ebcd2b294565f37f9ca53 302 SMART SM00028 66 99 0.057 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS12175 8b95427bc93ebcd2b294565f37f9ca53 302 SMART SM00028 100 133 0.0011 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS12175 8b95427bc93ebcd2b294565f37f9ca53 302 SMART SM00028 237 270 20.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS12175 8b95427bc93ebcd2b294565f37f9ca53 302 Pfam PF13176 Tetratricopeptide repeat 240 263 0.012 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS12175 8b95427bc93ebcd2b294565f37f9ca53 302 Gene3D G3DSA:1.25.40.10 48 296 2.0E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS12175 8b95427bc93ebcd2b294565f37f9ca53 302 PIRSF PIRSF004654 1 295 8.4E-88 T 23-04-2016 IPR023605 Lipoprotein NlpI VV93_RS12175 8b95427bc93ebcd2b294565f37f9ca53 302 SUPERFAMILY SSF48452 34 286 6.88E-69 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS08105 fc058b08a756259ed6bccc6c096b453c 202 Gene3D G3DSA:3.30.70.20 121 181 4.3E-21 T 23-04-2016 VV93_RS08105 fc058b08a756259ed6bccc6c096b453c 202 Gene3D G3DSA:3.30.70.20 3 64 4.3E-21 T 23-04-2016 VV93_RS08105 fc058b08a756259ed6bccc6c096b453c 202 SUPERFAMILY SSF54862 1 183 3.24E-48 T 23-04-2016 VV93_RS08105 fc058b08a756259ed6bccc6c096b453c 202 Gene3D G3DSA:3.30.70.20 65 120 5.1E-22 T 23-04-2016 VV93_RS08105 fc058b08a756259ed6bccc6c096b453c 202 PANTHER PTHR11938:SF96 144 182 1.2E-104 T 23-04-2016 VV93_RS08105 fc058b08a756259ed6bccc6c096b453c 202 PANTHER PTHR11938:SF96 1 125 1.2E-104 T 23-04-2016 VV93_RS08105 fc058b08a756259ed6bccc6c096b453c 202 PANTHER PTHR11938 144 182 1.2E-104 T 23-04-2016 VV93_RS08105 fc058b08a756259ed6bccc6c096b453c 202 PANTHER PTHR11938 1 125 1.2E-104 T 23-04-2016 VV93_RS08105 fc058b08a756259ed6bccc6c096b453c 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV93_RS08105 fc058b08a756259ed6bccc6c096b453c 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 5.2E-10 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV93_RS07965 e92f0c5d37c2cd3d4e3f54cbe7491bd0 206 Gene3D G3DSA:1.10.760.10 21 202 2.4E-34 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS07965 e92f0c5d37c2cd3d4e3f54cbe7491bd0 206 PANTHER PTHR10422 30 165 2.5E-87 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VV93_RS07965 e92f0c5d37c2cd3d4e3f54cbe7491bd0 206 SUPERFAMILY SSF46626 21 202 2.81E-28 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS07965 e92f0c5d37c2cd3d4e3f54cbe7491bd0 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 1.3E-81 T 23-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VV93_RS07965 e92f0c5d37c2cd3d4e3f54cbe7491bd0 206 PANTHER PTHR10422:SF23 30 165 2.5E-87 T 23-04-2016 VV93_RS07965 e92f0c5d37c2cd3d4e3f54cbe7491bd0 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 187 1.1E-80 T 23-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VV93_RS03035 331df90a2346f2d990575ba9eaff93df 408 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VV93_RS03035 331df90a2346f2d990575ba9eaff93df 408 Pfam PF00271 Helicase conserved C-terminal domain 234 341 1.8E-31 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS03035 331df90a2346f2d990575ba9eaff93df 408 SMART SM00487 22 224 1.3E-56 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV93_RS03035 331df90a2346f2d990575ba9eaff93df 408 PANTHER PTHR24031:SF334 2 408 2.5E-204 T 23-04-2016 VV93_RS03035 331df90a2346f2d990575ba9eaff93df 408 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 408 50.046 T 23-04-2016 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 VV93_RS03035 331df90a2346f2d990575ba9eaff93df 408 Pfam PF00270 DEAD/DEAH box helicase 27 195 5.9E-46 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV93_RS03035 331df90a2346f2d990575ba9eaff93df 408 PANTHER PTHR24031 2 408 2.5E-204 T 23-04-2016 VV93_RS03035 331df90a2346f2d990575ba9eaff93df 408 Gene3D G3DSA:3.40.50.300 214 372 2.3E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03035 331df90a2346f2d990575ba9eaff93df 408 SUPERFAMILY SSF52540 76 358 2.02E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03035 331df90a2346f2d990575ba9eaff93df 408 SMART SM00490 260 341 2.8E-31 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS03035 331df90a2346f2d990575ba9eaff93df 408 Gene3D G3DSA:3.40.50.300 2 213 2.4E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07070 ae85416b9993b0d70a3c448c496d7864 232 SUPERFAMILY SSF51735 6 227 3.28E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS07070 ae85416b9993b0d70a3c448c496d7864 232 PANTHER PTHR14097:SF7 1 232 1.1E-58 T 23-04-2016 VV93_RS07070 ae85416b9993b0d70a3c448c496d7864 232 Gene3D G3DSA:3.40.50.720 8 230 2.3E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS07070 ae85416b9993b0d70a3c448c496d7864 232 Pfam PF08732 HIM1 80 168 3.3E-10 T 23-04-2016 IPR014843 Protein Him1/Fmp52 VV93_RS07070 ae85416b9993b0d70a3c448c496d7864 232 PANTHER PTHR14097 1 232 1.1E-58 T 23-04-2016 VV93_RS02915 9936ae6cf7f61652b2b3d3799dc0a8b7 231 Gene3D G3DSA:3.40.50.1580 1 230 1.6E-81 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV93_RS02915 9936ae6cf7f61652b2b3d3799dc0a8b7 231 PANTHER PTHR21234:SF16 1 230 5.3E-66 T 23-04-2016 VV93_RS02915 9936ae6cf7f61652b2b3d3799dc0a8b7 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 48.192 T 23-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 VV93_RS02915 9936ae6cf7f61652b2b3d3799dc0a8b7 231 PANTHER PTHR21234 1 230 5.3E-66 T 23-04-2016 IPR018017 Nucleoside phosphorylase VV93_RS02915 9936ae6cf7f61652b2b3d3799dc0a8b7 231 SUPERFAMILY SSF53167 1 230 4.32E-75 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV93_RS02915 9936ae6cf7f61652b2b3d3799dc0a8b7 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 1.7E-101 T 23-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 VV93_RS02915 9936ae6cf7f61652b2b3d3799dc0a8b7 231 Pfam PF01048 Phosphorylase superfamily 2 227 5.7E-50 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV93_RS08885 ee7d4f91c7e31d70787a2cd0b96c0ed2 158 Pfam PF13419 Haloacid dehalogenase-like hydrolase 25 132 5.0E-10 T 23-04-2016 IPR023214 HAD-like domain VV93_RS08885 ee7d4f91c7e31d70787a2cd0b96c0ed2 158 SUPERFAMILY SSF56784 1 141 2.21E-23 T 23-04-2016 IPR023214 HAD-like domain VV93_RS08885 ee7d4f91c7e31d70787a2cd0b96c0ed2 158 Gene3D G3DSA:3.40.50.1000 19 156 1.2E-24 T 23-04-2016 IPR023214 HAD-like domain VV93_RS07960 83aee72b43a5d678d768efaa3901b90a 477 Gene3D G3DSA:1.20.210.10 9 469 2.1E-70 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VV93_RS07960 83aee72b43a5d678d768efaa3901b90a 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 11 468 1.1E-229 T 23-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VV93_RS07960 83aee72b43a5d678d768efaa3901b90a 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 447 9.6E-116 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VV93_RS07960 83aee72b43a5d678d768efaa3901b90a 477 PANTHER PTHR10422:SF21 5 468 0.0 T 23-04-2016 VV93_RS07960 83aee72b43a5d678d768efaa3901b90a 477 SUPERFAMILY SSF81442 11 469 1.09E-121 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VV93_RS07960 83aee72b43a5d678d768efaa3901b90a 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 207 262 - T 23-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VV93_RS07960 83aee72b43a5d678d768efaa3901b90a 477 PANTHER PTHR10422 5 468 0.0 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VV93_RS09770 ce6e87830eb0e3407bb952e27643e203 176 Pfam PF13521 AAA domain 4 167 1.2E-38 T 23-04-2016 VV93_RS09770 ce6e87830eb0e3407bb952e27643e203 176 Gene3D G3DSA:3.40.50.300 4 172 2.3E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09770 ce6e87830eb0e3407bb952e27643e203 176 SUPERFAMILY SSF52540 4 171 8.07E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04050 f5592bf2e6351dcf0461a937f3c8d7d1 368 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VV93_RS04050 f5592bf2e6351dcf0461a937f3c8d7d1 368 Pfam PF01872 RibD C-terminal domain 152 357 5.7E-47 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VV93_RS04050 f5592bf2e6351dcf0461a937f3c8d7d1 368 Gene3D G3DSA:3.40.140.10 7 133 2.1E-33 T 23-04-2016 VV93_RS04050 f5592bf2e6351dcf0461a937f3c8d7d1 368 PIRSF PIRSF006769 3 366 1.6E-119 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 VV93_RS04050 f5592bf2e6351dcf0461a937f3c8d7d1 368 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 360 2.2E-55 T 23-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 VV93_RS04050 f5592bf2e6351dcf0461a937f3c8d7d1 368 Gene3D G3DSA:3.40.430.10 134 361 6.1E-63 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain VV93_RS04050 f5592bf2e6351dcf0461a937f3c8d7d1 368 PANTHER PTHR11079 7 237 6.5E-68 T 23-04-2016 VV93_RS04050 f5592bf2e6351dcf0461a937f3c8d7d1 368 SUPERFAMILY SSF53927 8 150 2.3E-47 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VV93_RS04050 f5592bf2e6351dcf0461a937f3c8d7d1 368 PANTHER PTHR11079:SF10 7 237 6.5E-68 T 23-04-2016 VV93_RS04050 f5592bf2e6351dcf0461a937f3c8d7d1 368 SUPERFAMILY SSF53597 149 361 1.19E-52 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain VV93_RS04050 f5592bf2e6351dcf0461a937f3c8d7d1 368 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 104 8.1E-19 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 VV93_RS04050 f5592bf2e6351dcf0461a937f3c8d7d1 368 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 358 1.6E-127 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 VV93_RS03560 2475df50e040e9b102f05c3379f2836b 127 PANTHER PTHR10093:SF3 1 127 1.0E-100 T 23-04-2016 VV93_RS03560 2475df50e040e9b102f05c3379f2836b 127 SUPERFAMILY SSF82649 1 125 9.94E-48 T 23-04-2016 VV93_RS03560 2475df50e040e9b102f05c3379f2836b 127 PANTHER PTHR10093 1 127 1.0E-100 T 23-04-2016 VV93_RS03560 2475df50e040e9b102f05c3379f2836b 127 Pfam PF01592 NifU-like N terminal domain 2 125 2.0E-56 T 23-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 VV93_RS03560 2475df50e040e9b102f05c3379f2836b 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.3E-69 T 23-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 VV93_RS03560 2475df50e040e9b102f05c3379f2836b 127 Gene3D G3DSA:3.90.1010.10 2 126 5.7E-56 T 23-04-2016 VV93_RS11195 f7b7084d1d9182277497d824994469d7 355 PANTHER PTHR13696 10 198 3.6E-27 T 23-04-2016 VV93_RS11195 f7b7084d1d9182277497d824994469d7 355 PANTHER PTHR13696:SF1 10 198 3.6E-27 T 23-04-2016 VV93_RS11195 f7b7084d1d9182277497d824994469d7 355 Gene3D G3DSA:3.40.50.300 11 232 4.8E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11195 f7b7084d1d9182277497d824994469d7 355 SUPERFAMILY SSF52540 11 236 1.91E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11195 f7b7084d1d9182277497d824994469d7 355 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 13 197 2.7E-25 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VV93_RS09890 4527ca9ebca6028d1d4d27d1c9f3eb35 302 PANTHER PTHR22981 1 300 3.1E-123 T 23-04-2016 VV93_RS09890 4527ca9ebca6028d1d4d27d1c9f3eb35 302 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 288 3.4E-32 T 23-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VV93_RS09890 4527ca9ebca6028d1d4d27d1c9f3eb35 302 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 9 22 - T 23-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 VV93_RS09890 4527ca9ebca6028d1d4d27d1c9f3eb35 302 PANTHER PTHR22981:SF27 1 300 3.1E-123 T 23-04-2016 VV93_RS09890 4527ca9ebca6028d1d4d27d1c9f3eb35 302 SUPERFAMILY SSF48179 168 291 5.78E-36 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VV93_RS09890 4527ca9ebca6028d1d4d27d1c9f3eb35 302 Gene3D G3DSA:3.40.50.720 4 166 3.6E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS09890 4527ca9ebca6028d1d4d27d1c9f3eb35 302 Gene3D G3DSA:1.10.1040.10 168 290 7.2E-43 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VV93_RS09890 4527ca9ebca6028d1d4d27d1c9f3eb35 302 PIRSF PIRSF000103 1 293 4.9E-57 T 23-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 VV93_RS09890 4527ca9ebca6028d1d4d27d1c9f3eb35 302 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 165 3.3E-38 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 VV93_RS09890 4527ca9ebca6028d1d4d27d1c9f3eb35 302 SUPERFAMILY SSF51735 6 167 1.2E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS06160 884cff06517efce79d1ea1619dac2a5d 338 Gene3D G3DSA:3.30.160.60 74 111 5.1E-15 T 23-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 VV93_RS06160 884cff06517efce79d1ea1619dac2a5d 338 Gene3D G3DSA:3.30.160.60 303 337 3.3E-19 T 23-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 VV93_RS06160 884cff06517efce79d1ea1619dac2a5d 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 6 337 5.8E-99 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like VV93_RS06160 884cff06517efce79d1ea1619dac2a5d 338 Pfam PF02618 YceG-like family 43 329 2.4E-81 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like VV93_RS06160 884cff06517efce79d1ea1619dac2a5d 338 PANTHER PTHR30518 1 338 3.4E-86 T 23-04-2016 VV93_RS06160 884cff06517efce79d1ea1619dac2a5d 338 PANTHER PTHR30518:SF2 1 338 3.4E-86 T 23-04-2016 VV93_RS12575 94ed2996efc9d53e5d5807a6cde29b16 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 188 1.3E-68 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 VV93_RS12575 94ed2996efc9d53e5d5807a6cde29b16 202 PANTHER PTHR10695 1 195 7.5E-73 T 23-04-2016 VV93_RS12575 94ed2996efc9d53e5d5807a6cde29b16 202 Gene3D G3DSA:3.40.50.300 2 198 4.5E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12575 94ed2996efc9d53e5d5807a6cde29b16 202 Pfam PF01121 Dephospho-CoA kinase 3 181 4.6E-77 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 VV93_RS12575 94ed2996efc9d53e5d5807a6cde29b16 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 27.877 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 VV93_RS12575 94ed2996efc9d53e5d5807a6cde29b16 202 SUPERFAMILY SSF52540 1 193 3.33E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07165 3d82793c2aae3a1648a3b7e68ffbc71e 313 SUPERFAMILY SSF52317 18 297 1.71E-103 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS07165 3d82793c2aae3a1648a3b7e68ffbc71e 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 4.0E-140 T 23-04-2016 VV93_RS07165 3d82793c2aae3a1648a3b7e68ffbc71e 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 1.3E-162 T 23-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VV93_RS07165 3d82793c2aae3a1648a3b7e68ffbc71e 313 PIRSF PIRSF000450 1 309 1.8E-148 T 23-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VV93_RS07165 3d82793c2aae3a1648a3b7e68ffbc71e 313 PANTHER PTHR20919:SF0 2 313 1.1E-159 T 23-04-2016 VV93_RS07165 3d82793c2aae3a1648a3b7e68ffbc71e 313 PANTHER PTHR20919 2 313 1.1E-159 T 23-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VV93_RS07165 3d82793c2aae3a1648a3b7e68ffbc71e 313 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 54.253 T 23-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VV93_RS07165 3d82793c2aae3a1648a3b7e68ffbc71e 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.7E-136 T 23-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VV93_RS07165 3d82793c2aae3a1648a3b7e68ffbc71e 313 Gene3D G3DSA:3.40.50.880 34 301 4.8E-123 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS00975 aefac896d0239228e78c16e5a1200122 843 SMART SM00304 370 423 1.5E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS00975 aefac896d0239228e78c16e5a1200122 843 SUPERFAMILY SSF158472 371 420 3.14E-8 T 23-04-2016 VV93_RS00975 aefac896d0239228e78c16e5a1200122 843 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 426 575 1.4E-21 T 23-04-2016 IPR000160 GGDEF domain VV93_RS00975 aefac896d0239228e78c16e5a1200122 843 Gene3D G3DSA:3.30.70.270 431 588 4.7E-32 T 23-04-2016 VV93_RS00975 aefac896d0239228e78c16e5a1200122 843 Pfam PF00990 Diguanylate cyclase, GGDEF domain 431 575 2.1E-27 T 23-04-2016 IPR000160 GGDEF domain VV93_RS00975 aefac896d0239228e78c16e5a1200122 843 Pfam PF02743 Cache domain 41 315 2.2E-19 T 23-04-2016 IPR033479 Double Cache domain 1 VV93_RS00975 aefac896d0239228e78c16e5a1200122 843 Gene3D G3DSA:3.20.20.450 597 840 8.8E-89 T 23-04-2016 IPR001633 EAL domain VV93_RS00975 aefac896d0239228e78c16e5a1200122 843 Gene3D G3DSA:3.30.450.20 88 135 5.8E-19 T 23-04-2016 VV93_RS00975 aefac896d0239228e78c16e5a1200122 843 Gene3D G3DSA:3.30.450.20 167 221 5.8E-19 T 23-04-2016 VV93_RS00975 aefac896d0239228e78c16e5a1200122 843 PANTHER PTHR33121 593 840 3.0E-70 T 23-04-2016 VV93_RS00975 aefac896d0239228e78c16e5a1200122 843 Pfam PF00672 HAMP domain 351 419 1.3E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS00975 aefac896d0239228e78c16e5a1200122 843 SUPERFAMILY SSF55073 434 575 4.32E-29 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS00975 aefac896d0239228e78c16e5a1200122 843 SUPERFAMILY SSF141868 600 841 1.83E-80 T 23-04-2016 IPR001633 EAL domain VV93_RS00975 aefac896d0239228e78c16e5a1200122 843 Pfam PF00563 EAL domain 599 834 7.1E-72 T 23-04-2016 IPR001633 EAL domain VV93_RS00975 aefac896d0239228e78c16e5a1200122 843 SMART SM00052 592 839 4.9E-98 T 23-04-2016 IPR001633 EAL domain VV93_RS00975 aefac896d0239228e78c16e5a1200122 843 PANTHER PTHR33121:SF1 593 840 3.0E-70 T 23-04-2016 VV93_RS00975 aefac896d0239228e78c16e5a1200122 843 SMART SM00267 418 582 1.6E-26 T 23-04-2016 IPR000160 GGDEF domain VV93_RS07215 04ce4863da37190110d5578d43d0be61 263 SUPERFAMILY SSF53850 37 244 1.28E-13 T 23-04-2016 VV93_RS07215 04ce4863da37190110d5578d43d0be61 263 Gene3D G3DSA:3.40.190.10 49 101 1.6E-6 T 23-04-2016 VV93_RS07215 04ce4863da37190110d5578d43d0be61 263 Gene3D G3DSA:3.40.190.10 205 248 1.6E-6 T 23-04-2016 VV93_RS07835 65ae3735bf00694c8408f1075e30abec 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 1.2E-10 T 23-04-2016 VV93_RS07835 65ae3735bf00694c8408f1075e30abec 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 1.2E-10 T 23-04-2016 VV93_RS07835 65ae3735bf00694c8408f1075e30abec 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 1.2E-10 T 23-04-2016 VV93_RS07835 65ae3735bf00694c8408f1075e30abec 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 1.2E-10 T 23-04-2016 VV93_RS07835 65ae3735bf00694c8408f1075e30abec 547 PANTHER PTHR10046 1 511 1.6E-136 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 VV93_RS07835 65ae3735bf00694c8408f1075e30abec 547 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 506 2.7E-10 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 VV93_RS07835 65ae3735bf00694c8408f1075e30abec 547 PANTHER PTHR10046:SF49 1 511 1.6E-136 T 23-04-2016 VV93_RS07835 65ae3735bf00694c8408f1075e30abec 547 SUPERFAMILY SSF54211 314 506 1.02E-33 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS07835 65ae3735bf00694c8408f1075e30abec 547 Gene3D G3DSA:3.30.230.10 306 506 6.1E-32 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV93_RS07835 65ae3735bf00694c8408f1075e30abec 547 Pfam PF13654 AAA domain 106 288 2.6E-20 T 23-04-2016 VV93_RS01235 39eead49014114aec400b09a294d6cce 609 Gene3D G3DSA:3.40.190.10 161 331 7.8E-13 T 23-04-2016 VV93_RS01235 39eead49014114aec400b09a294d6cce 609 PIRSF PIRSF002741 1 564 1.5E-63 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VV93_RS01235 39eead49014114aec400b09a294d6cce 609 PANTHER PTHR30290 5 536 9.0E-57 T 23-04-2016 VV93_RS01235 39eead49014114aec400b09a294d6cce 609 Gene3D G3DSA:3.10.105.10 332 538 1.2E-39 T 23-04-2016 VV93_RS01235 39eead49014114aec400b09a294d6cce 609 Gene3D G3DSA:3.90.76.10 81 160 1.2E-19 T 23-04-2016 VV93_RS01235 39eead49014114aec400b09a294d6cce 609 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 484 1.6E-57 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain VV93_RS01235 39eead49014114aec400b09a294d6cce 609 SUPERFAMILY SSF53850 41 557 3.26E-91 T 23-04-2016 VV93_RS01605 f5411c4ee2573ed44b75a8f6df7fd17d 257 Gene3D G3DSA:3.40.50.720 5 256 4.8E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01605 f5411c4ee2573ed44b75a8f6df7fd17d 257 PANTHER PTHR24321 3 257 2.7E-15 T 23-04-2016 VV93_RS01605 f5411c4ee2573ed44b75a8f6df7fd17d 257 PANTHER PTHR24321:SF6 3 257 2.7E-15 T 23-04-2016 VV93_RS01605 f5411c4ee2573ed44b75a8f6df7fd17d 257 SUPERFAMILY SSF51735 6 257 1.02E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01605 f5411c4ee2573ed44b75a8f6df7fd17d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 7.8E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS01605 f5411c4ee2573ed44b75a8f6df7fd17d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 7.8E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS01605 f5411c4ee2573ed44b75a8f6df7fd17d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.8E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS01605 f5411c4ee2573ed44b75a8f6df7fd17d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 7.8E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS01605 f5411c4ee2573ed44b75a8f6df7fd17d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 7.8E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS01605 f5411c4ee2573ed44b75a8f6df7fd17d 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 256 2.0E-30 T 23-04-2016 VV93_RS11410 1aa3ae29fd11cf290d33deb1c5ff17e3 207 PANTHER PTHR10954 16 207 7.2E-84 T 23-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 VV93_RS11410 1aa3ae29fd11cf290d33deb1c5ff17e3 207 Gene3D G3DSA:3.30.420.10 19 161 1.8E-49 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS11410 1aa3ae29fd11cf290d33deb1c5ff17e3 207 Pfam PF01351 Ribonuclease HII 22 198 8.7E-40 T 23-04-2016 IPR024567 Ribonuclease HII/HIII domain VV93_RS11410 1aa3ae29fd11cf290d33deb1c5ff17e3 207 Hamap MF_00052_B Ribonuclease HII [rnhB]. 20 199 37.927 T 23-04-2016 IPR022898 Ribonuclease HII GO:0004523 VV93_RS11410 1aa3ae29fd11cf290d33deb1c5ff17e3 207 SUPERFAMILY SSF53098 14 204 1.97E-71 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS11860 9166c01fccae8539af6b497339fed26c 356 SUPERFAMILY SSF51445 7 315 1.36E-50 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily VV93_RS11860 9166c01fccae8539af6b497339fed26c 356 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 40 292 2.0E-10 T 23-04-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 VV93_RS11860 9166c01fccae8539af6b497339fed26c 356 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 163 172 - T 23-04-2016 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 VV93_RS11860 9166c01fccae8539af6b497339fed26c 356 Gene3D G3DSA:3.20.20.80 15 332 1.6E-44 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VV93_RS09040 e48f47bb091f4ed1f51f7a35fc992ba4 158 Pfam PF13592 Winged helix-turn helix 99 156 1.5E-15 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS09040 e48f47bb091f4ed1f51f7a35fc992ba4 158 Gene3D G3DSA:1.10.10.60 20 89 2.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS09040 e48f47bb091f4ed1f51f7a35fc992ba4 158 SUPERFAMILY SSF46689 16 132 1.52E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS09040 e48f47bb091f4ed1f51f7a35fc992ba4 158 Pfam PF13551 Winged helix-turn helix 24 83 6.9E-14 T 23-04-2016 VV93_RS13515 688a54551877628a84a7828390c8488f 165 PRINTS PR00813 Bacterial general secretion pathway protein G signature 43 61 1.0E-6 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VV93_RS13515 688a54551877628a84a7828390c8488f 165 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 1.0E-6 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VV93_RS13515 688a54551877628a84a7828390c8488f 165 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 3 26 4.6E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS13515 688a54551877628a84a7828390c8488f 165 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 1.2E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS13515 688a54551877628a84a7828390c8488f 165 SUPERFAMILY SSF54523 9 147 2.12E-11 T 23-04-2016 VV93_RS02065 1802912bed60b58f05ab43f4128315c8 338 PIRSF PIRSF000904 1 337 7.5E-125 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 VV93_RS02065 1802912bed60b58f05ab43f4128315c8 338 Gene3D G3DSA:3.40.190.80 199 331 4.1E-59 T 23-04-2016 VV93_RS02065 1802912bed60b58f05ab43f4128315c8 338 Gene3D G3DSA:3.30.540.10 5 198 3.2E-80 T 23-04-2016 VV93_RS02065 1802912bed60b58f05ab43f4128315c8 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.0E-77 T 23-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VV93_RS02065 1802912bed60b58f05ab43f4128315c8 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 42.886 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 VV93_RS02065 1802912bed60b58f05ab43f4128315c8 338 PIRSF PIRSF500210 1 336 1.7E-127 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VV93_RS02065 1802912bed60b58f05ab43f4128315c8 338 SUPERFAMILY SSF56655 3 331 4.65E-114 T 23-04-2016 VV93_RS02065 1802912bed60b58f05ab43f4128315c8 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 2.6E-76 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VV93_RS02065 1802912bed60b58f05ab43f4128315c8 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 2.6E-76 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VV93_RS02065 1802912bed60b58f05ab43f4128315c8 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 2.6E-76 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VV93_RS02065 1802912bed60b58f05ab43f4128315c8 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 2.6E-76 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VV93_RS02065 1802912bed60b58f05ab43f4128315c8 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 2.6E-76 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VV93_RS02065 1802912bed60b58f05ab43f4128315c8 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 2.6E-76 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VV93_RS02065 1802912bed60b58f05ab43f4128315c8 338 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 23-04-2016 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474 VV93_RS02065 1802912bed60b58f05ab43f4128315c8 338 PANTHER PTHR11556 4 338 4.6E-188 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 VV93_RS00385 cfad2a70c58588c6640cbf54f9d0a0cd 175 PANTHER PTHR11431 10 167 1.0E-43 T 23-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 VV93_RS00385 cfad2a70c58588c6640cbf54f9d0a0cd 175 SUPERFAMILY SSF47240 1 160 3.57E-58 T 23-04-2016 IPR009078 Ferritin-like superfamily VV93_RS00385 cfad2a70c58588c6640cbf54f9d0a0cd 175 Pfam PF00210 Ferritin-like domain 8 143 1.2E-38 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VV93_RS00385 cfad2a70c58588c6640cbf54f9d0a0cd 175 Gene3D G3DSA:1.20.1260.10 1 163 5.5E-62 T 23-04-2016 IPR012347 Ferritin-related VV93_RS14110 0e330497708bf3edf7068a380d1c9f28 263 PANTHER PTHR31136:SF2 6 262 6.2E-127 T 23-04-2016 VV93_RS14110 0e330497708bf3edf7068a380d1c9f28 263 PANTHER PTHR31136 6 262 6.2E-127 T 23-04-2016 VV93_RS14110 0e330497708bf3edf7068a380d1c9f28 263 Pfam PF07063 Domain of unknown function (DUF1338) 30 261 4.2E-46 T 23-04-2016 IPR009770 Domain of unknown function DUF1338 VV93_RS14110 0e330497708bf3edf7068a380d1c9f28 263 SMART SM01150 3 262 1.4E-109 T 23-04-2016 IPR009770 Domain of unknown function DUF1338 VV93_RS06580 2b1a9cdb6362192bd1e127ec55b597ca 264 PANTHER PTHR30028:SF0 1 264 8.0E-61 T 23-04-2016 IPR005226 UPF0014 family VV93_RS06580 2b1a9cdb6362192bd1e127ec55b597ca 264 Pfam PF03649 Uncharacterised protein family (UPF0014) 10 249 1.6E-71 T 23-04-2016 IPR005226 UPF0014 family VV93_RS06580 2b1a9cdb6362192bd1e127ec55b597ca 264 PANTHER PTHR30028 1 264 8.0E-61 T 23-04-2016 VV93_RS03985 cef0561e54380ef9d4a3e9b72a424805 1297 Gene3D G3DSA:3.40.50.880 1042 1265 9.6E-14 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS03985 cef0561e54380ef9d4a3e9b72a424805 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 967 1.1E-13 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VV93_RS03985 cef0561e54380ef9d4a3e9b72a424805 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 2.8E-28 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VV93_RS03985 cef0561e54380ef9d4a3e9b72a424805 1297 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1041 1294 3.8E-105 T 23-04-2016 VV93_RS03985 cef0561e54380ef9d4a3e9b72a424805 1297 SUPERFAMILY SSF109736 155 220 7.59E-22 T 23-04-2016 VV93_RS03985 cef0561e54380ef9d4a3e9b72a424805 1297 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1297 21.344 T 23-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VV93_RS03985 cef0561e54380ef9d4a3e9b72a424805 1297 Gene3D G3DSA:3.30.1330.10 211 422 1.7E-39 T 23-04-2016 IPR016188 PurM-like, N-terminal domain VV93_RS03985 cef0561e54380ef9d4a3e9b72a424805 1297 Gene3D G3DSA:3.30.1330.10 645 810 1.0E-15 T 23-04-2016 IPR016188 PurM-like, N-terminal domain VV93_RS03985 cef0561e54380ef9d4a3e9b72a424805 1297 SUPERFAMILY SSF82697 1 151 4.29E-51 T 23-04-2016 VV93_RS03985 cef0561e54380ef9d4a3e9b72a424805 1297 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1295 0.0 T 23-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VV93_RS03985 cef0561e54380ef9d4a3e9b72a424805 1297 SUPERFAMILY SSF52317 1037 1295 9.35E-98 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS03985 cef0561e54380ef9d4a3e9b72a424805 1297 SUPERFAMILY SSF56042 432 615 7.03E-54 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VV93_RS03985 cef0561e54380ef9d4a3e9b72a424805 1297 SUPERFAMILY SSF55326 221 428 1.15E-65 T 23-04-2016 VV93_RS03985 cef0561e54380ef9d4a3e9b72a424805 1297 PANTHER PTHR10099:SF5 1 1297 0.0 T 23-04-2016 VV93_RS03985 cef0561e54380ef9d4a3e9b72a424805 1297 PANTHER PTHR10099 1 1297 0.0 T 23-04-2016 VV93_RS03985 cef0561e54380ef9d4a3e9b72a424805 1297 SMART SM01211 1041 1296 2.9E-156 T 23-04-2016 VV93_RS03985 cef0561e54380ef9d4a3e9b72a424805 1297 SUPERFAMILY SSF56042 825 1035 2.84E-54 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VV93_RS03985 cef0561e54380ef9d4a3e9b72a424805 1297 SUPERFAMILY SSF55326 620 816 7.33E-69 T 23-04-2016 VV93_RS05105 08d5af87e8aa713c13abd772b86bfc2f 218 Gene3D G3DSA:2.50.20.10 39 205 2.2E-15 T 23-04-2016 VV93_RS05105 08d5af87e8aa713c13abd772b86bfc2f 218 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 52 206 5.1E-12 T 23-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VV93_RS05105 08d5af87e8aa713c13abd772b86bfc2f 218 SUPERFAMILY SSF89392 39 205 1.41E-23 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX VV93_RS02810 1c4a2cb50a3ef21756069db0ab3d9fd9 360 Pfam PF00953 Glycosyl transferase family 4 99 283 2.6E-37 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS02810 1c4a2cb50a3ef21756069db0ab3d9fd9 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 6.3E-6 T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS02810 1c4a2cb50a3ef21756069db0ab3d9fd9 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 5.3E-157 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS02810 1c4a2cb50a3ef21756069db0ab3d9fd9 360 PANTHER PTHR22926 2 360 9.8E-191 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS02810 1c4a2cb50a3ef21756069db0ab3d9fd9 360 PANTHER PTHR22926:SF5 2 360 9.8E-191 T 23-04-2016 VV93_RS02810 1c4a2cb50a3ef21756069db0ab3d9fd9 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.357 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS02810 1c4a2cb50a3ef21756069db0ab3d9fd9 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS02810 1c4a2cb50a3ef21756069db0ab3d9fd9 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VV93_RS11155 611596ffa1a643f439cabcd38bb8aad9 110 Pfam PF00578 AhpC/TSA family 7 109 2.0E-32 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 VV93_RS11155 611596ffa1a643f439cabcd38bb8aad9 110 Gene3D G3DSA:3.40.30.10 2 109 5.3E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS11155 611596ffa1a643f439cabcd38bb8aad9 110 PANTHER PTHR10681 1 108 9.5E-43 T 23-04-2016 VV93_RS11155 611596ffa1a643f439cabcd38bb8aad9 110 SUPERFAMILY SSF52833 1 109 3.48E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS06545 44c56a939776b45dc26356e9109c6b66 212 Gene3D G3DSA:3.40.50.620 14 143 1.6E-46 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS06545 44c56a939776b45dc26356e9109c6b66 212 Pfam PF02698 DUF218 domain 33 147 4.7E-23 T 23-04-2016 IPR003848 Domain of unknown function DUF218 VV93_RS06545 44c56a939776b45dc26356e9109c6b66 212 PANTHER PTHR30336 3 205 3.1E-67 T 23-04-2016 VV93_RS06545 44c56a939776b45dc26356e9109c6b66 212 PANTHER PTHR30336:SF5 3 205 3.1E-67 T 23-04-2016 VV93_RS02490 c486d8cf78d3692d299640426749958d 361 Gene3D G3DSA:3.40.50.300 3 337 1.3E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02490 c486d8cf78d3692d299640426749958d 361 PANTHER PTHR32182:SF13 244 358 3.3E-22 T 23-04-2016 VV93_RS02490 c486d8cf78d3692d299640426749958d 361 SUPERFAMILY SSF52540 188 347 1.92E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02490 c486d8cf78d3692d299640426749958d 361 SUPERFAMILY SSF52540 1 120 1.92E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02490 c486d8cf78d3692d299640426749958d 361 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 167 309 1.1E-18 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VV93_RS02490 c486d8cf78d3692d299640426749958d 361 PANTHER PTHR32182 244 358 3.3E-22 T 23-04-2016 VV93_RS15065 a3bc016c6f6f0e1985345c9aa7eef33e 365 Gene3D G3DSA:3.10.350.10 37 86 5.4E-7 T 23-04-2016 IPR018392 LysM domain VV93_RS15065 a3bc016c6f6f0e1985345c9aa7eef33e 365 Pfam PF01476 LysM domain 40 85 5.6E-11 T 23-04-2016 IPR018392 LysM domain VV93_RS15065 a3bc016c6f6f0e1985345c9aa7eef33e 365 SMART SM00257 39 87 2.0E-4 T 23-04-2016 IPR018392 LysM domain VV93_RS15065 a3bc016c6f6f0e1985345c9aa7eef33e 365 PANTHER PTHR34700 26 354 1.8E-71 T 23-04-2016 VV93_RS15065 a3bc016c6f6f0e1985345c9aa7eef33e 365 PANTHER PTHR34700:SF2 26 354 1.8E-71 T 23-04-2016 VV93_RS15065 a3bc016c6f6f0e1985345c9aa7eef33e 365 SUPERFAMILY SSF54106 38 86 1.1E-6 T 23-04-2016 IPR018392 LysM domain VV93_RS14465 5299f93ab04266e167eb59844f0bdf59 157 Pfam PF00588 SpoU rRNA Methylase family 3 144 5.9E-35 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VV93_RS14465 5299f93ab04266e167eb59844f0bdf59 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 154 32.573 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VV93_RS14465 5299f93ab04266e167eb59844f0bdf59 157 PANTHER PTHR12029:SF31 1 156 5.3E-75 T 23-04-2016 VV93_RS14465 5299f93ab04266e167eb59844f0bdf59 157 SUPERFAMILY SSF75217 2 155 7.85E-44 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases VV93_RS14465 5299f93ab04266e167eb59844f0bdf59 157 PIRSF PIRSF029256 1 157 2.4E-66 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VV93_RS14465 5299f93ab04266e167eb59844f0bdf59 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 156 6.1E-58 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VV93_RS14465 5299f93ab04266e167eb59844f0bdf59 157 Gene3D G3DSA:3.40.1280.10 1 156 2.0E-65 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VV93_RS14465 5299f93ab04266e167eb59844f0bdf59 157 PANTHER PTHR12029 1 156 5.3E-75 T 23-04-2016 VV93_RS02900 053ebd112ec625c5b2c97dd18d2d33ff 206 PANTHER PTHR30506:SF3 1 206 6.4E-96 T 23-04-2016 VV93_RS02900 053ebd112ec625c5b2c97dd18d2d33ff 206 Pfam PF03458 UPF0126 domain 8 81 5.5E-23 T 23-04-2016 IPR005115 Uncharacterised domain UPF0126 VV93_RS02900 053ebd112ec625c5b2c97dd18d2d33ff 206 Pfam PF03458 UPF0126 domain 95 163 8.7E-20 T 23-04-2016 IPR005115 Uncharacterised domain UPF0126 VV93_RS02900 053ebd112ec625c5b2c97dd18d2d33ff 206 PANTHER PTHR30506 1 206 6.4E-96 T 23-04-2016 VV93_RS12375 5c106f8fd635217d6a92143f73fe5c8f 296 PANTHER PTHR12862 4 277 4.8E-90 T 23-04-2016 VV93_RS12375 5c106f8fd635217d6a92143f73fe5c8f 296 Gene3D G3DSA:3.30.420.40 1 77 2.6E-4 T 23-04-2016 VV93_RS12375 5c106f8fd635217d6a92143f73fe5c8f 296 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 3.9E-45 T 23-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type VV93_RS12375 5c106f8fd635217d6a92143f73fe5c8f 296 SUPERFAMILY SSF53067 1 111 3.98E-24 T 23-04-2016 VV93_RS12375 5c106f8fd635217d6a92143f73fe5c8f 296 SUPERFAMILY SSF53067 114 283 1.5E-42 T 23-04-2016 VV93_RS12375 5c106f8fd635217d6a92143f73fe5c8f 296 PANTHER PTHR12862:SF5 4 277 4.8E-90 T 23-04-2016 VV93_RS23065 500a3d9d4b8d0c2b5aaf78ce1d7e20a0 377 SUPERFAMILY SSF53756 1 337 1.79E-48 T 23-04-2016 VV93_RS23065 500a3d9d4b8d0c2b5aaf78ce1d7e20a0 377 PANTHER PTHR12526 146 337 3.2E-37 T 23-04-2016 VV93_RS23065 500a3d9d4b8d0c2b5aaf78ce1d7e20a0 377 Pfam PF00534 Glycosyl transferases group 1 198 335 4.7E-27 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 VV93_RS23065 500a3d9d4b8d0c2b5aaf78ce1d7e20a0 377 PANTHER PTHR12526:SF141 146 337 3.2E-37 T 23-04-2016 VV93_RS23065 500a3d9d4b8d0c2b5aaf78ce1d7e20a0 377 Gene3D G3DSA:3.40.50.2000 181 311 1.1E-15 T 23-04-2016 VV93_RS02790 7bf55ab4026da7e8234f16fed8017fdc 105 PANTHER PTHR37479:SF1 1 105 6.6E-35 T 23-04-2016 VV93_RS02790 7bf55ab4026da7e8234f16fed8017fdc 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 20 103 1.6E-27 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 VV93_RS02790 7bf55ab4026da7e8234f16fed8017fdc 105 Pfam PF04999 Cell division protein FtsL 8 103 1.1E-36 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 VV93_RS02790 7bf55ab4026da7e8234f16fed8017fdc 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 16.075 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 VV93_RS02790 7bf55ab4026da7e8234f16fed8017fdc 105 PANTHER PTHR37479 1 105 6.6E-35 T 23-04-2016 VV93_RS13770 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13770 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13770 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13770 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13770 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.4E-25 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13770 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13770 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13770 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 23-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13770 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 8 74 5.2E-33 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13770 172c44b6db02fe4c0a08641ec7d7996e 75 PANTHER PTHR13479 2 74 2.1E-35 T 23-04-2016 VV93_RS13770 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13770 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01830 5bebf174d373222397797f0f6845fcb8 233 SUPERFAMILY SSF54821 108 206 7.72E-41 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 VV93_RS01830 5bebf174d373222397797f0f6845fcb8 233 SMART SM00322 60 125 7.4E-8 T 23-04-2016 IPR004087 K Homology domain GO:0003676 VV93_RS01830 5bebf174d373222397797f0f6845fcb8 233 Gene3D G3DSA:3.30.300.20 18 107 1.1E-32 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta VV93_RS01830 5bebf174d373222397797f0f6845fcb8 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.991 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VV93_RS01830 5bebf174d373222397797f0f6845fcb8 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 23-04-2016 IPR018280 Ribosomal protein S3, conserved site VV93_RS01830 5bebf174d373222397797f0f6845fcb8 233 Gene3D G3DSA:3.30.1140.32 108 207 1.2E-47 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 VV93_RS01830 5bebf174d373222397797f0f6845fcb8 233 Pfam PF07650 KH domain 38 111 3.6E-19 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 VV93_RS01830 5bebf174d373222397797f0f6845fcb8 233 PANTHER PTHR11760:SF19 2 232 1.8E-148 T 23-04-2016 VV93_RS01830 5bebf174d373222397797f0f6845fcb8 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 5.7E-42 T 23-04-2016 VV93_RS01830 5bebf174d373222397797f0f6845fcb8 233 SUPERFAMILY SSF54814 2 106 1.62E-36 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VV93_RS01830 5bebf174d373222397797f0f6845fcb8 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.3E-98 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VV93_RS01830 5bebf174d373222397797f0f6845fcb8 233 PANTHER PTHR11760 2 232 1.8E-148 T 23-04-2016 VV93_RS13390 a1412ac347d5e4255ee79ccbab4df486 136 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 1.4E-21 T 23-04-2016 IPR018638 Domain of unknown function DUF2061, membrane VV93_RS13390 a1412ac347d5e4255ee79ccbab4df486 136 Pfam PF09834 Predicted membrane protein (DUF2061) 66 115 5.2E-20 T 23-04-2016 IPR018638 Domain of unknown function DUF2061, membrane VV93_RS14310 e2b3f25c8318388c602546599d0109e8 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 8 465 6.9E-48 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VV93_RS14310 e2b3f25c8318388c602546599d0109e8 471 PANTHER PTHR10283 1 74 8.0E-143 T 23-04-2016 VV93_RS14310 e2b3f25c8318388c602546599d0109e8 471 PANTHER PTHR10283 94 464 8.0E-143 T 23-04-2016 VV93_RS14310 e2b3f25c8318388c602546599d0109e8 471 PANTHER PTHR10283:SF92 1 74 8.0E-143 T 23-04-2016 VV93_RS14310 e2b3f25c8318388c602546599d0109e8 471 PANTHER PTHR10283:SF92 94 464 8.0E-143 T 23-04-2016 VV93_RS14310 e2b3f25c8318388c602546599d0109e8 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 466 7.0E-81 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VV93_RS06210 16ee0057af6f8a2764d582ffddfc4240 405 SUPERFAMILY SSF46785 10 76 3.45E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS06210 16ee0057af6f8a2764d582ffddfc4240 405 Gene3D G3DSA:3.30.420.40 222 376 3.4E-53 T 23-04-2016 VV93_RS06210 16ee0057af6f8a2764d582ffddfc4240 405 Gene3D G3DSA:3.30.420.40 85 221 8.5E-35 T 23-04-2016 VV93_RS06210 16ee0057af6f8a2764d582ffddfc4240 405 Gene3D G3DSA:1.10.10.10 11 80 3.1E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS06210 16ee0057af6f8a2764d582ffddfc4240 405 Pfam PF00480 ROK family 88 390 2.0E-70 T 23-04-2016 IPR000600 ROK family VV93_RS06210 16ee0057af6f8a2764d582ffddfc4240 405 PANTHER PTHR18964:SF128 65 402 9.4E-179 T 23-04-2016 VV93_RS06210 16ee0057af6f8a2764d582ffddfc4240 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 23-04-2016 IPR000600 ROK family VV93_RS06210 16ee0057af6f8a2764d582ffddfc4240 405 SUPERFAMILY SSF53067 86 393 7.69E-55 T 23-04-2016 VV93_RS06210 16ee0057af6f8a2764d582ffddfc4240 405 PANTHER PTHR18964 65 402 9.4E-179 T 23-04-2016 VV93_RS04745 28bbec59836f842c154f8dc0af3e1c64 172 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 172 8.0E-87 T 23-04-2016 VV93_RS06695 50821762ade311dbcb5e59367a032954 361 Pfam PF13437 HlyD family secretion protein 155 253 5.7E-8 T 23-04-2016 VV93_RS06695 50821762ade311dbcb5e59367a032954 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 353 7.2E-70 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VV93_RS06695 50821762ade311dbcb5e59367a032954 361 Gene3D G3DSA:2.40.50.100 61 91 1.6E-18 T 23-04-2016 VV93_RS06695 50821762ade311dbcb5e59367a032954 361 Gene3D G3DSA:2.40.50.100 152 183 1.6E-18 T 23-04-2016 VV93_RS06695 50821762ade311dbcb5e59367a032954 361 SUPERFAMILY SSF111369 50 264 6.67E-29 T 23-04-2016 VV93_RS06695 50821762ade311dbcb5e59367a032954 361 Pfam PF13533 Biotin-lipoyl like 62 104 3.7E-13 T 23-04-2016 VV93_RS06695 50821762ade311dbcb5e59367a032954 361 PANTHER PTHR30469 12 361 2.4E-116 T 23-04-2016 VV93_RS06695 50821762ade311dbcb5e59367a032954 361 PANTHER PTHR30469:SF10 12 361 2.4E-116 T 23-04-2016 VV93_RS13785 d5f15a3613b3dd2b6bdb8c79ef792b32 222 PIRSF PIRSF001461 1 222 1.4E-106 T 23-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VV93_RS13785 d5f15a3613b3dd2b6bdb8c79ef792b32 222 Gene3D G3DSA:3.20.20.70 2 221 2.0E-97 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS13785 d5f15a3613b3dd2b6bdb8c79ef792b32 222 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 3.7E-100 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VV93_RS13785 d5f15a3613b3dd2b6bdb8c79ef792b32 222 PANTHER PTHR11749:SF7 2 222 5.9E-140 T 23-04-2016 VV93_RS13785 d5f15a3613b3dd2b6bdb8c79ef792b32 222 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VV93_RS13785 d5f15a3613b3dd2b6bdb8c79ef792b32 222 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VV93_RS13785 d5f15a3613b3dd2b6bdb8c79ef792b32 222 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 4.2E-92 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VV93_RS13785 d5f15a3613b3dd2b6bdb8c79ef792b32 222 SUPERFAMILY SSF51366 4 218 3.77E-78 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VV93_RS13785 d5f15a3613b3dd2b6bdb8c79ef792b32 222 PANTHER PTHR11749 2 222 5.9E-140 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VV93_RS10030 6d79dcb940b7764a06e4b7f0d81f4223 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 4.1E-101 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VV93_RS10030 6d79dcb940b7764a06e4b7f0d81f4223 353 SUPERFAMILY SSF142754 29 341 5.23E-106 T 23-04-2016 VV93_RS10030 6d79dcb940b7764a06e4b7f0d81f4223 353 PANTHER PTHR30573 1 352 3.0E-165 T 23-04-2016 VV93_RS10030 6d79dcb940b7764a06e4b7f0d81f4223 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 2.2E-114 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VV93_RS10030 6d79dcb940b7764a06e4b7f0d81f4223 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.784 T 23-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VV93_RS02795 bfefd2a3ea113a50cdd61ff317cda27b 576 Gene3D G3DSA:3.40.710.10 245 568 5.7E-91 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS02795 bfefd2a3ea113a50cdd61ff317cda27b 576 Pfam PF03717 Penicillin-binding Protein dimerisation domain 71 224 1.4E-19 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VV93_RS02795 bfefd2a3ea113a50cdd61ff317cda27b 576 PANTHER PTHR30627:SF1 11 576 5.4E-223 T 23-04-2016 VV93_RS02795 bfefd2a3ea113a50cdd61ff317cda27b 576 SUPERFAMILY SSF56519 65 237 4.58E-46 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VV93_RS02795 bfefd2a3ea113a50cdd61ff317cda27b 576 Pfam PF00905 Penicillin binding protein transpeptidase domain 263 559 5.4E-79 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VV93_RS02795 bfefd2a3ea113a50cdd61ff317cda27b 576 Gene3D G3DSA:3.90.1310.10 145 244 6.3E-33 T 23-04-2016 VV93_RS02795 bfefd2a3ea113a50cdd61ff317cda27b 576 SUPERFAMILY SSF56601 239 570 2.65E-93 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS02795 bfefd2a3ea113a50cdd61ff317cda27b 576 PANTHER PTHR30627 11 576 5.4E-223 T 23-04-2016 VV93_RS02205 c7a2999613e2ac02b8f75ef34d62e2b4 84 PANTHER PTHR12735 1 84 2.6E-36 T 23-04-2016 VV93_RS02205 c7a2999613e2ac02b8f75ef34d62e2b4 84 PIRSF PIRSF003113 2 83 8.6E-23 T 23-04-2016 IPR002634 BolA protein VV93_RS02205 c7a2999613e2ac02b8f75ef34d62e2b4 84 PANTHER PTHR12735:SF24 1 84 2.6E-36 T 23-04-2016 VV93_RS02205 c7a2999613e2ac02b8f75ef34d62e2b4 84 Gene3D G3DSA:3.30.300.90 3 80 7.5E-28 T 23-04-2016 IPR002634 BolA protein VV93_RS02205 c7a2999613e2ac02b8f75ef34d62e2b4 84 Pfam PF01722 BolA-like protein 20 74 3.5E-15 T 23-04-2016 IPR002634 BolA protein VV93_RS02205 c7a2999613e2ac02b8f75ef34d62e2b4 84 SUPERFAMILY SSF82657 4 82 7.85E-29 T 23-04-2016 IPR002634 BolA protein VV93_RS03860 aca715e8489e12eadf615407f291e825 117 PANTHER PTHR37483 5 110 2.7E-43 T 23-04-2016 VV93_RS03860 aca715e8489e12eadf615407f291e825 117 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 25.694 T 23-04-2016 IPR005346 RnfH protein VV93_RS03860 aca715e8489e12eadf615407f291e825 117 PANTHER PTHR37483:SF1 5 110 2.7E-43 T 23-04-2016 VV93_RS03860 aca715e8489e12eadf615407f291e825 117 Pfam PF03658 RnfH family Ubiquitin 8 90 3.8E-34 T 23-04-2016 IPR005346 RnfH protein VV93_RS03860 aca715e8489e12eadf615407f291e825 117 SUPERFAMILY SSF54285 6 82 2.05E-26 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VV93_RS03860 aca715e8489e12eadf615407f291e825 117 Gene3D G3DSA:3.10.20.280 2 92 8.5E-38 T 23-04-2016 IPR005346 RnfH protein VV93_RS13105 0fc62c55139b9efeae00918bf75a3b08 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.501 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VV93_RS13105 0fc62c55139b9efeae00918bf75a3b08 90 PIRSF PIRSF029827 1 90 1.6E-43 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VV93_RS13105 0fc62c55139b9efeae00918bf75a3b08 90 PANTHER PTHR36965 2 90 1.8E-55 T 23-04-2016 VV93_RS13105 0fc62c55139b9efeae00918bf75a3b08 90 PANTHER PTHR36965:SF1 2 90 1.8E-55 T 23-04-2016 VV93_RS13105 0fc62c55139b9efeae00918bf75a3b08 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 6.0E-40 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VV93_RS13105 0fc62c55139b9efeae00918bf75a3b08 90 Gene3D G3DSA:1.10.3880.10 1 89 1.9E-44 T 23-04-2016 VV93_RS13105 0fc62c55139b9efeae00918bf75a3b08 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.4E-42 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VV93_RS13105 0fc62c55139b9efeae00918bf75a3b08 90 SUPERFAMILY SSF111148 1 89 7.98E-41 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VV93_RS11490 ac2ff5edbe18916f936e18afce9a5734 873 SMART SM00471 447 594 1.8E-10 T 23-04-2016 IPR003607 HD/PDEase domain VV93_RS11490 ac2ff5edbe18916f936e18afce9a5734 873 PANTHER PTHR13734 108 688 5.3E-150 T 23-04-2016 VV93_RS11490 ac2ff5edbe18916f936e18afce9a5734 873 Gene3D G3DSA:1.10.3210.10 421 610 5.6E-28 T 23-04-2016 IPR006674 HD domain VV93_RS11490 ac2ff5edbe18916f936e18afce9a5734 873 SUPERFAMILY SSF55021 796 854 4.16E-7 T 23-04-2016 VV93_RS11490 ac2ff5edbe18916f936e18afce9a5734 873 SUPERFAMILY SSF81301 33 172 2.73E-19 T 23-04-2016 VV93_RS11490 ac2ff5edbe18916f936e18afce9a5734 873 PIRSF PIRSF006288 6 873 0.0 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VV93_RS11490 ac2ff5edbe18916f936e18afce9a5734 873 Pfam PF01966 HD domain 452 584 6.9E-14 T 23-04-2016 IPR006674 HD domain VV93_RS11490 ac2ff5edbe18916f936e18afce9a5734 873 SUPERFAMILY SSF81593 187 310 5.1E-9 T 23-04-2016 VV93_RS11490 ac2ff5edbe18916f936e18afce9a5734 873 Pfam PF01909 Nucleotidyltransferase domain 69 124 6.4E-7 T 23-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VV93_RS11490 ac2ff5edbe18916f936e18afce9a5734 873 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 29 868 0.0 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VV93_RS11490 ac2ff5edbe18916f936e18afce9a5734 873 Gene3D G3DSA:3.30.460.10 70 163 3.3E-10 T 23-04-2016 VV93_RS11490 ac2ff5edbe18916f936e18afce9a5734 873 Gene3D G3DSA:3.30.70.260 796 856 1.9E-6 T 23-04-2016 VV93_RS11490 ac2ff5edbe18916f936e18afce9a5734 873 PANTHER PTHR13734:SF45 108 688 5.3E-150 T 23-04-2016 VV93_RS11490 ac2ff5edbe18916f936e18afce9a5734 873 SUPERFAMILY SSF109604 416 593 5.34E-15 T 23-04-2016 VV93_RS11490 ac2ff5edbe18916f936e18afce9a5734 873 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 873 335.657 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VV93_RS11490 ac2ff5edbe18916f936e18afce9a5734 873 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 2.8E-35 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VV93_RS11490 ac2ff5edbe18916f936e18afce9a5734 873 SUPERFAMILY SSF55021 689 762 8.33E-8 T 23-04-2016 VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 SMART SM00388 131 196 2.2E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 PANTHER PTHR24423 7 268 9.6E-162 T 23-04-2016 VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 PANTHER PTHR24423 284 350 9.6E-162 T 23-04-2016 VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 SUPERFAMILY SSF55785 10 103 5.9E-9 T 23-04-2016 IPR000014 PAS domain VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 SUPERFAMILY SSF55874 198 349 4.32E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 331 1.5E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 349 1.5E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 298 1.5E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 122 7.8E-6 T 23-04-2016 IPR000014 PAS domain VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 PANTHER PTHR24423:SF488 7 268 9.6E-162 T 23-04-2016 VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 PANTHER PTHR24423:SF488 284 350 9.6E-162 T 23-04-2016 VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 349 1.6E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 SMART SM00091 6 74 8.9E-8 T 23-04-2016 IPR000014 PAS domain VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 Gene3D G3DSA:3.30.450.20 6 112 2.4E-27 T 23-04-2016 VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 SUPERFAMILY SSF47384 127 192 1.67E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 Gene3D G3DSA:1.10.287.130 126 188 1.7E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 SMART SM00387 235 350 7.2E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 Gene3D G3DSA:3.30.565.10 195 350 6.4E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 Pfam PF00512 His Kinase A (phospho-acceptor) domain 135 191 2.2E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS00985 413aeea58c00fec64071f83d780b5e05 350 Pfam PF00989 PAS fold 10 111 2.8E-12 T 23-04-2016 IPR013767 PAS fold GO:0006355 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 Gene3D G3DSA:2.20.25.90 60 115 1.0E-17 T 23-04-2016 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 SMART SM00926 61 115 7.1E-16 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 PANTHER PTHR11615 406 599 0.0 T 23-04-2016 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 PANTHER PTHR11615 10 382 0.0 T 23-04-2016 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 PANTHER PTHR11615 731 951 0.0 T 23-04-2016 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 Gene3D G3DSA:2.40.40.20 768 779 4.0E-58 T 23-04-2016 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 Gene3D G3DSA:2.40.40.20 812 951 4.0E-58 T 23-04-2016 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 Gene3D G3DSA:2.40.40.20 641 674 4.0E-58 T 23-04-2016 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 Gene3D G3DSA:3.40.50.740 371 394 3.0E-37 T 23-04-2016 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 Gene3D G3DSA:3.40.50.740 446 616 3.0E-37 T 23-04-2016 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 8.5E-22 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 PANTHER PTHR11615:SF140 406 599 0.0 T 23-04-2016 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 PANTHER PTHR11615:SF140 10 382 0.0 T 23-04-2016 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 PANTHER PTHR11615:SF140 731 951 0.0 T 23-04-2016 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 SUPERFAMILY SSF53706 60 646 3.27E-201 T 23-04-2016 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 SUPERFAMILY SSF50692 752 782 1.62E-40 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 SUPERFAMILY SSF50692 813 951 1.62E-40 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 Pfam PF00384 Molybdopterin oxidoreductase 118 568 2.9E-55 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 Gene3D G3DSA:3.40.228.10 191 370 1.7E-61 T 23-04-2016 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 23-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 VV93_RS08110 c6430173b93317f0f72d4786f90124fc 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.4E-11 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VV93_RS08755 38b5a4447b501c9ae678cab894be5e0d 221 Pfam PF13488 Glycine zipper 38 85 9.4E-12 T 23-04-2016 VV93_RS08755 38b5a4447b501c9ae678cab894be5e0d 221 Pfam PF00691 OmpA family 117 211 2.1E-17 T 23-04-2016 IPR006665 OmpA-like domain VV93_RS08755 38b5a4447b501c9ae678cab894be5e0d 221 Gene3D G3DSA:3.30.1330.60 106 219 2.6E-33 T 23-04-2016 IPR006665 OmpA-like domain VV93_RS08755 38b5a4447b501c9ae678cab894be5e0d 221 SUPERFAMILY SSF103088 105 220 1.44E-33 T 23-04-2016 IPR006665 OmpA-like domain VV93_RS08755 38b5a4447b501c9ae678cab894be5e0d 221 PANTHER PTHR30128 24 221 3.4E-55 T 23-04-2016 VV93_RS08755 38b5a4447b501c9ae678cab894be5e0d 221 PRINTS PR01021 OMPA domain signature 162 178 3.9E-9 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV93_RS08755 38b5a4447b501c9ae678cab894be5e0d 221 PRINTS PR01021 OMPA domain signature 117 139 3.9E-9 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV93_RS08755 38b5a4447b501c9ae678cab894be5e0d 221 PRINTS PR01021 OMPA domain signature 147 162 3.9E-9 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV93_RS03545 fd9842cf51db04c61394bf00e3efc61b 242 SUPERFAMILY SSF75217 5 175 2.88E-37 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases VV93_RS03545 fd9842cf51db04c61394bf00e3efc61b 242 Gene3D G3DSA:3.40.1280.10 3 158 4.5E-33 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VV93_RS03545 fd9842cf51db04c61394bf00e3efc61b 242 PIRSF PIRSF004808 1 242 9.6E-74 T 23-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VV93_RS03545 fd9842cf51db04c61394bf00e3efc61b 242 Pfam PF00588 SpoU rRNA Methylase family 5 153 7.4E-34 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VV93_RS03545 fd9842cf51db04c61394bf00e3efc61b 242 PANTHER PTHR12029 7 180 3.5E-39 T 23-04-2016 VV93_RS03545 fd9842cf51db04c61394bf00e3efc61b 242 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 239 7.7E-83 T 23-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 Gene3D G3DSA:1.10.3850.10 796 1010 4.5E-63 T 23-04-2016 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 Gene3D G3DSA:3.30.70.1430 556 653 9.9E-16 T 23-04-2016 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 Gene3D G3DSA:3.30.70.1430 40 140 8.4E-29 T 23-04-2016 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 SUPERFAMILY SSF82693 139 181 3.4E-19 T 23-04-2016 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 SUPERFAMILY SSF82693 268 324 3.4E-19 T 23-04-2016 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 SUPERFAMILY SSF82714 183 266 4.45E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 SUPERFAMILY SSF82866 290 489 4.45E-46 T 23-04-2016 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 Gene3D G3DSA:1.20.1640.10 286 499 2.9E-57 T 23-04-2016 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 PANTHER PTHR32063:SF29 1 1013 0.0 T 23-04-2016 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 SUPERFAMILY SSF82866 794 1011 2.49E-49 T 23-04-2016 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.3E-71 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.3E-71 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.3E-71 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.3E-71 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.3E-71 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.3E-71 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.3E-71 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 3.3E-71 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 3.3E-71 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 PANTHER PTHR32063 1 1013 0.0 T 23-04-2016 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 Gene3D G3DSA:3.30.2090.10 183 268 7.6E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 Gene3D G3DSA:3.30.2090.10 703 788 1.7E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 SUPERFAMILY SSF82693 40 134 6.28E-25 T 23-04-2016 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 SUPERFAMILY SSF82714 704 788 7.06E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 2.2E-277 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS05395 c9efd399e0a4fa5d4537c90390eaf242 1037 SUPERFAMILY SSF82693 554 657 5.75E-17 T 23-04-2016 VV93_RS03010 54823b5d5c96c26e3782e287e4800203 226 PANTHER PTHR11264 1 224 1.4E-164 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 VV93_RS03010 54823b5d5c96c26e3782e287e4800203 226 Pfam PF03167 Uracil DNA glycosylase superfamily 53 207 2.6E-24 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like VV93_RS03010 54823b5d5c96c26e3782e287e4800203 226 SUPERFAMILY SSF52141 5 222 2.05E-96 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like VV93_RS03010 54823b5d5c96c26e3782e287e4800203 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 6.9E-88 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 VV93_RS03010 54823b5d5c96c26e3782e287e4800203 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.209 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 VV93_RS03010 54823b5d5c96c26e3782e287e4800203 226 SMART SM00986 49 210 6.9E-41 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like VV93_RS03010 54823b5d5c96c26e3782e287e4800203 226 Gene3D G3DSA:3.40.470.10 6 222 1.3E-102 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like VV93_RS03010 54823b5d5c96c26e3782e287e4800203 226 PANTHER PTHR11264:SF10 1 224 1.4E-164 T 23-04-2016 VV93_RS03010 54823b5d5c96c26e3782e287e4800203 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 23-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 VV93_RS03010 54823b5d5c96c26e3782e287e4800203 226 SMART SM00987 49 210 6.9E-41 T 23-04-2016 VV93_RS02355 c7a44bc0c717284059722af49c81cbf3 319 Gene3D G3DSA:3.40.190.10 189 281 1.2E-14 T 23-04-2016 VV93_RS02355 c7a44bc0c717284059722af49c81cbf3 319 Gene3D G3DSA:3.40.190.10 287 315 5.7E-24 T 23-04-2016 VV93_RS02355 c7a44bc0c717284059722af49c81cbf3 319 Gene3D G3DSA:3.40.190.10 106 188 5.7E-24 T 23-04-2016 VV93_RS02355 c7a44bc0c717284059722af49c81cbf3 319 PANTHER PTHR30118 14 319 2.6E-150 T 23-04-2016 VV93_RS02355 c7a44bc0c717284059722af49c81cbf3 319 SUPERFAMILY SSF53850 106 309 6.52E-38 T 23-04-2016 VV93_RS02355 c7a44bc0c717284059722af49c81cbf3 319 Gene3D G3DSA:1.10.10.10 17 101 3.7E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS02355 c7a44bc0c717284059722af49c81cbf3 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS02355 c7a44bc0c717284059722af49c81cbf3 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS02355 c7a44bc0c717284059722af49c81cbf3 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS02355 c7a44bc0c717284059722af49c81cbf3 319 PANTHER PTHR30118:SF6 14 319 2.6E-150 T 23-04-2016 VV93_RS02355 c7a44bc0c717284059722af49c81cbf3 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.2E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS02355 c7a44bc0c717284059722af49c81cbf3 319 Pfam PF03466 LysR substrate binding domain 121 308 4.2E-20 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS02355 c7a44bc0c717284059722af49c81cbf3 319 SUPERFAMILY SSF46785 22 99 2.72E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS03950 8ae81471f6997183c4d8f2ee66ebf32d 138 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS03950 8ae81471f6997183c4d8f2ee66ebf32d 138 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 3.3E-4 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS03950 8ae81471f6997183c4d8f2ee66ebf32d 138 Pfam PF13633 Prokaryotic N-terminal methylation site 5 30 4.3E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS10660 e2e5c8746811fa0372fe4925592edd72 231 ProSitePatterns PS00221 MIP family signature. 60 68 - T 23-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 VV93_RS10660 e2e5c8746811fa0372fe4925592edd72 231 Pfam PF00230 Major intrinsic protein 2 222 1.8E-47 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VV93_RS10660 e2e5c8746811fa0372fe4925592edd72 231 Gene3D G3DSA:1.20.1080.10 1 227 6.2E-68 T 23-04-2016 IPR023271 Aquaporin-like VV93_RS10660 e2e5c8746811fa0372fe4925592edd72 231 PRINTS PR00783 Major intrinsic protein family signature 136 154 3.8E-52 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VV93_RS10660 e2e5c8746811fa0372fe4925592edd72 231 PRINTS PR00783 Major intrinsic protein family signature 166 188 3.8E-52 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VV93_RS10660 e2e5c8746811fa0372fe4925592edd72 231 PRINTS PR00783 Major intrinsic protein family signature 205 225 3.8E-52 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VV93_RS10660 e2e5c8746811fa0372fe4925592edd72 231 PRINTS PR00783 Major intrinsic protein family signature 79 98 3.8E-52 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VV93_RS10660 e2e5c8746811fa0372fe4925592edd72 231 PRINTS PR00783 Major intrinsic protein family signature 2 21 3.8E-52 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VV93_RS10660 e2e5c8746811fa0372fe4925592edd72 231 PRINTS PR00783 Major intrinsic protein family signature 42 66 3.8E-52 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VV93_RS10660 e2e5c8746811fa0372fe4925592edd72 231 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 35.093 T 23-04-2016 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 VV93_RS10660 e2e5c8746811fa0372fe4925592edd72 231 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 4.4E-60 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VV93_RS10660 e2e5c8746811fa0372fe4925592edd72 231 SUPERFAMILY SSF81338 2 227 2.49E-68 T 23-04-2016 IPR023271 Aquaporin-like VV93_RS10660 e2e5c8746811fa0372fe4925592edd72 231 PANTHER PTHR19139:SF103 1 225 4.1E-77 T 23-04-2016 VV93_RS10660 e2e5c8746811fa0372fe4925592edd72 231 PANTHER PTHR19139 1 225 4.1E-77 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VV93_RS13925 e826ea3188589de8dbce7de00d3cf48b 185 Pfam PF05036 Sporulation related domain 111 180 4.5E-14 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 VV93_RS13925 e826ea3188589de8dbce7de00d3cf48b 185 Gene3D G3DSA:3.30.70.1070 105 182 8.5E-26 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 VV93_RS13925 e826ea3188589de8dbce7de00d3cf48b 185 SUPERFAMILY SSF110997 110 181 3.53E-16 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 VV93_RS14425 f4e65b0978431a86bc740c098f333da6 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.088 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV93_RS14425 f4e65b0978431a86bc740c098f333da6 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 3.3E-31 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV93_RS14425 f4e65b0978431a86bc740c098f333da6 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.8E-27 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV93_RS14425 f4e65b0978431a86bc740c098f333da6 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.8E-27 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV93_RS14425 f4e65b0978431a86bc740c098f333da6 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.8E-27 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV93_RS14425 f4e65b0978431a86bc740c098f333da6 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.8E-27 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV93_RS14425 f4e65b0978431a86bc740c098f333da6 96 Gene3D G3DSA:2.30.33.40 1 95 4.9E-33 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV93_RS14425 f4e65b0978431a86bc740c098f333da6 96 PANTHER PTHR10772 1 96 8.0E-41 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV93_RS14425 f4e65b0978431a86bc740c098f333da6 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 23-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 VV93_RS14425 f4e65b0978431a86bc740c098f333da6 96 SMART SM00883 2 95 8.8E-51 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV93_RS14425 f4e65b0978431a86bc740c098f333da6 96 SUPERFAMILY SSF50129 1 95 1.17E-31 T 23-04-2016 IPR011032 GroES-like VV93_RS07350 81d12a5861edfde9abef7a589205d246 380 Gene3D G3DSA:1.10.580.10 21 242 6.6E-75 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 VV93_RS07350 81d12a5861edfde9abef7a589205d246 380 PIRSF PIRSF001369 10 380 5.7E-116 T 23-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 VV93_RS07350 81d12a5861edfde9abef7a589205d246 380 PANTHER PTHR11739 15 380 6.3E-152 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS07350 81d12a5861edfde9abef7a589205d246 380 SUPERFAMILY SSF48256 14 380 1.16E-124 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS07350 81d12a5861edfde9abef7a589205d246 380 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 23-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 VV93_RS07350 81d12a5861edfde9abef7a589205d246 380 Gene3D G3DSA:1.10.230.10 243 327 1.1E-29 T 23-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain VV93_RS07350 81d12a5861edfde9abef7a589205d246 380 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 1.8E-113 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS07350 81d12a5861edfde9abef7a589205d246 380 PANTHER PTHR11739:SF4 15 380 6.3E-152 T 23-04-2016 VV93_RS07350 81d12a5861edfde9abef7a589205d246 380 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 380 2.2E-162 T 23-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 VV93_RS07350 81d12a5861edfde9abef7a589205d246 380 PRINTS PR00143 Citrate synthase signature 256 276 9.1E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS07350 81d12a5861edfde9abef7a589205d246 380 PRINTS PR00143 Citrate synthase signature 203 231 9.1E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS07350 81d12a5861edfde9abef7a589205d246 380 PRINTS PR00143 Citrate synthase signature 130 143 9.1E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS07350 81d12a5861edfde9abef7a589205d246 380 PRINTS PR00143 Citrate synthase signature 181 196 9.1E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS07350 81d12a5861edfde9abef7a589205d246 380 PRINTS PR00143 Citrate synthase signature 333 347 9.1E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS07350 81d12a5861edfde9abef7a589205d246 380 PRINTS PR00143 Citrate synthase signature 313 329 9.1E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS19865 37bf224c92a33ef244b90cb05145b178 454 Pfam PF04851 Type III restriction enzyme, res subunit 27 259 3.3E-6 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VV93_RS19865 37bf224c92a33ef244b90cb05145b178 454 SUPERFAMILY SSF52540 22 245 5.19E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS19865 37bf224c92a33ef244b90cb05145b178 454 PANTHER PTHR11472:SF37 1 448 5.6E-136 T 23-04-2016 VV93_RS19865 37bf224c92a33ef244b90cb05145b178 454 Gene3D G3DSA:3.40.50.300 19 125 1.4E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS19865 37bf224c92a33ef244b90cb05145b178 454 Gene3D G3DSA:3.40.50.300 201 245 1.4E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS19865 37bf224c92a33ef244b90cb05145b178 454 SMART SM00487 25 318 0.0069 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV93_RS19865 37bf224c92a33ef244b90cb05145b178 454 PANTHER PTHR11472 1 448 5.6E-136 T 23-04-2016 VV93_RS06040 501bce990fa9c5ba59c1d6e6243d1d0f 639 PANTHER PTHR30009 1 416 5.3E-169 T 23-04-2016 VV93_RS06040 501bce990fa9c5ba59c1d6e6243d1d0f 639 PANTHER PTHR30009 462 639 5.3E-169 T 23-04-2016 VV93_RS06040 501bce990fa9c5ba59c1d6e6243d1d0f 639 PANTHER PTHR30009:SF0 1 416 5.3E-169 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS06040 501bce990fa9c5ba59c1d6e6243d1d0f 639 PANTHER PTHR30009:SF0 462 639 5.3E-169 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS06040 501bce990fa9c5ba59c1d6e6243d1d0f 639 Pfam PF01578 Cytochrome C assembly protein 89 295 1.8E-42 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VV93_RS06040 501bce990fa9c5ba59c1d6e6243d1d0f 639 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 54 618 2.6E-171 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS06040 501bce990fa9c5ba59c1d6e6243d1d0f 639 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 620 1.6E-62 T 23-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VV93_RS06040 501bce990fa9c5ba59c1d6e6243d1d0f 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 8.5E-71 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS06040 501bce990fa9c5ba59c1d6e6243d1d0f 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 8.5E-71 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS06040 501bce990fa9c5ba59c1d6e6243d1d0f 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 8.5E-71 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS06040 501bce990fa9c5ba59c1d6e6243d1d0f 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 8.5E-71 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS06040 501bce990fa9c5ba59c1d6e6243d1d0f 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 8.5E-71 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS06040 501bce990fa9c5ba59c1d6e6243d1d0f 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 309 328 8.5E-71 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS06040 501bce990fa9c5ba59c1d6e6243d1d0f 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 8.5E-71 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS06040 501bce990fa9c5ba59c1d6e6243d1d0f 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 131 148 8.5E-71 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS06465 eb8474f5d2e4551f07bd3f970c3d5ddf 135 PIRSF PIRSF002096 1 135 2.1E-54 T 23-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VV93_RS06465 eb8474f5d2e4551f07bd3f970c3d5ddf 135 Gene3D G3DSA:4.10.430.10 92 135 2.4E-26 T 23-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VV93_RS06465 eb8474f5d2e4551f07bd3f970c3d5ddf 135 PANTHER PTHR38097 2 135 8.6E-64 T 23-04-2016 VV93_RS06465 eb8474f5d2e4551f07bd3f970c3d5ddf 135 SUPERFAMILY SSF81273 2 58 3.14E-16 T 23-04-2016 VV93_RS06465 eb8474f5d2e4551f07bd3f970c3d5ddf 135 Gene3D G3DSA:1.10.287.1050 1 58 6.3E-18 T 23-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 VV93_RS06465 eb8474f5d2e4551f07bd3f970c3d5ddf 135 SMART SM00528 88 135 2.9E-25 T 23-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VV93_RS06465 eb8474f5d2e4551f07bd3f970c3d5ddf 135 SUPERFAMILY SSF81273 93 135 4.71E-12 T 23-04-2016 VV93_RS06465 eb8474f5d2e4551f07bd3f970c3d5ddf 135 Pfam PF00816 H-NS histone family 32 129 1.3E-19 T 23-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VV93_RS06465 eb8474f5d2e4551f07bd3f970c3d5ddf 135 PANTHER PTHR38097:SF2 2 135 8.6E-64 T 23-04-2016 VV93_RS14095 63a4f6cd497fede8795dcb0262ee5949 70 SUPERFAMILY SSF118001 1 70 1.44E-28 T 23-04-2016 IPR010648 Uncharacterised protein family UPF0270 VV93_RS14095 63a4f6cd497fede8795dcb0262ee5949 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 2.6E-34 T 23-04-2016 IPR010648 Uncharacterised protein family UPF0270 VV93_RS14095 63a4f6cd497fede8795dcb0262ee5949 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 53 4.0E-24 T 23-04-2016 IPR010648 Uncharacterised protein family UPF0270 VV93_RS14095 63a4f6cd497fede8795dcb0262ee5949 70 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.109 T 23-04-2016 IPR010648 Uncharacterised protein family UPF0270 VV93_RS14095 63a4f6cd497fede8795dcb0262ee5949 70 Gene3D G3DSA:1.10.10.610 1 70 1.2E-35 T 23-04-2016 IPR010648 Uncharacterised protein family UPF0270 VV93_RS14095 63a4f6cd497fede8795dcb0262ee5949 70 PIRSF PIRSF006169 1 70 2.2E-36 T 23-04-2016 IPR010648 Uncharacterised protein family UPF0270 VV93_RS03255 2bd2ec621959bdccc47ff03ff29b2ec1 102 PIRSF PIRSF003196 1 100 3.9E-41 T 23-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VV93_RS03255 2bd2ec621959bdccc47ff03ff29b2ec1 102 TIGRFAM TIGR01321 TrpR: trp operon repressor 2 84 4.1E-27 T 23-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VV93_RS03255 2bd2ec621959bdccc47ff03ff29b2ec1 102 SUPERFAMILY SSF48295 2 95 1.78E-30 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 VV93_RS03255 2bd2ec621959bdccc47ff03ff29b2ec1 102 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 81 2.0E-39 T 23-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VV93_RS03255 2bd2ec621959bdccc47ff03ff29b2ec1 102 PANTHER PTHR38025 1 100 2.0E-38 T 23-04-2016 VV93_RS03255 2bd2ec621959bdccc47ff03ff29b2ec1 102 Pfam PF01371 Trp repressor protein 9 94 5.1E-34 T 23-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 VV93_RS03255 2bd2ec621959bdccc47ff03ff29b2ec1 102 Gene3D G3DSA:1.10.1270.10 2 96 6.0E-38 T 23-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 VV93_RS03255 2bd2ec621959bdccc47ff03ff29b2ec1 102 Hamap MF_00475 Trp operon repressor [trpR]. 6 99 23.735 T 23-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VV93_RS03255 2bd2ec621959bdccc47ff03ff29b2ec1 102 PANTHER PTHR38025:SF1 1 100 2.0E-38 T 23-04-2016 VV93_RS01340 26bb07361c9781ca970fb6783e67873d 62 SUPERFAMILY SSF47598 11 50 1.28E-6 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 VV93_RS01340 26bb07361c9781ca970fb6783e67873d 62 Gene3D G3DSA:1.10.1220.10 11 48 3.1E-6 T 23-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VV93_RS09075 1f1f9fc7acfd238893c682208c447339 515 SMART SM00267 348 514 2.9E-38 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09075 1f1f9fc7acfd238893c682208c447339 515 SMART SM01079 80 276 8.4E-37 T 23-04-2016 IPR006189 CHASE domain VV93_RS09075 1f1f9fc7acfd238893c682208c447339 515 PANTHER PTHR10799 236 509 4.6E-19 T 23-04-2016 VV93_RS09075 1f1f9fc7acfd238893c682208c447339 515 SUPERFAMILY SSF55073 364 513 2.04E-38 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS09075 1f1f9fc7acfd238893c682208c447339 515 Pfam PF03924 CHASE domain 85 274 3.0E-28 T 23-04-2016 IPR006189 CHASE domain VV93_RS09075 1f1f9fc7acfd238893c682208c447339 515 Pfam PF00990 Diguanylate cyclase, GGDEF domain 360 509 6.4E-35 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09075 1f1f9fc7acfd238893c682208c447339 515 Gene3D G3DSA:3.30.70.270 361 513 2.1E-44 T 23-04-2016 VV93_RS09075 1f1f9fc7acfd238893c682208c447339 515 PANTHER PTHR10799:SF710 236 509 4.6E-19 T 23-04-2016 VV93_RS09075 1f1f9fc7acfd238893c682208c447339 515 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 355 513 3.4E-34 T 23-04-2016 IPR000160 GGDEF domain VV93_RS14550 668ca28313a3e435a9f05919468ff562 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 2.1E-104 T 23-04-2016 VV93_RS14550 668ca28313a3e435a9f05919468ff562 295 PANTHER PTHR18895:SF69 12 291 1.3E-157 T 23-04-2016 VV93_RS14550 668ca28313a3e435a9f05919468ff562 295 PANTHER PTHR18895 12 291 1.3E-157 T 23-04-2016 VV93_RS14550 668ca28313a3e435a9f05919468ff562 295 SUPERFAMILY SSF53335 44 274 1.52E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS14550 668ca28313a3e435a9f05919468ff562 295 Gene3D G3DSA:3.40.50.150 99 287 1.7E-42 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS14550 668ca28313a3e435a9f05919468ff562 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 2.4E-108 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VV93_RS14550 668ca28313a3e435a9f05919468ff562 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.279 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VV93_RS14550 668ca28313a3e435a9f05919468ff562 295 PIRSF PIRSF000401 1 295 2.5E-99 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VV93_RS03420 8af8e65c59ef567d50ae38082592a603 700 Gene3D G3DSA:3.30.870.10 500 684 2.4E-70 T 23-04-2016 VV93_RS03420 8af8e65c59ef567d50ae38082592a603 700 SUPERFAMILY SSF143724 107 313 5.1E-63 T 23-04-2016 VV93_RS03420 8af8e65c59ef567d50ae38082592a603 700 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 5.5E-146 T 23-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 VV93_RS03420 8af8e65c59ef567d50ae38082592a603 700 Gene3D G3DSA:3.30.1840.10 106 300 3.3E-54 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 VV93_RS03420 8af8e65c59ef567d50ae38082592a603 700 SUPERFAMILY SSF56024 315 494 1.1E-55 T 23-04-2016 VV93_RS03420 8af8e65c59ef567d50ae38082592a603 700 PIRSF PIRSF015589 1 694 5.3E-253 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VV93_RS03420 8af8e65c59ef567d50ae38082592a603 700 Pfam PF02503 Polyphosphate kinase middle domain 119 319 9.1E-46 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 VV93_RS03420 8af8e65c59ef567d50ae38082592a603 700 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 4.1E-264 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VV93_RS03420 8af8e65c59ef567d50ae38082592a603 700 PANTHER PTHR30218 1 700 0.0 T 23-04-2016 VV93_RS03420 8af8e65c59ef567d50ae38082592a603 700 PANTHER PTHR30218:SF0 1 700 0.0 T 23-04-2016 VV93_RS03420 8af8e65c59ef567d50ae38082592a603 700 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 32.236 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VV93_RS03420 8af8e65c59ef567d50ae38082592a603 700 SUPERFAMILY SSF140356 4 105 3.53E-32 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 VV93_RS03420 8af8e65c59ef567d50ae38082592a603 700 SUPERFAMILY SSF56024 500 683 8.75E-68 T 23-04-2016 VV93_RS03420 8af8e65c59ef567d50ae38082592a603 700 Gene3D G3DSA:3.30.870.10 315 499 9.2E-73 T 23-04-2016 VV93_RS03420 8af8e65c59ef567d50ae38082592a603 700 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 1.1E-30 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 VV93_RS12430 9b51b37684e389d39752239017a8f6a5 421 Pfam PF02447 GntP family permease 9 414 2.9E-23 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VV93_RS12430 9b51b37684e389d39752239017a8f6a5 421 PANTHER PTHR30354 1 421 4.6E-122 T 23-04-2016 VV93_RS12430 9b51b37684e389d39752239017a8f6a5 421 PANTHER PTHR30354:SF1 1 421 4.6E-122 T 23-04-2016 VV93_RS07585 e82759f3e6d5e55299f78c04caf1db94 244 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 242 1.2E-50 T 23-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 VV93_RS07585 e82759f3e6d5e55299f78c04caf1db94 244 PANTHER PTHR11054 5 243 6.3E-69 T 23-04-2016 VV93_RS07585 e82759f3e6d5e55299f78c04caf1db94 244 Gene3D G3DSA:3.40.50.1360 3 243 6.7E-69 T 23-04-2016 VV93_RS07585 e82759f3e6d5e55299f78c04caf1db94 244 SUPERFAMILY SSF100950 3 243 5.76E-57 T 23-04-2016 VV93_RS07585 e82759f3e6d5e55299f78c04caf1db94 244 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 230 4.2E-59 T 23-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VV93_RS01685 f89915eb9d333717021db3bb53df0abc 726 PANTHER PTHR32309:SF17 1 128 8.4E-224 T 23-04-2016 VV93_RS01685 f89915eb9d333717021db3bb53df0abc 726 PANTHER PTHR32309:SF17 192 726 8.4E-224 T 23-04-2016 VV93_RS01685 f89915eb9d333717021db3bb53df0abc 726 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 513 716 6.0E-51 T 23-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 VV93_RS01685 f89915eb9d333717021db3bb53df0abc 726 Pfam PF13614 AAA domain 542 655 1.6E-11 T 23-04-2016 IPR025669 AAA domain VV93_RS01685 f89915eb9d333717021db3bb53df0abc 726 Pfam PF13807 G-rich domain on putative tyrosine kinase 374 454 1.1E-34 T 23-04-2016 IPR032807 Tyrosine kinase, G-rich domain VV93_RS01685 f89915eb9d333717021db3bb53df0abc 726 Gene3D G3DSA:3.40.50.300 527 710 2.1E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01685 f89915eb9d333717021db3bb53df0abc 726 Pfam PF02706 Chain length determinant protein 19 258 2.8E-39 T 23-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 VV93_RS01685 f89915eb9d333717021db3bb53df0abc 726 PANTHER PTHR32309 1 128 8.4E-224 T 23-04-2016 VV93_RS01685 f89915eb9d333717021db3bb53df0abc 726 PANTHER PTHR32309 192 726 8.4E-224 T 23-04-2016 VV93_RS01685 f89915eb9d333717021db3bb53df0abc 726 SUPERFAMILY SSF52540 526 710 9.58E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS17380 df2d95e644756bf0be2e7babd6d578db 457 SUPERFAMILY SSF103190 99 190 1.8E-22 T 23-04-2016 IPR029151 Periplasmic sensor domain-like VV93_RS17380 df2d95e644756bf0be2e7babd6d578db 457 SUPERFAMILY SSF55073 362 455 5.18E-26 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS17380 df2d95e644756bf0be2e7babd6d578db 457 SMART SM00267 346 457 2.2E-8 T 23-04-2016 IPR000160 GGDEF domain VV93_RS17380 df2d95e644756bf0be2e7babd6d578db 457 Gene3D G3DSA:3.30.450.20 240 348 2.2E-14 T 23-04-2016 VV93_RS17380 df2d95e644756bf0be2e7babd6d578db 457 Gene3D G3DSA:3.30.450.20 99 192 1.1E-25 T 23-04-2016 VV93_RS17380 df2d95e644756bf0be2e7babd6d578db 457 Pfam PF00990 Diguanylate cyclase, GGDEF domain 359 454 9.2E-30 T 23-04-2016 IPR000160 GGDEF domain VV93_RS17380 df2d95e644756bf0be2e7babd6d578db 457 SUPERFAMILY SSF103190 1 98 5.1E-23 T 23-04-2016 IPR029151 Periplasmic sensor domain-like VV93_RS17380 df2d95e644756bf0be2e7babd6d578db 457 Pfam PF13426 PAS domain 244 344 6.8E-10 T 23-04-2016 IPR000014 PAS domain VV93_RS17380 df2d95e644756bf0be2e7babd6d578db 457 Gene3D G3DSA:3.30.70.270 359 455 9.0E-30 T 23-04-2016 VV93_RS17380 df2d95e644756bf0be2e7babd6d578db 457 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 354 453 7.9E-32 T 23-04-2016 IPR000160 GGDEF domain VV93_RS17380 df2d95e644756bf0be2e7babd6d578db 457 SMART SM00091 232 299 7.4E-4 T 23-04-2016 IPR000014 PAS domain VV93_RS17380 df2d95e644756bf0be2e7babd6d578db 457 SUPERFAMILY SSF55785 244 354 2.97E-16 T 23-04-2016 IPR000014 PAS domain VV93_RS17380 df2d95e644756bf0be2e7babd6d578db 457 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 236 353 5.2E-12 T 23-04-2016 IPR000014 PAS domain VV93_RS17380 df2d95e644756bf0be2e7babd6d578db 457 Gene3D G3DSA:3.30.450.20 1 98 4.3E-24 T 23-04-2016 VV93_RS14180 bc601cfc77b77aa3fcf0f5182e59e127 211 SUPERFAMILY SSF81901 64 186 9.29E-23 T 23-04-2016 VV93_RS14180 bc601cfc77b77aa3fcf0f5182e59e127 211 SMART SM00671 144 179 22.0 T 23-04-2016 IPR006597 Sel1-like repeat VV93_RS14180 bc601cfc77b77aa3fcf0f5182e59e127 211 SMART SM00671 72 107 0.0067 T 23-04-2016 IPR006597 Sel1-like repeat VV93_RS14180 bc601cfc77b77aa3fcf0f5182e59e127 211 SMART SM00671 108 143 2.9E-6 T 23-04-2016 IPR006597 Sel1-like repeat VV93_RS14180 bc601cfc77b77aa3fcf0f5182e59e127 211 Pfam PF08238 Sel1 repeat 74 106 0.029 T 23-04-2016 IPR006597 Sel1-like repeat VV93_RS14180 bc601cfc77b77aa3fcf0f5182e59e127 211 Pfam PF08238 Sel1 repeat 108 143 1.6E-5 T 23-04-2016 IPR006597 Sel1-like repeat VV93_RS14180 bc601cfc77b77aa3fcf0f5182e59e127 211 PANTHER PTHR11102 33 175 2.3E-15 T 23-04-2016 VV93_RS14180 bc601cfc77b77aa3fcf0f5182e59e127 211 Gene3D G3DSA:1.25.40.10 65 178 5.4E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS11910 936434c9ba5ae617d65693463758eb89 477 PANTHER PTHR11785:SF342 39 456 1.0E-73 T 23-04-2016 VV93_RS11910 936434c9ba5ae617d65693463758eb89 477 PIRSF PIRSF006060 1 475 2.8E-49 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VV93_RS11910 936434c9ba5ae617d65693463758eb89 477 Pfam PF13520 Amino acid permease 11 439 1.2E-30 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VV93_RS11910 936434c9ba5ae617d65693463758eb89 477 PANTHER PTHR11785 39 456 1.0E-73 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 PRINTS PR00097 Anthranilate synthase component II signature 210 221 9.3E-6 T 23-04-2016 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 PRINTS PR00097 Anthranilate synthase component II signature 182 191 9.3E-6 T 23-04-2016 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 PRINTS PR00097 Anthranilate synthase component II signature 295 308 9.3E-6 T 23-04-2016 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 PANTHER PTHR11405 135 312 1.5E-195 T 23-04-2016 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 PANTHER PTHR11405 1 119 1.5E-195 T 23-04-2016 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 Gene3D G3DSA:3.40.50.880 100 310 7.7E-78 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 SMART SM01097 1 79 3.6E-24 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 PRINTS PR00096 Glutamine amidotransferase superfamily signature 182 191 2.9E-11 T 23-04-2016 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 PRINTS PR00096 Glutamine amidotransferase superfamily signature 295 308 2.9E-11 T 23-04-2016 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 PRINTS PR00096 Glutamine amidotransferase superfamily signature 210 221 2.9E-11 T 23-04-2016 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 SUPERFAMILY SSF52021 1 88 4.32E-28 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 SUPERFAMILY SSF52317 99 312 3.21E-60 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 1 78 1.5E-24 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 1 311 1.5E-115 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 Pfam PF00117 Glutamine amidotransferase class-I 143 312 1.0E-44 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 252 263 3.2E-40 T 23-04-2016 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 179 193 3.2E-40 T 23-04-2016 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 140 154 3.2E-40 T 23-04-2016 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 227 244 3.2E-40 T 23-04-2016 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 210 226 3.2E-40 T 23-04-2016 VV93_RS17920 c9b451acc227d601ae7c8b61aeaf900e 312 Gene3D G3DSA:3.50.30.20 1 91 1.7E-31 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VV93_RS13860 fe9e6791bdc55a6e9f8a4ed056232fcf 263 PIRSF PIRSF000728 2 262 4.0E-70 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS13860 fe9e6791bdc55a6e9f8a4ed056232fcf 263 PANTHER PTHR23342 6 263 5.1E-84 T 23-04-2016 VV93_RS13860 fe9e6791bdc55a6e9f8a4ed056232fcf 263 SUPERFAMILY SSF53633 8 262 4.19E-59 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS13860 fe9e6791bdc55a6e9f8a4ed056232fcf 263 Gene3D G3DSA:3.40.1160.10 9 260 9.9E-76 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS13860 fe9e6791bdc55a6e9f8a4ed056232fcf 263 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 235 2.1E-64 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS13860 fe9e6791bdc55a6e9f8a4ed056232fcf 263 Hamap MF_00082_B Acetylglutamate kinase [argB]. 5 262 26.802 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VV93_RS13860 fe9e6791bdc55a6e9f8a4ed056232fcf 263 Pfam PF00696 Amino acid kinase family 9 231 1.6E-36 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS04175 5244b902bde75b1999e4dd8112840d48 269 PANTHER PTHR30429 3 269 5.7E-141 T 23-04-2016 IPR004872 Lipoprotein NlpA family VV93_RS04175 5244b902bde75b1999e4dd8112840d48 269 PANTHER PTHR30429:SF1 3 269 5.7E-141 T 23-04-2016 VV93_RS04175 5244b902bde75b1999e4dd8112840d48 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 1.6E-124 T 23-04-2016 IPR004872 Lipoprotein NlpA family VV93_RS04175 5244b902bde75b1999e4dd8112840d48 269 Gene3D G3DSA:3.40.190.10 30 161 1.1E-55 T 23-04-2016 VV93_RS04175 5244b902bde75b1999e4dd8112840d48 269 PIRSF PIRSF002854 1 269 1.4E-100 T 23-04-2016 IPR004872 Lipoprotein NlpA family VV93_RS04175 5244b902bde75b1999e4dd8112840d48 269 Pfam PF03180 NLPA lipoprotein 33 269 3.9E-98 T 23-04-2016 IPR004872 Lipoprotein NlpA family VV93_RS04175 5244b902bde75b1999e4dd8112840d48 269 SUPERFAMILY SSF53850 32 269 1.21E-80 T 23-04-2016 VV93_RS02345 8ec2abf3b4c09d1b373a9f078d4a1583 185 Gene3D G3DSA:1.20.144.10 16 180 8.1E-40 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VV93_RS02345 8ec2abf3b4c09d1b373a9f078d4a1583 185 PANTHER PTHR14969 14 184 3.3E-27 T 23-04-2016 VV93_RS02345 8ec2abf3b4c09d1b373a9f078d4a1583 185 SMART SM00014 71 180 2.5E-18 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VV93_RS02345 8ec2abf3b4c09d1b373a9f078d4a1583 185 SUPERFAMILY SSF48317 17 182 2.62E-37 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VV93_RS02345 8ec2abf3b4c09d1b373a9f078d4a1583 185 Pfam PF01569 PAP2 superfamily 70 182 6.4E-21 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VV93_RS08875 275b4c84f44873dcd46f760483e68181 190 PANTHER PTHR11019 69 184 9.2E-19 T 23-04-2016 VV93_RS08875 275b4c84f44873dcd46f760483e68181 190 Gene3D G3DSA:3.40.50.880 1 189 6.0E-55 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS08875 275b4c84f44873dcd46f760483e68181 190 SUPERFAMILY SSF52317 1 188 6.54E-49 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS08875 275b4c84f44873dcd46f760483e68181 190 Pfam PF01965 DJ-1/PfpI family 3 169 9.8E-22 T 23-04-2016 IPR002818 DJ-1/PfpI VV93_RS08875 275b4c84f44873dcd46f760483e68181 190 PANTHER PTHR11019:SF68 69 184 9.2E-19 T 23-04-2016 VV93_RS09030 ce1131ce975ede31cdd93bd6f778ffed 899 SUPERFAMILY SSF49363 680 730 8.89E-7 T 23-04-2016 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 VV93_RS09030 ce1131ce975ede31cdd93bd6f778ffed 899 ProSitePatterns PS00018 EF-hand calcium-binding domain. 456 468 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site VV93_RS09030 ce1131ce975ede31cdd93bd6f778ffed 899 Gene3D G3DSA:2.60.40.10 659 744 6.0E-7 T 23-04-2016 IPR013783 Immunoglobulin-like fold VV93_RS09030 ce1131ce975ede31cdd93bd6f778ffed 899 ProSitePatterns PS00018 EF-hand calcium-binding domain. 158 170 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site VV93_RS11625 922d5beb07596442bbece8fb3c1a53cd 198 PIRSF PIRSF006102 1 198 9.5E-66 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VV93_RS11625 922d5beb07596442bbece8fb3c1a53cd 198 PANTHER PTHR30335:SF1 2 198 4.7E-146 T 23-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VV93_RS11625 922d5beb07596442bbece8fb3c1a53cd 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 2.0E-107 T 23-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VV93_RS11625 922d5beb07596442bbece8fb3c1a53cd 198 PANTHER PTHR30335 2 198 4.7E-146 T 23-04-2016 VV93_RS11625 922d5beb07596442bbece8fb3c1a53cd 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.8E-59 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VV93_RS11625 922d5beb07596442bbece8fb3c1a53cd 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.873 T 23-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VV93_RS00950 8f476aae88268d81fa265780a99b5691 205 SUPERFAMILY SSF46626 16 104 1.14E-20 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS00950 8f476aae88268d81fa265780a99b5691 205 PIRSF PIRSF000005 1 205 4.9E-65 T 23-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 VV93_RS00950 8f476aae88268d81fa265780a99b5691 205 SUPERFAMILY SSF46626 114 203 7.24E-20 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS00950 8f476aae88268d81fa265780a99b5691 205 PANTHER PTHR33751:SF3 1 205 1.0E-76 T 23-04-2016 VV93_RS00950 8f476aae88268d81fa265780a99b5691 205 Pfam PF00034 Cytochrome c 25 103 1.3E-10 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS00950 8f476aae88268d81fa265780a99b5691 205 Pfam PF00034 Cytochrome c 117 201 1.2E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS00950 8f476aae88268d81fa265780a99b5691 205 Gene3D G3DSA:1.10.760.10 122 203 1.1E-28 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS00950 8f476aae88268d81fa265780a99b5691 205 Gene3D G3DSA:1.10.760.10 20 105 3.1E-28 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS00950 8f476aae88268d81fa265780a99b5691 205 PANTHER PTHR33751 1 205 1.0E-76 T 23-04-2016 VV93_RS03030 8171fd0b267cf94a448698c43f6d7836 258 Pfam PF03883 Protein of unknown function (DUF328) 1 243 8.4E-94 T 23-04-2016 IPR005583 Peroxide stress protein YaaA VV93_RS03030 8171fd0b267cf94a448698c43f6d7836 258 PANTHER PTHR30283 2 255 3.7E-122 T 23-04-2016 VV93_RS03030 8171fd0b267cf94a448698c43f6d7836 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.717 T 23-04-2016 IPR005583 Peroxide stress protein YaaA VV93_RS03030 8171fd0b267cf94a448698c43f6d7836 258 PANTHER PTHR30283:SF3 2 255 3.7E-122 T 23-04-2016 VV93_RS03635 171e21654729fbae6786093a299d152e 294 SUPERFAMILY SSF55186 122 272 1.14E-11 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 VV93_RS06365 46b76fc2af0b54cedb78ebb5b0107ec6 435 PIRSF PIRSF001529 1 435 1.1E-186 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VV93_RS06365 46b76fc2af0b54cedb78ebb5b0107ec6 435 SUPERFAMILY SSF55681 118 429 1.49E-97 T 23-04-2016 VV93_RS06365 46b76fc2af0b54cedb78ebb5b0107ec6 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 3.6E-29 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 VV93_RS06365 46b76fc2af0b54cedb78ebb5b0107ec6 435 PANTHER PTHR11778 1 434 1.4E-209 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VV93_RS06365 46b76fc2af0b54cedb78ebb5b0107ec6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 9.8E-34 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VV93_RS06365 46b76fc2af0b54cedb78ebb5b0107ec6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 9.8E-34 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VV93_RS06365 46b76fc2af0b54cedb78ebb5b0107ec6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 9.8E-34 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VV93_RS06365 46b76fc2af0b54cedb78ebb5b0107ec6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 9.8E-34 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VV93_RS06365 46b76fc2af0b54cedb78ebb5b0107ec6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 9.8E-34 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VV93_RS06365 46b76fc2af0b54cedb78ebb5b0107ec6 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 230 411 1.4E-34 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS06365 46b76fc2af0b54cedb78ebb5b0107ec6 435 PANTHER PTHR11778:SF0 1 434 1.4E-209 T 23-04-2016 VV93_RS06365 46b76fc2af0b54cedb78ebb5b0107ec6 435 SUPERFAMILY SSF46589 1 114 2.51E-27 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 VV93_RS06365 46b76fc2af0b54cedb78ebb5b0107ec6 435 Gene3D G3DSA:3.30.930.10 107 431 7.2E-138 T 23-04-2016 VV93_RS06365 46b76fc2af0b54cedb78ebb5b0107ec6 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 1.7E-171 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VV93_RS06365 46b76fc2af0b54cedb78ebb5b0107ec6 435 Gene3D G3DSA:1.10.287.40 1 106 1.6E-23 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 VV93_RS06365 46b76fc2af0b54cedb78ebb5b0107ec6 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.042 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VV93_RS17680 a11c3b01160620487d46c5d0dc2e61f2 172 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 4 99 7.4E-40 T 23-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VV93_RS17680 a11c3b01160620487d46c5d0dc2e61f2 172 PANTHER PTHR30621 1 172 1.3E-72 T 23-04-2016 VV93_RS17680 a11c3b01160620487d46c5d0dc2e61f2 172 SUPERFAMILY SSF81301 7 109 3.6E-36 T 23-04-2016 VV93_RS17680 a11c3b01160620487d46c5d0dc2e61f2 172 Gene3D G3DSA:3.30.460.10 8 105 1.1E-35 T 23-04-2016 VV93_RS17680 a11c3b01160620487d46c5d0dc2e61f2 172 SUPERFAMILY SSF81593 110 171 1.41E-17 T 23-04-2016 VV93_RS08150 291273155cc60f19d0706e5a6e98a52c 530 SMART SM00382 343 511 1.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS08150 291273155cc60f19d0706e5a6e98a52c 530 SMART SM00382 26 238 3.7E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS08150 291273155cc60f19d0706e5a6e98a52c 530 Pfam PF12848 ABC transporter 224 309 9.0E-22 T 23-04-2016 IPR032781 ABC-transporter extension domain VV93_RS08150 291273155cc60f19d0706e5a6e98a52c 530 Gene3D G3DSA:3.40.50.300 4 100 1.3E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08150 291273155cc60f19d0706e5a6e98a52c 530 Gene3D G3DSA:3.40.50.300 132 281 1.3E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08150 291273155cc60f19d0706e5a6e98a52c 530 Gene3D G3DSA:3.40.50.300 319 527 6.1E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08150 291273155cc60f19d0706e5a6e98a52c 530 SUPERFAMILY SSF52540 334 517 4.04E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08150 291273155cc60f19d0706e5a6e98a52c 530 SUPERFAMILY SSF52540 7 237 2.62E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08150 291273155cc60f19d0706e5a6e98a52c 530 PANTHER PTHR19211:SF38 1 525 0.0 T 23-04-2016 VV93_RS08150 291273155cc60f19d0706e5a6e98a52c 530 PANTHER PTHR19211 1 525 0.0 T 23-04-2016 VV93_RS08150 291273155cc60f19d0706e5a6e98a52c 530 Pfam PF00005 ABC transporter 337 466 1.3E-20 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS08150 291273155cc60f19d0706e5a6e98a52c 530 Pfam PF00005 ABC transporter 18 184 2.5E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS06030 08de03f0ae185e6c5107d2863fb37805 228 PANTHER PTHR11938 5 199 4.4E-89 T 23-04-2016 VV93_RS06030 08de03f0ae185e6c5107d2863fb37805 228 Pfam PF12800 4Fe-4S binding domain 52 63 0.26 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV93_RS06030 08de03f0ae185e6c5107d2863fb37805 228 Pfam PF13247 4Fe-4S dicluster domain 91 188 2.3E-26 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV93_RS06030 08de03f0ae185e6c5107d2863fb37805 228 PANTHER PTHR11938:SF110 5 199 4.4E-89 T 23-04-2016 VV93_RS06030 08de03f0ae185e6c5107d2863fb37805 228 SUPERFAMILY SSF54862 42 224 1.15E-62 T 23-04-2016 VV93_RS06030 08de03f0ae185e6c5107d2863fb37805 228 Gene3D G3DSA:3.30.70.20 173 225 5.2E-32 T 23-04-2016 VV93_RS06030 08de03f0ae185e6c5107d2863fb37805 228 Gene3D G3DSA:3.30.70.20 43 98 5.2E-32 T 23-04-2016 VV93_RS06030 08de03f0ae185e6c5107d2863fb37805 228 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 228 1.3E-133 T 23-04-2016 IPR017567 Cytochrome c nitrite reductase, Fe-S protein VV93_RS06030 08de03f0ae185e6c5107d2863fb37805 228 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 132 143 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV93_RS06030 08de03f0ae185e6c5107d2863fb37805 228 Gene3D G3DSA:3.30.70.20 136 172 8.2E-15 T 23-04-2016 VV93_RS06030 08de03f0ae185e6c5107d2863fb37805 228 Gene3D G3DSA:3.30.70.20 99 135 2.1E-13 T 23-04-2016 VV93_RS23075 890e75a4de994bdb2ec192e39c50c806 129 Gene3D G3DSA:1.10.260.40 3 98 2.1E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS23075 890e75a4de994bdb2ec192e39c50c806 129 PANTHER PTHR10245 1 83 2.7E-16 T 23-04-2016 VV93_RS23075 890e75a4de994bdb2ec192e39c50c806 129 SMART SM00530 6 61 5.6E-14 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV93_RS23075 890e75a4de994bdb2ec192e39c50c806 129 Pfam PF12844 Helix-turn-helix domain 4 65 3.1E-15 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV93_RS23075 890e75a4de994bdb2ec192e39c50c806 129 SUPERFAMILY SSF47413 1 65 1.13E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS05700 429c7f49d217382277a132660aab9fc8 841 Pfam PF12838 4Fe-4S dicluster domain 378 430 2.2E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV93_RS05700 429c7f49d217382277a132660aab9fc8 841 SUPERFAMILY SSF46548 336 446 5.89E-20 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VV93_RS05700 429c7f49d217382277a132660aab9fc8 841 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 8.3E-37 T 23-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain VV93_RS05700 429c7f49d217382277a132660aab9fc8 841 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 769 246.959 T 23-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VV93_RS05700 429c7f49d217382277a132660aab9fc8 841 PANTHER PTHR11780:SF1 1 483 2.5E-237 T 23-04-2016 VV93_RS05700 429c7f49d217382277a132660aab9fc8 841 SUPERFAMILY SSF142019 96 302 2.09E-59 T 23-04-2016 VV93_RS05700 429c7f49d217382277a132660aab9fc8 841 Pfam PF10531 SLBB domain 296 345 3.8E-10 T 23-04-2016 IPR019554 Soluble ligand binding domain VV93_RS05700 429c7f49d217382277a132660aab9fc8 841 PANTHER PTHR11780 1 483 2.5E-237 T 23-04-2016 VV93_RS05700 429c7f49d217382277a132660aab9fc8 841 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 2.7E-48 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain VV93_RS05700 429c7f49d217382277a132660aab9fc8 841 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 378 389 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV93_RS05700 429c7f49d217382277a132660aab9fc8 841 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV93_RS05700 429c7f49d217382277a132660aab9fc8 841 Gene3D G3DSA:1.10.1060.10 361 449 2.7E-18 T 23-04-2016 VV93_RS05700 429c7f49d217382277a132660aab9fc8 841 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 4.0E-190 T 23-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VV93_RS20855 46efee89bca8051d02991ec9f9f164fe 101 PANTHER PTHR23264 1 101 1.7E-63 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein VV93_RS20855 46efee89bca8051d02991ec9f9f164fe 101 PANTHER PTHR23264:SF19 1 101 1.7E-63 T 23-04-2016 VV93_RS20855 46efee89bca8051d02991ec9f9f164fe 101 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 2 100 3.3E-45 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein VV93_RS20855 46efee89bca8051d02991ec9f9f164fe 101 SUPERFAMILY SSF52540 2 98 3.55E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS20855 46efee89bca8051d02991ec9f9f164fe 101 Gene3D G3DSA:3.40.50.300 2 100 5.1E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS20855 46efee89bca8051d02991ec9f9f164fe 101 ProSitePatterns PS01215 Mrp family signature. 23 39 - T 23-04-2016 IPR000808 Mrp, conserved site GO:0005524 VV93_RS17830 e63ce17bd824911c031a24e8cebdbc60 129 Pfam PF00905 Penicillin binding protein transpeptidase domain 3 129 1.6E-25 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VV93_RS17830 e63ce17bd824911c031a24e8cebdbc60 129 Gene3D G3DSA:3.40.710.10 2 129 7.5E-27 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS17830 e63ce17bd824911c031a24e8cebdbc60 129 PANTHER PTHR30627 1 129 9.7E-43 T 23-04-2016 VV93_RS17830 e63ce17bd824911c031a24e8cebdbc60 129 SUPERFAMILY SSF56601 3 129 7.65E-29 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS17830 e63ce17bd824911c031a24e8cebdbc60 129 PANTHER PTHR30627:SF1 1 129 9.7E-43 T 23-04-2016 VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 Gene3D G3DSA:1.10.490.10 2 140 6.0E-53 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 1.4E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 356 364 1.4E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 1.4E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 1.4E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 PANTHER PTHR22924 1 390 1.2E-119 T 23-04-2016 VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 SUPERFAMILY SSF46458 1 142 3.49E-37 T 23-04-2016 IPR009050 Globin-like VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 Pfam PF00042 Globin 8 102 2.3E-14 T 23-04-2016 IPR000971 Globin GO:0019825|GO:0020037 VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 PANTHER PTHR22924:SF49 1 390 1.2E-119 T 23-04-2016 VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 394 56.852 T 23-04-2016 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 SUPERFAMILY SSF63380 149 254 5.68E-29 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 Gene3D G3DSA:3.40.50.80 259 393 1.8E-35 T 23-04-2016 VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 1.4E-16 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 Pfam PF00970 Oxidoreductase FAD-binding domain 155 252 1.1E-11 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 SUPERFAMILY SSF52343 256 393 3.01E-37 T 23-04-2016 VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 Gene3D G3DSA:2.40.30.10 149 254 3.5E-33 T 23-04-2016 VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 4.2E-10 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 4.2E-10 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 4.2E-10 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VV93_RS14175 4c2a2e8584328e2d774227dbaf5f7749 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 4.2E-10 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VV93_RS06460 22512e40c126a1021deed6740c35753a 434 Pfam PF00294 pfkB family carbohydrate kinase 77 292 7.3E-10 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB VV93_RS06460 22512e40c126a1021deed6740c35753a 434 PANTHER PTHR10584:SF202 17 293 4.8E-244 T 23-04-2016 VV93_RS06460 22512e40c126a1021deed6740c35753a 434 PANTHER PTHR10584:SF202 332 376 4.8E-244 T 23-04-2016 VV93_RS06460 22512e40c126a1021deed6740c35753a 434 PANTHER PTHR10584:SF202 393 434 4.8E-244 T 23-04-2016 VV93_RS06460 22512e40c126a1021deed6740c35753a 434 SUPERFAMILY SSF53613 338 417 1.34E-43 T 23-04-2016 IPR029056 Ribokinase-like VV93_RS06460 22512e40c126a1021deed6740c35753a 434 SUPERFAMILY SSF53613 31 305 1.34E-43 T 23-04-2016 IPR029056 Ribokinase-like VV93_RS06460 22512e40c126a1021deed6740c35753a 434 PANTHER PTHR10584 17 293 4.8E-244 T 23-04-2016 VV93_RS06460 22512e40c126a1021deed6740c35753a 434 PANTHER PTHR10584 332 376 4.8E-244 T 23-04-2016 VV93_RS06460 22512e40c126a1021deed6740c35753a 434 PANTHER PTHR10584 393 434 4.8E-244 T 23-04-2016 VV93_RS06460 22512e40c126a1021deed6740c35753a 434 Gene3D G3DSA:3.40.1190.20 337 434 1.8E-45 T 23-04-2016 IPR029056 Ribokinase-like VV93_RS06460 22512e40c126a1021deed6740c35753a 434 Gene3D G3DSA:3.40.1190.20 96 298 1.8E-45 T 23-04-2016 IPR029056 Ribokinase-like VV93_RS06460 22512e40c126a1021deed6740c35753a 434 Gene3D G3DSA:3.30.1110.10 45 95 1.8E-4 T 23-04-2016 VV93_RS11340 71a159741b60d79a8a044259e4ba2da2 204 PANTHER PTHR10204 4 204 5.9E-64 T 23-04-2016 VV93_RS11340 71a159741b60d79a8a044259e4ba2da2 204 Gene3D G3DSA:3.40.50.360 5 180 4.2E-50 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS11340 71a159741b60d79a8a044259e4ba2da2 204 PANTHER PTHR10204:SF42 4 204 5.9E-64 T 23-04-2016 VV93_RS11340 71a159741b60d79a8a044259e4ba2da2 204 Pfam PF02525 Flavodoxin-like fold 5 173 7.4E-46 T 23-04-2016 IPR003680 Flavodoxin-like fold VV93_RS11340 71a159741b60d79a8a044259e4ba2da2 204 SUPERFAMILY SSF52218 5 180 3.79E-51 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS01095 89712924eba7eabef9338ea92b564c74 399 Pfam PF12693 GspL periplasmic domain 241 398 1.2E-53 T 23-04-2016 IPR025691 GspL periplasmic domain VV93_RS01095 89712924eba7eabef9338ea92b564c74 399 Pfam PF05134 Type II secretion system (T2SS), protein L 5 236 1.1E-76 T 23-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain VV93_RS01095 89712924eba7eabef9338ea92b564c74 399 SUPERFAMILY SSF53067 146 234 4.92E-22 T 23-04-2016 VV93_RS01095 89712924eba7eabef9338ea92b564c74 399 SUPERFAMILY SSF53067 2 144 1.68E-43 T 23-04-2016 VV93_RS01095 89712924eba7eabef9338ea92b564c74 399 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 397 1.4E-97 T 23-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VV93_RS01095 89712924eba7eabef9338ea92b564c74 399 PIRSF PIRSF015761 19 398 4.0E-31 T 23-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VV93_RS12815 4fc3b47a01df3dcaa19e2da76346d70e 423 PANTHER PTHR10799 133 415 2.3E-27 T 23-04-2016 VV93_RS12815 4fc3b47a01df3dcaa19e2da76346d70e 423 Gene3D G3DSA:3.30.70.270 251 417 9.7E-45 T 23-04-2016 VV93_RS12815 4fc3b47a01df3dcaa19e2da76346d70e 423 SUPERFAMILY SSF55073 254 414 2.22E-38 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS12815 4fc3b47a01df3dcaa19e2da76346d70e 423 SMART SM00267 234 413 9.2E-38 T 23-04-2016 IPR000160 GGDEF domain VV93_RS12815 4fc3b47a01df3dcaa19e2da76346d70e 423 Pfam PF00672 HAMP domain 159 223 1.1E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS12815 4fc3b47a01df3dcaa19e2da76346d70e 423 PANTHER PTHR10799:SF774 133 415 2.3E-27 T 23-04-2016 VV93_RS12815 4fc3b47a01df3dcaa19e2da76346d70e 423 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 408 8.1E-37 T 23-04-2016 IPR000160 GGDEF domain VV93_RS12815 4fc3b47a01df3dcaa19e2da76346d70e 423 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 248 411 8.3E-35 T 23-04-2016 IPR000160 GGDEF domain VV93_RS00955 f4908b713d5da6ea60ec05544118c472 212 Gene3D G3DSA:3.40.50.150 62 103 2.1E-4 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00955 f4908b713d5da6ea60ec05544118c472 212 SUPERFAMILY SSF53335 47 198 1.37E-17 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00955 f4908b713d5da6ea60ec05544118c472 212 Gene3D G3DSA:3.40.50.150 104 198 9.5E-10 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00955 f4908b713d5da6ea60ec05544118c472 212 Pfam PF13489 Methyltransferase domain 61 192 5.5E-18 T 23-04-2016 VV93_RS02660 4ac92a307fdad0b365e073a99e7ab0c7 950 Gene3D G3DSA:3.30.460.10 641 813 5.3E-62 T 23-04-2016 VV93_RS02660 4ac92a307fdad0b365e073a99e7ab0c7 950 Gene3D G3DSA:3.30.460.10 115 288 1.9E-61 T 23-04-2016 VV93_RS02660 4ac92a307fdad0b365e073a99e7ab0c7 950 SUPERFAMILY SSF81593 818 945 1.49E-31 T 23-04-2016 VV93_RS02660 4ac92a307fdad0b365e073a99e7ab0c7 950 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 555 807 2.7E-100 T 23-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VV93_RS02660 4ac92a307fdad0b365e073a99e7ab0c7 950 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 279 3.1E-92 T 23-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VV93_RS02660 4ac92a307fdad0b365e073a99e7ab0c7 950 SUPERFAMILY SSF81593 290 439 4.55E-43 T 23-04-2016 VV93_RS02660 4ac92a307fdad0b365e073a99e7ab0c7 950 SUPERFAMILY SSF81301 527 817 4.9E-92 T 23-04-2016 VV93_RS02660 4ac92a307fdad0b365e073a99e7ab0c7 950 Pfam PF08335 GlnD PII-uridylyltransferase 828 914 6.9E-7 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VV93_RS02660 4ac92a307fdad0b365e073a99e7ab0c7 950 Pfam PF08335 GlnD PII-uridylyltransferase 300 438 4.0E-45 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VV93_RS02660 4ac92a307fdad0b365e073a99e7ab0c7 950 SUPERFAMILY SSF81301 24 289 5.32E-87 T 23-04-2016 VV93_RS02660 4ac92a307fdad0b365e073a99e7ab0c7 950 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 30 947 19.782 T 23-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 VV93_RS02660 4ac92a307fdad0b365e073a99e7ab0c7 950 PANTHER PTHR30621 7 944 0.0 T 23-04-2016 VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 SUPERFAMILY SSF46689 285 341 3.58E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 Gene3D G3DSA:3.40.50.300 3 176 1.7E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 339 8.5E-167 T 23-04-2016 IPR014317 Transcription activator PspF VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 SUPERFAMILY SSF52540 4 237 1.65E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 Gene3D G3DSA:1.10.10.60 228 251 1.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 Gene3D G3DSA:1.10.10.60 287 328 1.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 SMART SM00382 25 177 8.0E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 PRINTS PR00819 CbxX/CfqX superfamily signature 88 107 8.5E-5 T 23-04-2016 IPR000641 CbxX/CfqX GO:0005524 VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 PRINTS PR00819 CbxX/CfqX superfamily signature 1 7 8.5E-5 T 23-04-2016 IPR000641 CbxX/CfqX GO:0005524 VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 PRINTS PR00819 CbxX/CfqX superfamily signature 222 234 8.5E-5 T 23-04-2016 IPR000641 CbxX/CfqX GO:0005524 VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 PANTHER PTHR32071 1 342 5.2E-212 T 23-04-2016 VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 Pfam PF00158 Sigma-54 interaction domain 5 168 7.9E-58 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 Pfam PF02954 Bacterial regulatory protein, Fis family 305 333 1.7E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 Gene3D G3DSA:1.10.8.60 177 227 1.5E-21 T 23-04-2016 VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 PANTHER PTHR32071:SF38 1 342 5.2E-212 T 23-04-2016 VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 305 322 5.3E-6 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS06670 bd5f206e32d4f350ea25be46af70a59d 345 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 322 342 5.3E-6 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS04150 2173818cadc32d17080c3501b169e333 521 SUPERFAMILY SSF55073 366 518 4.08E-36 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS04150 2173818cadc32d17080c3501b169e333 521 Gene3D G3DSA:3.30.70.270 364 519 4.2E-40 T 23-04-2016 VV93_RS04150 2173818cadc32d17080c3501b169e333 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 518 6.2E-35 T 23-04-2016 IPR000160 GGDEF domain VV93_RS04150 2173818cadc32d17080c3501b169e333 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 516 1.7E-36 T 23-04-2016 IPR000160 GGDEF domain VV93_RS04150 2173818cadc32d17080c3501b169e333 521 SMART SM00267 351 521 2.7E-41 T 23-04-2016 IPR000160 GGDEF domain VV93_RS05835 4d7c07104bb3ef956e42cf330d3f52a0 475 Pfam PF00218 Indole-3-glycerol phosphate synthase 23 272 1.6E-96 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 VV93_RS05835 4d7c07104bb3ef956e42cf330d3f52a0 475 PANTHER PTHR22854 1 303 5.4E-137 T 23-04-2016 VV93_RS05835 4d7c07104bb3ef956e42cf330d3f52a0 475 SUPERFAMILY SSF51366 19 272 1.18E-79 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VV93_RS05835 4d7c07104bb3ef956e42cf330d3f52a0 475 Gene3D G3DSA:3.20.20.70 280 468 5.4E-63 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS05835 4d7c07104bb3ef956e42cf330d3f52a0 475 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 278 469 3.0E-54 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 VV93_RS05835 4d7c07104bb3ef956e42cf330d3f52a0 475 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 68 86 - T 23-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 VV93_RS05835 4d7c07104bb3ef956e42cf330d3f52a0 475 Gene3D G3DSA:3.20.20.70 19 279 3.1E-100 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS05835 4d7c07104bb3ef956e42cf330d3f52a0 475 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 21 275 34.971 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 VV93_RS05835 4d7c07104bb3ef956e42cf330d3f52a0 475 PANTHER PTHR22854:SF2 1 303 5.4E-137 T 23-04-2016 VV93_RS05835 4d7c07104bb3ef956e42cf330d3f52a0 475 SUPERFAMILY SSF51366 278 473 1.44E-56 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VV93_RS05835 4d7c07104bb3ef956e42cf330d3f52a0 475 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 276 475 30.322 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 VV93_RS04410 f45d835853d75283b4d4a76f0fee88cc 295 PANTHER PTHR20861 6 280 7.1E-98 T 23-04-2016 VV93_RS04410 f45d835853d75283b4d4a76f0fee88cc 295 SUPERFAMILY SSF54211 11 164 6.15E-45 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS04410 f45d835853d75283b4d4a76f0fee88cc 295 SUPERFAMILY SSF55060 167 282 1.34E-34 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain VV93_RS04410 f45d835853d75283b4d4a76f0fee88cc 295 PANTHER PTHR20861:SF2 6 280 7.1E-98 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS04410 f45d835853d75283b4d4a76f0fee88cc 295 Pfam PF00288 GHMP kinases N terminal domain 94 150 3.0E-7 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 VV93_RS04410 f45d835853d75283b4d4a76f0fee88cc 295 PIRSF PIRSF010376 9 285 6.3E-86 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS04410 f45d835853d75283b4d4a76f0fee88cc 295 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 11 284 4.6E-97 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS04410 f45d835853d75283b4d4a76f0fee88cc 295 Gene3D G3DSA:3.30.230.10 12 165 2.6E-52 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV93_RS04410 f45d835853d75283b4d4a76f0fee88cc 295 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 11 272 31.306 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS04410 f45d835853d75283b4d4a76f0fee88cc 295 Gene3D G3DSA:3.30.70.890 168 284 6.3E-42 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain VV93_RS04410 f45d835853d75283b4d4a76f0fee88cc 295 Pfam PF08544 GHMP kinases C terminal 211 264 3.9E-5 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain VV93_RS01245 e66de2756069916aee0a578a3868c4a0 277 Pfam PF00005 ABC transporter 32 181 2.7E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS01245 e66de2756069916aee0a578a3868c4a0 277 SUPERFAMILY SSF52540 6 254 9.11E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01245 e66de2756069916aee0a578a3868c4a0 277 PANTHER PTHR24220:SF336 7 267 8.8E-140 T 23-04-2016 VV93_RS01245 e66de2756069916aee0a578a3868c4a0 277 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS01245 e66de2756069916aee0a578a3868c4a0 277 SMART SM00382 40 232 9.4E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS01245 e66de2756069916aee0a578a3868c4a0 277 Gene3D G3DSA:3.40.50.300 4 256 1.9E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01245 e66de2756069916aee0a578a3868c4a0 277 PANTHER PTHR24220 7 267 8.8E-140 T 23-04-2016 VV93_RS01495 2bd40e6fdbdf82360f92989b35cf78a0 263 Gene3D G3DSA:3.90.550.10 6 127 4.1E-12 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS01495 2bd40e6fdbdf82360f92989b35cf78a0 263 PANTHER PTHR10859 7 136 1.7E-26 T 23-04-2016 VV93_RS01495 2bd40e6fdbdf82360f92989b35cf78a0 263 Pfam PF00535 Glycosyl transferase family 2 12 115 1.8E-13 T 23-04-2016 IPR001173 Glycosyltransferase 2-like VV93_RS01495 2bd40e6fdbdf82360f92989b35cf78a0 263 SUPERFAMILY SSF53448 6 147 7.29E-24 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS06945 62bfbde5213a394a37841b6b97bb1a8b 306 Pfam PF08668 HDOD domain 39 235 3.0E-38 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD VV93_RS06945 62bfbde5213a394a37841b6b97bb1a8b 306 PANTHER PTHR33525:SF2 14 305 8.7E-105 T 23-04-2016 VV93_RS06945 62bfbde5213a394a37841b6b97bb1a8b 306 SUPERFAMILY SSF109604 25 301 1.0E-43 T 23-04-2016 VV93_RS06945 62bfbde5213a394a37841b6b97bb1a8b 306 PANTHER PTHR33525 14 305 8.7E-105 T 23-04-2016 VV93_RS06945 62bfbde5213a394a37841b6b97bb1a8b 306 Gene3D G3DSA:1.10.3150.10 15 302 1.8E-57 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD VV93_RS11315 9893f94b78209468f7797bbb410d013a 191 PANTHER PTHR30390 2 191 8.7E-93 T 23-04-2016 VV93_RS11315 9893f94b78209468f7797bbb410d013a 191 SUPERFAMILY SSF53697 1 189 1.48E-52 T 23-04-2016 VV93_RS11315 9893f94b78209468f7797bbb410d013a 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 1.9E-82 T 23-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 VV93_RS11315 9893f94b78209468f7797bbb410d013a 191 Pfam PF13580 SIS domain 25 146 2.1E-30 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VV93_RS11315 9893f94b78209468f7797bbb410d013a 191 Gene3D G3DSA:3.40.50.10490 1 190 3.4E-64 T 23-04-2016 VV93_RS11315 9893f94b78209468f7797bbb410d013a 191 PANTHER PTHR30390:SF6 2 191 8.7E-93 T 23-04-2016 VV93_RS11315 9893f94b78209468f7797bbb410d013a 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.794 T 23-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 VV93_RS13730 6c98ebb047d0faecf14accb3d903cd87 153 Gene3D G3DSA:3.40.1550.10 1 153 4.9E-44 T 23-04-2016 IPR028976 CheC-like domain VV93_RS13730 6c98ebb047d0faecf14accb3d903cd87 153 PANTHER PTHR39452:SF1 1 153 1.4E-78 T 23-04-2016 VV93_RS13730 6c98ebb047d0faecf14accb3d903cd87 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 4.6E-22 T 23-04-2016 IPR028051 Chemotaxis phosphatase CheX-like domain KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- VV93_RS13730 6c98ebb047d0faecf14accb3d903cd87 153 PANTHER PTHR39452 1 153 1.4E-78 T 23-04-2016 VV93_RS13730 6c98ebb047d0faecf14accb3d903cd87 153 SUPERFAMILY SSF103039 1 153 1.03E-37 T 23-04-2016 IPR028976 CheC-like domain VV93_RS04605 8fcb54962b8f009770a13f95ee3430f3 306 Pfam PF10135 Rod binding protein 53 102 7.3E-14 T 23-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal VV93_RS04605 8fcb54962b8f009770a13f95ee3430f3 306 SMART SM00047 146 305 1.0E-50 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VV93_RS04605 8fcb54962b8f009770a13f95ee3430f3 306 Gene3D G3DSA:1.10.530.10 149 204 1.5E-4 T 23-04-2016 VV93_RS04605 8fcb54962b8f009770a13f95ee3430f3 306 PANTHER PTHR33308 11 305 2.9E-37 T 23-04-2016 VV93_RS04605 8fcb54962b8f009770a13f95ee3430f3 306 PANTHER PTHR33308:SF3 11 305 2.9E-37 T 23-04-2016 VV93_RS04605 8fcb54962b8f009770a13f95ee3430f3 306 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 303 3.0E-111 T 23-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- VV93_RS04605 8fcb54962b8f009770a13f95ee3430f3 306 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 167 303 1.8E-21 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VV93_RS04605 8fcb54962b8f009770a13f95ee3430f3 306 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 2.7E-28 T 23-04-2016 VV93_RS04605 8fcb54962b8f009770a13f95ee3430f3 306 PRINTS PR01002 Flagellar protein FlgJ signature 180 198 2.7E-28 T 23-04-2016 VV93_RS04605 8fcb54962b8f009770a13f95ee3430f3 306 PRINTS PR01002 Flagellar protein FlgJ signature 286 304 2.7E-28 T 23-04-2016 VV93_RS04605 8fcb54962b8f009770a13f95ee3430f3 306 PRINTS PR01002 Flagellar protein FlgJ signature 221 242 2.7E-28 T 23-04-2016 VV93_RS04605 8fcb54962b8f009770a13f95ee3430f3 306 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 2.7E-28 T 23-04-2016 VV93_RS04605 8fcb54962b8f009770a13f95ee3430f3 306 PRINTS PR01002 Flagellar protein FlgJ signature 243 264 2.7E-28 T 23-04-2016 VV93_RS04605 8fcb54962b8f009770a13f95ee3430f3 306 PRINTS PR01002 Flagellar protein FlgJ signature 156 179 2.7E-28 T 23-04-2016 VV93_RS11495 c52a8c2edcdaaebc4ad0736d887c439f 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 5.5E-58 T 23-04-2016 IPR020911 Uncharacterised protein family UPF0325 VV93_RS11495 c52a8c2edcdaaebc4ad0736d887c439f 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 32.09 T 23-04-2016 IPR020911 Uncharacterised protein family UPF0325 VV93_RS11495 c52a8c2edcdaaebc4ad0736d887c439f 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 5.0E-68 T 23-04-2016 IPR020911 Uncharacterised protein family UPF0325 VV93_RS03650 7da303fda1e91dd3faf8d81bee3d3f5f 443 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.618 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VV93_RS03650 7da303fda1e91dd3faf8d81bee3d3f5f 443 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 357 2.6E-134 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VV93_RS03650 7da303fda1e91dd3faf8d81bee3d3f5f 443 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 7.0E-30 T 23-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 VV93_RS03650 7da303fda1e91dd3faf8d81bee3d3f5f 443 Pfam PF02601 Exonuclease VII, large subunit 126 440 4.2E-101 T 23-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 VV93_RS03650 7da303fda1e91dd3faf8d81bee3d3f5f 443 PANTHER PTHR30008 2 442 2.1E-179 T 23-04-2016 VV93_RS03650 7da303fda1e91dd3faf8d81bee3d3f5f 443 PANTHER PTHR30008:SF0 2 442 2.1E-179 T 23-04-2016 VV93_RS14880 fc11e8b3f1aa5a849a0397ded69adaa6 291 Pfam PF05114 Protein of unknown function (DUF692) 10 274 1.0E-106 T 23-04-2016 IPR007801 Uncharacterised protein family UPF0276 VV93_RS14880 fc11e8b3f1aa5a849a0397ded69adaa6 291 PANTHER PTHR42194 4 266 3.5E-60 T 23-04-2016 VV93_RS14880 fc11e8b3f1aa5a849a0397ded69adaa6 291 Hamap MF_00697 UPF0276 protein . 10 282 45.677 T 23-04-2016 IPR007801 Uncharacterised protein family UPF0276 VV93_RS14880 fc11e8b3f1aa5a849a0397ded69adaa6 291 Gene3D G3DSA:3.20.20.150 8 277 2.1E-99 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VV93_RS14880 fc11e8b3f1aa5a849a0397ded69adaa6 291 PANTHER PTHR42194:SF1 4 266 3.5E-60 T 23-04-2016 VV93_RS14880 fc11e8b3f1aa5a849a0397ded69adaa6 291 SUPERFAMILY SSF51658 30 255 2.32E-6 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VV93_RS03340 eba81ec3e4d4ebc890cef21459ef0f3f 142 PANTHER PTHR38978 2 142 3.2E-46 T 23-04-2016 VV93_RS03340 eba81ec3e4d4ebc890cef21459ef0f3f 142 Pfam PF10980 Protein of unknown function (DUF2787) 18 140 2.2E-39 T 23-04-2016 IPR021248 Protein of unknown function DUF2787 VV93_RS03340 eba81ec3e4d4ebc890cef21459ef0f3f 142 PANTHER PTHR38978:SF2 2 142 3.2E-46 T 23-04-2016 VV93_RS06480 fc9ece3f56f81c8aaeff455cf8fe8e67 431 Pfam PF00815 Histidinol dehydrogenase 26 424 5.8E-171 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VV93_RS06480 fc9ece3f56f81c8aaeff455cf8fe8e67 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 2.9E-166 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VV93_RS06480 fc9ece3f56f81c8aaeff455cf8fe8e67 431 SUPERFAMILY SSF53720 3 424 1.49E-92 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VV93_RS06480 fc9ece3f56f81c8aaeff455cf8fe8e67 431 PANTHER PTHR21256 1 430 9.2E-293 T 23-04-2016 VV93_RS06480 fc9ece3f56f81c8aaeff455cf8fe8e67 431 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 1.0E-101 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VV93_RS06480 fc9ece3f56f81c8aaeff455cf8fe8e67 431 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 1.0E-101 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VV93_RS06480 fc9ece3f56f81c8aaeff455cf8fe8e67 431 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 1.0E-101 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VV93_RS06480 fc9ece3f56f81c8aaeff455cf8fe8e67 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.0E-101 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VV93_RS06480 fc9ece3f56f81c8aaeff455cf8fe8e67 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 1.0E-101 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VV93_RS06480 fc9ece3f56f81c8aaeff455cf8fe8e67 431 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 1.0E-101 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VV93_RS06480 fc9ece3f56f81c8aaeff455cf8fe8e67 431 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 1.0E-101 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VV93_RS06480 fc9ece3f56f81c8aaeff455cf8fe8e67 431 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 1.0E-101 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VV93_RS06480 fc9ece3f56f81c8aaeff455cf8fe8e67 431 Gene3D G3DSA:3.40.50.620 236 304 2.5E-4 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS06480 fc9ece3f56f81c8aaeff455cf8fe8e67 431 PIRSF PIRSF000099 1 427 3.0E-169 T 23-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VV93_RS06480 fc9ece3f56f81c8aaeff455cf8fe8e67 431 PANTHER PTHR21256:SF14 1 430 9.2E-293 T 23-04-2016 VV93_RS06480 fc9ece3f56f81c8aaeff455cf8fe8e67 431 Gene3D G3DSA:3.40.50.1980 28 235 5.5E-82 T 23-04-2016 VV93_RS06480 fc9ece3f56f81c8aaeff455cf8fe8e67 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.345 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VV93_RS06480 fc9ece3f56f81c8aaeff455cf8fe8e67 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 23-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VV93_RS06820 862496b0e130b829a1fa3ff3b6c5b950 449 Gene3D G3DSA:3.30.565.10 307 446 3.1E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS06820 862496b0e130b829a1fa3ff3b6c5b950 449 SMART SM00387 340 447 4.6E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS06820 862496b0e130b829a1fa3ff3b6c5b950 449 SUPERFAMILY SSF55874 307 443 1.23E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS06820 862496b0e130b829a1fa3ff3b6c5b950 449 PANTHER PTHR24423:SF496 181 443 7.2E-47 T 23-04-2016 VV93_RS06820 862496b0e130b829a1fa3ff3b6c5b950 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 445 9.6E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS06820 862496b0e130b829a1fa3ff3b6c5b950 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 1.2E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS06820 862496b0e130b829a1fa3ff3b6c5b950 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 1.2E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS06820 862496b0e130b829a1fa3ff3b6c5b950 449 PANTHER PTHR24423 181 443 7.2E-47 T 23-04-2016 VV93_RS06495 89a104763fec5c31109c20271decb40f 204 Pfam PF00117 Glutamine amidotransferase class-I 8 202 6.7E-18 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VV93_RS06495 89a104763fec5c31109c20271decb40f 204 PIRSF PIRSF000495 4 204 9.7E-65 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 VV93_RS06495 89a104763fec5c31109c20271decb40f 204 SUPERFAMILY SSF52317 5 203 8.56E-53 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS06495 89a104763fec5c31109c20271decb40f 204 PANTHER PTHR21235 6 203 5.9E-82 T 23-04-2016 VV93_RS06495 89a104763fec5c31109c20271decb40f 204 Gene3D G3DSA:3.40.50.880 3 204 6.5E-70 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS06495 89a104763fec5c31109c20271decb40f 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 203 7.2E-69 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 VV93_RS06495 89a104763fec5c31109c20271decb40f 204 PANTHER PTHR21235:SF1 6 203 5.9E-82 T 23-04-2016 VV93_RS06495 89a104763fec5c31109c20271decb40f 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 204 33.561 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 VV93_RS10915 b68fba2e8c3c6483c7f0fbf63aa4b230 164 SMART SM00260 16 153 9.2E-50 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VV93_RS10915 b68fba2e8c3c6483c7f0fbf63aa4b230 164 Gene3D G3DSA:2.40.50.180 59 94 5.1E-9 T 23-04-2016 VV93_RS10915 b68fba2e8c3c6483c7f0fbf63aa4b230 164 Pfam PF01584 CheW-like domain 20 156 2.5E-40 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VV93_RS10915 b68fba2e8c3c6483c7f0fbf63aa4b230 164 PANTHER PTHR22617:SF26 15 164 6.8E-111 T 23-04-2016 VV93_RS10915 b68fba2e8c3c6483c7f0fbf63aa4b230 164 Gene3D G3DSA:2.30.30.40 95 146 1.3E-8 T 23-04-2016 VV93_RS10915 b68fba2e8c3c6483c7f0fbf63aa4b230 164 SUPERFAMILY SSF50341 14 158 4.97E-42 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VV93_RS10915 b68fba2e8c3c6483c7f0fbf63aa4b230 164 PANTHER PTHR22617 15 164 6.8E-111 T 23-04-2016 VV93_RS09240 75843a70b64abd0f5f3206aaf8c59120 235 Gene3D G3DSA:3.40.190.10 25 97 5.9E-5 T 23-04-2016 VV93_RS09240 75843a70b64abd0f5f3206aaf8c59120 235 Gene3D G3DSA:3.40.190.10 193 230 5.9E-5 T 23-04-2016 VV93_RS09240 75843a70b64abd0f5f3206aaf8c59120 235 SUPERFAMILY SSF53850 16 230 2.72E-28 T 23-04-2016 VV93_RS09240 75843a70b64abd0f5f3206aaf8c59120 235 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 229 1.4E-12 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV93_RS09240 75843a70b64abd0f5f3206aaf8c59120 235 PANTHER PTHR35936 7 229 1.1E-36 T 23-04-2016 VV93_RS09240 75843a70b64abd0f5f3206aaf8c59120 235 PANTHER PTHR35936:SF3 7 229 1.1E-36 T 23-04-2016 VV93_RS03325 5d778f7e544b18d69dd6d7df02113fed 414 SUPERFAMILY SSF56349 113 389 8.24E-47 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS03325 5d778f7e544b18d69dd6d7df02113fed 414 Pfam PF13356 Domain of unknown function (DUF4102) 10 105 1.1E-15 T 23-04-2016 IPR025166 Domain of unknown function DUF4102 VV93_RS03325 5d778f7e544b18d69dd6d7df02113fed 414 PANTHER PTHR30349 149 413 1.4E-32 T 23-04-2016 VV93_RS03325 5d778f7e544b18d69dd6d7df02113fed 414 Pfam PF00589 Phage integrase family 221 385 8.5E-30 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS03325 5d778f7e544b18d69dd6d7df02113fed 414 PANTHER PTHR30349:SF20 149 413 1.4E-32 T 23-04-2016 VV93_RS03325 5d778f7e544b18d69dd6d7df02113fed 414 Gene3D G3DSA:1.10.443.10 218 398 6.2E-38 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS08055 e66b95e06d17b26a285e7084d984eaf6 440 Pfam PF13006 Insertion element 4 transposase N-terminal 18 109 1.7E-29 T 23-04-2016 IPR024473 Transposase, IS4, N-terminal VV93_RS08055 e66b95e06d17b26a285e7084d984eaf6 440 SUPERFAMILY SSF53098 100 357 2.12E-28 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08055 e66b95e06d17b26a285e7084d984eaf6 440 Pfam PF01609 Transposase DDE domain 128 352 3.1E-24 T 23-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VV93_RS08055 e66b95e06d17b26a285e7084d984eaf6 440 PANTHER PTHR37529 2 436 8.2E-44 T 23-04-2016 VV93_RS13365 e66b95e06d17b26a285e7084d984eaf6 440 Pfam PF13006 Insertion element 4 transposase N-terminal 18 109 1.7E-29 T 23-04-2016 IPR024473 Transposase, IS4, N-terminal VV93_RS13365 e66b95e06d17b26a285e7084d984eaf6 440 SUPERFAMILY SSF53098 100 357 2.12E-28 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS13365 e66b95e06d17b26a285e7084d984eaf6 440 Pfam PF01609 Transposase DDE domain 128 352 3.1E-24 T 23-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VV93_RS13365 e66b95e06d17b26a285e7084d984eaf6 440 PANTHER PTHR37529 2 436 8.2E-44 T 23-04-2016 VV93_RS12550 0149c7ff9f7fbe23de64776ddfd99b7b 295 SUPERFAMILY SSF54675 14 128 2.2E-33 T 23-04-2016 VV93_RS12550 0149c7ff9f7fbe23de64776ddfd99b7b 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 1.2E-96 T 23-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 VV93_RS12550 0149c7ff9f7fbe23de64776ddfd99b7b 295 PIRSF PIRSF006250 16 295 1.7E-103 T 23-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD VV93_RS12550 0149c7ff9f7fbe23de64776ddfd99b7b 295 SUPERFAMILY SSF51690 130 294 2.67E-60 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 VV93_RS12550 0149c7ff9f7fbe23de64776ddfd99b7b 295 Gene3D G3DSA:3.20.20.70 150 283 2.9E-60 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS12550 0149c7ff9f7fbe23de64776ddfd99b7b 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 2.8E-60 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 VV93_RS12550 0149c7ff9f7fbe23de64776ddfd99b7b 295 PANTHER PTHR32179 1 294 1.7E-131 T 23-04-2016 VV93_RS12550 0149c7ff9f7fbe23de64776ddfd99b7b 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 42 127 1.8E-27 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 VV93_RS12550 0149c7ff9f7fbe23de64776ddfd99b7b 295 Gene3D G3DSA:3.90.1170.20 16 149 1.0E-51 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 VV93_RS02470 d2144ee88fcea13135da33c8c951d352 295 TIGRFAM TIGR02565 cas_Csy2: CRISPR type I-F/YPEST-associated protein Csy2 4 286 4.6E-72 T 23-04-2016 IPR013398 CRISPR-associated protein Csy2 VV93_RS02470 d2144ee88fcea13135da33c8c951d352 295 Pfam PF09614 CRISPR-associated protein (Cas_Csy2) 4 285 9.6E-108 T 23-04-2016 IPR013398 CRISPR-associated protein Csy2 VV93_RS08290 417409c42d2e74a343d580ba2d0cbe6a 283 PANTHER PTHR32552:SF34 3 281 1.2E-65 T 23-04-2016 VV93_RS08290 417409c42d2e74a343d580ba2d0cbe6a 283 SUPERFAMILY SSF53098 117 281 3.79E-40 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08290 417409c42d2e74a343d580ba2d0cbe6a 283 Gene3D G3DSA:3.30.420.10 119 277 1.4E-34 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08290 417409c42d2e74a343d580ba2d0cbe6a 283 PANTHER PTHR32552 3 281 1.2E-65 T 23-04-2016 VV93_RS08290 417409c42d2e74a343d580ba2d0cbe6a 283 Pfam PF00665 Integrase core domain 125 237 1.1E-28 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VV93_RS03055 48283f596cf2afb44ad34c987e8deb63 305 Gene3D G3DSA:1.10.150.130 14 106 1.7E-27 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal VV93_RS03055 48283f596cf2afb44ad34c987e8deb63 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 305 60.974 T 23-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VV93_RS03055 48283f596cf2afb44ad34c987e8deb63 305 Gene3D G3DSA:1.10.443.10 120 297 2.0E-59 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS03055 48283f596cf2afb44ad34c987e8deb63 305 SUPERFAMILY SSF47823 11 107 2.55E-34 T 23-04-2016 IPR010998 Integrase, Lambda-type, N-terminal VV93_RS03055 48283f596cf2afb44ad34c987e8deb63 305 SUPERFAMILY SSF56349 113 303 1.85E-57 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS03055 48283f596cf2afb44ad34c987e8deb63 305 PANTHER PTHR30349 14 305 2.2E-121 T 23-04-2016 VV93_RS03055 48283f596cf2afb44ad34c987e8deb63 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 97 3.3E-19 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VV93_RS03055 48283f596cf2afb44ad34c987e8deb63 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 11 305 30.293 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD VV93_RS03055 48283f596cf2afb44ad34c987e8deb63 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 16 305 5.3E-116 T 23-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VV93_RS03055 48283f596cf2afb44ad34c987e8deb63 305 PANTHER PTHR30349:SF5 14 305 2.2E-121 T 23-04-2016 VV93_RS03055 48283f596cf2afb44ad34c987e8deb63 305 Pfam PF00589 Phage integrase family 120 291 6.0E-52 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS07840 76c1f3ecc4b15cabc3f25107f910ce8d 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 123 4.0E-67 T 23-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VV93_RS07840 76c1f3ecc4b15cabc3f25107f910ce8d 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 28.988 T 23-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VV93_RS07840 76c1f3ecc4b15cabc3f25107f910ce8d 149 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 1 147 3.4E-68 T 23-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VV93_RS10940 3c0e441507c605553ba5910991cca358 246 SUPERFAMILY SSF75708 27 245 1.7E-65 T 23-04-2016 VV93_RS10940 3c0e441507c605553ba5910991cca358 246 PANTHER PTHR22617 66 246 3.9E-73 T 23-04-2016 VV93_RS10940 3c0e441507c605553ba5910991cca358 246 PIRSF PIRSF002884 13 246 2.0E-95 T 23-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- VV93_RS10940 3c0e441507c605553ba5910991cca358 246 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 246 4.0E-75 T 23-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- VV93_RS10940 3c0e441507c605553ba5910991cca358 246 Gene3D G3DSA:1.10.287.500 58 189 1.2E-50 T 23-04-2016 VV93_RS10940 3c0e441507c605553ba5910991cca358 246 PANTHER PTHR22617:SF35 66 246 3.9E-73 T 23-04-2016 VV93_RS05255 5f8a847fdabff315fe4f29bd1049e1b0 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.3E-54 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VV93_RS05255 5f8a847fdabff315fe4f29bd1049e1b0 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.3E-54 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VV93_RS05255 5f8a847fdabff315fe4f29bd1049e1b0 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.3E-54 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VV93_RS05255 5f8a847fdabff315fe4f29bd1049e1b0 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.3E-54 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VV93_RS05255 5f8a847fdabff315fe4f29bd1049e1b0 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.3E-54 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VV93_RS05255 5f8a847fdabff315fe4f29bd1049e1b0 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 2.1E-107 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VV93_RS05255 5f8a847fdabff315fe4f29bd1049e1b0 208 SUPERFAMILY SSF52096 23 207 1.24E-75 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS05255 5f8a847fdabff315fe4f29bd1049e1b0 208 Pfam PF00574 Clp protease 25 205 8.3E-90 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VV93_RS05255 5f8a847fdabff315fe4f29bd1049e1b0 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 23-04-2016 IPR033135 ClpP, histidine active site VV93_RS05255 5f8a847fdabff315fe4f29bd1049e1b0 208 PANTHER PTHR10381:SF22 12 208 9.0E-142 T 23-04-2016 VV93_RS05255 5f8a847fdabff315fe4f29bd1049e1b0 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.494 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VV93_RS05255 5f8a847fdabff315fe4f29bd1049e1b0 208 PANTHER PTHR10381 12 208 9.0E-142 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VV93_RS05255 5f8a847fdabff315fe4f29bd1049e1b0 208 Gene3D G3DSA:3.90.226.10 16 205 2.4E-93 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS05255 5f8a847fdabff315fe4f29bd1049e1b0 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 23-04-2016 IPR018215 ClpP, Ser active site VV93_RS04525 c42908de7e3f215c614c72fa742bd978 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 375 1.3E-27 T 23-04-2016 IPR032388 Flagellar assembly protein T, C-terminal VV93_RS04525 c42908de7e3f215c614c72fa742bd978 377 Pfam PF16539 Flagellar assembly protein T, middle domain 115 256 1.8E-43 T 23-04-2016 IPR032386 Flagellar assembly protein T, middle domain VV93_RS04525 c42908de7e3f215c614c72fa742bd978 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 3.7E-26 T 23-04-2016 IPR032370 Flagellar assembly protein T, N-terminal VV93_RS11400 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.0E-48 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VV93_RS11400 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.0E-48 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VV93_RS11400 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.0E-48 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VV93_RS11400 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.0E-48 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VV93_RS11400 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.0E-48 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VV93_RS11400 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.0E-48 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VV93_RS11400 8d437094930fbca336600d3432fa0ca5 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 6.3E-64 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VV93_RS11400 8d437094930fbca336600d3432fa0ca5 319 SUPERFAMILY SSF52096 5 318 3.83E-104 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS11400 8d437094930fbca336600d3432fa0ca5 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.1E-163 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VV93_RS11400 8d437094930fbca336600d3432fa0ca5 319 PANTHER PTHR22855 1 317 9.1E-128 T 23-04-2016 VV93_RS11400 8d437094930fbca336600d3432fa0ca5 319 Gene3D G3DSA:3.90.226.10 57 274 1.1E-49 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS11400 8d437094930fbca336600d3432fa0ca5 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.427 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VV93_RS07180 9399bbbb32a728738b033daf389d2197 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 1.3E-134 T 23-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VV93_RS07180 9399bbbb32a728738b033daf389d2197 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 275 5.3E-15 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV93_RS07180 9399bbbb32a728738b033daf389d2197 357 PANTHER PTHR11959 1 355 1.8E-141 T 23-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VV93_RS07180 9399bbbb32a728738b033daf389d2197 357 SUPERFAMILY SSF54593 5 341 5.15E-81 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS07180 9399bbbb32a728738b033daf389d2197 357 Gene3D G3DSA:3.10.180.10 159 354 5.5E-74 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS07180 9399bbbb32a728738b033daf389d2197 357 PIRSF PIRSF009283 1 355 2.9E-127 T 23-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VV93_RS07180 9399bbbb32a728738b033daf389d2197 357 Gene3D G3DSA:3.10.180.10 6 146 1.3E-45 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS07180 9399bbbb32a728738b033daf389d2197 357 PANTHER PTHR11959:SF1 1 355 1.8E-141 T 23-04-2016 VV93_RS07180 9399bbbb32a728738b033daf389d2197 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 8.2E-58 T 23-04-2016 VV93_RS13165 4e5ea4f5c8b7fd16473e3e5457826d32 203 SUPERFAMILY SSF58104 26 147 1.83E-5 T 23-04-2016 VV93_RS13165 4e5ea4f5c8b7fd16473e3e5457826d32 203 Gene3D G3DSA:1.10.287.950 26 140 1.8E-4 T 23-04-2016 VV93_RS11880 36f30fe4a1e3b3cc1dbf24e01162ec80 350 SUPERFAMILY SSF54197 6 179 6.81E-73 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 VV93_RS11880 36f30fe4a1e3b3cc1dbf24e01162ec80 350 PANTHER PTHR11943:SF2 1 349 6.0E-213 T 23-04-2016 VV93_RS11880 36f30fe4a1e3b3cc1dbf24e01162ec80 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 23-04-2016 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11880 36f30fe4a1e3b3cc1dbf24e01162ec80 350 Gene3D G3DSA:3.30.428.10 46 177 4.6E-57 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 VV93_RS11880 36f30fe4a1e3b3cc1dbf24e01162ec80 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 349 5.5E-186 T 23-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11880 36f30fe4a1e3b3cc1dbf24e01162ec80 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 2.4E-67 T 23-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11880 36f30fe4a1e3b3cc1dbf24e01162ec80 350 PANTHER PTHR11943 1 349 6.0E-213 T 23-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11880 36f30fe4a1e3b3cc1dbf24e01162ec80 350 SUPERFAMILY SSF54197 181 348 3.06E-55 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 VV93_RS11880 36f30fe4a1e3b3cc1dbf24e01162ec80 350 Gene3D G3DSA:3.30.428.10 178 349 9.5E-76 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 VV93_RS11880 36f30fe4a1e3b3cc1dbf24e01162ec80 350 PIRSF PIRSF000808 2 345 1.9E-124 T 23-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS11880 36f30fe4a1e3b3cc1dbf24e01162ec80 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 349 2.3E-65 T 23-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 SMART SM00020 20 327 5.6E-25 T 23-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 Pfam PF00089 Trypsin 28 327 5.2E-27 T 23-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 391 412 9.5E-5 T 23-04-2016 IPR020008 GlyGly-CTERM domain VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 Gene3D G3DSA:2.40.10.10 148 332 1.0E-20 T 23-04-2016 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 PANTHER PTHR24256 175 239 2.0E-30 T 23-04-2016 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 PANTHER PTHR24256 256 335 2.0E-30 T 23-04-2016 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 PANTHER PTHR24256 83 122 2.0E-30 T 23-04-2016 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 PANTHER PTHR24256 138 152 2.0E-30 T 23-04-2016 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 PANTHER PTHR24256 46 63 2.0E-30 T 23-04-2016 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 47 62 3.3E-14 T 23-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 272 284 3.3E-14 T 23-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 139 153 3.3E-14 T 23-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 273 284 - T 23-04-2016 IPR033116 Serine proteases, trypsin family, serine active site VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 Gene3D G3DSA:2.40.10.10 42 147 9.6E-19 T 23-04-2016 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 57 62 - T 23-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 PANTHER PTHR24256:SF143 175 239 2.0E-30 T 23-04-2016 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 PANTHER PTHR24256:SF143 256 335 2.0E-30 T 23-04-2016 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 PANTHER PTHR24256:SF143 83 122 2.0E-30 T 23-04-2016 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 PANTHER PTHR24256:SF143 138 152 2.0E-30 T 23-04-2016 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 PANTHER PTHR24256:SF143 46 63 2.0E-30 T 23-04-2016 VV93_RS07290 8b83348b9e7b8af1fe37a5976c790661 415 SUPERFAMILY SSF50494 10 332 1.31E-41 T 23-04-2016 IPR009003 Peptidase S1, PA clan VV93_RS06620 209d10ca4e1169d7357f68bdb2561b5f 579 Gene3D G3DSA:3.20.20.70 188 490 1.4E-50 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS06620 209d10ca4e1169d7357f68bdb2561b5f 579 PANTHER PTHR22762 199 351 1.3E-20 T 23-04-2016 VV93_RS06620 209d10ca4e1169d7357f68bdb2561b5f 579 Pfam PF02065 Melibiase 169 352 9.1E-17 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VV93_RS06620 209d10ca4e1169d7357f68bdb2561b5f 579 SUPERFAMILY SSF51445 193 531 4.22E-76 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily VV93_RS03620 cf62bf01b1363bf84f4247440a383488 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 7.3E-53 T 23-04-2016 IPR018704 Tetratricopeptide repeat-like domain VV93_RS03620 cf62bf01b1363bf84f4247440a383488 204 Gene3D G3DSA:1.25.40.10 92 171 3.6E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS03620 cf62bf01b1363bf84f4247440a383488 204 PIRSF PIRSF006170 1 204 3.6E-52 T 23-04-2016 IPR026039 Uncharacterised protein family UPF0070 VV93_RS03620 cf62bf01b1363bf84f4247440a383488 204 PANTHER PTHR38035 2 204 2.0E-74 T 23-04-2016 VV93_RS09620 aad4531297b77dc4f8a5a8b41c68f313 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 37.537 T 23-04-2016 IPR007334 Uncharacterised protein family UPF0208 VV93_RS09620 aad4531297b77dc4f8a5a8b41c68f313 150 Pfam PF04217 Protein of unknown function, DUF412 9 146 1.1E-59 T 23-04-2016 IPR007334 Uncharacterised protein family UPF0208 VV93_RS11215 7b8bff485fe6da0cdfb51f2262aee5c1 124 Pfam PF09722 Protein of unknown function (DUF2384) 72 121 7.2E-10 T 23-04-2016 IPR024467 Domain of unknown function DUF2384 VV93_RS12945 582aa16b47be6f939fdf0a9ef59f3c7b 409 SUPERFAMILY SSF55021 335 408 8.02E-18 T 23-04-2016 VV93_RS12945 582aa16b47be6f939fdf0a9ef59f3c7b 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VV93_RS12945 582aa16b47be6f939fdf0a9ef59f3c7b 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 9.0E-53 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VV93_RS12945 582aa16b47be6f939fdf0a9ef59f3c7b 409 PANTHER PTHR10996:SF18 1 369 1.6E-243 T 23-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 VV93_RS12945 582aa16b47be6f939fdf0a9ef59f3c7b 409 SUPERFAMILY SSF52283 7 136 9.99E-50 T 23-04-2016 VV93_RS12945 582aa16b47be6f939fdf0a9ef59f3c7b 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 3.5E-39 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 VV93_RS12945 582aa16b47be6f939fdf0a9ef59f3c7b 409 Gene3D G3DSA:3.40.50.720 120 297 2.4E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS12945 582aa16b47be6f939fdf0a9ef59f3c7b 409 Gene3D G3DSA:3.30.70.260 324 408 2.5E-30 T 23-04-2016 VV93_RS12945 582aa16b47be6f939fdf0a9ef59f3c7b 409 PANTHER PTHR10996 1 369 1.6E-243 T 23-04-2016 VV93_RS12945 582aa16b47be6f939fdf0a9ef59f3c7b 409 SUPERFAMILY SSF51735 108 295 7.9E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS12945 582aa16b47be6f939fdf0a9ef59f3c7b 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VV93_RS12945 582aa16b47be6f939fdf0a9ef59f3c7b 409 Gene3D G3DSA:3.40.50.720 8 119 2.6E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS12945 582aa16b47be6f939fdf0a9ef59f3c7b 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VV93_RS12445 229049f66d6b1d63e4c154b51ea0f9c8 779 SUPERFAMILY SSF52151 45 118 7.06E-59 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VV93_RS12445 229049f66d6b1d63e4c154b51ea0f9c8 779 SUPERFAMILY SSF52151 148 334 7.06E-59 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VV93_RS12445 229049f66d6b1d63e4c154b51ea0f9c8 779 Pfam PF07244 Surface antigen variable number repeat 362 432 5.2E-6 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 VV93_RS12445 229049f66d6b1d63e4c154b51ea0f9c8 779 Pfam PF01734 Patatin-like phospholipase 52 242 5.5E-30 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 VV93_RS12445 229049f66d6b1d63e4c154b51ea0f9c8 779 Pfam PF01103 Surface antigen 470 778 5.7E-5 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 VV93_RS12445 229049f66d6b1d63e4c154b51ea0f9c8 779 PANTHER PTHR14226:SF37 153 476 3.1E-95 T 23-04-2016 VV93_RS12445 229049f66d6b1d63e4c154b51ea0f9c8 779 PANTHER PTHR14226:SF37 45 137 3.1E-95 T 23-04-2016 VV93_RS12445 229049f66d6b1d63e4c154b51ea0f9c8 779 Gene3D G3DSA:3.40.1090.10 52 245 6.7E-14 T 23-04-2016 VV93_RS12445 229049f66d6b1d63e4c154b51ea0f9c8 779 PANTHER PTHR14226 153 476 3.1E-95 T 23-04-2016 VV93_RS12445 229049f66d6b1d63e4c154b51ea0f9c8 779 PANTHER PTHR14226 45 137 3.1E-95 T 23-04-2016 VV93_RS04790 3c203cd53d734a85e7504b184c1dc7a0 530 SUPERFAMILY SSF51735 387 518 1.36E-15 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS04790 3c203cd53d734a85e7504b184c1dc7a0 530 Pfam PF00999 Sodium/hydrogen exchanger family 3 350 2.4E-35 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VV93_RS04790 3c203cd53d734a85e7504b184c1dc7a0 530 Gene3D G3DSA:3.40.50.720 380 525 2.5E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS04790 3c203cd53d734a85e7504b184c1dc7a0 530 PANTHER PTHR16254 3 525 9.2E-156 T 23-04-2016 VV93_RS04790 3c203cd53d734a85e7504b184c1dc7a0 530 Pfam PF02254 TrkA-N domain 388 504 3.8E-19 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VV93_RS04790 3c203cd53d734a85e7504b184c1dc7a0 530 PANTHER PTHR16254:SF14 3 525 9.2E-156 T 23-04-2016 VV93_RS09235 55d893451bcf2a664db1a921fe970997 304 SUPERFAMILY SSF111331 5 303 1.61E-54 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain VV93_RS09235 55d893451bcf2a664db1a921fe970997 304 PANTHER PTHR12358 3 304 8.6E-42 T 23-04-2016 VV93_RS09235 55d893451bcf2a664db1a921fe970997 304 PANTHER PTHR12358:SF43 3 304 8.6E-42 T 23-04-2016 VV93_RS09235 55d893451bcf2a664db1a921fe970997 304 Pfam PF00781 Diacylglycerol kinase catalytic domain 5 127 6.8E-24 T 23-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 VV93_RS09235 55d893451bcf2a664db1a921fe970997 304 SMART SM00046 5 135 3.0E-5 T 23-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 VV93_RS10390 3023475ab269b3e9ef5b9fc9de2aadc9 626 SMART SM00283 364 618 1.5E-53 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS10390 3023475ab269b3e9ef5b9fc9de2aadc9 626 PANTHER PTHR32089 148 626 1.3E-127 T 23-04-2016 VV93_RS10390 3023475ab269b3e9ef5b9fc9de2aadc9 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 426 624 1.6E-42 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS10390 3023475ab269b3e9ef5b9fc9de2aadc9 626 PANTHER PTHR32089:SF62 148 626 1.3E-127 T 23-04-2016 VV93_RS10390 3023475ab269b3e9ef5b9fc9de2aadc9 626 SMART SM00304 295 349 5.6E-4 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS10390 3023475ab269b3e9ef5b9fc9de2aadc9 626 SMART SM00304 566 622 110.0 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS10390 3023475ab269b3e9ef5b9fc9de2aadc9 626 Pfam PF00672 HAMP domain 276 344 6.9E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS10390 3023475ab269b3e9ef5b9fc9de2aadc9 626 SUPERFAMILY SSF58104 315 625 5.89E-63 T 23-04-2016 VV93_RS10390 3023475ab269b3e9ef5b9fc9de2aadc9 626 Gene3D G3DSA:1.10.287.950 381 595 6.4E-49 T 23-04-2016 VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 PANTHER PTHR11624 24 218 0.0 T 23-04-2016 IPR033247 Transketolase family VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 PANTHER PTHR11624 241 621 0.0 T 23-04-2016 IPR033247 Transketolase family VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 SUPERFAMILY SSF52518 317 504 4.79E-58 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 Gene3D G3DSA:3.40.50.920 496 619 7.9E-39 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 Gene3D G3DSA:3.40.50.970 335 495 7.1E-36 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 3.2E-120 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 Gene3D G3DSA:3.40.50.970 26 201 2.7E-75 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 Gene3D G3DSA:3.40.50.970 242 334 2.7E-75 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 SUPERFAMILY SSF52922 492 619 1.02E-33 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 SUPERFAMILY SSF52518 243 381 3.69E-76 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 SUPERFAMILY SSF52518 9 199 3.69E-76 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 1.1E-28 T 23-04-2016 IPR033248 Transketolase, C-terminal domain VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 SMART SM00861 319 483 5.5E-64 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 Pfam PF02779 Transketolase, pyrimidine binding domain 319 479 4.8E-37 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 0.0 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 PANTHER PTHR11624:SF20 24 218 0.0 T 23-04-2016 VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 PANTHER PTHR11624:SF20 241 621 0.0 T 23-04-2016 VV93_RS04085 bd22b890b14486b78a01d85e5ff6ad0e 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 46.131 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VV93_RS11015 4fc41088834a753363657d90fa8c5533 143 PANTHER PTHR38786 1 143 4.6E-35 T 23-04-2016 VV93_RS11015 4fc41088834a753363657d90fa8c5533 143 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 3.6E-34 T 23-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VV93_RS11015 4fc41088834a753363657d90fa8c5533 143 Pfam PF02050 Flagellar FliJ protein 18 140 2.6E-30 T 23-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VV93_RS04170 6c6b727d73bdfe022a6f7b3b4c37e2a1 258 PIRSF PIRSF029037 1 258 4.5E-115 T 23-04-2016 IPR016908 Uncharacterised conserved protein UCP029037 VV93_RS04170 6c6b727d73bdfe022a6f7b3b4c37e2a1 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 2.0E-114 T 23-04-2016 IPR016908 Uncharacterised conserved protein UCP029037 VV93_RS03090 8cf9448c25b01ac24c42d64fdeb8967d 344 SUPERFAMILY SSF51430 1 337 4.71E-107 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain VV93_RS03090 8cf9448c25b01ac24c42d64fdeb8967d 344 Pfam PF00248 Aldo/keto reductase family 15 335 6.3E-75 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain VV93_RS03090 8cf9448c25b01ac24c42d64fdeb8967d 344 PANTHER PTHR11732 1 137 5.1E-202 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta VV93_RS03090 8cf9448c25b01ac24c42d64fdeb8967d 344 PANTHER PTHR11732 155 344 5.1E-202 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta VV93_RS03090 8cf9448c25b01ac24c42d64fdeb8967d 344 PANTHER PTHR11732:SF112 1 137 5.1E-202 T 23-04-2016 VV93_RS03090 8cf9448c25b01ac24c42d64fdeb8967d 344 PANTHER PTHR11732:SF112 155 344 5.1E-202 T 23-04-2016 VV93_RS03090 8cf9448c25b01ac24c42d64fdeb8967d 344 Gene3D G3DSA:3.20.20.100 1 337 1.1E-105 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain VV93_RS03195 63219f1a8bf43d36efdea6ead4f0a678 494 PANTHER PTHR30252 1 470 3.4E-169 T 23-04-2016 VV93_RS03195 63219f1a8bf43d36efdea6ead4f0a678 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 327 437 2.7E-21 T 23-04-2016 IPR025299 CstA, C-terminal domain VV93_RS03195 63219f1a8bf43d36efdea6ead4f0a678 494 Pfam PF02554 Carbon starvation protein CstA 4 144 2.4E-33 T 23-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VV93_RS03195 63219f1a8bf43d36efdea6ead4f0a678 494 Pfam PF02554 Carbon starvation protein CstA 148 293 2.7E-20 T 23-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VV93_RS03195 63219f1a8bf43d36efdea6ead4f0a678 494 PANTHER PTHR30252:SF0 1 470 3.4E-169 T 23-04-2016 VV93_RS01160 13caa315a99dbfb1cb7ae2b65a48031b 467 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 19 446 8.2E-127 T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VV93_RS01160 13caa315a99dbfb1cb7ae2b65a48031b 467 Pfam PF00860 Permease family 24 416 3.0E-98 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VV93_RS01160 13caa315a99dbfb1cb7ae2b65a48031b 467 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 364 384 - T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VV93_RS01160 13caa315a99dbfb1cb7ae2b65a48031b 467 PANTHER PTHR11119:SF44 7 457 1.1E-266 T 23-04-2016 VV93_RS01160 13caa315a99dbfb1cb7ae2b65a48031b 467 PANTHER PTHR11119 7 457 1.1E-266 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VV93_RS01160 13caa315a99dbfb1cb7ae2b65a48031b 467 TIGRFAM TIGR03173 pbuX: xanthine permease 29 448 2.6E-132 T 23-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 VV93_RS07800 6edf11114436c31ff7a8b95303943445 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 38.392 T 23-04-2016 IPR009809 Cell division protein ZapC VV93_RS07800 6edf11114436c31ff7a8b95303943445 180 Pfam PF07126 Cell-division protein ZapC 1 168 4.1E-62 T 23-04-2016 IPR009809 Cell division protein ZapC VV93_RS07800 6edf11114436c31ff7a8b95303943445 180 PIRSF PIRSF010252 1 178 4.6E-69 T 23-04-2016 IPR009809 Cell division protein ZapC VV93_RS05120 50271db5268bd5eff63a4e6a90e39514 569 PANTHER PTHR10859:SF84 9 243 6.0E-76 T 23-04-2016 VV93_RS05120 50271db5268bd5eff63a4e6a90e39514 569 SUPERFAMILY SSF53448 7 232 4.31E-32 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS05120 50271db5268bd5eff63a4e6a90e39514 569 Pfam PF00535 Glycosyl transferase family 2 8 128 4.4E-19 T 23-04-2016 IPR001173 Glycosyltransferase 2-like VV93_RS05120 50271db5268bd5eff63a4e6a90e39514 569 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 337 552 2.4E-11 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VV93_RS05120 50271db5268bd5eff63a4e6a90e39514 569 Gene3D G3DSA:3.90.550.10 9 129 2.7E-13 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS05120 50271db5268bd5eff63a4e6a90e39514 569 PANTHER PTHR10859 9 243 6.0E-76 T 23-04-2016 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 14 540 9.7E-199 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 Pfam PF01588 Putative tRNA binding domain 595 687 4.3E-26 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 556 689 4.1E-48 T 23-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 389 400 1.7E-24 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 267 1.7E-24 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 95 106 1.7E-24 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 47 61 1.7E-24 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 15 28 1.7E-24 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 296 311 1.7E-24 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 PANTHER PTHR11946 10 645 2.1E-262 T 23-04-2016 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 PANTHER PTHR11946:SF86 10 645 2.1E-262 T 23-04-2016 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 Gene3D G3DSA:1.10.730.10 385 539 2.0E-40 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 Gene3D G3DSA:2.40.50.140 582 689 1.1E-44 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 SUPERFAMILY SSF52374 10 146 1.34E-98 T 23-04-2016 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 SUPERFAMILY SSF52374 181 392 1.34E-98 T 23-04-2016 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 Gene3D G3DSA:2.20.28.20 150 181 5.5E-20 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 Hamap MF_00098 Methionine--tRNA ligase [metG]. 11 550 41.289 T 23-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 Pfam PF09334 tRNA synthetases class I (M) 14 401 5.6E-164 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 Gene3D G3DSA:3.40.50.620 11 149 1.6E-88 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 Gene3D G3DSA:3.40.50.620 188 384 1.6E-88 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 SUPERFAMILY SSF57770 147 181 6.02E-13 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 SUPERFAMILY SSF50249 588 689 1.13E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS06065 e8b6aa5238759fa4032f9b35f5bd0aec 690 SUPERFAMILY SSF47323 391 603 6.35E-44 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VV93_RS04945 101b269343d62827ddcc7668c91e5c74 75 PANTHER PTHR33238 1 73 1.3E-21 T 23-04-2016 VV93_RS04945 101b269343d62827ddcc7668c91e5c74 75 Pfam PF04023 FeoA domain 1 73 1.9E-17 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VV93_RS04945 101b269343d62827ddcc7668c91e5c74 75 SMART SM00899 1 74 2.8E-22 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VV93_RS04945 101b269343d62827ddcc7668c91e5c74 75 SUPERFAMILY SSF50037 4 73 6.64E-18 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal VV93_RS02265 8b961da458fb9f8c78f1f0f1080af6d1 255 PANTHER PTHR34390 1 253 1.0E-126 T 23-04-2016 VV93_RS02265 8b961da458fb9f8c78f1f0f1080af6d1 255 PANTHER PTHR34390:SF2 1 253 1.0E-126 T 23-04-2016 VV93_RS02265 8b961da458fb9f8c78f1f0f1080af6d1 255 Pfam PF06738 Putative threonine/serine exporter 10 247 3.7E-68 T 23-04-2016 IPR010619 Putative threonine/serine exporter VV93_RS12170 72c7607b7699dc0a0c73313a1c98d7d8 137 SMART SM00347 23 124 3.5E-15 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV93_RS12170 72c7607b7699dc0a0c73313a1c98d7d8 137 Pfam PF01047 MarR family 33 88 1.3E-12 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV93_RS12170 72c7607b7699dc0a0c73313a1c98d7d8 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 8.4E-12 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV93_RS12170 72c7607b7699dc0a0c73313a1c98d7d8 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 8.4E-12 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV93_RS12170 72c7607b7699dc0a0c73313a1c98d7d8 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 8.4E-12 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV93_RS12170 72c7607b7699dc0a0c73313a1c98d7d8 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 8.4E-12 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV93_RS12170 72c7607b7699dc0a0c73313a1c98d7d8 137 SUPERFAMILY SSF46785 5 135 7.93E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS12170 72c7607b7699dc0a0c73313a1c98d7d8 137 PANTHER PTHR33164 8 133 3.3E-25 T 23-04-2016 VV93_RS12170 72c7607b7699dc0a0c73313a1c98d7d8 137 PANTHER PTHR33164:SF16 8 133 3.3E-25 T 23-04-2016 VV93_RS12170 72c7607b7699dc0a0c73313a1c98d7d8 137 Gene3D G3DSA:1.10.10.10 9 135 1.9E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS07650 d5e1bf6f2fbf5430bcb0c5e417e4f939 453 Pfam PF04932 O-Antigen ligase 240 376 1.1E-18 T 23-04-2016 IPR007016 O-antigen ligase-related VV93_RS06125 51f9cb7216cc3e1518213e8917c610cf 341 SUPERFAMILY SSF53659 4 336 2.88E-102 T 23-04-2016 VV93_RS06125 51f9cb7216cc3e1518213e8917c610cf 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 1.7E-104 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 VV93_RS06125 51f9cb7216cc3e1518213e8917c610cf 341 PIRSF PIRSF002465 2 339 3.2E-124 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 VV93_RS06125 51f9cb7216cc3e1518213e8917c610cf 341 PANTHER PTHR30100 2 341 6.3E-131 T 23-04-2016 VV93_RS06125 51f9cb7216cc3e1518213e8917c610cf 341 PANTHER PTHR30100:SF1 2 341 6.3E-131 T 23-04-2016 VV93_RS06125 51f9cb7216cc3e1518213e8917c610cf 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 136.245 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 VV93_RS06125 51f9cb7216cc3e1518213e8917c610cf 341 Gene3D G3DSA:3.40.718.10 3 335 1.3E-126 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VV93_RS06125 51f9cb7216cc3e1518213e8917c610cf 341 Pfam PF02504 Fatty acid synthesis protein 5 327 2.0E-98 T 23-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 VV93_RS06905 44c3c7d4eeaea74a03edfd9a4e15af35 400 Gene3D G3DSA:3.40.50.720 184 281 2.8E-4 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS06905 44c3c7d4eeaea74a03edfd9a4e15af35 400 Gene3D G3DSA:3.40.50.720 40 149 2.8E-4 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS06905 44c3c7d4eeaea74a03edfd9a4e15af35 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 9.0E-32 T 23-04-2016 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VV93_RS06905 44c3c7d4eeaea74a03edfd9a4e15af35 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 1.3E-37 T 23-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VV93_RS06905 44c3c7d4eeaea74a03edfd9a4e15af35 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.912 T 23-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VV93_RS06905 44c3c7d4eeaea74a03edfd9a4e15af35 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 3.6E-112 T 23-04-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VV93_RS06905 44c3c7d4eeaea74a03edfd9a4e15af35 400 PANTHER PTHR37480 2 400 3.9E-255 T 23-04-2016 VV93_RS02450 c61d694d0d8f25dc4e7645fa89823490 264 PIRSF PIRSF015558 1 263 8.0E-59 T 23-04-2016 IPR016634 Transcription regulator, DeoR type, predicted VV93_RS02450 c61d694d0d8f25dc4e7645fa89823490 264 Pfam PF13280 WYL domain 101 215 3.9E-10 T 23-04-2016 IPR026881 WYL domain VV93_RS03235 7c46f07e5e1d389a6a0c8b911d122065 334 SUPERFAMILY SSF51261 41 268 3.92E-54 T 23-04-2016 IPR011055 Duplicated hybrid motif VV93_RS03235 7c46f07e5e1d389a6a0c8b911d122065 334 Pfam PF01551 Peptidase family M23 172 267 6.0E-30 T 23-04-2016 IPR016047 Peptidase M23 VV93_RS03235 7c46f07e5e1d389a6a0c8b911d122065 334 PANTHER PTHR21666 54 281 3.4E-38 T 23-04-2016 VV93_RS03235 7c46f07e5e1d389a6a0c8b911d122065 334 Gene3D G3DSA:2.70.70.10 146 271 1.9E-44 T 23-04-2016 VV93_RS08035 79d1518eeb3fb15453bade9f05d1bdcf 285 PANTHER PTHR30193:SF10 7 285 1.5E-126 T 23-04-2016 VV93_RS08035 79d1518eeb3fb15453bade9f05d1bdcf 285 PANTHER PTHR30193 7 285 1.5E-126 T 23-04-2016 VV93_RS08035 79d1518eeb3fb15453bade9f05d1bdcf 285 SUPERFAMILY SSF161098 9 274 2.49E-54 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS08035 79d1518eeb3fb15453bade9f05d1bdcf 285 Gene3D G3DSA:1.10.3720.10 6 271 6.4E-50 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS08035 79d1518eeb3fb15453bade9f05d1bdcf 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 282 5.4E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS12410 b12aceee6f8ec91b93babe74612682d5 409 SUPERFAMILY SSF111352 12 383 1.83E-105 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VV93_RS12410 b12aceee6f8ec91b93babe74612682d5 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 5.2E-205 T 23-04-2016 IPR019879 Ammonium transporter, marine subtype VV93_RS12410 b12aceee6f8ec91b93babe74612682d5 409 PANTHER PTHR11730 2 76 8.9E-144 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 VV93_RS12410 b12aceee6f8ec91b93babe74612682d5 409 PANTHER PTHR11730 95 404 8.9E-144 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 VV93_RS12410 b12aceee6f8ec91b93babe74612682d5 409 Gene3D G3DSA:1.10.3430.10 27 398 1.5E-108 T 23-04-2016 IPR029020 Ammonium/urea transporter VV93_RS12410 b12aceee6f8ec91b93babe74612682d5 409 Pfam PF00909 Ammonium Transporter Family 18 402 4.6E-101 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VV93_RS12410 b12aceee6f8ec91b93babe74612682d5 409 PANTHER PTHR11730:SF6 2 76 8.9E-144 T 23-04-2016 VV93_RS12410 b12aceee6f8ec91b93babe74612682d5 409 PANTHER PTHR11730:SF6 95 404 8.9E-144 T 23-04-2016 VV93_RS12410 b12aceee6f8ec91b93babe74612682d5 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 23-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VV93_RS12750 d922889ed66c98dc47c5c356c2431d27 298 Gene3D G3DSA:3.10.350.10 37 82 6.2E-13 T 23-04-2016 IPR018392 LysM domain VV93_RS12750 d922889ed66c98dc47c5c356c2431d27 298 Pfam PF01551 Peptidase family M23 199 293 2.1E-31 T 23-04-2016 IPR016047 Peptidase M23 VV93_RS12750 d922889ed66c98dc47c5c356c2431d27 298 PANTHER PTHR21666 180 298 2.0E-51 T 23-04-2016 VV93_RS12750 d922889ed66c98dc47c5c356c2431d27 298 SMART SM00257 38 82 2.1E-9 T 23-04-2016 IPR018392 LysM domain VV93_RS12750 d922889ed66c98dc47c5c356c2431d27 298 Pfam PF01476 LysM domain 39 81 3.8E-8 T 23-04-2016 IPR018392 LysM domain VV93_RS12750 d922889ed66c98dc47c5c356c2431d27 298 SUPERFAMILY SSF51261 38 297 1.57E-50 T 23-04-2016 IPR011055 Duplicated hybrid motif VV93_RS12750 d922889ed66c98dc47c5c356c2431d27 298 Gene3D G3DSA:2.70.70.10 168 297 2.0E-41 T 23-04-2016 VV93_RS12750 d922889ed66c98dc47c5c356c2431d27 298 PANTHER PTHR21666:SF222 180 298 2.0E-51 T 23-04-2016 VV93_RS08505 465b0628a789544d0d13f6ea32920b88 133 PANTHER PTHR37103 2 127 2.5E-12 T 23-04-2016 VV93_RS08505 465b0628a789544d0d13f6ea32920b88 133 Pfam PF13642 protein structure with unknown function 31 129 1.9E-30 T 23-04-2016 IPR025284 Protein of unknown function DUF4144 VV93_RS03275 3edabd61804272e5c8d5eaba10fc939b 241 SUPERFAMILY SSF48452 30 119 7.25E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS03275 3edabd61804272e5c8d5eaba10fc939b 241 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 241 45.993 T 23-04-2016 IPR017689 Outer membrane protein assembly factor BamD VV93_RS03275 3edabd61804272e5c8d5eaba10fc939b 241 Gene3D G3DSA:1.25.40.10 32 158 9.2E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS03275 3edabd61804272e5c8d5eaba10fc939b 241 PANTHER PTHR37423 1 240 1.1E-109 T 23-04-2016 VV93_RS03275 3edabd61804272e5c8d5eaba10fc939b 241 Pfam PF13525 Outer membrane lipoprotein 26 233 1.2E-78 T 23-04-2016 VV93_RS03275 3edabd61804272e5c8d5eaba10fc939b 241 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 239 8.3E-79 T 23-04-2016 IPR017689 Outer membrane protein assembly factor BamD VV93_RS02995 8100d32452f124378b9334b2130ed0e9 426 Gene3D G3DSA:3.40.50.1100 193 315 1.8E-53 T 23-04-2016 VV93_RS02995 8100d32452f124378b9334b2130ed0e9 426 Gene3D G3DSA:3.40.50.1100 322 399 2.0E-15 T 23-04-2016 VV93_RS02995 8100d32452f124378b9334b2130ed0e9 426 SUPERFAMILY SSF53686 1 424 7.33E-132 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VV93_RS02995 8100d32452f124378b9334b2130ed0e9 426 PANTHER PTHR10314:SF1 25 426 5.6E-138 T 23-04-2016 VV93_RS02995 8100d32452f124378b9334b2130ed0e9 426 PANTHER PTHR10314 25 426 5.6E-138 T 23-04-2016 VV93_RS02995 8100d32452f124378b9334b2130ed0e9 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 85 368 3.4E-24 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VV93_RS02995 8100d32452f124378b9334b2130ed0e9 426 Pfam PF14821 Threonine synthase N terminus 8 78 5.2E-8 T 23-04-2016 IPR029144 Threonine synthase, N-terminal VV93_RS02995 8100d32452f124378b9334b2130ed0e9 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VV93_RS02995 8100d32452f124378b9334b2130ed0e9 426 Gene3D G3DSA:3.90.1380.10 1 82 4.4E-17 T 23-04-2016 IPR029144 Threonine synthase, N-terminal VV93_RS02995 8100d32452f124378b9334b2130ed0e9 426 Gene3D G3DSA:3.40.50.1100 104 192 7.5E-13 T 23-04-2016 VV93_RS02995 8100d32452f124378b9334b2130ed0e9 426 TIGRFAM TIGR00260 thrC: threonine synthase 53 391 4.3E-115 T 23-04-2016 IPR004450 Threonine synthase-like VV93_RS10545 4dccdc1116b665db3758c7d764d4d199 252 PANTHER PTHR21234:SF22 1 252 3.4E-177 T 23-04-2016 VV93_RS10545 4dccdc1116b665db3758c7d764d4d199 252 SUPERFAMILY SSF53167 4 251 6.02E-72 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV93_RS10545 4dccdc1116b665db3758c7d764d4d199 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 23-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VV93_RS10545 4dccdc1116b665db3758c7d764d4d199 252 Pfam PF01048 Phosphorylase superfamily 20 240 1.9E-40 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV93_RS10545 4dccdc1116b665db3758c7d764d4d199 252 PANTHER PTHR21234 1 252 3.4E-177 T 23-04-2016 IPR018017 Nucleoside phosphorylase VV93_RS10545 4dccdc1116b665db3758c7d764d4d199 252 Gene3D G3DSA:3.40.50.1580 4 251 5.2E-83 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV93_RS10545 4dccdc1116b665db3758c7d764d4d199 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 1.4E-109 T 23-04-2016 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|UniPathway: UPA00574 VV93_RS08760 09dc7465ff267709f245036e07d7b12f 323 PANTHER PTHR11102 21 144 3.0E-16 T 23-04-2016 VV93_RS08760 09dc7465ff267709f245036e07d7b12f 323 SUPERFAMILY SSF46565 264 320 7.46E-12 T 23-04-2016 IPR001623 DnaJ domain VV93_RS08760 09dc7465ff267709f245036e07d7b12f 323 SUPERFAMILY SSF81901 12 133 8.5E-18 T 23-04-2016 VV93_RS08760 09dc7465ff267709f245036e07d7b12f 323 Gene3D G3DSA:1.10.287.110 263 322 1.0E-12 T 23-04-2016 IPR001623 DnaJ domain VV93_RS08760 09dc7465ff267709f245036e07d7b12f 323 Gene3D G3DSA:2.60.120.200 129 244 1.2E-4 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain VV93_RS08760 09dc7465ff267709f245036e07d7b12f 323 SMART SM00671 61 96 4.8E-4 T 23-04-2016 IPR006597 Sel1-like repeat VV93_RS08760 09dc7465ff267709f245036e07d7b12f 323 SMART SM00671 26 60 11.0 T 23-04-2016 IPR006597 Sel1-like repeat VV93_RS08760 09dc7465ff267709f245036e07d7b12f 323 SMART SM00671 97 132 110.0 T 23-04-2016 IPR006597 Sel1-like repeat VV93_RS08760 09dc7465ff267709f245036e07d7b12f 323 Gene3D G3DSA:1.25.40.10 13 128 1.3E-20 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS08760 09dc7465ff267709f245036e07d7b12f 323 Pfam PF08238 Sel1 repeat 63 96 0.011 T 23-04-2016 IPR006597 Sel1-like repeat VV93_RS08760 09dc7465ff267709f245036e07d7b12f 323 Pfam PF08238 Sel1 repeat 27 60 0.089 T 23-04-2016 IPR006597 Sel1-like repeat VV93_RS08760 09dc7465ff267709f245036e07d7b12f 323 Pfam PF08238 Sel1 repeat 99 128 5.7 T 23-04-2016 IPR006597 Sel1-like repeat VV93_RS06870 3378667bcac845b5489823bc88ff5d0a 502 Pfam PF13460 NAD(P)H-binding 28 137 1.5E-11 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS06870 3378667bcac845b5489823bc88ff5d0a 502 Pfam PF11066 Protein of unknown function (DUF2867) 352 485 2.6E-12 T 23-04-2016 IPR021295 Protein of unknown function DUF2867 VV93_RS06870 3378667bcac845b5489823bc88ff5d0a 502 PANTHER PTHR10366 23 261 4.2E-101 T 23-04-2016 VV93_RS06870 3378667bcac845b5489823bc88ff5d0a 502 PANTHER PTHR10366 279 338 4.2E-101 T 23-04-2016 VV93_RS06870 3378667bcac845b5489823bc88ff5d0a 502 Gene3D G3DSA:3.40.50.720 18 242 3.3E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS06870 3378667bcac845b5489823bc88ff5d0a 502 SUPERFAMILY SSF51735 21 314 2.5E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS06870 3378667bcac845b5489823bc88ff5d0a 502 PANTHER PTHR10366:SF401 23 261 4.2E-101 T 23-04-2016 VV93_RS06870 3378667bcac845b5489823bc88ff5d0a 502 PANTHER PTHR10366:SF401 279 338 4.2E-101 T 23-04-2016 VV93_RS11475 5a5bb84f64b06e4d9579aa670be8c1b7 280 Gene3D G3DSA:1.10.8.10 1 54 1.7E-27 T 23-04-2016 VV93_RS11475 5a5bb84f64b06e4d9579aa670be8c1b7 280 SUPERFAMILY SSF54713 55 137 2.83E-18 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VV93_RS11475 5a5bb84f64b06e4d9579aa670be8c1b7 280 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 279 3.6E-104 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 VV93_RS11475 5a5bb84f64b06e4d9579aa670be8c1b7 280 Gene3D G3DSA:1.10.286.20 180 224 1.2E-20 T 23-04-2016 VV93_RS11475 5a5bb84f64b06e4d9579aa670be8c1b7 280 Hamap MF_00050 Elongation factor Ts [tsf]. 1 279 75.839 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 VV93_RS11475 5a5bb84f64b06e4d9579aa670be8c1b7 280 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 23-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 VV93_RS11475 5a5bb84f64b06e4d9579aa670be8c1b7 280 SUPERFAMILY SSF46934 3 53 2.21E-18 T 23-04-2016 IPR009060 UBA-like GO:0005515 VV93_RS11475 5a5bb84f64b06e4d9579aa670be8c1b7 280 Pfam PF00889 Elongation factor TS 70 260 3.5E-62 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VV93_RS11475 5a5bb84f64b06e4d9579aa670be8c1b7 280 PANTHER PTHR11741 1 280 3.4E-122 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 VV93_RS11475 5a5bb84f64b06e4d9579aa670be8c1b7 280 Gene3D G3DSA:3.30.479.20 56 92 5.6E-27 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VV93_RS11475 5a5bb84f64b06e4d9579aa670be8c1b7 280 Gene3D G3DSA:3.30.479.20 164 179 5.6E-27 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VV93_RS11475 5a5bb84f64b06e4d9579aa670be8c1b7 280 Gene3D G3DSA:3.30.479.20 225 263 5.6E-27 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VV93_RS11475 5a5bb84f64b06e4d9579aa670be8c1b7 280 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 23-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 VV93_RS11475 5a5bb84f64b06e4d9579aa670be8c1b7 280 SUPERFAMILY SSF54713 141 277 5.63E-46 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VV93_RS15350 e6784f52f08eb580830df2b493ac6c6a 392 PANTHER PTHR30349 15 375 1.2E-49 T 23-04-2016 VV93_RS15350 e6784f52f08eb580830df2b493ac6c6a 392 Pfam PF00589 Phage integrase family 208 366 3.1E-19 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS15350 e6784f52f08eb580830df2b493ac6c6a 392 Gene3D G3DSA:1.10.443.10 205 380 1.1E-29 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS15350 e6784f52f08eb580830df2b493ac6c6a 392 Pfam PF13102 Phage integrase SAM-like domain 3 151 1.4E-19 T 23-04-2016 IPR025269 Phage integrase SAM-like domain VV93_RS15350 e6784f52f08eb580830df2b493ac6c6a 392 SUPERFAMILY SSF56349 95 376 5.89E-45 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS15350 e6784f52f08eb580830df2b493ac6c6a 392 PANTHER PTHR30349:SF22 15 375 1.2E-49 T 23-04-2016 VV93_RS11070 c00c1811f350d63e2fa3fb1f23bceffd 700 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 3.7E-20 T 23-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 VV93_RS11070 c00c1811f350d63e2fa3fb1f23bceffd 700 PANTHER PTHR30288:SF0 309 405 9.0E-89 T 23-04-2016 VV93_RS11070 c00c1811f350d63e2fa3fb1f23bceffd 700 PANTHER PTHR30288:SF0 1 291 9.0E-89 T 23-04-2016 VV93_RS11070 c00c1811f350d63e2fa3fb1f23bceffd 700 PANTHER PTHR30288:SF0 458 699 9.0E-89 T 23-04-2016 VV93_RS11070 c00c1811f350d63e2fa3fb1f23bceffd 700 PANTHER PTHR30288 309 405 9.0E-89 T 23-04-2016 VV93_RS11070 c00c1811f350d63e2fa3fb1f23bceffd 700 PANTHER PTHR30288 1 291 9.0E-89 T 23-04-2016 VV93_RS11070 c00c1811f350d63e2fa3fb1f23bceffd 700 PANTHER PTHR30288 458 699 9.0E-89 T 23-04-2016 VV93_RS11070 c00c1811f350d63e2fa3fb1f23bceffd 700 Pfam PF07196 Flagellin hook IN motif 125 178 2.0E-9 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VV93_RS11070 c00c1811f350d63e2fa3fb1f23bceffd 700 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 465 689 1.5E-54 T 23-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 VV93_RS07730 a9e0863a58ac53cdfc4aa7a5ff349c8f 161 Gene3D G3DSA:3.10.129.10 11 156 2.8E-25 T 23-04-2016 IPR029069 HotDog domain VV93_RS07730 a9e0863a58ac53cdfc4aa7a5ff349c8f 161 Pfam PF14539 Domain of unknown function (DUF4442) 18 126 5.7E-10 T 23-04-2016 IPR027961 Protein of unknown function DUF4442 VV93_RS07730 a9e0863a58ac53cdfc4aa7a5ff349c8f 161 SUPERFAMILY SSF54637 12 156 1.49E-15 T 23-04-2016 IPR029069 HotDog domain VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 Gene3D G3DSA:3.30.450.20 356 477 2.0E-7 T 23-04-2016 VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 SMART SM00091 366 432 12.0 T 23-04-2016 IPR000014 PAS domain VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 SMART SM00091 491 556 0.0099 T 23-04-2016 IPR000014 PAS domain VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 SUPERFAMILY SSF55785 476 599 6.6E-19 T 23-04-2016 IPR000014 PAS domain VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 SUPERFAMILY SSF141868 792 1040 4.58E-68 T 23-04-2016 IPR001633 EAL domain VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 PANTHER PTHR33121 779 1034 4.1E-54 T 23-04-2016 VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 609 773 2.2E-34 T 23-04-2016 IPR000160 GGDEF domain VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 Pfam PF00563 EAL domain 794 1028 5.4E-55 T 23-04-2016 IPR001633 EAL domain VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 Gene3D G3DSA:3.20.20.450 794 1039 5.5E-69 T 23-04-2016 IPR001633 EAL domain VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 Gene3D G3DSA:3.30.450.20 478 599 1.3E-20 T 23-04-2016 VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 PANTHER PTHR33121:SF10 779 1034 4.1E-54 T 23-04-2016 VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 SMART SM00267 602 774 6.0E-46 T 23-04-2016 IPR000160 GGDEF domain VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 SMART SM00052 786 1033 7.4E-54 T 23-04-2016 IPR001633 EAL domain VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 Gene3D G3DSA:3.30.70.270 615 776 1.6E-43 T 23-04-2016 VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 Pfam PF00990 Diguanylate cyclase, GGDEF domain 613 770 2.0E-35 T 23-04-2016 IPR000160 GGDEF domain VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 SUPERFAMILY SSF55785 354 477 1.74E-8 T 23-04-2016 IPR000014 PAS domain VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 SUPERFAMILY SSF55073 618 774 4.08E-40 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 489 609 9.2E-15 T 23-04-2016 IPR000014 PAS domain VV93_RS00360 27e1c4d9a7b2ea89460bd67070c17e31 1048 Pfam PF13426 PAS domain 502 600 3.0E-9 T 23-04-2016 IPR000014 PAS domain VV93_RS09375 b61720050f06500caa316b7953ae7daf 185 Pfam PF07700 Haem-NO-binding 2 162 2.2E-38 T 23-04-2016 IPR011644 Heme-NO binding GO:0020037 KEGG: 00230+4.6.1.2 VV93_RS09375 b61720050f06500caa316b7953ae7daf 185 SUPERFAMILY SSF111126 1 177 9.94E-50 T 23-04-2016 IPR024096 NO signalling/Golgi transport ligand-binding domain VV93_RS09375 b61720050f06500caa316b7953ae7daf 185 Gene3D G3DSA:3.90.1520.10 1 177 6.0E-55 T 23-04-2016 VV93_RS03230 d95121344b427b1ea842e0af0605aa9e 375 SUPERFAMILY SSF51735 91 237 6.3E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS03230 d95121344b427b1ea842e0af0605aa9e 375 Gene3D G3DSA:1.20.59.10 4 83 7.3E-23 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VV93_RS03230 d95121344b427b1ea842e0af0605aa9e 375 PANTHER PTHR21363 88 371 1.0E-71 T 23-04-2016 VV93_RS03230 d95121344b427b1ea842e0af0605aa9e 375 Pfam PF01817 Chorismate mutase type II 9 87 5.7E-21 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VV93_RS03230 d95121344b427b1ea842e0af0605aa9e 375 Gene3D G3DSA:3.40.50.720 84 247 2.4E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS03230 d95121344b427b1ea842e0af0605aa9e 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 7.9E-42 T 23-04-2016 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 VV93_RS03230 d95121344b427b1ea842e0af0605aa9e 375 PIRSF PIRSF001499 1 374 2.6E-181 T 23-04-2016 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 VV93_RS03230 d95121344b427b1ea842e0af0605aa9e 375 Pfam PF02153 Prephenate dehydrogenase 138 344 4.6E-32 T 23-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 VV93_RS03230 d95121344b427b1ea842e0af0605aa9e 375 SUPERFAMILY SSF48179 242 366 2.04E-39 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VV93_RS03230 d95121344b427b1ea842e0af0605aa9e 375 Gene3D G3DSA:1.10.3660.10 249 373 3.2E-54 T 23-04-2016 VV93_RS03230 d95121344b427b1ea842e0af0605aa9e 375 PANTHER PTHR21363:SF0 88 371 1.0E-71 T 23-04-2016 VV93_RS03230 d95121344b427b1ea842e0af0605aa9e 375 SUPERFAMILY SSF48600 4 88 1.03E-23 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VV93_RS03230 d95121344b427b1ea842e0af0605aa9e 375 SMART SM00830 9 89 1.4E-28 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VV93_RS00610 326eb4879f53976aa93c03bb3fdda5ea 207 Pfam PF01726 LexA DNA binding domain 1 65 8.1E-29 T 23-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 VV93_RS00610 326eb4879f53976aa93c03bb3fdda5ea 207 PANTHER PTHR33516 1 207 2.3E-104 T 23-04-2016 VV93_RS00610 326eb4879f53976aa93c03bb3fdda5ea 207 PANTHER PTHR33516:SF2 1 207 2.3E-104 T 23-04-2016 VV93_RS00610 326eb4879f53976aa93c03bb3fdda5ea 207 Gene3D G3DSA:2.10.109.10 81 204 3.2E-45 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VV93_RS00610 326eb4879f53976aa93c03bb3fdda5ea 207 SUPERFAMILY SSF51306 81 203 1.92E-36 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C VV93_RS00610 326eb4879f53976aa93c03bb3fdda5ea 207 Gene3D G3DSA:1.10.10.10 1 69 1.5E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS00610 326eb4879f53976aa93c03bb3fdda5ea 207 Hamap MF_00015 LexA repressor [lexA]. 3 204 32.01 T 23-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VV93_RS00610 326eb4879f53976aa93c03bb3fdda5ea 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 127 138 7.0E-13 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VV93_RS00610 326eb4879f53976aa93c03bb3fdda5ea 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 116 126 7.0E-13 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VV93_RS00610 326eb4879f53976aa93c03bb3fdda5ea 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 155 167 7.0E-13 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VV93_RS00610 326eb4879f53976aa93c03bb3fdda5ea 207 Pfam PF00717 Peptidase S24-like 119 184 2.7E-15 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B VV93_RS00610 326eb4879f53976aa93c03bb3fdda5ea 207 SUPERFAMILY SSF46785 3 69 3.09E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS00610 326eb4879f53976aa93c03bb3fdda5ea 207 TIGRFAM TIGR00498 lexA: repressor LexA 1 204 6.3E-81 T 23-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VV93_RS13990 5bdd14f36f4376b540ff541a412e493a 158 PIRSF PIRSF002560 1 157 1.8E-72 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV93_RS13990 5bdd14f36f4376b540ff541a412e493a 158 PANTHER PTHR30295:SF9 1 153 1.6E-53 T 23-04-2016 VV93_RS13990 5bdd14f36f4376b540ff541a412e493a 158 SUPERFAMILY SSF47240 1 153 4.06E-55 T 23-04-2016 IPR009078 Ferritin-like superfamily VV93_RS13990 5bdd14f36f4376b540ff541a412e493a 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV93_RS13990 5bdd14f36f4376b540ff541a412e493a 158 Gene3D G3DSA:1.20.1260.10 1 155 2.6E-66 T 23-04-2016 IPR012347 Ferritin-related VV93_RS13990 5bdd14f36f4376b540ff541a412e493a 158 Pfam PF00210 Ferritin-like domain 8 143 7.6E-40 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VV93_RS13990 5bdd14f36f4376b540ff541a412e493a 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 1.7E-82 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV93_RS13990 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 128 149 3.0E-72 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV93_RS13990 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 65 85 3.0E-72 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV93_RS13990 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 3 22 3.0E-72 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV93_RS13990 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 107 127 3.0E-72 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV93_RS13990 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 44 64 3.0E-72 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV93_RS13990 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 23 43 3.0E-72 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV93_RS13990 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 86 106 3.0E-72 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV93_RS13990 5bdd14f36f4376b540ff541a412e493a 158 PANTHER PTHR30295 1 153 1.6E-53 T 23-04-2016 VV93_RS04235 5e0c5681789783d54870abe1a132d099 92 Gene3D G3DSA:3.30.70.1460 8 92 4.5E-36 T 23-04-2016 IPR027471 YbeD-like domain VV93_RS04235 5e0c5681789783d54870abe1a132d099 92 PANTHER PTHR38036:SF1 4 92 7.7E-42 T 23-04-2016 VV93_RS04235 5e0c5681789783d54870abe1a132d099 92 SUPERFAMILY SSF117991 7 92 6.93E-31 T 23-04-2016 IPR027471 YbeD-like domain VV93_RS04235 5e0c5681789783d54870abe1a132d099 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 2.9E-29 T 23-04-2016 IPR007454 Uncharacterised protein family UPF0250 VV93_RS04235 5e0c5681789783d54870abe1a132d099 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.438 T 23-04-2016 IPR007454 Uncharacterised protein family UPF0250 VV93_RS04235 5e0c5681789783d54870abe1a132d099 92 PANTHER PTHR38036 4 92 7.7E-42 T 23-04-2016 VV93_RS12100 17374c953da157fb5a45e1832e080003 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 2.7E-82 T 23-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VV93_RS12100 17374c953da157fb5a45e1832e080003 258 PANTHER PTHR10889:SF3 5 253 1.2E-118 T 23-04-2016 VV93_RS12100 17374c953da157fb5a45e1832e080003 258 PIRSF PIRSF001357 5 252 5.4E-77 T 23-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VV93_RS12100 17374c953da157fb5a45e1832e080003 258 SUPERFAMILY SSF51569 6 245 2.83E-82 T 23-04-2016 VV93_RS12100 17374c953da157fb5a45e1832e080003 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 7.9E-49 T 23-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 VV93_RS12100 17374c953da157fb5a45e1832e080003 258 SMART SM01133 10 244 4.5E-79 T 23-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 VV93_RS12100 17374c953da157fb5a45e1832e080003 258 PANTHER PTHR10889 5 253 1.2E-118 T 23-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VV93_RS12100 17374c953da157fb5a45e1832e080003 258 Gene3D G3DSA:3.20.20.70 3 248 8.7E-93 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS12100 17374c953da157fb5a45e1832e080003 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 52.763 T 23-04-2016 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VV93_RS08515 07ca8ddb9916396ceb556c98ba875827 144 PANTHER PTHR23091 43 137 5.6E-14 T 23-04-2016 VV93_RS08515 07ca8ddb9916396ceb556c98ba875827 144 Pfam PF00583 Acetyltransferase (GNAT) family 53 124 5.4E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS08515 07ca8ddb9916396ceb556c98ba875827 144 PANTHER PTHR23091:SF240 43 137 5.6E-14 T 23-04-2016 VV93_RS08515 07ca8ddb9916396ceb556c98ba875827 144 Gene3D G3DSA:3.40.630.30 32 129 1.9E-17 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS08515 07ca8ddb9916396ceb556c98ba875827 144 SUPERFAMILY SSF55729 17 132 6.52E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS09250 b29d847e73ec051ce2c310cbf7701aeb 422 SMART SM00471 30 159 21.0 T 23-04-2016 IPR003607 HD/PDEase domain VV93_RS09250 b29d847e73ec051ce2c310cbf7701aeb 422 SMART SM00471 244 379 1.5E-10 T 23-04-2016 IPR003607 HD/PDEase domain VV93_RS09250 b29d847e73ec051ce2c310cbf7701aeb 422 SUPERFAMILY SSF109604 238 409 1.59E-32 T 23-04-2016 VV93_RS09250 b29d847e73ec051ce2c310cbf7701aeb 422 Gene3D G3DSA:1.10.3210.10 231 395 3.2E-26 T 23-04-2016 IPR006674 HD domain VV93_RS09250 b29d847e73ec051ce2c310cbf7701aeb 422 Gene3D G3DSA:1.10.3210.10 21 201 1.3E-17 T 23-04-2016 IPR006674 HD domain VV93_RS09250 b29d847e73ec051ce2c310cbf7701aeb 422 TIGRFAM TIGR00277 HDIG: HDIG domain 248 338 3.0E-7 T 23-04-2016 IPR006675 HDIG domain VV93_RS09250 b29d847e73ec051ce2c310cbf7701aeb 422 Pfam PF01966 HD domain 248 369 6.4E-18 T 23-04-2016 IPR006674 HD domain VV93_RS09250 b29d847e73ec051ce2c310cbf7701aeb 422 SUPERFAMILY SSF109604 25 193 2.3E-14 T 23-04-2016 VV93_RS13465 ffa15299265c1435dc9a16d2b9fe3c2c 1295 Pfam PF13116 Protein of unknown function 508 794 4.4E-92 T 23-04-2016 IPR025263 Domain of unknown function DUF3971 VV93_RS13465 ffa15299265c1435dc9a16d2b9fe3c2c 1295 Pfam PF13502 AsmA-like C-terminal region 1032 1272 4.8E-59 T 23-04-2016 IPR032712 AsmA-like, C-terminal VV93_RS13465 ffa15299265c1435dc9a16d2b9fe3c2c 1295 PANTHER PTHR38690 1 1291 0.0 T 23-04-2016 VV93_RS13465 ffa15299265c1435dc9a16d2b9fe3c2c 1295 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 8 1282 0.0 T 23-04-2016 IPR011836 Conserved hypothetical protein CHP02099 VV93_RS04985 583c43b1817e50781fe716bf10cf3a03 639 SMART SM00487 17 310 0.0069 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV93_RS04985 583c43b1817e50781fe716bf10cf3a03 639 Gene3D G3DSA:3.40.50.300 454 602 1.5E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04985 583c43b1817e50781fe716bf10cf3a03 639 Pfam PF13307 Helicase C-terminal domain 462 619 3.9E-35 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VV93_RS04985 583c43b1817e50781fe716bf10cf3a03 639 PANTHER PTHR11472 14 624 7.6E-222 T 23-04-2016 VV93_RS04985 583c43b1817e50781fe716bf10cf3a03 639 SUPERFAMILY SSF52540 14 237 1.27E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04985 583c43b1817e50781fe716bf10cf3a03 639 PANTHER PTHR11472:SF37 14 624 7.6E-222 T 23-04-2016 VV93_RS04985 583c43b1817e50781fe716bf10cf3a03 639 SMART SM00491 477 606 1.4E-45 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VV93_RS04985 583c43b1817e50781fe716bf10cf3a03 639 SUPERFAMILY SSF52540 41 74 3.32E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04985 583c43b1817e50781fe716bf10cf3a03 639 SUPERFAMILY SSF52540 478 600 3.32E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04985 583c43b1817e50781fe716bf10cf3a03 639 Gene3D G3DSA:3.40.50.300 193 237 5.3E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04985 583c43b1817e50781fe716bf10cf3a03 639 Gene3D G3DSA:3.40.50.300 14 117 5.3E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04985 583c43b1817e50781fe716bf10cf3a03 639 Pfam PF04851 Type III restriction enzyme, res subunit 19 251 7.6E-6 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VV93_RS11205 741d389d88e719991dd8e457fb2bf44e 468 Pfam PF13657 HipA N-terminal domain 7 106 2.3E-16 T 23-04-2016 IPR017508 HipA, N-terminal subdomain 1 VV93_RS11205 741d389d88e719991dd8e457fb2bf44e 468 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 25 105 4.4E-12 T 23-04-2016 IPR017508 HipA, N-terminal subdomain 1 VV93_RS11205 741d389d88e719991dd8e457fb2bf44e 468 Pfam PF07804 HipA-like C-terminal domain 236 419 2.1E-22 T 23-04-2016 IPR012893 HipA-like, C-terminal VV93_RS11205 741d389d88e719991dd8e457fb2bf44e 468 Pfam PF07805 HipA-like N-terminal domain 146 225 1.6E-18 T 23-04-2016 IPR012894 HipA, N-terminal subdomain 2 VV93_RS04265 035291730ce00cf67372066ae16a89bb 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.159 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VV93_RS04265 035291730ce00cf67372066ae16a89bb 105 SUPERFAMILY SSF81301 5 105 3.43E-38 T 23-04-2016 VV93_RS04265 035291730ce00cf67372066ae16a89bb 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 1.3E-38 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VV93_RS04265 035291730ce00cf67372066ae16a89bb 105 Gene3D G3DSA:3.30.460.10 4 105 6.9E-38 T 23-04-2016 VV93_RS04265 035291730ce00cf67372066ae16a89bb 105 PANTHER PTHR21043 4 105 3.9E-42 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VV93_RS04265 035291730ce00cf67372066ae16a89bb 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 6.1E-28 T 23-04-2016 VV93_RS11695 8f7422452e4609da018a989a4d3c7128 297 PANTHER PTHR21708:SF24 1 297 7.2E-74 T 23-04-2016 VV93_RS11695 8f7422452e4609da018a989a4d3c7128 297 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 142 3.1E-32 T 23-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 VV93_RS11695 8f7422452e4609da018a989a4d3c7128 297 PANTHER PTHR21708 1 297 7.2E-74 T 23-04-2016 VV93_RS11695 8f7422452e4609da018a989a4d3c7128 297 SUPERFAMILY SSF51735 3 166 1.55E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS11695 8f7422452e4609da018a989a4d3c7128 297 Gene3D G3DSA:1.10.1040.10 175 292 1.1E-43 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VV93_RS11695 8f7422452e4609da018a989a4d3c7128 297 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 293 4.5E-83 T 23-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 VV93_RS11695 8f7422452e4609da018a989a4d3c7128 297 SUPERFAMILY SSF48179 168 291 1.46E-35 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VV93_RS11695 8f7422452e4609da018a989a4d3c7128 297 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 291 5.3E-36 T 23-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 VV93_RS11695 8f7422452e4609da018a989a4d3c7128 297 Gene3D G3DSA:3.40.50.720 3 174 6.4E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS08630 4b4c06d84eb5dcfead76eb22216661a4 318 Pfam PF11185 Protein of unknown function (DUF2971) 174 251 6.2E-14 T 23-04-2016 IPR021352 Protein of unknown function DUF2971 VV93_RS04975 e6b048ae88ef52577a7a24b44087929a 277 SUPERFAMILY SSF53328 82 276 1.31E-59 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV93_RS04975 e6b048ae88ef52577a7a24b44087929a 277 SUPERFAMILY SSF55021 4 54 3.04E-8 T 23-04-2016 VV93_RS04975 e6b048ae88ef52577a7a24b44087929a 277 PIRSF PIRSF036480 1 277 9.9E-112 T 23-04-2016 VV93_RS04975 e6b048ae88ef52577a7a24b44087929a 277 Pfam PF00551 Formyl transferase 82 259 2.1E-47 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV93_RS04975 e6b048ae88ef52577a7a24b44087929a 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 8.5E-122 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VV93_RS04975 e6b048ae88ef52577a7a24b44087929a 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 44.723 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VV93_RS04975 e6b048ae88ef52577a7a24b44087929a 277 Pfam PF01842 ACT domain 5 52 2.1E-6 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VV93_RS04975 e6b048ae88ef52577a7a24b44087929a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 7.7E-65 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VV93_RS04975 e6b048ae88ef52577a7a24b44087929a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 7.7E-65 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VV93_RS04975 e6b048ae88ef52577a7a24b44087929a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 7.7E-65 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VV93_RS04975 e6b048ae88ef52577a7a24b44087929a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 7.7E-65 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VV93_RS04975 e6b048ae88ef52577a7a24b44087929a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 7.7E-65 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VV93_RS04975 e6b048ae88ef52577a7a24b44087929a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 7.7E-65 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VV93_RS04975 e6b048ae88ef52577a7a24b44087929a 277 Gene3D G3DSA:3.30.70.260 3 70 4.9E-11 T 23-04-2016 VV93_RS04975 e6b048ae88ef52577a7a24b44087929a 277 PANTHER PTHR10520:SF7 6 271 4.9E-136 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VV93_RS04975 e6b048ae88ef52577a7a24b44087929a 277 Gene3D G3DSA:3.40.50.170 82 275 1.1E-55 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV93_RS04975 e6b048ae88ef52577a7a24b44087929a 277 PANTHER PTHR10520 6 271 4.9E-136 T 23-04-2016 VV93_RS02835 8bf2d7e33bbd431155622387886e4bb1 255 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 23 247 22.339 T 23-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 VV93_RS02835 8bf2d7e33bbd431155622387886e4bb1 255 PANTHER PTHR35851:SF1 23 255 1.7E-65 T 23-04-2016 VV93_RS02835 8bf2d7e33bbd431155622387886e4bb1 255 Pfam PF03799 Cell division protein FtsQ 127 239 2.1E-24 T 23-04-2016 IPR005548 Cell division protein FtsQ/DivIB VV93_RS02835 8bf2d7e33bbd431155622387886e4bb1 255 PANTHER PTHR35851 23 255 1.7E-65 T 23-04-2016 VV93_RS02835 8bf2d7e33bbd431155622387886e4bb1 255 Pfam PF08478 POTRA domain, FtsQ-type 54 123 2.5E-18 T 23-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type VV93_RS04575 150eded8e54afda423ab501251076559 235 Pfam PF13860 FlgD Ig-like domain 118 184 1.4E-18 T 23-04-2016 IPR025965 FlgD Ig-like domain VV93_RS04575 150eded8e54afda423ab501251076559 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 85 3.0E-22 T 23-04-2016 IPR005648 Flagellar hook capping protein VV93_RS04575 150eded8e54afda423ab501251076559 235 PANTHER PTHR30435:SF15 15 224 3.9E-58 T 23-04-2016 VV93_RS04575 150eded8e54afda423ab501251076559 235 PANTHER PTHR30435 15 224 3.9E-58 T 23-04-2016 VV93_RS04575 150eded8e54afda423ab501251076559 235 Pfam PF13861 FlgD Tudor-like domain 93 229 5.8E-15 T 23-04-2016 IPR025963 FlgD Tudor-like domain VV93_RS01210 57f9e9ec2bac93e01e309f99a40d2dd8 453 PANTHER PTHR30625 21 446 2.1E-85 T 23-04-2016 VV93_RS01210 57f9e9ec2bac93e01e309f99a40d2dd8 453 PIRSF PIRSF037714 2 453 9.7E-172 T 23-04-2016 IPR017270 Putative MotA/TolQ/ExbB family protein VV93_RS01210 57f9e9ec2bac93e01e309f99a40d2dd8 453 Pfam PF01618 MotA/TolQ/ExbB proton channel family 316 434 1.1E-28 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VV93_RS01210 57f9e9ec2bac93e01e309f99a40d2dd8 453 PANTHER PTHR30625:SF0 21 446 2.1E-85 T 23-04-2016 VV93_RS12580 d4e705538048b1168d234ba6eff3ae7b 246 PANTHER PTHR39455 1 246 4.9E-110 T 23-04-2016 VV93_RS12580 d4e705538048b1168d234ba6eff3ae7b 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 33.546 T 23-04-2016 IPR009777 Cell division protein ZapD VV93_RS12580 d4e705538048b1168d234ba6eff3ae7b 246 Gene3D G3DSA:1.10.3900.10 12 171 3.5E-62 T 23-04-2016 VV93_RS12580 d4e705538048b1168d234ba6eff3ae7b 246 SUPERFAMILY SSF160950 1 245 8.24E-93 T 23-04-2016 VV93_RS12580 d4e705538048b1168d234ba6eff3ae7b 246 Pfam PF07072 Protein of unknown function (DUF1342) 18 224 2.1E-76 T 23-04-2016 IPR009777 Cell division protein ZapD VV93_RS12580 d4e705538048b1168d234ba6eff3ae7b 246 PANTHER PTHR39455:SF1 1 246 4.9E-110 T 23-04-2016 VV93_RS12580 d4e705538048b1168d234ba6eff3ae7b 246 Gene3D G3DSA:2.60.440.10 172 245 2.4E-33 T 23-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain VV93_RS09835 612aba7dfa43208b3ba75b7efd512b27 224 SMART SM00862 149 223 6.6E-16 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS09835 612aba7dfa43208b3ba75b7efd512b27 224 Gene3D G3DSA:3.40.50.2300 4 125 3.7E-38 T 23-04-2016 VV93_RS09835 612aba7dfa43208b3ba75b7efd512b27 224 Gene3D G3DSA:1.10.10.10 129 223 7.7E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS09835 612aba7dfa43208b3ba75b7efd512b27 224 SUPERFAMILY SSF52172 4 132 4.41E-40 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS09835 612aba7dfa43208b3ba75b7efd512b27 224 Pfam PF00072 Response regulator receiver domain 9 117 2.6E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS09835 612aba7dfa43208b3ba75b7efd512b27 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 223 1.8E-17 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS09835 612aba7dfa43208b3ba75b7efd512b27 224 PANTHER PTHR26402:SF50 6 223 4.5E-70 T 23-04-2016 VV93_RS09835 612aba7dfa43208b3ba75b7efd512b27 224 SUPERFAMILY SSF46894 123 223 3.4E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV93_RS09835 612aba7dfa43208b3ba75b7efd512b27 224 SMART SM00448 6 117 1.9E-40 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS09835 612aba7dfa43208b3ba75b7efd512b27 224 PANTHER PTHR26402 6 223 4.5E-70 T 23-04-2016 VV93_RS03805 df5a6380598c1f6e14ba9f1b664b8dc3 147 PANTHER PTHR38978 2 147 9.3E-77 T 23-04-2016 VV93_RS03805 df5a6380598c1f6e14ba9f1b664b8dc3 147 Pfam PF10980 Protein of unknown function (DUF2787) 15 145 9.4E-52 T 23-04-2016 IPR021248 Protein of unknown function DUF2787 VV93_RS03805 df5a6380598c1f6e14ba9f1b664b8dc3 147 PANTHER PTHR38978:SF2 2 147 9.3E-77 T 23-04-2016 VV93_RS06130 2f04465a1f13f72f2d36ed7cf41d56d9 316 PANTHER PTHR18919:SF109 26 316 1.4E-131 T 23-04-2016 VV93_RS06130 2f04465a1f13f72f2d36ed7cf41d56d9 316 Gene3D G3DSA:3.40.47.10 161 315 5.0E-52 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS06130 2f04465a1f13f72f2d36ed7cf41d56d9 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 5.3E-35 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VV93_RS06130 2f04465a1f13f72f2d36ed7cf41d56d9 316 SUPERFAMILY SSF53901 3 316 9.29E-73 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS06130 2f04465a1f13f72f2d36ed7cf41d56d9 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 8.9E-145 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VV93_RS06130 2f04465a1f13f72f2d36ed7cf41d56d9 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 73.317 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VV93_RS06130 2f04465a1f13f72f2d36ed7cf41d56d9 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 4.1E-32 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VV93_RS06130 2f04465a1f13f72f2d36ed7cf41d56d9 316 Gene3D G3DSA:3.40.47.10 1 160 5.7E-69 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS06130 2f04465a1f13f72f2d36ed7cf41d56d9 316 PANTHER PTHR18919 26 316 1.4E-131 T 23-04-2016 VV93_RS02850 18f64cc67cc5d96267af27c635e1edb5 305 Gene3D G3DSA:3.30.1700.10 129 283 9.7E-62 T 23-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VV93_RS02850 18f64cc67cc5d96267af27c635e1edb5 305 Gene3D G3DSA:3.30.230.20 3 126 2.8E-47 T 23-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VV93_RS02850 18f64cc67cc5d96267af27c635e1edb5 305 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 281 50.112 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VV93_RS02850 18f64cc67cc5d96267af27c635e1edb5 305 SUPERFAMILY SSF54211 3 125 1.67E-42 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS02850 18f64cc67cc5d96267af27c635e1edb5 305 SUPERFAMILY SSF54211 134 278 3.49E-53 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS02850 18f64cc67cc5d96267af27c635e1edb5 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 1.9E-109 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VV93_RS02850 18f64cc67cc5d96267af27c635e1edb5 305 PANTHER PTHR33694 1 305 3.0E-140 T 23-04-2016 VV93_RS02850 18f64cc67cc5d96267af27c635e1edb5 305 PANTHER PTHR33694:SF1 1 305 3.0E-140 T 23-04-2016 VV93_RS02850 18f64cc67cc5d96267af27c635e1edb5 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 8.0E-144 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VV93_RS15225 a3a04a1257f441e3f14f7c50bb29c63e 270 PANTHER PTHR11410:SF7 135 270 4.6E-100 T 23-04-2016 VV93_RS15225 a3a04a1257f441e3f14f7c50bb29c63e 270 PANTHER PTHR11410:SF7 18 119 4.6E-100 T 23-04-2016 VV93_RS15225 a3a04a1257f441e3f14f7c50bb29c63e 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 1.6E-13 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VV93_RS15225 a3a04a1257f441e3f14f7c50bb29c63e 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 1.6E-13 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VV93_RS15225 a3a04a1257f441e3f14f7c50bb29c63e 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 1.6E-13 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VV93_RS15225 a3a04a1257f441e3f14f7c50bb29c63e 270 PANTHER PTHR11410 135 270 4.6E-100 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VV93_RS15225 a3a04a1257f441e3f14f7c50bb29c63e 270 PANTHER PTHR11410 18 119 4.6E-100 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VV93_RS15225 a3a04a1257f441e3f14f7c50bb29c63e 270 Pfam PF00119 ATP synthase A chain 44 262 1.1E-57 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VV93_RS15225 a3a04a1257f441e3f14f7c50bb29c63e 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 23-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site VV93_RS15225 a3a04a1257f441e3f14f7c50bb29c63e 270 Gene3D G3DSA:1.20.120.220 94 267 5.9E-60 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VV93_RS15225 a3a04a1257f441e3f14f7c50bb29c63e 270 SUPERFAMILY SSF81336 93 262 1.44E-49 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VV93_RS15225 a3a04a1257f441e3f14f7c50bb29c63e 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 2.6E-45 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VV93_RS15225 a3a04a1257f441e3f14f7c50bb29c63e 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.216 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VV93_RS02865 f957db08b5df5b36f30b25b128eca278 132 Gene3D G3DSA:3.90.79.10 1 128 4.3E-34 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS02865 f957db08b5df5b36f30b25b128eca278 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VV93_RS02865 f957db08b5df5b36f30b25b128eca278 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 2.0E-43 T 23-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 VV93_RS02865 f957db08b5df5b36f30b25b128eca278 132 PANTHER PTHR22769 1 130 1.2E-42 T 23-04-2016 VV93_RS02865 f957db08b5df5b36f30b25b128eca278 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 1.0E-9 T 23-04-2016 IPR020476 NUDIX hydrolase VV93_RS02865 f957db08b5df5b36f30b25b128eca278 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 1.0E-9 T 23-04-2016 IPR020476 NUDIX hydrolase VV93_RS02865 f957db08b5df5b36f30b25b128eca278 132 PANTHER PTHR22769:SF36 1 130 1.2E-42 T 23-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 VV93_RS02865 f957db08b5df5b36f30b25b128eca278 132 SUPERFAMILY SSF55811 1 128 3.79E-36 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS02865 f957db08b5df5b36f30b25b128eca278 132 Pfam PF00293 NUDIX domain 7 126 3.7E-22 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VV93_RS09720 4c8150ab0ab15340c050a6b80b43268f 143 Pfam PF05025 RbsD / FucU transport protein family 3 141 2.5E-37 T 23-04-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 VV93_RS09720 4c8150ab0ab15340c050a6b80b43268f 143 PANTHER PTHR31690 1 140 7.9E-55 T 23-04-2016 VV93_RS09720 4c8150ab0ab15340c050a6b80b43268f 143 Gene3D G3DSA:3.40.1650.10 1 141 8.6E-53 T 23-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 VV93_RS09720 4c8150ab0ab15340c050a6b80b43268f 143 SUPERFAMILY SSF102546 1 141 1.44E-42 T 23-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 VV93_RS12380 b39db41da1b95f5308102e777fe8dc39 639 PANTHER PTHR22600:SF21 79 320 2.9E-191 T 23-04-2016 VV93_RS12380 b39db41da1b95f5308102e777fe8dc39 639 PANTHER PTHR22600:SF21 336 638 2.9E-191 T 23-04-2016 VV93_RS12380 b39db41da1b95f5308102e777fe8dc39 639 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 137 256 1.5E-14 T 23-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS12380 b39db41da1b95f5308102e777fe8dc39 639 SUPERFAMILY SSF55545 125 259 1.64E-23 T 23-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VV93_RS12380 b39db41da1b95f5308102e777fe8dc39 639 Gene3D G3DSA:3.30.379.10 131 256 2.2E-17 T 23-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VV93_RS12380 b39db41da1b95f5308102e777fe8dc39 639 PANTHER PTHR22600 79 320 2.9E-191 T 23-04-2016 VV93_RS12380 b39db41da1b95f5308102e777fe8dc39 639 PANTHER PTHR22600 336 638 2.9E-191 T 23-04-2016 VV93_RS12380 b39db41da1b95f5308102e777fe8dc39 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 589 606 3.7E-49 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS12380 b39db41da1b95f5308102e777fe8dc39 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 353 370 3.7E-49 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS12380 b39db41da1b95f5308102e777fe8dc39 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 283 304 3.7E-49 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS12380 b39db41da1b95f5308102e777fe8dc39 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 571 587 3.7E-49 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS12380 b39db41da1b95f5308102e777fe8dc39 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 3.7E-49 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS12380 b39db41da1b95f5308102e777fe8dc39 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 424 437 3.7E-49 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS12380 b39db41da1b95f5308102e777fe8dc39 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 254 271 3.7E-49 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS12380 b39db41da1b95f5308102e777fe8dc39 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 402 420 3.7E-49 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS12380 b39db41da1b95f5308102e777fe8dc39 639 SUPERFAMILY SSF51445 260 620 1.26E-126 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily VV93_RS12380 b39db41da1b95f5308102e777fe8dc39 639 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 260 607 2.5E-120 T 23-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VV93_RS12380 b39db41da1b95f5308102e777fe8dc39 639 Gene3D G3DSA:3.20.20.80 258 637 2.9E-135 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VV93_RS07995 af3f08ff0f2680cdd11c6a380782a4b0 225 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 212 2.8E-55 T 23-04-2016 VV93_RS07995 af3f08ff0f2680cdd11c6a380782a4b0 225 PANTHER PTHR42208 1 221 1.2E-56 T 23-04-2016 VV93_RS07995 af3f08ff0f2680cdd11c6a380782a4b0 225 PANTHER PTHR42208:SF1 1 221 1.2E-56 T 23-04-2016 VV93_RS04770 b1439bb291de4bc279bb9f9abd13778f 652 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 444 650 2.4E-53 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS04770 b1439bb291de4bc279bb9f9abd13778f 652 PANTHER PTHR32089:SF34 224 652 2.0E-114 T 23-04-2016 VV93_RS04770 b1439bb291de4bc279bb9f9abd13778f 652 SMART SM00283 389 651 1.3E-77 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS04770 b1439bb291de4bc279bb9f9abd13778f 652 PANTHER PTHR32089 224 652 2.0E-114 T 23-04-2016 VV93_RS04770 b1439bb291de4bc279bb9f9abd13778f 652 SMART SM00304 321 375 3.8E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS04770 b1439bb291de4bc279bb9f9abd13778f 652 SUPERFAMILY SSF58104 343 652 1.31E-76 T 23-04-2016 VV93_RS04770 b1439bb291de4bc279bb9f9abd13778f 652 Gene3D G3DSA:1.10.287.950 404 621 6.5E-58 T 23-04-2016 VV93_RS04770 b1439bb291de4bc279bb9f9abd13778f 652 Pfam PF00672 HAMP domain 303 372 7.5E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS04770 b1439bb291de4bc279bb9f9abd13778f 652 SMART SM01358 39 292 6.9E-56 T 23-04-2016 IPR032255 Helical bimodular sensor domain VV93_RS04155 bf9f7f394362ecd982de1ed8334f8249 754 Pfam PF13424 Tetratricopeptide repeat 248 311 1.9E-7 T 23-04-2016 VV93_RS04155 bf9f7f394362ecd982de1ed8334f8249 754 SUPERFAMILY SSF48452 169 357 2.19E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS04155 bf9f7f394362ecd982de1ed8334f8249 754 SMART SM00028 288 321 0.13 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS04155 bf9f7f394362ecd982de1ed8334f8249 754 SMART SM00028 82 115 11.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS04155 bf9f7f394362ecd982de1ed8334f8249 754 SMART SM00028 168 201 45.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS04155 bf9f7f394362ecd982de1ed8334f8249 754 SMART SM00028 328 361 11.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS04155 bf9f7f394362ecd982de1ed8334f8249 754 SMART SM00028 248 281 54.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS04155 bf9f7f394362ecd982de1ed8334f8249 754 Gene3D G3DSA:1.25.40.10 138 391 1.3E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS03615 c832dc0b66d854aacb73813c2c5dd754 422 PANTHER PTHR11476:SF9 2 422 1.1E-228 T 23-04-2016 VV93_RS03615 c832dc0b66d854aacb73813c2c5dd754 422 Gene3D G3DSA:3.30.930.10 221 320 2.2E-98 T 23-04-2016 VV93_RS03615 c832dc0b66d854aacb73813c2c5dd754 422 Gene3D G3DSA:3.30.930.10 4 185 2.2E-98 T 23-04-2016 VV93_RS03615 c832dc0b66d854aacb73813c2c5dd754 422 PIRSF PIRSF001549 2 422 7.3E-125 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 VV93_RS03615 c832dc0b66d854aacb73813c2c5dd754 422 SUPERFAMILY SSF52954 327 422 1.8E-26 T 23-04-2016 IPR004154 Anticodon-binding VV93_RS03615 c832dc0b66d854aacb73813c2c5dd754 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.524 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 VV93_RS03615 c832dc0b66d854aacb73813c2c5dd754 422 Pfam PF03129 Anticodon binding domain 329 420 8.6E-11 T 23-04-2016 IPR004154 Anticodon-binding VV93_RS03615 c832dc0b66d854aacb73813c2c5dd754 422 SUPERFAMILY SSF55681 5 320 9.36E-105 T 23-04-2016 VV93_RS03615 c832dc0b66d854aacb73813c2c5dd754 422 Gene3D G3DSA:3.40.50.800 327 421 7.4E-31 T 23-04-2016 IPR004154 Anticodon-binding VV93_RS03615 c832dc0b66d854aacb73813c2c5dd754 422 PANTHER PTHR11476 2 422 1.1E-228 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 VV93_RS03615 c832dc0b66d854aacb73813c2c5dd754 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 1.0E-43 T 23-04-2016 VV93_RS03615 c832dc0b66d854aacb73813c2c5dd754 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 5.1E-157 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 VV93_RS00315 dcf704bfd76efd875ee748f2d09b6dab 458 PANTHER PTHR30354 9 458 5.2E-259 T 23-04-2016 VV93_RS00315 dcf704bfd76efd875ee748f2d09b6dab 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 14 458 2.0E-106 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VV93_RS00315 dcf704bfd76efd875ee748f2d09b6dab 458 PIRSF PIRSF002746 9 458 1.9E-145 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VV93_RS00315 dcf704bfd76efd875ee748f2d09b6dab 458 PANTHER PTHR30354:SF2 9 458 5.2E-259 T 23-04-2016 VV93_RS00315 dcf704bfd76efd875ee748f2d09b6dab 458 Pfam PF02447 GntP family permease 13 457 2.1E-118 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VV93_RS21900 fc1c5f991af65dd04a7d86ccdd7fbca1 179 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 26 138 9.7E-16 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV93_RS21900 fc1c5f991af65dd04a7d86ccdd7fbca1 179 SUPERFAMILY SSF54593 22 178 7.05E-45 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS21900 fc1c5f991af65dd04a7d86ccdd7fbca1 179 PANTHER PTHR11959:SF1 1 179 7.5E-76 T 23-04-2016 VV93_RS21900 fc1c5f991af65dd04a7d86ccdd7fbca1 179 PANTHER PTHR11959 1 179 7.5E-76 T 23-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VV93_RS21900 fc1c5f991af65dd04a7d86ccdd7fbca1 179 Gene3D G3DSA:3.10.180.10 22 178 1.1E-52 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS06630 27f9218790534c3f5435d470c41fef08 301 Pfam PF01368 DHH family 2 142 3.9E-21 T 23-04-2016 IPR001667 DDH domain VV93_RS06630 27f9218790534c3f5435d470c41fef08 301 SMART SM01131 178 300 3.8E-30 T 23-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 VV93_RS06630 27f9218790534c3f5435d470c41fef08 301 PANTHER PTHR12112 1 301 1.7E-100 T 23-04-2016 VV93_RS06630 27f9218790534c3f5435d470c41fef08 301 Gene3D G3DSA:3.90.1640.10 2 181 2.6E-56 T 23-04-2016 VV93_RS06630 27f9218790534c3f5435d470c41fef08 301 PANTHER PTHR12112:SF17 1 301 1.7E-100 T 23-04-2016 VV93_RS06630 27f9218790534c3f5435d470c41fef08 301 SUPERFAMILY SSF64182 1 297 4.32E-67 T 23-04-2016 VV93_RS06630 27f9218790534c3f5435d470c41fef08 301 Pfam PF02833 DHHA2 domain 180 297 4.2E-16 T 23-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 VV93_RS02165 d2cd6d9e6cbc9d9f12e80b3dc61c383a 185 PANTHER PTHR21485 9 181 1.7E-61 T 23-04-2016 VV93_RS02165 d2cd6d9e6cbc9d9f12e80b3dc61c383a 185 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 157 1.5E-7 T 23-04-2016 IPR023214 HAD-like domain VV93_RS02165 d2cd6d9e6cbc9d9f12e80b3dc61c383a 185 SUPERFAMILY SSF56784 21 178 1.84E-39 T 23-04-2016 IPR023214 HAD-like domain VV93_RS02165 d2cd6d9e6cbc9d9f12e80b3dc61c383a 185 PIRSF PIRSF006118 10 185 4.0E-75 T 23-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VV93_RS02165 d2cd6d9e6cbc9d9f12e80b3dc61c383a 185 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 23 174 5.8E-62 T 23-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VV93_RS02165 d2cd6d9e6cbc9d9f12e80b3dc61c383a 185 Gene3D G3DSA:3.40.50.1000 16 173 3.6E-44 T 23-04-2016 IPR023214 HAD-like domain VV93_RS13975 6a68d6b2e7b35c8c36e378d7548e0643 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 90 1.8E-6 T 23-04-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10|UniPathway: UPA00208 VV93_RS13975 6a68d6b2e7b35c8c36e378d7548e0643 115 Gene3D G3DSA:3.30.429.10 1 115 2.4E-39 T 23-04-2016 VV93_RS13975 6a68d6b2e7b35c8c36e378d7548e0643 115 PANTHER PTHR37950 2 115 2.9E-37 T 23-04-2016 VV93_RS13975 6a68d6b2e7b35c8c36e378d7548e0643 115 SUPERFAMILY SSF55331 2 115 2.0E-36 T 23-04-2016 IPR014347 Tautomerase/MIF superfamily VV93_RS13975 6a68d6b2e7b35c8c36e378d7548e0643 115 PANTHER PTHR37950:SF1 2 115 2.9E-37 T 23-04-2016 VV93_RS00900 41c80f1048dbf1dfb2635d000dd2a34b 260 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 34 259 1.5E-82 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VV93_RS00900 41c80f1048dbf1dfb2635d000dd2a34b 260 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 167 181 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VV93_RS00900 41c80f1048dbf1dfb2635d000dd2a34b 260 SUPERFAMILY SSF53335 27 258 2.01E-52 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00900 41c80f1048dbf1dfb2635d000dd2a34b 260 Gene3D G3DSA:3.40.50.150 33 256 8.2E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00900 41c80f1048dbf1dfb2635d000dd2a34b 260 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 45 60 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VV93_RS00900 41c80f1048dbf1dfb2635d000dd2a34b 260 Pfam PF01209 ubiE/COQ5 methyltransferase family 26 259 1.0E-102 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VV93_RS00900 41c80f1048dbf1dfb2635d000dd2a34b 260 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 25 259 38.268 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VV93_RS00900 41c80f1048dbf1dfb2635d000dd2a34b 260 PANTHER PTHR10108:SF864 1 260 1.4E-183 T 23-04-2016 VV93_RS00900 41c80f1048dbf1dfb2635d000dd2a34b 260 PANTHER PTHR10108 1 260 1.4E-183 T 23-04-2016 VV93_RS07630 240dcc9f0e479be2aa5ab80fb8f2ddbd 368 PANTHER PTHR12526 10 362 3.6E-47 T 23-04-2016 VV93_RS07630 240dcc9f0e479be2aa5ab80fb8f2ddbd 368 SUPERFAMILY SSF53756 9 362 7.46E-70 T 23-04-2016 VV93_RS07630 240dcc9f0e479be2aa5ab80fb8f2ddbd 368 Gene3D G3DSA:3.40.50.2000 164 337 5.4E-30 T 23-04-2016 VV93_RS07630 240dcc9f0e479be2aa5ab80fb8f2ddbd 368 Pfam PF13439 Glycosyltransferase Family 4 20 177 2.2E-15 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VV93_RS07630 240dcc9f0e479be2aa5ab80fb8f2ddbd 368 Pfam PF00534 Glycosyl transferases group 1 188 332 2.6E-31 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 VV93_RS02800 9583c3866665270078c0eb5f4c148844 493 PANTHER PTHR23135 12 489 2.6E-198 T 23-04-2016 VV93_RS02800 9583c3866665270078c0eb5f4c148844 493 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 489 1.0E-174 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 VV93_RS02800 9583c3866665270078c0eb5f4c148844 493 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 489 34.791 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 VV93_RS02800 9583c3866665270078c0eb5f4c148844 493 Gene3D G3DSA:3.40.1190.10 109 340 4.0E-77 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02800 9583c3866665270078c0eb5f4c148844 493 Pfam PF01225 Mur ligase family, catalytic domain 25 103 2.5E-13 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02800 9583c3866665270078c0eb5f4c148844 493 SUPERFAMILY SSF53623 109 335 7.85E-74 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02800 9583c3866665270078c0eb5f4c148844 493 Gene3D G3DSA:3.90.190.20 341 483 3.7E-57 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VV93_RS02800 9583c3866665270078c0eb5f4c148844 493 Pfam PF08245 Mur ligase middle domain 115 316 3.8E-53 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02800 9583c3866665270078c0eb5f4c148844 493 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 421 1.7E-24 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VV93_RS02800 9583c3866665270078c0eb5f4c148844 493 PANTHER PTHR23135:SF4 12 489 2.6E-198 T 23-04-2016 VV93_RS02800 9583c3866665270078c0eb5f4c148844 493 Gene3D G3DSA:3.40.1390.10 8 107 1.3E-28 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02800 9583c3866665270078c0eb5f4c148844 493 SUPERFAMILY SSF63418 5 107 1.44E-22 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS02800 9583c3866665270078c0eb5f4c148844 493 SUPERFAMILY SSF53244 338 489 9.62E-51 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VV93_RS07095 38301d3eeffdde409dd39936687d3d0f 212 PANTHER PTHR23029 1 181 1.4E-28 T 23-04-2016 VV93_RS07095 38301d3eeffdde409dd39936687d3d0f 212 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 179 2.1E-51 T 23-04-2016 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VV93_RS07095 38301d3eeffdde409dd39936687d3d0f 212 SUPERFAMILY SSF53254 1 184 9.64E-36 T 23-04-2016 IPR029033 Histidine phosphatase superfamily VV93_RS07095 38301d3eeffdde409dd39936687d3d0f 212 Gene3D G3DSA:3.40.50.1240 1 183 5.4E-35 T 23-04-2016 IPR029033 Histidine phosphatase superfamily VV93_RS07095 38301d3eeffdde409dd39936687d3d0f 212 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 183 1.5E-37 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VV93_RS07095 38301d3eeffdde409dd39936687d3d0f 212 SMART SM00855 2 151 2.4E-10 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VV93_RS12495 7cd08ccea99baef8a5a932b4eac4bb62 256 PANTHER PTHR30413 3 256 9.2E-159 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VV93_RS12495 7cd08ccea99baef8a5a932b4eac4bb62 256 Pfam PF01061 ABC-2 type transporter 8 218 7.3E-39 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 VV93_RS12495 7cd08ccea99baef8a5a932b4eac4bb62 256 PIRSF PIRSF006648 7 253 2.2E-24 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VV93_RS12495 7cd08ccea99baef8a5a932b4eac4bb62 256 PANTHER PTHR30413:SF2 3 256 9.2E-159 T 23-04-2016 VV93_RS12495 7cd08ccea99baef8a5a932b4eac4bb62 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 9.4E-8 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VV93_RS12495 7cd08ccea99baef8a5a932b4eac4bb62 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 9.4E-8 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VV93_RS12495 7cd08ccea99baef8a5a932b4eac4bb62 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 9.4E-8 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VV93_RS12495 7cd08ccea99baef8a5a932b4eac4bb62 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 9.4E-8 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VV93_RS11655 7c166e55175cf4c164c15c500e5b1a58 376 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV93_RS11655 7c166e55175cf4c164c15c500e5b1a58 376 PANTHER PTHR18895:SF6 82 376 1.4E-130 T 23-04-2016 VV93_RS11655 7c166e55175cf4c164c15c500e5b1a58 376 Pfam PF08468 Methyltransferase small domain N-terminal 49 168 2.0E-5 T 23-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS11655 7c166e55175cf4c164c15c500e5b1a58 376 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 50.001 T 23-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS11655 7c166e55175cf4c164c15c500e5b1a58 376 SUPERFAMILY SSF53335 193 355 2.71E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS11655 7c166e55175cf4c164c15c500e5b1a58 376 Pfam PF05175 Methyltransferase small domain 200 373 1.9E-52 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VV93_RS11655 7c166e55175cf4c164c15c500e5b1a58 376 Gene3D G3DSA:3.40.50.150 194 356 5.6E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS11655 7c166e55175cf4c164c15c500e5b1a58 376 PIRSF PIRSF037565 1 376 3.8E-175 T 23-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS11655 7c166e55175cf4c164c15c500e5b1a58 376 PANTHER PTHR18895 82 376 1.4E-130 T 23-04-2016 VV93_RS13570 bab24d1652a5939dbf4ca306edb49a9c 486 SUPERFAMILY SSF53067 57 159 9.84E-10 T 23-04-2016 VV93_RS13570 bab24d1652a5939dbf4ca306edb49a9c 486 PIRSF PIRSF028153 1 486 3.7E-236 T 23-04-2016 IPR016871 MSHA biogenesis protein, MshI VV93_RS12630 efc1e148533d67ae6d6acb2f2f7cb93d 210 SUPERFAMILY SSF53955 17 202 4.57E-23 T 23-04-2016 IPR023346 Lysozyme-like domain VV93_RS12630 efc1e148533d67ae6d6acb2f2f7cb93d 210 Gene3D G3DSA:1.10.530.10 58 199 3.5E-7 T 23-04-2016 VV93_RS14920 998f800da9053a7070d3db89a5715219 69 SUPERFAMILY SSF54285 5 69 3.78E-15 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VV93_RS14920 998f800da9053a7070d3db89a5715219 69 PANTHER PTHR34472 1 69 5.6E-17 T 23-04-2016 VV93_RS14920 998f800da9053a7070d3db89a5715219 69 Pfam PF02597 ThiS family 7 69 1.6E-13 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 VV93_RS14920 998f800da9053a7070d3db89a5715219 69 PANTHER PTHR34472:SF1 1 69 5.6E-17 T 23-04-2016 VV93_RS14920 998f800da9053a7070d3db89a5715219 69 Gene3D G3DSA:3.10.20.30 5 69 1.5E-21 T 23-04-2016 IPR012675 Beta-grasp domain VV93_RS14920 998f800da9053a7070d3db89a5715219 69 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 6 69 2.1E-20 T 23-04-2016 IPR010035 ThiS, thiamine-biosynthesis VV93_RS08240 c41677e1ca8b9fa22f7fb6894322932b 321 Gene3D G3DSA:3.40.1550.10 141 317 4.8E-20 T 23-04-2016 IPR028976 CheC-like domain VV93_RS08240 c41677e1ca8b9fa22f7fb6894322932b 321 SMART SM00448 1 113 2.2E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS08240 c41677e1ca8b9fa22f7fb6894322932b 321 Pfam PF00072 Response regulator receiver domain 3 109 5.4E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS08240 c41677e1ca8b9fa22f7fb6894322932b 321 PANTHER PTHR26402 1 110 1.2E-27 T 23-04-2016 VV93_RS08240 c41677e1ca8b9fa22f7fb6894322932b 321 SUPERFAMILY SSF103039 140 319 5.62E-29 T 23-04-2016 IPR028976 CheC-like domain VV93_RS08240 c41677e1ca8b9fa22f7fb6894322932b 321 SUPERFAMILY SSF52172 1 112 1.42E-27 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS08240 c41677e1ca8b9fa22f7fb6894322932b 321 Gene3D G3DSA:3.40.50.2300 1 115 4.8E-27 T 23-04-2016 VV93_RS16955 615991a263b2af669ce4535f0376339f 115 SUPERFAMILY SSF50249 1 39 1.89E-11 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS16955 615991a263b2af669ce4535f0376339f 115 Gene3D G3DSA:2.40.50.140 1 30 9.1E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS16955 615991a263b2af669ce4535f0376339f 115 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 1 31 8.9E-10 T 23-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS16955 615991a263b2af669ce4535f0376339f 115 PANTHER PTHR13691 1 115 5.6E-60 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS16955 615991a263b2af669ce4535f0376339f 115 SMART SM01382 38 115 2.3E-26 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VV93_RS16955 615991a263b2af669ce4535f0376339f 115 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 39 114 7.2E-29 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VV93_RS16955 615991a263b2af669ce4535f0376339f 115 Gene3D G3DSA:2.30.30.30 33 109 8.5E-34 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 VV93_RS16955 615991a263b2af669ce4535f0376339f 115 SUPERFAMILY SSF50104 41 115 2.41E-27 T 23-04-2016 IPR008991 Translation protein SH3-like domain VV93_RS07295 81e83e9bcd4929eb9ed6643a2abad893 211 Gene3D G3DSA:1.10.10.10 111 210 3.8E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS07295 81e83e9bcd4929eb9ed6643a2abad893 211 SMART SM00421 152 209 6.6E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS07295 81e83e9bcd4929eb9ed6643a2abad893 211 PANTHER PTHR26402:SF151 81 211 1.3E-16 T 23-04-2016 VV93_RS07295 81e83e9bcd4929eb9ed6643a2abad893 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS07295 81e83e9bcd4929eb9ed6643a2abad893 211 SUPERFAMILY SSF46894 150 210 3.4E-17 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV93_RS07295 81e83e9bcd4929eb9ed6643a2abad893 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 208 3.6E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS07295 81e83e9bcd4929eb9ed6643a2abad893 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 3.275599E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS07295 81e83e9bcd4929eb9ed6643a2abad893 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 3.275599E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS07295 81e83e9bcd4929eb9ed6643a2abad893 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 3.275599E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS07295 81e83e9bcd4929eb9ed6643a2abad893 211 PANTHER PTHR26402 81 211 1.3E-16 T 23-04-2016 VV93_RS09245 ae8758681f8645a398314df1430f937b 288 Pfam PF01734 Patatin-like phospholipase 4 168 2.6E-14 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 VV93_RS09245 ae8758681f8645a398314df1430f937b 288 SUPERFAMILY SSF52151 3 260 7.85E-32 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VV93_RS09245 ae8758681f8645a398314df1430f937b 288 PANTHER PTHR14226 3 273 1.0E-57 T 23-04-2016 VV93_RS09245 ae8758681f8645a398314df1430f937b 288 PANTHER PTHR14226:SF25 3 273 1.0E-57 T 23-04-2016 VV93_RS14125 660d4ba687d14f19c2eb13d3aac016ae 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 1.4E-206 T 23-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 VV93_RS14125 660d4ba687d14f19c2eb13d3aac016ae 403 SUPERFAMILY SSF53383 16 400 2.58E-129 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS14125 660d4ba687d14f19c2eb13d3aac016ae 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV93_RS14125 660d4ba687d14f19c2eb13d3aac016ae 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 400 46.337 T 23-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VV93_RS14125 660d4ba687d14f19c2eb13d3aac016ae 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 9.4E-152 T 23-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VV93_RS14125 660d4ba687d14f19c2eb13d3aac016ae 403 Gene3D G3DSA:3.90.1150.10 306 400 1.4E-37 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS14125 660d4ba687d14f19c2eb13d3aac016ae 403 Gene3D G3DSA:3.90.1150.10 14 59 1.4E-37 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS14125 660d4ba687d14f19c2eb13d3aac016ae 403 Gene3D G3DSA:3.40.640.10 60 301 1.8E-90 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS14125 660d4ba687d14f19c2eb13d3aac016ae 403 PANTHER PTHR11986:SF71 12 403 1.0E-200 T 23-04-2016 VV93_RS14125 660d4ba687d14f19c2eb13d3aac016ae 403 Pfam PF00202 Aminotransferase class-III 22 399 8.1E-127 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV93_RS14125 660d4ba687d14f19c2eb13d3aac016ae 403 PANTHER PTHR11986 12 403 1.0E-200 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV93_RS10475 86424cbf19b1e3211c9ede7ceb925118 401 Pfam PF12704 MacB-like periplasmic core domain 29 203 1.4E-11 T 23-04-2016 IPR025857 MacB-like periplasmic core domain VV93_RS10475 86424cbf19b1e3211c9ede7ceb925118 401 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 401 3.5E-131 T 23-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VV93_RS10475 86424cbf19b1e3211c9ede7ceb925118 401 Pfam PF02687 FtsX-like permease family 270 394 7.8E-17 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VV93_RS10475 86424cbf19b1e3211c9ede7ceb925118 401 PANTHER PTHR30489:SF8 1 401 6.8E-205 T 23-04-2016 VV93_RS10475 86424cbf19b1e3211c9ede7ceb925118 401 PANTHER PTHR30489 1 401 6.8E-205 T 23-04-2016 VV93_RS12105 3bfd2aac9c701db92e2eaff80100c70a 420 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 197 417 1.8E-72 T 23-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VV93_RS12105 3bfd2aac9c701db92e2eaff80100c70a 420 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 417 2.1E-150 T 23-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VV93_RS12105 3bfd2aac9c701db92e2eaff80100c70a 420 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 8.7E-26 T 23-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VV93_RS12105 3bfd2aac9c701db92e2eaff80100c70a 420 PANTHER PTHR10590 4 417 1.1E-213 T 23-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VV93_RS12105 3bfd2aac9c701db92e2eaff80100c70a 420 Pfam PF07670 Nucleoside recognition 95 191 3.1E-7 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VV93_RS04075 d610dce020cf2bff8cc86c2f3e681e50 322 Gene3D G3DSA:3.30.1330.10 3 140 1.2E-41 T 23-04-2016 IPR016188 PurM-like, N-terminal domain VV93_RS04075 d610dce020cf2bff8cc86c2f3e681e50 322 Gene3D G3DSA:3.90.650.10 144 320 6.4E-47 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VV93_RS04075 d610dce020cf2bff8cc86c2f3e681e50 322 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 317 29.154 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VV93_RS04075 d610dce020cf2bff8cc86c2f3e681e50 322 PIRSF PIRSF005303 1 320 4.1E-83 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VV93_RS04075 d610dce020cf2bff8cc86c2f3e681e50 322 PANTHER PTHR30270:SF0 1 321 1.4E-127 T 23-04-2016 VV93_RS04075 d610dce020cf2bff8cc86c2f3e681e50 322 SUPERFAMILY SSF56042 141 303 1.24E-35 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VV93_RS04075 d610dce020cf2bff8cc86c2f3e681e50 322 SUPERFAMILY SSF55326 3 137 9.16E-33 T 23-04-2016 VV93_RS04075 d610dce020cf2bff8cc86c2f3e681e50 322 PANTHER PTHR30270 1 321 1.4E-127 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VV93_RS04075 d610dce020cf2bff8cc86c2f3e681e50 322 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 4.8E-21 T 23-04-2016 IPR016188 PurM-like, N-terminal domain VV93_RS04075 d610dce020cf2bff8cc86c2f3e681e50 322 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 5.3E-104 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VV93_RS04075 d610dce020cf2bff8cc86c2f3e681e50 322 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 297 1.3E-10 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VV93_RS11060 c478bbe12d54992067064800c734d6f8 136 Gene3D G3DSA:1.20.120.340 6 127 1.7E-41 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VV93_RS11060 c478bbe12d54992067064800c734d6f8 136 Pfam PF02561 Flagellar protein FliS 6 122 8.9E-37 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VV93_RS11060 c478bbe12d54992067064800c734d6f8 136 PIRSF PIRSF039090 1 132 1.7E-42 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VV93_RS11060 c478bbe12d54992067064800c734d6f8 136 SUPERFAMILY SSF101116 6 127 2.62E-39 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VV93_RS11060 c478bbe12d54992067064800c734d6f8 136 PANTHER PTHR34773 1 133 6.2E-43 T 23-04-2016 VV93_RS11060 c478bbe12d54992067064800c734d6f8 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 7.7E-24 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VV93_RS03260 7ac7719b8010fc2e4d98c8026574ab7e 178 Gene3D G3DSA:3.90.950.10 5 172 2.9E-61 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VV93_RS03260 7ac7719b8010fc2e4d98c8026574ab7e 178 PANTHER PTHR34699 1 176 1.2E-87 T 23-04-2016 VV93_RS03260 7ac7719b8010fc2e4d98c8026574ab7e 178 Pfam PF01931 Protein of unknown function DUF84 9 167 3.5E-55 T 23-04-2016 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 VV93_RS03260 7ac7719b8010fc2e4d98c8026574ab7e 178 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 8 172 3.9E-44 T 23-04-2016 IPR002786 Non-canonical purine NTP phosphatase VV93_RS03260 7ac7719b8010fc2e4d98c8026574ab7e 178 Hamap MF_00648 Non-canonical purine NTP phosphatase. 4 173 29.045 T 23-04-2016 IPR002786 Non-canonical purine NTP phosphatase VV93_RS03260 7ac7719b8010fc2e4d98c8026574ab7e 178 PANTHER PTHR34699:SF3 1 176 1.2E-87 T 23-04-2016 VV93_RS03260 7ac7719b8010fc2e4d98c8026574ab7e 178 SUPERFAMILY SSF52972 4 173 1.31E-58 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VV93_RS11095 ee8cbc7e16314a979d4e259cc0dec802 300 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 3.3E-85 T 23-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- VV93_RS11095 ee8cbc7e16314a979d4e259cc0dec802 300 PANTHER PTHR30521 17 297 4.5E-113 T 23-04-2016 VV93_RS11095 ee8cbc7e16314a979d4e259cc0dec802 300 Pfam PF04261 Dyp-type peroxidase family 5 293 3.3E-89 T 23-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- VV93_RS11095 ee8cbc7e16314a979d4e259cc0dec802 300 PANTHER PTHR30521:SF0 17 297 4.5E-113 T 23-04-2016 VV93_RS11095 ee8cbc7e16314a979d4e259cc0dec802 300 SUPERFAMILY SSF54909 1 296 4.65E-93 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel VV93_RS04200 7d0c33cead9a8708a96fc41f3874e707 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 461 3.2E-203 T 23-04-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 VV93_RS04200 7d0c33cead9a8708a96fc41f3874e707 474 PANTHER PTHR30175:SF4 1 466 2.9E-256 T 23-04-2016 VV93_RS04200 7d0c33cead9a8708a96fc41f3874e707 474 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 7.2E-14 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VV93_RS04200 7d0c33cead9a8708a96fc41f3874e707 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VV93_RS04200 7d0c33cead9a8708a96fc41f3874e707 474 Pfam PF00367 phosphotransferase system, EIIB 11 43 5.2E-14 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VV93_RS04200 7d0c33cead9a8708a96fc41f3874e707 474 SUPERFAMILY SSF55604 9 81 1.29E-20 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VV93_RS04200 7d0c33cead9a8708a96fc41f3874e707 474 Gene3D G3DSA:3.30.1360.60 7 82 5.5E-24 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VV93_RS04200 7d0c33cead9a8708a96fc41f3874e707 474 PANTHER PTHR30175 1 466 2.9E-256 T 23-04-2016 VV93_RS04200 7d0c33cead9a8708a96fc41f3874e707 474 Pfam PF02378 Phosphotransferase system, EIIC 112 404 1.4E-33 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VV93_RS04030 0ce473eeeac3bec26624c99b6b15dcef 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 2 129 31.402 T 23-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 VV93_RS04030 0ce473eeeac3bec26624c99b6b15dcef 129 Pfam PF07417 Transcriptional regulator Crl 6 123 1.0E-47 T 23-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 VV93_RS06020 cdd4eb7395f4f51e96028180010f78e2 474 Hamap MF_01182 Cytochrome c-552 [nrfA]. 3 474 59.232 T 23-04-2016 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 VV93_RS06020 cdd4eb7395f4f51e96028180010f78e2 474 PANTHER PTHR30633 6 474 1.2E-134 T 23-04-2016 VV93_RS06020 cdd4eb7395f4f51e96028180010f78e2 474 PIRSF PIRSF000243 2 474 4.4E-127 T 23-04-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 VV93_RS06020 cdd4eb7395f4f51e96028180010f78e2 474 Pfam PF02335 Cytochrome c552 40 469 4.0E-179 T 23-04-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 VV93_RS06020 cdd4eb7395f4f51e96028180010f78e2 474 Gene3D G3DSA:1.10.710.10 46 309 1.2E-18 T 23-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 VV93_RS06020 cdd4eb7395f4f51e96028180010f78e2 474 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 35 472 9.1E-248 T 23-04-2016 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 VV93_RS06020 cdd4eb7395f4f51e96028180010f78e2 474 SUPERFAMILY SSF48695 36 469 1.12E-161 T 23-04-2016 IPR011031 Multihaem cytochrome VV93_RS06020 cdd4eb7395f4f51e96028180010f78e2 474 Gene3D G3DSA:1.20.140.10 310 443 3.7E-55 T 23-04-2016 VV93_RS12835 f028a40c7add705a3467e67e88a709a1 243 PANTHER PTHR30456:SF0 2 243 5.7E-144 T 23-04-2016 VV93_RS12835 f028a40c7add705a3467e67e88a709a1 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 2.3E-98 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VV93_RS12835 f028a40c7add705a3467e67e88a709a1 243 PANTHER PTHR30456 2 243 5.7E-144 T 23-04-2016 VV93_RS12835 f028a40c7add705a3467e67e88a709a1 243 SUPERFAMILY SSF63892 4 241 2.09E-101 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VV93_RS12835 f028a40c7add705a3467e67e88a709a1 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.521 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VV93_RS12835 f028a40c7add705a3467e67e88a709a1 243 Gene3D G3DSA:3.20.20.70 3 242 7.1E-112 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS12835 f028a40c7add705a3467e67e88a709a1 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.8E-105 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VV93_RS01835 f458c70dc0ff8e2a21cfa6d519da71f3 136 PANTHER PTHR12220 1 136 1.4E-73 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VV93_RS01835 f458c70dc0ff8e2a21cfa6d519da71f3 136 Gene3D G3DSA:3.90.1170.10 22 134 1.7E-53 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VV93_RS01835 f458c70dc0ff8e2a21cfa6d519da71f3 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 3.5E-57 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VV93_RS01835 f458c70dc0ff8e2a21cfa6d519da71f3 136 SUPERFAMILY SSF54686 3 133 4.58E-53 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VV93_RS01835 f458c70dc0ff8e2a21cfa6d519da71f3 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01835 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 4.55E-40 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VV93_RS01835 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 4.55E-40 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VV93_RS01835 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 4.55E-40 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VV93_RS01835 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 4.55E-40 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VV93_RS01835 f458c70dc0ff8e2a21cfa6d519da71f3 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 2.9E-47 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VV93_RS01835 f458c70dc0ff8e2a21cfa6d519da71f3 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.624 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VV93_RS11180 f13f4da042476cf4f5e35f9cbf046db0 154 Pfam PF00578 AhpC/TSA family 6 133 5.7E-37 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 VV93_RS11180 f13f4da042476cf4f5e35f9cbf046db0 154 PANTHER PTHR10681 1 135 2.1E-44 T 23-04-2016 VV93_RS11180 f13f4da042476cf4f5e35f9cbf046db0 154 SUPERFAMILY SSF52833 3 153 5.53E-48 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS11180 f13f4da042476cf4f5e35f9cbf046db0 154 Gene3D G3DSA:3.40.30.10 2 152 1.2E-48 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS11180 f13f4da042476cf4f5e35f9cbf046db0 154 PIRSF PIRSF000239 1 144 9.3E-18 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 VV93_RS11355 2028626d0acc86571709fc854046902f 155 Gene3D G3DSA:3.30.420.10 2 148 2.7E-60 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS11355 2028626d0acc86571709fc854046902f 155 SUPERFAMILY SSF53098 3 143 1.21E-57 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS11355 2028626d0acc86571709fc854046902f 155 PANTHER PTHR10642 1 152 9.3E-62 T 23-04-2016 VV93_RS11355 2028626d0acc86571709fc854046902f 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.473 T 23-04-2016 IPR022892 Ribonuclease H GO:0004523 VV93_RS11355 2028626d0acc86571709fc854046902f 155 Pfam PF00075 RNase H 3 141 2.1E-53 T 23-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VV93_RS10530 44289821d0f15242edde3930d2475536 116 PRINTS PR00332 Histidine triad family signature 6 22 1.1E-18 T 23-04-2016 IPR001310 Histidine triad (HIT) protein VV93_RS10530 44289821d0f15242edde3930d2475536 116 PRINTS PR00332 Histidine triad family signature 95 105 1.1E-18 T 23-04-2016 IPR001310 Histidine triad (HIT) protein VV93_RS10530 44289821d0f15242edde3930d2475536 116 PRINTS PR00332 Histidine triad family signature 27 45 1.1E-18 T 23-04-2016 IPR001310 Histidine triad (HIT) protein VV93_RS10530 44289821d0f15242edde3930d2475536 116 Gene3D G3DSA:3.30.428.10 3 110 1.3E-35 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 VV93_RS10530 44289821d0f15242edde3930d2475536 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 23-04-2016 IPR019808 Histidine triad, conserved site VV93_RS10530 44289821d0f15242edde3930d2475536 116 PANTHER PTHR23089:SF2 2 112 2.2E-48 T 23-04-2016 VV93_RS10530 44289821d0f15242edde3930d2475536 116 Pfam PF01230 HIT domain 12 108 1.1E-28 T 23-04-2016 IPR001310 Histidine triad (HIT) protein VV93_RS10530 44289821d0f15242edde3930d2475536 116 PANTHER PTHR23089 2 112 2.2E-48 T 23-04-2016 IPR001310 Histidine triad (HIT) protein VV93_RS10530 44289821d0f15242edde3930d2475536 116 SUPERFAMILY SSF54197 2 113 1.86E-34 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 VV93_RS05095 c1eb54bcbe0edc37f00ce9c75294d6e1 202 Pfam PF11659 Protein of unknown function (DUF3261) 12 169 3.0E-43 T 23-04-2016 IPR021675 Protein of unknown function DUF3261 VV93_RS06105 52f27cb0fc8fc43e29ef496fa446812f 315 PANTHER PTHR11079:SF84 1 76 3.6E-154 T 23-04-2016 VV93_RS06105 52f27cb0fc8fc43e29ef496fa446812f 315 PANTHER PTHR11079:SF84 95 314 3.6E-154 T 23-04-2016 VV93_RS06105 52f27cb0fc8fc43e29ef496fa446812f 315 SMART SM00363 20 77 2.2E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS06105 52f27cb0fc8fc43e29ef496fa446812f 315 PANTHER PTHR11079 1 76 3.6E-154 T 23-04-2016 VV93_RS06105 52f27cb0fc8fc43e29ef496fa446812f 315 PANTHER PTHR11079 95 314 3.6E-154 T 23-04-2016 VV93_RS06105 52f27cb0fc8fc43e29ef496fa446812f 315 Pfam PF01479 S4 domain 20 66 5.7E-10 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS06105 52f27cb0fc8fc43e29ef496fa446812f 315 SUPERFAMILY SSF55174 19 71 3.01E-9 T 23-04-2016 VV93_RS06105 52f27cb0fc8fc43e29ef496fa446812f 315 Pfam PF00849 RNA pseudouridylate synthase 102 247 3.2E-32 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS06105 52f27cb0fc8fc43e29ef496fa446812f 315 Gene3D G3DSA:3.10.290.10 20 68 1.4E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VV93_RS06105 52f27cb0fc8fc43e29ef496fa446812f 315 SUPERFAMILY SSF55120 96 312 1.76E-65 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS06105 52f27cb0fc8fc43e29ef496fa446812f 315 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS06105 52f27cb0fc8fc43e29ef496fa446812f 315 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 312 1.5E-92 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS05780 4932caff08f0179999560a692bbc95bc 323 Pfam PF00005 ABC transporter 24 180 2.0E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS05780 4932caff08f0179999560a692bbc95bc 323 SMART SM00382 32 238 2.3E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS05780 4932caff08f0179999560a692bbc95bc 323 PANTHER PTHR24220:SF535 5 315 7.0E-161 T 23-04-2016 VV93_RS05780 4932caff08f0179999560a692bbc95bc 323 SUPERFAMILY SSF52540 31 301 1.55E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05780 4932caff08f0179999560a692bbc95bc 323 Gene3D G3DSA:3.40.50.300 2 254 1.6E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05780 4932caff08f0179999560a692bbc95bc 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 5.8E-18 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV93_RS05780 4932caff08f0179999560a692bbc95bc 323 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS05780 4932caff08f0179999560a692bbc95bc 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 4.4E-24 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV93_RS05780 4932caff08f0179999560a692bbc95bc 323 PANTHER PTHR24220 5 315 7.0E-161 T 23-04-2016 VV93_RS11385 27a1fc9fb352c40e15ac50e6e66361fb 112 Gene3D G3DSA:3.30.70.120 1 112 5.7E-52 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VV93_RS11385 27a1fc9fb352c40e15ac50e6e66361fb 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 23-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VV93_RS11385 27a1fc9fb352c40e15ac50e6e66361fb 112 PANTHER PTHR30115 1 112 3.2E-68 T 23-04-2016 VV93_RS11385 27a1fc9fb352c40e15ac50e6e66361fb 112 PIRSF PIRSF039144 1 112 2.2E-58 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV93_RS11385 27a1fc9fb352c40e15ac50e6e66361fb 112 PRINTS PR00340 P-II protein signature 83 103 5.7E-44 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV93_RS11385 27a1fc9fb352c40e15ac50e6e66361fb 112 PRINTS PR00340 P-II protein signature 2 17 5.7E-44 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV93_RS11385 27a1fc9fb352c40e15ac50e6e66361fb 112 PRINTS PR00340 P-II protein signature 52 75 5.7E-44 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV93_RS11385 27a1fc9fb352c40e15ac50e6e66361fb 112 PRINTS PR00340 P-II protein signature 23 41 5.7E-44 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV93_RS11385 27a1fc9fb352c40e15ac50e6e66361fb 112 SUPERFAMILY SSF54913 1 112 2.22E-47 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VV93_RS11385 27a1fc9fb352c40e15ac50e6e66361fb 112 SMART SM00938 4 105 8.5E-70 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV93_RS11385 27a1fc9fb352c40e15ac50e6e66361fb 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.3E-44 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV93_RS11385 27a1fc9fb352c40e15ac50e6e66361fb 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 23-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VV93_RS10265 510f5609725fef9cd432286527fde631 237 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 237 88.491 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 VV93_RS10265 510f5609725fef9cd432286527fde631 237 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 36 221 5.0E-73 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 VV93_RS10265 510f5609725fef9cd432286527fde631 237 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 205 5.9E-66 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 VV93_RS10265 510f5609725fef9cd432286527fde631 237 PANTHER PTHR30098:SF2 1 237 2.9E-78 T 23-04-2016 VV93_RS10265 510f5609725fef9cd432286527fde631 237 PANTHER PTHR30098 1 237 2.9E-78 T 23-04-2016 VV93_RS10265 510f5609725fef9cd432286527fde631 237 SUPERFAMILY SSF55729 4 232 9.53E-86 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS03665 256f013b920f8862a084da9dafdd9b12 563 Pfam PF02839 Carbohydrate binding domain 435 472 5.8E-15 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS03665 256f013b920f8862a084da9dafdd9b12 563 SUPERFAMILY SSF53955 88 349 4.5E-52 T 23-04-2016 IPR023346 Lysozyme-like domain VV93_RS03665 256f013b920f8862a084da9dafdd9b12 563 Pfam PF00182 Chitinase class I 105 325 2.0E-30 T 23-04-2016 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 VV93_RS03665 256f013b920f8862a084da9dafdd9b12 563 PANTHER PTHR22595:SF49 87 357 2.0E-147 T 23-04-2016 VV93_RS03665 256f013b920f8862a084da9dafdd9b12 563 PANTHER PTHR22595 87 357 2.0E-147 T 23-04-2016 VV93_RS03665 256f013b920f8862a084da9dafdd9b12 563 Gene3D G3DSA:2.10.10.20 434 475 3.6E-18 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS03665 256f013b920f8862a084da9dafdd9b12 563 SUPERFAMILY SSF51055 434 475 1.23E-14 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS03665 256f013b920f8862a084da9dafdd9b12 563 SMART SM00495 515 560 1.4 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS03665 256f013b920f8862a084da9dafdd9b12 563 SMART SM00495 433 475 4.5E-16 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV93_RS03665 256f013b920f8862a084da9dafdd9b12 563 Gene3D G3DSA:1.10.530.10 87 153 5.3E-54 T 23-04-2016 VV93_RS03665 256f013b920f8862a084da9dafdd9b12 563 Gene3D G3DSA:1.10.530.10 210 348 5.3E-54 T 23-04-2016 VV93_RS08255 3c0a44541b31f957e3a55e10961ad6da 206 Pfam PF00677 Lumazine binding domain 100 185 2.1E-18 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS08255 3c0a44541b31f957e3a55e10961ad6da 206 Pfam PF00677 Lumazine binding domain 3 87 3.3E-20 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS08255 3c0a44541b31f957e3a55e10961ad6da 206 SUPERFAMILY SSF63380 1 93 1.7E-26 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VV93_RS08255 3c0a44541b31f957e3a55e10961ad6da 206 PANTHER PTHR21098:SF4 1 202 1.6E-114 T 23-04-2016 VV93_RS08255 3c0a44541b31f957e3a55e10961ad6da 206 PIRSF PIRSF000498 1 204 9.7E-68 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS08255 3c0a44541b31f957e3a55e10961ad6da 206 Gene3D G3DSA:2.40.30.20 5 104 2.6E-31 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS08255 3c0a44541b31f957e3a55e10961ad6da 206 Gene3D G3DSA:2.40.30.20 105 199 7.1E-26 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS08255 3c0a44541b31f957e3a55e10961ad6da 206 PANTHER PTHR21098 1 202 1.6E-114 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS08255 3c0a44541b31f957e3a55e10961ad6da 206 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 200 5.2E-77 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS08255 3c0a44541b31f957e3a55e10961ad6da 206 SUPERFAMILY SSF63380 93 198 8.42E-31 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VV93_RS09130 b8535810c2446946694c632f24cc4bad 368 PANTHER PTHR12526 66 368 1.8E-40 T 23-04-2016 VV93_RS09130 b8535810c2446946694c632f24cc4bad 368 PANTHER PTHR12526 3 46 1.8E-40 T 23-04-2016 VV93_RS09130 b8535810c2446946694c632f24cc4bad 368 Pfam PF13439 Glycosyltransferase Family 4 18 177 7.0E-16 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VV93_RS09130 b8535810c2446946694c632f24cc4bad 368 Pfam PF00534 Glycosyl transferases group 1 199 342 1.9E-26 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 VV93_RS09130 b8535810c2446946694c632f24cc4bad 368 SUPERFAMILY SSF53756 5 367 2.08E-61 T 23-04-2016 VV93_RS09130 b8535810c2446946694c632f24cc4bad 368 Gene3D G3DSA:3.40.50.2000 198 313 2.3E-19 T 23-04-2016 VV93_RS15045 2f11337d673911ad4e363de27cb953f1 377 SUPERFAMILY SSF52440 1 88 5.04E-16 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS15045 2f11337d673911ad4e363de27cb953f1 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 1.1E-104 T 23-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VV93_RS15045 2f11337d673911ad4e363de27cb953f1 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 37.174 T 23-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VV93_RS15045 2f11337d673911ad4e363de27cb953f1 377 PANTHER PTHR11609:SF5 3 355 2.0E-116 T 23-04-2016 VV93_RS15045 2f11337d673911ad4e363de27cb953f1 377 Gene3D G3DSA:3.40.50.20 1 82 4.6E-22 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS15045 2f11337d673911ad4e363de27cb953f1 377 SUPERFAMILY SSF51246 299 373 1.33E-18 T 23-04-2016 IPR011054 Rudiment single hybrid motif VV93_RS15045 2f11337d673911ad4e363de27cb953f1 377 Gene3D G3DSA:3.30.1490.20 107 165 3.3E-22 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VV93_RS15045 2f11337d673911ad4e363de27cb953f1 377 Gene3D G3DSA:3.30.470.20 177 360 7.2E-61 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VV93_RS15045 2f11337d673911ad4e363de27cb953f1 377 PANTHER PTHR11609 3 355 2.0E-116 T 23-04-2016 VV93_RS15045 2f11337d673911ad4e363de27cb953f1 377 SUPERFAMILY SSF56059 92 295 2.3E-57 T 23-04-2016 VV93_RS15045 2f11337d673911ad4e363de27cb953f1 377 Pfam PF02222 ATP-grasp domain 101 274 4.3E-52 T 23-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 VV93_RS05075 cbe74f9825a5d8f1fe19c7a5f66f5dcd 409 SUPERFAMILY SSF53901 2 252 1.34E-53 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS05075 cbe74f9825a5d8f1fe19c7a5f66f5dcd 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site VV93_RS05075 cbe74f9825a5d8f1fe19c7a5f66f5dcd 409 Gene3D G3DSA:3.40.47.10 1 260 1.3E-54 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS05075 cbe74f9825a5d8f1fe19c7a5f66f5dcd 409 PANTHER PTHR11712 2 406 1.9E-108 T 23-04-2016 VV93_RS05075 cbe74f9825a5d8f1fe19c7a5f66f5dcd 409 SMART SM00825 Beta-ketoacyl synthase 5 409 1.6E-10 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VV93_RS05075 cbe74f9825a5d8f1fe19c7a5f66f5dcd 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 2.1E-39 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VV93_RS05075 cbe74f9825a5d8f1fe19c7a5f66f5dcd 409 SUPERFAMILY SSF53901 216 406 1.75E-59 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS05075 cbe74f9825a5d8f1fe19c7a5f66f5dcd 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 363 9.5E-28 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal VV93_RS05075 cbe74f9825a5d8f1fe19c7a5f66f5dcd 409 Gene3D G3DSA:3.40.47.10 264 408 2.5E-47 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS09175 9ee0181d37ccde8cb520e9013d84170e 191 Gene3D G3DSA:3.10.560.10 118 186 3.8E-10 T 23-04-2016 VV93_RS09175 9ee0181d37ccde8cb520e9013d84170e 191 PANTHER PTHR33619 1 182 4.7E-34 T 23-04-2016 VV93_RS09175 9ee0181d37ccde8cb520e9013d84170e 191 Pfam PF02563 Polysaccharide biosynthesis/export protein 40 113 3.7E-18 T 23-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VV93_RS09175 9ee0181d37ccde8cb520e9013d84170e 191 Pfam PF10531 SLBB domain 119 162 2.5E-12 T 23-04-2016 IPR019554 Soluble ligand binding domain VV93_RS09175 9ee0181d37ccde8cb520e9013d84170e 191 Gene3D G3DSA:3.30.1950.10 48 117 1.1E-17 T 23-04-2016 VV93_RS10850 249109903d4eb99cc0003b9ede6de660 440 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 440 5.8E-123 T 23-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VV93_RS10850 249109903d4eb99cc0003b9ede6de660 440 PANTHER PTHR35093 213 440 7.0E-216 T 23-04-2016 VV93_RS10850 249109903d4eb99cc0003b9ede6de660 440 PANTHER PTHR35093 4 197 7.0E-216 T 23-04-2016 VV93_RS10850 249109903d4eb99cc0003b9ede6de660 440 Gene3D G3DSA:2.40.160.60 26 440 3.7E-124 T 23-04-2016 VV93_RS10850 249109903d4eb99cc0003b9ede6de660 440 PANTHER PTHR35093:SF1 213 440 7.0E-216 T 23-04-2016 VV93_RS10850 249109903d4eb99cc0003b9ede6de660 440 PANTHER PTHR35093:SF1 4 197 7.0E-216 T 23-04-2016 VV93_RS10850 249109903d4eb99cc0003b9ede6de660 440 SUPERFAMILY SSF56935 27 440 1.42E-91 T 23-04-2016 VV93_RS04435 4bc067087f79c2a25607e16c6eb17680 127 PIRSF PIRSF005610 1 121 7.7E-16 T 23-04-2016 IPR007360 Invasion gene expression up-regulator, SirB VV93_RS04435 4bc067087f79c2a25607e16c6eb17680 127 PANTHER PTHR39594 1 127 1.9E-38 T 23-04-2016 VV93_RS04435 4bc067087f79c2a25607e16c6eb17680 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 3.5E-37 T 23-04-2016 IPR007360 Invasion gene expression up-regulator, SirB VV93_RS10975 c775fd835389e64bfcecbaa075d77ed8 260 PANTHER PTHR30065 1 257 7.5E-87 T 23-04-2016 VV93_RS10975 c775fd835389e64bfcecbaa075d77ed8 260 PANTHER PTHR30065:SF1 1 257 7.5E-87 T 23-04-2016 VV93_RS10975 c775fd835389e64bfcecbaa075d77ed8 260 Pfam PF01311 Bacterial export proteins, family 1 13 243 4.4E-56 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VV93_RS10975 c775fd835389e64bfcecbaa075d77ed8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 9.6E-16 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VV93_RS10975 c775fd835389e64bfcecbaa075d77ed8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 9.6E-16 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VV93_RS10975 c775fd835389e64bfcecbaa075d77ed8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 9.6E-16 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VV93_RS10975 c775fd835389e64bfcecbaa075d77ed8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 9.6E-16 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VV93_RS10975 c775fd835389e64bfcecbaa075d77ed8 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 255 8.7E-74 T 23-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 VV93_RS06240 054fd1e7603a701f0d9345c16484396a 353 Gene3D G3DSA:3.90.226.10 275 312 1.5E-35 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS06240 054fd1e7603a701f0d9345c16484396a 353 Gene3D G3DSA:3.90.226.10 103 209 1.5E-35 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS06240 054fd1e7603a701f0d9345c16484396a 353 PANTHER PTHR33209:SF2 1 353 1.4E-192 T 23-04-2016 VV93_RS06240 054fd1e7603a701f0d9345c16484396a 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 5.2E-55 T 23-04-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 VV93_RS06240 054fd1e7603a701f0d9345c16484396a 353 SUPERFAMILY SSF52096 103 213 2.6E-30 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS06240 054fd1e7603a701f0d9345c16484396a 353 SUPERFAMILY SSF52096 244 303 2.6E-30 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS06240 054fd1e7603a701f0d9345c16484396a 353 Pfam PF01343 Peptidase family S49 166 314 1.0E-46 T 23-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VV93_RS06240 054fd1e7603a701f0d9345c16484396a 353 PANTHER PTHR33209 1 353 1.4E-192 T 23-04-2016 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 Gene3D G3DSA:2.30.42.10 270 365 1.6E-30 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 SUPERFAMILY SSF50156 233 350 8.25E-24 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 PANTHER PTHR22939:SF101 1 455 2.6E-202 T 23-04-2016 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 1.45E-57 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 1.45E-57 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 1.45E-57 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 1.45E-57 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 1.45E-57 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 1.45E-57 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 1.6E-31 T 23-04-2016 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 Gene3D G3DSA:2.30.42.10 389 454 1.3E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 SUPERFAMILY SSF50156 381 452 1.58E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 Gene3D G3DSA:2.40.10.10 37 155 1.1E-34 T 23-04-2016 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 PANTHER PTHR22939 1 455 2.6E-202 T 23-04-2016 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 SMART SM00228 374 447 3.6E-7 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 SMART SM00228 267 349 6.2E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 Pfam PF13180 PDZ domain 269 358 7.5E-17 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 373 444 2.0E-7 T 23-04-2016 IPR001478 PDZ domain GO:0005515 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 1.2E-164 T 23-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 SUPERFAMILY SSF50494 89 275 2.7E-64 T 23-04-2016 IPR009003 Peptidase S1, PA clan VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 SUPERFAMILY SSF50494 11 58 2.7E-64 T 23-04-2016 IPR009003 Peptidase S1, PA clan VV93_RS02710 41e549eec986ff5589ef642f22272a55 455 Gene3D G3DSA:2.40.10.10 156 269 1.9E-44 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 694 8.0E-30 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 783 5.4E-153 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 SUPERFAMILY SSF56784 500 519 4.71E-48 T 23-04-2016 IPR023214 HAD-like domain VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 SUPERFAMILY SSF56784 554 781 4.71E-48 T 23-04-2016 IPR023214 HAD-like domain VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 274 785 1.4E-123 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 Pfam PF00403 Heavy-metal-associated domain 96 154 1.9E-9 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 SUPERFAMILY SSF55008 84 162 1.96E-17 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 PANTHER PTHR24093:SF50 74 787 6.8E-190 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 681 700 5.1E-24 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 5.1E-24 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 716 5.1E-24 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 5.1E-24 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 5.1E-24 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 761 9.4E-73 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 Gene3D G3DSA:3.40.50.1000 602 750 1.8E-46 T 23-04-2016 IPR023214 HAD-like domain VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 Gene3D G3DSA:3.40.50.1000 475 517 1.8E-46 T 23-04-2016 IPR023214 HAD-like domain VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 SUPERFAMILY SSF81653 318 402 3.14E-23 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 Gene3D G3DSA:2.70.150.10 252 402 7.7E-25 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 2.0E-27 T 23-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 PRINTS PR00943 Copper-transporting ATPase signature 276 295 1.7E-5 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 PRINTS PR00943 Copper-transporting ATPase signature 135 155 1.7E-5 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 PRINTS PR00943 Copper-transporting ATPase signature 659 676 1.7E-5 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 PRINTS PR00943 Copper-transporting ATPase signature 296 314 1.7E-5 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 PANTHER PTHR24093 74 787 6.8E-190 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 783 6.8E-161 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 Gene3D G3DSA:3.30.70.100 92 161 7.7E-16 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 Pfam PF00122 E1-E2 ATPase 278 492 2.6E-54 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 ProSitePatterns PS01229 Hypothetical cof family signature 2. 681 703 - T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 SUPERFAMILY SSF81665 251 306 6.28E-11 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 SUPERFAMILY SSF81665 726 764 6.28E-11 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 SUPERFAMILY SSF81665 404 495 6.28E-11 T 23-04-2016 VV93_RS07985 7cc9e3a5b1f4bd1e23df4db8eed766a8 789 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site VV93_RS03240 4d5e7f9ffcbafe4e6e10f41683464fd2 124 PIRSF PIRSF028141 1 120 3.0E-43 T 23-04-2016 IPR027021 Cyclic di-GMP binding protein, PA4608 type VV93_RS03240 4d5e7f9ffcbafe4e6e10f41683464fd2 124 Pfam PF07238 PilZ domain 3 100 2.4E-15 T 23-04-2016 IPR009875 PilZ domain GO:0035438 VV93_RS03240 4d5e7f9ffcbafe4e6e10f41683464fd2 124 Gene3D G3DSA:2.40.10.220 1 121 5.8E-42 T 23-04-2016 VV93_RS03240 4d5e7f9ffcbafe4e6e10f41683464fd2 124 SUPERFAMILY SSF141371 1 120 2.55E-33 T 23-04-2016 VV93_RS03400 e0b0cdf3ff7666562ac5749d6b266cfe 229 PANTHER PTHR26402 3 225 7.0E-153 T 23-04-2016 VV93_RS03400 e0b0cdf3ff7666562ac5749d6b266cfe 229 SMART SM00448 3 116 1.0E-45 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS03400 e0b0cdf3ff7666562ac5749d6b266cfe 229 Gene3D G3DSA:3.40.50.2300 2 124 1.0E-41 T 23-04-2016 VV93_RS03400 e0b0cdf3ff7666562ac5749d6b266cfe 229 PANTHER PTHR26402:SF576 3 225 7.0E-153 T 23-04-2016 VV93_RS03400 e0b0cdf3ff7666562ac5749d6b266cfe 229 SUPERFAMILY SSF52172 3 184 1.81E-43 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS03400 e0b0cdf3ff7666562ac5749d6b266cfe 229 SMART SM00862 150 225 2.4E-28 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS03400 e0b0cdf3ff7666562ac5749d6b266cfe 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 5.9E-113 T 23-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 VV93_RS03400 e0b0cdf3ff7666562ac5749d6b266cfe 229 Gene3D G3DSA:1.10.10.10 129 227 5.5E-37 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS03400 e0b0cdf3ff7666562ac5749d6b266cfe 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.4E-28 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS03400 e0b0cdf3ff7666562ac5749d6b266cfe 229 Pfam PF00072 Response regulator receiver domain 5 116 6.8E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS02870 0f943a3971d77de1d91f10ccbecb5d73 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 1.5E-99 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS02870 0f943a3971d77de1d91f10ccbecb5d73 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 6.4E-41 T 23-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS02870 0f943a3971d77de1d91f10ccbecb5d73 269 SUPERFAMILY SSF51735 236 268 2.68E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS02870 0f943a3971d77de1d91f10ccbecb5d73 269 SUPERFAMILY SSF51735 1 126 2.68E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS02870 0f943a3971d77de1d91f10ccbecb5d73 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 23-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS02870 0f943a3971d77de1d91f10ccbecb5d73 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.679 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS02870 0f943a3971d77de1d91f10ccbecb5d73 269 PANTHER PTHR20836 1 269 5.8E-101 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS02870 0f943a3971d77de1d91f10ccbecb5d73 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 6.1E-44 T 23-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS02870 0f943a3971d77de1d91f10ccbecb5d73 269 PIRSF PIRSF000161 1 268 3.0E-90 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS02870 0f943a3971d77de1d91f10ccbecb5d73 269 SUPERFAMILY SSF55347 127 236 1.46E-37 T 23-04-2016 VV93_RS02870 0f943a3971d77de1d91f10ccbecb5d73 269 Gene3D G3DSA:3.40.50.720 1 163 1.5E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS07495 8bf771ed628765c502875238b2f57357 257 Pfam PF12838 4Fe-4S dicluster domain 151 204 1.5E-6 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV93_RS07495 8bf771ed628765c502875238b2f57357 257 Pfam PF12838 4Fe-4S dicluster domain 65 120 6.7E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV93_RS07495 8bf771ed628765c502875238b2f57357 257 Gene3D G3DSA:3.30.70.20 149 191 1.0E-9 T 23-04-2016 VV93_RS07495 8bf771ed628765c502875238b2f57357 257 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 12 221 1.2E-75 T 23-04-2016 IPR004494 MauM/NapG ferredoxin-type protein VV93_RS07495 8bf771ed628765c502875238b2f57357 257 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 66 77 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV93_RS07495 8bf771ed628765c502875238b2f57357 257 Gene3D G3DSA:3.30.70.20 114 148 9.1E-7 T 23-04-2016 VV93_RS07495 8bf771ed628765c502875238b2f57357 257 Gene3D G3DSA:3.30.70.20 63 113 2.2E-12 T 23-04-2016 VV93_RS07495 8bf771ed628765c502875238b2f57357 257 Gene3D G3DSA:3.30.70.20 192 213 2.2E-12 T 23-04-2016 VV93_RS07495 8bf771ed628765c502875238b2f57357 257 PANTHER PTHR30176 8 247 5.6E-101 T 23-04-2016 VV93_RS07495 8bf771ed628765c502875238b2f57357 257 PANTHER PTHR30176:SF3 8 247 5.6E-101 T 23-04-2016 VV93_RS07495 8bf771ed628765c502875238b2f57357 257 SUPERFAMILY SSF54862 65 214 2.46E-27 T 23-04-2016 VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82693 41 133 2.17E-22 T 23-04-2016 VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 PANTHER PTHR32063:SF31 1 1036 0.0 T 23-04-2016 VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:3.30.2090.10 185 263 2.0E-9 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:1.20.1640.10 284 501 3.2E-51 T 23-04-2016 VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82866 787 1023 2.62E-49 T 23-04-2016 VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82714 184 263 1.18E-10 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:3.30.70.1430 41 136 4.5E-24 T 23-04-2016 VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82866 289 490 2.35E-41 T 23-04-2016 VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:3.30.2090.10 707 788 5.2E-5 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 Pfam PF00873 AcrB/AcrD/AcrF family 9 1021 1.8E-169 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82693 267 325 4.39E-13 T 23-04-2016 VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82693 147 181 4.39E-13 T 23-04-2016 VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 PANTHER PTHR32063 1 1036 0.0 T 23-04-2016 VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 8.4E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 8.4E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 8.4E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 8.4E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 8.4E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 8.4E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82714 706 788 4.05E-5 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS12310 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:1.10.3850.10 795 1021 2.3E-57 T 23-04-2016 VV93_RS00390 c12df03a7dc41c5e38940fe5b1698632 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 1.2E-48 T 23-04-2016 IPR019598 Universal stress protein B VV93_RS00390 c12df03a7dc41c5e38940fe5b1698632 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 36.994 T 23-04-2016 IPR019598 Universal stress protein B VV93_RS01200 4c161ea6f02eb1af29cae267865698b2 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 133 3.4E-32 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 VV93_RS01200 4c161ea6f02eb1af29cae267865698b2 135 PANTHER PTHR30558 1 135 2.5E-33 T 23-04-2016 VV93_RS01200 4c161ea6f02eb1af29cae267865698b2 135 PANTHER PTHR30558:SF3 1 135 2.5E-33 T 23-04-2016 VV93_RS02170 b1f4e83fd4fd197ffdba3c5546ac6c14 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 2.9E-113 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VV93_RS02170 b1f4e83fd4fd197ffdba3c5546ac6c14 323 Gene3D G3DSA:3.40.50.10490 10 191 9.9E-55 T 23-04-2016 VV93_RS02170 b1f4e83fd4fd197ffdba3c5546ac6c14 323 SUPERFAMILY SSF53697 9 316 9.79E-69 T 23-04-2016 VV93_RS02170 b1f4e83fd4fd197ffdba3c5546ac6c14 323 Gene3D G3DSA:3.10.580.10 192 320 5.5E-39 T 23-04-2016 VV93_RS02170 b1f4e83fd4fd197ffdba3c5546ac6c14 323 PANTHER PTHR38418 9 205 1.9E-39 T 23-04-2016 VV93_RS02170 b1f4e83fd4fd197ffdba3c5546ac6c14 323 PIRSF PIRSF004692 1 323 1.3E-130 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VV93_RS02170 b1f4e83fd4fd197ffdba3c5546ac6c14 323 PANTHER PTHR38418:SF1 9 205 1.9E-39 T 23-04-2016 VV93_RS02170 b1f4e83fd4fd197ffdba3c5546ac6c14 323 SMART SM00116 210 258 0.0077 T 23-04-2016 IPR000644 CBS domain VV93_RS02170 b1f4e83fd4fd197ffdba3c5546ac6c14 323 SMART SM00116 275 322 5.0 T 23-04-2016 IPR000644 CBS domain VV93_RS02170 b1f4e83fd4fd197ffdba3c5546ac6c14 323 Pfam PF01380 SIS domain 41 172 3.3E-32 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VV93_RS02170 b1f4e83fd4fd197ffdba3c5546ac6c14 323 Pfam PF00571 CBS domain 203 258 5.2E-5 T 23-04-2016 IPR000644 CBS domain VV93_RS02170 b1f4e83fd4fd197ffdba3c5546ac6c14 323 Pfam PF00571 CBS domain 268 320 2.3E-5 T 23-04-2016 IPR000644 CBS domain VV93_RS10925 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 PANTHER PTHR13696:SF69 1 258 1.3E-146 T 23-04-2016 VV93_RS10925 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 Pfam PF13614 AAA domain 4 177 7.9E-50 T 23-04-2016 IPR025669 AAA domain VV93_RS10925 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 SUPERFAMILY SSF52540 1 252 6.69E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10925 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 Gene3D G3DSA:3.40.50.300 3 248 5.9E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10925 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 PANTHER PTHR13696 1 258 1.3E-146 T 23-04-2016 VV93_RS09555 62ee747858f26dae555bcfa85374b854 459 SUPERFAMILY SSF46626 318 459 4.3E-25 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS09555 62ee747858f26dae555bcfa85374b854 459 PIRSF PIRSF028099 7 459 1.5E-184 T 23-04-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase VV93_RS09555 62ee747858f26dae555bcfa85374b854 459 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 19 459 6.4E-143 T 23-04-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase VV93_RS09555 62ee747858f26dae555bcfa85374b854 459 Gene3D G3DSA:1.10.760.10 321 459 2.6E-19 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS09555 62ee747858f26dae555bcfa85374b854 459 PANTHER PTHR30600:SF4 10 96 2.2E-163 T 23-04-2016 VV93_RS09555 62ee747858f26dae555bcfa85374b854 459 PANTHER PTHR30600:SF4 244 459 2.2E-163 T 23-04-2016 VV93_RS09555 62ee747858f26dae555bcfa85374b854 459 PANTHER PTHR30600:SF4 171 219 2.2E-163 T 23-04-2016 VV93_RS09555 62ee747858f26dae555bcfa85374b854 459 PANTHER PTHR30600 10 96 2.2E-163 T 23-04-2016 VV93_RS09555 62ee747858f26dae555bcfa85374b854 459 PANTHER PTHR30600 244 459 2.2E-163 T 23-04-2016 VV93_RS09555 62ee747858f26dae555bcfa85374b854 459 PANTHER PTHR30600 171 219 2.2E-163 T 23-04-2016 VV93_RS13030 4eab0581aaebeda26ba67fc75b57a53b 187 Gene3D G3DSA:3.30.70.1300 42 130 6.5E-29 T 23-04-2016 VV93_RS13030 4eab0581aaebeda26ba67fc75b57a53b 187 SUPERFAMILY SSF143456 1 187 3.01E-67 T 23-04-2016 VV93_RS13030 4eab0581aaebeda26ba67fc75b57a53b 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 3.1E-52 T 23-04-2016 IPR003774 Protein of unknown function UPF0301 VV93_RS13030 4eab0581aaebeda26ba67fc75b57a53b 187 PANTHER PTHR30327:SF1 1 187 1.8E-69 T 23-04-2016 VV93_RS13030 4eab0581aaebeda26ba67fc75b57a53b 187 PANTHER PTHR30327 1 187 1.8E-69 T 23-04-2016 VV93_RS13030 4eab0581aaebeda26ba67fc75b57a53b 187 Gene3D G3DSA:3.40.1740.10 131 177 2.0E-37 T 23-04-2016 VV93_RS13030 4eab0581aaebeda26ba67fc75b57a53b 187 Gene3D G3DSA:3.40.1740.10 2 40 2.0E-37 T 23-04-2016 VV93_RS13030 4eab0581aaebeda26ba67fc75b57a53b 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.241 T 23-04-2016 IPR003774 Protein of unknown function UPF0301 VV93_RS06825 d05c9e17513b7fb2bfe4c911c3288522 219 SMART SM00862 145 216 3.3E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS06825 d05c9e17513b7fb2bfe4c911c3288522 219 SMART SM00448 1 112 1.5E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS06825 d05c9e17513b7fb2bfe4c911c3288522 219 SUPERFAMILY SSF46894 119 217 3.12E-26 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV93_RS06825 d05c9e17513b7fb2bfe4c911c3288522 219 Gene3D G3DSA:1.10.10.10 122 218 4.3E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS06825 d05c9e17513b7fb2bfe4c911c3288522 219 Pfam PF00072 Response regulator receiver domain 3 113 7.1E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS06825 d05c9e17513b7fb2bfe4c911c3288522 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 2.6E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS06825 d05c9e17513b7fb2bfe4c911c3288522 219 PANTHER PTHR26402:SF316 1 219 1.5E-95 T 23-04-2016 VV93_RS06825 d05c9e17513b7fb2bfe4c911c3288522 219 PANTHER PTHR26402 1 219 1.5E-95 T 23-04-2016 VV93_RS06825 d05c9e17513b7fb2bfe4c911c3288522 219 Gene3D G3DSA:3.40.50.2300 1 120 8.7E-34 T 23-04-2016 VV93_RS06825 d05c9e17513b7fb2bfe4c911c3288522 219 SUPERFAMILY SSF52172 1 118 6.69E-36 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS11720 3d7bf81ce6f4ddd6bf1a0ab0106d0b7e 269 SUPERFAMILY SSF69572 9 267 1.02E-65 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VV93_RS11720 3d7bf81ce6f4ddd6bf1a0ab0106d0b7e 269 Gene3D G3DSA:3.40.50.720 5 267 3.2E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS11720 3d7bf81ce6f4ddd6bf1a0ab0106d0b7e 269 Pfam PF00899 ThiF family 23 263 6.0E-38 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VV93_RS11720 3d7bf81ce6f4ddd6bf1a0ab0106d0b7e 269 PANTHER PTHR10953:SF159 201 266 4.2E-141 T 23-04-2016 VV93_RS11720 3d7bf81ce6f4ddd6bf1a0ab0106d0b7e 269 PANTHER PTHR10953:SF159 13 168 4.2E-141 T 23-04-2016 VV93_RS11720 3d7bf81ce6f4ddd6bf1a0ab0106d0b7e 269 PANTHER PTHR10953 201 266 4.2E-141 T 23-04-2016 VV93_RS11720 3d7bf81ce6f4ddd6bf1a0ab0106d0b7e 269 PANTHER PTHR10953 13 168 4.2E-141 T 23-04-2016 VV93_RS09510 38ca504fcfc001663b0ac07b6f1ee572 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.2E-27 T 23-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VV93_RS09510 38ca504fcfc001663b0ac07b6f1ee572 179 PANTHER PTHR35011:SF4 1 172 2.9E-92 T 23-04-2016 VV93_RS09510 38ca504fcfc001663b0ac07b6f1ee572 179 PANTHER PTHR35011 1 172 2.9E-92 T 23-04-2016 VV93_RS00635 092ce2757f889ca0453a012c7c0d88ac 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 368 2.4E-192 T 23-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VV93_RS00635 092ce2757f889ca0453a012c7c0d88ac 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 23-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site VV93_RS00635 092ce2757f889ca0453a012c7c0d88ac 369 SUPERFAMILY SSF53335 10 367 4.26E-55 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00635 092ce2757f889ca0453a012c7c0d88ac 369 PANTHER PTHR11061 10 368 9.2E-228 T 23-04-2016 VV93_RS00635 092ce2757f889ca0453a012c7c0d88ac 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 23-04-2016 IPR030390 RNA methyltransferase TrmA, active site VV93_RS00635 092ce2757f889ca0453a012c7c0d88ac 369 PANTHER PTHR11061:SF25 10 368 9.2E-228 T 23-04-2016 VV93_RS00635 092ce2757f889ca0453a012c7c0d88ac 369 Gene3D G3DSA:3.40.50.150 155 367 9.3E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00635 092ce2757f889ca0453a012c7c0d88ac 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 368 2.2E-191 T 23-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VV93_RS00635 092ce2757f889ca0453a012c7c0d88ac 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 44.946 T 23-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VV93_RS01885 c616a9c7dd2fbae50df050b059a3a974 167 SUPERFAMILY SSF54768 8 76 4.08E-24 T 23-04-2016 VV93_RS01885 c616a9c7dd2fbae50df050b059a3a974 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 4.0E-69 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VV93_RS01885 c616a9c7dd2fbae50df050b059a3a974 167 SUPERFAMILY SSF54211 80 159 6.57E-27 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS01885 c616a9c7dd2fbae50df050b059a3a974 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 2.6E-29 T 23-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS01885 c616a9c7dd2fbae50df050b059a3a974 167 Gene3D G3DSA:3.30.230.10 78 159 1.1E-32 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV93_RS01885 c616a9c7dd2fbae50df050b059a3a974 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.696 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VV93_RS01885 c616a9c7dd2fbae50df050b059a3a974 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 23-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site VV93_RS01885 c616a9c7dd2fbae50df050b059a3a974 167 Gene3D G3DSA:3.30.160.20 10 73 8.9E-31 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain VV93_RS01885 c616a9c7dd2fbae50df050b059a3a974 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 1.6E-29 T 23-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 VV93_RS01885 c616a9c7dd2fbae50df050b059a3a974 167 PANTHER PTHR13718 10 163 1.2E-78 T 23-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 VV93_RS06375 5549cd5f41806c96e87e137da408b16b 350 PANTHER PTHR22976 4 350 3.4E-178 T 23-04-2016 VV93_RS06375 5549cd5f41806c96e87e137da408b16b 350 Gene3D G3DSA:3.20.20.70 5 313 6.6E-103 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS06375 5549cd5f41806c96e87e137da408b16b 350 SUPERFAMILY SSF102114 5 310 5.89E-89 T 23-04-2016 VV93_RS06375 5549cd5f41806c96e87e137da408b16b 350 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 3.5E-126 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VV93_RS06375 5549cd5f41806c96e87e137da408b16b 350 SMART SM00729 43 255 3.3E-41 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VV93_RS06375 5549cd5f41806c96e87e137da408b16b 350 PIRSF PIRSF001619 1 319 2.4E-139 T 23-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VV93_RS06375 5549cd5f41806c96e87e137da408b16b 350 Pfam PF04055 Radical SAM superfamily 50 199 2.7E-15 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VV93_RS06375 5549cd5f41806c96e87e137da408b16b 350 SMART SM00876 220 312 5.6E-46 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VV93_RS06375 5549cd5f41806c96e87e137da408b16b 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.983 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VV93_RS06375 5549cd5f41806c96e87e137da408b16b 350 PANTHER PTHR22976:SF1 4 350 3.4E-178 T 23-04-2016 VV93_RS06375 5549cd5f41806c96e87e137da408b16b 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 8.9E-21 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VV93_RS04585 69bd2c5ac171b38d9a55ce3ea7c13fa8 249 PANTHER PTHR30435:SF18 1 249 6.1E-106 T 23-04-2016 VV93_RS04585 69bd2c5ac171b38d9a55ce3ea7c13fa8 249 Pfam PF00460 Flagella basal body rod protein 8 35 1.9E-5 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VV93_RS04585 69bd2c5ac171b38d9a55ce3ea7c13fa8 249 SUPERFAMILY SSF117143 77 207 1.7E-15 T 23-04-2016 VV93_RS04585 69bd2c5ac171b38d9a55ce3ea7c13fa8 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 173 242 1.4E-22 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VV93_RS04585 69bd2c5ac171b38d9a55ce3ea7c13fa8 249 PANTHER PTHR30435 1 249 6.1E-106 T 23-04-2016 VV93_RS04585 69bd2c5ac171b38d9a55ce3ea7c13fa8 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 226 8.4E-54 T 23-04-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 VV93_RS04585 69bd2c5ac171b38d9a55ce3ea7c13fa8 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 4.0E-32 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VV93_RS12855 d2ce172a74c15c2121baa886d3ca5604 299 SUPERFAMILY SSF51306 78 298 3.56E-69 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C VV93_RS12855 d2ce172a74c15c2121baa886d3ca5604 299 Pfam PF10502 Signal peptidase, peptidase S26 209 269 1.7E-8 T 23-04-2016 IPR019533 Peptidase S26 VV93_RS12855 d2ce172a74c15c2121baa886d3ca5604 299 Pfam PF00717 Peptidase S24-like 86 166 1.0E-21 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B VV93_RS12855 d2ce172a74c15c2121baa886d3ca5604 299 Gene3D G3DSA:2.10.109.10 232 274 2.7E-55 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VV93_RS12855 d2ce172a74c15c2121baa886d3ca5604 299 Gene3D G3DSA:2.10.109.10 76 153 2.7E-55 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VV93_RS12855 d2ce172a74c15c2121baa886d3ca5604 299 Gene3D G3DSA:2.170.230.10 154 231 4.8E-21 T 23-04-2016 IPR019766 Peptidase S26A, all-beta subdomain VV93_RS12855 d2ce172a74c15c2121baa886d3ca5604 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 237 250 - T 23-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 VV93_RS12855 d2ce172a74c15c2121baa886d3ca5604 299 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 272 5.0E-47 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VV93_RS12855 d2ce172a74c15c2121baa886d3ca5604 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 232 251 6.0E-27 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VV93_RS12855 d2ce172a74c15c2121baa886d3ca5604 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 6.0E-27 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VV93_RS12855 d2ce172a74c15c2121baa886d3ca5604 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 6.0E-27 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VV93_RS12855 d2ce172a74c15c2121baa886d3ca5604 299 PANTHER PTHR12383:SF27 214 276 7.1E-104 T 23-04-2016 VV93_RS12855 d2ce172a74c15c2121baa886d3ca5604 299 PANTHER PTHR12383:SF27 3 191 7.1E-104 T 23-04-2016 VV93_RS12855 d2ce172a74c15c2121baa886d3ca5604 299 PANTHER PTHR12383 214 276 7.1E-104 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VV93_RS12855 d2ce172a74c15c2121baa886d3ca5604 299 PANTHER PTHR12383 3 191 7.1E-104 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VV93_RS12855 d2ce172a74c15c2121baa886d3ca5604 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 23-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 VV93_RS12855 d2ce172a74c15c2121baa886d3ca5604 299 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 23-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 VV93_RS01290 8fb76651bf10c34f6e255d727dcbaaf5 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 286 4.4E-18 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV93_RS01290 8fb76651bf10c34f6e255d727dcbaaf5 368 SUPERFAMILY SSF111369 207 284 1.7E-8 T 23-04-2016 VV93_RS01290 8fb76651bf10c34f6e255d727dcbaaf5 368 SUPERFAMILY SSF111369 122 175 1.7E-8 T 23-04-2016 VV93_RS01290 8fb76651bf10c34f6e255d727dcbaaf5 368 PANTHER PTHR30386 27 323 2.9E-53 T 23-04-2016 VV93_RS01290 8fb76651bf10c34f6e255d727dcbaaf5 368 Gene3D G3DSA:2.40.50.100 59 90 4.7E-18 T 23-04-2016 VV93_RS01290 8fb76651bf10c34f6e255d727dcbaaf5 368 Gene3D G3DSA:2.40.50.100 210 243 4.7E-18 T 23-04-2016 VV93_RS01290 8fb76651bf10c34f6e255d727dcbaaf5 368 PANTHER PTHR30386:SF7 27 323 2.9E-53 T 23-04-2016 VV93_RS01290 8fb76651bf10c34f6e255d727dcbaaf5 368 SUPERFAMILY SSF111369 56 130 1.1E-9 T 23-04-2016 VV93_RS09070 957d3b099dccf2b49033aa8b6b5b3e3f 176 PANTHER PTHR23044:SF5 1 175 8.8E-60 T 23-04-2016 VV93_RS09070 957d3b099dccf2b49033aa8b6b5b3e3f 176 SUPERFAMILY SSF53098 4 175 3.51E-30 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS09070 957d3b099dccf2b49033aa8b6b5b3e3f 176 Gene3D G3DSA:3.30.420.10 3 175 2.7E-39 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS09070 957d3b099dccf2b49033aa8b6b5b3e3f 176 Pfam PF00929 Exonuclease 7 171 2.6E-12 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VV93_RS09070 957d3b099dccf2b49033aa8b6b5b3e3f 176 SMART SM00479 5 176 1.7E-4 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VV93_RS09070 957d3b099dccf2b49033aa8b6b5b3e3f 176 PANTHER PTHR23044 1 175 8.8E-60 T 23-04-2016 VV93_RS09010 e7ee69fe0c09c3e4b2e235b2536cce75 462 Pfam PF00263 Bacterial type II and III secretion system protein 256 415 2.4E-40 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 VV93_RS09010 e7ee69fe0c09c3e4b2e235b2536cce75 462 PANTHER PTHR30332:SF1 182 446 6.5E-58 T 23-04-2016 VV93_RS09010 e7ee69fe0c09c3e4b2e235b2536cce75 462 PANTHER PTHR30332 182 446 6.5E-58 T 23-04-2016 VV93_RS09010 e7ee69fe0c09c3e4b2e235b2536cce75 462 Pfam PF13629 Pilus formation protein N terminal region 23 92 7.1E-18 T 23-04-2016 IPR032789 Pilus formation protein, N-terminal VV93_RS09010 e7ee69fe0c09c3e4b2e235b2536cce75 462 PRINTS PR00811 Bacterial general secretion pathway protein D signature 403 417 4.7E-9 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS09010 e7ee69fe0c09c3e4b2e235b2536cce75 462 PRINTS PR00811 Bacterial general secretion pathway protein D signature 252 276 4.7E-9 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS09010 e7ee69fe0c09c3e4b2e235b2536cce75 462 PRINTS PR00811 Bacterial general secretion pathway protein D signature 380 398 4.7E-9 T 23-04-2016 IPR001775 GspD/PilQ family VV93_RS10665 e84de50260f27c466b4d980fc5da96db 239 PANTHER PTHR26402 7 230 8.4E-88 T 23-04-2016 VV93_RS10665 e84de50260f27c466b4d980fc5da96db 239 Gene3D G3DSA:1.10.10.10 131 232 8.9E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS10665 e84de50260f27c466b4d980fc5da96db 239 SUPERFAMILY SSF46894 131 231 1.62E-28 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV93_RS10665 e84de50260f27c466b4d980fc5da96db 239 SMART SM00862 154 230 7.3E-25 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS10665 e84de50260f27c466b4d980fc5da96db 239 PANTHER PTHR26402:SF514 7 230 8.4E-88 T 23-04-2016 VV93_RS10665 e84de50260f27c466b4d980fc5da96db 239 SUPERFAMILY SSF52172 4 129 2.7E-36 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS10665 e84de50260f27c466b4d980fc5da96db 239 Gene3D G3DSA:3.40.50.2300 6 130 1.9E-35 T 23-04-2016 VV93_RS10665 e84de50260f27c466b4d980fc5da96db 239 SMART SM00448 7 117 3.0E-34 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS10665 e84de50260f27c466b4d980fc5da96db 239 Pfam PF00072 Response regulator receiver domain 9 117 4.3E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS10665 e84de50260f27c466b4d980fc5da96db 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 7.6E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV93_RS03080 85015549800db911e247b36d5efb51be 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VV93_RS03080 85015549800db911e247b36d5efb51be 444 PANTHER PTHR32071:SF34 27 442 6.6E-197 T 23-04-2016 VV93_RS03080 85015549800db911e247b36d5efb51be 444 Gene3D G3DSA:3.40.50.300 144 311 4.4E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03080 85015549800db911e247b36d5efb51be 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 5.6E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS03080 85015549800db911e247b36d5efb51be 444 Gene3D G3DSA:1.10.10.60 386 438 7.2E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS03080 85015549800db911e247b36d5efb51be 444 PANTHER PTHR32071 27 442 6.6E-197 T 23-04-2016 VV93_RS03080 85015549800db911e247b36d5efb51be 444 SUPERFAMILY SSF46689 351 438 2.69E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS03080 85015549800db911e247b36d5efb51be 444 SUPERFAMILY SSF52540 146 379 7.07E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03080 85015549800db911e247b36d5efb51be 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 3.6E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS03080 85015549800db911e247b36d5efb51be 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 3.6E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV93_RS03080 85015549800db911e247b36d5efb51be 444 SMART SM00382 166 303 0.0054 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS03080 85015549800db911e247b36d5efb51be 444 Pfam PF00158 Sigma-54 interaction domain 146 305 8.7E-34 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV93_RS03080 85015549800db911e247b36d5efb51be 444 Gene3D G3DSA:1.10.8.60 312 385 9.4E-23 T 23-04-2016 VV93_RS06475 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 Pfam PF08029 HisG, C-terminal domain 222 295 5.1E-24 T 23-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VV93_RS06475 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 3.3E-55 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VV93_RS06475 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 SUPERFAMILY SSF53850 5 222 4.25E-67 T 23-04-2016 VV93_RS06475 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 23-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VV93_RS06475 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 SUPERFAMILY SSF54913 225 297 5.23E-21 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VV93_RS06475 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 202 297 1.6E-30 T 23-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VV93_RS06475 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 Gene3D G3DSA:3.40.190.10 2 138 2.4E-49 T 23-04-2016 VV93_RS06475 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 PANTHER PTHR21403:SF0 1 298 3.9E-123 T 23-04-2016 VV93_RS06475 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 7.4E-46 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VV93_RS06475 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.48 T 23-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VV93_RS06475 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 Gene3D G3DSA:3.30.70.120 225 298 2.9E-30 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VV93_RS06475 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 PANTHER PTHR21403 1 298 3.9E-123 T 23-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 40.891 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 PANTHER PTHR11482:SF5 3 416 1.9E-179 T 23-04-2016 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 229 242 - T 23-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 PANTHER PTHR11482 3 416 1.9E-179 T 23-04-2016 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 4.2E-167 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 Gene3D G3DSA:2.40.37.10 269 415 5.4E-48 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 2.5E-29 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 2.5E-29 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 2.5E-29 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 2.5E-29 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 288 390 8.6E-17 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 6.9E-27 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 6.9E-27 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 6.9E-27 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 6.9E-27 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 6.9E-27 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 23-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 SUPERFAMILY SSF50621 261 414 1.05E-51 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 SUPERFAMILY SSF51419 27 284 7.07E-82 T 23-04-2016 IPR029066 PLP-binding barrel VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 Gene3D G3DSA:3.20.20.10 37 268 4.9E-83 T 23-04-2016 IPR029066 PLP-binding barrel VV93_RS00435 8988b19f4f52871ba040ad74cb42552d 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 283 1.2E-74 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 VV93_RS11000 d67282e3477ed193a02037ec3685e49d 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 9.9E-19 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VV93_RS11000 d67282e3477ed193a02037ec3685e49d 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 9.9E-19 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VV93_RS11000 d67282e3477ed193a02037ec3685e49d 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 9.9E-19 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VV93_RS11000 d67282e3477ed193a02037ec3685e49d 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 9.9E-19 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VV93_RS11000 d67282e3477ed193a02037ec3685e49d 347 PIRSF PIRSF002888 1 328 7.9E-90 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VV93_RS11000 d67282e3477ed193a02037ec3685e49d 347 PANTHER PTHR30034:SF0 2 338 4.2E-149 T 23-04-2016 VV93_RS11000 d67282e3477ed193a02037ec3685e49d 347 PANTHER PTHR30034 2 338 4.2E-149 T 23-04-2016 VV93_RS11000 d67282e3477ed193a02037ec3685e49d 347 Gene3D G3DSA:2.30.330.10 243 322 2.3E-9 T 23-04-2016 VV93_RS11000 d67282e3477ed193a02037ec3685e49d 347 Pfam PF02154 Flagellar motor switch protein FliM 37 229 2.1E-83 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VV93_RS11000 d67282e3477ed193a02037ec3685e49d 347 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 320 1.8E-121 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VV93_RS11000 d67282e3477ed193a02037ec3685e49d 347 Gene3D G3DSA:3.40.1550.10 60 230 5.8E-6 T 23-04-2016 IPR028976 CheC-like domain VV93_RS11000 d67282e3477ed193a02037ec3685e49d 347 SUPERFAMILY SSF101801 247 322 3.53E-13 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) VV93_RS11000 d67282e3477ed193a02037ec3685e49d 347 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 1.5E-16 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) VV93_RS11000 d67282e3477ed193a02037ec3685e49d 347 SUPERFAMILY SSF103039 54 230 5.75E-21 T 23-04-2016 IPR028976 CheC-like domain VV93_RS11000 d67282e3477ed193a02037ec3685e49d 347 SUPERFAMILY SSF103039 4 13 5.75E-21 T 23-04-2016 IPR028976 CheC-like domain VV93_RS05640 05ffbd85142505ae298bbf93555ef2f0 194 PIRSF PIRSF000349 1 194 7.2E-84 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS05640 05ffbd85142505ae298bbf93555ef2f0 194 PANTHER PTHR11404 1 194 5.4E-110 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS05640 05ffbd85142505ae298bbf93555ef2f0 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 3.4E-38 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS05640 05ffbd85142505ae298bbf93555ef2f0 194 SUPERFAMILY SSF46609 1 84 2.75E-35 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS05640 05ffbd85142505ae298bbf93555ef2f0 194 Gene3D G3DSA:1.10.287.990 20 82 5.6E-24 T 23-04-2016 VV93_RS05640 05ffbd85142505ae298bbf93555ef2f0 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 23-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS05640 05ffbd85142505ae298bbf93555ef2f0 194 SUPERFAMILY SSF54719 84 193 7.2E-43 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS05640 05ffbd85142505ae298bbf93555ef2f0 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 1.3E-34 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS05640 05ffbd85142505ae298bbf93555ef2f0 194 PANTHER PTHR11404:SF8 1 194 5.4E-110 T 23-04-2016 VV93_RS05640 05ffbd85142505ae298bbf93555ef2f0 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.43E-21 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS05640 05ffbd85142505ae298bbf93555ef2f0 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.43E-21 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS05640 05ffbd85142505ae298bbf93555ef2f0 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.43E-21 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS05640 05ffbd85142505ae298bbf93555ef2f0 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.43E-21 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS05640 05ffbd85142505ae298bbf93555ef2f0 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.43E-21 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VV93_RS02190 1b38d68bae1637bd49347b5a647473aa 162 PANTHER PTHR33371 1 151 1.2E-42 T 23-04-2016 VV93_RS02190 1b38d68bae1637bd49347b5a647473aa 162 Pfam PF02470 MlaD protein 40 118 1.9E-19 T 23-04-2016 IPR003399 Mce/MlaD VV93_RS02190 1b38d68bae1637bd49347b5a647473aa 162 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 1.1E-54 T 23-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 VV93_RS06810 2b624a10620d46c3a4210c906443da83 542 PANTHER PTHR15535 110 242 3.6E-34 T 23-04-2016 VV93_RS06810 2b624a10620d46c3a4210c906443da83 542 Pfam PF08811 Protein of unknown function (DUF1800) 44 535 1.5E-98 T 23-04-2016 IPR014917 Protein of unknown function DUF1800 VV93_RS06810 2b624a10620d46c3a4210c906443da83 542 PANTHER PTHR15535:SF21 110 242 3.6E-34 T 23-04-2016 VV93_RS14055 4f5d3ffb43e983f931021b34df630f41 318 PANTHER PTHR10188 10 318 1.2E-130 T 23-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 VV93_RS14055 4f5d3ffb43e983f931021b34df630f41 318 PANTHER PTHR10188:SF24 10 318 1.2E-130 T 23-04-2016 VV93_RS14055 4f5d3ffb43e983f931021b34df630f41 318 SUPERFAMILY SSF56235 10 314 4.54E-98 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VV93_RS14055 4f5d3ffb43e983f931021b34df630f41 318 Pfam PF01112 Asparaginase 12 313 2.4E-111 T 23-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 VV93_RS14925 9f38b2d2646a8dff7b9847a20e25152f 278 Gene3D G3DSA:3.40.50.720 8 265 3.9E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS14925 9f38b2d2646a8dff7b9847a20e25152f 278 SUPERFAMILY SSF69572 7 264 4.58E-70 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VV93_RS14925 9f38b2d2646a8dff7b9847a20e25152f 278 Pfam PF00899 ThiF family 10 261 3.8E-54 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VV93_RS14925 9f38b2d2646a8dff7b9847a20e25152f 278 PANTHER PTHR10953:SF158 1 163 1.4E-88 T 23-04-2016 VV93_RS14925 9f38b2d2646a8dff7b9847a20e25152f 278 PANTHER PTHR10953:SF158 182 266 1.4E-88 T 23-04-2016 VV93_RS14925 9f38b2d2646a8dff7b9847a20e25152f 278 PANTHER PTHR10953 1 163 1.4E-88 T 23-04-2016 VV93_RS14925 9f38b2d2646a8dff7b9847a20e25152f 278 PANTHER PTHR10953 182 266 1.4E-88 T 23-04-2016 VV93_RS12560 6f688db713f5691265cb4b2fc4586998 562 SUPERFAMILY SSF160246 2 140 8.37E-33 T 23-04-2016 VV93_RS12560 6f688db713f5691265cb4b2fc4586998 562 Gene3D G3DSA:3.40.50.300 294 560 1.7E-97 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12560 6f688db713f5691265cb4b2fc4586998 562 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 38 141 2.4E-19 T 23-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 VV93_RS12560 6f688db713f5691265cb4b2fc4586998 562 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 560 1.1E-255 T 23-04-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 VV93_RS12560 6f688db713f5691265cb4b2fc4586998 562 PANTHER PTHR30258 4 561 3.0E-247 T 23-04-2016 VV93_RS12560 6f688db713f5691265cb4b2fc4586998 562 Pfam PF00437 Type II/IV secretion system protein 189 456 1.2E-84 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VV93_RS12560 6f688db713f5691265cb4b2fc4586998 562 Gene3D G3DSA:3.30.450.90 165 289 2.9E-51 T 23-04-2016 VV93_RS12560 6f688db713f5691265cb4b2fc4586998 562 PANTHER PTHR30258:SF1 4 561 3.0E-247 T 23-04-2016 VV93_RS12560 6f688db713f5691265cb4b2fc4586998 562 SUPERFAMILY SSF52540 170 559 1.78E-94 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12560 6f688db713f5691265cb4b2fc4586998 562 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 384 398 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VV93_RS13995 296911a542d8594d3417f249a43a4767 62 PANTHER PTHR37424 2 59 1.7E-19 T 23-04-2016 VV93_RS13995 296911a542d8594d3417f249a43a4767 62 PANTHER PTHR37424:SF1 2 59 1.7E-19 T 23-04-2016 VV93_RS13995 296911a542d8594d3417f249a43a4767 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 8.7E-13 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain VV93_RS00015 770181c6141896912fcbeb419fab2839 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 355 3.9E-38 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal VV93_RS00015 770181c6141896912fcbeb419fab2839 359 PANTHER PTHR32182:SF0 1 358 9.0E-74 T 23-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VV93_RS00015 770181c6141896912fcbeb419fab2839 359 PANTHER PTHR32182 1 358 9.0E-74 T 23-04-2016 VV93_RS00015 770181c6141896912fcbeb419fab2839 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 23-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VV93_RS00015 770181c6141896912fcbeb419fab2839 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 354 1.1E-121 T 23-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VV93_RS00015 770181c6141896912fcbeb419fab2839 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 98.939 T 23-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VV93_RS00015 770181c6141896912fcbeb419fab2839 359 SUPERFAMILY SSF52540 1 344 3.9E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00015 770181c6141896912fcbeb419fab2839 359 Gene3D G3DSA:3.40.50.300 1 172 5.9E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00015 770181c6141896912fcbeb419fab2839 359 Gene3D G3DSA:3.40.50.300 231 346 5.9E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00015 770181c6141896912fcbeb419fab2839 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 23-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VV93_RS04620 9c269bcc4881d0014e9ebd6fd668f785 385 SUPERFAMILY SSF64518 1 384 9.81E-97 T 23-04-2016 VV93_RS04620 9c269bcc4881d0014e9ebd6fd668f785 385 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.4E-42 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS04620 9c269bcc4881d0014e9ebd6fd668f785 385 PANTHER PTHR30244 2 384 1.6E-150 T 23-04-2016 VV93_RS04620 9c269bcc4881d0014e9ebd6fd668f785 385 PRINTS PR00207 Flagellin signature 37 54 1.0E-24 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV93_RS04620 9c269bcc4881d0014e9ebd6fd668f785 385 PRINTS PR00207 Flagellin signature 76 95 1.0E-24 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV93_RS04620 9c269bcc4881d0014e9ebd6fd668f785 385 PRINTS PR00207 Flagellin signature 111 134 1.0E-24 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV93_RS04620 9c269bcc4881d0014e9ebd6fd668f785 385 PANTHER PTHR30244:SF1 2 384 1.6E-150 T 23-04-2016 VV93_RS04620 9c269bcc4881d0014e9ebd6fd668f785 385 Gene3D G3DSA:1.20.1330.10 54 171 4.1E-59 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS04620 9c269bcc4881d0014e9ebd6fd668f785 385 Gene3D G3DSA:1.20.1330.10 286 339 4.1E-59 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS04620 9c269bcc4881d0014e9ebd6fd668f785 385 Pfam PF00700 Bacterial flagellin C-terminal helical region 298 383 1.6E-26 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV93_RS04620 9c269bcc4881d0014e9ebd6fd668f785 385 Pfam PF07196 Flagellin hook IN motif 209 252 1.9E-8 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VV93_RS04300 4852162f490058f4b291b0c98bb2f9a3 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 1.3E-37 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VV93_RS04300 4852162f490058f4b291b0c98bb2f9a3 154 Gene3D G3DSA:3.40.390.30 12 152 3.3E-50 T 23-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 VV93_RS04300 4852162f490058f4b291b0c98bb2f9a3 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.029 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VV93_RS04300 4852162f490058f4b291b0c98bb2f9a3 154 SUPERFAMILY SSF55486 5 149 1.42E-48 T 23-04-2016 VV93_RS04300 4852162f490058f4b291b0c98bb2f9a3 154 Pfam PF02130 Uncharacterized protein family UPF0054 21 142 2.2E-38 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VV93_RS04300 4852162f490058f4b291b0c98bb2f9a3 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 23-04-2016 IPR020549 Endoribonuclease YbeY, conserved site VV93_RS04300 4852162f490058f4b291b0c98bb2f9a3 154 PANTHER PTHR22881 1 153 4.8E-66 T 23-04-2016 VV93_RS17120 270a8cb0329fdc5bd330616b15b5526b 249 Gene3D G3DSA:1.10.3720.10 6 177 5.0E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS17120 270a8cb0329fdc5bd330616b15b5526b 249 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 12 176 2.7E-9 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS17120 270a8cb0329fdc5bd330616b15b5526b 249 SUPERFAMILY SSF161098 2 176 2.62E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS17120 270a8cb0329fdc5bd330616b15b5526b 249 PANTHER PTHR30183 2 249 2.5E-102 T 23-04-2016 VV93_RS17120 270a8cb0329fdc5bd330616b15b5526b 249 PANTHER PTHR30183:SF8 2 249 2.5E-102 T 23-04-2016 VV93_RS01230 4e3d6b4687d0f4ae374546fafddebdaf 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 3.4E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS01230 4e3d6b4687d0f4ae374546fafddebdaf 347 Gene3D G3DSA:1.10.3720.10 136 339 5.8E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS01230 4e3d6b4687d0f4ae374546fafddebdaf 347 PANTHER PTHR30325 1 347 2.2E-115 T 23-04-2016 VV93_RS01230 4e3d6b4687d0f4ae374546fafddebdaf 347 SUPERFAMILY SSF161098 139 325 2.75E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS02765 5bb5a87b71261f41fcd7008530b46831 196 PANTHER PTHR30390:SF5 1 196 2.4E-118 T 23-04-2016 VV93_RS02765 5bb5a87b71261f41fcd7008530b46831 196 Pfam PF13580 SIS domain 9 144 3.6E-35 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VV93_RS02765 5bb5a87b71261f41fcd7008530b46831 196 PANTHER PTHR30390 1 196 2.4E-118 T 23-04-2016 VV93_RS02765 5bb5a87b71261f41fcd7008530b46831 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.141 T 23-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 VV93_RS02765 5bb5a87b71261f41fcd7008530b46831 196 SUPERFAMILY SSF53697 1 191 2.83E-56 T 23-04-2016 VV93_RS02765 5bb5a87b71261f41fcd7008530b46831 196 Gene3D G3DSA:3.40.50.10490 2 191 1.1E-58 T 23-04-2016 VV93_RS06120 b658fe154a73a65e99ee7e8e4dbeb2ca 56 SUPERFAMILY SSF57829 2 55 1.1E-17 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 VV93_RS06120 b658fe154a73a65e99ee7e8e4dbeb2ca 56 PANTHER PTHR35534 1 56 2.8E-28 T 23-04-2016 VV93_RS06120 b658fe154a73a65e99ee7e8e4dbeb2ca 56 Pfam PF01783 Ribosomal L32p protein family 2 56 3.1E-19 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 VV93_RS06120 b658fe154a73a65e99ee7e8e4dbeb2ca 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.665 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 VV93_RS06120 b658fe154a73a65e99ee7e8e4dbeb2ca 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.7E-19 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 VV93_RS05010 e35e3cdfdb061f7b27d2ce7fd4bc2178 565 Gene3D G3DSA:3.40.50.980 217 379 3.1E-41 T 23-04-2016 VV93_RS05010 e35e3cdfdb061f7b27d2ce7fd4bc2178 565 Gene3D G3DSA:3.30.300.30 458 556 8.0E-28 T 23-04-2016 VV93_RS05010 e35e3cdfdb061f7b27d2ce7fd4bc2178 565 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 23-04-2016 IPR020845 AMP-binding, conserved site VV93_RS05010 e35e3cdfdb061f7b27d2ce7fd4bc2178 565 PANTHER PTHR24096 11 153 6.0E-173 T 23-04-2016 VV93_RS05010 e35e3cdfdb061f7b27d2ce7fd4bc2178 565 PANTHER PTHR24096 176 554 6.0E-173 T 23-04-2016 VV93_RS05010 e35e3cdfdb061f7b27d2ce7fd4bc2178 565 SUPERFAMILY SSF56801 14 553 1.07E-150 T 23-04-2016 VV93_RS05010 e35e3cdfdb061f7b27d2ce7fd4bc2178 565 Pfam PF00501 AMP-binding enzyme 29 461 1.6E-108 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VV93_RS05010 e35e3cdfdb061f7b27d2ce7fd4bc2178 565 Gene3D G3DSA:2.30.38.10 380 452 1.2E-30 T 23-04-2016 VV93_RS05010 e35e3cdfdb061f7b27d2ce7fd4bc2178 565 Gene3D G3DSA:3.40.50.980 24 151 2.7E-40 T 23-04-2016 VV93_RS05010 e35e3cdfdb061f7b27d2ce7fd4bc2178 565 Gene3D G3DSA:3.40.50.980 185 216 2.7E-40 T 23-04-2016 VV93_RS05010 e35e3cdfdb061f7b27d2ce7fd4bc2178 565 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 6.2E-18 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VV93_RS06890 12513114a3a37fedbffb17bc65387617 389 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 379 23.548 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VV93_RS06890 12513114a3a37fedbffb17bc65387617 389 Gene3D G3DSA:1.20.1530.10 5 379 6.4E-152 T 23-04-2016 IPR023171 Na/H antiporter domain VV93_RS06890 12513114a3a37fedbffb17bc65387617 389 PANTHER PTHR30341:SF0 1 387 1.3E-200 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VV93_RS06890 12513114a3a37fedbffb17bc65387617 389 Pfam PF06965 Na+/H+ antiporter 1 7 373 2.3E-145 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VV93_RS06890 12513114a3a37fedbffb17bc65387617 389 PANTHER PTHR30341 1 387 1.3E-200 T 23-04-2016 VV93_RS06890 12513114a3a37fedbffb17bc65387617 389 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 1.5E-188 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VV93_RS14745 28d959b0c109d3f3b452853b5afdd8e0 94 Pfam PF13358 DDE superfamily endonuclease 6 85 3.5E-18 T 23-04-2016 VV93_RS14755 28d959b0c109d3f3b452853b5afdd8e0 94 Pfam PF13358 DDE superfamily endonuclease 6 85 3.5E-18 T 23-04-2016 VV93_RS00190 0ef3af91017ed0f13876e481ae59e384 368 SUPERFAMILY SSF111369 58 273 5.1E-42 T 23-04-2016 VV93_RS00190 0ef3af91017ed0f13876e481ae59e384 368 Gene3D G3DSA:2.40.50.100 70 102 1.3E-15 T 23-04-2016 VV93_RS00190 0ef3af91017ed0f13876e481ae59e384 368 Gene3D G3DSA:2.40.50.100 163 194 1.3E-15 T 23-04-2016 VV93_RS00190 0ef3af91017ed0f13876e481ae59e384 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 1.5E-75 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VV93_RS00190 0ef3af91017ed0f13876e481ae59e384 368 PANTHER PTHR30469 1 364 3.5E-148 T 23-04-2016 VV93_RS00190 0ef3af91017ed0f13876e481ae59e384 368 PANTHER PTHR30469:SF11 1 364 3.5E-148 T 23-04-2016 VV93_RS00190 0ef3af91017ed0f13876e481ae59e384 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 269 1.6E-27 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 SUPERFAMILY SSF50249 268 362 2.26E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 Pfam PF00575 S1 RNA binding domain 26 93 9.1E-8 T 23-04-2016 IPR003029 S1 domain GO:0003676 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 Pfam PF00575 S1 RNA binding domain 284 356 1.4E-20 T 23-04-2016 IPR003029 S1 domain GO:0003676 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 Pfam PF00575 S1 RNA binding domain 197 269 3.2E-21 T 23-04-2016 IPR003029 S1 domain GO:0003676 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 Pfam PF00575 S1 RNA binding domain 371 442 6.9E-16 T 23-04-2016 IPR003029 S1 domain GO:0003676 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 Pfam PF00575 S1 RNA binding domain 111 182 2.1E-21 T 23-04-2016 IPR003029 S1 domain GO:0003676 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 SUPERFAMILY SSF50249 111 199 1.12E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 PRINTS PR00681 Ribosomal protein S1 signature 212 231 9.8E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 PRINTS PR00681 Ribosomal protein S1 signature 48 65 9.8E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 PRINTS PR00681 Ribosomal protein S1 signature 134 155 9.8E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 PRINTS PR00681 Ribosomal protein S1 signature 30 46 9.8E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 PRINTS PR00681 Ribosomal protein S1 signature 6 25 9.8E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 PRINTS PR00681 Ribosomal protein S1 signature 77 97 9.8E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 PRINTS PR00681 Ribosomal protein S1 signature 252 270 9.8E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 SUPERFAMILY SSF50249 177 282 4.5E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 PANTHER PTHR10724:SF6 6 436 7.2E-239 T 23-04-2016 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 PANTHER PTHR10724 6 436 7.2E-239 T 23-04-2016 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 SMART SM00316 284 356 2.3E-21 T 23-04-2016 IPR022967 RNA-binding domain, S1 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 SMART SM00316 112 182 7.7E-28 T 23-04-2016 IPR022967 RNA-binding domain, S1 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 SMART SM00316 25 93 1.8E-7 T 23-04-2016 IPR022967 RNA-binding domain, S1 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 SMART SM00316 371 442 1.1E-20 T 23-04-2016 IPR022967 RNA-binding domain, S1 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 SMART SM00316 197 269 8.1E-27 T 23-04-2016 IPR022967 RNA-binding domain, S1 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 SUPERFAMILY SSF50249 10 96 5.22E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 2 442 5.1E-203 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 Gene3D G3DSA:2.40.50.140 17 94 1.4E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 Gene3D G3DSA:2.40.50.140 114 200 8.7E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 Gene3D G3DSA:2.40.50.140 201 284 3.9E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 SUPERFAMILY SSF50249 351 461 5.74E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 Gene3D G3DSA:2.40.50.140 285 364 2.4E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS21050 c69119a44acdc0c0b409fd16b4ca69bf 478 Gene3D G3DSA:2.40.50.140 367 453 4.4E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS09475 84a4ecc9f3730c6f0169674afdc7d17e 238 PANTHER PTHR30231:SF11 12 226 1.2E-71 T 23-04-2016 VV93_RS09475 84a4ecc9f3730c6f0169674afdc7d17e 238 Pfam PF00929 Exonuclease 49 219 2.3E-15 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VV93_RS09475 84a4ecc9f3730c6f0169674afdc7d17e 238 PANTHER PTHR30231 12 226 1.2E-71 T 23-04-2016 VV93_RS09475 84a4ecc9f3730c6f0169674afdc7d17e 238 SUPERFAMILY SSF53098 47 227 9.38E-39 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS09475 84a4ecc9f3730c6f0169674afdc7d17e 238 SMART SM00479 47 228 1.0E-19 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VV93_RS09475 84a4ecc9f3730c6f0169674afdc7d17e 238 Gene3D G3DSA:3.30.420.10 45 230 4.5E-46 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS06270 b2d914574c51cc81b7834fbedbd6862d 232 Gene3D G3DSA:3.20.20.70 3 229 9.6E-90 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS06270 b2d914574c51cc81b7834fbedbd6862d 232 PANTHER PTHR32119 1 226 2.2E-119 T 23-04-2016 VV93_RS06270 b2d914574c51cc81b7834fbedbd6862d 232 SUPERFAMILY SSF51366 1 228 4.08E-76 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VV93_RS06270 b2d914574c51cc81b7834fbedbd6862d 232 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 23-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VV93_RS06270 b2d914574c51cc81b7834fbedbd6862d 232 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 4.7E-57 T 23-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VV93_RS06270 b2d914574c51cc81b7834fbedbd6862d 232 SMART SM00934 5 226 2.6E-100 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VV93_RS06270 b2d914574c51cc81b7834fbedbd6862d 232 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 9.3E-54 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VV93_RS06270 b2d914574c51cc81b7834fbedbd6862d 232 PANTHER PTHR32119:SF2 1 226 2.2E-119 T 23-04-2016 VV93_RS06270 b2d914574c51cc81b7834fbedbd6862d 232 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.474 T 23-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VV93_RS03150 02f35510c1918f3841e4ed957ba17894 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 8.3E-32 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS03150 02f35510c1918f3841e4ed957ba17894 86 Gene3D G3DSA:1.20.58.110 3 86 2.2E-32 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS03150 02f35510c1918f3841e4ed957ba17894 86 SUPERFAMILY SSF46992 3 86 2.62E-32 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS03150 02f35510c1918f3841e4ed957ba17894 86 PANTHER PTHR33398 2 86 6.3E-39 T 23-04-2016 VV93_RS03150 02f35510c1918f3841e4ed957ba17894 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.607 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS03150 02f35510c1918f3841e4ed957ba17894 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 8.0E-36 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS03150 02f35510c1918f3841e4ed957ba17894 86 Pfam PF01649 Ribosomal protein S20 2 84 1.7E-28 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS07045 009000df490406b34d71311fc5cd9ee2 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 VV93_RS07045 009000df490406b34d71311fc5cd9ee2 367 Pfam PF01259 SAICAR synthetase 22 293 2.8E-48 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 VV93_RS07045 009000df490406b34d71311fc5cd9ee2 367 PANTHER PTHR11609 57 367 2.2E-76 T 23-04-2016 VV93_RS07045 009000df490406b34d71311fc5cd9ee2 367 PANTHER PTHR11609:SF1 57 367 2.2E-76 T 23-04-2016 VV93_RS07045 009000df490406b34d71311fc5cd9ee2 367 Gene3D G3DSA:3.30.470.20 136 282 3.8E-41 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VV93_RS07045 009000df490406b34d71311fc5cd9ee2 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 8.0E-214 T 23-04-2016 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 VV93_RS07045 009000df490406b34d71311fc5cd9ee2 367 Gene3D G3DSA:3.30.200.20 13 135 4.8E-33 T 23-04-2016 VV93_RS07045 009000df490406b34d71311fc5cd9ee2 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.724 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 VV93_RS07045 009000df490406b34d71311fc5cd9ee2 367 SUPERFAMILY SSF56104 14 344 7.52E-69 T 23-04-2016 VV93_RS15070 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 1.1E-62 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VV93_RS15070 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 PANTHER PTHR10458:SF10 1 170 2.3E-107 T 23-04-2016 VV93_RS15070 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 SUPERFAMILY SSF56420 3 165 3.79E-63 T 23-04-2016 IPR023635 Peptide deformylase VV93_RS15070 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.215 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VV93_RS15070 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 PANTHER PTHR10458 1 170 2.3E-107 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VV93_RS15070 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 PRINTS PR01576 Peptide deformylase signature 89 100 4.4E-38 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VV93_RS15070 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 PRINTS PR01576 Peptide deformylase signature 120 149 4.4E-38 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VV93_RS15070 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 PRINTS PR01576 Peptide deformylase signature 101 119 4.4E-38 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VV93_RS15070 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 PRINTS PR01576 Peptide deformylase signature 33 62 4.4E-38 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VV93_RS15070 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 Gene3D G3DSA:3.90.45.10 5 168 2.4E-64 T 23-04-2016 IPR023635 Peptide deformylase VV93_RS15070 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 PIRSF PIRSF004749 1 170 3.3E-57 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VV93_RS15070 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 Pfam PF01327 Polypeptide deformylase 4 152 1.8E-51 T 23-04-2016 IPR023635 Peptide deformylase VV93_RS06855 7edda951b1b23779491668eb2f1f32c1 400 SUPERFAMILY SSF103473 13 398 1.27E-64 T 23-04-2016 IPR020846 Major facilitator superfamily domain VV93_RS06855 7edda951b1b23779491668eb2f1f32c1 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 17 394 2.2E-118 T 23-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 VV93_RS06855 7edda951b1b23779491668eb2f1f32c1 400 Pfam PF07690 Major Facilitator Superfamily 24 363 1.2E-48 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV93_RS06855 7edda951b1b23779491668eb2f1f32c1 400 Gene3D G3DSA:1.20.1250.20 219 397 3.9E-9 T 23-04-2016 VV93_RS06855 7edda951b1b23779491668eb2f1f32c1 400 Gene3D G3DSA:1.20.1250.20 20 201 1.6E-29 T 23-04-2016 VV93_RS12995 e302b638d54fd031d9662cacf5f03309 384 Gene3D G3DSA:3.30.300.10 244 381 5.3E-70 T 23-04-2016 VV93_RS12995 e302b638d54fd031d9662cacf5f03309 384 Gene3D G3DSA:3.30.300.10 136 233 5.1E-44 T 23-04-2016 VV93_RS12995 e302b638d54fd031d9662cacf5f03309 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 7.6E-199 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VV93_RS12995 e302b638d54fd031d9662cacf5f03309 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VV93_RS12995 e302b638d54fd031d9662cacf5f03309 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 3.4E-46 T 23-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VV93_RS12995 e302b638d54fd031d9662cacf5f03309 384 SUPERFAMILY SSF55973 111 232 1.26E-52 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VV93_RS12995 e302b638d54fd031d9662cacf5f03309 384 Gene3D G3DSA:3.30.300.10 11 135 4.1E-50 T 23-04-2016 VV93_RS12995 e302b638d54fd031d9662cacf5f03309 384 PIRSF PIRSF000497 1 381 3.5E-175 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VV93_RS12995 e302b638d54fd031d9662cacf5f03309 384 SUPERFAMILY SSF55973 3 109 1.61E-47 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VV93_RS12995 e302b638d54fd031d9662cacf5f03309 384 SUPERFAMILY SSF55973 233 382 1.53E-70 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VV93_RS12995 e302b638d54fd031d9662cacf5f03309 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.375 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VV93_RS12995 e302b638d54fd031d9662cacf5f03309 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VV93_RS12995 e302b638d54fd031d9662cacf5f03309 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 5.5E-69 T 23-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VV93_RS12995 e302b638d54fd031d9662cacf5f03309 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 4.0E-43 T 23-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VV93_RS12995 e302b638d54fd031d9662cacf5f03309 384 PANTHER PTHR11964 1 376 1.2E-281 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VV93_RS00405 fab8fec2239d5e3d62ae2217eea148a0 405 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 64 392 4.1E-102 T 23-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX VV93_RS00405 fab8fec2239d5e3d62ae2217eea148a0 405 PANTHER PTHR38043 25 405 3.9E-82 T 23-04-2016 VV93_RS08140 2e1651cc1c24bb780517bec86285210a 275 Pfam PF02634 FdhD/NarQ family 35 266 4.2E-73 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 VV93_RS08140 2e1651cc1c24bb780517bec86285210a 275 Gene3D G3DSA:3.40.140.10 132 271 1.5E-51 T 23-04-2016 VV93_RS08140 2e1651cc1c24bb780517bec86285210a 275 PANTHER PTHR30592:SF2 1 275 4.2E-178 T 23-04-2016 VV93_RS08140 2e1651cc1c24bb780517bec86285210a 275 SUPERFAMILY SSF53927 15 266 4.51E-70 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VV93_RS08140 2e1651cc1c24bb780517bec86285210a 275 PIRSF PIRSF015626 1 271 1.2E-96 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 VV93_RS08140 2e1651cc1c24bb780517bec86285210a 275 Gene3D G3DSA:3.10.20.10 36 118 1.4E-15 T 23-04-2016 VV93_RS08140 2e1651cc1c24bb780517bec86285210a 275 PANTHER PTHR30592 1 275 4.2E-178 T 23-04-2016 VV93_RS15125 0986226045d40a547aee5614c76bf702 293 PANTHER PTHR10983 1 292 2.2E-133 T 23-04-2016 VV93_RS15125 0986226045d40a547aee5614c76bf702 293 PANTHER PTHR10983:SF15 1 292 2.2E-133 T 23-04-2016 VV93_RS15125 0986226045d40a547aee5614c76bf702 293 SUPERFAMILY SSF69593 15 289 2.22E-26 T 23-04-2016 VV93_RS15125 0986226045d40a547aee5614c76bf702 293 SMART SM00563 85 227 4.4E-20 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VV93_RS15125 0986226045d40a547aee5614c76bf702 293 Pfam PF01553 Acyltransferase 73 226 1.2E-14 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VV93_RS07830 19c7678048ed505b437e504a8907d8b4 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 2.2E-93 T 23-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VV93_RS07830 19c7678048ed505b437e504a8907d8b4 172 Gene3D G3DSA:3.10.129.10 2 169 1.5E-59 T 23-04-2016 IPR029069 HotDog domain VV93_RS07830 19c7678048ed505b437e504a8907d8b4 172 SUPERFAMILY SSF54637 4 169 1.31E-56 T 23-04-2016 IPR029069 HotDog domain VV93_RS07830 19c7678048ed505b437e504a8907d8b4 172 Pfam PF07977 FabA-like domain 29 158 2.7E-54 T 23-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VV93_RS07830 19c7678048ed505b437e504a8907d8b4 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.736 T 23-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VV93_RS05020 2ef1f61a1a39867d51883bf274e6000b 87 Gene3D G3DSA:3.30.1070.10 33 86 1.0E-21 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VV93_RS05020 2ef1f61a1a39867d51883bf274e6000b 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 18.817 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VV93_RS05020 2ef1f61a1a39867d51883bf274e6000b 87 PANTHER PTHR33404 1 84 1.2E-29 T 23-04-2016 VV93_RS05020 2ef1f61a1a39867d51883bf274e6000b 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 6.0E-23 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VV93_RS05020 2ef1f61a1a39867d51883bf274e6000b 87 SUPERFAMILY SSF55229 33 86 1.57E-16 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VV93_RS05020 2ef1f61a1a39867d51883bf274e6000b 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 7.4E-34 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VV93_RS01580 dd1f6cdcfb34abc07ec99d696c4dcf87 357 Gene3D G3DSA:3.20.20.70 2 288 2.2E-103 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS01580 dd1f6cdcfb34abc07ec99d696c4dcf87 357 Pfam PF03102 NeuB family 22 289 4.0E-99 T 23-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 VV93_RS01580 dd1f6cdcfb34abc07ec99d696c4dcf87 357 SUPERFAMILY SSF51269 295 356 4.4E-17 T 23-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal VV93_RS01580 dd1f6cdcfb34abc07ec99d696c4dcf87 357 Gene3D G3DSA:3.90.1210.10 304 355 6.3E-18 T 23-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal VV93_RS01580 dd1f6cdcfb34abc07ec99d696c4dcf87 357 SUPERFAMILY SSF51569 184 313 1.89E-78 T 23-04-2016 VV93_RS01580 dd1f6cdcfb34abc07ec99d696c4dcf87 357 SUPERFAMILY SSF51569 2 157 1.89E-78 T 23-04-2016 VV93_RS01580 dd1f6cdcfb34abc07ec99d696c4dcf87 357 PANTHER PTHR23416:SF62 192 312 8.1E-95 T 23-04-2016 VV93_RS01580 dd1f6cdcfb34abc07ec99d696c4dcf87 357 PANTHER PTHR23416:SF62 2 167 8.1E-95 T 23-04-2016 VV93_RS01580 dd1f6cdcfb34abc07ec99d696c4dcf87 357 PANTHER PTHR23416 192 312 8.1E-95 T 23-04-2016 VV93_RS01580 dd1f6cdcfb34abc07ec99d696c4dcf87 357 PANTHER PTHR23416 2 167 8.1E-95 T 23-04-2016 VV93_RS01580 dd1f6cdcfb34abc07ec99d696c4dcf87 357 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 2 355 1.7E-152 T 23-04-2016 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|KEGG: 00900+2.5.1.10|MetaCyc: PWY-5123|MetaCyc: PWY-6749|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7131|MetaCyc: PWY-7721|MetaCyc: PWY-7736 VV93_RS07765 c64c3e92c92670372e7e65f3de1d0bc5 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 23-04-2016 IPR000614 Free Met sulfoxide reductase conserved site VV93_RS07765 c64c3e92c92670372e7e65f3de1d0bc5 157 PANTHER PTHR21021 3 140 2.6E-52 T 23-04-2016 VV93_RS07765 c64c3e92c92670372e7e65f3de1d0bc5 157 Pfam PF13185 GAF domain 31 145 3.0E-8 T 23-04-2016 IPR003018 GAF domain GO:0005515 VV93_RS07765 c64c3e92c92670372e7e65f3de1d0bc5 157 SUPERFAMILY SSF55781 5 145 6.73E-39 T 23-04-2016 IPR029016 GAF domain-like VV93_RS07765 c64c3e92c92670372e7e65f3de1d0bc5 157 Gene3D G3DSA:3.30.450.40 4 151 1.1E-47 T 23-04-2016 IPR029016 GAF domain-like VV93_RS04730 e0671f1a6342b20be9617f2915d13581 183 PANTHER PTHR11124:SF14 1 176 1.1E-58 T 23-04-2016 VV93_RS04730 e0671f1a6342b20be9617f2915d13581 183 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 162 1.3E-25 T 23-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type VV93_RS04730 e0671f1a6342b20be9617f2915d13581 183 Gene3D G3DSA:3.60.21.10 2 165 1.2E-43 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like VV93_RS04730 e0671f1a6342b20be9617f2915d13581 183 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 169 9.8E-33 T 23-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 VV93_RS04730 e0671f1a6342b20be9617f2915d13581 183 PANTHER PTHR11124 1 176 1.1E-58 T 23-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 VV93_RS04730 e0671f1a6342b20be9617f2915d13581 183 SUPERFAMILY SSF56300 2 163 3.48E-36 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like VV93_RS12365 463ce0d1583e31707b0fb43efa4e2916 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 1.5E-17 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV93_RS12365 463ce0d1583e31707b0fb43efa4e2916 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 2.0E-23 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV93_RS12365 463ce0d1583e31707b0fb43efa4e2916 331 Gene3D G3DSA:3.40.50.300 9 265 2.9E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12365 463ce0d1583e31707b0fb43efa4e2916 331 Pfam PF00005 ABC transporter 35 192 3.1E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS12365 463ce0d1583e31707b0fb43efa4e2916 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS12365 463ce0d1583e31707b0fb43efa4e2916 331 SMART SM00382 43 241 1.2E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS12365 463ce0d1583e31707b0fb43efa4e2916 331 SUPERFAMILY SSF52540 9 262 5.59E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12365 463ce0d1583e31707b0fb43efa4e2916 331 PANTHER PTHR24220 11 328 3.7E-116 T 23-04-2016 VV93_RS12365 463ce0d1583e31707b0fb43efa4e2916 331 PANTHER PTHR24220:SF81 11 328 3.7E-116 T 23-04-2016 VV93_RS13510 9d73569a0cd62ee0ac51a4772efbc06f 188 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.2E-5 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS13510 9d73569a0cd62ee0ac51a4772efbc06f 188 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS13510 9d73569a0cd62ee0ac51a4772efbc06f 188 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 24 4.9E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS12875 5b585db78b176fddcc3a90499846dacd 206 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 137 189 1.9E-20 T 23-04-2016 IPR005573 Anti sigma-E protein RseA, C-terminal VV93_RS12875 5b585db78b176fddcc3a90499846dacd 206 SUPERFAMILY SSF89069 4 67 6.28E-21 T 23-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 VV93_RS12875 5b585db78b176fddcc3a90499846dacd 206 PIRSF PIRSF016938 1 194 3.6E-31 T 23-04-2016 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 VV93_RS12875 5b585db78b176fddcc3a90499846dacd 206 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 95 1.3E-34 T 23-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 VV93_RS12875 5b585db78b176fddcc3a90499846dacd 206 PANTHER PTHR38104 1 203 9.7E-59 T 23-04-2016 VV93_RS03645 525154eb80fcb189c94b8e9da752b16f 76 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 5 68 2.0E-31 T 23-04-2016 IPR010807 Protein of unknown function DUF1407 VV93_RS03645 525154eb80fcb189c94b8e9da752b16f 76 Gene3D G3DSA:2.10.290.10 3 70 4.7E-30 T 23-04-2016 IPR029037 YfgJ-like VV93_RS03645 525154eb80fcb189c94b8e9da752b16f 76 SUPERFAMILY SSF161187 3 70 3.4E-27 T 23-04-2016 IPR029037 YfgJ-like VV93_RS03645 525154eb80fcb189c94b8e9da752b16f 76 Pfam PF07191 zinc-ribbons 5 68 8.9E-28 T 23-04-2016 IPR010807 Protein of unknown function DUF1407 VV93_RS12880 2555b39087b717e6c11310b006ead891 192 Gene3D G3DSA:1.10.10.10 124 188 8.2E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS12880 2555b39087b717e6c11310b006ead891 192 SUPERFAMILY SSF88659 124 185 1.61E-17 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12880 2555b39087b717e6c11310b006ead891 192 Gene3D G3DSA:1.10.1740.10 2 110 9.9E-38 T 23-04-2016 VV93_RS12880 2555b39087b717e6c11310b006ead891 192 Pfam PF08281 Sigma-70, region 4 134 181 3.6E-18 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12880 2555b39087b717e6c11310b006ead891 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 2.8E-102 T 23-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12880 2555b39087b717e6c11310b006ead891 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12880 2555b39087b717e6c11310b006ead891 192 SUPERFAMILY SSF88946 2 107 4.24E-32 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12880 2555b39087b717e6c11310b006ead891 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 2.7E-33 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12880 2555b39087b717e6c11310b006ead891 192 PANTHER PTHR30173 1 187 5.8E-56 T 23-04-2016 VV93_RS12880 2555b39087b717e6c11310b006ead891 192 Pfam PF04542 Sigma-70 region 2 25 92 5.2E-18 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV93_RS12880 2555b39087b717e6c11310b006ead891 192 PANTHER PTHR30173:SF1 1 187 5.8E-56 T 23-04-2016 VV93_RS20790 6e22b3abf8685c910c3f7a783e653977 135 Gene3D G3DSA:2.120.10.90 24 135 1.1E-46 T 23-04-2016 VV93_RS20790 6e22b3abf8685c910c3f7a783e653977 135 SUPERFAMILY SSF101904 24 135 4.45E-36 T 23-04-2016 VV93_RS20790 6e22b3abf8685c910c3f7a783e653977 135 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 108 135 4.1E-5 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV93_RS20790 6e22b3abf8685c910c3f7a783e653977 135 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 26 52 1.3E-7 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV93_RS20790 6e22b3abf8685c910c3f7a783e653977 135 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 58 104 4.2E-15 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV93_RS04940 b8f1071d589ced5903ab846fd1778c49 1134 SUPERFAMILY SSF63829 379 559 2.62E-14 T 23-04-2016 VV93_RS04940 b8f1071d589ced5903ab846fd1778c49 1134 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1082 1123 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV93_RS04940 b8f1071d589ced5903ab846fd1778c49 1134 Gene3D G3DSA:1.10.10.60 1029 1081 5.7E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS04940 b8f1071d589ced5903ab846fd1778c49 1134 Gene3D G3DSA:1.10.10.60 1082 1126 2.0E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS04940 b8f1071d589ced5903ab846fd1778c49 1134 SUPERFAMILY SSF101898 210 434 3.92E-9 T 23-04-2016 VV93_RS04940 b8f1071d589ced5903ab846fd1778c49 1134 Pfam PF12833 Helix-turn-helix domain 1052 1127 5.9E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV93_RS04940 b8f1071d589ced5903ab846fd1778c49 1134 Gene3D G3DSA:2.120.10.30 507 549 7.7E-12 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like VV93_RS04940 b8f1071d589ced5903ab846fd1778c49 1134 Gene3D G3DSA:2.120.10.30 250 409 7.7E-12 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like VV93_RS04940 b8f1071d589ced5903ab846fd1778c49 1134 Gene3D G3DSA:2.120.10.30 445 446 7.7E-12 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like VV93_RS04940 b8f1071d589ced5903ab846fd1778c49 1134 PANTHER PTHR11019 1029 1126 3.8E-19 T 23-04-2016 VV93_RS04940 b8f1071d589ced5903ab846fd1778c49 1134 SMART SM00342 1045 1127 8.5E-25 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV93_RS04940 b8f1071d589ced5903ab846fd1778c49 1134 SUPERFAMILY SSF46689 1081 1128 1.21E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS00465 786064adf002ec9b6ae00caa0864cf5c 201 PANTHER PTHR21392:SF1 6 184 4.8E-44 T 23-04-2016 VV93_RS00465 786064adf002ec9b6ae00caa0864cf5c 201 Pfam PF03942 DTW domain 5 183 1.5E-42 T 23-04-2016 IPR005636 DTW VV93_RS00465 786064adf002ec9b6ae00caa0864cf5c 201 SMART SM01144 2 193 7.2E-57 T 23-04-2016 IPR005636 DTW VV93_RS00465 786064adf002ec9b6ae00caa0864cf5c 201 PANTHER PTHR21392 6 184 4.8E-44 T 23-04-2016 VV93_RS03855 0c0568c83336f725727a93f3bdb23c3e 143 Gene3D G3DSA:3.30.530.20 1 142 1.6E-46 T 23-04-2016 IPR023393 START-like domain VV93_RS03855 0c0568c83336f725727a93f3bdb23c3e 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 1.1E-30 T 23-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain VV93_RS03855 0c0568c83336f725727a93f3bdb23c3e 143 SUPERFAMILY SSF55961 1 142 1.37E-32 T 23-04-2016 VV93_RS03855 0c0568c83336f725727a93f3bdb23c3e 143 PANTHER PTHR12901 1 142 8.8E-67 T 23-04-2016 VV93_RS03855 0c0568c83336f725727a93f3bdb23c3e 143 PANTHER PTHR12901:SF7 1 142 8.8E-67 T 23-04-2016 VV93_RS14480 84b9cdf592fcbfa96925ed0af64758bd 435 PIRSF PIRSF004539 1 435 9.0E-178 T 23-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VV93_RS14480 84b9cdf592fcbfa96925ed0af64758bd 435 PANTHER PTHR36106 1 435 1.6E-292 T 23-04-2016 VV93_RS14480 84b9cdf592fcbfa96925ed0af64758bd 435 PANTHER PTHR36106:SF2 1 435 1.6E-292 T 23-04-2016 VV93_RS14480 84b9cdf592fcbfa96925ed0af64758bd 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 434 3.5E-180 T 23-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VV93_RS14480 84b9cdf592fcbfa96925ed0af64758bd 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 2.9E-145 T 23-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VV93_RS03410 ea446bade2ca95b800df74ef483d36a7 317 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 1 302 2.6E-74 T 23-04-2016 IPR011862 Phosphate binding protein GO:0006810 VV93_RS03410 ea446bade2ca95b800df74ef483d36a7 317 SUPERFAMILY SSF53850 33 314 7.65E-65 T 23-04-2016 VV93_RS03410 ea446bade2ca95b800df74ef483d36a7 317 PANTHER PTHR30570:SF5 34 315 1.1E-153 T 23-04-2016 VV93_RS03410 ea446bade2ca95b800df74ef483d36a7 317 Gene3D G3DSA:3.40.190.10 118 260 1.7E-33 T 23-04-2016 VV93_RS03410 ea446bade2ca95b800df74ef483d36a7 317 Pfam PF12849 PBP superfamily domain 33 289 1.2E-30 T 23-04-2016 IPR024370 PBP domain VV93_RS03410 ea446bade2ca95b800df74ef483d36a7 317 PANTHER PTHR30570 34 315 1.1E-153 T 23-04-2016 VV93_RS03410 ea446bade2ca95b800df74ef483d36a7 317 Gene3D G3DSA:3.40.190.10 37 115 2.1E-5 T 23-04-2016 VV93_RS03410 ea446bade2ca95b800df74ef483d36a7 317 Gene3D G3DSA:3.40.190.10 261 310 2.1E-5 T 23-04-2016 VV93_RS10630 14e18ab3b626e18386975f7b328612af 525 Gene3D G3DSA:3.40.720.10 7 373 2.1E-137 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VV93_RS10630 14e18ab3b626e18386975f7b328612af 525 Gene3D G3DSA:3.40.720.10 430 431 2.1E-137 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VV93_RS10630 14e18ab3b626e18386975f7b328612af 525 Gene3D G3DSA:3.40.720.10 466 522 2.1E-137 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VV93_RS10630 14e18ab3b626e18386975f7b328612af 525 PANTHER PTHR11596:SF5 13 420 3.1E-103 T 23-04-2016 VV93_RS10630 14e18ab3b626e18386975f7b328612af 525 PANTHER PTHR11596:SF5 475 502 3.1E-103 T 23-04-2016 VV93_RS10630 14e18ab3b626e18386975f7b328612af 525 Pfam PF00245 Alkaline phosphatase 26 503 5.1E-83 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VV93_RS10630 14e18ab3b626e18386975f7b328612af 525 SMART SM00098 27 415 1.4E-54 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VV93_RS10630 14e18ab3b626e18386975f7b328612af 525 ProSitePatterns PS00123 Alkaline phosphatase active site. 85 93 - T 23-04-2016 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VV93_RS10630 14e18ab3b626e18386975f7b328612af 525 PRINTS PR00113 Alkaline phosphatase signature 26 46 6.5E-38 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VV93_RS10630 14e18ab3b626e18386975f7b328612af 525 PRINTS PR00113 Alkaline phosphatase signature 267 296 6.5E-38 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VV93_RS10630 14e18ab3b626e18386975f7b328612af 525 PRINTS PR00113 Alkaline phosphatase signature 85 100 6.5E-38 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VV93_RS10630 14e18ab3b626e18386975f7b328612af 525 PRINTS PR00113 Alkaline phosphatase signature 166 176 6.5E-38 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VV93_RS10630 14e18ab3b626e18386975f7b328612af 525 PRINTS PR00113 Alkaline phosphatase signature 122 142 6.5E-38 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VV93_RS10630 14e18ab3b626e18386975f7b328612af 525 PANTHER PTHR11596 13 420 3.1E-103 T 23-04-2016 VV93_RS10630 14e18ab3b626e18386975f7b328612af 525 PANTHER PTHR11596 475 502 3.1E-103 T 23-04-2016 VV93_RS10630 14e18ab3b626e18386975f7b328612af 525 SUPERFAMILY SSF53649 11 401 3.45E-112 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VV93_RS10630 14e18ab3b626e18386975f7b328612af 525 SUPERFAMILY SSF53649 466 504 3.45E-112 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VV93_RS07685 20261527d0852c13185e75eaad28a78e 266 Gene3D G3DSA:3.40.190.10 106 214 1.7E-4 T 23-04-2016 VV93_RS07685 20261527d0852c13185e75eaad28a78e 266 SUPERFAMILY SSF53850 19 225 1.89E-18 T 23-04-2016 VV93_RS07685 20261527d0852c13185e75eaad28a78e 266 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 23 253 7.5E-53 T 23-04-2016 VV93_RS08800 cab2fced7ab247672264560200ac55af 237 Gene3D G3DSA:1.10.10.10 153 228 2.1E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS08800 cab2fced7ab247672264560200ac55af 237 Gene3D G3DSA:3.90.79.10 2 149 3.5E-24 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS08800 cab2fced7ab247672264560200ac55af 237 SUPERFAMILY SSF55811 2 156 9.69E-17 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS01035 7087796ae5f5ea13fd07c6eb2a269c5a 542 Gene3D G3DSA:3.90.228.20 352 540 6.3E-121 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VV93_RS01035 7087796ae5f5ea13fd07c6eb2a269c5a 542 Gene3D G3DSA:3.90.228.20 229 291 6.3E-121 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VV93_RS01035 7087796ae5f5ea13fd07c6eb2a269c5a 542 SUPERFAMILY SSF53795 230 541 3.14E-127 T 23-04-2016 VV93_RS01035 7087796ae5f5ea13fd07c6eb2a269c5a 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 18 539 54.967 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VV93_RS01035 7087796ae5f5ea13fd07c6eb2a269c5a 542 Gene3D G3DSA:3.40.449.10 24 228 1.2E-85 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VV93_RS01035 7087796ae5f5ea13fd07c6eb2a269c5a 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 7.9E-212 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VV93_RS01035 7087796ae5f5ea13fd07c6eb2a269c5a 542 SUPERFAMILY SSF68923 11 228 4.19E-87 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VV93_RS01035 7087796ae5f5ea13fd07c6eb2a269c5a 542 PIRSF PIRSF006294 4 541 6.0E-228 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VV93_RS01035 7087796ae5f5ea13fd07c6eb2a269c5a 542 PANTHER PTHR30031:SF0 5 542 0.0 T 23-04-2016 VV93_RS01035 7087796ae5f5ea13fd07c6eb2a269c5a 542 PANTHER PTHR30031 5 542 0.0 T 23-04-2016 VV93_RS01035 7087796ae5f5ea13fd07c6eb2a269c5a 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 23-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VV93_RS01035 7087796ae5f5ea13fd07c6eb2a269c5a 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 11 541 1.1E-274 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VV93_RS17635 db9c32ff148de575d863e3fecee56aaa 234 SUPERFAMILY SSF52540 4 109 4.43E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS17635 db9c32ff148de575d863e3fecee56aaa 234 PANTHER PTHR35894 1 223 3.0E-46 T 23-04-2016 VV93_RS17635 db9c32ff148de575d863e3fecee56aaa 234 PANTHER PTHR35894:SF2 1 223 3.0E-46 T 23-04-2016 VV93_RS15365 b9870d8c8b46ee84166185e20c6f07db 107 PANTHER PTHR33992 1 103 9.0E-34 T 23-04-2016 VV93_RS15365 b9870d8c8b46ee84166185e20c6f07db 107 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 45 59 - T 23-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 VV93_RS15365 b9870d8c8b46ee84166185e20c6f07db 107 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 102 5.8E-27 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VV93_RS15365 b9870d8c8b46ee84166185e20c6f07db 107 Pfam PF00825 Ribonuclease P 1 101 7.0E-31 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VV93_RS15365 b9870d8c8b46ee84166185e20c6f07db 107 Gene3D G3DSA:3.30.230.10 1 102 2.4E-31 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV93_RS15365 b9870d8c8b46ee84166185e20c6f07db 107 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 13.106 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VV93_RS15365 b9870d8c8b46ee84166185e20c6f07db 107 SUPERFAMILY SSF54211 1 103 8.6E-29 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS15365 b9870d8c8b46ee84166185e20c6f07db 107 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 5 93 3.0E-46 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VV93_RS04970 d437cfca2d61122366ae90099c62ba61 198 PANTHER PTHR37519 5 198 2.5E-83 T 23-04-2016 VV93_RS04970 d437cfca2d61122366ae90099c62ba61 198 Gene3D G3DSA:3.10.180.10 5 198 7.5E-72 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS04970 d437cfca2d61122366ae90099c62ba61 198 PANTHER PTHR37519:SF1 5 198 2.5E-83 T 23-04-2016 VV93_RS04970 d437cfca2d61122366ae90099c62ba61 198 Pfam PF06185 YecM protein 12 196 7.5E-71 T 23-04-2016 IPR010393 Protein of unknown function DUF991 VV93_RS04970 d437cfca2d61122366ae90099c62ba61 198 SUPERFAMILY SSF54593 3 197 2.25E-70 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS11435 a4754f0d95d5710f5f8fcf2cb6ba6d39 166 PANTHER PTHR35089:SF1 1 165 4.4E-47 T 23-04-2016 VV93_RS11435 a4754f0d95d5710f5f8fcf2cb6ba6d39 166 PANTHER PTHR35089 1 165 4.4E-47 T 23-04-2016 VV93_RS11435 a4754f0d95d5710f5f8fcf2cb6ba6d39 166 SMART SM00935 12 166 1.1E-39 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 VV93_RS11435 a4754f0d95d5710f5f8fcf2cb6ba6d39 166 PIRSF PIRSF002094 1 166 1.5E-38 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 VV93_RS11435 a4754f0d95d5710f5f8fcf2cb6ba6d39 166 SUPERFAMILY SSF111384 23 165 1.44E-29 T 23-04-2016 IPR024930 Skp domain VV93_RS11435 a4754f0d95d5710f5f8fcf2cb6ba6d39 166 Pfam PF03938 Outer membrane protein (OmpH-like) 10 164 2.8E-25 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 VV93_RS11435 a4754f0d95d5710f5f8fcf2cb6ba6d39 166 Gene3D G3DSA:3.30.910.20 14 65 5.5E-31 T 23-04-2016 VV93_RS11435 a4754f0d95d5710f5f8fcf2cb6ba6d39 166 Gene3D G3DSA:3.30.910.20 103 166 5.5E-31 T 23-04-2016 VV93_RS14015 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.7E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VV93_RS14015 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.7E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VV93_RS14015 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.7E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VV93_RS14015 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.7E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VV93_RS14015 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.7E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VV93_RS14015 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.7E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VV93_RS14015 5ffbb7826d3b77841f4d614d00008e61 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS14015 5ffbb7826d3b77841f4d614d00008e61 124 Pfam PF00164 Ribosomal protein S12/S23 5 123 4.6E-43 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS14015 5ffbb7826d3b77841f4d614d00008e61 124 PANTHER PTHR11652 1 116 4.5E-77 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS14015 5ffbb7826d3b77841f4d614d00008e61 124 PIRSF PIRSF002133 1 124 1.8E-54 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS14015 5ffbb7826d3b77841f4d614d00008e61 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.3E-71 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VV93_RS14015 5ffbb7826d3b77841f4d614d00008e61 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.98 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VV93_RS14015 5ffbb7826d3b77841f4d614d00008e61 124 Gene3D G3DSA:2.40.50.140 1 123 1.0E-65 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS14015 5ffbb7826d3b77841f4d614d00008e61 124 SUPERFAMILY SSF50249 3 123 2.4E-52 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS09380 4492d59ab17d31b5d8f90023342b0ac3 208 PANTHER PTHR12992 45 207 3.1E-50 T 23-04-2016 VV93_RS09380 4492d59ab17d31b5d8f90023342b0ac3 208 SUPERFAMILY SSF55811 42 197 2.57E-34 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS09380 4492d59ab17d31b5d8f90023342b0ac3 208 Gene3D G3DSA:3.90.79.10 39 202 1.7E-40 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS09380 4492d59ab17d31b5d8f90023342b0ac3 208 Pfam PF00293 NUDIX domain 45 162 3.6E-15 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VV93_RS03740 b7f196d24297df3a6195259211d1d5da 160 Gene3D G3DSA:1.10.260.40 85 147 1.2E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS03740 b7f196d24297df3a6195259211d1d5da 160 Pfam PF01381 Helix-turn-helix 88 139 8.3E-6 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV93_RS03740 b7f196d24297df3a6195259211d1d5da 160 SMART SM00530 87 143 9.3E-4 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV93_RS03740 b7f196d24297df3a6195259211d1d5da 160 SUPERFAMILY SSF47413 84 144 1.19E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS03210 60732ff4f1193bac1d7bd3426b7a4700 598 SUPERFAMILY SSF51735 399 493 1.58E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS03210 60732ff4f1193bac1d7bd3426b7a4700 598 PANTHER PTHR32507 1 589 4.0E-235 T 23-04-2016 VV93_RS03210 60732ff4f1193bac1d7bd3426b7a4700 598 PANTHER PTHR32507:SF0 1 589 4.0E-235 T 23-04-2016 VV93_RS03210 60732ff4f1193bac1d7bd3426b7a4700 598 Pfam PF00999 Sodium/hydrogen exchanger family 18 386 1.8E-34 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VV93_RS03210 60732ff4f1193bac1d7bd3426b7a4700 598 Pfam PF02254 TrkA-N domain 399 491 2.0E-7 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VV93_RS03210 60732ff4f1193bac1d7bd3426b7a4700 598 Gene3D G3DSA:3.40.50.720 399 495 7.8E-8 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS14685 114de7c9edc3e7d440f0c1d6396f4ca9 126 PANTHER PTHR33910 2 126 1.4E-29 T 23-04-2016 VV93_RS14685 114de7c9edc3e7d440f0c1d6396f4ca9 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 72 122 3.2E-17 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VV93_RS14685 114de7c9edc3e7d440f0c1d6396f4ca9 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 68 122 13.517 T 23-04-2016 IPR022943 Preprotein translocase subunit SecE VV93_RS14685 114de7c9edc3e7d440f0c1d6396f4ca9 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 6.2E-42 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VV93_RS14685 114de7c9edc3e7d440f0c1d6396f4ca9 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 6.2E-42 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VV93_RS14685 114de7c9edc3e7d440f0c1d6396f4ca9 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 6.2E-42 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VV93_RS14685 114de7c9edc3e7d440f0c1d6396f4ca9 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 6.2E-42 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VV93_RS14685 114de7c9edc3e7d440f0c1d6396f4ca9 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 23-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 VV93_RS14685 114de7c9edc3e7d440f0c1d6396f4ca9 126 Gene3D G3DSA:1.20.5.1030 65 122 7.3E-24 T 23-04-2016 VV93_RS14685 114de7c9edc3e7d440f0c1d6396f4ca9 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 72 122 1.2E-20 T 23-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 VV93_RS14685 114de7c9edc3e7d440f0c1d6396f4ca9 126 PANTHER PTHR33910:SF1 2 126 1.4E-29 T 23-04-2016 VV93_RS15160 a082c5b13b8179227eacd60312f8b4d2 509 Gene3D G3DSA:3.40.1020.10 336 508 4.8E-54 T 23-04-2016 VV93_RS15160 a082c5b13b8179227eacd60312f8b4d2 509 SUPERFAMILY SSF55021 332 418 5.8E-27 T 23-04-2016 VV93_RS15160 a082c5b13b8179227eacd60312f8b4d2 509 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 311 7.9E-83 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VV93_RS15160 a082c5b13b8179227eacd60312f8b4d2 509 SUPERFAMILY SSF55021 415 508 2.13E-26 T 23-04-2016 VV93_RS15160 a082c5b13b8179227eacd60312f8b4d2 509 PANTHER PTHR10314 3 363 6.4E-204 T 23-04-2016 VV93_RS15160 a082c5b13b8179227eacd60312f8b4d2 509 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 324 414 5.4E-26 T 23-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 VV93_RS15160 a082c5b13b8179227eacd60312f8b4d2 509 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 422 508 1.8E-26 T 23-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 VV93_RS15160 a082c5b13b8179227eacd60312f8b4d2 509 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 48 61 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VV93_RS15160 a082c5b13b8179227eacd60312f8b4d2 509 Gene3D G3DSA:3.40.50.1100 76 329 2.3E-83 T 23-04-2016 VV93_RS15160 a082c5b13b8179227eacd60312f8b4d2 509 PANTHER PTHR10314:SF30 3 363 6.4E-204 T 23-04-2016 VV93_RS15160 a082c5b13b8179227eacd60312f8b4d2 509 SUPERFAMILY SSF53686 10 360 3.67E-107 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VV93_RS15160 a082c5b13b8179227eacd60312f8b4d2 509 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 10 508 3.5E-251 T 23-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 VV93_RS01855 794c40a42c62236816d2d971cb084c39 105 Pfam PF00467 KOW motif 8 37 8.0E-6 T 23-04-2016 IPR005824 KOW VV93_RS01855 794c40a42c62236816d2d971cb084c39 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.924 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01855 794c40a42c62236816d2d971cb084c39 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 23-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01855 794c40a42c62236816d2d971cb084c39 105 Gene3D G3DSA:2.30.30.30 3 92 2.1E-22 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 VV93_RS01855 794c40a42c62236816d2d971cb084c39 105 SMART SM00739 4 31 3.4E-4 T 23-04-2016 IPR005824 KOW VV93_RS01855 794c40a42c62236816d2d971cb084c39 105 PANTHER PTHR12903 4 101 1.0E-46 T 23-04-2016 VV93_RS01855 794c40a42c62236816d2d971cb084c39 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.2E-39 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01855 794c40a42c62236816d2d971cb084c39 105 SUPERFAMILY SSF50104 4 101 8.6E-34 T 23-04-2016 IPR008991 Translation protein SH3-like domain VV93_RS01855 794c40a42c62236816d2d971cb084c39 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 2.9E-22 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS14410 40566c3f81bcfc8af1dc9e5ea87363c6 164 PANTHER PTHR33778 26 143 1.0E-26 T 23-04-2016 VV93_RS14410 40566c3f81bcfc8af1dc9e5ea87363c6 164 PRINTS PR01837 MgtC/SapB protein signature 68 90 1.7E-30 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VV93_RS14410 40566c3f81bcfc8af1dc9e5ea87363c6 164 PRINTS PR01837 MgtC/SapB protein signature 95 119 1.7E-30 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VV93_RS14410 40566c3f81bcfc8af1dc9e5ea87363c6 164 PRINTS PR01837 MgtC/SapB protein signature 22 41 1.7E-30 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VV93_RS14410 40566c3f81bcfc8af1dc9e5ea87363c6 164 PRINTS PR01837 MgtC/SapB protein signature 41 59 1.7E-30 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VV93_RS14410 40566c3f81bcfc8af1dc9e5ea87363c6 164 Pfam PF02308 MgtC family 19 141 6.1E-29 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VV93_RS03910 4b7be5ef9c91e72e602088976be2e2ba 299 PANTHER PTHR30477 20 268 4.4E-86 T 23-04-2016 VV93_RS03910 4b7be5ef9c91e72e602088976be2e2ba 299 Gene3D G3DSA:3.40.50.1980 7 165 2.2E-22 T 23-04-2016 VV93_RS03910 4b7be5ef9c91e72e602088976be2e2ba 299 PANTHER PTHR30477:SF11 20 268 4.4E-86 T 23-04-2016 VV93_RS03910 4b7be5ef9c91e72e602088976be2e2ba 299 SUPERFAMILY SSF53807 13 294 4.51E-50 T 23-04-2016 VV93_RS03910 4b7be5ef9c91e72e602088976be2e2ba 299 Gene3D G3DSA:3.40.50.1980 193 292 1.0E-4 T 23-04-2016 VV93_RS03910 4b7be5ef9c91e72e602088976be2e2ba 299 Pfam PF01297 Zinc-uptake complex component A periplasmic 31 291 4.1E-20 T 23-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VV93_RS05410 1ab42626d01af3bef875476f85dce974 361 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 32 316 2.2E-41 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VV93_RS05410 1ab42626d01af3bef875476f85dce974 361 PANTHER PTHR10314:SF126 6 350 1.3E-204 T 23-04-2016 VV93_RS05410 1ab42626d01af3bef875476f85dce974 361 PANTHER PTHR10314 6 350 1.3E-204 T 23-04-2016 VV93_RS05410 1ab42626d01af3bef875476f85dce974 361 SUPERFAMILY SSF53686 23 335 5.5E-70 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VV93_RS05410 1ab42626d01af3bef875476f85dce974 361 Gene3D G3DSA:3.40.50.1100 48 144 3.4E-24 T 23-04-2016 VV93_RS05410 1ab42626d01af3bef875476f85dce974 361 Gene3D G3DSA:3.40.50.1100 145 333 2.4E-35 T 23-04-2016 VV93_RS04290 a8f28e7b67ee3c60ec2022d939e72658 506 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.949 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 VV93_RS04290 a8f28e7b67ee3c60ec2022d939e72658 506 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 453 2.8E-98 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 VV93_RS04290 a8f28e7b67ee3c60ec2022d939e72658 506 Gene3D G3DSA:3.60.110.10 214 482 1.7E-24 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VV93_RS04290 a8f28e7b67ee3c60ec2022d939e72658 506 SUPERFAMILY SSF56317 214 486 2.35E-43 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VV93_RS04290 a8f28e7b67ee3c60ec2022d939e72658 506 PANTHER PTHR38686 1 506 6.6E-119 T 23-04-2016 VV93_RS04290 a8f28e7b67ee3c60ec2022d939e72658 506 Pfam PF00795 Carbon-nitrogen hydrolase 221 470 2.1E-37 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VV93_RS01260 675288c4c45f74aa0d073fdcea7ee545 141 PANTHER PTHR37819 2 139 2.7E-21 T 23-04-2016 VV93_RS01260 675288c4c45f74aa0d073fdcea7ee545 141 PANTHER PTHR37819:SF1 2 139 2.7E-21 T 23-04-2016 VV93_RS01260 675288c4c45f74aa0d073fdcea7ee545 141 PIRSF PIRSF029598 3 135 1.1E-40 T 23-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 VV93_RS01260 675288c4c45f74aa0d073fdcea7ee545 141 Pfam PF06146 Phosphate-starvation-inducible E 51 117 1.5E-14 T 23-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like VV93_RS02085 95476a537544956f00086d23ff845714 535 Gene3D G3DSA:1.10.3720.10 284 525 2.8E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS02085 95476a537544956f00086d23ff845714 535 Gene3D G3DSA:1.10.3720.10 25 258 4.9E-35 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS02085 95476a537544956f00086d23ff845714 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 364 512 3.9E-6 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS02085 95476a537544956f00086d23ff845714 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 65 257 1.7E-9 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS02085 95476a537544956f00086d23ff845714 535 SUPERFAMILY SSF161098 15 257 3.79E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS02085 95476a537544956f00086d23ff845714 535 SUPERFAMILY SSF161098 280 518 2.88E-29 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS02085 95476a537544956f00086d23ff845714 535 PANTHER PTHR30183:SF8 2 528 1.4E-213 T 23-04-2016 VV93_RS02085 95476a537544956f00086d23ff845714 535 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 516 4.4E-162 T 23-04-2016 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 VV93_RS02085 95476a537544956f00086d23ff845714 535 PANTHER PTHR30183 2 528 1.4E-213 T 23-04-2016 VV93_RS05550 0a874535ca9d9d5765ef09566c123d5f 491 PANTHER PTHR21248 46 476 1.5E-110 T 23-04-2016 VV93_RS05550 0a874535ca9d9d5765ef09566c123d5f 491 SUPERFAMILY SSF56024 8 228 4.19E-40 T 23-04-2016 VV93_RS05550 0a874535ca9d9d5765ef09566c123d5f 491 Gene3D G3DSA:3.30.870.10 47 229 4.4E-39 T 23-04-2016 VV93_RS05550 0a874535ca9d9d5765ef09566c123d5f 491 Gene3D G3DSA:3.30.870.10 270 474 3.1E-33 T 23-04-2016 VV93_RS05550 0a874535ca9d9d5765ef09566c123d5f 491 SUPERFAMILY SSF56024 267 435 1.33E-34 T 23-04-2016 VV93_RS05550 0a874535ca9d9d5765ef09566c123d5f 491 PANTHER PTHR21248:SF12 46 476 1.5E-110 T 23-04-2016 VV93_RS05550 0a874535ca9d9d5765ef09566c123d5f 491 Pfam PF13091 PLD-like domain 297 431 7.4E-22 T 23-04-2016 IPR025202 Phospholipase D-like domain VV93_RS05550 0a874535ca9d9d5765ef09566c123d5f 491 Pfam PF13091 PLD-like domain 63 210 2.9E-17 T 23-04-2016 IPR025202 Phospholipase D-like domain VV93_RS05550 0a874535ca9d9d5765ef09566c123d5f 491 SMART SM00155 151 178 0.3 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VV93_RS05550 0a874535ca9d9d5765ef09566c123d5f 491 SMART SM00155 385 412 0.025 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VV93_RS11220 fffda70eb22250b59fcd4e5b113b2314 141 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 15 141 1.5E-22 T 23-04-2016 IPR011979 Conserved hypothetical protein CHP02293 VV93_RS11220 fffda70eb22250b59fcd4e5b113b2314 141 Pfam PF09722 Protein of unknown function (DUF2384) 89 138 1.3E-12 T 23-04-2016 IPR024467 Domain of unknown function DUF2384 VV93_RS06345 a4fc7a799e91ad484a7962701988234f 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 23-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VV93_RS06345 a4fc7a799e91ad484a7962701988234f 164 Gene3D G3DSA:1.10.10.10 13 64 6.3E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS06345 a4fc7a799e91ad484a7962701988234f 164 SUPERFAMILY SSF54909 74 158 8.98E-22 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel VV93_RS06345 a4fc7a799e91ad484a7962701988234f 164 SUPERFAMILY SSF46785 12 70 2.17E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS06345 a4fc7a799e91ad484a7962701988234f 164 Gene3D G3DSA:3.30.70.920 65 161 1.1E-32 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VV93_RS06345 a4fc7a799e91ad484a7962701988234f 164 SMART SM00344 12 121 4.3E-55 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VV93_RS06345 a4fc7a799e91ad484a7962701988234f 164 PANTHER PTHR30154 4 162 9.8E-107 T 23-04-2016 VV93_RS06345 a4fc7a799e91ad484a7962701988234f 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VV93_RS06345 a4fc7a799e91ad484a7962701988234f 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VV93_RS06345 a4fc7a799e91ad484a7962701988234f 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VV93_RS06345 a4fc7a799e91ad484a7962701988234f 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.1E-22 T 23-04-2016 VV93_RS06345 a4fc7a799e91ad484a7962701988234f 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.5E-23 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VV93_RS06345 a4fc7a799e91ad484a7962701988234f 164 PANTHER PTHR30154:SF0 4 162 9.8E-107 T 23-04-2016 VV93_RS08600 b6934d3a14092cdb81ae4aedf16ca8b5 104 PANTHER PTHR36511:SF3 1 102 4.9E-47 T 23-04-2016 VV93_RS08600 b6934d3a14092cdb81ae4aedf16ca8b5 104 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 24 101 3.0E-8 T 23-04-2016 IPR032758 Antitoxin MqsA/igA-2 VV93_RS08600 b6934d3a14092cdb81ae4aedf16ca8b5 104 PANTHER PTHR36511 1 102 4.9E-47 T 23-04-2016 VV93_RS08600 b6934d3a14092cdb81ae4aedf16ca8b5 104 Gene3D G3DSA:1.10.260.40 44 96 8.9E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS08600 b6934d3a14092cdb81ae4aedf16ca8b5 104 SUPERFAMILY SSF47413 43 90 2.25E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS09455 a75ed5f23569d520eb68e2cb8a8c175d 148 Gene3D G3DSA:1.10.3210.10 1 135 5.7E-13 T 23-04-2016 IPR006674 HD domain VV93_RS09455 a75ed5f23569d520eb68e2cb8a8c175d 148 SUPERFAMILY SSF109604 1 130 6.98E-24 T 23-04-2016 VV93_RS09455 a75ed5f23569d520eb68e2cb8a8c175d 148 Pfam PF13487 HD domain 15 84 7.9E-19 T 23-04-2016 VV93_RS06275 d8aed1e525ff0e47c677f0806fbc24ed 332 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 123 329 7.6E-32 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06275 d8aed1e525ff0e47c677f0806fbc24ed 332 PANTHER PTHR30465 1 330 2.1E-110 T 23-04-2016 VV93_RS06275 d8aed1e525ff0e47c677f0806fbc24ed 332 Gene3D G3DSA:1.10.3720.10 100 319 2.3E-14 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06275 d8aed1e525ff0e47c677f0806fbc24ed 332 PANTHER PTHR30465:SF66 1 330 2.1E-110 T 23-04-2016 VV93_RS06275 d8aed1e525ff0e47c677f0806fbc24ed 332 SUPERFAMILY SSF161098 100 312 5.49E-14 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06610 dff5c822ba6199f06b6eab45ad648008 329 Pfam PF13609 Gram-negative porin 8 313 2.1E-25 T 23-04-2016 VV93_RS06610 dff5c822ba6199f06b6eab45ad648008 329 SUPERFAMILY SSF56935 44 329 3.66E-20 T 23-04-2016 VV93_RS06610 dff5c822ba6199f06b6eab45ad648008 329 Gene3D G3DSA:2.40.160.10 43 318 1.2E-16 T 23-04-2016 IPR023614 Porin domain VV93_RS11100 d9690103e013d76576729b65bd814a1e 158 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 1.9E-54 T 23-04-2016 IPR021318 Protein of unknown function DUF2919 VV93_RS13970 da3a5e5438127dd779ec1b58327ddc29 140 PANTHER PTHR34980 1 138 1.9E-26 T 23-04-2016 VV93_RS13970 da3a5e5438127dd779ec1b58327ddc29 140 PANTHER PTHR34980:SF1 1 138 1.9E-26 T 23-04-2016 VV93_RS13970 da3a5e5438127dd779ec1b58327ddc29 140 Pfam PF05656 Protein of unknown function (DUF805) 8 138 2.9E-21 T 23-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 VV93_RS10595 a3fe77526f258c3b96b166f6463b19b1 350 Gene3D G3DSA:3.30.70.270 197 343 3.5E-36 T 23-04-2016 VV93_RS10595 a3fe77526f258c3b96b166f6463b19b1 350 SMART SM00267 184 344 6.1E-45 T 23-04-2016 IPR000160 GGDEF domain VV93_RS10595 a3fe77526f258c3b96b166f6463b19b1 350 SUPERFAMILY SSF55073 200 343 1.96E-34 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS10595 a3fe77526f258c3b96b166f6463b19b1 350 PANTHER PTHR10799 35 183 2.0E-19 T 23-04-2016 VV93_RS10595 a3fe77526f258c3b96b166f6463b19b1 350 PANTHER PTHR10799 221 339 2.0E-19 T 23-04-2016 VV93_RS10595 a3fe77526f258c3b96b166f6463b19b1 350 PANTHER PTHR10799:SF750 221 339 2.0E-19 T 23-04-2016 VV93_RS10595 a3fe77526f258c3b96b166f6463b19b1 350 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 191 343 3.8E-34 T 23-04-2016 IPR000160 GGDEF domain VV93_RS10595 a3fe77526f258c3b96b166f6463b19b1 350 PANTHER PTHR10799:SF750 35 183 2.0E-19 T 23-04-2016 VV93_RS10595 a3fe77526f258c3b96b166f6463b19b1 350 Pfam PF00990 Diguanylate cyclase, GGDEF domain 196 339 2.8E-34 T 23-04-2016 IPR000160 GGDEF domain VV93_RS04990 ef6f023752df95fd339344d8d6d79542 233 PANTHER PTHR11735:SF11 1 138 5.7E-60 T 23-04-2016 VV93_RS04990 ef6f023752df95fd339344d8d6d79542 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 2.3E-69 T 23-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 VV93_RS04990 ef6f023752df95fd339344d8d6d79542 233 Pfam PF00814 Glycoprotease family 30 227 1.2E-31 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VV93_RS04990 ef6f023752df95fd339344d8d6d79542 233 PANTHER PTHR11735 1 138 5.7E-60 T 23-04-2016 VV93_RS04990 ef6f023752df95fd339344d8d6d79542 233 SUPERFAMILY SSF53067 4 106 3.37E-31 T 23-04-2016 VV93_RS04990 ef6f023752df95fd339344d8d6d79542 233 SUPERFAMILY SSF53067 111 219 6.22E-29 T 23-04-2016 VV93_RS04990 ef6f023752df95fd339344d8d6d79542 233 Gene3D G3DSA:3.30.420.40 4 133 1.5E-46 T 23-04-2016 VV93_RS13065 fc577f56f67801cc438f7bfd77762b91 96 Gene3D G3DSA:3.30.1200.10 3 92 1.3E-28 T 23-04-2016 IPR003746 Protein of unknown function DUF167 VV93_RS13065 fc577f56f67801cc438f7bfd77762b91 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 9 91 6.7E-26 T 23-04-2016 IPR005228 Conserved hypothetical protein CHP00251 VV93_RS13065 fc577f56f67801cc438f7bfd77762b91 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 94 19.672 T 23-04-2016 IPR003746 Protein of unknown function DUF167 VV93_RS13065 fc577f56f67801cc438f7bfd77762b91 96 PANTHER PTHR13420 12 96 6.7E-23 T 23-04-2016 VV93_RS13065 fc577f56f67801cc438f7bfd77762b91 96 SUPERFAMILY SSF69786 3 96 3.66E-32 T 23-04-2016 IPR003746 Protein of unknown function DUF167 VV93_RS13065 fc577f56f67801cc438f7bfd77762b91 96 SMART SM01152 8 84 1.2E-34 T 23-04-2016 IPR003746 Protein of unknown function DUF167 VV93_RS13065 fc577f56f67801cc438f7bfd77762b91 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 82 2.4E-24 T 23-04-2016 IPR003746 Protein of unknown function DUF167 VV93_RS00375 5dd590d56622d5c7f77ad67fa81ea4e7 296 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 1.4E-73 T 23-04-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 VV93_RS00375 5dd590d56622d5c7f77ad67fa81ea4e7 296 SUPERFAMILY SSF103481 35 128 5.1E-5 T 23-04-2016 VV93_RS00375 5dd590d56622d5c7f77ad67fa81ea4e7 296 Pfam PF00892 EamA-like transporter family 138 276 2.0E-7 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VV93_RS00375 5dd590d56622d5c7f77ad67fa81ea4e7 296 SUPERFAMILY SSF103481 181 276 1.44E-5 T 23-04-2016 VV93_RS00375 5dd590d56622d5c7f77ad67fa81ea4e7 296 PANTHER PTHR22911:SF27 1 288 1.0E-62 T 23-04-2016 VV93_RS00375 5dd590d56622d5c7f77ad67fa81ea4e7 296 PANTHER PTHR22911 1 288 1.0E-62 T 23-04-2016 VV93_RS00775 d71d96a1d57f63fb556a7282dde6c1ef 129 Pfam PF13467 Ribbon-helix-helix domain 16 83 5.9E-24 T 23-04-2016 IPR027373 Ribbon-helix-helix domain VV93_RS05915 32abb384dec0b28f21796fa2cd9b2e32 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 4.6E-54 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VV93_RS05915 32abb384dec0b28f21796fa2cd9b2e32 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VV93_RS05915 32abb384dec0b28f21796fa2cd9b2e32 185 PANTHER PTHR14269:SF13 2 179 2.3E-92 T 23-04-2016 VV93_RS05915 32abb384dec0b28f21796fa2cd9b2e32 185 PANTHER PTHR14269 2 179 2.3E-92 T 23-04-2016 VV93_RS05915 32abb384dec0b28f21796fa2cd9b2e32 185 PIRSF PIRSF000847 1 184 1.5E-45 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VV93_RS05915 32abb384dec0b28f21796fa2cd9b2e32 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 2.8E-18 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VV93_RS12385 9dac352582b3029979687cb98ae96976 801 Gene3D G3DSA:2.60.420.10 723 785 1.3E-10 T 23-04-2016 VV93_RS12385 9dac352582b3029979687cb98ae96976 801 SUPERFAMILY SSF48208 273 800 4.21E-110 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 VV93_RS12385 9dac352582b3029979687cb98ae96976 801 Gene3D G3DSA:2.70.98.40 1 325 7.9E-102 T 23-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 VV93_RS12385 9dac352582b3029979687cb98ae96976 801 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 1.5E-208 T 23-04-2016 IPR033432 Glycosyl hydrolase 36, catalytic domain VV93_RS12385 9dac352582b3029979687cb98ae96976 801 PANTHER PTHR37469:SF1 419 801 0.0 T 23-04-2016 VV93_RS12385 9dac352582b3029979687cb98ae96976 801 PANTHER PTHR37469:SF1 1 393 0.0 T 23-04-2016 VV93_RS12385 9dac352582b3029979687cb98ae96976 801 SMART SM01068 1 63 9.9E-19 T 23-04-2016 IPR009342 Putative carbohydrate binding domain VV93_RS12385 9dac352582b3029979687cb98ae96976 801 Pfam PF06165 Glycosyltransferase family 36 21 267 1.1E-83 T 23-04-2016 IPR010383 Glycosyl hydrolase 94 VV93_RS12385 9dac352582b3029979687cb98ae96976 801 PANTHER PTHR37469 419 801 0.0 T 23-04-2016 VV93_RS12385 9dac352582b3029979687cb98ae96976 801 PANTHER PTHR37469 1 393 0.0 T 23-04-2016 VV93_RS12385 9dac352582b3029979687cb98ae96976 801 SUPERFAMILY SSF74650 1 269 1.44E-79 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VV93_RS04215 bcd21de3c25c21cd530fd7fa583c92b4 416 Gene3D G3DSA:3.40.640.10 37 283 9.9E-109 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS04215 bcd21de3c25c21cd530fd7fa583c92b4 416 PANTHER PTHR11680 1 415 0.0 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VV93_RS04215 bcd21de3c25c21cd530fd7fa583c92b4 416 PANTHER PTHR11680:SF9 1 415 0.0 T 23-04-2016 VV93_RS04215 bcd21de3c25c21cd530fd7fa583c92b4 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 23-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VV93_RS04215 bcd21de3c25c21cd530fd7fa583c92b4 416 Gene3D G3DSA:3.90.1150.10 284 415 2.3E-55 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS04215 bcd21de3c25c21cd530fd7fa583c92b4 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.414 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VV93_RS04215 bcd21de3c25c21cd530fd7fa583c92b4 416 PIRSF PIRSF000412 1 416 4.6E-169 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VV93_RS04215 bcd21de3c25c21cd530fd7fa583c92b4 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 4.1E-183 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VV93_RS04215 bcd21de3c25c21cd530fd7fa583c92b4 416 SUPERFAMILY SSF53383 6 415 5.44E-185 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS08920 f27ee4c4324fa5fc3131a763c8c142df 280 Hamap MF_00790 Lipase chaperone [lifO]. 1 275 17.047 T 23-04-2016 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 VV93_RS08920 f27ee4c4324fa5fc3131a763c8c142df 280 Pfam PF03280 Proteobacterial lipase chaperone protein 86 267 1.2E-43 T 23-04-2016 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 VV93_RS08920 f27ee4c4324fa5fc3131a763c8c142df 280 SUPERFAMILY SSF158855 34 278 7.98E-56 T 23-04-2016 VV93_RS15115 34f8b8512b51f00de2a2b68bbdb55d47 328 Gene3D G3DSA:3.30.200.20 37 107 8.6E-6 T 23-04-2016 VV93_RS15115 34f8b8512b51f00de2a2b68bbdb55d47 328 Pfam PF01636 Phosphotransferase enzyme family 34 253 3.1E-45 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase VV93_RS15115 34f8b8512b51f00de2a2b68bbdb55d47 328 Gene3D G3DSA:3.90.1200.10 108 326 2.7E-48 T 23-04-2016 VV93_RS15115 34f8b8512b51f00de2a2b68bbdb55d47 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.769 T 23-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 VV93_RS15115 34f8b8512b51f00de2a2b68bbdb55d47 328 PANTHER PTHR39573:SF1 2 328 1.3E-178 T 23-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 VV93_RS15115 34f8b8512b51f00de2a2b68bbdb55d47 328 SUPERFAMILY SSF56112 6 328 1.18E-90 T 23-04-2016 IPR011009 Protein kinase-like domain VV93_RS15115 34f8b8512b51f00de2a2b68bbdb55d47 328 PANTHER PTHR39573 2 328 1.3E-178 T 23-04-2016 VV93_RS01610 4a1c2c2ba922c79c5223fca6e02eb87b 386 Gene3D G3DSA:3.40.50.2000 201 360 8.9E-15 T 23-04-2016 VV93_RS01610 4a1c2c2ba922c79c5223fca6e02eb87b 386 Pfam PF00534 Glycosyl transferases group 1 197 361 1.0E-29 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 VV93_RS01610 4a1c2c2ba922c79c5223fca6e02eb87b 386 PANTHER PTHR12526 79 99 3.2E-33 T 23-04-2016 VV93_RS01610 4a1c2c2ba922c79c5223fca6e02eb87b 386 PANTHER PTHR12526 18 63 3.2E-33 T 23-04-2016 VV93_RS01610 4a1c2c2ba922c79c5223fca6e02eb87b 386 PANTHER PTHR12526 115 381 3.2E-33 T 23-04-2016 VV93_RS01610 4a1c2c2ba922c79c5223fca6e02eb87b 386 SUPERFAMILY SSF53756 1 377 4.55E-44 T 23-04-2016 VV93_RS13605 d50345d9227cec8aa626b45f2006ccab 373 PIRSF PIRSF000524 5 373 3.4E-112 T 23-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 VV93_RS13605 d50345d9227cec8aa626b45f2006ccab 373 Gene3D G3DSA:3.40.640.10 23 267 1.1E-58 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS13605 d50345d9227cec8aa626b45f2006ccab 373 Pfam PF00266 Aminotransferase class-V 13 356 6.0E-37 T 23-04-2016 IPR000192 Aminotransferase class V domain VV93_RS13605 d50345d9227cec8aa626b45f2006ccab 373 SUPERFAMILY SSF53383 9 371 1.14E-102 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS13605 d50345d9227cec8aa626b45f2006ccab 373 PANTHER PTHR21152 1 371 2.1E-131 T 23-04-2016 VV93_RS13605 d50345d9227cec8aa626b45f2006ccab 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VV93_RS13605 d50345d9227cec8aa626b45f2006ccab 373 Gene3D G3DSA:3.90.1150.10 268 372 3.5E-38 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS03895 7db9a315e2d5f63be1136a9408005e28 426 PANTHER PTHR11958:SF44 1 409 1.6E-122 T 23-04-2016 VV93_RS03895 7db9a315e2d5f63be1136a9408005e28 426 SUPERFAMILY SSF118215 5 406 1.15E-103 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS03895 7db9a315e2d5f63be1136a9408005e28 426 PANTHER PTHR11958 1 409 1.6E-122 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS03895 7db9a315e2d5f63be1136a9408005e28 426 Gene3D G3DSA:1.10.3860.10 3 408 2.8E-107 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS03895 7db9a315e2d5f63be1136a9408005e28 426 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 8.3E-37 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS03895 7db9a315e2d5f63be1136a9408005e28 426 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 8.3E-37 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS03895 7db9a315e2d5f63be1136a9408005e28 426 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 8.3E-37 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS03895 7db9a315e2d5f63be1136a9408005e28 426 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 8.3E-37 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS03895 7db9a315e2d5f63be1136a9408005e28 426 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 8.3E-37 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS03895 7db9a315e2d5f63be1136a9408005e28 426 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 8.3E-37 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS03895 7db9a315e2d5f63be1136a9408005e28 426 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 8.3E-37 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS03895 7db9a315e2d5f63be1136a9408005e28 426 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 8.3E-37 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS03895 7db9a315e2d5f63be1136a9408005e28 426 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 4.1E-114 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS14350 2ea49b1203d1254a3c547cd03f64d4f3 387 SUPERFAMILY SSF51261 160 385 5.18E-47 T 23-04-2016 IPR011055 Duplicated hybrid motif VV93_RS14350 2ea49b1203d1254a3c547cd03f64d4f3 387 PANTHER PTHR21666:SF213 46 385 2.7E-84 T 23-04-2016 VV93_RS14350 2ea49b1203d1254a3c547cd03f64d4f3 387 Pfam PF01551 Peptidase family M23 288 381 3.1E-24 T 23-04-2016 IPR016047 Peptidase M23 VV93_RS14350 2ea49b1203d1254a3c547cd03f64d4f3 387 PANTHER PTHR21666 46 385 2.7E-84 T 23-04-2016 VV93_RS14350 2ea49b1203d1254a3c547cd03f64d4f3 387 Gene3D G3DSA:2.70.70.10 244 385 3.0E-34 T 23-04-2016 VV93_RS20040 60113c2032ec5c1ad673579c078da97b 101 PANTHER PTHR32089 1 101 1.4E-13 T 23-04-2016 VV93_RS20040 60113c2032ec5c1ad673579c078da97b 101 SUPERFAMILY SSF58104 1 100 1.05E-8 T 23-04-2016 VV93_RS07080 ead6cfe02db8cdb42b2dd3eb44cdc754 342 Pfam PF02277 Phosphoribosyltransferase 2 340 5.7E-128 T 23-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VV93_RS07080 ead6cfe02db8cdb42b2dd3eb44cdc754 342 PANTHER PTHR21712 2 342 9.3E-111 T 23-04-2016 VV93_RS07080 ead6cfe02db8cdb42b2dd3eb44cdc754 342 Gene3D G3DSA:1.10.1610.10 2 66 1.9E-27 T 23-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VV93_RS07080 ead6cfe02db8cdb42b2dd3eb44cdc754 342 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 342 36.515 T 23-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VV93_RS07080 ead6cfe02db8cdb42b2dd3eb44cdc754 342 PANTHER PTHR21712:SF4 2 342 9.3E-111 T 23-04-2016 VV93_RS07080 ead6cfe02db8cdb42b2dd3eb44cdc754 342 Gene3D G3DSA:3.40.50.10210 67 323 3.4E-106 T 23-04-2016 VV93_RS07080 ead6cfe02db8cdb42b2dd3eb44cdc754 342 SUPERFAMILY SSF52733 3 341 1.18E-114 T 23-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VV93_RS07080 ead6cfe02db8cdb42b2dd3eb44cdc754 342 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 340 2.1E-128 T 23-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VV93_RS00845 c89844ea40f8890c214f1f3212a91ad1 148 SUPERFAMILY SSF54928 44 139 8.46E-27 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 VV93_RS00845 c89844ea40f8890c214f1f3212a91ad1 148 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 63 132 7.1E-18 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 VV93_RS00845 c89844ea40f8890c214f1f3212a91ad1 148 Gene3D G3DSA:3.30.70.330 51 138 4.5E-27 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 VV93_RS00845 c89844ea40f8890c214f1f3212a91ad1 148 SMART SM00360 62 134 1.1E-20 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 VV93_RS00845 c89844ea40f8890c214f1f3212a91ad1 148 PANTHER PTHR24012 53 140 1.0E-21 T 23-04-2016 VV93_RS14090 4868428f947285ec132b5c668f8c05cc 325 Pfam PF00561 alpha/beta hydrolase fold 61 301 6.3E-20 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VV93_RS14090 4868428f947285ec132b5c668f8c05cc 325 SUPERFAMILY SSF53474 31 299 2.63E-39 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS14090 4868428f947285ec132b5c668f8c05cc 325 Gene3D G3DSA:3.40.50.1820 53 300 2.6E-26 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS14090 4868428f947285ec132b5c668f8c05cc 325 PANTHER PTHR10794:SF46 1 321 5.0E-79 T 23-04-2016 VV93_RS14090 4868428f947285ec132b5c668f8c05cc 325 PIRSF PIRSF005211 1 324 9.3E-104 T 23-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- VV93_RS14090 4868428f947285ec132b5c668f8c05cc 325 PANTHER PTHR10794 1 321 5.0E-79 T 23-04-2016 VV93_RS02060 c027255cd32bf4257e3e4c1778a8e1e5 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.518 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VV93_RS02060 c027255cd32bf4257e3e4c1778a8e1e5 176 Gene3D G3DSA:3.90.80.10 4 175 2.0E-59 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VV93_RS02060 c027255cd32bf4257e3e4c1778a8e1e5 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VV93_RS02060 c027255cd32bf4257e3e4c1778a8e1e5 176 SUPERFAMILY SSF50324 3 174 1.96E-66 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VV93_RS02060 c027255cd32bf4257e3e4c1778a8e1e5 176 PANTHER PTHR10286 5 172 1.3E-75 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VV93_RS02060 c027255cd32bf4257e3e4c1778a8e1e5 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.1E-52 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VV93_RS06525 1391b638106201bff9506e5bb7131c6b 243 PANTHER PTHR34990:SF1 1 240 4.4E-112 T 23-04-2016 VV93_RS06525 1391b638106201bff9506e5bb7131c6b 243 Gene3D G3DSA:3.60.21.10 173 204 7.1E-21 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like VV93_RS06525 1391b638106201bff9506e5bb7131c6b 243 Gene3D G3DSA:3.60.21.10 1 125 7.1E-21 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like VV93_RS06525 1391b638106201bff9506e5bb7131c6b 243 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 122.774 T 23-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 VV93_RS06525 1391b638106201bff9506e5bb7131c6b 243 PANTHER PTHR34990 1 240 4.4E-112 T 23-04-2016 VV93_RS06525 1391b638106201bff9506e5bb7131c6b 243 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 6.6E-105 T 23-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 VV93_RS06525 1391b638106201bff9506e5bb7131c6b 243 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 8.6E-9 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VV93_RS06525 1391b638106201bff9506e5bb7131c6b 243 SUPERFAMILY SSF56300 1 223 4.49E-33 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like VV93_RS05500 93576ba7c60cae9fd9cf134edb8752f0 616 SUPERFAMILY SSF52096 209 284 8.7E-29 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS05500 93576ba7c60cae9fd9cf134edb8752f0 616 SUPERFAMILY SSF52096 39 178 8.7E-29 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS05500 93576ba7c60cae9fd9cf134edb8752f0 616 SUPERFAMILY SSF52096 324 439 2.03E-40 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS05500 93576ba7c60cae9fd9cf134edb8752f0 616 SUPERFAMILY SSF52096 467 529 2.03E-40 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS05500 93576ba7c60cae9fd9cf134edb8752f0 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 539 9.9E-50 T 23-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 VV93_RS05500 93576ba7c60cae9fd9cf134edb8752f0 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 3.9E-196 T 23-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VV93_RS05500 93576ba7c60cae9fd9cf134edb8752f0 616 Pfam PF01343 Peptidase family S49 138 295 2.7E-30 T 23-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VV93_RS05500 93576ba7c60cae9fd9cf134edb8752f0 616 Pfam PF01343 Peptidase family S49 391 541 3.3E-44 T 23-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VV93_RS05500 93576ba7c60cae9fd9cf134edb8752f0 616 PANTHER PTHR33209:SF1 1 613 1.1E-218 T 23-04-2016 VV93_RS05500 93576ba7c60cae9fd9cf134edb8752f0 616 PIRSF PIRSF001217 8 616 2.4E-235 T 23-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VV93_RS05500 93576ba7c60cae9fd9cf134edb8752f0 616 PANTHER PTHR33209 1 613 1.1E-218 T 23-04-2016 VV93_RS05500 93576ba7c60cae9fd9cf134edb8752f0 616 Gene3D G3DSA:3.90.226.10 217 312 1.3E-62 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS05500 93576ba7c60cae9fd9cf134edb8752f0 616 Gene3D G3DSA:3.90.226.10 322 431 1.9E-65 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS05500 93576ba7c60cae9fd9cf134edb8752f0 616 Gene3D G3DSA:3.90.226.10 468 552 1.9E-65 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS05500 93576ba7c60cae9fd9cf134edb8752f0 616 Gene3D G3DSA:3.90.226.10 29 174 1.3E-62 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS02100 18ba19946406e3aa3442ce467aeeed50 270 PANTHER PTHR30624 2 254 2.9E-83 T 23-04-2016 VV93_RS02100 18ba19946406e3aa3442ce467aeeed50 270 Pfam PF01523 Putative modulator of DNA gyrase 32 254 1.1E-32 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VV93_RS02100 18ba19946406e3aa3442ce467aeeed50 270 PANTHER PTHR30624:SF1 2 254 2.9E-83 T 23-04-2016 VV93_RS02100 18ba19946406e3aa3442ce467aeeed50 270 SUPERFAMILY SSF111283 12 257 9.29E-54 T 23-04-2016 VV93_RS02510 3b569cbca93eb2264d214bd487d3bbd5 143 PANTHER PTHR38978:SF2 2 143 1.1E-44 T 23-04-2016 VV93_RS02510 3b569cbca93eb2264d214bd487d3bbd5 143 PANTHER PTHR38978 2 143 1.1E-44 T 23-04-2016 VV93_RS02510 3b569cbca93eb2264d214bd487d3bbd5 143 Pfam PF10980 Protein of unknown function (DUF2787) 16 141 3.5E-43 T 23-04-2016 IPR021248 Protein of unknown function DUF2787 VV93_RS14810 2224fbc90489ee3262d14202ee1b3fcd 617 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 7.1E-162 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 VV93_RS14810 2224fbc90489ee3262d14202ee1b3fcd 617 PANTHER PTHR30108 1 461 6.3E-244 T 23-04-2016 VV93_RS14810 2224fbc90489ee3262d14202ee1b3fcd 617 SUPERFAMILY SSF143968 323 459 9.94E-51 T 23-04-2016 VV93_RS14810 2224fbc90489ee3262d14202ee1b3fcd 617 Gene3D G3DSA:3.40.1670.10 480 583 6.1E-27 T 23-04-2016 VV93_RS14810 2224fbc90489ee3262d14202ee1b3fcd 617 Gene3D G3DSA:3.40.1670.10 337 453 1.4E-47 T 23-04-2016 VV93_RS14810 2224fbc90489ee3262d14202ee1b3fcd 617 SUPERFAMILY SSF50475 3 322 1.45E-122 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 VV93_RS14810 2224fbc90489ee3262d14202ee1b3fcd 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 3.4E-159 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 VV93_RS14810 2224fbc90489ee3262d14202ee1b3fcd 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 480 568 4.3E-17 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 VV93_RS14810 2224fbc90489ee3262d14202ee1b3fcd 617 SUPERFAMILY SSF143968 480 615 1.28E-31 T 23-04-2016 VV93_RS14810 2224fbc90489ee3262d14202ee1b3fcd 617 PANTHER PTHR30108:SF1 1 461 6.3E-244 T 23-04-2016 VV93_RS14810 2224fbc90489ee3262d14202ee1b3fcd 617 Gene3D G3DSA:1.20.5.570 584 617 1.8E-16 T 23-04-2016 VV93_RS13045 fb94ce4335a824390915b33906938c9b 345 PANTHER PTHR30486 1 341 1.1E-195 T 23-04-2016 VV93_RS13045 fb94ce4335a824390915b33906938c9b 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VV93_RS13045 fb94ce4335a824390915b33906938c9b 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 333 1.4E-152 T 23-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 VV93_RS13045 fb94ce4335a824390915b33906938c9b 345 Gene3D G3DSA:3.40.50.300 100 338 1.2E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13045 fb94ce4335a824390915b33906938c9b 345 Pfam PF00437 Type II/IV secretion system protein 12 269 1.4E-45 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VV93_RS13045 fb94ce4335a824390915b33906938c9b 345 PANTHER PTHR30486:SF6 1 341 1.1E-195 T 23-04-2016 VV93_RS13045 fb94ce4335a824390915b33906938c9b 345 SUPERFAMILY SSF52540 5 335 1.59E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10585 abfe4da4b83874d8c6d66af033b049f2 623 Pfam PF00672 HAMP domain 273 343 2.9E-14 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS10585 abfe4da4b83874d8c6d66af033b049f2 623 PANTHER PTHR32089 3 623 9.9E-239 T 23-04-2016 VV93_RS10585 abfe4da4b83874d8c6d66af033b049f2 623 SUPERFAMILY SSF58104 314 621 1.7E-73 T 23-04-2016 VV93_RS10585 abfe4da4b83874d8c6d66af033b049f2 623 Gene3D G3DSA:3.30.450.20 139 269 1.1E-29 T 23-04-2016 VV93_RS10585 abfe4da4b83874d8c6d66af033b049f2 623 Gene3D G3DSA:1.10.287.950 376 593 7.0E-55 T 23-04-2016 VV93_RS10585 abfe4da4b83874d8c6d66af033b049f2 623 SUPERFAMILY SSF103190 98 184 1.18E-18 T 23-04-2016 IPR029151 Periplasmic sensor domain-like VV93_RS10585 abfe4da4b83874d8c6d66af033b049f2 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 432 618 1.0E-46 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS10585 abfe4da4b83874d8c6d66af033b049f2 623 SMART SM00304 292 346 1.4E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS10585 abfe4da4b83874d8c6d66af033b049f2 623 PANTHER PTHR32089:SF64 3 623 9.9E-239 T 23-04-2016 VV93_RS10585 abfe4da4b83874d8c6d66af033b049f2 623 Pfam PF02743 Cache domain 38 254 1.6E-29 T 23-04-2016 IPR033479 Double Cache domain 1 VV93_RS10585 abfe4da4b83874d8c6d66af033b049f2 623 SMART SM00283 361 622 1.7E-72 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS08335 cb08b0d49c7352f3a9a0bffef9fcb6ef 82 PANTHER PTHR33713 1 82 3.7E-41 T 23-04-2016 VV93_RS08335 cb08b0d49c7352f3a9a0bffef9fcb6ef 82 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 61 3.6E-5 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VV93_RS08335 cb08b0d49c7352f3a9a0bffef9fcb6ef 82 PANTHER PTHR33713:SF1 1 82 3.7E-41 T 23-04-2016 VV93_RS08335 cb08b0d49c7352f3a9a0bffef9fcb6ef 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 11 77 9.9E-9 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VV93_RS08335 cb08b0d49c7352f3a9a0bffef9fcb6ef 82 SUPERFAMILY SSF143120 12 68 2.35E-8 T 23-04-2016 VV93_RS03480 514550690b7f77fced144bbec3769ed1 301 PANTHER PTHR30346 3 301 2.8E-205 T 23-04-2016 VV93_RS03480 514550690b7f77fced144bbec3769ed1 301 SUPERFAMILY SSF46785 4 117 1.15E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS03480 514550690b7f77fced144bbec3769ed1 301 Gene3D G3DSA:3.40.190.10 96 198 4.2E-25 T 23-04-2016 VV93_RS03480 514550690b7f77fced144bbec3769ed1 301 Pfam PF03466 LysR substrate binding domain 95 299 5.8E-38 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS03480 514550690b7f77fced144bbec3769ed1 301 Gene3D G3DSA:3.40.190.10 199 268 1.3E-13 T 23-04-2016 VV93_RS03480 514550690b7f77fced144bbec3769ed1 301 PANTHER PTHR30346:SF10 3 301 2.8E-205 T 23-04-2016 VV93_RS03480 514550690b7f77fced144bbec3769ed1 301 SUPERFAMILY SSF53850 96 300 1.78E-35 T 23-04-2016 VV93_RS03480 514550690b7f77fced144bbec3769ed1 301 Gene3D G3DSA:1.10.10.10 6 84 1.5E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS03480 514550690b7f77fced144bbec3769ed1 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 1.0E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS03480 514550690b7f77fced144bbec3769ed1 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.3E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS03480 514550690b7f77fced144bbec3769ed1 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.3E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS03480 514550690b7f77fced144bbec3769ed1 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.3E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS14525 c1130aec27799337fab5d61dac1bcb1e 211 Pfam PF00929 Exonuclease 31 193 9.8E-20 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VV93_RS14525 c1130aec27799337fab5d61dac1bcb1e 211 PANTHER PTHR30231:SF7 1 202 2.5E-106 T 23-04-2016 VV93_RS14525 c1130aec27799337fab5d61dac1bcb1e 211 SUPERFAMILY SSF53098 27 198 1.77E-35 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS14525 c1130aec27799337fab5d61dac1bcb1e 211 PANTHER PTHR30231 1 202 2.5E-106 T 23-04-2016 VV93_RS14525 c1130aec27799337fab5d61dac1bcb1e 211 SMART SM00479 29 202 3.3E-24 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VV93_RS14525 c1130aec27799337fab5d61dac1bcb1e 211 Gene3D G3DSA:3.30.420.10 26 199 9.6E-36 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS08840 0cb5b8937ed493c6c44dc1f8b830485c 272 Pfam PF17131 Outer membrane lipoprotein-sorting protein 87 270 8.0E-65 T 23-04-2016 IPR033399 Putative outer membrane lipoprotein-sorting protein VV93_RS08840 0cb5b8937ed493c6c44dc1f8b830485c 272 Gene3D G3DSA:2.50.20.10 35 270 6.7E-82 T 23-04-2016 VV93_RS08840 0cb5b8937ed493c6c44dc1f8b830485c 272 SUPERFAMILY SSF89392 111 213 2.24E-5 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX VV93_RS11310 7e67f38a60d6f9a08c3eee363c7ff0a6 281 Pfam PF13230 Glutamine amidotransferases class-II 1 256 4.4E-113 T 23-04-2016 IPR026869 Putative glutamine amidotransferase type 2 VV93_RS11310 7e67f38a60d6f9a08c3eee363c7ff0a6 281 SUPERFAMILY SSF56235 2 253 1.12E-51 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VV93_RS11310 7e67f38a60d6f9a08c3eee363c7ff0a6 281 PANTHER PTHR11907:SF10 1 257 7.5E-131 T 23-04-2016 VV93_RS11310 7e67f38a60d6f9a08c3eee363c7ff0a6 281 Gene3D G3DSA:3.60.20.10 1 253 2.3E-68 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VV93_RS11310 7e67f38a60d6f9a08c3eee363c7ff0a6 281 PANTHER PTHR11907 1 257 7.5E-131 T 23-04-2016 VV93_RS04210 4530c97d350915a013bcdbde1886d6ea 199 PANTHER PTHR33545 1 198 3.6E-66 T 23-04-2016 VV93_RS04210 4530c97d350915a013bcdbde1886d6ea 199 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 2.5E-35 T 23-04-2016 IPR003740 Uncharacterised membrane protein YitT VV93_RS05140 77d754cbac0f41ef2f89faf4fd803748 84 SUPERFAMILY SSF47336 4 82 1.7E-19 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain VV93_RS05140 77d754cbac0f41ef2f89faf4fd803748 84 Hamap MF_01217 Acyl carrier protein [acpP]. 8 82 14.069 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 VV93_RS05140 77d754cbac0f41ef2f89faf4fd803748 84 Gene3D G3DSA:1.10.1200.10 4 82 1.1E-19 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain VV93_RS05140 77d754cbac0f41ef2f89faf4fd803748 84 Pfam PF00550 Phosphopantetheine attachment site 11 78 2.6E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 6.4E-52 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 6.4E-52 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 6.4E-52 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 6.4E-52 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 6.4E-52 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 Gene3D G3DSA:1.10.520.10 47 201 1.8E-77 T 23-04-2016 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 Gene3D G3DSA:1.10.520.10 702 723 4.8E-56 T 23-04-2016 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 Gene3D G3DSA:1.10.520.10 239 251 1.8E-77 T 23-04-2016 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 Gene3D G3DSA:1.10.520.10 434 578 4.8E-56 T 23-04-2016 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 PANTHER PTHR30555 1 723 0.0 T 23-04-2016 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 2.4E-18 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 2.4E-18 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 2.4E-18 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 2.4E-18 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 2.4E-18 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 723 0.0 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 23-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 Gene3D G3DSA:1.10.420.10 579 699 1.8E-44 T 23-04-2016 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 PANTHER PTHR30555:SF0 1 723 0.0 T 23-04-2016 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 SUPERFAMILY SSF48113 432 722 4.42E-112 T 23-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 SUPERFAMILY SSF48113 19 431 5.89E-153 T 23-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 Gene3D G3DSA:1.10.420.10 310 409 3.6E-47 T 23-04-2016 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 Gene3D G3DSA:1.10.420.10 252 274 3.6E-47 T 23-04-2016 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 Hamap MF_01961 Catalase-peroxidase [katG]. 7 723 39.98 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 Pfam PF00141 Peroxidase 405 698 1.4E-37 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VV93_RS07240 2fb6623f0cf0180f13320b680d200ecc 723 Pfam PF00141 Peroxidase 71 398 1.2E-52 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VV93_RS11270 8e6bed86bf8fb1f41e4614bccb90bf1a 116 PANTHER PTHR30041:SF4 1 116 5.0E-63 T 23-04-2016 VV93_RS11270 8e6bed86bf8fb1f41e4614bccb90bf1a 116 Gene3D G3DSA:3.40.30.10 1 116 2.0E-48 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS11270 8e6bed86bf8fb1f41e4614bccb90bf1a 116 PANTHER PTHR30041 1 116 5.0E-63 T 23-04-2016 VV93_RS11270 8e6bed86bf8fb1f41e4614bccb90bf1a 116 Pfam PF03960 ArsC family 6 115 1.3E-19 T 23-04-2016 IPR006660 Arsenate reductase-like VV93_RS11270 8e6bed86bf8fb1f41e4614bccb90bf1a 116 SUPERFAMILY SSF52833 2 116 3.17E-36 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS11270 8e6bed86bf8fb1f41e4614bccb90bf1a 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 1.3E-46 T 23-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 VV93_RS12830 4eb351af8aa8ac1ea4c80f5cfca09ad7 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.315 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VV93_RS12830 4eb351af8aa8ac1ea4c80f5cfca09ad7 126 SUPERFAMILY SSF56214 3 125 1.83E-31 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VV93_RS12830 4eb351af8aa8ac1ea4c80f5cfca09ad7 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 125 1.1E-33 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VV93_RS12830 4eb351af8aa8ac1ea4c80f5cfca09ad7 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 88 2.0E-40 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VV93_RS12830 4eb351af8aa8ac1ea4c80f5cfca09ad7 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 6.6E-23 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VV93_RS12830 4eb351af8aa8ac1ea4c80f5cfca09ad7 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 2.0E-42 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VV93_RS12830 4eb351af8aa8ac1ea4c80f5cfca09ad7 126 Gene3D G3DSA:3.90.470.20 1 125 1.4E-42 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VV93_RS03225 4674845d49e48a1dd03578db22e1a145 356 PANTHER PTHR21225 1 348 2.7E-220 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VV93_RS03225 4674845d49e48a1dd03578db22e1a145 356 Gene3D G3DSA:3.20.20.70 11 348 1.5E-153 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS03225 4674845d49e48a1dd03578db22e1a145 356 PIRSF PIRSF001361 1 354 2.4E-162 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VV93_RS03225 4674845d49e48a1dd03578db22e1a145 356 Pfam PF00793 DAHP synthetase I family 42 340 3.6E-104 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VV93_RS03225 4674845d49e48a1dd03578db22e1a145 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 347 7.7E-162 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VV93_RS03225 4674845d49e48a1dd03578db22e1a145 356 SUPERFAMILY SSF51569 8 345 2.11E-138 T 23-04-2016 VV93_RS00945 ca6d989e18a60a6ab4aff7debe78572c 216 PANTHER PTHR11649 11 198 3.7E-53 T 23-04-2016 VV93_RS00945 ca6d989e18a60a6ab4aff7debe78572c 216 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 27.252 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 VV93_RS00945 ca6d989e18a60a6ab4aff7debe78572c 216 SUPERFAMILY SSF52540 16 201 1.2E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00945 ca6d989e18a60a6ab4aff7debe78572c 216 Gene3D G3DSA:3.40.50.300 7 197 5.1E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00945 ca6d989e18a60a6ab4aff7debe78572c 216 Pfam PF01926 50S ribosome-binding GTPase 29 147 1.5E-20 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS00945 ca6d989e18a60a6ab4aff7debe78572c 216 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 6.4E-73 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 VV93_RS07695 602fd9afcba9e1ebc2895e4bfed9b2db 699 Gene3D G3DSA:3.10.560.10 486 575 1.7E-15 T 23-04-2016 VV93_RS07695 602fd9afcba9e1ebc2895e4bfed9b2db 699 Gene3D G3DSA:3.10.560.10 293 377 1.1E-15 T 23-04-2016 VV93_RS07695 602fd9afcba9e1ebc2895e4bfed9b2db 699 Gene3D G3DSA:3.10.560.10 584 670 3.0E-15 T 23-04-2016 VV93_RS07695 602fd9afcba9e1ebc2895e4bfed9b2db 699 Gene3D G3DSA:3.10.560.10 208 287 4.8E-13 T 23-04-2016 VV93_RS07695 602fd9afcba9e1ebc2895e4bfed9b2db 699 Gene3D G3DSA:3.10.560.10 392 470 2.1E-11 T 23-04-2016 VV93_RS07695 602fd9afcba9e1ebc2895e4bfed9b2db 699 Gene3D G3DSA:3.10.560.10 95 180 2.9E-13 T 23-04-2016 VV93_RS07695 602fd9afcba9e1ebc2895e4bfed9b2db 699 Gene3D G3DSA:3.30.1950.10 31 90 2.3E-10 T 23-04-2016 VV93_RS07695 602fd9afcba9e1ebc2895e4bfed9b2db 699 Pfam PF02563 Polysaccharide biosynthesis/export protein 25 96 7.6E-12 T 23-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VV93_RS07695 602fd9afcba9e1ebc2895e4bfed9b2db 699 Pfam PF10531 SLBB domain 494 537 7.0E-6 T 23-04-2016 IPR019554 Soluble ligand binding domain VV93_RS07695 602fd9afcba9e1ebc2895e4bfed9b2db 699 Pfam PF10531 SLBB domain 104 148 1.2E-4 T 23-04-2016 IPR019554 Soluble ligand binding domain VV93_RS07695 602fd9afcba9e1ebc2895e4bfed9b2db 699 Pfam PF10531 SLBB domain 589 632 1.2E-9 T 23-04-2016 IPR019554 Soluble ligand binding domain VV93_RS07695 602fd9afcba9e1ebc2895e4bfed9b2db 699 Pfam PF10531 SLBB domain 299 351 6.8E-13 T 23-04-2016 IPR019554 Soluble ligand binding domain VV93_RS07695 602fd9afcba9e1ebc2895e4bfed9b2db 699 Pfam PF10531 SLBB domain 395 445 4.8E-8 T 23-04-2016 IPR019554 Soluble ligand binding domain VV93_RS07695 602fd9afcba9e1ebc2895e4bfed9b2db 699 Pfam PF10531 SLBB domain 211 252 4.9E-5 T 23-04-2016 IPR019554 Soluble ligand binding domain VV93_RS07695 602fd9afcba9e1ebc2895e4bfed9b2db 699 PANTHER PTHR33619 492 677 5.7E-28 T 23-04-2016 VV93_RS07695 602fd9afcba9e1ebc2895e4bfed9b2db 699 PANTHER PTHR33619 200 452 5.7E-28 T 23-04-2016 VV93_RS07695 602fd9afcba9e1ebc2895e4bfed9b2db 699 PANTHER PTHR33619 10 91 5.7E-28 T 23-04-2016 VV93_RS01515 0333c45bfd542b3f38e74aa70876bec4 611 PIRSF PIRSF004950 1 611 4.7E-227 T 23-04-2016 IPR012159 Inner membrane protein YejM VV93_RS01515 0333c45bfd542b3f38e74aa70876bec4 611 Pfam PF11893 Domain of unknown function (DUF3413) 3 239 1.8E-55 T 23-04-2016 IPR024588 Inner membrane protein YejM, N-terminal VV93_RS01515 0333c45bfd542b3f38e74aa70876bec4 611 Gene3D G3DSA:3.40.720.10 248 545 4.2E-40 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VV93_RS01515 0333c45bfd542b3f38e74aa70876bec4 611 PANTHER PTHR10342 219 571 1.5E-75 T 23-04-2016 VV93_RS01515 0333c45bfd542b3f38e74aa70876bec4 611 SUPERFAMILY SSF53649 245 594 8.21E-59 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VV93_RS01515 0333c45bfd542b3f38e74aa70876bec4 611 PANTHER PTHR10342:SF235 219 571 1.5E-75 T 23-04-2016 VV93_RS01515 0333c45bfd542b3f38e74aa70876bec4 611 Pfam PF00884 Sulfatase 248 527 2.3E-33 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VV93_RS10620 417a7acf0c881af764baa85ec218fcc3 308 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 49 248 2.7E-58 T 23-04-2016 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN VV93_RS10620 417a7acf0c881af764baa85ec218fcc3 308 SUPERFAMILY SSF159501 28 277 9.42E-72 T 23-04-2016 VV93_RS10620 417a7acf0c881af764baa85ec218fcc3 308 PIRSF PIRSF020419 1 292 1.2E-75 T 23-04-2016 IPR016773 Ferric uptake regulator, CjrA, predicted VV93_RS12330 b81ae138edca531aaae048e2aa493e36 361 Pfam PF01594 Domain of unknown function DUF20 14 347 1.0E-52 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like VV93_RS12330 b81ae138edca531aaae048e2aa493e36 361 PANTHER PTHR21716 3 361 7.0E-106 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like VV93_RS12330 b81ae138edca531aaae048e2aa493e36 361 PANTHER PTHR21716:SF13 3 361 7.0E-106 T 23-04-2016 VV93_RS10350 24ef267f83873dd3c490ac623638ccbb 225 PANTHER PTHR30450 1 225 7.3E-146 T 23-04-2016 VV93_RS10350 24ef267f83873dd3c490ac623638ccbb 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 1.4E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS10350 24ef267f83873dd3c490ac623638ccbb 225 PANTHER PTHR30450:SF4 1 225 7.3E-146 T 23-04-2016 VV93_RS10350 24ef267f83873dd3c490ac623638ccbb 225 SUPERFAMILY SSF161098 11 203 9.29E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS10350 24ef267f83873dd3c490ac623638ccbb 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 9.7E-24 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VV93_RS10350 24ef267f83873dd3c490ac623638ccbb 225 Gene3D G3DSA:1.10.3720.10 11 217 3.3E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS04160 ce8afbb85ce7e232d541c8149c009a49 281 Gene3D G3DSA:3.30.1130.10 21 134 5.6E-46 T 23-04-2016 VV93_RS04160 ce8afbb85ce7e232d541c8149c009a49 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 3.2E-129 T 23-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VV93_RS04160 ce8afbb85ce7e232d541c8149c009a49 281 Gene3D G3DSA:3.30.1130.10 144 280 3.3E-56 T 23-04-2016 VV93_RS04160 ce8afbb85ce7e232d541c8149c009a49 281 PANTHER PTHR34354:SF1 2 281 4.3E-103 T 23-04-2016 VV93_RS04160 ce8afbb85ce7e232d541c8149c009a49 281 Pfam PF14489 QueF-like protein 194 270 1.5E-27 T 23-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VV93_RS04160 ce8afbb85ce7e232d541c8149c009a49 281 PANTHER PTHR34354 2 281 4.3E-103 T 23-04-2016 VV93_RS04160 ce8afbb85ce7e232d541c8149c009a49 281 SUPERFAMILY SSF55620 184 267 2.37E-10 T 23-04-2016 VV93_RS04160 ce8afbb85ce7e232d541c8149c009a49 281 PIRSF PIRSF004750 6 281 4.2E-131 T 23-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VV93_RS04160 ce8afbb85ce7e232d541c8149c009a49 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 1.9E-49 T 23-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VV93_RS04160 ce8afbb85ce7e232d541c8149c009a49 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 165.609 T 23-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VV93_RS15095 bf56c8822b61e7e6b5a89e76dce978c7 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 10 211 6.1E-67 T 23-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 VV93_RS15095 bf56c8822b61e7e6b5a89e76dce978c7 214 Pfam PF03006 Haemolysin-III related 7 204 5.1E-38 T 23-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 VV93_RS15095 bf56c8822b61e7e6b5a89e76dce978c7 214 PANTHER PTHR20855:SF3 4 213 3.4E-71 T 23-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 VV93_RS15095 bf56c8822b61e7e6b5a89e76dce978c7 214 PANTHER PTHR20855 4 213 3.4E-71 T 23-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 VV93_RS02460 7c1e0c340e92bb013316eb57372fe50b 1122 Gene3D G3DSA:3.40.50.300 396 508 8.9E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02460 7c1e0c340e92bb013316eb57372fe50b 1122 Gene3D G3DSA:3.40.50.300 557 630 8.9E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02460 7c1e0c340e92bb013316eb57372fe50b 1122 Pfam PF04851 Type III restriction enzyme, res subunit 401 493 5.5E-6 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VV93_RS02460 7c1e0c340e92bb013316eb57372fe50b 1122 TIGRFAM TIGR02562 cas3_yersinia: CRISPR-associated helicase Cas3, subtype I-F/YPEST 1 984 4.7E-280 T 23-04-2016 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type VV93_RS02460 7c1e0c340e92bb013316eb57372fe50b 1122 SUPERFAMILY SSF52540 709 798 6.3E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02460 7c1e0c340e92bb013316eb57372fe50b 1122 SUPERFAMILY SSF52540 833 878 6.3E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02460 7c1e0c340e92bb013316eb57372fe50b 1122 SUPERFAMILY SSF52540 425 474 6.3E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02460 7c1e0c340e92bb013316eb57372fe50b 1122 SUPERFAMILY SSF52540 556 630 6.3E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02145 7808efc63f3ffda0ebbac245441eb2c8 487 Pfam PF04963 Sigma-54 factor, core binding domain 126 315 7.4E-59 T 23-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 VV93_RS02145 7808efc63f3ffda0ebbac245441eb2c8 487 PANTHER PTHR32248 1 487 5.5E-177 T 23-04-2016 VV93_RS02145 7808efc63f3ffda0ebbac245441eb2c8 487 PANTHER PTHR32248:SF4 1 487 5.5E-177 T 23-04-2016 VV93_RS02145 7808efc63f3ffda0ebbac245441eb2c8 487 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 2.0E-17 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VV93_RS02145 7808efc63f3ffda0ebbac245441eb2c8 487 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 484 4.4E-156 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VV93_RS02145 7808efc63f3ffda0ebbac245441eb2c8 487 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 465 472 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VV93_RS02145 7808efc63f3ffda0ebbac245441eb2c8 487 PIRSF PIRSF000774 1 487 6.0E-151 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VV93_RS02145 7808efc63f3ffda0ebbac245441eb2c8 487 PRINTS PR00045 Sigma-54 factor signature 402 413 3.3E-31 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VV93_RS02145 7808efc63f3ffda0ebbac245441eb2c8 487 PRINTS PR00045 Sigma-54 factor signature 198 215 3.3E-31 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VV93_RS02145 7808efc63f3ffda0ebbac245441eb2c8 487 PRINTS PR00045 Sigma-54 factor signature 386 398 3.3E-31 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VV93_RS02145 7808efc63f3ffda0ebbac245441eb2c8 487 PRINTS PR00045 Sigma-54 factor signature 460 478 3.3E-31 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VV93_RS02145 7808efc63f3ffda0ebbac245441eb2c8 487 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 374 393 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VV93_RS02145 7808efc63f3ffda0ebbac245441eb2c8 487 Pfam PF04552 Sigma-54, DNA binding domain 327 485 3.1E-72 T 23-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding VV93_RS00165 2ea326289e589cf3d9357a5f7426da95 158 Gene3D G3DSA:1.10.10.60 20 91 1.2E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS00165 2ea326289e589cf3d9357a5f7426da95 158 Pfam PF13592 Winged helix-turn helix 99 156 1.1E-13 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS00165 2ea326289e589cf3d9357a5f7426da95 158 Pfam PF13551 Winged helix-turn helix 24 83 3.5E-13 T 23-04-2016 VV93_RS00165 2ea326289e589cf3d9357a5f7426da95 158 SUPERFAMILY SSF46689 16 132 4.84E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS00935 f6f2d999c5b52835405ee4a486ccd14a 347 PANTHER PTHR11458 9 343 7.4E-189 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00935 f6f2d999c5b52835405ee4a486ccd14a 347 SMART SM01004 9 333 1.9E-245 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00935 f6f2d999c5b52835405ee4a486ccd14a 347 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 23-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00935 f6f2d999c5b52835405ee4a486ccd14a 347 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 1.0E-142 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00935 f6f2d999c5b52835405ee4a486ccd14a 347 PIRSF PIRSF001415 2 336 1.0E-152 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00935 f6f2d999c5b52835405ee4a486ccd14a 347 Gene3D G3DSA:3.20.20.70 8 336 9.3E-155 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS00935 f6f2d999c5b52835405ee4a486ccd14a 347 SUPERFAMILY SSF51569 7 335 3.66E-145 T 23-04-2016 VV93_RS00935 f6f2d999c5b52835405ee4a486ccd14a 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 1.2E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00935 f6f2d999c5b52835405ee4a486ccd14a 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 1.2E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00935 f6f2d999c5b52835405ee4a486ccd14a 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.2E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00935 f6f2d999c5b52835405ee4a486ccd14a 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 1.2E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00935 f6f2d999c5b52835405ee4a486ccd14a 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 1.2E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00935 f6f2d999c5b52835405ee4a486ccd14a 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 1.2E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS11700 da0c7f5960ca140ad6b40d89755f746f 199 SUPERFAMILY SSF52317 3 192 3.11E-44 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS11700 da0c7f5960ca140ad6b40d89755f746f 199 Pfam PF01965 DJ-1/PfpI family 3 169 1.8E-37 T 23-04-2016 IPR002818 DJ-1/PfpI VV93_RS11700 da0c7f5960ca140ad6b40d89755f746f 199 PANTHER PTHR11019:SF4 1 194 1.6E-55 T 23-04-2016 VV93_RS11700 da0c7f5960ca140ad6b40d89755f746f 199 Gene3D G3DSA:3.40.50.880 1 188 4.0E-51 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS11700 da0c7f5960ca140ad6b40d89755f746f 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 184 3.3E-62 T 23-04-2016 IPR006287 DJ-1 VV93_RS11700 da0c7f5960ca140ad6b40d89755f746f 199 PANTHER PTHR11019 1 194 1.6E-55 T 23-04-2016 VV93_RS13225 bc0c4a4c1f184a1f9d39f84654ce3bee 331 SMART SM00354 1 71 2.5E-29 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS13225 bc0c4a4c1f184a1f9d39f84654ce3bee 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 8.1E-18 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS13225 bc0c4a4c1f184a1f9d39f84654ce3bee 331 SUPERFAMILY SSF53822 61 315 2.57E-67 T 23-04-2016 IPR028082 Periplasmic binding protein-like I VV93_RS13225 bc0c4a4c1f184a1f9d39f84654ce3bee 331 Gene3D G3DSA:3.40.50.2300 167 313 9.0E-48 T 23-04-2016 VV93_RS13225 bc0c4a4c1f184a1f9d39f84654ce3bee 331 Gene3D G3DSA:1.10.260.40 3 57 5.9E-24 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS13225 bc0c4a4c1f184a1f9d39f84654ce3bee 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.4E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS13225 bc0c4a4c1f184a1f9d39f84654ce3bee 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.4E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VV93_RS13225 bc0c4a4c1f184a1f9d39f84654ce3bee 331 SUPERFAMILY SSF47413 2 59 2.28E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS13225 bc0c4a4c1f184a1f9d39f84654ce3bee 331 PANTHER PTHR30146 1 327 7.6E-205 T 23-04-2016 VV93_RS13225 bc0c4a4c1f184a1f9d39f84654ce3bee 331 Pfam PF13377 Periplasmic binding protein-like domain 168 314 6.4E-30 T 23-04-2016 VV93_RS13225 bc0c4a4c1f184a1f9d39f84654ce3bee 331 Gene3D G3DSA:3.40.50.2300 58 166 8.3E-45 T 23-04-2016 VV93_RS13225 bc0c4a4c1f184a1f9d39f84654ce3bee 331 PANTHER PTHR30146:SF46 1 327 7.6E-205 T 23-04-2016 VV93_RS09870 f8f1c64fff8cd83449079b9477e28d74 484 PANTHER PTHR30354:SF0 1 450 4.5E-152 T 23-04-2016 VV93_RS09870 f8f1c64fff8cd83449079b9477e28d74 484 PANTHER PTHR30354 1 450 4.5E-152 T 23-04-2016 VV93_RS09870 f8f1c64fff8cd83449079b9477e28d74 484 Pfam PF02447 GntP family permease 5 446 3.2E-101 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VV93_RS07950 08664f3cb0518be0449ca4ac8e6a09c4 399 SMART SM00897 28 227 5.1E-35 T 23-04-2016 IPR013702 FIST domain, N-terminal VV93_RS07950 08664f3cb0518be0449ca4ac8e6a09c4 399 PANTHER PTHR40252 14 399 1.8E-104 T 23-04-2016 VV93_RS07950 08664f3cb0518be0449ca4ac8e6a09c4 399 Pfam PF08495 FIST N domain 32 226 6.2E-23 T 23-04-2016 IPR013702 FIST domain, N-terminal VV93_RS07950 08664f3cb0518be0449ca4ac8e6a09c4 399 Pfam PF10442 FIST C domain 229 374 1.1E-14 T 23-04-2016 IPR019494 FIST, C-domain VV93_RS07950 08664f3cb0518be0449ca4ac8e6a09c4 399 PANTHER PTHR40252:SF2 14 399 1.8E-104 T 23-04-2016 VV93_RS07950 08664f3cb0518be0449ca4ac8e6a09c4 399 SMART SM01204 228 375 4.7E-28 T 23-04-2016 IPR019494 FIST, C-domain VV93_RS05845 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 6.7E-6 T 23-04-2016 VV93_RS05845 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 6.7E-6 T 23-04-2016 VV93_RS05845 ab8fa255f310afa6bce0fd85ada1ba32 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 3.6E-55 T 23-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VV93_RS05845 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00097 Anthranilate synthase component II signature 166 179 7.2E-35 T 23-04-2016 VV93_RS05845 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00097 Anthranilate synthase component II signature 52 61 7.2E-35 T 23-04-2016 VV93_RS05845 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00097 Anthranilate synthase component II signature 124 136 7.2E-35 T 23-04-2016 VV93_RS05845 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00097 Anthranilate synthase component II signature 79 90 7.2E-35 T 23-04-2016 VV93_RS05845 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00097 Anthranilate synthase component II signature 4 18 7.2E-35 T 23-04-2016 VV93_RS05845 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00097 Anthranilate synthase component II signature 104 112 7.2E-35 T 23-04-2016 VV93_RS05845 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 8.2E-14 T 23-04-2016 VV93_RS05845 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 8.2E-14 T 23-04-2016 VV93_RS05845 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 8.2E-14 T 23-04-2016 VV93_RS05845 ab8fa255f310afa6bce0fd85ada1ba32 192 Gene3D G3DSA:3.40.50.880 3 189 2.3E-55 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS05845 ab8fa255f310afa6bce0fd85ada1ba32 192 PANTHER PTHR11922:SF25 1 189 6.4E-83 T 23-04-2016 VV93_RS05845 ab8fa255f310afa6bce0fd85ada1ba32 192 PANTHER PTHR11922 1 189 6.4E-83 T 23-04-2016 VV93_RS05845 ab8fa255f310afa6bce0fd85ada1ba32 192 SUPERFAMILY SSF52317 3 191 8.84E-48 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like VV93_RS05845 ab8fa255f310afa6bce0fd85ada1ba32 192 Pfam PF00117 Glutamine amidotransferase class-I 6 186 2.2E-44 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VV93_RS00800 991b56adc30e9820e8b7462e149ebb02 183 Pfam PF13505 Outer membrane protein beta-barrel domain 8 183 6.5E-9 T 23-04-2016 IPR027385 Outer membrane protein beta-barrel VV93_RS00800 991b56adc30e9820e8b7462e149ebb02 183 SUPERFAMILY SSF56925 21 183 4.71E-15 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VV93_RS00800 991b56adc30e9820e8b7462e149ebb02 183 Gene3D G3DSA:2.40.160.20 10 183 9.4E-13 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VV93_RS12060 9218b47c5931a8971722f05ceae5357d 511 SUPERFAMILY SSF55073 371 508 1.57E-31 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS12060 9218b47c5931a8971722f05ceae5357d 511 Pfam PF07695 7TM diverse intracellular signalling 151 343 1.9E-17 T 23-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 VV93_RS12060 9218b47c5931a8971722f05ceae5357d 511 SMART SM00267 356 511 1.2E-29 T 23-04-2016 IPR000160 GGDEF domain VV93_RS12060 9218b47c5931a8971722f05ceae5357d 511 Gene3D G3DSA:3.30.70.270 368 508 1.4E-31 T 23-04-2016 VV93_RS12060 9218b47c5931a8971722f05ceae5357d 511 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 365 508 7.5E-24 T 23-04-2016 IPR000160 GGDEF domain VV93_RS12060 9218b47c5931a8971722f05ceae5357d 511 PANTHER PTHR10799 392 505 3.4E-15 T 23-04-2016 VV93_RS12060 9218b47c5931a8971722f05ceae5357d 511 PANTHER PTHR10799 215 356 3.4E-15 T 23-04-2016 VV93_RS12060 9218b47c5931a8971722f05ceae5357d 511 PANTHER PTHR10799:SF710 392 505 3.4E-15 T 23-04-2016 VV93_RS12060 9218b47c5931a8971722f05ceae5357d 511 PANTHER PTHR10799:SF710 215 356 3.4E-15 T 23-04-2016 VV93_RS12060 9218b47c5931a8971722f05ceae5357d 511 Pfam PF00990 Diguanylate cyclase, GGDEF domain 366 507 1.8E-27 T 23-04-2016 IPR000160 GGDEF domain VV93_RS16680 0b37bae0a1b4cfcd60b7e0bab68a16ed 344 SUPERFAMILY SSF53649 32 324 1.2E-25 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VV93_RS16680 0b37bae0a1b4cfcd60b7e0bab68a16ed 344 Gene3D G3DSA:3.40.720.10 33 340 4.6E-20 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VV93_RS16680 0b37bae0a1b4cfcd60b7e0bab68a16ed 344 PANTHER PTHR10342 5 324 3.1E-18 T 23-04-2016 VV93_RS16680 0b37bae0a1b4cfcd60b7e0bab68a16ed 344 PANTHER PTHR10342:SF236 5 324 3.1E-18 T 23-04-2016 VV93_RS16680 0b37bae0a1b4cfcd60b7e0bab68a16ed 344 Pfam PF00884 Sulfatase 34 324 7.3E-23 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 SUPERFAMILY SSF52540 205 469 3.6E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 Pfam PF01926 50S ribosome-binding GTPase 5 119 7.5E-28 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 Pfam PF01926 50S ribosome-binding GTPase 210 327 9.2E-25 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.8E-11 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 6.8E-11 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 Hamap MF_00195 GTPase Der [der]. 2 466 39.122 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 PANTHER PTHR11649:SF5 1 465 1.0E-163 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 Gene3D G3DSA:3.40.50.300 203 388 4.3E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 Gene3D G3DSA:3.40.50.300 2 164 1.9E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 SMART SM00173 209 380 0.0091 T 23-04-2016 VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 1.4E-20 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 206 372 1.5E-25 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 SUPERFAMILY SSF52540 4 164 1.28E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 Gene3D G3DSA:3.30.300.20 389 464 5.8E-24 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 SMART SM00382 1 173 2.3 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 SMART SM00382 206 353 0.12 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 PIRSF PIRSF006485 1 471 9.7E-180 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 383 462 9.5E-27 T 23-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 463 9.1E-180 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VV93_RS03630 d2efb73172c7fa079eb3e313e91ef54e 496 PANTHER PTHR11649 1 465 1.0E-163 T 23-04-2016 VV93_RS09710 3e8233b59413dc73955cc00a233b8c48 382 PANTHER PTHR11496 1 382 1.2E-182 T 23-04-2016 VV93_RS09710 3e8233b59413dc73955cc00a233b8c48 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 374 2.3E-120 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 VV93_RS09710 3e8233b59413dc73955cc00a233b8c48 382 PANTHER PTHR11496:SF74 1 382 1.2E-182 T 23-04-2016 VV93_RS09710 3e8233b59413dc73955cc00a233b8c48 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 23-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VV93_RS09710 3e8233b59413dc73955cc00a233b8c48 382 Gene3D G3DSA:3.40.50.1970 2 183 8.5E-56 T 23-04-2016 VV93_RS09710 3e8233b59413dc73955cc00a233b8c48 382 Gene3D G3DSA:1.20.1090.10 184 382 5.5E-73 T 23-04-2016 VV93_RS09710 3e8233b59413dc73955cc00a233b8c48 382 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 3 378 1.7E-184 T 23-04-2016 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77|UniPathway: UPA00563 VV93_RS09710 3e8233b59413dc73955cc00a233b8c48 382 SUPERFAMILY SSF56796 4 380 6.67E-126 T 23-04-2016 VV93_RS09710 3e8233b59413dc73955cc00a233b8c48 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 23-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VV93_RS07975 bd354a3df68d4f1679889e83aee1141d 325 SUPERFAMILY SSF46626 145 238 1.86E-30 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS07975 bd354a3df68d4f1679889e83aee1141d 325 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 113 322 6.3E-59 T 23-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 VV93_RS07975 bd354a3df68d4f1679889e83aee1141d 325 Gene3D G3DSA:1.10.760.10 245 322 7.4E-26 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS07975 bd354a3df68d4f1679889e83aee1141d 325 PRINTS PR00605 Class IC cytochrome C signature 164 175 1.6E-5 T 23-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VV93_RS07975 bd354a3df68d4f1679889e83aee1141d 325 PRINTS PR00605 Class IC cytochrome C signature 206 228 1.6E-5 T 23-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VV93_RS07975 bd354a3df68d4f1679889e83aee1141d 325 SUPERFAMILY SSF46626 55 78 1.86E-30 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS07975 bd354a3df68d4f1679889e83aee1141d 325 PANTHER PTHR33751:SF1 115 325 9.9E-113 T 23-04-2016 VV93_RS07975 bd354a3df68d4f1679889e83aee1141d 325 PANTHER PTHR33751:SF1 25 79 9.9E-113 T 23-04-2016 VV93_RS07975 bd354a3df68d4f1679889e83aee1141d 325 PIRSF PIRSF000006 1 322 1.2E-109 T 23-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 VV93_RS07975 bd354a3df68d4f1679889e83aee1141d 325 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 154 228 5.3E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS07975 bd354a3df68d4f1679889e83aee1141d 325 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 241 315 3.8E-10 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS07975 bd354a3df68d4f1679889e83aee1141d 325 PANTHER PTHR33751 115 325 9.9E-113 T 23-04-2016 VV93_RS07975 bd354a3df68d4f1679889e83aee1141d 325 PANTHER PTHR33751 25 79 9.9E-113 T 23-04-2016 VV93_RS07975 bd354a3df68d4f1679889e83aee1141d 325 SUPERFAMILY SSF46626 238 323 3.58E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS07975 bd354a3df68d4f1679889e83aee1141d 325 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 38 83 2.3E-23 T 23-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 VV93_RS07975 bd354a3df68d4f1679889e83aee1141d 325 Gene3D G3DSA:1.10.760.10 60 82 7.7E-33 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS07975 bd354a3df68d4f1679889e83aee1141d 325 Gene3D G3DSA:1.10.760.10 149 244 7.7E-33 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS01305 1167f7927879b3633103f08915a00170 82 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 24 70 1.3E-11 T 23-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 VV93_RS01305 1167f7927879b3633103f08915a00170 82 Pfam PF12728 Helix-turn-helix domain 24 73 4.5E-11 T 23-04-2016 VV93_RS11815 19284097879ceadd5064130f5e6217f8 309 Gene3D G3DSA:1.20.58.340 240 308 5.1E-15 T 23-04-2016 VV93_RS11815 19284097879ceadd5064130f5e6217f8 309 SUPERFAMILY SSF144083 246 306 2.75E-12 T 23-04-2016 VV93_RS11815 19284097879ceadd5064130f5e6217f8 309 SUPERFAMILY SSF143865 26 235 1.44E-29 T 23-04-2016 VV93_RS11815 19284097879ceadd5064130f5e6217f8 309 Gene3D G3DSA:1.20.58.340 137 224 1.6E-4 T 23-04-2016 VV93_RS11815 19284097879ceadd5064130f5e6217f8 309 Pfam PF01544 CorA-like Mg2+ transporter protein 28 304 3.2E-43 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 VV93_RS11815 19284097879ceadd5064130f5e6217f8 309 PANTHER PTHR21535 50 309 3.3E-15 T 23-04-2016 VV93_RS08965 7d2eda0f4e91801d0762c9d80d1dd111 465 SUPERFAMILY SSF53300 118 181 1.6E-17 T 23-04-2016 IPR002035 von Willebrand factor, type A VV93_RS08965 7d2eda0f4e91801d0762c9d80d1dd111 465 SUPERFAMILY SSF53300 316 458 1.6E-17 T 23-04-2016 IPR002035 von Willebrand factor, type A VV93_RS08965 7d2eda0f4e91801d0762c9d80d1dd111 465 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 6 48 8.3E-7 T 23-04-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal VV93_RS08965 7d2eda0f4e91801d0762c9d80d1dd111 465 Pfam PF00092 von Willebrand factor type A domain 129 193 1.4E-5 T 23-04-2016 IPR002035 von Willebrand factor, type A VV93_RS08965 7d2eda0f4e91801d0762c9d80d1dd111 465 Gene3D G3DSA:3.40.50.410 125 181 7.8E-13 T 23-04-2016 IPR002035 von Willebrand factor, type A VV93_RS08965 7d2eda0f4e91801d0762c9d80d1dd111 465 Gene3D G3DSA:3.40.50.410 316 458 7.8E-13 T 23-04-2016 IPR002035 von Willebrand factor, type A VV93_RS05985 c705cf4a3ef05851dbf34f16600b3f8e 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 23-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VV93_RS05985 c705cf4a3ef05851dbf34f16600b3f8e 377 PANTHER PTHR23409:SF23 197 377 2.4E-271 T 23-04-2016 VV93_RS05985 c705cf4a3ef05851dbf34f16600b3f8e 377 PANTHER PTHR23409:SF23 1 173 2.4E-271 T 23-04-2016 VV93_RS05985 c705cf4a3ef05851dbf34f16600b3f8e 377 PANTHER PTHR23409 197 377 2.4E-271 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 VV93_RS05985 c705cf4a3ef05851dbf34f16600b3f8e 377 PANTHER PTHR23409 1 173 2.4E-271 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 VV93_RS05985 c705cf4a3ef05851dbf34f16600b3f8e 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 6.4E-49 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 VV93_RS05985 c705cf4a3ef05851dbf34f16600b3f8e 377 Gene3D G3DSA:1.10.620.20 3 341 1.1E-123 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 VV93_RS05985 c705cf4a3ef05851dbf34f16600b3f8e 377 SUPERFAMILY SSF47240 3 341 2.08E-112 T 23-04-2016 IPR009078 Ferritin-like superfamily VV93_RS08735 7978ab77f103a2ebf0abfe1b1ad7aefd 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 108 153 5.0E-20 T 23-04-2016 VV93_RS08735 7978ab77f103a2ebf0abfe1b1ad7aefd 153 Pfam PF04191 Phospholipid methyltransferase 38 142 1.7E-13 T 23-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 VV93_RS08735 7978ab77f103a2ebf0abfe1b1ad7aefd 153 PANTHER PTHR12714 10 153 1.3E-18 T 23-04-2016 VV93_RS08735 7978ab77f103a2ebf0abfe1b1ad7aefd 153 PANTHER PTHR12714:SF7 10 153 1.3E-18 T 23-04-2016 VV93_RS08780 7d863fa4affa7eb0bb8bf7ca4b97ebea 217 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 35.767 T 23-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 VV93_RS08780 7d863fa4affa7eb0bb8bf7ca4b97ebea 217 Gene3D G3DSA:3.40.50.150 17 214 2.7E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS08780 7d863fa4affa7eb0bb8bf7ca4b97ebea 217 PANTHER PTHR10259:SF16 1 214 6.8E-100 T 23-04-2016 VV93_RS08780 7d863fa4affa7eb0bb8bf7ca4b97ebea 217 SUPERFAMILY SSF53335 3 214 5.74E-53 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS08780 7d863fa4affa7eb0bb8bf7ca4b97ebea 217 PIRSF PIRSF023956 2 217 6.6E-72 T 23-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 VV93_RS08780 7d863fa4affa7eb0bb8bf7ca4b97ebea 217 PANTHER PTHR10259 1 214 6.8E-100 T 23-04-2016 VV93_RS08780 7d863fa4affa7eb0bb8bf7ca4b97ebea 217 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 215 1.0E-73 T 23-04-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67 VV93_RS08780 7d863fa4affa7eb0bb8bf7ca4b97ebea 217 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 213 2.0E-77 T 23-04-2016 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 VV93_RS00455 033840be4dbca97071777052f620beb1 238 Pfam PF00702 haloacid dehalogenase-like hydrolase 11 194 4.9E-11 T 23-04-2016 VV93_RS00455 033840be4dbca97071777052f620beb1 238 PANTHER PTHR12725 1 238 2.0E-56 T 23-04-2016 VV93_RS00455 033840be4dbca97071777052f620beb1 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 127 198 1.5E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VV93_RS00455 033840be4dbca97071777052f620beb1 238 PANTHER PTHR12725:SF65 1 238 2.0E-56 T 23-04-2016 VV93_RS00455 033840be4dbca97071777052f620beb1 238 SUPERFAMILY SSF56784 10 236 3.58E-34 T 23-04-2016 IPR023214 HAD-like domain VV93_RS00455 033840be4dbca97071777052f620beb1 238 Gene3D G3DSA:3.40.50.1000 10 235 2.5E-26 T 23-04-2016 IPR023214 HAD-like domain VV93_RS03960 28169ae35e328476939535b92fec1e23 281 SUPERFAMILY SSF53474 3 279 4.39E-91 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS03960 28169ae35e328476939535b92fec1e23 281 PANTHER PTHR10061 3 281 7.8E-158 T 23-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 VV93_RS03960 28169ae35e328476939535b92fec1e23 281 PANTHER PTHR10061:SF0 3 281 7.8E-158 T 23-04-2016 VV93_RS03960 28169ae35e328476939535b92fec1e23 281 Gene3D G3DSA:3.40.50.1820 3 279 2.8E-78 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS03960 28169ae35e328476939535b92fec1e23 281 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 278 1.0E-118 T 23-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 VV93_RS03960 28169ae35e328476939535b92fec1e23 281 Pfam PF00756 Putative esterase 23 273 8.4E-61 T 23-04-2016 IPR000801 Putative esterase VV93_RS15020 6aaaa8a2495e38bd195611c9dc1a6108 87 Pfam PF07369 Protein of unknown function (DUF1488) 5 86 3.9E-26 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 VV93_RS15020 6aaaa8a2495e38bd195611c9dc1a6108 87 Gene3D G3DSA:3.30.160.140 1 86 1.6E-34 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 VV93_RS15020 6aaaa8a2495e38bd195611c9dc1a6108 87 SUPERFAMILY SSF160272 1 86 1.31E-28 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 VV93_RS03580 923d80f3de09dae1110833f7466c22bc 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 23-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 VV93_RS03580 923d80f3de09dae1110833f7466c22bc 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 3.0E-61 T 23-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 VV93_RS03580 923d80f3de09dae1110833f7466c22bc 112 PANTHER PTHR23426 7 112 2.4E-41 T 23-04-2016 VV93_RS03580 923d80f3de09dae1110833f7466c22bc 112 Gene3D G3DSA:3.10.20.30 1 101 1.6E-34 T 23-04-2016 IPR012675 Beta-grasp domain VV93_RS03580 923d80f3de09dae1110833f7466c22bc 112 SUPERFAMILY SSF54292 5 107 1.57E-32 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VV93_RS03580 923d80f3de09dae1110833f7466c22bc 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 1.1E-14 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VV93_RS03580 923d80f3de09dae1110833f7466c22bc 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.16E-10 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 VV93_RS03580 923d80f3de09dae1110833f7466c22bc 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.16E-10 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 VV93_RS03580 923d80f3de09dae1110833f7466c22bc 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.16E-10 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 VV93_RS03245 393887e583d923cf797a002ebe00b22e 555 Pfam PF00005 ABC transporter 22 191 8.4E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS03245 393887e583d923cf797a002ebe00b22e 555 Pfam PF00005 ABC transporter 340 473 1.5E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS03245 393887e583d923cf797a002ebe00b22e 555 SUPERFAMILY SSF52540 303 525 2.48E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03245 393887e583d923cf797a002ebe00b22e 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS03245 393887e583d923cf797a002ebe00b22e 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 4.6E-292 T 23-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD VV93_RS03245 393887e583d923cf797a002ebe00b22e 555 Gene3D G3DSA:3.40.50.300 322 532 1.9E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03245 393887e583d923cf797a002ebe00b22e 555 Gene3D G3DSA:3.40.50.300 8 279 5.0E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03245 393887e583d923cf797a002ebe00b22e 555 PANTHER PTHR19211:SF7 1 555 0.0 T 23-04-2016 VV93_RS03245 393887e583d923cf797a002ebe00b22e 555 Pfam PF12848 ABC transporter 230 306 4.2E-13 T 23-04-2016 IPR032781 ABC-transporter extension domain VV93_RS03245 393887e583d923cf797a002ebe00b22e 555 PANTHER PTHR19211 1 555 0.0 T 23-04-2016 VV93_RS03245 393887e583d923cf797a002ebe00b22e 555 SUPERFAMILY SSF52540 9 243 4.46E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03245 393887e583d923cf797a002ebe00b22e 555 SMART SM00382 31 236 5.1E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS03245 393887e583d923cf797a002ebe00b22e 555 SMART SM00382 348 518 1.7E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS02630 606604add7de180cd072e293bba3d709 203 Pfam PF08239 Bacterial SH3 domain 32 82 8.1E-7 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type VV93_RS02630 606604add7de180cd072e293bba3d709 203 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 24 202 2.9E-53 T 23-04-2016 IPR016476 SH3 domain protein VV93_RS02630 606604add7de180cd072e293bba3d709 203 SMART SM00287 20 86 1.2E-7 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type VV93_RS02630 606604add7de180cd072e293bba3d709 203 PIRSF PIRSF006158 1 203 5.9E-73 T 23-04-2016 IPR016476 SH3 domain protein VV93_RS07670 eabba1baae54e2246ed4df2a722281d3 377 PANTHER PTHR12526 24 360 2.6E-41 T 23-04-2016 VV93_RS07670 eabba1baae54e2246ed4df2a722281d3 377 Pfam PF13579 Glycosyl transferase 4-like domain 34 185 1.7E-17 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VV93_RS07670 eabba1baae54e2246ed4df2a722281d3 377 Pfam PF13692 Glycosyl transferases group 1 199 325 2.1E-23 T 23-04-2016 VV93_RS07670 eabba1baae54e2246ed4df2a722281d3 377 PANTHER PTHR12526:SF374 24 360 2.6E-41 T 23-04-2016 VV93_RS07670 eabba1baae54e2246ed4df2a722281d3 377 SUPERFAMILY SSF53756 26 360 7.63E-58 T 23-04-2016 VV93_RS07670 eabba1baae54e2246ed4df2a722281d3 377 Gene3D G3DSA:3.40.50.2000 199 328 1.0E-20 T 23-04-2016 VV93_RS07100 a3898e8a38a492ea80b09cf791ec030e 599 Pfam PF01432 Peptidase family M3 339 580 1.9E-22 T 23-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 VV93_RS07100 a3898e8a38a492ea80b09cf791ec030e 599 PANTHER PTHR11804 1 593 4.3E-87 T 23-04-2016 VV93_RS07100 a3898e8a38a492ea80b09cf791ec030e 599 PANTHER PTHR11804:SF46 1 593 4.3E-87 T 23-04-2016 VV93_RS07100 a3898e8a38a492ea80b09cf791ec030e 599 Pfam PF08439 Oligopeptidase F 106 174 5.6E-10 T 23-04-2016 IPR013647 Oligopeptidase F, N-terminal domain VV93_RS07100 a3898e8a38a492ea80b09cf791ec030e 599 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 593 4.1E-219 T 23-04-2016 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 VV93_RS07100 a3898e8a38a492ea80b09cf791ec030e 599 Gene3D G3DSA:3.40.390.10 378 421 9.0E-5 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 VV93_RS07100 a3898e8a38a492ea80b09cf791ec030e 599 SUPERFAMILY SSF55486 5 580 2.93E-91 T 23-04-2016 VV93_RS05630 95d959b6108946238ba8ac996c8e4915 227 SUPERFAMILY SSF51735 1 207 4.03E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS05630 95d959b6108946238ba8ac996c8e4915 227 Pfam PF00106 short chain dehydrogenase 8 186 1.8E-16 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS05630 95d959b6108946238ba8ac996c8e4915 227 Gene3D G3DSA:3.40.50.720 2 187 1.0E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS03435 7193a0fa9f28df81e436076d753aa586 272 PANTHER PTHR24220 27 271 8.6E-138 T 23-04-2016 VV93_RS03435 7193a0fa9f28df81e436076d753aa586 272 SMART SM00382 50 247 5.6E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS03435 7193a0fa9f28df81e436076d753aa586 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 2.0E-122 T 23-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VV93_RS03435 7193a0fa9f28df81e436076d753aa586 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS03435 7193a0fa9f28df81e436076d753aa586 272 Gene3D G3DSA:3.40.50.300 19 264 1.9E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03435 7193a0fa9f28df81e436076d753aa586 272 Pfam PF00005 ABC transporter 42 197 5.9E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS03435 7193a0fa9f28df81e436076d753aa586 272 SUPERFAMILY SSF52540 22 258 4.42E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03435 7193a0fa9f28df81e436076d753aa586 272 PANTHER PTHR24220:SF585 27 271 8.6E-138 T 23-04-2016 VV93_RS08675 cd40eb71624e6d3813ba51561564c7cc 64 Pfam PF01632 Ribosomal protein L35 2 61 7.0E-20 T 23-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS08675 cd40eb71624e6d3813ba51561564c7cc 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 2.0E-25 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VV93_RS08675 cd40eb71624e6d3813ba51561564c7cc 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 23-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS08675 cd40eb71624e6d3813ba51561564c7cc 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.458 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VV93_RS08675 cd40eb71624e6d3813ba51561564c7cc 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.0E-18 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VV93_RS08675 cd40eb71624e6d3813ba51561564c7cc 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 7.0E-18 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VV93_RS08675 cd40eb71624e6d3813ba51561564c7cc 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 7.0E-18 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VV93_RS08675 cd40eb71624e6d3813ba51561564c7cc 64 SUPERFAMILY SSF143034 2 63 2.88E-19 T 23-04-2016 VV93_RS08675 cd40eb71624e6d3813ba51561564c7cc 64 PANTHER PTHR33343 1 64 2.4E-24 T 23-04-2016 VV93_RS00430 6943dd714c753b5d87c493eec5b176f5 70 Pfam PF13627 Prokaryotic lipoprotein-attachment site 38 60 2.5E-8 T 23-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site VV93_RS13845 25709df957bb100a2bc85003a0092c4e 90 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 6.4E-36 T 23-04-2016 IPR022072 Protein of unknown function DUF3624 VV93_RS10760 4b7c7719c29d0a85ff5d4723c7f253cb 264 SUPERFAMILY SSF55120 1 255 1.15E-93 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS10760 4b7c7719c29d0a85ff5d4723c7f253cb 264 PANTHER PTHR11142 1 259 4.4E-104 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS10760 4b7c7719c29d0a85ff5d4723c7f253cb 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 8.9E-74 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS10760 4b7c7719c29d0a85ff5d4723c7f253cb 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.771 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS10760 4b7c7719c29d0a85ff5d4723c7f253cb 264 PIRSF PIRSF001430 1 256 4.9E-77 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS10760 4b7c7719c29d0a85ff5d4723c7f253cb 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 2.5E-29 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS10760 4b7c7719c29d0a85ff5d4723c7f253cb 264 Pfam PF01416 tRNA pseudouridine synthase 8 103 1.3E-11 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS10760 4b7c7719c29d0a85ff5d4723c7f253cb 264 Gene3D G3DSA:3.30.70.580 1 104 3.1E-39 T 23-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS10760 4b7c7719c29d0a85ff5d4723c7f253cb 264 Gene3D G3DSA:3.30.70.660 106 241 8.9E-44 T 23-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV93_RS09080 0ba9f10e6e441e72ef09bd0bc106e3fd 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 1.1E-53 T 23-04-2016 IPR021212 Domain of unknown function DUF2760 VV93_RS13900 4bc42f11129d3d17d58130117abfe0a2 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 5.0E-49 T 23-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VV93_RS13900 4bc42f11129d3d17d58130117abfe0a2 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 1.1E-59 T 23-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VV93_RS13900 4bc42f11129d3d17d58130117abfe0a2 105 SUPERFAMILY SSF47598 3 103 4.0E-57 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 VV93_RS13900 4bc42f11129d3d17d58130117abfe0a2 105 Gene3D G3DSA:1.10.140.10 2 104 5.3E-63 T 23-04-2016 IPR023453 Methionine repressor MetJ domain VV93_RS13900 4bc42f11129d3d17d58130117abfe0a2 105 Hamap MF_00744 Met repressor [metJ]. 1 105 35.305 T 23-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VV93_RS02745 6abf5d17a6d6bb8ce31404d08ce0832e 245 Gene3D G3DSA:1.10.760.10 16 210 6.4E-62 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS02745 6abf5d17a6d6bb8ce31404d08ce0832e 245 SUPERFAMILY SSF46626 17 208 5.5E-50 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VV93_RS02745 6abf5d17a6d6bb8ce31404d08ce0832e 245 PANTHER PTHR10266:SF3 188 245 7.1E-69 T 23-04-2016 VV93_RS02745 6abf5d17a6d6bb8ce31404d08ce0832e 245 PANTHER PTHR10266:SF3 1 162 7.1E-69 T 23-04-2016 VV93_RS02745 6abf5d17a6d6bb8ce31404d08ce0832e 245 PRINTS PR00603 Cytochrome C1 signature 105 129 9.6E-8 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 VV93_RS02745 6abf5d17a6d6bb8ce31404d08ce0832e 245 PRINTS PR00603 Cytochrome C1 signature 42 61 9.6E-8 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 VV93_RS02745 6abf5d17a6d6bb8ce31404d08ce0832e 245 PRINTS PR00603 Cytochrome C1 signature 210 225 9.6E-8 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 VV93_RS02745 6abf5d17a6d6bb8ce31404d08ce0832e 245 PRINTS PR00603 Cytochrome C1 signature 191 210 9.6E-8 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 VV93_RS02745 6abf5d17a6d6bb8ce31404d08ce0832e 245 PANTHER PTHR10266 188 245 7.1E-69 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 VV93_RS02745 6abf5d17a6d6bb8ce31404d08ce0832e 245 PANTHER PTHR10266 1 162 7.1E-69 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 VV93_RS02745 6abf5d17a6d6bb8ce31404d08ce0832e 245 Gene3D G3DSA:1.20.5.100 214 245 8.4E-10 T 23-04-2016 VV93_RS02745 6abf5d17a6d6bb8ce31404d08ce0832e 245 Pfam PF02167 Cytochrome C1 family 34 244 1.5E-17 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 VV93_RS10755 8fc8e5f9c5c72b071078fb14020ba203 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.393 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VV93_RS10755 8fc8e5f9c5c72b071078fb14020ba203 308 Pfam PF01039 Carboxyl transferase domain 99 240 1.1E-14 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VV93_RS10755 8fc8e5f9c5c72b071078fb14020ba203 308 PANTHER PTHR22855 1 304 1.6E-179 T 23-04-2016 VV93_RS10755 8fc8e5f9c5c72b071078fb14020ba203 308 SUPERFAMILY SSF52096 25 282 2.36E-85 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS10755 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VV93_RS10755 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VV93_RS10755 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VV93_RS10755 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VV93_RS10755 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VV93_RS10755 8fc8e5f9c5c72b071078fb14020ba203 308 Gene3D G3DSA:3.90.226.10 18 283 1.3E-73 T 23-04-2016 IPR029045 ClpP/crotonase-like domain VV93_RS10755 8fc8e5f9c5c72b071078fb14020ba203 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 8.9E-140 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VV93_RS10755 8fc8e5f9c5c72b071078fb14020ba203 308 PANTHER PTHR22855:SF17 1 304 1.6E-179 T 23-04-2016 VV93_RS09690 328e194502ddf334fc60f7d047f0bf56 177 Gene3D G3DSA:1.20.1290.10 14 96 1.0E-33 T 23-04-2016 IPR029032 AhpD-like VV93_RS09690 328e194502ddf334fc60f7d047f0bf56 177 Gene3D G3DSA:1.20.1290.10 145 174 1.0E-33 T 23-04-2016 IPR029032 AhpD-like VV93_RS09690 328e194502ddf334fc60f7d047f0bf56 177 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 55 103 8.4E-14 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VV93_RS09690 328e194502ddf334fc60f7d047f0bf56 177 Pfam PF02627 Carboxymuconolactone decarboxylase family 39 119 5.2E-17 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VV93_RS09690 328e194502ddf334fc60f7d047f0bf56 177 PANTHER PTHR35446 13 169 1.5E-24 T 23-04-2016 VV93_RS09690 328e194502ddf334fc60f7d047f0bf56 177 SUPERFAMILY SSF69118 18 173 2.4E-39 T 23-04-2016 IPR029032 AhpD-like VV93_RS07760 feef8eafe4a59645a5280784dc88a20b 599 Pfam PF00664 ABC transporter transmembrane region 30 312 2.5E-31 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VV93_RS07760 feef8eafe4a59645a5280784dc88a20b 599 SUPERFAMILY SSF90123 12 345 2.22E-56 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VV93_RS07760 feef8eafe4a59645a5280784dc88a20b 599 SMART SM00382 385 572 6.9E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS07760 feef8eafe4a59645a5280784dc88a20b 599 PANTHER PTHR24221 6 60 0.0 T 23-04-2016 VV93_RS07760 feef8eafe4a59645a5280784dc88a20b 599 PANTHER PTHR24221 78 592 0.0 T 23-04-2016 VV93_RS07760 feef8eafe4a59645a5280784dc88a20b 599 Gene3D G3DSA:1.20.1560.10 12 341 1.1E-53 T 23-04-2016 VV93_RS07760 feef8eafe4a59645a5280784dc88a20b 599 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS07760 feef8eafe4a59645a5280784dc88a20b 599 SUPERFAMILY SSF52540 357 592 1.17E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07760 feef8eafe4a59645a5280784dc88a20b 599 PANTHER PTHR24221:SF233 6 60 0.0 T 23-04-2016 VV93_RS07760 feef8eafe4a59645a5280784dc88a20b 599 PANTHER PTHR24221:SF233 78 592 0.0 T 23-04-2016 VV93_RS07760 feef8eafe4a59645a5280784dc88a20b 599 Pfam PF00005 ABC transporter 376 524 3.6E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS07760 feef8eafe4a59645a5280784dc88a20b 599 Gene3D G3DSA:3.40.50.300 361 595 3.2E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06875 7db5873e8bfca15409170c0a008b16ad 223 SMART SM00382 30 218 4.2E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS06875 7db5873e8bfca15409170c0a008b16ad 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS06875 7db5873e8bfca15409170c0a008b16ad 223 Pfam PF00005 ABC transporter 21 167 1.9E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS06875 7db5873e8bfca15409170c0a008b16ad 223 Gene3D G3DSA:3.40.50.300 1 217 2.3E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06875 7db5873e8bfca15409170c0a008b16ad 223 PANTHER PTHR24220:SF430 3 217 4.9E-102 T 23-04-2016 VV93_RS06875 7db5873e8bfca15409170c0a008b16ad 223 PANTHER PTHR24220 3 217 4.9E-102 T 23-04-2016 VV93_RS06875 7db5873e8bfca15409170c0a008b16ad 223 SUPERFAMILY SSF52540 1 218 1.1E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14910 450c1ff03b33440b7aad0ebecb099f60 374 PANTHER PTHR22976:SF17 3 365 9.3E-205 T 23-04-2016 VV93_RS14910 450c1ff03b33440b7aad0ebecb099f60 374 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 366 8.5E-176 T 23-04-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 VV93_RS14910 450c1ff03b33440b7aad0ebecb099f60 374 SUPERFAMILY SSF102114 34 362 1.96E-54 T 23-04-2016 VV93_RS14910 450c1ff03b33440b7aad0ebecb099f60 374 Pfam PF04055 Radical SAM superfamily 81 222 5.1E-9 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VV93_RS14910 450c1ff03b33440b7aad0ebecb099f60 374 PANTHER PTHR22976 3 365 9.3E-205 T 23-04-2016 VV93_RS14910 450c1ff03b33440b7aad0ebecb099f60 374 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 357 1.7E-27 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VV93_RS14910 450c1ff03b33440b7aad0ebecb099f60 374 SMART SM00876 256 359 4.0E-38 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VV93_RS14910 450c1ff03b33440b7aad0ebecb099f60 374 Gene3D G3DSA:3.20.20.70 34 361 2.4E-48 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS06615 e7509ad2042eebdd407489f869b90ba0 305 SUPERFAMILY SSF52540 127 275 2.35E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06615 e7509ad2042eebdd407489f869b90ba0 305 SUPERFAMILY SSF52540 12 59 2.35E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06615 e7509ad2042eebdd407489f869b90ba0 305 Gene3D G3DSA:3.40.50.300 125 277 1.1E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06615 e7509ad2042eebdd407489f869b90ba0 305 Gene3D G3DSA:3.40.50.300 16 37 1.1E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06615 e7509ad2042eebdd407489f869b90ba0 305 Pfam PF13469 Sulfotransferase family 15 263 1.0E-14 T 23-04-2016 VV93_RS10405 3510bcd459b9cc47a70d3cbaa0fa6ae6 166 SUPERFAMILY SSF116960 1 166 1.83E-62 T 23-04-2016 VV93_RS10405 3510bcd459b9cc47a70d3cbaa0fa6ae6 166 Pfam PF03887 YfbU domain 1 166 5.7E-70 T 23-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VV93_RS10405 3510bcd459b9cc47a70d3cbaa0fa6ae6 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 3.0E-96 T 23-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VV93_RS10405 3510bcd459b9cc47a70d3cbaa0fa6ae6 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 39.903 T 23-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VV93_RS10405 3510bcd459b9cc47a70d3cbaa0fa6ae6 166 PIRSF PIRSF006272 1 166 3.5E-76 T 23-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VV93_RS10405 3510bcd459b9cc47a70d3cbaa0fa6ae6 166 Gene3D G3DSA:1.10.287.680 1 52 6.8E-30 T 23-04-2016 IPR023145 YfbU, helix-hairpin domain VV93_RS10405 3510bcd459b9cc47a70d3cbaa0fa6ae6 166 Gene3D G3DSA:1.10.3190.10 53 166 9.2E-46 T 23-04-2016 IPR023146 YfbU, alpha-helical bundle domain VV93_RS09545 c300f91c11e53b1fff59aa377ee4d5f9 364 Gene3D G3DSA:2.130.10.10 279 312 4.1E-5 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VV93_RS09545 c300f91c11e53b1fff59aa377ee4d5f9 364 Gene3D G3DSA:2.130.10.10 221 222 4.1E-5 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VV93_RS09545 c300f91c11e53b1fff59aa377ee4d5f9 364 Gene3D G3DSA:2.130.10.10 64 186 4.1E-5 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VV93_RS09545 c300f91c11e53b1fff59aa377ee4d5f9 364 Pfam PF07433 Protein of unknown function (DUF1513) 71 362 1.8E-113 T 23-04-2016 IPR008311 Uncharacterised conserved protein UCP028101 VV93_RS09545 c300f91c11e53b1fff59aa377ee4d5f9 364 PIRSF PIRSF028101 4 364 4.8E-169 T 23-04-2016 IPR008311 Uncharacterised conserved protein UCP028101 VV93_RS09545 c300f91c11e53b1fff59aa377ee4d5f9 364 SUPERFAMILY SSF50969 251 318 1.02E-9 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VV93_RS09545 c300f91c11e53b1fff59aa377ee4d5f9 364 SUPERFAMILY SSF50969 64 186 1.02E-9 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VV93_RS03375 4d8e9f81756d353e4051092bbcdc5751 291 SUPERFAMILY SSF52980 34 287 1.26E-55 T 23-04-2016 IPR011335 Restriction endonuclease type II-like VV93_RS03375 4d8e9f81756d353e4051092bbcdc5751 291 Gene3D G3DSA:3.40.91.10 10 288 1.4E-79 T 23-04-2016 IPR011544 Restriction endonuclease, type II, Cfr10/BsoB1, core GO:0003677|GO:0009036|GO:0009307 VV93_RS03375 4d8e9f81756d353e4051092bbcdc5751 291 Pfam PF07832 Cfr10I/Bse634I restriction endonuclease 11 289 1.5E-56 T 23-04-2016 IPR012415 Restriction endonuclease, type II, Cfr10I/Bse634I VV93_RS11615 d8fa51446ed2d139323c1be252e22e82 335 Pfam PF02424 ApbE family 31 309 1.0E-84 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 VV93_RS11615 d8fa51446ed2d139323c1be252e22e82 335 PANTHER PTHR30040:SF3 4 335 2.0E-174 T 23-04-2016 VV93_RS11615 d8fa51446ed2d139323c1be252e22e82 335 PIRSF PIRSF006268 1 333 1.4E-94 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 VV93_RS11615 d8fa51446ed2d139323c1be252e22e82 335 PANTHER PTHR30040 4 335 2.0E-174 T 23-04-2016 VV93_RS11615 d8fa51446ed2d139323c1be252e22e82 335 SUPERFAMILY SSF143631 23 332 2.04E-99 T 23-04-2016 IPR003374 ApbE-like domain VV93_RS09745 da3191bdb1d91673a4f0c5d98fcbd27e 546 Gene3D G3DSA:1.10.287.950 298 515 1.0E-50 T 23-04-2016 VV93_RS09745 da3191bdb1d91673a4f0c5d98fcbd27e 546 SUPERFAMILY SSF58104 248 546 5.58E-63 T 23-04-2016 VV93_RS09745 da3191bdb1d91673a4f0c5d98fcbd27e 546 PANTHER PTHR32089 252 546 6.4E-78 T 23-04-2016 VV93_RS09745 da3191bdb1d91673a4f0c5d98fcbd27e 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 298 327 6.0E-8 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VV93_RS09745 da3191bdb1d91673a4f0c5d98fcbd27e 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 6.0E-8 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VV93_RS09745 da3191bdb1d91673a4f0c5d98fcbd27e 546 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 180 1.2E-8 T 23-04-2016 IPR024478 4HB MCP domain VV93_RS09745 da3191bdb1d91673a4f0c5d98fcbd27e 546 SMART SM00283 284 545 2.5E-59 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS09745 da3191bdb1d91673a4f0c5d98fcbd27e 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 346 544 9.8E-43 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS11685 ee9bfcd86805f3bb94cd2f79de161476 197 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 128 1.9E-15 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 VV93_RS11685 ee9bfcd86805f3bb94cd2f79de161476 197 SUPERFAMILY SSF88697 3 186 1.37E-44 T 23-04-2016 IPR015947 PUA-like domain VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 Gene3D G3DSA:1.10.287.130 310 377 7.3E-22 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 SUPERFAMILY SSF103190 40 168 2.12E-34 T 23-04-2016 IPR029151 Periplasmic sensor domain-like VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 Pfam PF17203 Single cache domain 3 37 167 2.3E-19 T 23-04-2016 IPR033463 Single cache domain 3 VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 SMART SM00091 213 279 1.2E-4 T 23-04-2016 IPR000014 PAS domain VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 SUPERFAMILY SSF55785 215 306 2.42E-12 T 23-04-2016 IPR000014 PAS domain VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 319 370 1.3E-9 T 23-04-2016 VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 SMART SM00387 418 537 2.5E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 SUPERFAMILY SSF55874 388 534 9.69E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 Pfam PF00989 PAS fold 215 276 2.7E-7 T 23-04-2016 IPR013767 PAS fold GO:0006355 VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 Gene3D G3DSA:3.30.450.20 219 309 5.0E-10 T 23-04-2016 VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 Gene3D G3DSA:3.30.450.20 33 169 2.9E-44 T 23-04-2016 VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 SUPERFAMILY SSF55890 322 405 6.15E-10 T 23-04-2016 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 PANTHER PTHR24423 87 158 5.0E-97 T 23-04-2016 VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 PANTHER PTHR24423 191 538 5.0E-97 T 23-04-2016 VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 5.7E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 5.7E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 5.7E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 Gene3D G3DSA:3.30.565.10 412 537 1.8E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 422 536 2.8E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 PANTHER PTHR24423:SF487 87 158 5.0E-97 T 23-04-2016 VV93_RS07570 62aa4f567e9398b592337a58a6ddf906 539 PANTHER PTHR24423:SF487 191 538 5.0E-97 T 23-04-2016 VV93_RS02445 ba87e7e18f768f697b5e546dc182541f 177 SUPERFAMILY SSF56349 2 149 4.12E-31 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS02445 ba87e7e18f768f697b5e546dc182541f 177 Pfam PF00589 Phage integrase family 3 144 9.8E-21 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS02445 ba87e7e18f768f697b5e546dc182541f 177 PANTHER PTHR30629 2 163 1.2E-26 T 23-04-2016 VV93_RS02445 ba87e7e18f768f697b5e546dc182541f 177 Gene3D G3DSA:1.10.443.10 3 148 4.0E-25 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS07135 5c5ff8a2c2deb3d377a396e84d9d0fd3 289 PANTHER PTHR30419 1 289 1.3E-109 T 23-04-2016 VV93_RS07135 5c5ff8a2c2deb3d377a396e84d9d0fd3 289 PANTHER PTHR30419:SF4 1 289 1.3E-109 T 23-04-2016 VV93_RS07135 5c5ff8a2c2deb3d377a396e84d9d0fd3 289 SUPERFAMILY SSF46785 1 86 8.86E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS07135 5c5ff8a2c2deb3d377a396e84d9d0fd3 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.5E-21 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS07135 5c5ff8a2c2deb3d377a396e84d9d0fd3 289 Gene3D G3DSA:3.40.190.10 89 175 2.3E-20 T 23-04-2016 VV93_RS07135 5c5ff8a2c2deb3d377a396e84d9d0fd3 289 Pfam PF03466 LysR substrate binding domain 88 287 3.1E-45 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS07135 5c5ff8a2c2deb3d377a396e84d9d0fd3 289 SUPERFAMILY SSF53850 90 288 2.67E-41 T 23-04-2016 VV93_RS07135 5c5ff8a2c2deb3d377a396e84d9d0fd3 289 Gene3D G3DSA:1.10.10.10 1 85 1.2E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS07135 5c5ff8a2c2deb3d377a396e84d9d0fd3 289 Gene3D G3DSA:3.40.190.10 176 260 2.4E-17 T 23-04-2016 VV93_RS07135 5c5ff8a2c2deb3d377a396e84d9d0fd3 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS07135 5c5ff8a2c2deb3d377a396e84d9d0fd3 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS07135 5c5ff8a2c2deb3d377a396e84d9d0fd3 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS10650 191bf719d63fbbe0d66a89c3c74db822 145 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 2.0E-7 T 23-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein VV93_RS10650 191bf719d63fbbe0d66a89c3c74db822 145 PANTHER PTHR37421:SF1 1 145 2.9E-70 T 23-04-2016 VV93_RS10650 191bf719d63fbbe0d66a89c3c74db822 145 PIRSF PIRSF006173 1 144 4.5E-65 T 23-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 VV93_RS10650 191bf719d63fbbe0d66a89c3c74db822 145 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 40.704 T 23-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 VV93_RS10650 191bf719d63fbbe0d66a89c3c74db822 145 PANTHER PTHR37421 1 145 2.9E-70 T 23-04-2016 VV93_RS07450 a7d75c8f4d28c6a1f4f8bc8d10528eb3 90 SUPERFAMILY SSF54975 5 89 3.49E-27 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VV93_RS07450 a7d75c8f4d28c6a1f4f8bc8d10528eb3 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 23-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VV93_RS07450 a7d75c8f4d28c6a1f4f8bc8d10528eb3 90 PANTHER PTHR10029 8 90 1.0E-23 T 23-04-2016 VV93_RS07450 a7d75c8f4d28c6a1f4f8bc8d10528eb3 90 Pfam PF00708 Acylphosphatase 7 89 7.2E-24 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VV93_RS07450 a7d75c8f4d28c6a1f4f8bc8d10528eb3 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 23-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VV93_RS07450 a7d75c8f4d28c6a1f4f8bc8d10528eb3 90 Gene3D G3DSA:3.30.70.100 6 89 4.0E-29 T 23-04-2016 VV93_RS06920 99f4080d232a60908e04b5a498f4561d 415 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 4.0E-91 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 VV93_RS06920 99f4080d232a60908e04b5a498f4561d 415 PANTHER PTHR11496 1 386 5.9E-137 T 23-04-2016 VV93_RS06920 99f4080d232a60908e04b5a498f4561d 415 Gene3D G3DSA:3.40.50.1970 1 179 3.8E-48 T 23-04-2016 VV93_RS06920 99f4080d232a60908e04b5a498f4561d 415 PANTHER PTHR11496:SF68 1 386 5.9E-137 T 23-04-2016 VV93_RS06920 99f4080d232a60908e04b5a498f4561d 415 SUPERFAMILY SSF56796 1 380 5.5E-89 T 23-04-2016 VV93_RS06920 99f4080d232a60908e04b5a498f4561d 415 Gene3D G3DSA:1.20.1090.10 188 381 4.7E-42 T 23-04-2016 VV93_RS06050 5a3710fca4b5f2596d3077613b0c1593 145 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 12 143 1.7E-59 T 23-04-2016 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF VV93_RS06050 5a3710fca4b5f2596d3077613b0c1593 145 PANTHER PTHR30009:SF6 37 145 6.5E-40 T 23-04-2016 VV93_RS06050 5a3710fca4b5f2596d3077613b0c1593 145 Pfam PF03918 Cytochrome C biogenesis protein 34 143 1.3E-41 T 23-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family VV93_RS06050 5a3710fca4b5f2596d3077613b0c1593 145 PANTHER PTHR30009 37 145 6.5E-40 T 23-04-2016 VV93_RS09910 050e3424e6a875f6c73c7f7371bf7323 158 Gene3D G3DSA:3.40.140.10 36 158 3.1E-49 T 23-04-2016 VV93_RS09910 050e3424e6a875f6c73c7f7371bf7323 158 Pfam PF04002 RadC-like JAB domain 38 156 1.4E-44 T 23-04-2016 IPR025657 RadC-like JAB domain VV93_RS09910 050e3424e6a875f6c73c7f7371bf7323 158 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 108 113 - T 23-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site VV93_RS09910 050e3424e6a875f6c73c7f7371bf7323 158 SUPERFAMILY SSF102712 54 125 4.05E-5 T 23-04-2016 VV93_RS09910 050e3424e6a875f6c73c7f7371bf7323 158 TIGRFAM TIGR00608 radc: DNA repair protein RadC 24 158 1.5E-44 T 23-04-2016 IPR001405 RadC protein VV93_RS09910 050e3424e6a875f6c73c7f7371bf7323 158 PANTHER PTHR30471 20 158 7.7E-75 T 23-04-2016 VV93_RS09910 050e3424e6a875f6c73c7f7371bf7323 158 PANTHER PTHR30471:SF5 20 158 7.7E-75 T 23-04-2016 VV93_RS06785 56fe2a5a2ef8a0f972b7b074410dfd07 148 Pfam PF03724 META domain 34 141 1.9E-26 T 23-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ VV93_RS06785 56fe2a5a2ef8a0f972b7b074410dfd07 148 PANTHER PTHR35535:SF1 4 148 8.6E-35 T 23-04-2016 VV93_RS06785 56fe2a5a2ef8a0f972b7b074410dfd07 148 PANTHER PTHR35535 4 148 8.6E-35 T 23-04-2016 VV93_RS05200 be30b87def83392ed57ff1b702d533f2 415 Pfam PF01547 Bacterial extracellular solute-binding protein 39 291 2.3E-21 T 23-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 VV93_RS05200 be30b87def83392ed57ff1b702d533f2 415 PANTHER PTHR30061 9 415 1.3E-113 T 23-04-2016 VV93_RS05200 be30b87def83392ed57ff1b702d533f2 415 SUPERFAMILY SSF53850 20 414 1.79E-63 T 23-04-2016 VV93_RS05200 be30b87def83392ed57ff1b702d533f2 415 Gene3D G3DSA:3.40.190.10 141 294 5.6E-11 T 23-04-2016 VV93_RS05200 be30b87def83392ed57ff1b702d533f2 415 Gene3D G3DSA:3.40.190.10 26 138 9.5E-17 T 23-04-2016 VV93_RS05200 be30b87def83392ed57ff1b702d533f2 415 Gene3D G3DSA:3.40.190.10 295 366 9.5E-17 T 23-04-2016 VV93_RS05200 be30b87def83392ed57ff1b702d533f2 415 PANTHER PTHR30061:SF22 9 415 1.3E-113 T 23-04-2016 VV93_RS13905 e7bdfcbde14910b865bd786ed4535de6 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 23-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VV93_RS13905 e7bdfcbde14910b865bd786ed4535de6 425 SMART SM01274 28 161 1.2E-75 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VV93_RS13905 e7bdfcbde14910b865bd786ed4535de6 425 PANTHER PTHR23406 43 364 6.3E-158 T 23-04-2016 VV93_RS13905 e7bdfcbde14910b865bd786ed4535de6 425 PANTHER PTHR23406 381 425 6.3E-158 T 23-04-2016 VV93_RS13905 e7bdfcbde14910b865bd786ed4535de6 425 Gene3D G3DSA:3.40.50.10380 17 170 9.0E-50 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VV93_RS13905 e7bdfcbde14910b865bd786ed4535de6 425 Gene3D G3DSA:3.40.50.720 171 422 3.2E-84 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS13905 e7bdfcbde14910b865bd786ed4535de6 425 Pfam PF00390 Malic enzyme, N-terminal domain 30 125 4.0E-21 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VV93_RS13905 e7bdfcbde14910b865bd786ed4535de6 425 SUPERFAMILY SSF51735 173 421 3.72E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS13905 e7bdfcbde14910b865bd786ed4535de6 425 SUPERFAMILY SSF53223 20 171 4.03E-52 T 23-04-2016 VV93_RS13905 e7bdfcbde14910b865bd786ed4535de6 425 PIRSF PIRSF000106 25 425 1.2E-71 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VV93_RS13905 e7bdfcbde14910b865bd786ed4535de6 425 SMART SM00919 173 409 2.2E-136 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 VV93_RS13905 e7bdfcbde14910b865bd786ed4535de6 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 366 1.6E-24 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 Gene3D G3DSA:1.10.150.20 4 36 1.1E-5 T 23-04-2016 VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 PANTHER PTHR24031 299 603 2.8E-129 T 23-04-2016 VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 PANTHER PTHR24031 259 282 2.8E-129 T 23-04-2016 VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 PANTHER PTHR24031 626 688 2.8E-129 T 23-04-2016 VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 SMART SM00487 265 459 2.5E-31 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 Gene3D G3DSA:3.40.50.300 454 638 9.5E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 Gene3D G3DSA:3.40.50.300 256 453 7.9E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 SUPERFAMILY SSF52540 508 653 2.27E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 SUPERFAMILY SSF52540 292 342 2.27E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 PANTHER PTHR24031:SF249 299 603 2.8E-129 T 23-04-2016 VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 PANTHER PTHR24031:SF249 259 282 2.8E-129 T 23-04-2016 VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 PANTHER PTHR24031:SF249 626 688 2.8E-129 T 23-04-2016 VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 Pfam PF17191 RecG wedge domain 14 172 8.3E-21 T 23-04-2016 IPR033454 RecG, wedge domain VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 SMART SM00490 505 589 3.0E-23 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 665 3.6E-235 T 23-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 SUPERFAMILY SSF50249 9 174 8.91E-40 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 2.6E-19 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 SUPERFAMILY SSF52540 214 453 1.5E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 Gene3D G3DSA:2.40.50.140 47 142 9.3E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS01165 28ec7ffc02fcb8cf53e95cdd6307ce21 693 Pfam PF00270 DEAD/DEAH box helicase 271 433 2.0E-18 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV93_RS02130 380b35f0e8e6f1f6a73a39020ac8a8b6 287 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 39.506 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 VV93_RS02130 380b35f0e8e6f1f6a73a39020ac8a8b6 287 PANTHER PTHR30448 1 284 1.7E-132 T 23-04-2016 VV93_RS02130 380b35f0e8e6f1f6a73a39020ac8a8b6 287 SUPERFAMILY SSF52540 1 156 1.46E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02130 380b35f0e8e6f1f6a73a39020ac8a8b6 287 PIRSF PIRSF005052 1 286 5.4E-106 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 VV93_RS02130 380b35f0e8e6f1f6a73a39020ac8a8b6 287 PANTHER PTHR30448:SF0 1 284 1.7E-132 T 23-04-2016 VV93_RS02130 380b35f0e8e6f1f6a73a39020ac8a8b6 287 Pfam PF03668 P-loop ATPase protein family 1 284 2.9E-110 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 VV93_RS02130 380b35f0e8e6f1f6a73a39020ac8a8b6 287 Gene3D G3DSA:3.40.50.300 1 155 7.3E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08490 c54ac3eb62df8b80d56e3c364b51605b 80 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 56 1.9E-10 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VV93_RS08490 c54ac3eb62df8b80d56e3c364b51605b 80 SUPERFAMILY SSF143120 1 75 3.23E-14 T 23-04-2016 VV93_RS08490 c54ac3eb62df8b80d56e3c364b51605b 80 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 50 2.5E-13 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VV93_RS08490 c54ac3eb62df8b80d56e3c364b51605b 80 Gene3D G3DSA:3.40.1620.10 1 48 7.0E-10 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VV93_RS17260 93931d406a0df7e4d467cb301f50f102 81 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 15 81 1.3E-15 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 VV93_RS17260 93931d406a0df7e4d467cb301f50f102 81 Gene3D G3DSA:3.40.718.10 6 81 8.3E-20 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VV93_RS17260 93931d406a0df7e4d467cb301f50f102 81 SUPERFAMILY SSF53659 8 81 2.26E-15 T 23-04-2016 VV93_RS17260 93931d406a0df7e4d467cb301f50f102 81 PANTHER PTHR30004:SF5 1 81 7.3E-36 T 23-04-2016 VV93_RS17260 93931d406a0df7e4d467cb301f50f102 81 PANTHER PTHR30004 1 81 7.3E-36 T 23-04-2016 VV93_RS15015 3403f9fd01f749119b9c7efe4d4d9de1 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 40 6.5E-6 T 23-04-2016 IPR001451 Hexapeptide repeat VV93_RS15015 3403f9fd01f749119b9c7efe4d4d9de1 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 129 1.9E-5 T 23-04-2016 IPR001451 Hexapeptide repeat VV93_RS15015 3403f9fd01f749119b9c7efe4d4d9de1 184 SUPERFAMILY SSF51161 4 174 1.66E-43 T 23-04-2016 IPR011004 Trimeric LpxA-like VV93_RS15015 3403f9fd01f749119b9c7efe4d4d9de1 184 PANTHER PTHR13061 1 184 1.8E-73 T 23-04-2016 VV93_RS15015 3403f9fd01f749119b9c7efe4d4d9de1 184 Gene3D G3DSA:2.160.10.10 4 175 5.6E-44 T 23-04-2016 VV93_RS03065 77cbbdf079598fa5d14b138a57b6156a 579 SUPERFAMILY SSF64182 45 462 7.46E-119 T 23-04-2016 VV93_RS03065 77cbbdf079598fa5d14b138a57b6156a 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 21 575 4.7E-156 T 23-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 VV93_RS03065 77cbbdf079598fa5d14b138a57b6156a 579 Pfam PF01368 DHH family 71 205 1.6E-10 T 23-04-2016 IPR001667 DDH domain VV93_RS03065 77cbbdf079598fa5d14b138a57b6156a 579 Pfam PF02272 DHHA1 domain 380 449 1.2E-16 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 VV93_RS03065 77cbbdf079598fa5d14b138a57b6156a 579 PANTHER PTHR30255 1 579 7.7E-222 T 23-04-2016 VV93_RS03065 77cbbdf079598fa5d14b138a57b6156a 579 PANTHER PTHR30255:SF2 1 579 7.7E-222 T 23-04-2016 VV93_RS14940 79b5a9b63c5d95360ab7c6895d97309d 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 6.8E-23 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VV93_RS14940 79b5a9b63c5d95360ab7c6895d97309d 126 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 4.1E-29 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VV93_RS14940 79b5a9b63c5d95360ab7c6895d97309d 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 19.031 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VV93_RS14940 79b5a9b63c5d95360ab7c6895d97309d 126 PANTHER PTHR28259 5 123 4.7E-36 T 23-04-2016 VV93_RS04550 b4af0037640de9605a3b3fc55c211548 248 PANTHER PTHR36307 27 246 2.7E-38 T 23-04-2016 VV93_RS04550 b4af0037640de9605a3b3fc55c211548 248 SMART SM00858 126 188 6.3E-8 T 23-04-2016 IPR013974 SAF domain VV93_RS04550 b4af0037640de9605a3b3fc55c211548 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 49 246 1.1E-47 T 23-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VV93_RS04550 b4af0037640de9605a3b3fc55c211548 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 114 246 6.5E-38 T 23-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VV93_RS08015 a0943a76486d67489a4cfa1b3aa00701 220 Pfam PF11205 Protein of unknown function (DUF2987) 22 166 5.2E-53 T 23-04-2016 IPR021370 Protein of unknown function DUF2987 VV93_RS08050 333c83680534389c7cc23e9b4e32eb74 345 PANTHER PTHR30222 9 342 8.7E-171 T 23-04-2016 VV93_RS08050 333c83680534389c7cc23e9b4e32eb74 345 SUPERFAMILY SSF53850 24 342 2.08E-92 T 23-04-2016 VV93_RS08050 333c83680534389c7cc23e9b4e32eb74 345 Gene3D G3DSA:3.40.190.10 131 267 4.7E-21 T 23-04-2016 VV93_RS08050 333c83680534389c7cc23e9b4e32eb74 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 3.63E-86 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08050 333c83680534389c7cc23e9b4e32eb74 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 3.63E-86 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08050 333c83680534389c7cc23e9b4e32eb74 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 3.63E-86 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08050 333c83680534389c7cc23e9b4e32eb74 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 3.63E-86 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08050 333c83680534389c7cc23e9b4e32eb74 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 3.63E-86 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08050 333c83680534389c7cc23e9b4e32eb74 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 3.63E-86 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08050 333c83680534389c7cc23e9b4e32eb74 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 3.63E-86 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08050 333c83680534389c7cc23e9b4e32eb74 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 3.63E-86 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08050 333c83680534389c7cc23e9b4e32eb74 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 3.63E-86 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08050 333c83680534389c7cc23e9b4e32eb74 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 3.63E-86 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08050 333c83680534389c7cc23e9b4e32eb74 345 PANTHER PTHR30222:SF10 9 342 8.7E-171 T 23-04-2016 VV93_RS08050 333c83680534389c7cc23e9b4e32eb74 345 PIRSF PIRSF019574 1 345 4.9E-123 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV93_RS08050 333c83680534389c7cc23e9b4e32eb74 345 Gene3D G3DSA:3.40.190.10 23 129 2.0E-62 T 23-04-2016 VV93_RS08050 333c83680534389c7cc23e9b4e32eb74 345 Gene3D G3DSA:3.40.190.10 268 311 2.0E-62 T 23-04-2016 VV93_RS08050 333c83680534389c7cc23e9b4e32eb74 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 310 1.8E-40 T 23-04-2016 VV93_RS08450 05736732ddf8d50ee821d249b577c3b0 168 PANTHER PTHR13256 1 167 3.8E-27 T 23-04-2016 VV93_RS08450 05736732ddf8d50ee821d249b577c3b0 168 PANTHER PTHR13256:SF10 1 167 3.8E-27 T 23-04-2016 VV93_RS08450 05736732ddf8d50ee821d249b577c3b0 168 Gene3D G3DSA:3.40.630.30 5 165 1.5E-29 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS08450 05736732ddf8d50ee821d249b577c3b0 168 SUPERFAMILY SSF55729 3 165 9.57E-32 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS08450 05736732ddf8d50ee821d249b577c3b0 168 Pfam PF13302 Acetyltransferase (GNAT) domain 7 143 1.7E-19 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS12930 7b1ed4ca84ac9637c21b9fec3b168965 103 SUPERFAMILY SSF102829 6 94 6.28E-23 T 23-04-2016 IPR007838 Cell division protein ZapA-like VV93_RS12930 7b1ed4ca84ac9637c21b9fec3b168965 103 Pfam PF05164 Cell division protein ZapA 6 89 3.6E-19 T 23-04-2016 IPR007838 Cell division protein ZapA-like VV93_RS12930 7b1ed4ca84ac9637c21b9fec3b168965 103 PANTHER PTHR34981 2 95 1.5E-21 T 23-04-2016 VV93_RS12930 7b1ed4ca84ac9637c21b9fec3b168965 103 PANTHER PTHR34981:SF1 2 95 1.5E-21 T 23-04-2016 VV93_RS04080 733af52926620083e2449771ebed63f5 167 SUPERFAMILY SSF101307 8 160 2.49E-47 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VV93_RS04080 733af52926620083e2449771ebed63f5 167 PANTHER PTHR36305 1 166 2.1E-65 T 23-04-2016 VV93_RS04080 733af52926620083e2449771ebed63f5 167 Pfam PF04608 Phosphatidylglycerophosphatase A 15 159 2.5E-51 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VV93_RS04080 733af52926620083e2449771ebed63f5 167 PIRSF PIRSF006162 5 166 3.6E-52 T 23-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VV93_RS15315 410a96828cb64288bb7895929dad7f95 492 Pfam PF02384 N-6 DNA Methylase 161 460 1.4E-64 T 23-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VV93_RS15315 410a96828cb64288bb7895929dad7f95 492 Pfam PF12161 HsdM N-terminal domain 3 145 3.2E-12 T 23-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VV93_RS15315 410a96828cb64288bb7895929dad7f95 492 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 204 218 1.1E-19 T 23-04-2016 VV93_RS15315 410a96828cb64288bb7895929dad7f95 492 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 180 196 1.1E-19 T 23-04-2016 VV93_RS15315 410a96828cb64288bb7895929dad7f95 492 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 288 300 1.1E-19 T 23-04-2016 VV93_RS15315 410a96828cb64288bb7895929dad7f95 492 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 315 339 1.1E-19 T 23-04-2016 VV93_RS15315 410a96828cb64288bb7895929dad7f95 492 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 291 297 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV93_RS15315 410a96828cb64288bb7895929dad7f95 492 SUPERFAMILY SSF53335 3 491 2.09E-114 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS15315 410a96828cb64288bb7895929dad7f95 492 Gene3D G3DSA:3.40.50.150 182 410 1.2E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS15315 410a96828cb64288bb7895929dad7f95 492 PANTHER PTHR30195:SF2 169 457 3.4E-57 T 23-04-2016 VV93_RS15315 410a96828cb64288bb7895929dad7f95 492 PANTHER PTHR30195 169 457 3.4E-57 T 23-04-2016 VV93_RS05590 e33b5609277679707c4ef1b8efbf33b1 444 SUPERFAMILY SSF47226 332 437 1.27E-17 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS05590 e33b5609277679707c4ef1b8efbf33b1 444 Gene3D G3DSA:1.20.120.160 326 435 5.9E-21 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS05590 e33b5609277679707c4ef1b8efbf33b1 444 Pfam PF01627 Hpt domain 351 427 8.0E-12 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS05805 dc0a4ef781951d5fa1376a33e7319248 132 Gene3D G3DSA:3.10.129.10 8 129 3.0E-42 T 23-04-2016 IPR029069 HotDog domain VV93_RS05805 dc0a4ef781951d5fa1376a33e7319248 132 SUPERFAMILY SSF54637 8 129 2.14E-38 T 23-04-2016 IPR029069 HotDog domain VV93_RS05805 dc0a4ef781951d5fa1376a33e7319248 132 PANTHER PTHR11049:SF5 1 129 1.1E-67 T 23-04-2016 VV93_RS05805 dc0a4ef781951d5fa1376a33e7319248 132 PANTHER PTHR11049 1 129 1.1E-67 T 23-04-2016 VV93_RS05805 dc0a4ef781951d5fa1376a33e7319248 132 Pfam PF03061 Thioesterase superfamily 26 97 2.3E-19 T 23-04-2016 IPR006683 Thioesterase domain VV93_RS10140 c84df4e52055bf70cccced421e443f4d 330 SUPERFAMILY SSF56059 46 205 3.87E-20 T 23-04-2016 VV93_RS10140 c84df4e52055bf70cccced421e443f4d 330 SUPERFAMILY SSF56059 235 283 3.87E-20 T 23-04-2016 VV93_RS10140 c84df4e52055bf70cccced421e443f4d 330 Pfam PF14397 Sugar-transfer associated ATP-grasp 24 298 1.7E-115 T 23-04-2016 VV93_RS10140 c84df4e52055bf70cccced421e443f4d 330 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 8 323 1.0E-169 T 23-04-2016 IPR011758 Alpha-L-glutamate ligase-related protein VV93_RS10140 c84df4e52055bf70cccced421e443f4d 330 Gene3D G3DSA:3.30.470.20 230 288 1.6E-5 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VV93_RS10140 c84df4e52055bf70cccced421e443f4d 330 Gene3D G3DSA:3.30.470.20 43 106 1.8E-5 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VV93_RS10140 c84df4e52055bf70cccced421e443f4d 330 Gene3D G3DSA:3.30.470.20 165 206 3.0E-4 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VV93_RS10955 fe4c48119444a55854ca90b31e655499 295 Gene3D G3DSA:3.40.50.300 22 261 5.2E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10955 fe4c48119444a55854ca90b31e655499 295 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 25 213 1.5E-26 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VV93_RS10955 fe4c48119444a55854ca90b31e655499 295 PANTHER PTHR13696 1 274 4.9E-132 T 23-04-2016 VV93_RS10955 fe4c48119444a55854ca90b31e655499 295 SUPERFAMILY SSF52540 22 283 1.27E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10955 fe4c48119444a55854ca90b31e655499 295 PANTHER PTHR13696:SF3 1 274 4.9E-132 T 23-04-2016 VV93_RS10955 fe4c48119444a55854ca90b31e655499 295 PIRSF PIRSF003092 6 287 4.2E-86 T 23-04-2016 IPR025501 ATP binding protein MinD VV93_RS02755 8134a991993596a5793af1985fd21b80 158 PANTHER PTHR37486 2 158 7.5E-80 T 23-04-2016 VV93_RS02755 8134a991993596a5793af1985fd21b80 158 PIRSF PIRSF005276 3 158 7.0E-63 T 23-04-2016 IPR007481 Stringent starvation protein B VV93_RS02755 8134a991993596a5793af1985fd21b80 158 SUPERFAMILY SSF101738 4 120 1.22E-49 T 23-04-2016 IPR007481 Stringent starvation protein B VV93_RS02755 8134a991993596a5793af1985fd21b80 158 Gene3D G3DSA:2.30.30.220 4 110 4.1E-52 T 23-04-2016 IPR007481 Stringent starvation protein B VV93_RS02755 8134a991993596a5793af1985fd21b80 158 Pfam PF04386 Stringent starvation protein B 9 158 2.6E-41 T 23-04-2016 IPR007481 Stringent starvation protein B VV93_RS02755 8134a991993596a5793af1985fd21b80 158 PANTHER PTHR37486:SF1 2 158 7.5E-80 T 23-04-2016 VV93_RS00685 7010311ab219a375e33fb9d302c647ae 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 286 3.8E-19 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV93_RS00685 7010311ab219a375e33fb9d302c647ae 368 SUPERFAMILY SSF111369 207 284 3.01E-8 T 23-04-2016 VV93_RS00685 7010311ab219a375e33fb9d302c647ae 368 SUPERFAMILY SSF111369 122 175 3.01E-8 T 23-04-2016 VV93_RS00685 7010311ab219a375e33fb9d302c647ae 368 Gene3D G3DSA:2.40.50.100 59 90 4.7E-18 T 23-04-2016 VV93_RS00685 7010311ab219a375e33fb9d302c647ae 368 Gene3D G3DSA:2.40.50.100 210 243 4.7E-18 T 23-04-2016 VV93_RS00685 7010311ab219a375e33fb9d302c647ae 368 PANTHER PTHR30386 27 323 2.5E-55 T 23-04-2016 VV93_RS00685 7010311ab219a375e33fb9d302c647ae 368 PANTHER PTHR30386:SF7 27 323 2.5E-55 T 23-04-2016 VV93_RS00685 7010311ab219a375e33fb9d302c647ae 368 SUPERFAMILY SSF111369 56 130 1.1E-9 T 23-04-2016 VV93_RS07285 120e720cf1090297d037478a9dc7ef16 252 PANTHER PTHR30269 1 248 8.2E-72 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VV93_RS07285 120e720cf1090297d037478a9dc7ef16 252 PANTHER PTHR30269:SF10 1 248 8.2E-72 T 23-04-2016 VV93_RS07285 120e720cf1090297d037478a9dc7ef16 252 Pfam PF01925 Sulfite exporter TauE/SafE 6 245 1.0E-40 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VV93_RS12655 39b9594bf4321e2120294227c1b0693d 376 PIRSF PIRSF015658 1 376 5.0E-176 T 23-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VV93_RS12655 39b9594bf4321e2120294227c1b0693d 376 PANTHER PTHR35806 1 376 2.7E-194 T 23-04-2016 VV93_RS12655 39b9594bf4321e2120294227c1b0693d 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 2.3E-169 T 23-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VV93_RS12655 39b9594bf4321e2120294227c1b0693d 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 9.0E-157 T 23-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 1.2E-154 T 23-04-2016 VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 1.2E-154 T 23-04-2016 VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 1.2E-154 T 23-04-2016 VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 1.2E-154 T 23-04-2016 VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 1.2E-154 T 23-04-2016 VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 1.2E-154 T 23-04-2016 VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 1.2E-154 T 23-04-2016 VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 1.2E-154 T 23-04-2016 VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 1.2E-154 T 23-04-2016 VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 1.2E-154 T 23-04-2016 VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 1.2E-154 T 23-04-2016 VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 1.2E-154 T 23-04-2016 VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 1.2E-154 T 23-04-2016 VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 PANTHER PTHR30128:SF10 26 288 1.2E-77 T 23-04-2016 VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 PANTHER PTHR30128 26 288 1.2E-77 T 23-04-2016 VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 ProSitePatterns PS01068 OmpA-like domain. 220 264 - T 23-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 Pfam PF00691 OmpA family 187 282 4.9E-19 T 23-04-2016 IPR006665 OmpA-like domain VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 SUPERFAMILY SSF103088 157 287 2.22E-27 T 23-04-2016 IPR006665 OmpA-like domain VV93_RS05665 07d62250433da42d71eea9be6ee65468 293 Gene3D G3DSA:3.30.1330.60 185 288 3.2E-27 T 23-04-2016 IPR006665 OmpA-like domain VV93_RS07210 0c65795414da70ff26a1dd89abfb2616 221 Gene3D G3DSA:3.30.65.10 174 212 2.9E-4 T 23-04-2016 VV93_RS07210 0c65795414da70ff26a1dd89abfb2616 221 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 3.0E-37 T 23-04-2016 IPR024402 Domain of unknown function DUF2726 VV93_RS07210 0c65795414da70ff26a1dd89abfb2616 221 PIRSF PIRSF028063 1 221 4.3E-143 T 23-04-2016 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger VV93_RS10465 40ad7a61488851d72ec9d1a51d13b504 414 Pfam PF12704 MacB-like periplasmic core domain 30 241 5.2E-16 T 23-04-2016 IPR025857 MacB-like periplasmic core domain VV93_RS10465 40ad7a61488851d72ec9d1a51d13b504 414 Pfam PF02687 FtsX-like permease family 274 407 1.6E-17 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VV93_RS10465 40ad7a61488851d72ec9d1a51d13b504 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 2.4E-162 T 23-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VV93_RS10465 40ad7a61488851d72ec9d1a51d13b504 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 1.4E-232 T 23-04-2016 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 VV93_RS10465 40ad7a61488851d72ec9d1a51d13b504 414 PANTHER PTHR30489 5 414 2.6E-77 T 23-04-2016 VV93_RS18355 02918f4522d479a54bcecbd86d623298 193 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 122 140 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 VV93_RS18355 02918f4522d479a54bcecbd86d623298 193 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 137 155 2.3E-34 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 VV93_RS18355 02918f4522d479a54bcecbd86d623298 193 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 166 184 2.3E-34 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 VV93_RS18355 02918f4522d479a54bcecbd86d623298 193 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 92 110 2.3E-34 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 VV93_RS18355 02918f4522d479a54bcecbd86d623298 193 Gene3D G3DSA:3.40.50.300 41 192 1.6E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS18355 02918f4522d479a54bcecbd86d623298 193 Pfam PF07724 AAA domain (Cdc48 subfamily) 87 192 1.4E-36 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VV93_RS18355 02918f4522d479a54bcecbd86d623298 193 PANTHER PTHR11638 1 193 7.7E-136 T 23-04-2016 VV93_RS18355 02918f4522d479a54bcecbd86d623298 193 PANTHER PTHR11638:SF18 1 193 7.7E-136 T 23-04-2016 VV93_RS18355 02918f4522d479a54bcecbd86d623298 193 SUPERFAMILY SSF52540 37 192 7.88E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03385 cfca6b7d9c5f18374d5869f0702089a8 84 SUPERFAMILY SSF54862 4 72 3.35E-17 T 23-04-2016 VV93_RS03385 cfca6b7d9c5f18374d5869f0702089a8 84 Gene3D G3DSA:3.30.70.20 4 73 3.8E-17 T 23-04-2016 VV93_RS03385 cfca6b7d9c5f18374d5869f0702089a8 84 PANTHER PTHR24960 1 81 2.1E-27 T 23-04-2016 VV93_RS03385 cfca6b7d9c5f18374d5869f0702089a8 84 PANTHER PTHR24960:SF38 1 81 2.1E-27 T 23-04-2016 VV93_RS03385 cfca6b7d9c5f18374d5869f0702089a8 84 Pfam PF00037 4Fe-4S binding domain 5 25 6.5E-6 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV93_RS03385 cfca6b7d9c5f18374d5869f0702089a8 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV93_RS12470 7dc55e49041c8c61547659d8a0b85f6e 293 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 3 266 8.7E-113 T 23-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 VV93_RS12470 7dc55e49041c8c61547659d8a0b85f6e 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 165 175 8.4E-14 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VV93_RS12470 7dc55e49041c8c61547659d8a0b85f6e 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 181 189 8.4E-14 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VV93_RS12470 7dc55e49041c8c61547659d8a0b85f6e 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 8.4E-14 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VV93_RS12470 7dc55e49041c8c61547659d8a0b85f6e 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 8.4E-14 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VV93_RS12470 7dc55e49041c8c61547659d8a0b85f6e 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 8.4E-14 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VV93_RS12470 7dc55e49041c8c61547659d8a0b85f6e 293 SUPERFAMILY SSF52374 3 281 2.52E-85 T 23-04-2016 VV93_RS12470 7dc55e49041c8c61547659d8a0b85f6e 293 PANTHER PTHR11451 1 218 3.2E-108 T 23-04-2016 VV93_RS12470 7dc55e49041c8c61547659d8a0b85f6e 293 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 253 3.2E-41 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VV93_RS12470 7dc55e49041c8c61547659d8a0b85f6e 293 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 3 285 40.859 T 23-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 VV93_RS12470 7dc55e49041c8c61547659d8a0b85f6e 293 PANTHER PTHR11451:SF35 1 218 3.2E-108 T 23-04-2016 VV93_RS12470 7dc55e49041c8c61547659d8a0b85f6e 293 Gene3D G3DSA:3.40.50.620 155 286 1.2E-17 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS12470 7dc55e49041c8c61547659d8a0b85f6e 293 Gene3D G3DSA:3.40.50.620 2 144 4.1E-38 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS13340 dabd94512c1a8a317311e2f9def7b9ea 408 PANTHER PTHR30349 117 408 2.0E-36 T 23-04-2016 VV93_RS13340 dabd94512c1a8a317311e2f9def7b9ea 408 Pfam PF00589 Phage integrase family 217 382 2.0E-32 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS13340 dabd94512c1a8a317311e2f9def7b9ea 408 Gene3D G3DSA:1.10.443.10 216 384 2.7E-37 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS13340 dabd94512c1a8a317311e2f9def7b9ea 408 SUPERFAMILY SSF56349 108 384 5.0E-50 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS13340 dabd94512c1a8a317311e2f9def7b9ea 408 Pfam PF13356 Domain of unknown function (DUF4102) 8 100 5.8E-13 T 23-04-2016 IPR025166 Domain of unknown function DUF4102 VV93_RS02140 b75ce06394affe2f39a71a000e14285b 95 PANTHER PTHR33231 1 95 3.1E-41 T 23-04-2016 VV93_RS02140 b75ce06394affe2f39a71a000e14285b 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 3.2E-28 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VV93_RS02140 b75ce06394affe2f39a71a000e14285b 95 SUPERFAMILY SSF69754 1 95 1.29E-34 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VV93_RS02140 b75ce06394affe2f39a71a000e14285b 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 5.2E-33 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VV93_RS02140 b75ce06394affe2f39a71a000e14285b 95 Gene3D G3DSA:3.30.160.100 1 95 2.7E-37 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VV93_RS01220 63021f32ef7b2c367fc479f3f92187d5 862 Gene3D G3DSA:2.40.170.20 171 230 4.0E-82 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VV93_RS01220 63021f32ef7b2c367fc479f3f92187d5 862 Gene3D G3DSA:2.40.170.20 280 862 4.0E-82 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VV93_RS01220 63021f32ef7b2c367fc479f3f92187d5 862 SUPERFAMILY SSF56935 37 188 2.14E-94 T 23-04-2016 VV93_RS01220 63021f32ef7b2c367fc479f3f92187d5 862 SUPERFAMILY SSF56935 216 234 2.14E-94 T 23-04-2016 VV93_RS01220 63021f32ef7b2c367fc479f3f92187d5 862 SUPERFAMILY SSF56935 298 862 2.14E-94 T 23-04-2016 VV93_RS01220 63021f32ef7b2c367fc479f3f92187d5 862 Pfam PF00593 TonB dependent receptor 541 860 1.3E-30 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VV93_RS01220 63021f32ef7b2c367fc479f3f92187d5 862 PANTHER PTHR30069 12 857 3.0E-115 T 23-04-2016 VV93_RS01220 63021f32ef7b2c367fc479f3f92187d5 862 PANTHER PTHR30069:SF7 12 857 3.0E-115 T 23-04-2016 VV93_RS01220 63021f32ef7b2c367fc479f3f92187d5 862 Gene3D G3DSA:2.170.130.10 27 170 2.1E-36 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VV93_RS01220 63021f32ef7b2c367fc479f3f92187d5 862 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 167 1.5E-24 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VV93_RS22570 f019fbec944ae71c939d10c8c0523585 173 PANTHER PTHR11606:SF1 1 173 2.1E-76 T 23-04-2016 VV93_RS22570 f019fbec944ae71c939d10c8c0523585 173 PANTHER PTHR11606 1 173 2.1E-76 T 23-04-2016 VV93_RS22570 f019fbec944ae71c939d10c8c0523585 173 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 1 173 5.3E-61 T 23-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VV93_RS07615 a10350f613242c0fe4012e6443ea1f65 130 Pfam PF13671 AAA domain 7 107 5.8E-21 T 23-04-2016 VV93_RS07615 a10350f613242c0fe4012e6443ea1f65 130 SUPERFAMILY SSF52540 9 108 1.12E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07615 a10350f613242c0fe4012e6443ea1f65 130 PANTHER PTHR13308:SF11 6 128 4.6E-29 T 23-04-2016 VV93_RS07615 a10350f613242c0fe4012e6443ea1f65 130 PANTHER PTHR13308 6 128 4.6E-29 T 23-04-2016 VV93_RS07615 a10350f613242c0fe4012e6443ea1f65 130 Gene3D G3DSA:3.40.50.300 6 129 2.3E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07425 666277f32edc96ac508f19ca8521ed2b 208 PRINTS PR01021 OMPA domain signature 116 131 1.4E-7 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV93_RS07425 666277f32edc96ac508f19ca8521ed2b 208 PRINTS PR01021 OMPA domain signature 131 147 1.4E-7 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV93_RS07425 666277f32edc96ac508f19ca8521ed2b 208 PRINTS PR01021 OMPA domain signature 86 108 1.4E-7 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV93_RS07425 666277f32edc96ac508f19ca8521ed2b 208 Gene3D G3DSA:3.30.1330.60 80 188 1.8E-29 T 23-04-2016 IPR006665 OmpA-like domain VV93_RS07425 666277f32edc96ac508f19ca8521ed2b 208 SUPERFAMILY SSF103088 55 184 2.09E-29 T 23-04-2016 IPR006665 OmpA-like domain VV93_RS07425 666277f32edc96ac508f19ca8521ed2b 208 Gene3D G3DSA:4.10.1080.10 40 75 5.1E-6 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 VV93_RS07425 666277f32edc96ac508f19ca8521ed2b 208 Pfam PF00691 OmpA family 85 180 2.0E-17 T 23-04-2016 IPR006665 OmpA-like domain VV93_RS07425 666277f32edc96ac508f19ca8521ed2b 208 PANTHER PTHR30128:SF15 32 204 1.9E-61 T 23-04-2016 VV93_RS07425 666277f32edc96ac508f19ca8521ed2b 208 PANTHER PTHR30128 32 204 1.9E-61 T 23-04-2016 VV93_RS06235 0f67260f66722c2c51bdd61a3b638971 247 Gene3D G3DSA:3.40.50.720 8 243 1.3E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS06235 0f67260f66722c2c51bdd61a3b638971 247 PANTHER PTHR24322:SF337 17 149 9.2E-75 T 23-04-2016 VV93_RS06235 0f67260f66722c2c51bdd61a3b638971 247 PANTHER PTHR24322 165 197 9.2E-75 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06235 0f67260f66722c2c51bdd61a3b638971 247 PANTHER PTHR24322:SF337 165 197 9.2E-75 T 23-04-2016 VV93_RS06235 0f67260f66722c2c51bdd61a3b638971 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 1.0E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06235 0f67260f66722c2c51bdd61a3b638971 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 1.0E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06235 0f67260f66722c2c51bdd61a3b638971 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 1.0E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06235 0f67260f66722c2c51bdd61a3b638971 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VV93_RS06235 0f67260f66722c2c51bdd61a3b638971 247 PANTHER PTHR24322 17 149 9.2E-75 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06235 0f67260f66722c2c51bdd61a3b638971 247 Pfam PF00106 short chain dehydrogenase 13 208 7.4E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06235 0f67260f66722c2c51bdd61a3b638971 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 4.6E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06235 0f67260f66722c2c51bdd61a3b638971 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 4.6E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06235 0f67260f66722c2c51bdd61a3b638971 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 4.6E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06235 0f67260f66722c2c51bdd61a3b638971 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 4.6E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06235 0f67260f66722c2c51bdd61a3b638971 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 4.6E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06235 0f67260f66722c2c51bdd61a3b638971 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 178 0.0061 T 23-04-2016 VV93_RS06235 0f67260f66722c2c51bdd61a3b638971 247 SUPERFAMILY SSF51735 9 242 1.01E-64 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS10090 7e6084bf93312687699a164634854e67 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 2.3E-146 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VV93_RS10090 7e6084bf93312687699a164634854e67 334 Gene3D G3DSA:1.10.8.60 189 260 3.5E-33 T 23-04-2016 VV93_RS10090 7e6084bf93312687699a164634854e67 334 PANTHER PTHR13779:SF25 1 333 3.3E-187 T 23-04-2016 VV93_RS10090 7e6084bf93312687699a164634854e67 334 Gene3D G3DSA:3.40.50.300 25 182 3.2E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10090 7e6084bf93312687699a164634854e67 334 SMART SM00382 56 189 2.0E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS10090 7e6084bf93312687699a164634854e67 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.2E-33 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VV93_RS10090 7e6084bf93312687699a164634854e67 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 4.0E-39 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VV93_RS10090 7e6084bf93312687699a164634854e67 334 SUPERFAMILY SSF52540 25 256 1.98E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10090 7e6084bf93312687699a164634854e67 334 PANTHER PTHR13779 1 333 3.3E-187 T 23-04-2016 VV93_RS10090 7e6084bf93312687699a164634854e67 334 Gene3D G3DSA:1.10.10.10 262 333 2.4E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS10090 7e6084bf93312687699a164634854e67 334 SUPERFAMILY SSF46785 262 332 2.39E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS10090 7e6084bf93312687699a164634854e67 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 1.8E-116 T 23-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 VV93_RS10090 7e6084bf93312687699a164634854e67 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 182.417 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 Gene3D G3DSA:3.40.710.10 232 314 2.3E-131 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 Gene3D G3DSA:3.40.710.10 432 822 2.3E-131 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 768 1.5E-168 T 23-04-2016 VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 PANTHER PTHR32282:SF5 431 622 1.7E-272 T 23-04-2016 VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 PANTHER PTHR32282:SF5 751 835 1.7E-272 T 23-04-2016 VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 SUPERFAMILY SSF56601 432 620 8.85E-117 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 SUPERFAMILY SSF56601 211 233 8.85E-117 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 SUPERFAMILY SSF56601 262 314 8.85E-117 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 SUPERFAMILY SSF56601 650 821 8.85E-117 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 SUPERFAMILY SSF53955 43 255 5.06E-77 T 23-04-2016 IPR023346 Lysozyme-like domain VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 PANTHER PTHR32282 2 311 1.7E-272 T 23-04-2016 VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 PANTHER PTHR32282 650 734 1.7E-272 T 23-04-2016 VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 PANTHER PTHR32282 431 622 1.7E-272 T 23-04-2016 VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 Gene3D G3DSA:2.40.50.140 348 431 3.1E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 PANTHER PTHR32282 751 835 1.7E-272 T 23-04-2016 VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 Pfam PF17092 Penicillin-binding protein OB-like domain 317 435 3.0E-31 T 23-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 Gene3D G3DSA:1.10.3810.10 55 231 8.9E-74 T 23-04-2016 VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 Pfam PF00912 Transglycosylase 55 229 6.0E-63 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 Pfam PF00905 Penicillin binding protein transpeptidase domain 438 726 5.0E-29 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 PANTHER PTHR32282:SF5 2 311 1.7E-272 T 23-04-2016 VV93_RS13835 22ce1c25b109cecbf4633ba31be3b4ca 837 PANTHER PTHR32282:SF5 650 734 1.7E-272 T 23-04-2016 VV93_RS06220 3733b53ea9e2120f9fff5f3b740767fc 1024 Pfam PF01336 OB-fold nucleic acid binding domain 934 1003 1.2E-7 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VV93_RS06220 3733b53ea9e2120f9fff5f3b740767fc 1024 PANTHER PTHR32294 1 1011 0.0 T 23-04-2016 VV93_RS06220 3733b53ea9e2120f9fff5f3b740767fc 1024 Pfam PF02811 PHP domain 8 102 4.0E-9 T 23-04-2016 IPR004013 PHP domain GO:0003824 VV93_RS06220 3733b53ea9e2120f9fff5f3b740767fc 1024 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 4.2E-145 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS06220 3733b53ea9e2120f9fff5f3b740767fc 1024 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1024 13.51 T 23-04-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS06220 3733b53ea9e2120f9fff5f3b740767fc 1024 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 969 1.3E-156 T 23-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS06220 3733b53ea9e2120f9fff5f3b740767fc 1024 PANTHER PTHR32294:SF4 1 1011 0.0 T 23-04-2016 VV93_RS06220 3733b53ea9e2120f9fff5f3b740767fc 1024 SMART SM00481 4 73 5.3E-4 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 VV93_RS06220 3733b53ea9e2120f9fff5f3b740767fc 1024 Pfam PF14579 Helix-hairpin-helix motif 768 854 1.6E-11 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS03390 ebf4b01fb0b316c51d52fd59fb919207 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VV93_RS03390 ebf4b01fb0b316c51d52fd59fb919207 466 PANTHER PTHR30217:SF6 2 211 7.8E-238 T 23-04-2016 VV93_RS03390 ebf4b01fb0b316c51d52fd59fb919207 466 PANTHER PTHR30217:SF6 258 466 7.8E-238 T 23-04-2016 VV93_RS03390 ebf4b01fb0b316c51d52fd59fb919207 466 Pfam PF01136 Peptidase family U32 80 355 1.1E-95 T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VV93_RS03390 ebf4b01fb0b316c51d52fd59fb919207 466 Pfam PF16325 Peptidase family U32 C-terminal domain 371 452 5.8E-21 T 23-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VV93_RS03390 ebf4b01fb0b316c51d52fd59fb919207 466 PANTHER PTHR30217 2 211 7.8E-238 T 23-04-2016 VV93_RS03390 ebf4b01fb0b316c51d52fd59fb919207 466 PANTHER PTHR30217 258 466 7.8E-238 T 23-04-2016 VV93_RS15295 1dc3c99f84fc64d8e94fb97409f2685d 344 PANTHER PTHR35810 4 344 2.7E-178 T 23-04-2016 VV93_RS15295 1dc3c99f84fc64d8e94fb97409f2685d 344 PIRSF PIRSF015268 3 344 5.2E-149 T 23-04-2016 IPR011204 Virulence protein RhuM-like VV93_RS15295 1dc3c99f84fc64d8e94fb97409f2685d 344 PANTHER PTHR35810:SF1 4 344 2.7E-178 T 23-04-2016 VV93_RS15295 1dc3c99f84fc64d8e94fb97409f2685d 344 Pfam PF13310 Virulence protein RhuM family 69 322 1.1E-114 T 23-04-2016 IPR011204 Virulence protein RhuM-like VV93_RS04120 f91be6ca1ad91558a1a67cbfe4538de0 208 PANTHER PTHR13136:SF4 18 207 9.7E-54 T 23-04-2016 VV93_RS04120 f91be6ca1ad91558a1a67cbfe4538de0 208 SUPERFAMILY SSF53474 9 179 7.56E-26 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS04120 f91be6ca1ad91558a1a67cbfe4538de0 208 PANTHER PTHR13136 18 207 9.7E-54 T 23-04-2016 IPR026555 KAT8 regulatory NSL complex subunit 3/Testis-expressed sequence 30 protein VV93_RS04120 f91be6ca1ad91558a1a67cbfe4538de0 208 Pfam PF12697 Alpha/beta hydrolase family 16 134 1.0E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VV93_RS04120 f91be6ca1ad91558a1a67cbfe4538de0 208 Gene3D G3DSA:3.40.50.1820 12 181 5.3E-30 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS08690 d35af37a8c0e916c0cc2bb5c9ac07310 327 Pfam PF11383 Protein of unknown function (DUF3187) 23 322 4.9E-117 T 23-04-2016 IPR021523 Protein of unknown function DUF3187 VV93_RS08690 d35af37a8c0e916c0cc2bb5c9ac07310 327 SUPERFAMILY SSF56935 153 322 9.52E-6 T 23-04-2016 VV93_RS05770 c2349a08b5ea724374657ba0f393e67e 306 SUPERFAMILY SSF161098 89 291 6.0E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS05770 c2349a08b5ea724374657ba0f393e67e 306 Gene3D G3DSA:1.10.3720.10 90 301 4.4E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS05770 c2349a08b5ea724374657ba0f393e67e 306 PANTHER PTHR30465:SF74 1 306 5.1E-151 T 23-04-2016 VV93_RS05770 c2349a08b5ea724374657ba0f393e67e 306 PANTHER PTHR30465 1 306 5.1E-151 T 23-04-2016 VV93_RS05770 c2349a08b5ea724374657ba0f393e67e 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.1E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS15135 3f57d003f010bc6e6c22dcd57d918778 507 SUPERFAMILY SSF54211 2 169 2.05E-30 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VV93_RS15135 3f57d003f010bc6e6c22dcd57d918778 507 SMART SM00382 210 390 9.0E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS15135 3f57d003f010bc6e6c22dcd57d918778 507 Gene3D G3DSA:3.40.50.300 189 385 3.7E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15135 3f57d003f010bc6e6c22dcd57d918778 507 Gene3D G3DSA:3.30.230.10 6 153 1.2E-27 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV93_RS15135 3f57d003f010bc6e6c22dcd57d918778 507 PANTHER PTHR32039:SF7 1 502 3.4E-260 T 23-04-2016 IPR004482 Mg chelatase-related protein VV93_RS15135 3f57d003f010bc6e6c22dcd57d918778 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 2.1E-90 T 23-04-2016 IPR000523 Magnesium chelatase ChlI domain VV93_RS15135 3f57d003f010bc6e6c22dcd57d918778 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 2.0E-209 T 23-04-2016 IPR004482 Mg chelatase-related protein VV93_RS15135 3f57d003f010bc6e6c22dcd57d918778 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 5.3E-48 T 23-04-2016 VV93_RS15135 3f57d003f010bc6e6c22dcd57d918778 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 2.5E-31 T 23-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain VV93_RS15135 3f57d003f010bc6e6c22dcd57d918778 507 SUPERFAMILY SSF52540 187 500 2.91E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15135 3f57d003f010bc6e6c22dcd57d918778 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.6E-5 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 VV93_RS15135 3f57d003f010bc6e6c22dcd57d918778 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.6E-5 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 VV93_RS15135 3f57d003f010bc6e6c22dcd57d918778 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.6E-5 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 VV93_RS15135 3f57d003f010bc6e6c22dcd57d918778 507 PANTHER PTHR32039 1 502 3.4E-260 T 23-04-2016 VV93_RS13175 820213a654669372dad33fa24ab4059d 145 Pfam PF13551 Winged helix-turn helix 24 83 5.7E-14 T 23-04-2016 VV93_RS13175 820213a654669372dad33fa24ab4059d 145 SUPERFAMILY SSF46689 16 132 1.16E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS13175 820213a654669372dad33fa24ab4059d 145 Pfam PF13592 Winged helix-turn helix 99 145 3.3E-12 T 23-04-2016 IPR025959 Winged helix-turn helix domain VV93_RS13175 820213a654669372dad33fa24ab4059d 145 Gene3D G3DSA:1.10.10.60 20 89 1.8E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS14505 ee14484e30af3ebbfc532e45e0d1a817 567 PANTHER PTHR11819 4 307 2.9E-240 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VV93_RS14505 ee14484e30af3ebbfc532e45e0d1a817 567 PANTHER PTHR11819 340 567 2.9E-240 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VV93_RS14505 ee14484e30af3ebbfc532e45e0d1a817 567 PANTHER PTHR11819:SF159 4 307 2.9E-240 T 23-04-2016 VV93_RS14505 ee14484e30af3ebbfc532e45e0d1a817 567 PANTHER PTHR11819:SF159 340 567 2.9E-240 T 23-04-2016 VV93_RS14505 ee14484e30af3ebbfc532e45e0d1a817 567 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 558 2.0E-262 T 23-04-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily VV93_RS14505 ee14484e30af3ebbfc532e45e0d1a817 567 Pfam PF00474 Sodium:solute symporter family 33 302 2.7E-33 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VV93_RS14505 ee14484e30af3ebbfc532e45e0d1a817 567 Pfam PF00474 Sodium:solute symporter family 368 489 2.9E-19 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VV93_RS04415 1bd461259a588c075a1b65cea7a4307f 202 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 2 201 27.233 T 23-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VV93_RS04415 1bd461259a588c075a1b65cea7a4307f 202 PANTHER PTHR30634:SF11 3 202 4.0E-35 T 23-04-2016 VV93_RS04415 1bd461259a588c075a1b65cea7a4307f 202 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 13 200 2.6E-39 T 23-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VV93_RS04415 1bd461259a588c075a1b65cea7a4307f 202 Gene3D G3DSA:2.50.20.10 13 202 2.7E-61 T 23-04-2016 VV93_RS04415 1bd461259a588c075a1b65cea7a4307f 202 Pfam PF03550 Outer membrane lipoprotein LolB 42 199 7.9E-45 T 23-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VV93_RS04415 1bd461259a588c075a1b65cea7a4307f 202 SUPERFAMILY SSF89392 18 201 2.39E-49 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX VV93_RS04415 1bd461259a588c075a1b65cea7a4307f 202 PANTHER PTHR30634 3 202 4.0E-35 T 23-04-2016 VV93_RS11415 02798cc8dbc833a415a95e541489006b 380 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 5 379 41.843 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 VV93_RS11415 02798cc8dbc833a415a95e541489006b 380 Pfam PF02684 Lipid-A-disaccharide synthetase 8 374 1.0E-129 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 VV93_RS11415 02798cc8dbc833a415a95e541489006b 380 Gene3D G3DSA:3.40.50.2000 162 345 7.6E-5 T 23-04-2016 VV93_RS11415 02798cc8dbc833a415a95e541489006b 380 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 377 8.5E-145 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 VV93_RS11415 02798cc8dbc833a415a95e541489006b 380 PANTHER PTHR30372:SF0 2 379 3.8E-133 T 23-04-2016 VV93_RS11415 02798cc8dbc833a415a95e541489006b 380 PANTHER PTHR30372 2 379 3.8E-133 T 23-04-2016 VV93_RS11415 02798cc8dbc833a415a95e541489006b 380 SUPERFAMILY SSF53756 7 380 7.99E-29 T 23-04-2016 VV93_RS05685 dff030101bbaf8e50ffd0ae92dd5c123 230 PANTHER PTHR30586:SF0 1 220 1.2E-142 T 23-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 VV93_RS05685 dff030101bbaf8e50ffd0ae92dd5c123 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 2.8E-66 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VV93_RS05685 dff030101bbaf8e50ffd0ae92dd5c123 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 208 7.8E-88 T 23-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 VV93_RS05685 dff030101bbaf8e50ffd0ae92dd5c123 230 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 28.186 T 23-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 VV93_RS05685 dff030101bbaf8e50ffd0ae92dd5c123 230 PIRSF PIRSF006102 1 219 4.8E-79 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VV93_RS05685 dff030101bbaf8e50ffd0ae92dd5c123 230 PANTHER PTHR30586 1 220 1.2E-142 T 23-04-2016 VV93_RS08540 38d63cd7c1121ba300ce810431433650 105 SUPERFAMILY SSF50118 3 105 1.05E-30 T 23-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor VV93_RS08540 38d63cd7c1121ba300ce810431433650 105 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 18 104 2.0E-36 T 23-04-2016 IPR002712 Toxin CcdB GO:0006276|GO:0008657 VV93_RS08540 38d63cd7c1121ba300ce810431433650 105 Gene3D G3DSA:2.30.30.110 3 105 5.2E-37 T 23-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor VV93_RS08540 38d63cd7c1121ba300ce810431433650 105 Pfam PF01845 CcdB protein 3 104 3.1E-34 T 23-04-2016 IPR002712 Toxin CcdB GO:0006276|GO:0008657 VV93_RS10340 86b435b890f0fd49683b85c7c399dfaf 268 Gene3D G3DSA:3.60.10.10 1 267 1.4E-83 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VV93_RS10340 86b435b890f0fd49683b85c7c399dfaf 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 260 3.5E-27 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VV93_RS10340 86b435b890f0fd49683b85c7c399dfaf 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 6.8E-86 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 VV93_RS10340 86b435b890f0fd49683b85c7c399dfaf 268 SUPERFAMILY SSF56219 1 268 6.81E-85 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VV93_RS10340 86b435b890f0fd49683b85c7c399dfaf 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 1.4E-98 T 23-04-2016 VV93_RS10340 86b435b890f0fd49683b85c7c399dfaf 268 PANTHER PTHR22748:SF7 1 268 2.2E-132 T 23-04-2016 VV93_RS10340 86b435b890f0fd49683b85c7c399dfaf 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 23-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 VV93_RS10340 86b435b890f0fd49683b85c7c399dfaf 268 PANTHER PTHR22748 1 268 2.2E-132 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 VV93_RS10340 86b435b890f0fd49683b85c7c399dfaf 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 23-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 VV93_RS17215 0cdbd59ed12df63e5dd1944dc1d884d7 346 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 2 346 8.2E-101 T 23-04-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein VV93_RS17215 0cdbd59ed12df63e5dd1944dc1d884d7 346 PANTHER PTHR33362 1 156 1.3E-129 T 23-04-2016 VV93_RS17215 0cdbd59ed12df63e5dd1944dc1d884d7 346 PANTHER PTHR33362 232 346 1.3E-129 T 23-04-2016 VV93_RS17215 0cdbd59ed12df63e5dd1944dc1d884d7 346 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 343 3.7E-50 T 23-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VV93_RS17215 0cdbd59ed12df63e5dd1944dc1d884d7 346 PANTHER PTHR33362:SF1 1 156 1.3E-129 T 23-04-2016 VV93_RS17215 0cdbd59ed12df63e5dd1944dc1d884d7 346 PANTHER PTHR33362:SF1 232 346 1.3E-129 T 23-04-2016 VV93_RS14340 7f9e4f0b1475144657a1c6c9ef550e53 345 Gene3D G3DSA:1.10.1040.10 192 338 8.3E-58 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VV93_RS14340 7f9e4f0b1475144657a1c6c9ef550e53 345 PIRSF PIRSF000114 9 344 2.1E-94 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VV93_RS14340 7f9e4f0b1475144657a1c6c9ef550e53 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VV93_RS14340 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 8.0E-44 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VV93_RS14340 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 8.0E-44 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VV93_RS14340 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 8.0E-44 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VV93_RS14340 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 8.0E-44 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VV93_RS14340 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 8.0E-44 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VV93_RS14340 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 8.0E-44 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VV93_RS14340 7f9e4f0b1475144657a1c6c9ef550e53 345 SUPERFAMILY SSF48179 191 343 6.89E-56 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VV93_RS14340 7f9e4f0b1475144657a1c6c9ef550e53 345 Gene3D G3DSA:3.40.50.720 17 190 2.6E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS14340 7f9e4f0b1475144657a1c6c9ef550e53 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.003 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VV93_RS14340 7f9e4f0b1475144657a1c6c9ef550e53 345 SUPERFAMILY SSF51735 15 190 3.38E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS14340 7f9e4f0b1475144657a1c6c9ef550e53 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 171 2.8E-47 T 23-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VV93_RS14340 7f9e4f0b1475144657a1c6c9ef550e53 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 2.4E-51 T 23-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VV93_RS14340 7f9e4f0b1475144657a1c6c9ef550e53 345 PANTHER PTHR11728 5 343 1.3E-135 T 23-04-2016 VV93_RS13085 86f0235c8f18130aec1ed6b9a585fdd0 208 SMART SM00478 52 201 2.7E-5 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VV93_RS13085 86f0235c8f18130aec1ed6b9a585fdd0 208 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 50 172 6.8E-5 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VV93_RS13085 86f0235c8f18130aec1ed6b9a585fdd0 208 Gene3D G3DSA:1.10.340.30 47 152 1.8E-21 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VV93_RS13085 86f0235c8f18130aec1ed6b9a585fdd0 208 Gene3D G3DSA:1.10.1670.10 154 202 9.4E-6 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VV93_RS13085 86f0235c8f18130aec1ed6b9a585fdd0 208 PANTHER PTHR10242:SF0 47 204 2.6E-25 T 23-04-2016 VV93_RS13085 86f0235c8f18130aec1ed6b9a585fdd0 208 PANTHER PTHR10242 47 204 2.6E-25 T 23-04-2016 VV93_RS13085 86f0235c8f18130aec1ed6b9a585fdd0 208 SUPERFAMILY SSF48150 34 201 9.94E-31 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VV93_RS03470 cf57ce13fe492e59c7fd1216a67b1b72 250 Gene3D G3DSA:3.20.20.380 3 248 8.0E-90 T 23-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 VV93_RS03470 cf57ce13fe492e59c7fd1216a67b1b72 250 Pfam PF03932 CutC family 4 205 1.5E-83 T 23-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 VV93_RS03470 cf57ce13fe492e59c7fd1216a67b1b72 250 PANTHER PTHR12598 1 250 5.1E-98 T 23-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 VV93_RS03470 cf57ce13fe492e59c7fd1216a67b1b72 250 PANTHER PTHR12598:SF0 1 250 5.1E-98 T 23-04-2016 VV93_RS03470 cf57ce13fe492e59c7fd1216a67b1b72 250 SUPERFAMILY SSF110395 4 247 1.2E-71 T 23-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 VV93_RS03470 cf57ce13fe492e59c7fd1216a67b1b72 250 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 247 41.714 T 23-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 VV93_RS11120 2642694928fd7eada0103b681dc1c2fd 115 Gene3D G3DSA:3.40.30.10 2 115 3.5E-45 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS11120 2642694928fd7eada0103b681dc1c2fd 115 PANTHER PTHR30041:SF3 2 115 4.4E-49 T 23-04-2016 VV93_RS11120 2642694928fd7eada0103b681dc1c2fd 115 Pfam PF03960 ArsC family 6 113 3.1E-20 T 23-04-2016 IPR006660 Arsenate reductase-like VV93_RS11120 2642694928fd7eada0103b681dc1c2fd 115 PANTHER PTHR30041 2 115 4.4E-49 T 23-04-2016 VV93_RS11120 2642694928fd7eada0103b681dc1c2fd 115 SUPERFAMILY SSF52833 2 114 2.11E-37 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS11120 2642694928fd7eada0103b681dc1c2fd 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 113 4.2E-32 T 23-04-2016 IPR006504 Transcriptional regulator Spx/MgsR VV93_RS06310 69780aea834f325866062acb05fb6508 215 Gene3D G3DSA:1.20.1260.10 1 19 3.9E-74 T 23-04-2016 IPR012347 Ferritin-related VV93_RS06310 69780aea834f325866062acb05fb6508 215 Gene3D G3DSA:1.20.1260.10 67 213 3.9E-74 T 23-04-2016 IPR012347 Ferritin-related VV93_RS06310 69780aea834f325866062acb05fb6508 215 SUPERFAMILY SSF47240 67 213 1.03E-61 T 23-04-2016 IPR009078 Ferritin-like superfamily VV93_RS06310 69780aea834f325866062acb05fb6508 215 SUPERFAMILY SSF47240 1 19 1.03E-61 T 23-04-2016 IPR009078 Ferritin-like superfamily VV93_RS06310 69780aea834f325866062acb05fb6508 215 PIRSF PIRSF020736 1 215 9.6E-76 T 23-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 VV93_RS06310 69780aea834f325866062acb05fb6508 215 PANTHER PTHR42637 1 213 4.2E-85 T 23-04-2016 VV93_RS06310 69780aea834f325866062acb05fb6508 215 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 1 210 1.3E-99 T 23-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 VV93_RS06310 69780aea834f325866062acb05fb6508 215 PANTHER PTHR42637:SF1 1 213 4.2E-85 T 23-04-2016 VV93_RS09100 db8e42106e2d88154ae91d620efa1552 179 Gene3D G3DSA:3.40.630.30 3 156 1.1E-25 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS09100 db8e42106e2d88154ae91d620efa1552 179 SUPERFAMILY SSF55729 3 158 1.45E-25 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS09100 db8e42106e2d88154ae91d620efa1552 179 PANTHER PTHR13256 1 163 4.4E-17 T 23-04-2016 VV93_RS09100 db8e42106e2d88154ae91d620efa1552 179 PANTHER PTHR13256:SF10 1 163 4.4E-17 T 23-04-2016 VV93_RS09100 db8e42106e2d88154ae91d620efa1552 179 Pfam PF13302 Acetyltransferase (GNAT) domain 7 146 1.4E-16 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS15170 2cdc677246ebee0ecbcbce5e1298b054 401 Pfam PF07690 Major Facilitator Superfamily 13 349 1.5E-35 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV93_RS15170 2cdc677246ebee0ecbcbce5e1298b054 401 Gene3D G3DSA:1.20.1250.20 9 179 2.6E-21 T 23-04-2016 VV93_RS15170 2cdc677246ebee0ecbcbce5e1298b054 401 SUPERFAMILY SSF103473 6 373 4.58E-51 T 23-04-2016 IPR020846 Major facilitator superfamily domain VV93_RS15170 2cdc677246ebee0ecbcbce5e1298b054 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 368 3.6E-81 T 23-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 VV93_RS15170 2cdc677246ebee0ecbcbce5e1298b054 401 Gene3D G3DSA:1.20.1250.20 196 377 1.8E-11 T 23-04-2016 VV93_RS15170 2cdc677246ebee0ecbcbce5e1298b054 401 PANTHER PTHR23502:SF28 1 368 1.6E-183 T 23-04-2016 VV93_RS15170 2cdc677246ebee0ecbcbce5e1298b054 401 PANTHER PTHR23502 1 368 1.6E-183 T 23-04-2016 VV93_RS00675 20fcbb07e87a9371cb00dc49087c6ccc 51 SUPERFAMILY SSF56349 1 47 4.12E-10 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS00675 20fcbb07e87a9371cb00dc49087c6ccc 51 Gene3D G3DSA:1.10.443.10 1 48 3.3E-8 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS10445 46ac3b928ad649a04f5744eeaaeb87fa 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 327 2.3E-91 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 VV93_RS10445 46ac3b928ad649a04f5744eeaaeb87fa 335 PANTHER PTHR30160 1 329 6.5E-98 T 23-04-2016 VV93_RS10445 46ac3b928ad649a04f5744eeaaeb87fa 335 SUPERFAMILY SSF52540 50 198 6.77E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10445 46ac3b928ad649a04f5744eeaaeb87fa 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 328 40.28 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 VV93_RS10445 46ac3b928ad649a04f5744eeaaeb87fa 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 323 6.2E-111 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 VV93_RS10445 46ac3b928ad649a04f5744eeaaeb87fa 335 Gene3D G3DSA:3.40.50.300 158 170 3.1E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10445 46ac3b928ad649a04f5744eeaaeb87fa 335 Gene3D G3DSA:3.40.50.300 49 110 3.1E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10445 46ac3b928ad649a04f5744eeaaeb87fa 335 PANTHER PTHR30160:SF13 1 329 6.5E-98 T 23-04-2016 VV93_RS12125 e1cb512dc7e22137d702acf3f3e0cbe7 687 SMART SM00267 231 402 2.6E-62 T 23-04-2016 IPR000160 GGDEF domain VV93_RS12125 e1cb512dc7e22137d702acf3f3e0cbe7 687 SUPERFAMILY SSF141868 418 668 2.48E-89 T 23-04-2016 IPR001633 EAL domain VV93_RS12125 e1cb512dc7e22137d702acf3f3e0cbe7 687 PANTHER PTHR33121 354 687 4.6E-91 T 23-04-2016 VV93_RS12125 e1cb512dc7e22137d702acf3f3e0cbe7 687 SMART SM00052 412 660 7.2E-107 T 23-04-2016 IPR001633 EAL domain VV93_RS12125 e1cb512dc7e22137d702acf3f3e0cbe7 687 Gene3D G3DSA:3.20.20.450 415 667 5.4E-96 T 23-04-2016 IPR001633 EAL domain VV93_RS12125 e1cb512dc7e22137d702acf3f3e0cbe7 687 Pfam PF00990 Diguanylate cyclase, GGDEF domain 242 398 3.5E-46 T 23-04-2016 IPR000160 GGDEF domain VV93_RS12125 e1cb512dc7e22137d702acf3f3e0cbe7 687 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 238 400 1.8E-42 T 23-04-2016 IPR000160 GGDEF domain VV93_RS12125 e1cb512dc7e22137d702acf3f3e0cbe7 687 Gene3D G3DSA:3.30.70.270 243 410 5.7E-55 T 23-04-2016 VV93_RS12125 e1cb512dc7e22137d702acf3f3e0cbe7 687 Pfam PF00563 EAL domain 420 655 9.2E-74 T 23-04-2016 IPR001633 EAL domain VV93_RS12125 e1cb512dc7e22137d702acf3f3e0cbe7 687 PANTHER PTHR33121:SF13 354 687 4.6E-91 T 23-04-2016 VV93_RS12125 e1cb512dc7e22137d702acf3f3e0cbe7 687 SUPERFAMILY SSF55073 247 404 8.63E-48 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS07160 be0d1989d484c395a7629f1d532f2755 244 Pfam PF14559 Tetratricopeptide repeat 152 198 9.6E-7 T 23-04-2016 VV93_RS07160 be0d1989d484c395a7629f1d532f2755 244 PANTHER PTHR23083 35 201 5.9E-20 T 23-04-2016 VV93_RS07160 be0d1989d484c395a7629f1d532f2755 244 Pfam PF13431 Tetratricopeptide repeat 94 125 1.4E-7 T 23-04-2016 VV93_RS07160 be0d1989d484c395a7629f1d532f2755 244 Gene3D G3DSA:1.25.40.10 34 197 3.7E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS07160 be0d1989d484c395a7629f1d532f2755 244 SMART SM00028 38 71 33.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS07160 be0d1989d484c395a7629f1d532f2755 244 SMART SM00028 106 139 41.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS07160 be0d1989d484c395a7629f1d532f2755 244 SMART SM00028 142 175 4.3 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS07160 be0d1989d484c395a7629f1d532f2755 244 SMART SM00028 72 105 0.65 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VV93_RS07160 be0d1989d484c395a7629f1d532f2755 244 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 240 1.3E-87 T 23-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW VV93_RS07160 be0d1989d484c395a7629f1d532f2755 244 SUPERFAMILY SSF48452 38 199 1.29E-21 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS03605 2f547532b7c6d517094711694be52b4c 316 Pfam PF13413 Helix-turn-helix domain 25 83 6.7E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS03605 2f547532b7c6d517094711694be52b4c 316 Pfam PF13464 Domain of unknown function (DUF4115) 241 314 1.8E-23 T 23-04-2016 IPR025194 Domain of unknown function DUF4115 VV93_RS03605 2f547532b7c6d517094711694be52b4c 316 SUPERFAMILY SSF47413 17 93 9.48E-7 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS03605 2f547532b7c6d517094711694be52b4c 316 PANTHER PTHR34475 8 315 2.4E-42 T 23-04-2016 VV93_RS03605 2f547532b7c6d517094711694be52b4c 316 PANTHER PTHR34475:SF1 8 315 2.4E-42 T 23-04-2016 VV93_RS03605 2f547532b7c6d517094711694be52b4c 316 Gene3D G3DSA:1.10.260.40 17 90 2.4E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS15025 0729e051fef7750ad925a6e78cbaac71 277 PANTHER PTHR21089:SF2 1 275 1.5E-146 T 23-04-2016 VV93_RS15025 0729e051fef7750ad925a6e78cbaac71 277 SUPERFAMILY SSF53223 6 105 8.63E-32 T 23-04-2016 VV93_RS15025 0729e051fef7750ad925a6e78cbaac71 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 2.9E-24 T 23-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS15025 0729e051fef7750ad925a6e78cbaac71 277 SUPERFAMILY SSF51735 106 273 7.08E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS15025 0729e051fef7750ad925a6e78cbaac71 277 Gene3D G3DSA:3.40.192.10 2 111 1.5E-37 T 23-04-2016 VV93_RS15025 0729e051fef7750ad925a6e78cbaac71 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 1.0E-87 T 23-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS15025 0729e051fef7750ad925a6e78cbaac71 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 6.8E-14 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VV93_RS15025 0729e051fef7750ad925a6e78cbaac71 277 Gene3D G3DSA:3.40.50.720 112 248 1.7E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS15025 0729e051fef7750ad925a6e78cbaac71 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 32.573 T 23-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS15025 0729e051fef7750ad925a6e78cbaac71 277 PANTHER PTHR21089 1 275 1.5E-146 T 23-04-2016 VV93_RS11725 5a682558fb84685f62f19e98fbdc7f75 367 Pfam PF03562 MltA specific insert domain 107 252 5.2E-36 T 23-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 VV93_RS11725 5a682558fb84685f62f19e98fbdc7f75 367 PANTHER PTHR30124 7 365 1.0E-116 T 23-04-2016 VV93_RS11725 5a682558fb84685f62f19e98fbdc7f75 367 Gene3D G3DSA:2.40.40.10 161 351 8.8E-43 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VV93_RS11725 5a682558fb84685f62f19e98fbdc7f75 367 Gene3D G3DSA:2.40.40.10 97 156 7.4E-8 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VV93_RS11725 5a682558fb84685f62f19e98fbdc7f75 367 SMART SM00925 119 252 1.9E-62 T 23-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 VV93_RS11725 5a682558fb84685f62f19e98fbdc7f75 367 SUPERFAMILY SSF50685 20 350 5.93E-100 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VV93_RS11725 5a682558fb84685f62f19e98fbdc7f75 367 Pfam PF06725 3D domain 272 348 1.8E-20 T 23-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 VV93_RS11725 5a682558fb84685f62f19e98fbdc7f75 367 PANTHER PTHR30124:SF0 7 365 1.0E-116 T 23-04-2016 VV93_RS11960 d3cec92b02b9218c02cf71640ef48558 416 SUPERFAMILY SSF52540 166 402 2.6E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11960 d3cec92b02b9218c02cf71640ef48558 416 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 167 368 6.9E-9 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VV93_RS11960 d3cec92b02b9218c02cf71640ef48558 416 Gene3D G3DSA:3.40.50.300 166 400 1.9E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11960 d3cec92b02b9218c02cf71640ef48558 416 PANTHER PTHR13696 167 412 3.8E-23 T 23-04-2016 VV93_RS10540 dd0310852443d068231227fdc1f0e74e 386 Gene3D G3DSA:3.40.50.10770 1 140 4.9E-62 T 23-04-2016 VV93_RS10540 dd0310852443d068231227fdc1f0e74e 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 8.0E-169 T 23-04-2016 IPR015093 Protein of unknown function DUF1887 VV93_RS10540 dd0310852443d068231227fdc1f0e74e 386 SUPERFAMILY SSF52980 1 382 6.97E-121 T 23-04-2016 IPR011335 Restriction endonuclease type II-like VV93_RS10540 dd0310852443d068231227fdc1f0e74e 386 Gene3D G3DSA:1.10.10.680 162 240 2.8E-52 T 23-04-2016 VV93_RS10540 dd0310852443d068231227fdc1f0e74e 386 Gene3D G3DSA:3.40.1350.10 241 382 6.1E-60 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 VV93_RS05890 963da4144edc656f3d4ee74a68f15acf 255 Gene3D G3DSA:3.30.460.10 27 126 5.3E-12 T 23-04-2016 VV93_RS05890 963da4144edc656f3d4ee74a68f15acf 255 Pfam PF01909 Nucleotidyltransferase domain 36 72 2.3E-5 T 23-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VV93_RS05890 963da4144edc656f3d4ee74a68f15acf 255 SUPERFAMILY SSF81301 35 80 1.24E-7 T 23-04-2016 VV93_RS14865 cb4d3a6b7ebc2d39ab56c98412232973 223 PIRSF PIRSF006324 1 214 5.0E-51 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VV93_RS14865 cb4d3a6b7ebc2d39ab56c98412232973 223 Pfam PF01810 LysE type translocator 16 212 1.3E-36 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VV93_RS14865 cb4d3a6b7ebc2d39ab56c98412232973 223 PANTHER PTHR30086:SF13 2 218 1.9E-86 T 23-04-2016 VV93_RS14865 cb4d3a6b7ebc2d39ab56c98412232973 223 PANTHER PTHR30086 2 218 1.9E-86 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VV93_RS03710 385bfce738c87c29158831356f96e523 209 Pfam PF09335 SNARE associated Golgi protein 50 158 2.8E-13 T 23-04-2016 IPR032816 SNARE associated Golgi protein VV93_RS03710 385bfce738c87c29158831356f96e523 209 PANTHER PTHR30353 4 198 5.7E-18 T 23-04-2016 IPR032818 DedA family VV93_RS11540 2ce3cd581d746e3823b56014aa356883 528 Pfam PF03806 AbgT putative transporter family 19 526 4.1E-229 T 23-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VV93_RS11540 2ce3cd581d746e3823b56014aa356883 528 PANTHER PTHR30282:SF0 5 528 7.9E-291 T 23-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VV93_RS11540 2ce3cd581d746e3823b56014aa356883 528 PANTHER PTHR30282 5 528 7.9E-291 T 23-04-2016 VV93_RS15370 7e86773070c4488000347add6c4bad2f 46 PANTHER PTHR14503 1 45 3.7E-22 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS15370 7e86773070c4488000347add6c4bad2f 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 45 5.6E-26 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS15370 7e86773070c4488000347add6c4bad2f 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 41 4.0E-14 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS15370 7e86773070c4488000347add6c4bad2f 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 3 46 16.38 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS15370 7e86773070c4488000347add6c4bad2f 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 4 23 - T 23-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS15370 7e86773070c4488000347add6c4bad2f 46 Pfam PF00468 Ribosomal protein L34 3 45 5.1E-24 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS10865 d55325e4e314a1dcc75e4f09a7cfaa4b 404 Gene3D G3DSA:1.25.40.10 203 288 1.8E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS10865 d55325e4e314a1dcc75e4f09a7cfaa4b 404 PANTHER PTHR30009 93 313 1.6E-24 T 23-04-2016 VV93_RS10865 d55325e4e314a1dcc75e4f09a7cfaa4b 404 SUPERFAMILY SSF48452 161 266 2.47E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS10865 d55325e4e314a1dcc75e4f09a7cfaa4b 404 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 116 6.0E-32 T 23-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI VV93_RS10865 d55325e4e314a1dcc75e4f09a7cfaa4b 404 Gene3D G3DSA:1.25.40.10 157 202 5.8E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS10865 d55325e4e314a1dcc75e4f09a7cfaa4b 404 Pfam PF14559 Tetratricopeptide repeat 176 244 3.0E-8 T 23-04-2016 VV93_RS10865 d55325e4e314a1dcc75e4f09a7cfaa4b 404 PANTHER PTHR30009:SF10 93 313 1.6E-24 T 23-04-2016 VV93_RS03365 fb76a5785eb573670e5685705443763b 964 Pfam PF03175 DNA polymerase type B, organellar and viral 410 578 6.1E-10 T 23-04-2016 IPR004868 DNA-directed DNA polymerase, family B, mitochondria/virus GO:0000166|GO:0003677|GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS03365 fb76a5785eb573670e5685705443763b 964 SUPERFAMILY SSF56672 409 677 2.67E-14 T 23-04-2016 VV93_RS10440 7b6a346ccea0ff071df3b0ea4637e27b 59 Pfam PF03966 Trm112p-like protein 2 41 3.0E-11 T 23-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 VV93_RS10440 7b6a346ccea0ff071df3b0ea4637e27b 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.232 T 23-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 VV93_RS10440 7b6a346ccea0ff071df3b0ea4637e27b 59 PANTHER PTHR33505 1 57 3.2E-25 T 23-04-2016 VV93_RS10440 7b6a346ccea0ff071df3b0ea4637e27b 59 SUPERFAMILY SSF158997 1 53 3.27E-20 T 23-04-2016 VV93_RS10440 7b6a346ccea0ff071df3b0ea4637e27b 59 Gene3D G3DSA:2.20.25.10 8 57 1.1E-24 T 23-04-2016 VV93_RS04260 0ec8173a953cb3ea82e5380600f372c5 156 PANTHER PTHR33603 1 155 2.7E-72 T 23-04-2016 VV93_RS04260 0ec8173a953cb3ea82e5380600f372c5 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 6.9E-49 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS04260 0ec8173a953cb3ea82e5380600f372c5 156 Gene3D G3DSA:3.40.1280.10 2 155 3.3E-55 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VV93_RS04260 0ec8173a953cb3ea82e5380600f372c5 156 SUPERFAMILY SSF75217 1 154 2.09E-50 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases VV93_RS04260 0ec8173a953cb3ea82e5380600f372c5 156 PIRSF PIRSF004505 1 155 1.8E-43 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS04260 0ec8173a953cb3ea82e5380600f372c5 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 1.2E-78 T 23-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS04260 0ec8173a953cb3ea82e5380600f372c5 156 PANTHER PTHR33603:SF1 1 155 2.7E-72 T 23-04-2016 VV93_RS04260 0ec8173a953cb3ea82e5380600f372c5 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.66 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS02315 202cf917f9b47ea4db8f7305d9625be3 260 PANTHER PTHR23054:SF21 53 240 2.6E-26 T 23-04-2016 VV93_RS02315 202cf917f9b47ea4db8f7305d9625be3 260 PANTHER PTHR23054 53 240 2.6E-26 T 23-04-2016 VV93_RS02315 202cf917f9b47ea4db8f7305d9625be3 260 Pfam PF04784 Protein of unknown function, DUF547 88 198 2.1E-24 T 23-04-2016 IPR006869 Domain of unknown function DUF547 VV93_RS05400 0d69f50a58c012c4bf8b50a434ae64eb 193 SUPERFAMILY SSF56925 29 191 2.56E-11 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VV93_RS05400 0d69f50a58c012c4bf8b50a434ae64eb 193 Gene3D G3DSA:2.40.160.20 27 178 2.0E-9 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VV93_RS05400 0d69f50a58c012c4bf8b50a434ae64eb 193 Pfam PF13505 Outer membrane protein beta-barrel domain 7 193 2.4E-15 T 23-04-2016 IPR027385 Outer membrane protein beta-barrel VV93_RS12935 87dd121aa39854fef29f4bf69711399f 199 PANTHER PTHR23407 1 196 5.4E-62 T 23-04-2016 VV93_RS12935 87dd121aa39854fef29f4bf69711399f 199 PANTHER PTHR23407:SF1 1 196 5.4E-62 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VV93_RS12935 87dd121aa39854fef29f4bf69711399f 199 SUPERFAMILY SSF100950 5 197 2.51E-58 T 23-04-2016 VV93_RS12935 87dd121aa39854fef29f4bf69711399f 199 PIRSF PIRSF006806 3 192 1.2E-34 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VV93_RS12935 87dd121aa39854fef29f4bf69711399f 199 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 189 2.3E-52 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VV93_RS12935 87dd121aa39854fef29f4bf69711399f 199 Gene3D G3DSA:3.40.50.10420 6 195 2.6E-57 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain VV93_RS12935 87dd121aa39854fef29f4bf69711399f 199 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 6 189 1.6E-43 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VV93_RS13565 e4403217aa8a6700f5428380fa4b9b0a 216 Pfam PF04612 Type II secretion system (T2SS), protein M 8 75 1.5E-8 T 23-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 VV93_RS13565 e4403217aa8a6700f5428380fa4b9b0a 216 Gene3D G3DSA:3.30.70.60 113 189 3.4E-4 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VV93_RS10135 0702a605ad2757121a48beec34e3d8f5 501 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 190 498 1.1E-134 T 23-04-2016 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase VV93_RS10135 0702a605ad2757121a48beec34e3d8f5 501 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 183 5.2E-59 T 23-04-2016 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices VV93_RS13830 09abb848a7845d23630c84e0e55aab48 335 Pfam PF11104 Type IV pilus assembly protein PilM; 8 323 1.8E-48 T 23-04-2016 IPR005883 Type IV pilus assembly protein PilM VV93_RS13830 09abb848a7845d23630c84e0e55aab48 335 PANTHER PTHR32432 1 330 8.4E-51 T 23-04-2016 VV93_RS13830 09abb848a7845d23630c84e0e55aab48 335 Gene3D G3DSA:3.30.420.40 3 99 2.7E-5 T 23-04-2016 VV93_RS13830 09abb848a7845d23630c84e0e55aab48 335 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 5 325 1.9E-70 T 23-04-2016 IPR005883 Type IV pilus assembly protein PilM VV93_RS13830 09abb848a7845d23630c84e0e55aab48 335 PANTHER PTHR32432:SF3 1 330 8.4E-51 T 23-04-2016 VV93_RS13830 09abb848a7845d23630c84e0e55aab48 335 SUPERFAMILY SSF53067 46 165 7.12E-7 T 23-04-2016 VV93_RS13830 09abb848a7845d23630c84e0e55aab48 335 PIRSF PIRSF019169 1 327 4.2E-89 T 23-04-2016 IPR005883 Type IV pilus assembly protein PilM VV93_RS02200 af7e49758ade8040dc4fe9fba9e14796 105 SUPERFAMILY SSF52091 2 96 3.34E-15 T 23-04-2016 IPR002645 STAS domain VV93_RS02200 af7e49758ade8040dc4fe9fba9e14796 105 PANTHER PTHR35849 1 100 3.2E-37 T 23-04-2016 VV93_RS02200 af7e49758ade8040dc4fe9fba9e14796 105 Gene3D G3DSA:3.30.750.24 14 96 4.2E-12 T 23-04-2016 IPR002645 STAS domain VV93_RS02200 af7e49758ade8040dc4fe9fba9e14796 105 PANTHER PTHR35849:SF1 1 100 3.2E-37 T 23-04-2016 VV93_RS02200 af7e49758ade8040dc4fe9fba9e14796 105 Pfam PF13466 STAS domain 14 92 9.3E-18 T 23-04-2016 IPR002645 STAS domain VV93_RS09860 24e13cfee358178eeb5c4b650464c3a1 282 PANTHER PTHR10799 44 279 3.5E-13 T 23-04-2016 VV93_RS09860 24e13cfee358178eeb5c4b650464c3a1 282 PANTHER PTHR10799:SF710 44 279 3.5E-13 T 23-04-2016 VV93_RS09860 24e13cfee358178eeb5c4b650464c3a1 282 SMART SM00267 126 281 2.0E-15 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09860 24e13cfee358178eeb5c4b650464c3a1 282 Pfam PF00990 Diguanylate cyclase, GGDEF domain 137 279 2.2E-26 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09860 24e13cfee358178eeb5c4b650464c3a1 282 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 134 279 1.5E-26 T 23-04-2016 IPR000160 GGDEF domain VV93_RS09860 24e13cfee358178eeb5c4b650464c3a1 282 SUPERFAMILY SSF55073 142 280 1.33E-26 T 23-04-2016 IPR029787 Nucleotide cyclase VV93_RS09860 24e13cfee358178eeb5c4b650464c3a1 282 Gene3D G3DSA:3.30.70.270 139 279 3.8E-28 T 23-04-2016 VV93_RS01620 62517615265df2aa0f6467f32b01e8bc 420 PANTHER PTHR23417:SF2 1 112 2.1E-111 T 23-04-2016 VV93_RS01620 62517615265df2aa0f6467f32b01e8bc 420 PANTHER PTHR23417:SF2 191 417 2.1E-111 T 23-04-2016 VV93_RS01620 62517615265df2aa0f6467f32b01e8bc 420 PANTHER PTHR23417:SF2 131 141 2.1E-111 T 23-04-2016 VV93_RS01620 62517615265df2aa0f6467f32b01e8bc 420 Pfam PF00534 Glycosyl transferases group 1 247 374 1.5E-6 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 VV93_RS01620 62517615265df2aa0f6467f32b01e8bc 420 PANTHER PTHR23417 1 112 2.1E-111 T 23-04-2016 VV93_RS01620 62517615265df2aa0f6467f32b01e8bc 420 PANTHER PTHR23417 191 417 2.1E-111 T 23-04-2016 VV93_RS01620 62517615265df2aa0f6467f32b01e8bc 420 PANTHER PTHR23417 131 141 2.1E-111 T 23-04-2016 VV93_RS01620 62517615265df2aa0f6467f32b01e8bc 420 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 212 1.8E-60 T 23-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 VV93_RS01620 62517615265df2aa0f6467f32b01e8bc 420 SUPERFAMILY SSF53756 60 402 3.39E-15 T 23-04-2016 VV93_RS21755 c452bfdbb7d2d61216b4c4346c97fe5b 155 SUPERFAMILY SSF49785 11 110 1.28E-7 T 23-04-2016 IPR008979 Galactose-binding domain-like VV93_RS06660 7f457103f3da138b94c4e984130643b0 320 PANTHER PTHR30465:SF65 171 314 7.0E-149 T 23-04-2016 VV93_RS06660 7f457103f3da138b94c4e984130643b0 320 PANTHER PTHR30465:SF65 1 146 7.0E-149 T 23-04-2016 VV93_RS06660 7f457103f3da138b94c4e984130643b0 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 2.7E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06660 7f457103f3da138b94c4e984130643b0 320 Gene3D G3DSA:1.10.3720.10 71 137 2.5E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06660 7f457103f3da138b94c4e984130643b0 320 Gene3D G3DSA:1.10.3720.10 177 306 2.5E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06660 7f457103f3da138b94c4e984130643b0 320 SUPERFAMILY SSF161098 69 137 3.76E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06660 7f457103f3da138b94c4e984130643b0 320 SUPERFAMILY SSF161098 177 298 3.76E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06660 7f457103f3da138b94c4e984130643b0 320 PANTHER PTHR30465 171 314 7.0E-149 T 23-04-2016 VV93_RS06660 7f457103f3da138b94c4e984130643b0 320 PANTHER PTHR30465 1 146 7.0E-149 T 23-04-2016 VV93_RS01760 52ea83b0c841680237bc7b38fbc9f054 650 SUPERFAMILY SSF51735 145 270 2.87E-16 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01760 52ea83b0c841680237bc7b38fbc9f054 650 Gene3D G3DSA:3.40.50.720 282 475 9.5E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01760 52ea83b0c841680237bc7b38fbc9f054 650 PANTHER PTHR10366 282 564 1.1E-122 T 23-04-2016 VV93_RS01760 52ea83b0c841680237bc7b38fbc9f054 650 Pfam PF13727 CoA-binding domain 69 238 2.1E-11 T 23-04-2016 VV93_RS01760 52ea83b0c841680237bc7b38fbc9f054 650 Pfam PF02719 Polysaccharide biosynthesis protein 283 580 2.1E-129 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VV93_RS01760 52ea83b0c841680237bc7b38fbc9f054 650 SUPERFAMILY SSF51735 280 559 5.72E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01760 52ea83b0c841680237bc7b38fbc9f054 650 Gene3D G3DSA:3.40.50.720 144 233 1.7E-12 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01760 52ea83b0c841680237bc7b38fbc9f054 650 Gene3D G3DSA:3.90.25.10 476 557 2.4E-8 T 23-04-2016 VV93_RS01760 52ea83b0c841680237bc7b38fbc9f054 650 PANTHER PTHR10366:SF256 282 564 1.1E-122 T 23-04-2016 VV93_RS09155 8a2f253fd74cea7141f50ae89a3826d6 337 SUPERFAMILY SSF52540 129 313 2.39E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09155 8a2f253fd74cea7141f50ae89a3826d6 337 Gene3D G3DSA:3.40.50.300 133 313 5.3E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09155 8a2f253fd74cea7141f50ae89a3826d6 337 Pfam PF13807 G-rich domain on putative tyrosine kinase 3 65 3.6E-7 T 23-04-2016 IPR032807 Tyrosine kinase, G-rich domain VV93_RS09155 8a2f253fd74cea7141f50ae89a3826d6 337 PANTHER PTHR32309 1 334 1.7E-25 T 23-04-2016 VV93_RS20270 784dc9f3f511c371c23912825be4de8c 69 Pfam PF16130 Domain of unknown function (DUF4842) 2 69 1.1E-6 T 23-04-2016 IPR032295 Domain of unknown function DUF4842 VV93_RS02505 563c5cc113bb4ec072a91a47be607962 149 PANTHER PTHR38978 1 141 1.4E-58 T 23-04-2016 VV93_RS02505 563c5cc113bb4ec072a91a47be607962 149 PANTHER PTHR38978:SF1 1 141 1.4E-58 T 23-04-2016 VV93_RS02505 563c5cc113bb4ec072a91a47be607962 149 Pfam PF10980 Protein of unknown function (DUF2787) 15 138 9.3E-33 T 23-04-2016 IPR021248 Protein of unknown function DUF2787 VV93_RS15075 130d4702028ea1444d7089bb2235a3e0 315 PANTHER PTHR11138 2 305 4.6E-118 T 23-04-2016 VV93_RS15075 130d4702028ea1444d7089bb2235a3e0 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 23-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV93_RS15075 130d4702028ea1444d7089bb2235a3e0 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 2.0E-28 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV93_RS15075 130d4702028ea1444d7089bb2235a3e0 315 Pfam PF00551 Formyl transferase 6 183 1.4E-47 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV93_RS15075 130d4702028ea1444d7089bb2235a3e0 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 2.1E-106 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV93_RS15075 130d4702028ea1444d7089bb2235a3e0 315 SUPERFAMILY SSF50486 208 310 2.98E-32 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 VV93_RS15075 130d4702028ea1444d7089bb2235a3e0 315 SUPERFAMILY SSF53328 3 207 1.44E-67 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV93_RS15075 130d4702028ea1444d7089bb2235a3e0 315 Gene3D G3DSA:3.40.50.170 4 208 1.7E-74 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV93_RS15075 130d4702028ea1444d7089bb2235a3e0 315 Gene3D G3DSA:3.10.25.10 210 307 4.0E-34 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV93_RS15075 130d4702028ea1444d7089bb2235a3e0 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 36.76 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV93_RS03550 59721eadca356bba21e5439d1ec0952a 155 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 117 6.3E-40 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type VV93_RS03550 59721eadca356bba21e5439d1ec0952a 155 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 155 46.699 T 23-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 VV93_RS03550 59721eadca356bba21e5439d1ec0952a 155 Pfam PF02082 Transcriptional regulator 1 70 7.0E-21 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type VV93_RS03550 59721eadca356bba21e5439d1ec0952a 155 SUPERFAMILY SSF46785 1 120 9.1E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS03550 59721eadca356bba21e5439d1ec0952a 155 Gene3D G3DSA:1.10.10.10 2 121 2.0E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS03550 59721eadca356bba21e5439d1ec0952a 155 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 36 54 - T 23-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site VV93_RS03550 59721eadca356bba21e5439d1ec0952a 155 PANTHER PTHR33221 1 139 2.2E-60 T 23-04-2016 VV93_RS03550 59721eadca356bba21e5439d1ec0952a 155 PANTHER PTHR33221:SF1 1 139 2.2E-60 T 23-04-2016 VV93_RS00445 036254f8bc61c0c945159a9e1c565c52 233 PANTHER PTHR38765 1 226 8.6E-71 T 23-04-2016 VV93_RS00445 036254f8bc61c0c945159a9e1c565c52 233 Pfam PF04340 Protein of unknown function, DUF484 6 216 1.9E-70 T 23-04-2016 IPR007435 Protein of unknown function DUF484 VV93_RS05485 63f4112602ee6427da5435c0e82ede25 279 Pfam PF11207 Protein of unknown function (DUF2989) 23 225 3.7E-74 T 23-04-2016 IPR021372 Protein of unknown function DUF2989 VV93_RS07550 834068af3ea2887d62c23d33b1a08605 388 Pfam PF12698 ABC-2 family transporter protein 15 369 1.2E-42 T 23-04-2016 VV93_RS07550 834068af3ea2887d62c23d33b1a08605 388 PANTHER PTHR30294:SF19 7 388 2.2E-113 T 23-04-2016 VV93_RS07550 834068af3ea2887d62c23d33b1a08605 388 PANTHER PTHR30294 7 388 2.2E-113 T 23-04-2016 VV93_RS07390 76f8a415dc11f3cc224acaa51f7a7852 476 ProSitePatterns PS00893 Nudix box signature. 63 84 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VV93_RS07390 76f8a415dc11f3cc224acaa51f7a7852 476 SUPERFAMILY SSF55811 35 167 8.39E-18 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS07390 76f8a415dc11f3cc224acaa51f7a7852 476 Gene3D G3DSA:1.20.144.10 174 358 2.5E-4 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VV93_RS07390 76f8a415dc11f3cc224acaa51f7a7852 476 SUPERFAMILY SSF48317 189 356 1.07E-6 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VV93_RS07390 76f8a415dc11f3cc224acaa51f7a7852 476 Pfam PF00293 NUDIX domain 37 155 5.0E-10 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VV93_RS07390 76f8a415dc11f3cc224acaa51f7a7852 476 Pfam PF01569 PAP2 superfamily 245 358 2.2E-7 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VV93_RS07390 76f8a415dc11f3cc224acaa51f7a7852 476 Gene3D G3DSA:3.90.79.10 36 148 7.3E-14 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS16635 daa53e8b289588012c0efb64f89897b8 177 PANTHER PTHR30606 1 177 7.6E-82 T 23-04-2016 VV93_RS16635 daa53e8b289588012c0efb64f89897b8 177 PANTHER PTHR30606:SF5 1 177 7.6E-82 T 23-04-2016 VV93_RS16635 daa53e8b289588012c0efb64f89897b8 177 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 1 174 8.1E-40 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VV93_RS04045 9156c985172a1bb387f0d9b59ac46ca2 149 PANTHER PTHR30455 2 149 8.4E-76 T 23-04-2016 VV93_RS04045 9156c985172a1bb387f0d9b59ac46ca2 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 5.1E-73 T 23-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VV93_RS04045 9156c985172a1bb387f0d9b59ac46ca2 149 PANTHER PTHR30455:SF2 2 149 8.4E-76 T 23-04-2016 VV93_RS04045 9156c985172a1bb387f0d9b59ac46ca2 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 89.763 T 23-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VV93_RS04045 9156c985172a1bb387f0d9b59ac46ca2 149 Pfam PF03477 ATP cone domain 50 136 2.2E-16 T 23-04-2016 IPR005144 ATP-cone domain VV93_RS05040 57df654fd34e048fc1bedee594a3afd0 323 Gene3D G3DSA:1.10.530.10 171 205 3.3E-5 T 23-04-2016 VV93_RS05040 57df654fd34e048fc1bedee594a3afd0 323 Gene3D G3DSA:1.10.530.10 112 126 3.3E-5 T 23-04-2016 VV93_RS05040 57df654fd34e048fc1bedee594a3afd0 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 23 322 1.4E-113 T 23-04-2016 IPR011970 Lytic murein transglycosylase VV93_RS05040 57df654fd34e048fc1bedee594a3afd0 323 Gene3D G3DSA:1.10.530.10 206 322 4.0E-60 T 23-04-2016 VV93_RS05040 57df654fd34e048fc1bedee594a3afd0 323 Gene3D G3DSA:1.10.530.10 67 111 4.0E-60 T 23-04-2016 VV93_RS05040 57df654fd34e048fc1bedee594a3afd0 323 SUPERFAMILY SSF53955 12 322 4.78E-100 T 23-04-2016 IPR023346 Lysozyme-like domain VV93_RS05040 57df654fd34e048fc1bedee594a3afd0 323 Pfam PF13406 Transglycosylase SLT domain 23 319 9.4E-111 T 23-04-2016 IPR031304 Transglycosylase SLT domain 2 VV93_RS05040 57df654fd34e048fc1bedee594a3afd0 323 PANTHER PTHR30163:SF2 4 322 9.9E-137 T 23-04-2016 VV93_RS05040 57df654fd34e048fc1bedee594a3afd0 323 PANTHER PTHR30163 4 322 9.9E-137 T 23-04-2016 IPR011757 Lytic transglycosylase MltB VV93_RS07770 f4557bf42c1c2d3ba9554c9a1e38006a 207 Gene3D G3DSA:1.10.1710.10 1 116 2.4E-36 T 23-04-2016 IPR016103 ProQ/FinO domain VV93_RS07770 f4557bf42c1c2d3ba9554c9a1e38006a 207 Hamap MF_00749 RNA chaperone ProQ [proQ]. 1 207 30.443 T 23-04-2016 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 VV93_RS07770 f4557bf42c1c2d3ba9554c9a1e38006a 207 SUPERFAMILY SSF48657 4 117 2.22E-39 T 23-04-2016 IPR016103 ProQ/FinO domain VV93_RS07770 f4557bf42c1c2d3ba9554c9a1e38006a 207 Pfam PF04352 ProQ/FINO family 6 113 1.3E-42 T 23-04-2016 IPR016103 ProQ/FinO domain VV93_RS07770 f4557bf42c1c2d3ba9554c9a1e38006a 207 PANTHER PTHR38106:SF1 1 207 2.7E-75 T 23-04-2016 VV93_RS07770 f4557bf42c1c2d3ba9554c9a1e38006a 207 SMART SM00945 3 117 3.2E-63 T 23-04-2016 IPR016103 ProQ/FinO domain VV93_RS07770 f4557bf42c1c2d3ba9554c9a1e38006a 207 PANTHER PTHR38106 1 207 2.7E-75 T 23-04-2016 VV93_RS04820 7653aea4e36a77de0c2c92bf7ef98ec5 165 Gene3D G3DSA:3.10.129.10 11 157 6.1E-35 T 23-04-2016 IPR029069 HotDog domain VV93_RS04820 7653aea4e36a77de0c2c92bf7ef98ec5 165 Pfam PF14539 Domain of unknown function (DUF4442) 15 151 1.7E-24 T 23-04-2016 IPR027961 Protein of unknown function DUF4442 VV93_RS04820 7653aea4e36a77de0c2c92bf7ef98ec5 165 SUPERFAMILY SSF54637 10 156 4.48E-24 T 23-04-2016 IPR029069 HotDog domain VV93_RS12660 51b2365e05601780ed57414dcd6b671a 596 SUPERFAMILY SSF51569 1 302 1.37E-90 T 23-04-2016 VV93_RS12660 51b2365e05601780ed57414dcd6b671a 596 Gene3D G3DSA:3.20.20.70 1 284 1.2E-116 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS12660 51b2365e05601780ed57414dcd6b671a 596 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 552 569 - T 23-04-2016 IPR001882 Biotin-binding site VV93_RS12660 51b2365e05601780ed57414dcd6b671a 596 PANTHER PTHR18866:SF109 9 589 8.9E-225 T 23-04-2016 VV93_RS12660 51b2365e05601780ed57414dcd6b671a 596 Gene3D G3DSA:2.40.50.100 524 595 6.9E-25 T 23-04-2016 VV93_RS12660 51b2365e05601780ed57414dcd6b671a 596 Pfam PF02436 Conserved carboxylase domain 294 493 1.6E-57 T 23-04-2016 IPR003379 Carboxylase, conserved domain VV93_RS12660 51b2365e05601780ed57414dcd6b671a 596 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 9 590 4.2E-267 T 23-04-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 VV93_RS12660 51b2365e05601780ed57414dcd6b671a 596 Pfam PF00682 HMGL-like 8 272 1.1E-59 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 VV93_RS12660 51b2365e05601780ed57414dcd6b671a 596 PANTHER PTHR18866 9 589 8.9E-225 T 23-04-2016 VV93_RS12660 51b2365e05601780ed57414dcd6b671a 596 SUPERFAMILY SSF89000 299 464 5.49E-50 T 23-04-2016 VV93_RS12660 51b2365e05601780ed57414dcd6b671a 596 Pfam PF00364 Biotin-requiring enzyme 530 594 9.3E-18 T 23-04-2016 IPR000089 Biotin/lipoyl attachment VV93_RS12660 51b2365e05601780ed57414dcd6b671a 596 SUPERFAMILY SSF51230 521 595 2.49E-21 T 23-04-2016 IPR011053 Single hybrid motif VV93_RS03460 efdfdec1cd87313d7180c67cecf565e7 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 5.8E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS03460 efdfdec1cd87313d7180c67cecf565e7 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 5.8E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS03460 efdfdec1cd87313d7180c67cecf565e7 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 5.8E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS03460 efdfdec1cd87313d7180c67cecf565e7 315 Gene3D G3DSA:1.10.10.10 7 89 2.3E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS03460 efdfdec1cd87313d7180c67cecf565e7 315 SUPERFAMILY SSF46785 7 89 3.1E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS03460 efdfdec1cd87313d7180c67cecf565e7 315 SUPERFAMILY SSF53850 93 298 1.05E-21 T 23-04-2016 VV93_RS03460 efdfdec1cd87313d7180c67cecf565e7 315 Pfam PF03466 LysR substrate binding domain 97 298 7.6E-13 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS03460 efdfdec1cd87313d7180c67cecf565e7 315 Gene3D G3DSA:3.40.190.10 93 212 6.0E-15 T 23-04-2016 VV93_RS03460 efdfdec1cd87313d7180c67cecf565e7 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 1.1E-14 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS03460 efdfdec1cd87313d7180c67cecf565e7 315 PANTHER PTHR30118 1 311 3.2E-45 T 23-04-2016 VV93_RS11825 5b78d1959ed83b21cff47fe9f1e6e1ea 483 Gene3D G3DSA:3.30.470.20 357 454 6.0E-5 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VV93_RS11825 5b78d1959ed83b21cff47fe9f1e6e1ea 483 Gene3D G3DSA:3.30.470.20 276 282 6.0E-5 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VV93_RS11825 5b78d1959ed83b21cff47fe9f1e6e1ea 483 Pfam PF08443 RimK-like ATP-grasp domain 277 455 8.1E-10 T 23-04-2016 IPR013651 ATP-grasp fold, RimK-type VV93_RS11825 5b78d1959ed83b21cff47fe9f1e6e1ea 483 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 167 4.3E-44 T 23-04-2016 IPR025839 RimK-like ATPgrasp N-terminal domain VV93_RS11825 5b78d1959ed83b21cff47fe9f1e6e1ea 483 Gene3D G3DSA:3.40.50.20 208 275 1.2E-8 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS11825 5b78d1959ed83b21cff47fe9f1e6e1ea 483 PANTHER PTHR11609:SF4 154 481 4.6E-143 T 23-04-2016 VV93_RS11825 5b78d1959ed83b21cff47fe9f1e6e1ea 483 SUPERFAMILY SSF56059 268 476 1.54E-40 T 23-04-2016 VV93_RS11825 5b78d1959ed83b21cff47fe9f1e6e1ea 483 PANTHER PTHR11609 154 481 4.6E-143 T 23-04-2016 VV93_RS11825 5b78d1959ed83b21cff47fe9f1e6e1ea 483 Gene3D G3DSA:3.30.1490.20 283 356 1.3E-11 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VV93_RS21430 37748685b2cd396374d4e6380caa08de 142 Pfam PF00873 AcrB/AcrD/AcrF family 2 124 2.2E-27 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS21430 37748685b2cd396374d4e6380caa08de 142 Gene3D G3DSA:1.10.3850.10 3 141 1.4E-37 T 23-04-2016 VV93_RS21430 37748685b2cd396374d4e6380caa08de 142 PANTHER PTHR32063 1 142 1.3E-71 T 23-04-2016 VV93_RS21430 37748685b2cd396374d4e6380caa08de 142 PANTHER PTHR32063:SF18 1 142 1.3E-71 T 23-04-2016 VV93_RS21430 37748685b2cd396374d4e6380caa08de 142 SUPERFAMILY SSF82866 7 141 1.1E-31 T 23-04-2016 VV93_RS06100 14e44cc673d98e6f69fc6fc07e3eb305 1036 Pfam PF10150 Ribonuclease E/G family 121 390 3.4E-95 T 23-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VV93_RS06100 14e44cc673d98e6f69fc6fc07e3eb305 1036 PANTHER PTHR30001 1 830 0.0 T 23-04-2016 VV93_RS06100 14e44cc673d98e6f69fc6fc07e3eb305 1036 SMART SM00316 37 119 2.1E-10 T 23-04-2016 IPR022967 RNA-binding domain, S1 VV93_RS06100 14e44cc673d98e6f69fc6fc07e3eb305 1036 Pfam PF00575 S1 RNA binding domain 37 118 1.3E-13 T 23-04-2016 IPR003029 S1 domain GO:0003676 VV93_RS06100 14e44cc673d98e6f69fc6fc07e3eb305 1036 Hamap MF_00970 Ribonuclease E [rne]. 1 1023 35.526 T 23-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 VV93_RS06100 14e44cc673d98e6f69fc6fc07e3eb305 1036 SUPERFAMILY SSF50249 40 124 1.26E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS06100 14e44cc673d98e6f69fc6fc07e3eb305 1036 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 6.7E-171 T 23-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VV93_RS06100 14e44cc673d98e6f69fc6fc07e3eb305 1036 PANTHER PTHR30001:SF1 1 830 0.0 T 23-04-2016 VV93_RS06100 14e44cc673d98e6f69fc6fc07e3eb305 1036 Gene3D G3DSA:2.40.50.140 31 124 6.7E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS05980 9795ab53138a60c20324b9f14f413c8f 92 SUPERFAMILY SSF54292 4 85 9.7E-20 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VV93_RS05980 9795ab53138a60c20324b9f14f413c8f 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 74 4.4E-9 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VV93_RS05980 9795ab53138a60c20324b9f14f413c8f 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VV93_RS05980 9795ab53138a60c20324b9f14f413c8f 92 Gene3D G3DSA:3.10.20.30 10 83 5.2E-19 T 23-04-2016 IPR012675 Beta-grasp domain VV93_RS03975 e25d1e0ca2bf433ee1caf5920ba44efd 181 PANTHER PTHR11079:SF72 12 159 5.5E-50 T 23-04-2016 VV93_RS03975 e25d1e0ca2bf433ee1caf5920ba44efd 181 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 16 157 44.469 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 VV93_RS03975 e25d1e0ca2bf433ee1caf5920ba44efd 181 PANTHER PTHR11079 12 159 5.5E-50 T 23-04-2016 VV93_RS03975 e25d1e0ca2bf433ee1caf5920ba44efd 181 SUPERFAMILY SSF53927 9 161 3.35E-55 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VV93_RS03975 e25d1e0ca2bf433ee1caf5920ba44efd 181 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 98 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VV93_RS03975 e25d1e0ca2bf433ee1caf5920ba44efd 181 Pfam PF14437 MafB19-like deaminase 12 157 4.2E-31 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 VV93_RS03975 e25d1e0ca2bf433ee1caf5920ba44efd 181 Gene3D G3DSA:3.40.140.10 8 155 5.1E-58 T 23-04-2016 VV93_RS06915 4bcc7ccefffcc162671a7ebd234332b7 87 Gene3D G3DSA:3.40.30.10 2 81 2.7E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS06915 4bcc7ccefffcc162671a7ebd234332b7 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 5.3E-47 T 23-04-2016 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 VV93_RS06915 4bcc7ccefffcc162671a7ebd234332b7 87 PRINTS PR00160 Glutaredoxin signature 3 21 5.2E-12 T 23-04-2016 IPR014025 Glutaredoxin subgroup VV93_RS06915 4bcc7ccefffcc162671a7ebd234332b7 87 PRINTS PR00160 Glutaredoxin signature 52 65 5.2E-12 T 23-04-2016 IPR014025 Glutaredoxin subgroup VV93_RS06915 4bcc7ccefffcc162671a7ebd234332b7 87 PRINTS PR00160 Glutaredoxin signature 66 79 5.2E-12 T 23-04-2016 IPR014025 Glutaredoxin subgroup VV93_RS06915 4bcc7ccefffcc162671a7ebd234332b7 87 Pfam PF00462 Glutaredoxin 3 69 3.7E-16 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VV93_RS06915 4bcc7ccefffcc162671a7ebd234332b7 87 PANTHER PTHR10168 1 81 6.1E-42 T 23-04-2016 VV93_RS06915 4bcc7ccefffcc162671a7ebd234332b7 87 SUPERFAMILY SSF52833 3 81 3.94E-21 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS06915 4bcc7ccefffcc162671a7ebd234332b7 87 PANTHER PTHR10168:SF85 1 81 6.1E-42 T 23-04-2016 VV93_RS02535 21d71f4209c63428d2e9a3e3dae5faa4 329 PANTHER PTHR10903:SF67 12 164 6.3E-35 T 23-04-2016 VV93_RS02535 21d71f4209c63428d2e9a3e3dae5faa4 329 PANTHER PTHR10903 12 164 6.3E-35 T 23-04-2016 VV93_RS02535 21d71f4209c63428d2e9a3e3dae5faa4 329 Pfam PF01926 50S ribosome-binding GTPase 42 137 2.0E-8 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 VV93_RS02535 21d71f4209c63428d2e9a3e3dae5faa4 329 Gene3D G3DSA:3.40.50.300 26 257 1.0E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02535 21d71f4209c63428d2e9a3e3dae5faa4 329 SUPERFAMILY SSF52540 26 174 5.16E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10115 706f66f56ab9d6c22606938485fb20be 288 Pfam PF01904 Protein of unknown function DUF72 23 262 1.7E-53 T 23-04-2016 IPR002763 Protein of unknown function DUF72 VV93_RS10115 706f66f56ab9d6c22606938485fb20be 288 PANTHER PTHR30348 6 288 2.1E-77 T 23-04-2016 VV93_RS10115 706f66f56ab9d6c22606938485fb20be 288 PANTHER PTHR30348:SF3 6 288 2.1E-77 T 23-04-2016 VV93_RS10115 706f66f56ab9d6c22606938485fb20be 288 Gene3D G3DSA:3.20.20.410 3 272 4.4E-72 T 23-04-2016 IPR002763 Protein of unknown function DUF72 VV93_RS10115 706f66f56ab9d6c22606938485fb20be 288 SUPERFAMILY SSF117396 4 266 5.62E-72 T 23-04-2016 IPR002763 Protein of unknown function DUF72 VV93_RS07020 15a31ed1fcc66399de0a4e74481c5d00 245 PANTHER PTHR30336:SF0 14 218 2.9E-85 T 23-04-2016 VV93_RS07020 15a31ed1fcc66399de0a4e74481c5d00 245 PANTHER PTHR30336 14 218 2.9E-85 T 23-04-2016 VV93_RS07020 15a31ed1fcc66399de0a4e74481c5d00 245 Pfam PF02698 DUF218 domain 58 181 8.0E-22 T 23-04-2016 IPR003848 Domain of unknown function DUF218 VV93_RS07020 15a31ed1fcc66399de0a4e74481c5d00 245 Gene3D G3DSA:3.40.50.620 52 179 2.7E-10 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS09665 70087d7fbb3e3a880e6ca5a889a17c0a 768 Gene3D G3DSA:3.80.30.20 365 611 1.0E-47 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VV93_RS09665 70087d7fbb3e3a880e6ca5a889a17c0a 768 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 VV93_RS09665 70087d7fbb3e3a880e6ca5a889a17c0a 768 SMART SM00729 367 617 9.5E-5 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VV93_RS09665 70087d7fbb3e3a880e6ca5a889a17c0a 768 SUPERFAMILY SSF102114 370 431 2.22E-11 T 23-04-2016 VV93_RS09665 70087d7fbb3e3a880e6ca5a889a17c0a 768 SUPERFAMILY SSF102114 461 605 2.22E-11 T 23-04-2016 VV93_RS09665 70087d7fbb3e3a880e6ca5a889a17c0a 768 Pfam PF11842 Domain of unknown function (DUF3362) 585 728 2.3E-42 T 23-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal VV93_RS09665 70087d7fbb3e3a880e6ca5a889a17c0a 768 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 23 686 48.132 T 23-04-2016 IPR022946 Uncharacterised protein family UPF0313 VV93_RS09665 70087d7fbb3e3a880e6ca5a889a17c0a 768 PANTHER PTHR32331:SF3 3 716 0.0 T 23-04-2016 VV93_RS09665 70087d7fbb3e3a880e6ca5a889a17c0a 768 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 9.4E-263 T 23-04-2016 IPR022946 Uncharacterised protein family UPF0313 VV93_RS09665 70087d7fbb3e3a880e6ca5a889a17c0a 768 Pfam PF08497 Radical SAM N-terminal 24 370 1.1E-143 T 23-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal VV93_RS09665 70087d7fbb3e3a880e6ca5a889a17c0a 768 PANTHER PTHR32331 3 716 0.0 T 23-04-2016 VV93_RS09665 70087d7fbb3e3a880e6ca5a889a17c0a 768 Pfam PF04055 Radical SAM superfamily 371 576 3.9E-20 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VV93_RS12650 90c366577612ca1c992968851f457463 316 PANTHER PTHR11695:SF294 17 315 8.0E-79 T 23-04-2016 VV93_RS12650 90c366577612ca1c992968851f457463 316 Gene3D G3DSA:3.90.180.10 2 153 3.5E-40 T 23-04-2016 IPR011032 GroES-like VV93_RS12650 90c366577612ca1c992968851f457463 316 Gene3D G3DSA:3.40.50.720 154 240 8.8E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS12650 90c366577612ca1c992968851f457463 316 SUPERFAMILY SSF50129 4 154 1.0E-34 T 23-04-2016 IPR011032 GroES-like VV93_RS12650 90c366577612ca1c992968851f457463 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 92 6.2E-7 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VV93_RS12650 90c366577612ca1c992968851f457463 316 PANTHER PTHR11695 17 315 8.0E-79 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 VV93_RS12650 90c366577612ca1c992968851f457463 316 SMART SM00829 12 312 2.3E-14 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VV93_RS12650 90c366577612ca1c992968851f457463 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 8.0E-20 T 23-04-2016 VV93_RS12650 90c366577612ca1c992968851f457463 316 SUPERFAMILY SSF51735 122 246 5.22E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS13890 36bfef94981fc847ecfa48809c4c866f 803 PIRSF PIRSF000727 5 803 5.1E-299 T 23-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 VV93_RS13890 36bfef94981fc847ecfa48809c4c866f 803 Pfam PF00696 Amino acid kinase family 5 272 3.4E-42 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS13890 36bfef94981fc847ecfa48809c4c866f 803 SUPERFAMILY SSF51735 448 623 1.11E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS13890 36bfef94981fc847ecfa48809c4c866f 803 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS13890 36bfef94981fc847ecfa48809c4c866f 803 SUPERFAMILY SSF55347 601 784 5.23E-45 T 23-04-2016 VV93_RS13890 36bfef94981fc847ecfa48809c4c866f 803 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 4.6E-64 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS13890 36bfef94981fc847ecfa48809c4c866f 803 PANTHER PTHR21499:SF29 378 800 8.9E-203 T 23-04-2016 VV93_RS13890 36bfef94981fc847ecfa48809c4c866f 803 Gene3D G3DSA:3.40.1160.10 92 291 2.5E-45 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS13890 36bfef94981fc847ecfa48809c4c866f 803 Gene3D G3DSA:3.40.1160.10 5 52 2.5E-45 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS13890 36bfef94981fc847ecfa48809c4c866f 803 PANTHER PTHR21499 378 800 8.9E-203 T 23-04-2016 VV93_RS13890 36bfef94981fc847ecfa48809c4c866f 803 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 593 4.4E-15 T 23-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VV93_RS13890 36bfef94981fc847ecfa48809c4c866f 803 Gene3D G3DSA:3.30.360.10 623 779 1.3E-49 T 23-04-2016 VV93_RS13890 36bfef94981fc847ecfa48809c4c866f 803 Pfam PF00742 Homoserine dehydrogenase 601 796 9.7E-43 T 23-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS13890 36bfef94981fc847ecfa48809c4c866f 803 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 647 669 - T 23-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VV93_RS13890 36bfef94981fc847ecfa48809c4c866f 803 Gene3D G3DSA:3.40.50.720 448 622 9.2E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS13890 36bfef94981fc847ecfa48809c4c866f 803 SUPERFAMILY SSF53633 5 291 2.62E-57 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS11920 111d54909ee642b239af25231c7867c2 788 SUPERFAMILY SSF48208 275 535 1.6E-83 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 VV93_RS11920 111d54909ee642b239af25231c7867c2 788 SUPERFAMILY SSF48208 563 783 1.6E-83 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 VV93_RS11920 111d54909ee642b239af25231c7867c2 788 PANTHER PTHR23403 552 737 2.2E-32 T 23-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 VV93_RS11920 111d54909ee642b239af25231c7867c2 788 PANTHER PTHR23403 420 530 2.2E-32 T 23-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 VV93_RS11920 111d54909ee642b239af25231c7867c2 788 Pfam PF01204 Trehalase 419 766 4.7E-11 T 23-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 VV93_RS15175 d70d92bbe4e9ddde7d1b659ad2fb0454 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 23-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 VV93_RS15175 d70d92bbe4e9ddde7d1b659ad2fb0454 258 SMART SM00062 33 257 7.5E-37 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV93_RS15175 d70d92bbe4e9ddde7d1b659ad2fb0454 258 Gene3D G3DSA:3.40.190.10 123 207 6.6E-7 T 23-04-2016 VV93_RS15175 d70d92bbe4e9ddde7d1b659ad2fb0454 258 PANTHER PTHR18966 20 253 1.5E-30 T 23-04-2016 VV93_RS15175 d70d92bbe4e9ddde7d1b659ad2fb0454 258 Gene3D G3DSA:3.40.190.10 216 254 7.4E-28 T 23-04-2016 VV93_RS15175 d70d92bbe4e9ddde7d1b659ad2fb0454 258 Gene3D G3DSA:3.40.190.10 31 119 7.4E-28 T 23-04-2016 VV93_RS15175 d70d92bbe4e9ddde7d1b659ad2fb0454 258 SUPERFAMILY SSF53850 1 255 1.93E-50 T 23-04-2016 VV93_RS15175 d70d92bbe4e9ddde7d1b659ad2fb0454 258 PANTHER PTHR18966:SF243 20 253 1.5E-30 T 23-04-2016 VV93_RS15175 d70d92bbe4e9ddde7d1b659ad2fb0454 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 254 8.0E-38 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV93_RS11185 1bc35b704c2cb3e2deebab021ac09af9 218 Pfam PF00239 Resolvase, N terminal domain 2 144 8.0E-18 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VV93_RS11185 1bc35b704c2cb3e2deebab021ac09af9 218 SMART SM00857 1 146 2.2E-17 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VV93_RS11185 1bc35b704c2cb3e2deebab021ac09af9 218 SUPERFAMILY SSF53041 2 145 3.14E-15 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VV93_RS11185 1bc35b704c2cb3e2deebab021ac09af9 218 Gene3D G3DSA:3.40.50.1390 2 116 6.4E-12 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 PANTHER PTHR24322 155 187 2.2E-77 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 PANTHER PTHR24322 14 139 2.2E-77 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 245 3.2E-68 T 23-04-2016 VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 Gene3D G3DSA:3.40.50.720 5 247 6.7E-92 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.4E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.4E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.4E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 12 246 4.7E-101 T 23-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 PANTHER PTHR24322:SF635 155 187 2.2E-77 T 23-04-2016 VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 PANTHER PTHR24322:SF635 14 139 2.2E-77 T 23-04-2016 VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 219 6.2E-6 T 23-04-2016 VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 SUPERFAMILY SSF51735 9 247 8.2E-88 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.2E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.2E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.2E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.2E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.2E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS06140 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.2E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS11465 87875dc3a4b62581c2780da53759cbf8 185 PANTHER PTHR20982 1 185 5.8E-81 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 VV93_RS11465 87875dc3a4b62581c2780da53759cbf8 185 Pfam PF01765 Ribosome recycling factor 20 183 9.5E-63 T 23-04-2016 IPR023584 Ribosome recycling factor domain VV93_RS11465 87875dc3a4b62581c2780da53759cbf8 185 SUPERFAMILY SSF55194 2 184 2.35E-71 T 23-04-2016 IPR023584 Ribosome recycling factor domain VV93_RS11465 87875dc3a4b62581c2780da53759cbf8 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.615 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 VV93_RS11465 87875dc3a4b62581c2780da53759cbf8 185 Gene3D G3DSA:1.10.132.20 67 185 2.2E-45 T 23-04-2016 IPR023584 Ribosome recycling factor domain VV93_RS11465 87875dc3a4b62581c2780da53759cbf8 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 4.4E-76 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 VV93_RS01575 ed28a2b7960bd3c2ced3263dc95fa2a6 392 SUPERFAMILY SSF53756 6 376 2.2E-95 T 23-04-2016 VV93_RS01575 ed28a2b7960bd3c2ced3263dc95fa2a6 392 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 6 372 9.7E-147 T 23-04-2016 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 VV93_RS01575 ed28a2b7960bd3c2ced3263dc95fa2a6 392 Gene3D G3DSA:3.40.50.2000 212 374 4.2E-13 T 23-04-2016 VV93_RS01575 ed28a2b7960bd3c2ced3263dc95fa2a6 392 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 373 9.7E-93 T 23-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain VV93_RS01575 ed28a2b7960bd3c2ced3263dc95fa2a6 392 Gene3D G3DSA:3.40.50.2000 3 211 1.8E-49 T 23-04-2016 VV93_RS11535 ba1fdff7942c1b5e20f8a248efa91304 147 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 1.3E-47 T 23-04-2016 IPR003791 Protein of unknown function UPF0178 VV93_RS11535 ba1fdff7942c1b5e20f8a248efa91304 147 PANTHER PTHR35146:SF1 1 147 8.7E-54 T 23-04-2016 VV93_RS11535 ba1fdff7942c1b5e20f8a248efa91304 147 PANTHER PTHR35146 1 147 8.7E-54 T 23-04-2016 VV93_RS11535 ba1fdff7942c1b5e20f8a248efa91304 147 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 30.035 T 23-04-2016 IPR003791 Protein of unknown function UPF0178 VV93_RS03990 af19242a50b4378bad0ae0bf3edd0bd5 101 Pfam PF12286 Protein of unknown function (DUF3622) 1 71 1.1E-35 T 23-04-2016 IPR022069 Protein of unknown function DUF3622 VV93_RS09925 79a38d16788b739ab0811d3f0e62f64d 132 Pfam PF00075 RNase H 16 118 1.0E-14 T 23-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VV93_RS09925 79a38d16788b739ab0811d3f0e62f64d 132 PANTHER PTHR10642 39 110 3.8E-13 T 23-04-2016 VV93_RS09925 79a38d16788b739ab0811d3f0e62f64d 132 SUPERFAMILY SSF53098 18 119 8.47E-20 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS09925 79a38d16788b739ab0811d3f0e62f64d 132 Gene3D G3DSA:3.30.420.10 18 118 9.1E-22 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS06675 b05843a5135654f783f49f9c0ada3a31 223 PANTHER PTHR31088:SF7 2 221 1.0E-112 T 23-04-2016 VV93_RS06675 b05843a5135654f783f49f9c0ada3a31 223 PANTHER PTHR31088 2 221 1.0E-112 T 23-04-2016 VV93_RS06675 b05843a5135654f783f49f9c0ada3a31 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 1.7E-95 T 23-04-2016 IPR014319 Phage shock protein, PspA VV93_RS06675 b05843a5135654f783f49f9c0ada3a31 223 Pfam PF04012 PspA/IM30 family 2 217 6.6E-61 T 23-04-2016 IPR007157 PspA/IM30 VV93_RS07110 0f91d58e2ae9047f08198cfe37a0ad86 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 31.559 T 23-04-2016 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 VV93_RS07110 0f91d58e2ae9047f08198cfe37a0ad86 331 PANTHER PTHR30472 1 331 4.2E-156 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VV93_RS07110 0f91d58e2ae9047f08198cfe37a0ad86 331 Gene3D G3DSA:1.10.3470.10 9 327 8.8E-96 T 23-04-2016 IPR029022 ABC transporter, BtuC-like VV93_RS07110 0f91d58e2ae9047f08198cfe37a0ad86 331 Pfam PF01032 FecCD transport family 20 326 4.7E-83 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VV93_RS07110 0f91d58e2ae9047f08198cfe37a0ad86 331 SUPERFAMILY SSF81345 7 326 9.68E-81 T 23-04-2016 IPR029022 ABC transporter, BtuC-like VV93_RS07110 0f91d58e2ae9047f08198cfe37a0ad86 331 PANTHER PTHR30472:SF29 1 331 4.2E-156 T 23-04-2016 VV93_RS01795 b67c847ad62a5c40d2c05037ccb34615 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.839 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VV93_RS01795 b67c847ad62a5c40d2c05037ccb34615 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.6E-35 T 23-04-2016 IPR027486 Ribosomal protein S10 domain VV93_RS01795 b67c847ad62a5c40d2c05037ccb34615 103 PANTHER PTHR11700 1 102 1.2E-54 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VV93_RS01795 b67c847ad62a5c40d2c05037ccb34615 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VV93_RS01795 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.33E-18 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VV93_RS01795 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.33E-18 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VV93_RS01795 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.33E-18 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VV93_RS01795 b67c847ad62a5c40d2c05037ccb34615 103 SUPERFAMILY SSF54999 5 101 7.06E-37 T 23-04-2016 IPR027486 Ribosomal protein S10 domain VV93_RS01795 b67c847ad62a5c40d2c05037ccb34615 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 23-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01795 b67c847ad62a5c40d2c05037ccb34615 103 Gene3D G3DSA:3.30.70.600 3 102 1.1E-43 T 23-04-2016 IPR027486 Ribosomal protein S10 domain VV93_RS01795 b67c847ad62a5c40d2c05037ccb34615 103 SMART SM01403 7 101 6.6E-56 T 23-04-2016 IPR027486 Ribosomal protein S10 domain VV93_RS04860 c6e8e6e626b1fc7ac117ebfd9f00364e 468 PANTHER PTHR11958 1 458 8.2E-150 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS04860 c6e8e6e626b1fc7ac117ebfd9f00364e 468 Pfam PF00375 Sodium:dicarboxylate symporter family 31 444 2.6E-89 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS04860 c6e8e6e626b1fc7ac117ebfd9f00364e 468 PANTHER PTHR11958:SF5 1 458 8.2E-150 T 23-04-2016 VV93_RS04860 c6e8e6e626b1fc7ac117ebfd9f00364e 468 Gene3D G3DSA:1.10.3860.10 24 447 1.9E-77 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS04860 c6e8e6e626b1fc7ac117ebfd9f00364e 468 SUPERFAMILY SSF118215 30 444 2.09E-82 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS04860 c6e8e6e626b1fc7ac117ebfd9f00364e 468 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 2.5E-14 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS04860 c6e8e6e626b1fc7ac117ebfd9f00364e 468 PRINTS PR00173 Glutamate-aspartate symporter signature 372 391 2.5E-14 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS04860 c6e8e6e626b1fc7ac117ebfd9f00364e 468 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 2.5E-14 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS04860 c6e8e6e626b1fc7ac117ebfd9f00364e 468 PRINTS PR00173 Glutamate-aspartate symporter signature 185 207 2.5E-14 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS04860 c6e8e6e626b1fc7ac117ebfd9f00364e 468 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 2.5E-14 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS04860 c6e8e6e626b1fc7ac117ebfd9f00364e 468 PRINTS PR00173 Glutamate-aspartate symporter signature 399 419 2.5E-14 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS07190 6606ca60ff24967290dfa4eabc27d794 339 PANTHER PTHR11820 11 268 1.2E-140 T 23-04-2016 VV93_RS07190 6606ca60ff24967290dfa4eabc27d794 339 PANTHER PTHR11820 284 337 1.2E-140 T 23-04-2016 VV93_RS07190 6606ca60ff24967290dfa4eabc27d794 339 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 333 1.5E-40 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VV93_RS07190 6606ca60ff24967290dfa4eabc27d794 339 Gene3D G3DSA:3.90.850.10 306 317 2.8E-39 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VV93_RS07190 6606ca60ff24967290dfa4eabc27d794 339 Gene3D G3DSA:3.90.850.10 67 270 2.8E-39 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VV93_RS07190 6606ca60ff24967290dfa4eabc27d794 339 PANTHER PTHR11820:SF85 11 268 1.2E-140 T 23-04-2016 VV93_RS07190 6606ca60ff24967290dfa4eabc27d794 339 PANTHER PTHR11820:SF85 284 337 1.2E-140 T 23-04-2016 VV93_RS07190 6606ca60ff24967290dfa4eabc27d794 339 SUPERFAMILY SSF56529 77 333 4.06E-56 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VV93_RS01195 079e3370009e99244106bb483f980647 210 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 132 209 2.1E-11 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 VV93_RS01195 079e3370009e99244106bb483f980647 210 Gene3D G3DSA:3.30.1150.10 131 208 1.0E-5 T 23-04-2016 VV93_RS01195 079e3370009e99244106bb483f980647 210 SUPERFAMILY SSF74653 121 207 1.01E-17 T 23-04-2016 VV93_RS01195 079e3370009e99244106bb483f980647 210 PANTHER PTHR33446:SF1 47 210 1.9E-16 T 23-04-2016 VV93_RS01195 079e3370009e99244106bb483f980647 210 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 130 208 5.4E-15 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 VV93_RS01195 079e3370009e99244106bb483f980647 210 PANTHER PTHR33446 47 210 1.9E-16 T 23-04-2016 VV93_RS12515 b7a2ac14d2fbba49cfc52206027d0e54 176 Pfam PF00156 Phosphoribosyl transferase domain 14 159 4.4E-26 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VV93_RS12515 b7a2ac14d2fbba49cfc52206027d0e54 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 2.2E-72 T 23-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 VV93_RS12515 b7a2ac14d2fbba49cfc52206027d0e54 176 PANTHER PTHR22573:SF56 1 170 3.5E-78 T 23-04-2016 VV93_RS12515 b7a2ac14d2fbba49cfc52206027d0e54 176 Gene3D G3DSA:3.40.50.2020 2 175 3.3E-78 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like VV93_RS12515 b7a2ac14d2fbba49cfc52206027d0e54 176 PANTHER PTHR22573 1 170 3.5E-78 T 23-04-2016 VV93_RS12515 b7a2ac14d2fbba49cfc52206027d0e54 176 SUPERFAMILY SSF53271 3 175 1.31E-54 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like VV93_RS01445 3e341408c05b17753b21507e4deeec5d 401 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 8.8E-152 T 23-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 VV93_RS01445 3e341408c05b17753b21507e4deeec5d 401 Pfam PF02441 Flavoprotein 7 135 9.3E-33 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 VV93_RS01445 3e341408c05b17753b21507e4deeec5d 401 PANTHER PTHR14359:SF20 2 399 2.3E-199 T 23-04-2016 VV93_RS01445 3e341408c05b17753b21507e4deeec5d 401 Gene3D G3DSA:3.40.50.1950 2 185 1.2E-66 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 VV93_RS01445 3e341408c05b17753b21507e4deeec5d 401 PANTHER PTHR14359 2 399 2.3E-199 T 23-04-2016 VV93_RS01445 3e341408c05b17753b21507e4deeec5d 401 SUPERFAMILY SSF102645 184 399 4.84E-81 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 VV93_RS01445 3e341408c05b17753b21507e4deeec5d 401 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 370 9.3E-77 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 VV93_RS01445 3e341408c05b17753b21507e4deeec5d 401 SUPERFAMILY SSF52507 1 182 1.27E-61 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 VV93_RS01445 3e341408c05b17753b21507e4deeec5d 401 Gene3D G3DSA:3.40.50.10300 186 399 5.4E-90 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 VV93_RS04025 528b61449e07f766747037abeec2b4f8 415 Gene3D G3DSA:3.40.50.1820 347 388 1.7E-20 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS04025 528b61449e07f766747037abeec2b4f8 415 Gene3D G3DSA:3.40.50.1820 159 300 1.7E-20 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS04025 528b61449e07f766747037abeec2b4f8 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 414 8.7E-234 T 23-04-2016 IPR010520 UPF0255 family VV93_RS04025 528b61449e07f766747037abeec2b4f8 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 59.132 T 23-04-2016 IPR010520 UPF0255 family VV93_RS04025 528b61449e07f766747037abeec2b4f8 415 SUPERFAMILY SSF53474 46 410 2.37E-46 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS11775 f73f735e086a51194b4a51b781e391b5 104 Gene3D G3DSA:1.10.10.710 20 85 9.6E-25 T 23-04-2016 IPR009813 Uncharacterised protein family YebG VV93_RS11775 f73f735e086a51194b4a51b781e391b5 104 Pfam PF07130 YebG protein 1 72 2.0E-31 T 23-04-2016 IPR009813 Uncharacterised protein family YebG VV93_RS08175 625b79f9cb02b1c839edc552efe137c0 272 Pfam PF12849 PBP superfamily domain 31 247 9.9E-30 T 23-04-2016 IPR024370 PBP domain VV93_RS08175 625b79f9cb02b1c839edc552efe137c0 272 PANTHER PTHR37945 18 272 1.5E-112 T 23-04-2016 VV93_RS08175 625b79f9cb02b1c839edc552efe137c0 272 Gene3D G3DSA:3.40.190.10 189 271 3.7E-27 T 23-04-2016 VV93_RS08175 625b79f9cb02b1c839edc552efe137c0 272 SUPERFAMILY SSF53850 29 257 1.24E-30 T 23-04-2016 VV93_RS08175 625b79f9cb02b1c839edc552efe137c0 272 Gene3D G3DSA:3.40.190.10 11 154 4.6E-44 T 23-04-2016 VV93_RS11260 41a6964a829743ee31a302191edd941f 80 Gene3D G3DSA:3.30.110.40 3 67 1.7E-11 T 23-04-2016 IPR001455 TusA-like domain VV93_RS11260 41a6964a829743ee31a302191edd941f 80 Pfam PF01206 Sulfurtransferase TusA 4 70 5.5E-13 T 23-04-2016 IPR001455 TusA-like domain VV93_RS11260 41a6964a829743ee31a302191edd941f 80 SUPERFAMILY SSF64307 4 74 6.02E-14 T 23-04-2016 IPR001455 TusA-like domain VV93_RS13040 345b1d38449b8b0ce983407a797cbd99 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 5.8E-127 T 23-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 VV93_RS13040 345b1d38449b8b0ce983407a797cbd99 368 Gene3D G3DSA:3.40.50.300 100 342 6.0E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13040 345b1d38449b8b0ce983407a797cbd99 368 SUPERFAMILY SSF52540 3 334 2.3E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13040 345b1d38449b8b0ce983407a797cbd99 368 PANTHER PTHR30486:SF3 1 368 5.9E-161 T 23-04-2016 VV93_RS13040 345b1d38449b8b0ce983407a797cbd99 368 PANTHER PTHR30486 1 368 5.9E-161 T 23-04-2016 VV93_RS13040 345b1d38449b8b0ce983407a797cbd99 368 Pfam PF00437 Type II/IV secretion system protein 116 251 6.8E-37 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VV93_RS10185 9bdeab6559756330b0e6498f7329546a 263 PANTHER PTHR10108:SF919 3 205 8.9E-27 T 23-04-2016 VV93_RS10185 9bdeab6559756330b0e6498f7329546a 263 Pfam PF13847 Methyltransferase domain 47 154 9.8E-12 T 23-04-2016 IPR025714 Methyltransferase domain VV93_RS10185 9bdeab6559756330b0e6498f7329546a 263 PANTHER PTHR10108 3 205 8.9E-27 T 23-04-2016 VV93_RS10185 9bdeab6559756330b0e6498f7329546a 263 Gene3D G3DSA:3.40.50.150 42 259 1.0E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS10185 9bdeab6559756330b0e6498f7329546a 263 SUPERFAMILY SSF53335 6 251 4.8E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00780 c91480c6f85c911ecaae340b171ba1c1 131 PANTHER PTHR10374:SF8 3 129 5.3E-29 T 23-04-2016 VV93_RS00780 c91480c6f85c911ecaae340b171ba1c1 131 SUPERFAMILY SSF54593 3 126 6.05E-28 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS00780 c91480c6f85c911ecaae340b171ba1c1 131 PANTHER PTHR10374 3 129 5.3E-29 T 23-04-2016 VV93_RS00780 c91480c6f85c911ecaae340b171ba1c1 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 1.3E-15 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV93_RS00780 c91480c6f85c911ecaae340b171ba1c1 131 Gene3D G3DSA:3.10.180.10 3 127 2.0E-32 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS04015 816d851ac4f31aeca5f11de72f8cbaee 429 PIRSF PIRSF005353 1 429 1.4E-189 T 23-04-2016 IPR026033 Purine permease PbuG-like VV93_RS04015 816d851ac4f31aeca5f11de72f8cbaee 429 Pfam PF00860 Permease family 17 391 8.6E-56 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VV93_RS04015 816d851ac4f31aeca5f11de72f8cbaee 429 PANTHER PTHR11119:SF9 1 418 5.4E-173 T 23-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 VV93_RS04015 816d851ac4f31aeca5f11de72f8cbaee 429 PANTHER PTHR11119 1 418 5.4E-173 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VV93_RS00180 7a4f833744ffbcc11ef2968fe01389c3 83 Pfam PF04380 Membrane fusogenic activity 1 78 9.7E-28 T 23-04-2016 IPR007475 Membrane fusogenic activity VV93_RS00180 7a4f833744ffbcc11ef2968fe01389c3 83 PANTHER PTHR38040 2 82 4.2E-37 T 23-04-2016 VV93_RS00180 7a4f833744ffbcc11ef2968fe01389c3 83 PANTHER PTHR38040:SF1 2 82 4.2E-37 T 23-04-2016 VV93_RS00630 44072073430c2a777c7fc25e1fc1da6f 132 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 18 123 2.0E-55 T 23-04-2016 IPR009867 Protein of unknown function DUF1422 VV93_RS00630 44072073430c2a777c7fc25e1fc1da6f 132 Pfam PF07226 Protein of unknown function (DUF1422) 17 126 2.3E-47 T 23-04-2016 IPR009867 Protein of unknown function DUF1422 VV93_RS07270 5c3a095205b76df9f7ac2c93f7ea1514 434 PANTHER PTHR30061:SF7 1 431 4.5E-147 T 23-04-2016 VV93_RS07270 5c3a095205b76df9f7ac2c93f7ea1514 434 SUPERFAMILY SSF53850 26 421 6.52E-69 T 23-04-2016 VV93_RS07270 5c3a095205b76df9f7ac2c93f7ea1514 434 PANTHER PTHR30061 1 431 4.5E-147 T 23-04-2016 VV93_RS07270 5c3a095205b76df9f7ac2c93f7ea1514 434 Gene3D G3DSA:3.40.190.10 146 353 1.6E-35 T 23-04-2016 VV93_RS07270 5c3a095205b76df9f7ac2c93f7ea1514 434 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 141 158 - T 23-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 VV93_RS07270 5c3a095205b76df9f7ac2c93f7ea1514 434 Pfam PF13416 Bacterial extracellular solute-binding protein 45 367 2.0E-38 T 23-04-2016 VV93_RS10355 b9ba131deb99f4b8883650f36f9b0e10 246 PANTHER PTHR30133 3 246 3.9E-165 T 23-04-2016 VV93_RS10355 b9ba131deb99f4b8883650f36f9b0e10 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 3.6E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS10355 b9ba131deb99f4b8883650f36f9b0e10 246 Gene3D G3DSA:1.10.3720.10 8 78 2.0E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS10355 b9ba131deb99f4b8883650f36f9b0e10 246 Gene3D G3DSA:1.10.3720.10 110 241 2.0E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS10355 b9ba131deb99f4b8883650f36f9b0e10 246 SUPERFAMILY SSF161098 110 227 9.55E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS10355 b9ba131deb99f4b8883650f36f9b0e10 246 SUPERFAMILY SSF161098 11 78 9.55E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS10355 b9ba131deb99f4b8883650f36f9b0e10 246 PANTHER PTHR30133:SF3 3 246 3.9E-165 T 23-04-2016 VV93_RS10355 b9ba131deb99f4b8883650f36f9b0e10 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 74 1.7E-15 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VV93_RS04055 3549052b3ed2937797f977d8f42fbcb9 218 SUPERFAMILY SSF63380 1 89 6.38E-25 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VV93_RS04055 3549052b3ed2937797f977d8f42fbcb9 218 SUPERFAMILY SSF63380 93 195 8.25E-32 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VV93_RS04055 3549052b3ed2937797f977d8f42fbcb9 218 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 200 1.9E-66 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS04055 3549052b3ed2937797f977d8f42fbcb9 218 PIRSF PIRSF000498 1 212 6.1E-80 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS04055 3549052b3ed2937797f977d8f42fbcb9 218 Pfam PF00677 Lumazine binding domain 100 184 5.3E-21 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS04055 3549052b3ed2937797f977d8f42fbcb9 218 Pfam PF00677 Lumazine binding domain 3 87 1.9E-19 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS04055 3549052b3ed2937797f977d8f42fbcb9 218 PANTHER PTHR21098 1 218 1.4E-101 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS04055 3549052b3ed2937797f977d8f42fbcb9 218 Gene3D G3DSA:2.40.30.20 5 104 4.3E-30 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS04055 3549052b3ed2937797f977d8f42fbcb9 218 Gene3D G3DSA:2.40.30.20 105 194 1.3E-31 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VV93_RS21980 1467168ba15d6b30b653039eefa6c03a 64 Gene3D G3DSA:3.40.190.10 26 63 2.0E-4 T 23-04-2016 VV93_RS09515 66271d19eb322dfb8d80076fc0f019b5 362 PIRSF PIRSF039026 4 362 2.0E-141 T 23-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VV93_RS09515 66271d19eb322dfb8d80076fc0f019b5 362 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 327 5.9E-71 T 23-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 VV93_RS09515 66271d19eb322dfb8d80076fc0f019b5 362 PANTHER PTHR33376 5 347 2.6E-151 T 23-04-2016 VV93_RS09515 66271d19eb322dfb8d80076fc0f019b5 362 PANTHER PTHR33376:SF5 5 347 2.6E-151 T 23-04-2016 VV93_RS05280 ca0a087f0c5307714c8db3d97bd85693 100 Gene3D G3DSA:1.10.150.280 23 99 8.0E-19 T 23-04-2016 VV93_RS05280 ca0a087f0c5307714c8db3d97bd85693 100 PANTHER PTHR21180 39 98 4.7E-21 T 23-04-2016 VV93_RS05280 ca0a087f0c5307714c8db3d97bd85693 100 SUPERFAMILY SSF47781 34 98 2.22E-25 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VV93_RS05280 ca0a087f0c5307714c8db3d97bd85693 100 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 38 99 6.9E-27 T 23-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain VV93_RS05280 ca0a087f0c5307714c8db3d97bd85693 100 Pfam PF12836 Helix-hairpin-helix motif 38 98 2.3E-22 T 23-04-2016 VV93_RS06805 2f0b58b3e53f05f864f22b5548e180f2 437 Pfam PF07394 Protein of unknown function (DUF1501) 33 418 3.0E-71 T 23-04-2016 IPR010869 Protein of unknown function DUF1501 VV93_RS06805 2f0b58b3e53f05f864f22b5548e180f2 437 PANTHER PTHR15535:SF21 33 418 2.0E-43 T 23-04-2016 VV93_RS06805 2f0b58b3e53f05f864f22b5548e180f2 437 PANTHER PTHR15535 33 418 2.0E-43 T 23-04-2016 VV93_RS15335 83f3bcdcd54e1f36318b34b69d793b5a 63 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 9 60 2.8E-11 T 23-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) VV93_RS15335 83f3bcdcd54e1f36318b34b69d793b5a 63 SUPERFAMILY SSF46955 10 62 2.87E-10 T 23-04-2016 IPR009061 Putative DNA-binding domain VV93_RS15335 83f3bcdcd54e1f36318b34b69d793b5a 63 Gene3D G3DSA:1.10.10.10 10 61 3.9E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS15335 83f3bcdcd54e1f36318b34b69d793b5a 63 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 10 60 6.1E-8 T 23-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 VV93_RS03170 a83a569dbcfae7dba31f860c5584c37f 168 PANTHER PTHR33695:SF1 1 168 2.0E-55 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VV93_RS03170 a83a569dbcfae7dba31f860c5584c37f 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 16.785 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VV93_RS03170 a83a569dbcfae7dba31f860c5584c37f 168 PANTHER PTHR33695 1 168 2.0E-55 T 23-04-2016 VV93_RS03170 a83a569dbcfae7dba31f860c5584c37f 168 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VV93_RS03170 a83a569dbcfae7dba31f860c5584c37f 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 3.0E-18 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VV93_RS03170 a83a569dbcfae7dba31f860c5584c37f 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 3.0E-18 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VV93_RS03170 a83a569dbcfae7dba31f860c5584c37f 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 3.0E-18 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VV93_RS03170 a83a569dbcfae7dba31f860c5584c37f 168 Pfam PF01252 Signal peptidase (SPase) II 19 161 1.3E-36 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VV93_RS03170 a83a569dbcfae7dba31f860c5584c37f 168 TIGRFAM TIGR00077 lspA: signal peptidase II 6 167 8.1E-49 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VV93_RS10490 99e7284034dbbf1a9fa09160c50bd014 255 Pfam PF10972 Peptidoglycan-binding protein, CsiV 7 254 1.5E-70 T 23-04-2016 IPR021241 Peptidoglycan-binding protein, CsiV VV93_RS01325 f5360f62f59102dc5c4b3e334841e1b3 189 SUPERFAMILY SSF160930 18 159 7.45E-5 T 23-04-2016 VV93_RS05880 61310c0234bd3aa69a3636d5993f5edf 106 Gene3D G3DSA:3.10.450.140 6 105 4.0E-45 T 23-04-2016 IPR007376 dsDNA mimic, putative VV93_RS05880 61310c0234bd3aa69a3636d5993f5edf 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 3.6E-45 T 23-04-2016 IPR007376 dsDNA mimic, putative VV93_RS05880 61310c0234bd3aa69a3636d5993f5edf 106 SUPERFAMILY SSF102816 3 105 5.89E-48 T 23-04-2016 IPR007376 dsDNA mimic, putative VV93_RS05880 61310c0234bd3aa69a3636d5993f5edf 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 37.328 T 23-04-2016 IPR007376 dsDNA mimic, putative VV93_RS05880 61310c0234bd3aa69a3636d5993f5edf 106 PIRSF PIRSF004916 1 105 1.8E-51 T 23-04-2016 IPR007376 dsDNA mimic, putative VV93_RS05880 61310c0234bd3aa69a3636d5993f5edf 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 18 104 1.0E-44 T 23-04-2016 IPR007376 dsDNA mimic, putative VV93_RS09575 1422448c5127392b5bb05ea117088110 529 PANTHER PTHR10283 12 168 1.6E-275 T 23-04-2016 VV93_RS09575 1422448c5127392b5bb05ea117088110 529 PANTHER PTHR10283 198 518 1.6E-275 T 23-04-2016 VV93_RS09575 1422448c5127392b5bb05ea117088110 529 PANTHER PTHR10283:SF93 12 168 1.6E-275 T 23-04-2016 VV93_RS09575 1422448c5127392b5bb05ea117088110 529 PANTHER PTHR10283:SF93 198 518 1.6E-275 T 23-04-2016 VV93_RS09575 1422448c5127392b5bb05ea117088110 529 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 516 3.7E-300 T 23-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VV93_RS09575 1422448c5127392b5bb05ea117088110 529 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 0.0 T 23-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VV93_RS09575 1422448c5127392b5bb05ea117088110 529 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 529 381.052 T 23-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VV93_RS10460 6a8367e8c19653d65804121feda05b90 169 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 6.5E-46 T 23-04-2016 IPR018639 Domain of unknown function DUF2062 VV93_RS10460 6a8367e8c19653d65804121feda05b90 169 PANTHER PTHR40547 1 166 7.7E-51 T 23-04-2016 VV93_RS10460 6a8367e8c19653d65804121feda05b90 169 PANTHER PTHR40547:SF1 1 166 7.7E-51 T 23-04-2016 VV93_RS01910 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 PIRSF PIRSF002134 1 118 2.7E-41 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01910 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 23-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV93_RS01910 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.2E-53 T 23-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01910 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 PANTHER PTHR10871 1 118 3.7E-70 T 23-04-2016 VV93_RS01910 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 SUPERFAMILY SSF46946 2 114 6.62E-45 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VV93_RS01910 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.795 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01910 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 Gene3D G3DSA:1.10.8.50 1 71 1.6E-28 T 23-04-2016 VV93_RS01910 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 Gene3D G3DSA:4.10.910.10 72 118 3.5E-27 T 23-04-2016 IPR027437 30s ribosomal protein S13, C-terminal VV93_RS01910 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.9E-32 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS08795 5bdc9209433e26a4f3e4473f67088cd3 214 Pfam PF00857 Isochorismatase family 9 204 6.4E-22 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VV93_RS08795 5bdc9209433e26a4f3e4473f67088cd3 214 PANTHER PTHR11080 1 205 5.7E-15 T 23-04-2016 VV93_RS08795 5bdc9209433e26a4f3e4473f67088cd3 214 PANTHER PTHR11080:SF2 1 205 5.7E-15 T 23-04-2016 VV93_RS08795 5bdc9209433e26a4f3e4473f67088cd3 214 SUPERFAMILY SSF52499 4 205 8.24E-25 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VV93_RS08795 5bdc9209433e26a4f3e4473f67088cd3 214 Gene3D G3DSA:3.40.50.850 6 205 5.5E-30 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VV93_RS11855 15058af47548dfe6e0d7e239f29ef5ab 461 SUPERFAMILY SSF103473 10 425 1.83E-27 T 23-04-2016 IPR020846 Major facilitator superfamily domain VV93_RS11855 15058af47548dfe6e0d7e239f29ef5ab 461 Gene3D G3DSA:1.20.1250.20 10 199 1.3E-8 T 23-04-2016 VV93_RS11855 15058af47548dfe6e0d7e239f29ef5ab 461 Gene3D G3DSA:1.20.1250.20 228 428 1.3E-11 T 23-04-2016 VV93_RS11855 15058af47548dfe6e0d7e239f29ef5ab 461 PANTHER PTHR11328:SF35 1 446 2.2E-213 T 23-04-2016 VV93_RS11855 15058af47548dfe6e0d7e239f29ef5ab 461 PANTHER PTHR11328 1 446 2.2E-213 T 23-04-2016 VV93_RS11855 15058af47548dfe6e0d7e239f29ef5ab 461 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 18 442 1.5E-106 T 23-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 VV93_RS11855 15058af47548dfe6e0d7e239f29ef5ab 461 Pfam PF13347 MFS/sugar transport protein 19 430 1.7E-79 T 23-04-2016 VV93_RS05650 0684cd0649af93eb5826992141943d18 209 Pfam PF13743 Thioredoxin 6 175 6.7E-21 T 23-04-2016 VV93_RS05650 0684cd0649af93eb5826992141943d18 209 Gene3D G3DSA:1.10.472.60 52 161 2.3E-38 T 23-04-2016 IPR023169 UPF0413, central domain VV93_RS05650 0684cd0649af93eb5826992141943d18 209 SUPERFAMILY SSF52833 1 184 1.71E-36 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS05650 0684cd0649af93eb5826992141943d18 209 Gene3D G3DSA:3.40.30.10 162 180 1.3E-5 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS05650 0684cd0649af93eb5826992141943d18 209 Gene3D G3DSA:3.40.30.10 8 51 1.3E-5 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS22600 28d4730c505a270fb2cbdf27203ee916 173 SUPERFAMILY SSF53335 44 173 2.24E-12 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS22600 28d4730c505a270fb2cbdf27203ee916 173 PANTHER PTHR14911 4 173 1.9E-23 T 23-04-2016 VV93_RS22600 28d4730c505a270fb2cbdf27203ee916 173 PANTHER PTHR14911:SF13 4 173 1.9E-23 T 23-04-2016 VV93_RS22600 28d4730c505a270fb2cbdf27203ee916 173 Pfam PF02926 THUMP domain 7 127 4.3E-13 T 23-04-2016 IPR004114 THUMP domain GO:0003723 VV93_RS22600 28d4730c505a270fb2cbdf27203ee916 173 Pfam PF01170 Putative RNA methylase family UPF0020 136 173 4.8E-13 T 23-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS22600 28d4730c505a270fb2cbdf27203ee916 173 SMART SM00981 30 128 3.3E-20 T 23-04-2016 IPR004114 THUMP domain GO:0003723 VV93_RS22600 28d4730c505a270fb2cbdf27203ee916 173 Gene3D G3DSA:3.40.50.150 133 173 1.7E-5 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS10815 2d2cc416a4ad2bbf55744bb3d5c85a91 176 PANTHER PTHR35562 1 175 5.5E-104 T 23-04-2016 VV93_RS10815 2d2cc416a4ad2bbf55744bb3d5c85a91 176 SMART SM00463 94 172 7.9E-16 T 23-04-2016 IPR002625 Smr domain VV93_RS10815 2d2cc416a4ad2bbf55744bb3d5c85a91 176 PANTHER PTHR35562:SF1 1 175 5.5E-104 T 23-04-2016 VV93_RS10815 2d2cc416a4ad2bbf55744bb3d5c85a91 176 Pfam PF01713 Smr domain 97 171 1.1E-17 T 23-04-2016 IPR002625 Smr domain VV93_RS10815 2d2cc416a4ad2bbf55744bb3d5c85a91 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 40.034 T 23-04-2016 IPR022990 Uncharacterised protein family UPF0115 VV93_RS10815 2d2cc416a4ad2bbf55744bb3d5c85a91 176 SUPERFAMILY SSF160443 95 171 1.83E-11 T 23-04-2016 IPR002625 Smr domain VV93_RS08880 76bfacdca63d1566b0c05eee42674262 276 SUPERFAMILY SSF109604 6 229 1.76E-56 T 23-04-2016 VV93_RS08880 76bfacdca63d1566b0c05eee42674262 276 PANTHER PTHR33525 1 228 1.1E-48 T 23-04-2016 VV93_RS08880 76bfacdca63d1566b0c05eee42674262 276 Pfam PF08668 HDOD domain 13 204 1.8E-55 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD VV93_RS08880 76bfacdca63d1566b0c05eee42674262 276 PANTHER PTHR33525:SF3 1 228 1.1E-48 T 23-04-2016 VV93_RS08880 76bfacdca63d1566b0c05eee42674262 276 Gene3D G3DSA:1.10.3150.10 5 237 2.7E-65 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD VV93_RS09120 ef487562ea518692358b6a43e0c69996 492 Pfam PF16116 Domain of unknown function (DUF4832) 310 470 2.4E-17 T 23-04-2016 IPR032267 Domain of unknown function DUF4832 VV93_RS09120 ef487562ea518692358b6a43e0c69996 492 Gene3D G3DSA:3.20.20.80 88 233 9.9E-10 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VV93_RS09120 ef487562ea518692358b6a43e0c69996 492 Pfam PF02449 Beta-galactosidase 87 200 2.0E-7 T 23-04-2016 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV93_RS09120 ef487562ea518692358b6a43e0c69996 492 SUPERFAMILY SSF51445 88 282 2.45E-12 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily VV93_RS17155 ab7d7e4417fed8d07f472eec63c9c448 318 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 2 318 7.6E-115 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VV93_RS17155 ab7d7e4417fed8d07f472eec63c9c448 318 PANTHER PTHR32248 1 318 1.1E-123 T 23-04-2016 VV93_RS17155 ab7d7e4417fed8d07f472eec63c9c448 318 Pfam PF04963 Sigma-54 factor, core binding domain 1 171 1.8E-51 T 23-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 VV93_RS17155 ab7d7e4417fed8d07f472eec63c9c448 318 PANTHER PTHR32248:SF4 1 318 1.1E-123 T 23-04-2016 VV93_RS17155 ab7d7e4417fed8d07f472eec63c9c448 318 PRINTS PR00045 Sigma-54 factor signature 54 71 1.0E-19 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VV93_RS17155 ab7d7e4417fed8d07f472eec63c9c448 318 PRINTS PR00045 Sigma-54 factor signature 242 254 1.0E-19 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VV93_RS17155 ab7d7e4417fed8d07f472eec63c9c448 318 PRINTS PR00045 Sigma-54 factor signature 258 269 1.0E-19 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VV93_RS17155 ab7d7e4417fed8d07f472eec63c9c448 318 Pfam PF04552 Sigma-54, DNA binding domain 183 318 1.6E-57 T 23-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding VV93_RS17155 ab7d7e4417fed8d07f472eec63c9c448 318 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 230 249 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VV93_RS02180 ed48143c9a87bf3ecd03a8452c70a2ab 267 PANTHER PTHR24220 8 263 1.0E-186 T 23-04-2016 VV93_RS02180 ed48143c9a87bf3ecd03a8452c70a2ab 267 SMART SM00382 31 228 6.1E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS02180 ed48143c9a87bf3ecd03a8452c70a2ab 267 PANTHER PTHR24220:SF368 8 263 1.0E-186 T 23-04-2016 VV93_RS02180 ed48143c9a87bf3ecd03a8452c70a2ab 267 Gene3D G3DSA:3.40.50.300 4 235 6.0E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02180 ed48143c9a87bf3ecd03a8452c70a2ab 267 SUPERFAMILY SSF52540 6 242 2.21E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02180 ed48143c9a87bf3ecd03a8452c70a2ab 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS02180 ed48143c9a87bf3ecd03a8452c70a2ab 267 Pfam PF00005 ABC transporter 23 170 1.4E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS10505 e40c088cf98cd3008718670a92678c7c 180 SUPERFAMILY SSF53474 2 176 5.92E-6 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS10505 e40c088cf98cd3008718670a92678c7c 180 Gene3D G3DSA:3.40.50.1820 2 163 3.3E-4 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS10505 e40c088cf98cd3008718670a92678c7c 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 49.286 T 23-04-2016 IPR022987 Uncharacterised protein family UPF0227 VV93_RS10505 e40c088cf98cd3008718670a92678c7c 180 PANTHER PTHR35602 1 177 6.5E-130 T 23-04-2016 VV93_RS10505 e40c088cf98cd3008718670a92678c7c 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 9.6E-71 T 23-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VV93_RS10505 e40c088cf98cd3008718670a92678c7c 180 PANTHER PTHR35602:SF2 1 177 6.5E-130 T 23-04-2016 VV93_RS10725 4c1a7020ec9a1ec4f10e49191bd442c0 368 SMART SM00448 20 132 6.1E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS10725 4c1a7020ec9a1ec4f10e49191bd442c0 368 Pfam PF00072 Response regulator receiver domain 23 132 2.3E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS10725 4c1a7020ec9a1ec4f10e49191bd442c0 368 PANTHER PTHR26402 24 137 4.9E-34 T 23-04-2016 VV93_RS10725 4c1a7020ec9a1ec4f10e49191bd442c0 368 SUPERFAMILY SSF52172 22 138 2.85E-33 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS10725 4c1a7020ec9a1ec4f10e49191bd442c0 368 Gene3D G3DSA:3.40.50.2300 22 144 9.7E-34 T 23-04-2016 VV93_RS00570 45cf2ddac14ef7f9222c65a9d651a0a3 322 Pfam PF02687 FtsX-like permease family 199 317 5.3E-10 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VV93_RS00570 45cf2ddac14ef7f9222c65a9d651a0a3 322 PIRSF PIRSF003097 24 318 3.1E-59 T 23-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 VV93_RS11470 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 PIRSF PIRSF005650 4 241 1.2E-88 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VV93_RS11470 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.126 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VV93_RS11470 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 Pfam PF00696 Amino acid kinase family 11 219 6.5E-27 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS11470 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 SUPERFAMILY SSF53633 7 240 1.31E-72 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS11470 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 PANTHER PTHR21499 4 241 3.7E-113 T 23-04-2016 VV93_RS11470 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 PANTHER PTHR21499:SF23 4 241 3.7E-113 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VV93_RS11470 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 4.6E-102 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VV93_RS11470 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 Gene3D G3DSA:3.40.1160.10 2 240 8.0E-88 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VV93_RS05900 544fcc5c4c890cb854ca3ae11e7d867c 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 546 554 1.6E-10 T 23-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS05900 544fcc5c4c890cb854ca3ae11e7d867c 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 494 506 1.6E-10 T 23-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS05900 544fcc5c4c890cb854ca3ae11e7d867c 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 417 430 1.6E-10 T 23-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS05900 544fcc5c4c890cb854ca3ae11e7d867c 789 PANTHER PTHR10322 15 42 2.1E-166 T 23-04-2016 VV93_RS05900 544fcc5c4c890cb854ca3ae11e7d867c 789 PANTHER PTHR10322 155 776 2.1E-166 T 23-04-2016 VV93_RS05900 544fcc5c4c890cb854ca3ae11e7d867c 789 SUPERFAMILY SSF56672 387 784 2.28E-114 T 23-04-2016 VV93_RS05900 544fcc5c4c890cb854ca3ae11e7d867c 789 SUPERFAMILY SSF53098 5 391 3.09E-85 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS05900 544fcc5c4c890cb854ca3ae11e7d867c 789 Pfam PF03104 DNA polymerase family B, exonuclease domain 84 298 1.3E-15 T 23-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS05900 544fcc5c4c890cb854ca3ae11e7d867c 789 Gene3D G3DSA:3.30.420.10 155 368 2.0E-37 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS05900 544fcc5c4c890cb854ca3ae11e7d867c 789 Pfam PF00136 DNA polymerase family B 378 746 1.3E-42 T 23-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS05900 544fcc5c4c890cb854ca3ae11e7d867c 789 ProSitePatterns PS00116 DNA polymerase family B signature. 548 556 - T 23-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS05900 544fcc5c4c890cb854ca3ae11e7d867c 789 Gene3D G3DSA:3.90.1600.10 517 642 1.2E-10 T 23-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS05900 544fcc5c4c890cb854ca3ae11e7d867c 789 Gene3D G3DSA:3.90.1600.10 414 433 1.2E-10 T 23-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS05900 544fcc5c4c890cb854ca3ae11e7d867c 789 SMART SM00486 155 560 7.0E-60 T 23-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS04580 89b4c4d2f3aff6674ee41226f69378be 434 PRINTS PR01005 Flagellar hook-associated protein signature 8 31 6.4E-5 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VV93_RS04580 89b4c4d2f3aff6674ee41226f69378be 434 PRINTS PR01005 Flagellar hook-associated protein signature 239 261 6.4E-5 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VV93_RS04580 89b4c4d2f3aff6674ee41226f69378be 434 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 355 433 8.2E-16 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VV93_RS04580 89b4c4d2f3aff6674ee41226f69378be 434 SUPERFAMILY SSF117143 78 395 1.03E-72 T 23-04-2016 VV93_RS04580 89b4c4d2f3aff6674ee41226f69378be 434 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VV93_RS04580 89b4c4d2f3aff6674ee41226f69378be 434 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 416 2.3E-98 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VV93_RS04580 89b4c4d2f3aff6674ee41226f69378be 434 Pfam PF07559 Flagellar basal body protein FlaE 181 314 4.4E-23 T 23-04-2016 IPR011491 Flagellar hook protein FlgE VV93_RS04580 89b4c4d2f3aff6674ee41226f69378be 434 PANTHER PTHR30435 312 434 2.3E-90 T 23-04-2016 VV93_RS04580 89b4c4d2f3aff6674ee41226f69378be 434 PANTHER PTHR30435 1 126 2.3E-90 T 23-04-2016 VV93_RS04580 89b4c4d2f3aff6674ee41226f69378be 434 Pfam PF00460 Flagella basal body rod protein 3 32 7.1E-11 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VV93_RS04580 89b4c4d2f3aff6674ee41226f69378be 434 PANTHER PTHR30435:SF1 312 434 2.3E-90 T 23-04-2016 VV93_RS04580 89b4c4d2f3aff6674ee41226f69378be 434 PANTHER PTHR30435:SF1 1 126 2.3E-90 T 23-04-2016 VV93_RS01680 f15b20be53f135e75c346e6e8be58e77 146 SUPERFAMILY SSF52788 1 146 1.83E-41 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily VV93_RS01680 f15b20be53f135e75c346e6e8be58e77 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 114 8.2E-27 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV93_RS01680 f15b20be53f135e75c346e6e8be58e77 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 8.2E-27 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV93_RS01680 f15b20be53f135e75c346e6e8be58e77 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 8.2E-27 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV93_RS01680 f15b20be53f135e75c346e6e8be58e77 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 8.2E-27 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV93_RS01680 f15b20be53f135e75c346e6e8be58e77 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 8.2E-27 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV93_RS01680 f15b20be53f135e75c346e6e8be58e77 146 PANTHER PTHR11717:SF20 1 146 2.2E-46 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV93_RS01680 f15b20be53f135e75c346e6e8be58e77 146 PANTHER PTHR11717 1 146 2.2E-46 T 23-04-2016 VV93_RS01680 f15b20be53f135e75c346e6e8be58e77 146 Gene3D G3DSA:3.40.50.270 2 146 1.3E-44 T 23-04-2016 VV93_RS01680 f15b20be53f135e75c346e6e8be58e77 146 SMART SM00226 3 145 3.2E-51 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily VV93_RS01680 f15b20be53f135e75c346e6e8be58e77 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 143 8.0E-37 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily VV93_RS09790 fce39280228432004504b1be79e5537a 443 PANTHER PTHR30124:SF2 297 363 5.6E-12 T 23-04-2016 VV93_RS09790 fce39280228432004504b1be79e5537a 443 PANTHER PTHR30124 297 363 5.6E-12 T 23-04-2016 VV93_RS09790 fce39280228432004504b1be79e5537a 443 Pfam PF07805 HipA-like N-terminal domain 175 270 3.9E-15 T 23-04-2016 IPR012894 HipA, N-terminal subdomain 2 VV93_RS09790 fce39280228432004504b1be79e5537a 443 Pfam PF13657 HipA N-terminal domain 8 117 1.9E-21 T 23-04-2016 IPR017508 HipA, N-terminal subdomain 1 VV93_RS09790 fce39280228432004504b1be79e5537a 443 Pfam PF07804 HipA-like C-terminal domain 276 417 2.7E-25 T 23-04-2016 IPR012893 HipA-like, C-terminal VV93_RS07465 a28b515c0e4aed5d8f9fc4347aae626d 220 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 88 118 - T 23-04-2016 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 VV93_RS07465 a28b515c0e4aed5d8f9fc4347aae626d 220 PANTHER PTHR23291 1 220 7.3E-95 T 23-04-2016 IPR006214 Bax inhibitor 1-related VV93_RS07465 a28b515c0e4aed5d8f9fc4347aae626d 220 PANTHER PTHR23291:SF37 1 220 7.3E-95 T 23-04-2016 VV93_RS07465 a28b515c0e4aed5d8f9fc4347aae626d 220 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 1.4E-38 T 23-04-2016 VV93_RS06180 ab786f3da050e2288c879e9dabb1edcc 476 PANTHER PTHR30009:SF2 6 475 6.5E-236 T 23-04-2016 VV93_RS06180 ab786f3da050e2288c879e9dabb1edcc 476 Gene3D G3DSA:3.30.1360.60 398 472 9.1E-26 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VV93_RS06180 ab786f3da050e2288c879e9dabb1edcc 476 PANTHER PTHR30009 6 475 6.5E-236 T 23-04-2016 VV93_RS06180 ab786f3da050e2288c879e9dabb1edcc 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VV93_RS06180 ab786f3da050e2288c879e9dabb1edcc 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 377 458 2.6E-20 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VV93_RS06180 ab786f3da050e2288c879e9dabb1edcc 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 1.5E-74 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VV93_RS06180 ab786f3da050e2288c879e9dabb1edcc 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 7.4E-12 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VV93_RS06180 ab786f3da050e2288c879e9dabb1edcc 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 1.1E-196 T 23-04-2016 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VV93_RS06180 ab786f3da050e2288c879e9dabb1edcc 476 SUPERFAMILY SSF55604 399 472 8.37E-20 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VV93_RS02220 c458952e90dc4cd0483e38fa427438a0 145 PANTHER PTHR31964:SF42 1 144 8.1E-30 T 23-04-2016 VV93_RS02220 c458952e90dc4cd0483e38fa427438a0 145 PANTHER PTHR31964 1 144 8.1E-30 T 23-04-2016 VV93_RS02220 c458952e90dc4cd0483e38fa427438a0 145 Gene3D G3DSA:3.40.50.620 1 144 1.1E-38 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS02220 c458952e90dc4cd0483e38fa427438a0 145 SUPERFAMILY SSF52402 2 144 2.85E-36 T 23-04-2016 VV93_RS02220 c458952e90dc4cd0483e38fa427438a0 145 Pfam PF00582 Universal stress protein family 1 142 5.7E-33 T 23-04-2016 IPR006016 UspA GO:0006950 VV93_RS02220 c458952e90dc4cd0483e38fa427438a0 145 PIRSF PIRSF006276 1 145 5.0E-20 T 23-04-2016 IPR006015 Universal stress protein A VV93_RS02220 c458952e90dc4cd0483e38fa427438a0 145 PRINTS PR01438 Universal stress protein signature 120 142 9.45069E-12 T 23-04-2016 IPR006015 Universal stress protein A VV93_RS02220 c458952e90dc4cd0483e38fa427438a0 145 PRINTS PR01438 Universal stress protein signature 2 20 9.45069E-12 T 23-04-2016 IPR006015 Universal stress protein A VV93_RS02220 c458952e90dc4cd0483e38fa427438a0 145 PRINTS PR01438 Universal stress protein signature 102 114 9.45069E-12 T 23-04-2016 IPR006015 Universal stress protein A VV93_RS12160 5734f8b9c1db9af8f96042f28b4ef47a 292 PANTHER PTHR30217:SF8 1 292 2.9E-198 T 23-04-2016 VV93_RS12160 5734f8b9c1db9af8f96042f28b4ef47a 292 Pfam PF01136 Peptidase family U32 82 236 2.5E-12 T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VV93_RS12160 5734f8b9c1db9af8f96042f28b4ef47a 292 PANTHER PTHR30217 1 292 2.9E-198 T 23-04-2016 VV93_RS05430 aa8abe897384cbf76cde90a42e3032b9 141 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 32 133 9.5E-40 T 23-04-2016 VV93_RS05430 aa8abe897384cbf76cde90a42e3032b9 141 PANTHER PTHR38013 1 141 4.5E-44 T 23-04-2016 VV93_RS14120 cdd0ffdf8165f16d19c21c3411c07eb7 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 7.6E-140 T 23-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 VV93_RS14120 cdd0ffdf8165f16d19c21c3411c07eb7 339 PANTHER PTHR30420:SF1 1 338 4.9E-190 T 23-04-2016 VV93_RS14120 cdd0ffdf8165f16d19c21c3411c07eb7 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 2.2E-130 T 23-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 VV93_RS14120 cdd0ffdf8165f16d19c21c3411c07eb7 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 2.1E-132 T 23-04-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 VV93_RS14120 cdd0ffdf8165f16d19c21c3411c07eb7 339 Gene3D G3DSA:2.40.40.20 277 338 3.3E-16 T 23-04-2016 VV93_RS14120 cdd0ffdf8165f16d19c21c3411c07eb7 339 PANTHER PTHR30420 1 338 4.9E-190 T 23-04-2016 VV93_RS14120 cdd0ffdf8165f16d19c21c3411c07eb7 339 SUPERFAMILY SSF55729 1 338 9.21E-130 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS01905 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01905 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01905 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 8.8E-19 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01905 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01905 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS01905 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 23-04-2016 VV93_RS01905 756d9a7dbdd6c76983597e7873ac5986 37 PANTHER PTHR18804 1 37 3.4E-18 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS04545 532efe95a5ed9d12632404154348643b 108 SUPERFAMILY SSF101498 3 99 7.19E-20 T 23-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VV93_RS04545 532efe95a5ed9d12632404154348643b 108 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 3 99 1.5E-25 T 23-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VV93_RS04545 532efe95a5ed9d12632404154348643b 108 Pfam PF04316 Anti-sigma-28 factor, FlgM 43 96 5.7E-19 T 23-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal VV93_RS09065 db597222b30a0a730465f831265c5c5e 148 Gene3D G3DSA:1.10.3680.10 2 145 2.3E-25 T 23-04-2016 IPR029024 TerB-like VV93_RS09065 db597222b30a0a730465f831265c5c5e 148 SUPERFAMILY SSF158682 2 147 3.01E-30 T 23-04-2016 IPR029024 TerB-like VV93_RS09065 db597222b30a0a730465f831265c5c5e 148 Pfam PF05099 Tellurite resistance protein TerB 9 143 1.2E-39 T 23-04-2016 IPR007791 Co-chaperone DjlA, N-terminal VV93_RS04865 82f15fc8029fe3109d4ac1951a7c27a0 440 PANTHER PTHR22912 1 437 5.5E-117 T 23-04-2016 VV93_RS04865 82f15fc8029fe3109d4ac1951a7c27a0 440 Gene3D G3DSA:3.50.50.60 106 312 1.0E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS04865 82f15fc8029fe3109d4ac1951a7c27a0 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 5.8E-22 T 23-04-2016 VV93_RS04865 82f15fc8029fe3109d4ac1951a7c27a0 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 5.8E-22 T 23-04-2016 VV93_RS04865 82f15fc8029fe3109d4ac1951a7c27a0 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 5.8E-22 T 23-04-2016 VV93_RS04865 82f15fc8029fe3109d4ac1951a7c27a0 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 5.8E-22 T 23-04-2016 VV93_RS04865 82f15fc8029fe3109d4ac1951a7c27a0 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 5.8E-22 T 23-04-2016 VV93_RS04865 82f15fc8029fe3109d4ac1951a7c27a0 440 Gene3D G3DSA:3.30.390.30 331 439 1.0E-36 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VV93_RS04865 82f15fc8029fe3109d4ac1951a7c27a0 440 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1 303 4.9E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS04865 82f15fc8029fe3109d4ac1951a7c27a0 440 SUPERFAMILY SSF51905 1 312 9.15E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS04865 82f15fc8029fe3109d4ac1951a7c27a0 440 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 327 428 1.1E-16 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VV93_RS04865 82f15fc8029fe3109d4ac1951a7c27a0 440 PANTHER PTHR22912:SF140 1 437 5.5E-117 T 23-04-2016 VV93_RS04865 82f15fc8029fe3109d4ac1951a7c27a0 440 SUPERFAMILY SSF55424 319 438 1.37E-31 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 VV93_RS04865 82f15fc8029fe3109d4ac1951a7c27a0 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 4.1E-16 T 23-04-2016 VV93_RS04865 82f15fc8029fe3109d4ac1951a7c27a0 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 4.1E-16 T 23-04-2016 VV93_RS04865 82f15fc8029fe3109d4ac1951a7c27a0 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 4.1E-16 T 23-04-2016 VV93_RS04865 82f15fc8029fe3109d4ac1951a7c27a0 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 4.1E-16 T 23-04-2016 VV93_RS04865 82f15fc8029fe3109d4ac1951a7c27a0 440 Gene3D G3DSA:3.50.50.60 1 105 7.2E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS06395 9effa1a6e912e492fae10fe6ec62321e 288 Pfam PF01435 Peptidase family M48 78 287 9.3E-40 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VV93_RS06395 9effa1a6e912e492fae10fe6ec62321e 288 Hamap MF_00188 Protease HtpX [htpX]. 1 288 25.464 T 23-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 VV93_RS06395 9effa1a6e912e492fae10fe6ec62321e 288 Gene3D G3DSA:3.30.2010.10 73 160 2.5E-33 T 23-04-2016 VV93_RS06395 9effa1a6e912e492fae10fe6ec62321e 288 PANTHER PTHR10120:SF19 1 288 2.0E-101 T 23-04-2016 VV93_RS06395 9effa1a6e912e492fae10fe6ec62321e 288 PANTHER PTHR10120 1 288 2.0E-101 T 23-04-2016 VV93_RS10190 199eed60778610d86c172e491e8ece4f 266 PANTHER PTHR30336 1 257 1.5E-71 T 23-04-2016 VV93_RS10190 199eed60778610d86c172e491e8ece4f 266 Gene3D G3DSA:3.40.50.620 75 210 8.7E-16 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS10190 199eed60778610d86c172e491e8ece4f 266 PANTHER PTHR30336:SF1 1 257 1.5E-71 T 23-04-2016 VV93_RS10190 199eed60778610d86c172e491e8ece4f 266 Pfam PF02698 DUF218 domain 80 242 4.0E-27 T 23-04-2016 IPR003848 Domain of unknown function DUF218 VV93_RS12480 b14b398978f507253e701f01f3937b96 161 SUPERFAMILY SSF55083 1 157 8.24E-55 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VV93_RS12480 b14b398978f507253e701f01f3937b96 161 Gene3D G3DSA:3.30.70.560 3 154 5.7E-58 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VV93_RS12480 b14b398978f507253e701f01f3937b96 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 1.7E-37 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VV93_RS12480 b14b398978f507253e701f01f3937b96 161 PANTHER PTHR20941:SF10 1 160 8.1E-75 T 23-04-2016 VV93_RS12480 b14b398978f507253e701f01f3937b96 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VV93_RS12480 b14b398978f507253e701f01f3937b96 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 6.5E-47 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VV93_RS12480 b14b398978f507253e701f01f3937b96 161 PANTHER PTHR20941 1 160 8.1E-75 T 23-04-2016 VV93_RS07925 ea54efc96f97ca930c782e5d1e3c88bf 457 Pfam PF05707 Zonular occludens toxin (Zot) 2 256 6.7E-48 T 23-04-2016 IPR008900 Zona occludens toxin VV93_RS07925 ea54efc96f97ca930c782e5d1e3c88bf 457 Gene3D G3DSA:3.40.50.300 1 113 5.6E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS07925 ea54efc96f97ca930c782e5d1e3c88bf 457 Gene3D G3DSA:3.40.50.300 170 254 5.6E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02580 d1a8296260fbd2c689f80b8f61ff8292 147 SUPERFAMILY SSF89095 1 146 1.73E-44 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 VV93_RS02580 d1a8296260fbd2c689f80b8f61ff8292 147 PANTHER PTHR28055 1 147 5.8E-53 T 23-04-2016 VV93_RS02580 d1a8296260fbd2c689f80b8f61ff8292 147 PANTHER PTHR28055:SF1 1 147 5.8E-53 T 23-04-2016 VV93_RS02580 d1a8296260fbd2c689f80b8f61ff8292 147 Pfam PF09424 Yqey-like protein 5 146 9.3E-58 T 23-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial VV93_RS02580 d1a8296260fbd2c689f80b8f61ff8292 147 Gene3D G3DSA:1.10.1510.10 1 90 2.4E-33 T 23-04-2016 VV93_RS02580 d1a8296260fbd2c689f80b8f61ff8292 147 Gene3D G3DSA:1.10.10.410 91 147 2.0E-24 T 23-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal VV93_RS08260 6a24065088e67ceef0836dc3632cf9bf 456 Pfam PF01554 MatE 17 176 3.5E-34 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VV93_RS08260 6a24065088e67ceef0836dc3632cf9bf 456 Pfam PF01554 MatE 243 403 6.6E-35 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VV93_RS08260 6a24065088e67ceef0836dc3632cf9bf 456 PANTHER PTHR11206:SF153 2 450 1.6E-208 T 23-04-2016 VV93_RS08260 6a24065088e67ceef0836dc3632cf9bf 456 PANTHER PTHR11206 2 450 1.6E-208 T 23-04-2016 VV93_RS08260 6a24065088e67ceef0836dc3632cf9bf 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 1.9E-113 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VV93_RS08260 6a24065088e67ceef0836dc3632cf9bf 456 PIRSF PIRSF006603 5 454 6.4E-58 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VV93_RS13765 938c23feb2234aa067d34f57176a6ecc 149 Gene3D G3DSA:3.40.5.10 1 52 1.6E-25 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal VV93_RS13765 938c23feb2234aa067d34f57176a6ecc 149 Gene3D G3DSA:3.10.430.100 61 149 2.5E-28 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal VV93_RS13765 938c23feb2234aa067d34f57176a6ecc 149 SUPERFAMILY SSF55658 1 57 1.52E-19 T 23-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VV93_RS13765 938c23feb2234aa067d34f57176a6ecc 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.707 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13765 938c23feb2234aa067d34f57176a6ecc 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.8E-55 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13765 938c23feb2234aa067d34f57176a6ecc 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal VV93_RS13765 938c23feb2234aa067d34f57176a6ecc 149 SUPERFAMILY SSF55653 60 149 7.06E-26 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal VV93_RS13765 938c23feb2234aa067d34f57176a6ecc 149 PANTHER PTHR21368 1 149 1.1E-52 T 23-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13765 938c23feb2234aa067d34f57176a6ecc 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 5.8E-22 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal VV93_RS13765 938c23feb2234aa067d34f57176a6ecc 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 3.2E-25 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal VV93_RS11930 84d496f3144091787a5ce22297b80169 301 PANTHER PTHR30118:SF8 2 296 1.2E-65 T 23-04-2016 VV93_RS11930 84d496f3144091787a5ce22297b80169 301 Pfam PF03466 LysR substrate binding domain 97 296 9.2E-26 T 23-04-2016 IPR005119 LysR, substrate-binding VV93_RS11930 84d496f3144091787a5ce22297b80169 301 Gene3D G3DSA:3.40.190.10 176 270 4.2E-19 T 23-04-2016 VV93_RS11930 84d496f3144091787a5ce22297b80169 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 5.4E-12 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV93_RS11930 84d496f3144091787a5ce22297b80169 301 PANTHER PTHR30118 2 296 1.2E-65 T 23-04-2016 VV93_RS11930 84d496f3144091787a5ce22297b80169 301 SUPERFAMILY SSF46785 6 84 8.16E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS11930 84d496f3144091787a5ce22297b80169 301 Gene3D G3DSA:1.10.10.10 4 84 1.3E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS11930 84d496f3144091787a5ce22297b80169 301 SUPERFAMILY SSF53850 93 298 1.28E-36 T 23-04-2016 VV93_RS11930 84d496f3144091787a5ce22297b80169 301 Gene3D G3DSA:3.40.190.10 93 175 1.9E-25 T 23-04-2016 VV93_RS11930 84d496f3144091787a5ce22297b80169 301 Gene3D G3DSA:3.40.190.10 275 298 1.9E-25 T 23-04-2016 VV93_RS03005 1125b3d6a2ecb94834bfa0caa3b2f86a 293 SMART SM00518 12 288 3.6E-121 T 23-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VV93_RS03005 1125b3d6a2ecb94834bfa0caa3b2f86a 293 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 78 86 - T 23-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VV93_RS03005 1125b3d6a2ecb94834bfa0caa3b2f86a 293 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 12 285 3.4E-106 T 23-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VV93_RS03005 1125b3d6a2ecb94834bfa0caa3b2f86a 293 PANTHER PTHR21445:SF0 10 291 1.0E-160 T 23-04-2016 VV93_RS03005 1125b3d6a2ecb94834bfa0caa3b2f86a 293 Hamap MF_00152 Probable endonuclease 4 [nfo]. 11 288 42.127 T 23-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VV93_RS03005 1125b3d6a2ecb94834bfa0caa3b2f86a 293 SUPERFAMILY SSF51658 12 287 2.88E-98 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VV93_RS03005 1125b3d6a2ecb94834bfa0caa3b2f86a 293 PANTHER PTHR21445 10 291 1.0E-160 T 23-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VV93_RS03005 1125b3d6a2ecb94834bfa0caa3b2f86a 293 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 23-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VV93_RS03005 1125b3d6a2ecb94834bfa0caa3b2f86a 293 Gene3D G3DSA:3.20.20.150 11 287 8.5E-118 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VV93_RS03005 1125b3d6a2ecb94834bfa0caa3b2f86a 293 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 4.0E-39 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VV93_RS03005 1125b3d6a2ecb94834bfa0caa3b2f86a 293 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 23-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VV93_RS06280 973142f61ab59d546bf54968b41ea810 347 SUPERFAMILY SSF161098 139 325 3.4E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06280 973142f61ab59d546bf54968b41ea810 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 8.3E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06280 973142f61ab59d546bf54968b41ea810 347 Gene3D G3DSA:1.10.3720.10 136 340 2.4E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06280 973142f61ab59d546bf54968b41ea810 347 PANTHER PTHR30325 1 347 7.3E-116 T 23-04-2016 VV93_RS10805 ee32bd45e834d7e4596fc6e6a1483a4c 361 PANTHER PTHR21085 2 352 1.7E-223 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS10805 ee32bd45e834d7e4596fc6e6a1483a4c 361 Pfam PF01264 Chorismate synthase 10 345 1.6E-145 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS10805 ee32bd45e834d7e4596fc6e6a1483a4c 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS10805 ee32bd45e834d7e4596fc6e6a1483a4c 361 Gene3D G3DSA:3.60.150.10 9 352 4.2E-164 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS10805 ee32bd45e834d7e4596fc6e6a1483a4c 361 SUPERFAMILY SSF103263 4 354 3.53E-151 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS10805 ee32bd45e834d7e4596fc6e6a1483a4c 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS10805 ee32bd45e834d7e4596fc6e6a1483a4c 361 PIRSF PIRSF001456 3 360 6.9E-144 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS10805 ee32bd45e834d7e4596fc6e6a1483a4c 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS10805 ee32bd45e834d7e4596fc6e6a1483a4c 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 9.2E-145 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS10805 ee32bd45e834d7e4596fc6e6a1483a4c 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 38.041 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS11670 27bf0d438d536f8c524bfd313c25fde7 466 Gene3D G3DSA:1.20.1250.20 18 223 8.5E-18 T 23-04-2016 VV93_RS11670 27bf0d438d536f8c524bfd313c25fde7 466 Gene3D G3DSA:1.20.1250.20 255 453 1.3E-19 T 23-04-2016 VV93_RS11670 27bf0d438d536f8c524bfd313c25fde7 466 PANTHER PTHR12778 19 436 6.8E-92 T 23-04-2016 VV93_RS11670 27bf0d438d536f8c524bfd313c25fde7 466 Pfam PF07690 Major Facilitator Superfamily 24 342 6.1E-17 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV93_RS11670 27bf0d438d536f8c524bfd313c25fde7 466 SUPERFAMILY SSF103473 9 438 4.71E-39 T 23-04-2016 IPR020846 Major facilitator superfamily domain VV93_RS04105 a7931b7f9582eb05e2a9d5583b432f8a 317 Pfam PF00691 OmpA family 195 293 1.3E-18 T 23-04-2016 IPR006665 OmpA-like domain VV93_RS04105 a7931b7f9582eb05e2a9d5583b432f8a 317 PANTHER PTHR30329 105 311 2.9E-108 T 23-04-2016 VV93_RS04105 a7931b7f9582eb05e2a9d5583b432f8a 317 PANTHER PTHR30329 5 70 2.9E-108 T 23-04-2016 VV93_RS04105 a7931b7f9582eb05e2a9d5583b432f8a 317 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 57 2.8E-17 T 23-04-2016 IPR025713 Motility protein B, N-terminal domain VV93_RS04105 a7931b7f9582eb05e2a9d5583b432f8a 317 Gene3D G3DSA:3.30.1330.60 171 299 1.1E-31 T 23-04-2016 IPR006665 OmpA-like domain VV93_RS04105 a7931b7f9582eb05e2a9d5583b432f8a 317 PANTHER PTHR30329:SF4 105 311 2.9E-108 T 23-04-2016 VV93_RS04105 a7931b7f9582eb05e2a9d5583b432f8a 317 PANTHER PTHR30329:SF4 5 70 2.9E-108 T 23-04-2016 VV93_RS04105 a7931b7f9582eb05e2a9d5583b432f8a 317 SUPERFAMILY SSF103088 182 299 8.76E-31 T 23-04-2016 IPR006665 OmpA-like domain VV93_RS06245 775e880d27e5b25d5775057e9a369c3b 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 2.5E-85 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 VV93_RS06245 775e880d27e5b25d5775057e9a369c3b 226 SUPERFAMILY SSF52540 6 223 2.93E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06245 775e880d27e5b25d5775057e9a369c3b 226 PANTHER PTHR21299 6 225 7.5E-80 T 23-04-2016 VV93_RS06245 775e880d27e5b25d5775057e9a369c3b 226 Gene3D G3DSA:3.40.50.300 5 221 1.2E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06245 775e880d27e5b25d5775057e9a369c3b 226 Pfam PF02224 Cytidylate kinase 8 221 1.7E-78 T 23-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 VV93_RS06245 775e880d27e5b25d5775057e9a369c3b 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.6 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 VV93_RS08410 fc5d6f360156eae166c0c64d374a9067 73 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 6 68 8.5E-35 T 23-04-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 VV93_RS08410 fc5d6f360156eae166c0c64d374a9067 73 Gene3D G3DSA:1.10.720.30 14 72 4.0E-32 T 23-04-2016 IPR003034 SAP domain VV93_RS09965 43354496473a42c2b1788e1c61fb8d95 410 PANTHER PTHR30629:SF2 1 404 9.7E-159 T 23-04-2016 VV93_RS09965 43354496473a42c2b1788e1c61fb8d95 410 Pfam PF13356 Domain of unknown function (DUF4102) 5 91 6.4E-20 T 23-04-2016 IPR025166 Domain of unknown function DUF4102 VV93_RS09965 43354496473a42c2b1788e1c61fb8d95 410 Gene3D G3DSA:1.10.150.130 103 202 1.6E-14 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal VV93_RS09965 43354496473a42c2b1788e1c61fb8d95 410 PANTHER PTHR30629 1 404 9.7E-159 T 23-04-2016 VV93_RS09965 43354496473a42c2b1788e1c61fb8d95 410 Pfam PF00589 Phage integrase family 210 373 2.5E-24 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS09965 43354496473a42c2b1788e1c61fb8d95 410 SUPERFAMILY SSF56349 103 383 1.41E-56 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS09965 43354496473a42c2b1788e1c61fb8d95 410 Gene3D G3DSA:1.10.443.10 209 379 9.8E-24 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS00895 0a8a6fe0f9acdfb78f4f8adb9add9eae 528 PANTHER PTHR30563 1 511 3.5E-134 T 23-04-2016 VV93_RS00895 0a8a6fe0f9acdfb78f4f8adb9add9eae 528 Pfam PF02646 RmuC family 182 477 5.2E-105 T 23-04-2016 IPR003798 DNA recombination RmuC VV93_RS11040 14957a5da33ee8fbf1fcd77d4bfd4d61 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 17 103 3.7E-30 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VV93_RS11040 14957a5da33ee8fbf1fcd77d4bfd4d61 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 16 102 2.7E-20 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VV93_RS11040 14957a5da33ee8fbf1fcd77d4bfd4d61 103 PANTHER PTHR34653 1 103 9.6E-25 T 23-04-2016 VV93_RS11040 14957a5da33ee8fbf1fcd77d4bfd4d61 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 3.9E-13 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VV93_RS11040 14957a5da33ee8fbf1fcd77d4bfd4d61 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 3.9E-13 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VV93_RS11040 14957a5da33ee8fbf1fcd77d4bfd4d61 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 3.9E-13 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VV93_RS11040 14957a5da33ee8fbf1fcd77d4bfd4d61 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 103 16.986 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VV93_RS14935 4480756181764478d307f7e3a0a9884a 647 PANTHER PTHR30557 194 636 0.0 T 23-04-2016 VV93_RS14935 4480756181764478d307f7e3a0a9884a 647 PANTHER PTHR30557 3 102 0.0 T 23-04-2016 VV93_RS14935 4480756181764478d307f7e3a0a9884a 647 PANTHER PTHR30557 136 166 0.0 T 23-04-2016 VV93_RS14935 4480756181764478d307f7e3a0a9884a 647 PANTHER PTHR30557:SF1 194 636 0.0 T 23-04-2016 VV93_RS14935 4480756181764478d307f7e3a0a9884a 647 PANTHER PTHR30557:SF1 3 102 0.0 T 23-04-2016 VV93_RS14935 4480756181764478d307f7e3a0a9884a 647 PANTHER PTHR30557:SF1 136 166 0.0 T 23-04-2016 VV93_RS14935 4480756181764478d307f7e3a0a9884a 647 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 597 56.386 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VV93_RS14935 4480756181764478d307f7e3a0a9884a 647 Pfam PF01964 Radical SAM ThiC family 144 592 1.4E-199 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VV93_RS14935 4480756181764478d307f7e3a0a9884a 647 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 5.9E-219 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VV93_RS14935 4480756181764478d307f7e3a0a9884a 647 Pfam PF13667 ThiC-associated domain 22 104 2.9E-33 T 23-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VV93_RS01105 1b811e46b8f49c1c2bc9cefc4879230a 253 Pfam PF01203 Type II secretion system (T2SS), protein N 37 247 9.1E-58 T 23-04-2016 IPR022792 Type II secretion system, protein N VV93_RS12585 bdd5b67dc1bb817ccaa36e51339d9787 64 SUPERFAMILY SSF57716 2 62 3.78E-22 T 23-04-2016 VV93_RS12585 bdd5b67dc1bb817ccaa36e51339d9787 64 Pfam PF03884 Domain of unknown function (DUF329) 7 57 5.3E-25 T 23-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VV93_RS12585 bdd5b67dc1bb817ccaa36e51339d9787 64 Gene3D G3DSA:3.30.50.10 2 63 2.8E-26 T 23-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 VV93_RS12585 bdd5b67dc1bb817ccaa36e51339d9787 64 PANTHER PTHR36150:SF1 2 64 9.9E-26 T 23-04-2016 VV93_RS12585 bdd5b67dc1bb817ccaa36e51339d9787 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.705 T 23-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VV93_RS12585 bdd5b67dc1bb817ccaa36e51339d9787 64 PANTHER PTHR36150 2 64 9.9E-26 T 23-04-2016 VV93_RS08865 3adc4bb3cba207b43706d456a0d60101 269 SUPERFAMILY SSF47413 5 68 9.96E-9 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS08865 3adc4bb3cba207b43706d456a0d60101 269 SMART SM00530 12 66 0.003 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV93_RS08865 3adc4bb3cba207b43706d456a0d60101 269 Gene3D G3DSA:1.10.260.40 5 67 1.8E-6 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS08865 3adc4bb3cba207b43706d456a0d60101 269 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 13 66 7.5E-5 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV93_RS09605 5db4b1070ad87968a5eeaa12d7a81355 264 Gene3D G3DSA:3.40.50.300 1 230 3.9E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09605 5db4b1070ad87968a5eeaa12d7a81355 264 Pfam PF00005 ABC transporter 22 177 4.1E-22 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS09605 5db4b1070ad87968a5eeaa12d7a81355 264 PANTHER PTHR24220 3 251 1.3E-130 T 23-04-2016 VV93_RS09605 5db4b1070ad87968a5eeaa12d7a81355 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS09605 5db4b1070ad87968a5eeaa12d7a81355 264 SMART SM00382 31 226 1.1E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS09605 5db4b1070ad87968a5eeaa12d7a81355 264 PANTHER PTHR24220:SF534 3 251 1.3E-130 T 23-04-2016 VV93_RS09605 5db4b1070ad87968a5eeaa12d7a81355 264 SUPERFAMILY SSF52540 2 230 6.31E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10910 7e557cc2b38d9e272206597e59a80031 166 Pfam PF10975 Protein of unknown function (DUF2802) 68 135 1.9E-22 T 23-04-2016 IPR021244 Protein of unknown function DUF2802 VV93_RS17840 790127c46d5e9475f1039e9b1b64979b 94 PANTHER PTHR23135 3 93 1.6E-16 T 23-04-2016 VV93_RS17840 790127c46d5e9475f1039e9b1b64979b 94 Pfam PF01225 Mur ligase family, catalytic domain 8 87 5.4E-15 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS17840 790127c46d5e9475f1039e9b1b64979b 94 PANTHER PTHR23135:SF4 3 93 1.6E-16 T 23-04-2016 VV93_RS17840 790127c46d5e9475f1039e9b1b64979b 94 Gene3D G3DSA:3.40.1390.10 3 91 1.3E-29 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS17840 790127c46d5e9475f1039e9b1b64979b 94 SUPERFAMILY SSF63418 5 91 1.07E-22 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VV93_RS10495 60edb79ef9ceff248fa0ae454746d0b5 182 SUPERFAMILY SSF55729 3 177 3.24E-44 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS10495 60edb79ef9ceff248fa0ae454746d0b5 182 PANTHER PTHR13256:SF43 1 180 6.7E-42 T 23-04-2016 VV93_RS10495 60edb79ef9ceff248fa0ae454746d0b5 182 PANTHER PTHR13256 1 180 6.7E-42 T 23-04-2016 VV93_RS10495 60edb79ef9ceff248fa0ae454746d0b5 182 Gene3D G3DSA:3.40.630.30 3 177 7.2E-43 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS10495 60edb79ef9ceff248fa0ae454746d0b5 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 1.3E-22 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS02225 59b3cc1ef414985a46a8756da0c4bc49 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 135 670 2.5E-78 T 23-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VV93_RS02225 59b3cc1ef414985a46a8756da0c4bc49 859 PANTHER PTHR33362:SF1 1 351 6.7E-299 T 23-04-2016 VV93_RS02225 59b3cc1ef414985a46a8756da0c4bc49 859 PANTHER PTHR33362:SF1 427 752 6.7E-299 T 23-04-2016 VV93_RS02225 59b3cc1ef414985a46a8756da0c4bc49 859 PANTHER PTHR33362 1 351 6.7E-299 T 23-04-2016 VV93_RS02225 59b3cc1ef414985a46a8756da0c4bc49 859 PANTHER PTHR33362 427 752 6.7E-299 T 23-04-2016 VV93_RS02225 59b3cc1ef414985a46a8756da0c4bc49 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 731 1.7E-213 T 23-04-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein VV93_RS02225 59b3cc1ef414985a46a8756da0c4bc49 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 852 6.1E-68 T 23-04-2016 IPR021814 Protein of unknown function DUF3394 VV93_RS14715 6edc141c52217640b5a79cf530aae1b0 307 PANTHER PTHR10285 269 307 5.9E-154 T 23-04-2016 VV93_RS14715 6edc141c52217640b5a79cf530aae1b0 307 PANTHER PTHR10285 1 253 5.9E-154 T 23-04-2016 VV93_RS14715 6edc141c52217640b5a79cf530aae1b0 307 Gene3D G3DSA:3.40.50.300 2 307 1.7E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14715 6edc141c52217640b5a79cf530aae1b0 307 PANTHER PTHR10285:SF7 269 307 5.9E-154 T 23-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VV93_RS14715 6edc141c52217640b5a79cf530aae1b0 307 PANTHER PTHR10285:SF7 1 253 5.9E-154 T 23-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VV93_RS14715 6edc141c52217640b5a79cf530aae1b0 307 SUPERFAMILY SSF52540 3 307 4.3E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS14715 6edc141c52217640b5a79cf530aae1b0 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 232 3.4E-12 T 23-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 VV93_RS14715 6edc141c52217640b5a79cf530aae1b0 307 PIRSF PIRSF000545 1 307 2.8E-148 T 23-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VV93_RS14715 6edc141c52217640b5a79cf530aae1b0 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 177.179 T 23-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VV93_RS14715 6edc141c52217640b5a79cf530aae1b0 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 307 4.3E-146 T 23-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VV93_RS13280 0a055aba29f4d6d009997417a13d1ab5 225 Pfam PF03167 Uracil DNA glycosylase superfamily 93 208 1.0E-4 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like VV93_RS02620 606e02576234afc662aaa7bb21983970 407 PIRSF PIRSF000813 1 407 3.5E-200 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VV93_RS02620 606e02576234afc662aaa7bb21983970 407 Gene3D G3DSA:1.10.3090.10 122 360 4.5E-54 T 23-04-2016 VV93_RS02620 606e02576234afc662aaa7bb21983970 407 Pfam PF01743 Poly A polymerase head domain 3 122 1.7E-19 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 VV93_RS02620 606e02576234afc662aaa7bb21983970 407 Pfam PF01966 HD domain 229 326 3.4E-6 T 23-04-2016 IPR006674 HD domain VV93_RS02620 606e02576234afc662aaa7bb21983970 407 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 8.8E-12 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain VV93_RS02620 606e02576234afc662aaa7bb21983970 407 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.32 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VV93_RS02620 606e02576234afc662aaa7bb21983970 407 SUPERFAMILY SSF81891 120 401 2.09E-52 T 23-04-2016 VV93_RS02620 606e02576234afc662aaa7bb21983970 407 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 54.01 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VV93_RS02620 606e02576234afc662aaa7bb21983970 407 SUPERFAMILY SSF81301 2 119 2.07E-32 T 23-04-2016 VV93_RS02620 606e02576234afc662aaa7bb21983970 407 Gene3D G3DSA:3.30.460.10 2 121 4.2E-32 T 23-04-2016 VV93_RS02620 606e02576234afc662aaa7bb21983970 407 PANTHER PTHR13734 1 298 3.1E-76 T 23-04-2016 VV93_RS10425 c5428f5e6e04946f077fccfc3ae4cf6b 510 PANTHER PTHR30029 7 510 1.5E-239 T 23-04-2016 VV93_RS10425 c5428f5e6e04946f077fccfc3ae4cf6b 510 Pfam PF04293 SpoVR like protein 17 447 1.4E-178 T 23-04-2016 IPR007390 Sporulation stage V, protein R VV93_RS10425 c5428f5e6e04946f077fccfc3ae4cf6b 510 PANTHER PTHR30029:SF2 7 510 1.5E-239 T 23-04-2016 VV93_RS03690 1988b1297e4fa144869e9de963bbf8ed 325 Pfam PF07885 Ion channel 237 324 2.5E-15 T 23-04-2016 IPR013099 Potassium channel domain VV93_RS03690 1988b1297e4fa144869e9de963bbf8ed 325 SUPERFAMILY SSF81324 230 325 1.23E-16 T 23-04-2016 VV93_RS03690 1988b1297e4fa144869e9de963bbf8ed 325 SUPERFAMILY SSF141571 55 140 4.05E-14 T 23-04-2016 VV93_RS03690 1988b1297e4fa144869e9de963bbf8ed 325 Pfam PF00805 Pentapeptide repeats (8 copies) 90 127 7.5E-8 T 23-04-2016 IPR001646 Pentapeptide repeat VV93_RS03690 1988b1297e4fa144869e9de963bbf8ed 325 Gene3D G3DSA:1.10.287.70 213 324 8.9E-21 T 23-04-2016 VV93_RS00025 8d9609ce339bc5e8f71428a0bd19b329 144 PANTHER PTHR11527 5 144 2.3E-51 T 23-04-2016 IPR031107 Small heat shock protein HSP20 VV93_RS00025 8d9609ce339bc5e8f71428a0bd19b329 144 PANTHER PTHR11527:SF145 5 144 2.3E-51 T 23-04-2016 VV93_RS00025 8d9609ce339bc5e8f71428a0bd19b329 144 Gene3D G3DSA:2.60.40.790 5 136 1.2E-18 T 23-04-2016 IPR008978 HSP20-like chaperone VV93_RS00025 8d9609ce339bc5e8f71428a0bd19b329 144 SUPERFAMILY SSF49764 6 137 1.92E-23 T 23-04-2016 IPR008978 HSP20-like chaperone VV93_RS00025 8d9609ce339bc5e8f71428a0bd19b329 144 Pfam PF00011 Hsp20/alpha crystallin family 43 136 3.1E-19 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain VV93_RS04700 f84e1bf69860f5a7bcf1158f1b2f84be 275 SUPERFAMILY SSF51735 2 270 5.25E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS04700 f84e1bf69860f5a7bcf1158f1b2f84be 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 8.9E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS04700 f84e1bf69860f5a7bcf1158f1b2f84be 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 8.9E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS04700 f84e1bf69860f5a7bcf1158f1b2f84be 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 8.9E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS04700 f84e1bf69860f5a7bcf1158f1b2f84be 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.9E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS04700 f84e1bf69860f5a7bcf1158f1b2f84be 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 8.9E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS04700 f84e1bf69860f5a7bcf1158f1b2f84be 275 Gene3D G3DSA:3.40.50.720 3 273 2.7E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS04700 f84e1bf69860f5a7bcf1158f1b2f84be 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VV93_RS04700 f84e1bf69860f5a7bcf1158f1b2f84be 275 PANTHER PTHR24322 146 178 1.2E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS04700 f84e1bf69860f5a7bcf1158f1b2f84be 275 PANTHER PTHR24322 7 130 1.2E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS04700 f84e1bf69860f5a7bcf1158f1b2f84be 275 Pfam PF00106 short chain dehydrogenase 3 185 2.5E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VV93_RS04700 f84e1bf69860f5a7bcf1158f1b2f84be 275 PANTHER PTHR24322:SF463 146 178 1.2E-52 T 23-04-2016 VV93_RS04700 f84e1bf69860f5a7bcf1158f1b2f84be 275 PANTHER PTHR24322:SF463 7 130 1.2E-52 T 23-04-2016 VV93_RS15275 7322fe8cd366ff657740fc95d9757376 78 Gene3D G3DSA:1.10.260.40 8 47 7.7E-11 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS15275 7322fe8cd366ff657740fc95d9757376 78 SUPERFAMILY SSF47413 9 45 2.93E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS15275 7322fe8cd366ff657740fc95d9757376 78 Pfam PF01381 Helix-turn-helix 11 39 7.1E-6 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV93_RS12925 6452d2fc85683c9038dec568c555c376 191 PANTHER PTHR37528 1 191 2.3E-43 T 23-04-2016 VV93_RS12925 6452d2fc85683c9038dec568c555c376 191 SUPERFAMILY SSF101327 6 178 2.22E-47 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 VV93_RS12925 6452d2fc85683c9038dec568c555c376 191 Pfam PF03695 Uncharacterised protein family (UPF0149) 15 179 4.2E-36 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 VV93_RS12925 6452d2fc85683c9038dec568c555c376 191 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 189 35.88 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 VV93_RS12925 6452d2fc85683c9038dec568c555c376 191 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 23 169 1.7E-10 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 VV93_RS06940 f2cd84fee29d665f9549ce3082276c78 301 PANTHER PTHR35804 2 301 1.8E-85 T 23-04-2016 VV93_RS06940 f2cd84fee29d665f9549ce3082276c78 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 4.0E-87 T 23-04-2016 IPR005642 Lysine exporter LysO VV93_RS06940 f2cd84fee29d665f9549ce3082276c78 301 PANTHER PTHR35804:SF1 2 301 1.8E-85 T 23-04-2016 VV93_RS06940 f2cd84fee29d665f9549ce3082276c78 301 Pfam PF03956 Membrane protein of unknown function (DUF340) 112 297 1.0E-52 T 23-04-2016 IPR005642 Lysine exporter LysO VV93_RS03175 5bae558ac2cd11c8b129ae82765620ba 143 PANTHER PTHR10516:SF329 4 76 3.1E-17 T 23-04-2016 VV93_RS03175 5bae558ac2cd11c8b129ae82765620ba 143 PANTHER PTHR10516:SF329 132 143 3.1E-17 T 23-04-2016 VV93_RS03175 5bae558ac2cd11c8b129ae82765620ba 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 139 9.2E-13 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VV93_RS03175 5bae558ac2cd11c8b129ae82765620ba 143 Gene3D G3DSA:3.10.50.40 3 79 1.3E-18 T 23-04-2016 VV93_RS03175 5bae558ac2cd11c8b129ae82765620ba 143 Gene3D G3DSA:3.10.50.40 129 143 1.3E-18 T 23-04-2016 VV93_RS03175 5bae558ac2cd11c8b129ae82765620ba 143 PANTHER PTHR10516 4 76 3.1E-17 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VV93_RS03175 5bae558ac2cd11c8b129ae82765620ba 143 SUPERFAMILY SSF54534 4 142 9.04E-37 T 23-04-2016 VV93_RS03175 5bae558ac2cd11c8b129ae82765620ba 143 PANTHER PTHR10516 132 143 3.1E-17 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VV93_RS11745 9cc627b54593a9513a510fba1ec7125a 704 Gene3D G3DSA:3.40.50.300 433 466 8.1E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11745 9cc627b54593a9513a510fba1ec7125a 704 Gene3D G3DSA:3.40.50.300 233 401 8.1E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11745 9cc627b54593a9513a510fba1ec7125a 704 Gene3D G3DSA:3.40.50.300 623 679 1.2E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11745 9cc627b54593a9513a510fba1ec7125a 704 Pfam PF13604 AAA domain 238 398 2.0E-31 T 23-04-2016 VV93_RS11745 9cc627b54593a9513a510fba1ec7125a 704 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 22 702 52.614 T 23-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VV93_RS11745 9cc627b54593a9513a510fba1ec7125a 704 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 15 702 3.5E-212 T 23-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VV93_RS11745 9cc627b54593a9513a510fba1ec7125a 704 SUPERFAMILY SSF52540 229 443 3.75E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11745 9cc627b54593a9513a510fba1ec7125a 704 SUPERFAMILY SSF52540 16 163 3.75E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11745 9cc627b54593a9513a510fba1ec7125a 704 PANTHER PTHR10887 231 408 6.2E-88 T 23-04-2016 VV93_RS11745 9cc627b54593a9513a510fba1ec7125a 704 PANTHER PTHR10887:SF351 231 408 6.2E-88 T 23-04-2016 VV93_RS11745 9cc627b54593a9513a510fba1ec7125a 704 Pfam PF13538 UvrD-like helicase C-terminal domain 631 677 1.1E-14 T 23-04-2016 IPR027785 UvrD-like helicase C-terminal domain VV93_RS11745 9cc627b54593a9513a510fba1ec7125a 704 SUPERFAMILY SSF52540 529 701 7.52E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11745 9cc627b54593a9513a510fba1ec7125a 704 SUPERFAMILY SSF52540 363 461 7.52E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09535 d701e32bcf642b98f0672ec43506b221 181 Gene3D G3DSA:3.30.1380.10 64 181 3.6E-31 T 23-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VV93_RS09535 d701e32bcf642b98f0672ec43506b221 181 Pfam PF05951 Bacterial protein of unknown function (DUF882) 33 181 2.8E-72 T 23-04-2016 IPR010275 Protein of unknown function DUF882 VV93_RS09535 d701e32bcf642b98f0672ec43506b221 181 SUPERFAMILY SSF55166 64 181 1.78E-34 T 23-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VV93_RS09535 d701e32bcf642b98f0672ec43506b221 181 PANTHER PTHR37425 5 181 4.1E-61 T 23-04-2016 VV93_RS12820 3feada755a163520cca481429e428f28 137 SUPERFAMILY SSF53850 13 125 2.44E-8 T 23-04-2016 VV93_RS06085 37939cc8974362e84854d3f9c53751d6 213 PIRSF PIRSF015617 18 213 1.6E-64 T 23-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VV93_RS06085 37939cc8974362e84854d3f9c53751d6 213 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 41 213 6.4E-68 T 23-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VV93_RS06085 37939cc8974362e84854d3f9c53751d6 213 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 44 213 7.8E-58 T 23-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VV93_RS06085 37939cc8974362e84854d3f9c53751d6 213 Gene3D G3DSA:3.40.50.300 20 213 3.6E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06085 37939cc8974362e84854d3f9c53751d6 213 PANTHER PTHR30069 5 213 8.3E-63 T 23-04-2016 VV93_RS06085 37939cc8974362e84854d3f9c53751d6 213 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 16 38 5.9E-7 T 23-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VV93_RS06085 37939cc8974362e84854d3f9c53751d6 213 SUPERFAMILY SSF52540 24 213 2.05E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS19780 de5e863124d106774981a5373953fa67 321 Gene3D G3DSA:1.10.230.10 228 320 1.1E-44 T 23-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain VV93_RS19780 de5e863124d106774981a5373953fa67 321 SUPERFAMILY SSF48256 1 321 1.44E-134 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS19780 de5e863124d106774981a5373953fa67 321 Gene3D G3DSA:1.10.580.10 1 227 4.2E-99 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 VV93_RS19780 de5e863124d106774981a5373953fa67 321 ProSitePatterns PS00480 Citrate synthase signature. 250 262 - T 23-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 VV93_RS19780 de5e863124d106774981a5373953fa67 321 Pfam PF00285 Citrate synthase, C-terminal domain 1 321 4.1E-115 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS19780 de5e863124d106774981a5373953fa67 321 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 1 321 2.2E-191 T 23-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 VV93_RS19780 de5e863124d106774981a5373953fa67 321 PANTHER PTHR11739 1 321 4.2E-172 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS19780 de5e863124d106774981a5373953fa67 321 PANTHER PTHR11739:SF8 1 321 4.2E-172 T 23-04-2016 VV93_RS19780 de5e863124d106774981a5373953fa67 321 PIRSF PIRSF001369 1 321 8.5E-142 T 23-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 VV93_RS19780 de5e863124d106774981a5373953fa67 321 PRINTS PR00143 Citrate synthase signature 188 216 4.3E-46 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS19780 de5e863124d106774981a5373953fa67 321 PRINTS PR00143 Citrate synthase signature 166 181 4.3E-46 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS19780 de5e863124d106774981a5373953fa67 321 PRINTS PR00143 Citrate synthase signature 306 321 4.3E-46 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS19780 de5e863124d106774981a5373953fa67 321 PRINTS PR00143 Citrate synthase signature 243 263 4.3E-46 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS19780 de5e863124d106774981a5373953fa67 321 PRINTS PR00143 Citrate synthase signature 112 125 4.3E-46 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 VV93_RS02440 a16b41d00c4a7a2c3527e18a7ade84df 238 PIRSF PIRSF029033 1 238 1.7E-101 T 23-04-2016 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein VV93_RS02440 a16b41d00c4a7a2c3527e18a7ade84df 238 Pfam PF04402 Protein of unknown function (DUF541) 41 211 6.2E-16 T 23-04-2016 IPR007497 Protein of unknown function DUF541 VV93_RS03155 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 166 187 7.1E-76 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VV93_RS03155 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 54 70 7.1E-76 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VV93_RS03155 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 35 54 7.1E-76 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VV93_RS03155 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 268 294 7.1E-76 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VV93_RS03155 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 418 435 7.1E-76 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VV93_RS03155 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 142 166 7.1E-76 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VV93_RS03155 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 366 385 7.1E-76 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VV93_RS03155 8443436d5a92da9e48f5475b815c0ee0 520 PANTHER PTHR11206:SF90 69 84 1.4E-96 T 23-04-2016 VV93_RS03155 8443436d5a92da9e48f5475b815c0ee0 520 PANTHER PTHR11206 69 84 1.4E-96 T 23-04-2016 VV93_RS03155 8443436d5a92da9e48f5475b815c0ee0 520 PANTHER PTHR11206 226 502 1.4E-96 T 23-04-2016 VV93_RS03155 8443436d5a92da9e48f5475b815c0ee0 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 512 9.8E-134 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VV93_RS03155 8443436d5a92da9e48f5475b815c0ee0 520 PANTHER PTHR11206:SF90 226 502 1.4E-96 T 23-04-2016 VV93_RS03155 8443436d5a92da9e48f5475b815c0ee0 520 PIRSF PIRSF002869 1 518 2.1E-150 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VV93_RS03155 8443436d5a92da9e48f5475b815c0ee0 520 Pfam PF03023 MviN-like protein 30 475 6.6E-141 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VV93_RS03760 0467ec7c0b56ee76ae2338257e385a63 250 Pfam PF11726 Protein of unknown function (DUF3296) 46 225 4.9E-42 T 23-04-2016 IPR021723 Inovirus Gp2 VV93_RS08710 f99f1dcbbef15684baa676ba2a9189c5 336 PANTHER PTHR11358 7 331 4.5E-126 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VV93_RS08710 f99f1dcbbef15684baa676ba2a9189c5 336 PIRSF PIRSF036979 25 333 6.9E-25 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VV93_RS08710 f99f1dcbbef15684baa676ba2a9189c5 336 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 327 44.541 T 23-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 VV93_RS08710 f99f1dcbbef15684baa676ba2a9189c5 336 ProSitePatterns PS01053 Arginase family signature. 255 276 - T 23-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 VV93_RS08710 f99f1dcbbef15684baa676ba2a9189c5 336 PANTHER PTHR11358:SF35 7 331 4.5E-126 T 23-04-2016 VV93_RS08710 f99f1dcbbef15684baa676ba2a9189c5 336 SUPERFAMILY SSF52768 13 330 1.03E-84 T 23-04-2016 VV93_RS08710 f99f1dcbbef15684baa676ba2a9189c5 336 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 327 2.9E-116 T 23-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 VV93_RS08710 f99f1dcbbef15684baa676ba2a9189c5 336 PRINTS PR00116 Arginase signature 252 281 1.6E-5 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VV93_RS08710 f99f1dcbbef15684baa676ba2a9189c5 336 PRINTS PR00116 Arginase signature 125 140 1.6E-5 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VV93_RS08710 f99f1dcbbef15684baa676ba2a9189c5 336 Pfam PF00491 Arginase family 46 325 9.6E-62 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VV93_RS08710 f99f1dcbbef15684baa676ba2a9189c5 336 Gene3D G3DSA:3.40.800.10 8 331 8.8E-112 T 23-04-2016 IPR023696 Ureohydrolase domain VV93_RS02920 987014e0b1c5a6eb083f8ac8ad5e05f7 142 Pfam PF07386 Protein of unknown function (DUF1499) 30 133 4.4E-23 T 23-04-2016 IPR010865 Protein of unknown function DUF1499 VV93_RS02920 987014e0b1c5a6eb083f8ac8ad5e05f7 142 PIRSF PIRSF026426 1 142 2.9E-50 T 23-04-2016 IPR010865 Protein of unknown function DUF1499 VV93_RS02920 987014e0b1c5a6eb083f8ac8ad5e05f7 142 PANTHER PTHR34801:SF2 1 140 4.1E-36 T 23-04-2016 VV93_RS02920 987014e0b1c5a6eb083f8ac8ad5e05f7 142 PANTHER PTHR34801 1 140 4.1E-36 T 23-04-2016 VV93_RS11990 a57fb2649f22855f79daceadb29c35ae 248 SMART SM00858 44 106 3.6E-7 T 23-04-2016 IPR013974 SAF domain VV93_RS11990 a57fb2649f22855f79daceadb29c35ae 248 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 225 3.0E-74 T 23-04-2016 IPR017592 Pilus assembly, Flp-type CpaB VV93_RS11990 a57fb2649f22855f79daceadb29c35ae 248 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 113 215 4.3E-29 T 23-04-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain VV93_RS11990 a57fb2649f22855f79daceadb29c35ae 248 Pfam PF08666 SAF domain 45 105 1.0E-7 T 23-04-2016 IPR013974 SAF domain VV93_RS03775 c16d398435becc69fac219bd302b9b38 148 Gene3D G3DSA:3.30.420.10 3 145 3.1E-37 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS03775 c16d398435becc69fac219bd302b9b38 148 SUPERFAMILY SSF53098 3 144 3.79E-34 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VV93_RS03775 c16d398435becc69fac219bd302b9b38 148 PANTHER PTHR10642 2 144 3.8E-32 T 23-04-2016 VV93_RS03775 c16d398435becc69fac219bd302b9b38 148 Pfam PF00075 RNase H 3 143 1.6E-27 T 23-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VV93_RS12545 7c8ddeca9d463fe8f8fb6589fc760acb 190 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 27 169 1.7E-22 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VV93_RS12545 7c8ddeca9d463fe8f8fb6589fc760acb 190 Gene3D G3DSA:3.40.80.10 5 182 1.5E-66 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VV93_RS12545 7c8ddeca9d463fe8f8fb6589fc760acb 190 PANTHER PTHR30417 4 183 7.2E-82 T 23-04-2016 VV93_RS12545 7c8ddeca9d463fe8f8fb6589fc760acb 190 SMART SM00644 18 169 2.6E-58 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VV93_RS12545 7c8ddeca9d463fe8f8fb6589fc760acb 190 PANTHER PTHR30417:SF4 4 183 7.2E-82 T 23-04-2016 VV93_RS12545 7c8ddeca9d463fe8f8fb6589fc760acb 190 SUPERFAMILY SSF55846 5 181 1.15E-66 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VV93_RS01790 a82fb5af78f5c385fa9d3acf1a5ef316 1517 PANTHER PTHR15730 905 1391 3.3E-300 T 23-04-2016 VV93_RS01790 a82fb5af78f5c385fa9d3acf1a5ef316 1517 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 1077 1469 6.4E-57 T 23-04-2016 IPR031161 Peptidase family M60 domain VV93_RS01790 a82fb5af78f5c385fa9d3acf1a5ef316 1517 Pfam PF13322 Domain of unknown function (DUF4092) 383 556 1.5E-91 T 23-04-2016 IPR025385 Domain of unknown function DUF4092 VV93_RS01790 a82fb5af78f5c385fa9d3acf1a5ef316 1517 PANTHER PTHR15730:SF7 905 1391 3.3E-300 T 23-04-2016 VV93_RS01790 a82fb5af78f5c385fa9d3acf1a5ef316 1517 PANTHER PTHR15730:SF7 1411 1517 3.3E-300 T 23-04-2016 VV93_RS01790 a82fb5af78f5c385fa9d3acf1a5ef316 1517 SMART SM01276 1083 1386 4.9E-88 T 23-04-2016 IPR031161 Peptidase family M60 domain VV93_RS01790 a82fb5af78f5c385fa9d3acf1a5ef316 1517 PANTHER PTHR15730 1411 1517 3.3E-300 T 23-04-2016 VV93_RS09350 6980c1a7a5f48fb812f549879fe0cc7e 458 PIRSF PIRSF019381 1 458 3.3E-198 T 23-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein VV93_RS09350 6980c1a7a5f48fb812f549879fe0cc7e 458 Pfam PF04317 YcjX-like family, DUF463 20 457 8.4E-187 T 23-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein VV93_RS09350 6980c1a7a5f48fb812f549879fe0cc7e 458 Gene3D G3DSA:3.40.50.300 263 350 8.4E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09350 6980c1a7a5f48fb812f549879fe0cc7e 458 Gene3D G3DSA:3.40.50.300 16 47 8.4E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS09350 6980c1a7a5f48fb812f549879fe0cc7e 458 PANTHER PTHR38605:SF1 1 458 1.1E-222 T 23-04-2016 VV93_RS09350 6980c1a7a5f48fb812f549879fe0cc7e 458 PANTHER PTHR38605 1 458 1.1E-222 T 23-04-2016 VV93_RS12215 b0efab3a0c141ef5c730bf3bb9c8cfba 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 118 21.07 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VV93_RS12215 b0efab3a0c141ef5c730bf3bb9c8cfba 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 23-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 VV93_RS12215 b0efab3a0c141ef5c730bf3bb9c8cfba 131 Pfam PF02033 Ribosome-binding factor A 7 110 1.1E-29 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VV93_RS12215 b0efab3a0c141ef5c730bf3bb9c8cfba 131 SUPERFAMILY SSF89919 2 105 1.31E-31 T 23-04-2016 IPR023799 Ribosome-binding factor A domain VV93_RS12215 b0efab3a0c141ef5c730bf3bb9c8cfba 131 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 5.2E-35 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VV93_RS12215 b0efab3a0c141ef5c730bf3bb9c8cfba 131 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 3.0E-47 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VV93_RS12215 b0efab3a0c141ef5c730bf3bb9c8cfba 131 PANTHER PTHR33515 1 131 1.7E-46 T 23-04-2016 VV93_RS12215 b0efab3a0c141ef5c730bf3bb9c8cfba 131 Gene3D G3DSA:3.30.300.20 2 105 2.9E-36 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta VV93_RS05025 6f941cf8ecd23e71c31a095abc75e1bf 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.5E-109 T 23-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 VV93_RS05025 6f941cf8ecd23e71c31a095abc75e1bf 270 Gene3D G3DSA:3.40.50.300 1 248 1.9E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05025 6f941cf8ecd23e71c31a095abc75e1bf 270 PIRSF PIRSF003092 1 270 3.4E-94 T 23-04-2016 IPR025501 ATP binding protein MinD VV93_RS05025 6f941cf8ecd23e71c31a095abc75e1bf 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 6.9E-27 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VV93_RS05025 6f941cf8ecd23e71c31a095abc75e1bf 270 PANTHER PTHR13696:SF1 1 258 2.2E-90 T 23-04-2016 VV93_RS05025 6f941cf8ecd23e71c31a095abc75e1bf 270 SUPERFAMILY SSF52540 1 268 1.01E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05025 6f941cf8ecd23e71c31a095abc75e1bf 270 PANTHER PTHR13696 1 258 2.2E-90 T 23-04-2016 VV93_RS07625 ffaed7d8ee619e43a3b05861816b35d3 409 Pfam PF13641 Glycosyltransferase like family 2 66 286 1.2E-15 T 23-04-2016 VV93_RS07625 ffaed7d8ee619e43a3b05861816b35d3 409 Gene3D G3DSA:3.90.550.10 66 273 4.2E-15 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS07625 ffaed7d8ee619e43a3b05861816b35d3 409 PANTHER PTHR22916 64 353 2.1E-13 T 23-04-2016 VV93_RS07625 ffaed7d8ee619e43a3b05861816b35d3 409 SUPERFAMILY SSF53448 56 330 5.91E-29 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS04440 a056b07319c48859e99eee69740ccd9d 269 PANTHER PTHR31350 33 252 5.4E-47 T 23-04-2016 VV93_RS04440 a056b07319c48859e99eee69740ccd9d 269 SUPERFAMILY SSF48452 190 263 6.78E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS04440 a056b07319c48859e99eee69740ccd9d 269 Gene3D G3DSA:1.25.40.10 183 251 3.5E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS04440 a056b07319c48859e99eee69740ccd9d 269 Gene3D G3DSA:1.25.40.10 22 48 3.5E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS04440 a056b07319c48859e99eee69740ccd9d 269 Pfam PF13371 Tetratricopeptide repeat 187 259 2.6E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS04440 a056b07319c48859e99eee69740ccd9d 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 4.0E-44 T 23-04-2016 IPR032698 Protein SirB1, N-terminal VV93_RS07125 441176de1cbbc6601c65229cbb54c0e7 186 Pfam PF07209 Protein of unknown function (DUF1415) 10 178 1.1E-65 T 23-04-2016 IPR009858 Protein of unknown function DUF1415 VV93_RS10055 da8ba56b3830ce7a3db2ceaf1470200d 146 PANTHER PTHR30558 4 144 4.2E-55 T 23-04-2016 VV93_RS10055 da8ba56b3830ce7a3db2ceaf1470200d 146 PANTHER PTHR30558:SF7 4 144 4.2E-55 T 23-04-2016 VV93_RS10055 da8ba56b3830ce7a3db2ceaf1470200d 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 5.0E-25 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 VV93_RS02675 5ac6232e3831bf1fe6ef917be26b2b6a 211 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VV93_RS02675 5ac6232e3831bf1fe6ef917be26b2b6a 211 Pfam PF00293 NUDIX domain 59 201 1.5E-10 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VV93_RS02675 5ac6232e3831bf1fe6ef917be26b2b6a 211 Gene3D G3DSA:3.90.79.10 14 200 3.2E-52 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS02675 5ac6232e3831bf1fe6ef917be26b2b6a 211 PANTHER PTHR11839 1 207 2.2E-104 T 23-04-2016 VV93_RS02675 5ac6232e3831bf1fe6ef917be26b2b6a 211 SUPERFAMILY SSF55811 11 206 7.99E-45 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VV93_RS02675 5ac6232e3831bf1fe6ef917be26b2b6a 211 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 198 1.2E-60 T 23-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 VV93_RS02675 5ac6232e3831bf1fe6ef917be26b2b6a 211 PANTHER PTHR11839:SF5 1 207 2.2E-104 T 23-04-2016 VV93_RS14040 4289703cf5f9c13d4235a459a17165ac 260 Gene3D G3DSA:1.10.287.460 40 140 6.3E-37 T 23-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VV93_RS14040 4289703cf5f9c13d4235a459a17165ac 260 Gene3D G3DSA:3.10.50.40 141 255 3.8E-47 T 23-04-2016 VV93_RS14040 4289703cf5f9c13d4235a459a17165ac 260 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 251 4.5E-30 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VV93_RS14040 4289703cf5f9c13d4235a459a17165ac 260 PANTHER PTHR10516 134 256 3.4E-54 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VV93_RS14040 4289703cf5f9c13d4235a459a17165ac 260 SUPERFAMILY SSF54534 48 253 1.19E-64 T 23-04-2016 VV93_RS14040 4289703cf5f9c13d4235a459a17165ac 260 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 37 157 1.5E-33 T 23-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VV93_RS10385 bcbda3524f11dea8b56971b39bd24687 326 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 28 323 3.3E-86 T 23-04-2016 IPR018707 Protein of unknown function DUF2219 VV93_RS10385 bcbda3524f11dea8b56971b39bd24687 326 Gene3D G3DSA:2.40.128.140 9 322 4.4E-97 T 23-04-2016 VV93_RS08825 e0bf994eef1981dc92ba14392d655915 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 1.9E-25 T 23-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VV93_RS08825 e0bf994eef1981dc92ba14392d655915 327 SUPERFAMILY SSF55681 92 327 3.65E-83 T 23-04-2016 VV93_RS08825 e0bf994eef1981dc92ba14392d655915 327 SUPERFAMILY SSF46589 14 99 2.51E-22 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 VV93_RS08825 e0bf994eef1981dc92ba14392d655915 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 7.6E-107 T 23-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 VV93_RS08825 e0bf994eef1981dc92ba14392d655915 327 PANTHER PTHR11538 92 327 1.0E-115 T 23-04-2016 VV93_RS08825 e0bf994eef1981dc92ba14392d655915 327 Gene3D G3DSA:3.30.930.10 10 327 8.7E-134 T 23-04-2016 VV93_RS08825 e0bf994eef1981dc92ba14392d655915 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 3.9E-112 T 23-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VV93_RS08825 e0bf994eef1981dc92ba14392d655915 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.282 T 23-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 VV93_RS02475 16b6f75cf9b1274637abc693c0946fa0 343 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 7 342 8.2E-136 T 23-04-2016 IPR013399 CRISPR-associated protein Csy3 VV93_RS02475 16b6f75cf9b1274637abc693c0946fa0 343 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 7 339 1.8E-147 T 23-04-2016 IPR013399 CRISPR-associated protein Csy3 VV93_RS09480 130098a50f82c3dcedf9baf10673cfcc 627 Pfam PF02743 Cache domain 43 258 7.3E-30 T 23-04-2016 IPR033479 Double Cache domain 1 VV93_RS09480 130098a50f82c3dcedf9baf10673cfcc 627 Pfam PF00672 HAMP domain 278 346 3.5E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS09480 130098a50f82c3dcedf9baf10673cfcc 627 SUPERFAMILY SSF103190 89 175 1.96E-11 T 23-04-2016 IPR029151 Periplasmic sensor domain-like VV93_RS09480 130098a50f82c3dcedf9baf10673cfcc 627 Gene3D G3DSA:3.30.450.20 134 274 1.5E-28 T 23-04-2016 VV93_RS09480 130098a50f82c3dcedf9baf10673cfcc 627 PANTHER PTHR32089:SF59 1 627 2.6E-293 T 23-04-2016 VV93_RS09480 130098a50f82c3dcedf9baf10673cfcc 627 PANTHER PTHR32089 1 627 2.6E-293 T 23-04-2016 VV93_RS09480 130098a50f82c3dcedf9baf10673cfcc 627 SMART SM00283 365 626 9.9E-64 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS09480 130098a50f82c3dcedf9baf10673cfcc 627 SMART SM00304 296 350 6.3E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS09480 130098a50f82c3dcedf9baf10673cfcc 627 SMART SM00304 353 403 3.3 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VV93_RS09480 130098a50f82c3dcedf9baf10673cfcc 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 430 625 4.1E-46 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS09480 130098a50f82c3dcedf9baf10673cfcc 627 SUPERFAMILY SSF58104 318 627 3.4E-76 T 23-04-2016 VV93_RS09480 130098a50f82c3dcedf9baf10673cfcc 627 Gene3D G3DSA:1.10.287.950 380 597 1.8E-55 T 23-04-2016 VV93_RS21575 26cee7fba1e7ddf06a2ea1a9f4ee1653 177 PANTHER PTHR10110 5 177 6.2E-69 T 23-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 VV93_RS21575 26cee7fba1e7ddf06a2ea1a9f4ee1653 177 PANTHER PTHR10110:SF86 5 177 6.2E-69 T 23-04-2016 VV93_RS21575 26cee7fba1e7ddf06a2ea1a9f4ee1653 177 Pfam PF00999 Sodium/hydrogen exchanger family 5 173 7.6E-32 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VV93_RS06790 0fb55bba50fb54ea033f70d256bd231a 82 PANTHER PTHR35175:SF1 1 82 1.8E-39 T 23-04-2016 VV93_RS06790 0fb55bba50fb54ea033f70d256bd231a 82 PANTHER PTHR35175 1 82 1.8E-39 T 23-04-2016 VV93_RS06790 0fb55bba50fb54ea033f70d256bd231a 82 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 2.2E-18 T 23-04-2016 IPR010710 Protein of unknown function DUF1289 VV93_RS01350 3d0db315d583b75c5f10f07fe3ee9861 860 SUPERFAMILY SSF52540 253 308 1.82E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01350 3d0db315d583b75c5f10f07fe3ee9861 860 SUPERFAMILY SSF52540 344 411 1.82E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01350 3d0db315d583b75c5f10f07fe3ee9861 860 SUPERFAMILY SSF52540 149 226 1.82E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01350 3d0db315d583b75c5f10f07fe3ee9861 860 SUPERFAMILY SSF52540 36 92 1.82E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01350 3d0db315d583b75c5f10f07fe3ee9861 860 Gene3D G3DSA:3.40.50.300 179 231 4.6E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01350 3d0db315d583b75c5f10f07fe3ee9861 860 Gene3D G3DSA:3.40.50.300 2 144 4.6E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01350 3d0db315d583b75c5f10f07fe3ee9861 860 Pfam PF00271 Helicase conserved C-terminal domain 369 411 2.1E-4 T 23-04-2016 IPR001650 Helicase, C-terminal VV93_RS01350 3d0db315d583b75c5f10f07fe3ee9861 860 Pfam PF04851 Type III restriction enzyme, res subunit 2 224 3.0E-12 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VV93_RS03380 a6be3262656f772d4e46e35e2723ecb7 276 SUPERFAMILY SSF55166 23 273 7.22E-93 T 23-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VV93_RS03380 a6be3262656f772d4e46e35e2723ecb7 276 PIRSF PIRSF018455 1 276 3.0E-112 T 23-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 VV93_RS03380 a6be3262656f772d4e46e35e2723ecb7 276 Pfam PF03411 Penicillin-insensitive murein endopeptidase 38 271 1.3E-90 T 23-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 VV93_RS03380 a6be3262656f772d4e46e35e2723ecb7 276 Gene3D G3DSA:3.30.1380.10 24 273 4.0E-93 T 23-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VV93_RS10100 cccda36d6d641fd3383938803edc0952 486 Gene3D G3DSA:1.10.287.950 246 452 1.5E-41 T 23-04-2016 VV93_RS10100 cccda36d6d641fd3383938803edc0952 486 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 307 481 2.1E-33 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS10100 cccda36d6d641fd3383938803edc0952 486 SUPERFAMILY SSF58104 241 481 2.88E-42 T 23-04-2016 VV93_RS10100 cccda36d6d641fd3383938803edc0952 486 PANTHER PTHR32089 53 60 8.8E-38 T 23-04-2016 VV93_RS10100 cccda36d6d641fd3383938803edc0952 486 PANTHER PTHR32089 233 484 8.8E-38 T 23-04-2016 VV93_RS10100 cccda36d6d641fd3383938803edc0952 486 SMART SM00283 223 477 4.5E-28 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VV93_RS11945 bdbb094e65bf66e64635af8d94f1887f 314 PANTHER PTHR35007:SF2 9 314 1.5E-60 T 23-04-2016 VV93_RS11945 bdbb094e65bf66e64635af8d94f1887f 314 PANTHER PTHR35007 9 314 1.5E-60 T 23-04-2016 VV93_RS11945 bdbb094e65bf66e64635af8d94f1887f 314 Pfam PF00482 Type II secretion system (T2SS), protein F 174 302 5.6E-23 T 23-04-2016 IPR018076 Type II secretion system F domain VV93_RS08995 228e8c84888ad6d6df9f5bcdf47e5f04 435 SUPERFAMILY SSF52540 60 366 1.76E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08995 228e8c84888ad6d6df9f5bcdf47e5f04 435 PANTHER PTHR30258 19 392 4.0E-124 T 23-04-2016 VV93_RS08995 228e8c84888ad6d6df9f5bcdf47e5f04 435 PANTHER PTHR30258:SF3 19 392 4.0E-124 T 23-04-2016 VV93_RS08995 228e8c84888ad6d6df9f5bcdf47e5f04 435 Gene3D G3DSA:3.30.450.90 80 177 1.6E-35 T 23-04-2016 VV93_RS08995 228e8c84888ad6d6df9f5bcdf47e5f04 435 Pfam PF00437 Type II/IV secretion system protein 84 360 8.7E-84 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VV93_RS08995 228e8c84888ad6d6df9f5bcdf47e5f04 435 Gene3D G3DSA:3.40.50.300 183 392 2.8E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS12285 fae8210296ee498cdbf33715afab4829 340 PANTHER PTHR34501 2 340 5.5E-87 T 23-04-2016 VV93_RS12285 fae8210296ee498cdbf33715afab4829 340 Pfam PF13609 Gram-negative porin 10 309 9.7E-28 T 23-04-2016 VV93_RS12285 fae8210296ee498cdbf33715afab4829 340 PANTHER PTHR34501:SF2 2 340 5.5E-87 T 23-04-2016 VV93_RS12285 fae8210296ee498cdbf33715afab4829 340 SUPERFAMILY SSF56935 22 340 1.07E-52 T 23-04-2016 VV93_RS12285 fae8210296ee498cdbf33715afab4829 340 Gene3D G3DSA:2.40.160.10 22 340 3.5E-58 T 23-04-2016 IPR023614 Porin domain VV93_RS13960 68f28a7c554211fa67ad1a6200cd7aa8 208 PANTHER PTHR30363 1 202 2.4E-97 T 23-04-2016 VV93_RS13960 68f28a7c554211fa67ad1a6200cd7aa8 208 Gene3D G3DSA:1.10.10.10 6 99 6.7E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS13960 68f28a7c554211fa67ad1a6200cd7aa8 208 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 2.5E-6 T 23-04-2016 VV93_RS13960 68f28a7c554211fa67ad1a6200cd7aa8 208 PANTHER PTHR30363:SF9 1 202 2.4E-97 T 23-04-2016 VV93_RS13960 68f28a7c554211fa67ad1a6200cd7aa8 208 SUPERFAMILY SSF46785 6 183 1.44E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS13220 91efb21cba71b4c19ef77eaaa7ff986b 135 PANTHER PTHR33990:SF1 1 131 5.9E-36 T 23-04-2016 VV93_RS13220 91efb21cba71b4c19ef77eaaa7ff986b 135 PANTHER PTHR33990 1 131 5.9E-36 T 23-04-2016 VV93_RS13220 91efb21cba71b4c19ef77eaaa7ff986b 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 129 5.4E-10 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV93_RS13220 91efb21cba71b4c19ef77eaaa7ff986b 135 SUPERFAMILY SSF54593 1 131 5.19E-32 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS13220 91efb21cba71b4c19ef77eaaa7ff986b 135 Gene3D G3DSA:3.10.180.10 8 132 3.4E-38 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS12090 d5d2a042bce961253fdea37ddfb2c015 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 53.676 T 23-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VV93_RS12090 d5d2a042bce961253fdea37ddfb2c015 406 PANTHER PTHR21110:SF0 2 406 1.4E-158 T 23-04-2016 VV93_RS12090 d5d2a042bce961253fdea37ddfb2c015 406 SUPERFAMILY SSF143856 118 234 3.66E-47 T 23-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VV93_RS12090 d5d2a042bce961253fdea37ddfb2c015 406 PIRSF PIRSF001491 1 406 1.9E-160 T 23-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VV93_RS12090 d5d2a042bce961253fdea37ddfb2c015 406 Gene3D G3DSA:3.30.70.1250 115 234 6.3E-50 T 23-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VV93_RS12090 d5d2a042bce961253fdea37ddfb2c015 406 Gene3D G3DSA:3.40.720.10 239 406 3.1E-72 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VV93_RS12090 d5d2a042bce961253fdea37ddfb2c015 406 Gene3D G3DSA:3.40.720.10 1 114 3.1E-72 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VV93_RS12090 d5d2a042bce961253fdea37ddfb2c015 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 3.2E-176 T 23-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VV93_RS12090 d5d2a042bce961253fdea37ddfb2c015 406 PANTHER PTHR21110 2 406 1.4E-158 T 23-04-2016 VV93_RS12090 d5d2a042bce961253fdea37ddfb2c015 406 SUPERFAMILY SSF53649 1 115 1.05E-68 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VV93_RS12090 d5d2a042bce961253fdea37ddfb2c015 406 SUPERFAMILY SSF53649 236 406 1.05E-68 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VV93_RS12090 d5d2a042bce961253fdea37ddfb2c015 406 Pfam PF01676 Metalloenzyme superfamily 2 397 5.5E-43 T 23-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VV93_RS04100 03fe7394b625bb55505f5f5914148b96 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 1.5E-21 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VV93_RS04100 03fe7394b625bb55505f5f5914148b96 253 PANTHER PTHR30433 2 250 1.9E-127 T 23-04-2016 VV93_RS04100 03fe7394b625bb55505f5f5914148b96 253 PANTHER PTHR30433:SF2 2 250 1.9E-127 T 23-04-2016 IPR022522 Flagellar motor stator, MotA VV93_RS04100 03fe7394b625bb55505f5f5914148b96 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 23-04-2016 IPR000540 Flagellar motor protein MotA, conserved site VV93_RS04065 faeacaab3881840c69707ebb87565b96 156 PANTHER PTHR21058 1 155 1.1E-77 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS04065 faeacaab3881840c69707ebb87565b96 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 3.5E-54 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS04065 faeacaab3881840c69707ebb87565b96 156 SUPERFAMILY SSF52121 4 154 1.03E-59 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS04065 faeacaab3881840c69707ebb87565b96 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.189 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS04065 faeacaab3881840c69707ebb87565b96 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.4E-55 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS04065 faeacaab3881840c69707ebb87565b96 156 Gene3D G3DSA:3.40.50.960 3 154 1.3E-64 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VV93_RS08785 400edb7f8ba47d6e6207b9f56df99305 258 Gene3D G3DSA:3.30.460.10 106 190 2.8E-5 T 23-04-2016 VV93_RS08785 400edb7f8ba47d6e6207b9f56df99305 258 SUPERFAMILY SSF81301 64 221 1.8E-16 T 23-04-2016 VV93_RS08785 400edb7f8ba47d6e6207b9f56df99305 258 Pfam PF04607 Region found in RelA / SpoT proteins 105 196 2.7E-4 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 VV93_RS08785 400edb7f8ba47d6e6207b9f56df99305 258 SMART SM00954 103 211 0.0083 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 VV93_RS01705 5028a8fc7eb7281684e9eff57be3c4c1 166 PANTHER PTHR23416 41 130 2.2E-30 T 23-04-2016 VV93_RS01705 5028a8fc7eb7281684e9eff57be3c4c1 166 Gene3D G3DSA:2.160.10.10 38 133 3.5E-33 T 23-04-2016 VV93_RS01705 5028a8fc7eb7281684e9eff57be3c4c1 166 SUPERFAMILY SSF51161 40 145 1.52E-33 T 23-04-2016 IPR011004 Trimeric LpxA-like VV93_RS01705 5028a8fc7eb7281684e9eff57be3c4c1 166 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 80 113 2.5E-11 T 23-04-2016 IPR001451 Hexapeptide repeat VV93_RS10615 b4e1945d7b5b4872074e426494977d90 274 PANTHER PTHR10108:SF886 16 202 7.8E-41 T 23-04-2016 VV93_RS10615 b4e1945d7b5b4872074e426494977d90 274 Pfam PF13847 Methyltransferase domain 88 225 2.6E-13 T 23-04-2016 IPR025714 Methyltransferase domain VV93_RS10615 b4e1945d7b5b4872074e426494977d90 274 Gene3D G3DSA:3.40.50.150 63 208 2.0E-21 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS10615 b4e1945d7b5b4872074e426494977d90 274 PIRSF PIRSF018249 1 273 5.5E-85 T 23-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 VV93_RS10615 b4e1945d7b5b4872074e426494977d90 274 PANTHER PTHR10108 16 202 7.8E-41 T 23-04-2016 VV93_RS10615 b4e1945d7b5b4872074e426494977d90 274 SUPERFAMILY SSF53335 4 258 7.7E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00195 9f9753db9d10d442f56be527e4341c4a 193 SUPERFAMILY SSF46689 6 81 6.98E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS00195 9f9753db9d10d442f56be527e4341c4a 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VV93_RS00195 9f9753db9d10d442f56be527e4341c4a 193 Gene3D G3DSA:1.10.357.10 4 190 3.7E-33 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VV93_RS00195 9f9753db9d10d442f56be527e4341c4a 193 PANTHER PTHR30055:SF82 1 190 3.9E-59 T 23-04-2016 VV93_RS00195 9f9753db9d10d442f56be527e4341c4a 193 PANTHER PTHR30055 1 190 3.9E-59 T 23-04-2016 VV93_RS00195 9f9753db9d10d442f56be527e4341c4a 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.7E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV93_RS00195 9f9753db9d10d442f56be527e4341c4a 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.7E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV93_RS00195 9f9753db9d10d442f56be527e4341c4a 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 5.0E-18 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV93_RS11760 7650205fc56aa4cbdb198fc7d98a09ea 607 PANTHER PTHR10342:SF235 222 566 1.7E-105 T 23-04-2016 VV93_RS11760 7650205fc56aa4cbdb198fc7d98a09ea 607 Gene3D G3DSA:3.40.720.10 250 522 1.1E-35 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VV93_RS11760 7650205fc56aa4cbdb198fc7d98a09ea 607 PANTHER PTHR10342 222 566 1.7E-105 T 23-04-2016 VV93_RS11760 7650205fc56aa4cbdb198fc7d98a09ea 607 Pfam PF00884 Sulfatase 250 521 2.0E-32 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VV93_RS11760 7650205fc56aa4cbdb198fc7d98a09ea 607 SUPERFAMILY SSF53649 246 571 1.23E-55 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VV93_RS11760 7650205fc56aa4cbdb198fc7d98a09ea 607 PIRSF PIRSF004950 1 606 1.1E-233 T 23-04-2016 IPR012159 Inner membrane protein YejM VV93_RS11760 7650205fc56aa4cbdb198fc7d98a09ea 607 Pfam PF11893 Domain of unknown function (DUF3413) 2 242 1.6E-58 T 23-04-2016 IPR024588 Inner membrane protein YejM, N-terminal VV93_RS10215 2189dfa501854efd58f7588ea4b09376 225 Pfam PF09335 SNARE associated Golgi protein 66 181 2.8E-23 T 23-04-2016 IPR032816 SNARE associated Golgi protein VV93_RS10215 2189dfa501854efd58f7588ea4b09376 225 PANTHER PTHR12677 5 219 1.6E-44 T 23-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 VV93_RS09850 62cb69740aeb69fe773c74dee1f622b0 243 Pfam PF11859 Protein of unknown function (DUF3379) 1 239 2.6E-83 T 23-04-2016 IPR021806 Protein of unknown function DUF3379 VV93_RS11570 8d4df89d7fda3a1c8259da9050d3a4bd 63 Pfam PF14056 Domain of unknown function (DUF4250) 8 62 6.4E-21 T 23-04-2016 IPR025346 Protein of unknown function DUF4250 VV93_RS08480 5b35c0da2665c0fb6e10f0a7c99ed59a 179 Pfam PF01202 Shikimate kinase 12 44 1.0E-4 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VV93_RS08480 5b35c0da2665c0fb6e10f0a7c99ed59a 179 Gene3D G3DSA:3.40.50.300 3 115 4.2E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08480 5b35c0da2665c0fb6e10f0a7c99ed59a 179 PANTHER PTHR37816:SF1 4 178 8.0E-31 T 23-04-2016 VV93_RS08480 5b35c0da2665c0fb6e10f0a7c99ed59a 179 SUPERFAMILY SSF52540 129 156 3.13E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08480 5b35c0da2665c0fb6e10f0a7c99ed59a 179 SUPERFAMILY SSF52540 3 101 3.13E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08480 5b35c0da2665c0fb6e10f0a7c99ed59a 179 PANTHER PTHR37816 4 178 8.0E-31 T 23-04-2016 VV93_RS07575 4b9779127d0822fcc2984119f0f2828b 228 SUPERFAMILY SSF52172 5 135 1.39E-32 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS07575 4b9779127d0822fcc2984119f0f2828b 228 Gene3D G3DSA:3.40.50.2300 3 125 1.9E-28 T 23-04-2016 VV93_RS07575 4b9779127d0822fcc2984119f0f2828b 228 PANTHER PTHR26402:SF522 5 138 3.1E-42 T 23-04-2016 VV93_RS07575 4b9779127d0822fcc2984119f0f2828b 228 PANTHER PTHR26402:SF522 204 222 3.1E-42 T 23-04-2016 VV93_RS07575 4b9779127d0822fcc2984119f0f2828b 228 Pfam PF00072 Response regulator receiver domain 7 118 2.0E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS07575 4b9779127d0822fcc2984119f0f2828b 228 PANTHER PTHR26402 5 138 3.1E-42 T 23-04-2016 VV93_RS07575 4b9779127d0822fcc2984119f0f2828b 228 PANTHER PTHR26402 204 222 3.1E-42 T 23-04-2016 VV93_RS07575 4b9779127d0822fcc2984119f0f2828b 228 SMART SM00448 5 118 9.0E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS07575 4b9779127d0822fcc2984119f0f2828b 228 Pfam PF12431 Transcriptional regulator 134 162 4.0E-8 T 23-04-2016 IPR028141 Transcriptional regulator VV93_RS07575 4b9779127d0822fcc2984119f0f2828b 228 PIRSF PIRSF006171 3 228 5.9E-82 T 23-04-2016 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 VV93_RS05820 0a73666f04389b4a11dd3866dcacada8 420 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 4.8E-119 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS05820 0a73666f04389b4a11dd3866dcacada8 420 PANTHER PTHR11958:SF54 1 408 5.9E-286 T 23-04-2016 VV93_RS05820 0a73666f04389b4a11dd3866dcacada8 420 SUPERFAMILY SSF118215 15 403 1.28E-109 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS05820 0a73666f04389b4a11dd3866dcacada8 420 Gene3D G3DSA:1.10.3860.10 12 410 1.2E-114 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS05820 0a73666f04389b4a11dd3866dcacada8 420 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 1.1E-52 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS05820 0a73666f04389b4a11dd3866dcacada8 420 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 1.1E-52 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS05820 0a73666f04389b4a11dd3866dcacada8 420 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 1.1E-52 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS05820 0a73666f04389b4a11dd3866dcacada8 420 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 1.1E-52 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS05820 0a73666f04389b4a11dd3866dcacada8 420 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 1.1E-52 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS05820 0a73666f04389b4a11dd3866dcacada8 420 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 1.1E-52 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS05820 0a73666f04389b4a11dd3866dcacada8 420 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 1.1E-52 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS05820 0a73666f04389b4a11dd3866dcacada8 420 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 1.1E-52 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS05820 0a73666f04389b4a11dd3866dcacada8 420 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 1.1E-52 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS05820 0a73666f04389b4a11dd3866dcacada8 420 PANTHER PTHR11958 1 408 5.9E-286 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS05970 41fe9935ebc77e5aa91acf01aadbbb43 302 Pfam PF13084 Domain of unknown function (DUF3943) 139 248 3.2E-37 T 23-04-2016 IPR025079 Domain of unknown function DUF3943 VV93_RS06530 84dcdbe82852e26ee97659fd430753fe 164 PANTHER PTHR11071 1 164 3.3E-80 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VV93_RS06530 84dcdbe82852e26ee97659fd430753fe 164 Gene3D G3DSA:2.40.100.10 2 162 6.5E-54 T 23-04-2016 IPR029000 Cyclophilin-like domain VV93_RS06530 84dcdbe82852e26ee97659fd430753fe 164 PIRSF PIRSF001467 1 163 2.3E-28 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VV93_RS06530 84dcdbe82852e26ee97659fd430753fe 164 PANTHER PTHR11071:SF192 1 164 3.3E-80 T 23-04-2016 VV93_RS06530 84dcdbe82852e26ee97659fd430753fe 164 SUPERFAMILY SSF50891 1 162 2.05E-59 T 23-04-2016 IPR029000 Cyclophilin-like domain VV93_RS06530 84dcdbe82852e26ee97659fd430753fe 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 3.0E-12 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VV93_RS06530 84dcdbe82852e26ee97659fd430753fe 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 3.0E-12 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VV93_RS06530 84dcdbe82852e26ee97659fd430753fe 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 3.0E-12 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VV93_RS06530 84dcdbe82852e26ee97659fd430753fe 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 5.0E-49 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VV93_RS06530 84dcdbe82852e26ee97659fd430753fe 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 23-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VV93_RS06315 416a5a811ffbbb8382e1cfa38c9258fb 254 SUPERFAMILY SSF47240 6 56 2.84E-72 T 23-04-2016 IPR009078 Ferritin-like superfamily VV93_RS06315 416a5a811ffbbb8382e1cfa38c9258fb 254 SUPERFAMILY SSF47240 104 250 2.84E-72 T 23-04-2016 IPR009078 Ferritin-like superfamily VV93_RS06315 416a5a811ffbbb8382e1cfa38c9258fb 254 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 5 247 6.3E-104 T 23-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 VV93_RS06315 416a5a811ffbbb8382e1cfa38c9258fb 254 PANTHER PTHR42637:SF1 1 254 3.5E-92 T 23-04-2016 VV93_RS06315 416a5a811ffbbb8382e1cfa38c9258fb 254 PIRSF PIRSF020736 1 252 3.5E-89 T 23-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 VV93_RS06315 416a5a811ffbbb8382e1cfa38c9258fb 254 Gene3D G3DSA:1.20.1260.10 104 250 1.2E-86 T 23-04-2016 IPR012347 Ferritin-related VV93_RS06315 416a5a811ffbbb8382e1cfa38c9258fb 254 Gene3D G3DSA:1.20.1260.10 3 56 1.2E-86 T 23-04-2016 IPR012347 Ferritin-related VV93_RS06315 416a5a811ffbbb8382e1cfa38c9258fb 254 PANTHER PTHR42637 1 254 3.5E-92 T 23-04-2016 VV93_RS04090 832bc300e391db4f3aef8777c3e71e00 294 SUPERFAMILY SSF48576 2 287 3.84E-87 T 23-04-2016 IPR008949 Isoprenoid synthase domain VV93_RS04090 832bc300e391db4f3aef8777c3e71e00 294 PANTHER PTHR12001:SF23 27 273 4.1E-106 T 23-04-2016 VV93_RS04090 832bc300e391db4f3aef8777c3e71e00 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VV93_RS04090 832bc300e391db4f3aef8777c3e71e00 294 Gene3D G3DSA:1.10.600.10 4 293 2.6E-91 T 23-04-2016 IPR008949 Isoprenoid synthase domain VV93_RS04090 832bc300e391db4f3aef8777c3e71e00 294 PANTHER PTHR12001 27 273 4.1E-106 T 23-04-2016 IPR017446 Polyprenyl synthetase-related VV93_RS04090 832bc300e391db4f3aef8777c3e71e00 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VV93_RS04090 832bc300e391db4f3aef8777c3e71e00 294 Pfam PF00348 Polyprenyl synthetase 28 270 5.5E-59 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VV93_RS09750 e4286c8a2dcc18f54ce097437c343b44 211 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 186 3.8E-32 T 23-04-2016 IPR023214 HAD-like domain VV93_RS09750 e4286c8a2dcc18f54ce097437c343b44 211 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 75 185 1.6E-18 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VV93_RS09750 e4286c8a2dcc18f54ce097437c343b44 211 PANTHER PTHR18901 8 210 4.6E-48 T 23-04-2016 VV93_RS09750 e4286c8a2dcc18f54ce097437c343b44 211 SUPERFAMILY SSF56784 4 210 5.56E-46 T 23-04-2016 IPR023214 HAD-like domain VV93_RS09750 e4286c8a2dcc18f54ce097437c343b44 211 Gene3D G3DSA:3.40.50.1000 90 209 6.9E-39 T 23-04-2016 IPR023214 HAD-like domain VV93_RS09750 e4286c8a2dcc18f54ce097437c343b44 211 Gene3D G3DSA:3.40.50.1000 2 18 6.9E-39 T 23-04-2016 IPR023214 HAD-like domain VV93_RS12665 460d1d8cbc8fbc83b90b9d3e8c22e0c8 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 81 1.6E-21 T 23-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VV93_RS12665 460d1d8cbc8fbc83b90b9d3e8c22e0c8 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 1.4E-20 T 23-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VV93_RS12665 460d1d8cbc8fbc83b90b9d3e8c22e0c8 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 36.329 T 23-04-2016 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VV93_RS13230 a09b4869071df8ef229754488e763d55 252 Pfam PF04794 YdjC-like protein 2 231 1.7E-50 T 23-04-2016 IPR006879 Chitooligosaccharide deacetylase ChbG-like VV93_RS13230 a09b4869071df8ef229754488e763d55 252 PANTHER PTHR31609 1 252 8.9E-63 T 23-04-2016 VV93_RS13230 a09b4869071df8ef229754488e763d55 252 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 240 37.308 T 23-04-2016 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 VV93_RS13230 a09b4869071df8ef229754488e763d55 252 Gene3D G3DSA:3.20.20.370 1 243 1.2E-71 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 VV93_RS13230 a09b4869071df8ef229754488e763d55 252 SUPERFAMILY SSF88713 1 243 4.22E-66 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VV93_RS14615 8fbb43b78714cb46ea39f63488d2dc9a 308 PANTHER PTHR10996 6 304 6.3E-119 T 23-04-2016 VV93_RS14615 8fbb43b78714cb46ea39f63488d2dc9a 308 Gene3D G3DSA:3.40.50.720 92 273 1.2E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS14615 8fbb43b78714cb46ea39f63488d2dc9a 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 100 273 7.1E-46 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VV93_RS14615 8fbb43b78714cb46ea39f63488d2dc9a 308 PANTHER PTHR10996:SF148 6 304 6.3E-119 T 23-04-2016 VV93_RS14615 8fbb43b78714cb46ea39f63488d2dc9a 308 SUPERFAMILY SSF52283 12 115 4.42E-6 T 23-04-2016 VV93_RS14615 8fbb43b78714cb46ea39f63488d2dc9a 308 SUPERFAMILY SSF51735 94 274 3.04E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS00905 0cb75b3702bb01eb0297853c26ec1b6a 201 PANTHER PTHR38693 1 200 2.0E-64 T 23-04-2016 VV93_RS00905 0cb75b3702bb01eb0297853c26ec1b6a 201 Pfam PF02036 SCP-2 sterol transfer family 18 111 4.1E-22 T 23-04-2016 IPR003033 SCP2 sterol-binding domain VV93_RS00905 0cb75b3702bb01eb0297853c26ec1b6a 201 Gene3D G3DSA:3.30.1050.10 20 115 9.9E-6 T 23-04-2016 IPR003033 SCP2 sterol-binding domain VV93_RS00905 0cb75b3702bb01eb0297853c26ec1b6a 201 SUPERFAMILY SSF55718 13 117 5.3E-10 T 23-04-2016 IPR003033 SCP2 sterol-binding domain VV93_RS00905 0cb75b3702bb01eb0297853c26ec1b6a 201 PANTHER PTHR38693:SF1 1 200 2.0E-64 T 23-04-2016 VV93_RS00625 76bfd3b86e92c011e0f3fd7ac2a412c2 213 SUPERFAMILY SSF46689 5 80 2.13E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS00625 76bfd3b86e92c011e0f3fd7ac2a412c2 213 PANTHER PTHR30055 1 206 2.2E-103 T 23-04-2016 VV93_RS00625 76bfd3b86e92c011e0f3fd7ac2a412c2 213 Gene3D G3DSA:1.10.357.10 5 195 5.3E-36 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VV93_RS00625 76bfd3b86e92c011e0f3fd7ac2a412c2 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VV93_RS00625 76bfd3b86e92c011e0f3fd7ac2a412c2 213 PANTHER PTHR30055:SF39 1 206 2.2E-103 T 23-04-2016 VV93_RS00625 76bfd3b86e92c011e0f3fd7ac2a412c2 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.4E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV93_RS02395 bb44f7ab6c4061e28b15b5fd5faf95f7 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 9.7E-16 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS02395 bb44f7ab6c4061e28b15b5fd5faf95f7 253 PANTHER PTHR30363 3 253 4.5E-136 T 23-04-2016 VV93_RS02395 bb44f7ab6c4061e28b15b5fd5faf95f7 253 SMART SM01134 73 234 1.4E-55 T 23-04-2016 VV93_RS02395 bb44f7ab6c4061e28b15b5fd5faf95f7 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 4.1E-6 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS02395 bb44f7ab6c4061e28b15b5fd5faf95f7 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 4.1E-6 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS02395 bb44f7ab6c4061e28b15b5fd5faf95f7 253 Gene3D G3DSA:3.40.50.1360 76 225 5.9E-16 T 23-04-2016 VV93_RS02395 bb44f7ab6c4061e28b15b5fd5faf95f7 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 5.2E-43 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain VV93_RS02395 bb44f7ab6c4061e28b15b5fd5faf95f7 253 SUPERFAMILY SSF46785 9 68 6.92E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS02395 bb44f7ab6c4061e28b15b5fd5faf95f7 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VV93_RS02395 bb44f7ab6c4061e28b15b5fd5faf95f7 253 SMART SM00420 9 61 2.4E-13 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV93_RS02395 bb44f7ab6c4061e28b15b5fd5faf95f7 253 Gene3D G3DSA:1.10.10.10 10 59 1.1E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS02395 bb44f7ab6c4061e28b15b5fd5faf95f7 253 SUPERFAMILY SSF100950 76 233 1.74E-31 T 23-04-2016 VV93_RS02395 bb44f7ab6c4061e28b15b5fd5faf95f7 253 PANTHER PTHR30363:SF15 3 253 4.5E-136 T 23-04-2016 VV93_RS06145 43621eecd528fb806cc89fdcfb97de2a 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.776 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 VV93_RS06145 43621eecd528fb806cc89fdcfb97de2a 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 4.7E-36 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 VV93_RS06145 43621eecd528fb806cc89fdcfb97de2a 78 Gene3D G3DSA:1.10.1200.10 3 76 4.2E-35 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain VV93_RS06145 43621eecd528fb806cc89fdcfb97de2a 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site VV93_RS06145 43621eecd528fb806cc89fdcfb97de2a 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.9E-16 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain VV93_RS06145 43621eecd528fb806cc89fdcfb97de2a 78 SUPERFAMILY SSF47336 2 76 1.27E-23 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain VV93_RS06145 43621eecd528fb806cc89fdcfb97de2a 78 PANTHER PTHR20863 5 73 1.0E-30 T 23-04-2016 VV93_RS04095 de2b79ed26cf3eb87de5bd2f0b015b1b 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 47 3.0E-20 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VV93_RS04095 de2b79ed26cf3eb87de5bd2f0b015b1b 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.346 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VV93_RS04095 de2b79ed26cf3eb87de5bd2f0b015b1b 80 PANTHER PTHR34137 1 75 2.7E-25 T 23-04-2016 VV93_RS04095 de2b79ed26cf3eb87de5bd2f0b015b1b 80 SUPERFAMILY SSF116842 2 72 4.71E-21 T 23-04-2016 VV93_RS04095 de2b79ed26cf3eb87de5bd2f0b015b1b 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 9.0E-22 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VV93_RS04095 de2b79ed26cf3eb87de5bd2f0b015b1b 80 Gene3D G3DSA:1.10.287.1040 5 75 2.3E-26 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VV93_RS04095 de2b79ed26cf3eb87de5bd2f0b015b1b 80 Pfam PF02609 Exonuclease VII small subunit 11 61 7.2E-19 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VV93_RS04095 de2b79ed26cf3eb87de5bd2f0b015b1b 80 PIRSF PIRSF006488 1 77 1.1E-21 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VV93_RS11715 18618c24e7ad42ea1ba19d2d793719b8 142 PANTHER PTHR12735:SF11 7 141 4.6E-52 T 23-04-2016 VV93_RS11715 18618c24e7ad42ea1ba19d2d793719b8 142 Pfam PF02657 Fe-S metabolism associated domain 21 139 2.1E-47 T 23-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 VV93_RS11715 18618c24e7ad42ea1ba19d2d793719b8 142 PANTHER PTHR12735 7 141 4.6E-52 T 23-04-2016 VV93_RS11715 18618c24e7ad42ea1ba19d2d793719b8 142 SUPERFAMILY SSF82649 4 141 3.98E-50 T 23-04-2016 VV93_RS11715 18618c24e7ad42ea1ba19d2d793719b8 142 Gene3D G3DSA:3.90.1010.10 5 141 1.5E-54 T 23-04-2016 VV93_RS11715 18618c24e7ad42ea1ba19d2d793719b8 142 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 141 3.5E-47 T 23-04-2016 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE VV93_RS12970 c15815bc77dc1913d9578fbf02019df9 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VV93_RS12970 c15815bc77dc1913d9578fbf02019df9 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VV93_RS12970 c15815bc77dc1913d9578fbf02019df9 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 2.3E-110 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VV93_RS12970 c15815bc77dc1913d9578fbf02019df9 358 SUPERFAMILY SSF51569 4 356 6.45E-129 T 23-04-2016 VV93_RS12970 c15815bc77dc1913d9578fbf02019df9 358 PANTHER PTHR30559 2 358 3.9E-237 T 23-04-2016 VV93_RS12970 c15815bc77dc1913d9578fbf02019df9 358 Gene3D G3DSA:3.20.20.70 11 355 4.4E-122 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS12970 c15815bc77dc1913d9578fbf02019df9 358 PIRSF PIRSF001359 13 358 1.0E-94 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VV93_RS12970 c15815bc77dc1913d9578fbf02019df9 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 2.4E-174 T 23-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 VV93_RS12970 c15815bc77dc1913d9578fbf02019df9 358 PANTHER PTHR30559:SF0 2 358 3.9E-237 T 23-04-2016 VV93_RS12970 c15815bc77dc1913d9578fbf02019df9 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 4.4E-89 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VV93_RS21095 c6d1ca4429211a0341c09dd7406e2796 417 Gene3D G3DSA:3.40.190.10 58 227 4.7E-16 T 23-04-2016 VV93_RS21095 c6d1ca4429211a0341c09dd7406e2796 417 SUPERFAMILY SSF53850 1 417 2.17E-73 T 23-04-2016 VV93_RS21095 c6d1ca4429211a0341c09dd7406e2796 417 Gene3D G3DSA:3.90.76.10 1 57 3.8E-11 T 23-04-2016 VV93_RS21095 c6d1ca4429211a0341c09dd7406e2796 417 PANTHER PTHR30290 1 417 7.8E-49 T 23-04-2016 VV93_RS21095 c6d1ca4429211a0341c09dd7406e2796 417 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 1 381 1.2E-57 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain VV93_RS21095 c6d1ca4429211a0341c09dd7406e2796 417 Gene3D G3DSA:3.10.105.10 228 417 3.5E-39 T 23-04-2016 VV93_RS10165 eb44cf32addc1afd3b7ac6dc4fb050cc 349 SMART SM00342 255 337 1.7E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV93_RS10165 eb44cf32addc1afd3b7ac6dc4fb050cc 349 Pfam PF12833 Helix-turn-helix domain 261 339 2.5E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV93_RS10165 eb44cf32addc1afd3b7ac6dc4fb050cc 349 PANTHER PTHR11019:SF52 236 345 1.0E-32 T 23-04-2016 VV93_RS10165 eb44cf32addc1afd3b7ac6dc4fb050cc 349 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 321 337 9.14E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV93_RS10165 eb44cf32addc1afd3b7ac6dc4fb050cc 349 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 321 9.14E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV93_RS10165 eb44cf32addc1afd3b7ac6dc4fb050cc 349 Gene3D G3DSA:1.10.10.60 290 339 5.2E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS10165 eb44cf32addc1afd3b7ac6dc4fb050cc 349 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 31 212 1.6E-34 T 23-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal VV93_RS10165 eb44cf32addc1afd3b7ac6dc4fb050cc 349 SUPERFAMILY SSF46689 290 341 6.27E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS10165 eb44cf32addc1afd3b7ac6dc4fb050cc 349 PANTHER PTHR11019 236 345 1.0E-32 T 23-04-2016 VV93_RS01110 e3faf5b2b2a5a1522a0695eb340e1edd 275 PANTHER PTHR20854 1 273 3.9E-89 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VV93_RS01110 e3faf5b2b2a5a1522a0695eb340e1edd 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 6.0E-14 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VV93_RS01110 e3faf5b2b2a5a1522a0695eb340e1edd 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 185 206 6.0E-14 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VV93_RS01110 e3faf5b2b2a5a1522a0695eb340e1edd 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 217 241 6.0E-14 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VV93_RS01110 e3faf5b2b2a5a1522a0695eb340e1edd 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 6.0E-14 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VV93_RS01110 e3faf5b2b2a5a1522a0695eb340e1edd 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 6.0E-14 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VV93_RS01110 e3faf5b2b2a5a1522a0695eb340e1edd 275 SUPERFAMILY SSF56655 6 272 9.29E-78 T 23-04-2016 VV93_RS01110 e3faf5b2b2a5a1522a0695eb340e1edd 275 PANTHER PTHR20854:SF5 1 273 3.9E-89 T 23-04-2016 VV93_RS01110 e3faf5b2b2a5a1522a0695eb340e1edd 275 Gene3D G3DSA:3.30.540.10 6 158 1.4E-45 T 23-04-2016 VV93_RS01110 e3faf5b2b2a5a1522a0695eb340e1edd 275 Gene3D G3DSA:3.40.190.80 161 262 1.3E-34 T 23-04-2016 VV93_RS01110 e3faf5b2b2a5a1522a0695eb340e1edd 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 3.8E-105 T 23-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 VV93_RS01110 e3faf5b2b2a5a1522a0695eb340e1edd 275 Pfam PF00459 Inositol monophosphatase family 8 252 3.9E-52 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VV93_RS05470 62fb83547ce655f7b7e0254b8e98606a 294 PANTHER PTHR11122:SF14 5 289 1.3E-93 T 23-04-2016 VV93_RS05470 62fb83547ce655f7b7e0254b8e98606a 294 PIRSF PIRSF016020 5 294 8.9E-62 T 23-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 VV93_RS05470 62fb83547ce655f7b7e0254b8e98606a 294 SUPERFAMILY SSF74650 6 288 6.91E-75 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VV93_RS05470 62fb83547ce655f7b7e0254b8e98606a 294 Pfam PF01263 Aldose 1-epimerase 27 291 1.4E-51 T 23-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VV93_RS05470 62fb83547ce655f7b7e0254b8e98606a 294 PANTHER PTHR11122 5 289 1.3E-93 T 23-04-2016 VV93_RS05470 62fb83547ce655f7b7e0254b8e98606a 294 Gene3D G3DSA:2.70.98.10 12 292 1.2E-85 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 VV93_RS03045 4b42292ddf2aa3cd5d257aacd646c6bf 437 PANTHER PTHR30588:SF0 2 437 1.8E-203 T 23-04-2016 VV93_RS03045 4b42292ddf2aa3cd5d257aacd646c6bf 437 Pfam PF05525 Branched-chain amino acid transport protein 8 426 3.1E-153 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VV93_RS03045 4b42292ddf2aa3cd5d257aacd646c6bf 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 1.1E-137 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VV93_RS03045 4b42292ddf2aa3cd5d257aacd646c6bf 437 PANTHER PTHR30588 2 437 1.8E-203 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VV93_RS15100 63511ed8edfba63e0c9425be8fb59cf5 264 Pfam PF07070 SpoOM protein 4 220 3.8E-77 T 23-04-2016 IPR009776 Sporulation stage 0, protein M VV93_RS15100 63511ed8edfba63e0c9425be8fb59cf5 264 PANTHER PTHR40053 1 262 9.7E-83 T 23-04-2016 VV93_RS10905 347ae0ae766a41059e3223ee6bcad9e0 205 Pfam PF00005 ABC transporter 18 158 1.8E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS10905 347ae0ae766a41059e3223ee6bcad9e0 205 PANTHER PTHR24220 3 189 5.0E-94 T 23-04-2016 VV93_RS10905 347ae0ae766a41059e3223ee6bcad9e0 205 SUPERFAMILY SSF52540 2 193 1.82E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10905 347ae0ae766a41059e3223ee6bcad9e0 205 Gene3D G3DSA:3.40.50.300 2 192 1.7E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10905 347ae0ae766a41059e3223ee6bcad9e0 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 2.1E-78 T 23-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 VV93_RS10905 347ae0ae766a41059e3223ee6bcad9e0 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS10905 347ae0ae766a41059e3223ee6bcad9e0 205 PANTHER PTHR24220:SF508 3 189 5.0E-94 T 23-04-2016 VV93_RS10905 347ae0ae766a41059e3223ee6bcad9e0 205 SMART SM00382 26 205 2.7E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS06565 81df0e395ec063be28e5a8a199e5c20f 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 2.8E-38 T 23-04-2016 IPR013468 Conserved hypothetical protein CHP02647 VV93_RS06565 81df0e395ec063be28e5a8a199e5c20f 77 Pfam PF06146 Phosphate-starvation-inducible E 9 68 1.1E-9 T 23-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like VV93_RS06735 e08c60a44f5e57aecdaef2cfd4575e17 309 Gene3D G3DSA:3.40.50.150 44 297 1.4E-55 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS06735 e08c60a44f5e57aecdaef2cfd4575e17 309 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 304 2.1E-165 T 23-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VV93_RS06735 e08c60a44f5e57aecdaef2cfd4575e17 309 PANTHER PTHR11061:SF34 1 308 8.3E-84 T 23-04-2016 VV93_RS06735 e08c60a44f5e57aecdaef2cfd4575e17 309 SUPERFAMILY SSF53335 4 287 2.18E-50 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS06735 e08c60a44f5e57aecdaef2cfd4575e17 309 PANTHER PTHR11061 1 308 8.3E-84 T 23-04-2016 VV93_RS07500 4cfd19ebb12480d940f6deb8220fa2ce 286 PANTHER PTHR30176 4 283 5.5E-70 T 23-04-2016 VV93_RS07500 4cfd19ebb12480d940f6deb8220fa2ce 286 SUPERFAMILY SSF54862 93 142 6.91E-21 T 23-04-2016 VV93_RS07500 4cfd19ebb12480d940f6deb8220fa2ce 286 SUPERFAMILY SSF54862 190 278 6.91E-21 T 23-04-2016 VV93_RS07500 4cfd19ebb12480d940f6deb8220fa2ce 286 Gene3D G3DSA:3.30.70.20 107 109 1.0E-15 T 23-04-2016 VV93_RS07500 4cfd19ebb12480d940f6deb8220fa2ce 286 Gene3D G3DSA:3.30.70.20 190 278 1.0E-15 T 23-04-2016 VV93_RS07500 4cfd19ebb12480d940f6deb8220fa2ce 286 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 257 268 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV93_RS07500 4cfd19ebb12480d940f6deb8220fa2ce 286 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 225 236 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV93_RS07500 4cfd19ebb12480d940f6deb8220fa2ce 286 Pfam PF13187 4Fe-4S dicluster domain 224 270 9.4E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV93_RS07500 4cfd19ebb12480d940f6deb8220fa2ce 286 Pfam PF12801 4Fe-4S binding domain 174 211 9.2E-5 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV93_RS07500 4cfd19ebb12480d940f6deb8220fa2ce 286 Pfam PF12801 4Fe-4S binding domain 82 127 8.5E-13 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV93_RS07500 4cfd19ebb12480d940f6deb8220fa2ce 286 PANTHER PTHR30176:SF2 4 283 5.5E-70 T 23-04-2016 VV93_RS07500 4cfd19ebb12480d940f6deb8220fa2ce 286 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 25 275 3.2E-116 T 23-04-2016 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 VV93_RS06765 3bd79d2e79d29aed52507f3e73f68a57 207 Pfam PF01066 CDP-alcohol phosphatidyltransferase 26 89 9.3E-10 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VV93_RS06765 3bd79d2e79d29aed52507f3e73f68a57 207 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VV93_RS15960 8ab44ca97e009d2aecb6a27509c650ae 329 SUPERFAMILY SSF56349 143 191 4.12E-5 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS15960 8ab44ca97e009d2aecb6a27509c650ae 329 Gene3D G3DSA:1.10.443.10 143 190 4.7E-4 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS06775 e486d08dab72065f9d7be5931cc39c98 566 SUPERFAMILY SSF161098 5 274 3.79E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06775 e486d08dab72065f9d7be5931cc39c98 566 PANTHER PTHR30183 36 548 2.6E-169 T 23-04-2016 VV93_RS06775 e486d08dab72065f9d7be5931cc39c98 566 SUPERFAMILY SSF161098 298 537 4.8E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06775 e486d08dab72065f9d7be5931cc39c98 566 Gene3D G3DSA:1.10.3720.10 3 277 4.0E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06775 e486d08dab72065f9d7be5931cc39c98 566 Gene3D G3DSA:1.10.3720.10 299 544 2.9E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS06775 e486d08dab72065f9d7be5931cc39c98 566 PANTHER PTHR30183:SF6 36 548 2.6E-169 T 23-04-2016 VV93_RS13825 4783a5c3ec5ce2249f42795e14863dd9 196 PANTHER PTHR40278:SF1 1 196 3.0E-42 T 23-04-2016 VV93_RS13825 4783a5c3ec5ce2249f42795e14863dd9 196 PANTHER PTHR40278 1 196 3.0E-42 T 23-04-2016 VV93_RS13825 4783a5c3ec5ce2249f42795e14863dd9 196 Pfam PF05137 Fimbrial assembly protein (PilN) 102 177 8.4E-15 T 23-04-2016 IPR007813 Fimbrial assembly PilN VV93_RS01455 1daff0aa6e218ca32b230adda0467de2 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 23-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site VV93_RS01455 1daff0aa6e218ca32b230adda0467de2 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 2.0E-77 T 23-04-2016 IPR001405 RadC protein VV93_RS01455 1daff0aa6e218ca32b230adda0467de2 224 SUPERFAMILY SSF102712 130 192 5.89E-5 T 23-04-2016 VV93_RS01455 1daff0aa6e218ca32b230adda0467de2 224 PANTHER PTHR30471:SF5 1 224 2.4E-143 T 23-04-2016 VV93_RS01455 1daff0aa6e218ca32b230adda0467de2 224 Pfam PF04002 RadC-like JAB domain 104 222 1.8E-45 T 23-04-2016 IPR025657 RadC-like JAB domain VV93_RS01455 1daff0aa6e218ca32b230adda0467de2 224 PANTHER PTHR30471 1 224 2.4E-143 T 23-04-2016 VV93_RS01455 1daff0aa6e218ca32b230adda0467de2 224 SUPERFAMILY SSF47781 17 91 2.71E-10 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VV93_RS01455 1daff0aa6e218ca32b230adda0467de2 224 Gene3D G3DSA:3.40.140.10 101 224 2.9E-51 T 23-04-2016 VV93_RS01355 386c1b3fa6f82d2c8762041d008f311f 118 Pfam PF07878 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 8 44 1.4E-7 T 23-04-2016 IPR012869 CopG-like ribbon-helix-helix domain VV93_RS01355 386c1b3fa6f82d2c8762041d008f311f 118 Gene3D G3DSA:1.10.1220.10 14 67 1.8E-4 T 23-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 Gene3D G3DSA:3.40.50.300 798 949 4.0E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1472 11.115 T 23-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 Pfam PF04310 MukB N-terminal 2 227 1.8E-121 T 23-04-2016 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 PANTHER PTHR18937:SF201 99 529 0.0 T 23-04-2016 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 PANTHER PTHR18937:SF201 554 625 0.0 T 23-04-2016 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 PANTHER PTHR18937:SF201 1427 1460 0.0 T 23-04-2016 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 PANTHER PTHR18937:SF201 898 939 0.0 T 23-04-2016 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 PANTHER PTHR18937:SF201 978 1117 0.0 T 23-04-2016 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 PANTHER PTHR18937:SF201 1213 1249 0.0 T 23-04-2016 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 PANTHER PTHR18937:SF201 848 879 0.0 T 23-04-2016 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 PANTHER PTHR18937:SF201 649 815 0.0 T 23-04-2016 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 1.2E-14 T 23-04-2016 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 Pfam PF16330 MukB hinge domain 646 811 1.5E-71 T 23-04-2016 IPR032520 MukB, hinge domain VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 Gene3D G3DSA:3.40.1140.10 1 225 3.0E-43 T 23-04-2016 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 PANTHER PTHR18937 99 529 0.0 T 23-04-2016 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 PANTHER PTHR18937 554 625 0.0 T 23-04-2016 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 PANTHER PTHR18937 1427 1460 0.0 T 23-04-2016 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 PANTHER PTHR18937 898 939 0.0 T 23-04-2016 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 PANTHER PTHR18937 978 1117 0.0 T 23-04-2016 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 PANTHER PTHR18937 1213 1249 0.0 T 23-04-2016 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 PANTHER PTHR18937 848 879 0.0 T 23-04-2016 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 PANTHER PTHR18937 649 815 0.0 T 23-04-2016 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 PIRSF PIRSF005246 1 1487 0.0 T 23-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VV93_RS10170 31c377b43818238ec5d02209be54914a 1487 SUPERFAMILY SSF52540 26 224 2.66E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS03735 b70f614fb84bc3a32492477202e01387 580 PANTHER PTHR37323:SF1 1 578 3.3E-124 T 23-04-2016 VV93_RS03735 b70f614fb84bc3a32492477202e01387 580 Pfam PF13444 Acetyltransferase (GNAT) domain 329 430 1.2E-19 T 23-04-2016 VV93_RS03735 b70f614fb84bc3a32492477202e01387 580 SUPERFAMILY SSF69593 42 252 3.66E-12 T 23-04-2016 VV93_RS03735 b70f614fb84bc3a32492477202e01387 580 Pfam PF01553 Acyltransferase 66 194 1.1E-5 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VV93_RS03735 b70f614fb84bc3a32492477202e01387 580 PANTHER PTHR37323 1 578 3.3E-124 T 23-04-2016 VV93_RS03735 b70f614fb84bc3a32492477202e01387 580 SUPERFAMILY SSF55729 312 458 9.0E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS03735 b70f614fb84bc3a32492477202e01387 580 SMART SM00563 74 197 1.3E-9 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VV93_RS10305 01332d6f2163d9252b0a61e87a35be21 205 PANTHER PTHR38108 1 205 4.5E-17 T 23-04-2016 VV93_RS10305 01332d6f2163d9252b0a61e87a35be21 205 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 200 9.9E-35 T 23-04-2016 IPR018635 Uncharacterised protein family UPF0319 VV93_RS10305 01332d6f2163d9252b0a61e87a35be21 205 PANTHER PTHR38108:SF1 1 205 4.5E-17 T 23-04-2016 VV93_RS10305 01332d6f2163d9252b0a61e87a35be21 205 Hamap MF_00789 UPF0319 protein YccT [yccT]. 3 203 21.491 T 23-04-2016 IPR018635 Uncharacterised protein family UPF0319 VV93_RS11035 28a43d9ccff393082f6dd1a8221130a3 581 Pfam PF01514 Secretory protein of YscJ/FliF family 64 250 9.7E-55 T 23-04-2016 IPR006182 Secretory protein YscJ/FliF VV93_RS11035 28a43d9ccff393082f6dd1a8221130a3 581 Pfam PF08345 Flagellar M-ring protein C-terminal 283 453 1.9E-40 T 23-04-2016 IPR013556 Flagellar M-ring C-terminal VV93_RS11035 28a43d9ccff393082f6dd1a8221130a3 581 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 55 579 1.7E-75 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VV93_RS11035 28a43d9ccff393082f6dd1a8221130a3 581 PANTHER PTHR30046:SF0 31 580 6.3E-184 T 23-04-2016 VV93_RS11035 28a43d9ccff393082f6dd1a8221130a3 581 PANTHER PTHR30046 31 580 6.3E-184 T 23-04-2016 VV93_RS11035 28a43d9ccff393082f6dd1a8221130a3 581 PRINTS PR01009 Flagellar M-ring protein signature 183 197 1.9E-22 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VV93_RS11035 28a43d9ccff393082f6dd1a8221130a3 581 PRINTS PR01009 Flagellar M-ring protein signature 226 244 1.9E-22 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VV93_RS11035 28a43d9ccff393082f6dd1a8221130a3 581 PRINTS PR01009 Flagellar M-ring protein signature 376 400 1.9E-22 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VV93_RS11035 28a43d9ccff393082f6dd1a8221130a3 581 PRINTS PR01009 Flagellar M-ring protein signature 151 169 1.9E-22 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VV93_RS11035 28a43d9ccff393082f6dd1a8221130a3 581 PRINTS PR01009 Flagellar M-ring protein signature 296 314 1.9E-22 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VV93_RS11035 28a43d9ccff393082f6dd1a8221130a3 581 PIRSF PIRSF004862 29 581 2.3E-172 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VV93_RS03205 d19c9a27c57e20661c113d32b53ed580 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 5.5E-23 T 23-04-2016 IPR021242 Protein of unknown function DUF2799 VV93_RS06690 544633fdddfd6fbc7e0ef3acf7047dee 343 PANTHER PTHR30469 4 335 7.3E-123 T 23-04-2016 VV93_RS06690 544633fdddfd6fbc7e0ef3acf7047dee 343 SUPERFAMILY SSF111369 47 264 9.68E-32 T 23-04-2016 VV93_RS06690 544633fdddfd6fbc7e0ef3acf7047dee 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 247 2.0E-11 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV93_RS06690 544633fdddfd6fbc7e0ef3acf7047dee 343 Gene3D G3DSA:2.40.50.100 60 90 1.3E-13 T 23-04-2016 VV93_RS06690 544633fdddfd6fbc7e0ef3acf7047dee 343 Gene3D G3DSA:2.40.50.100 151 183 1.3E-13 T 23-04-2016 VV93_RS06690 544633fdddfd6fbc7e0ef3acf7047dee 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 337 6.6E-87 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VV93_RS06690 544633fdddfd6fbc7e0ef3acf7047dee 343 PANTHER PTHR30469:SF10 4 335 7.3E-123 T 23-04-2016 VV93_RS07035 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 PANTHER PTHR40457 23 255 4.5E-55 T 23-04-2016 VV93_RS07035 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 Pfam PF02253 Phospholipase A1 19 252 1.9E-60 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VV93_RS07035 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 SUPERFAMILY SSF56931 14 255 1.26E-71 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VV93_RS07035 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 123 137 4.1E-26 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VV93_RS07035 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 170 188 4.1E-26 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VV93_RS07035 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 138 156 4.1E-26 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VV93_RS07035 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 203 220 4.1E-26 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VV93_RS07035 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 225 245 4.1E-26 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VV93_RS07035 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 54 71 4.1E-26 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VV93_RS07035 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 Gene3D G3DSA:2.40.230.10 17 255 8.2E-70 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VV93_RS04830 1b729dd4f4be99cff4b0e590f6138b03 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 7.9E-18 T 23-04-2016 IPR021249 Protein of unknown function DUF2788 VV93_RS01550 3b4f48ae1a98508a86d36ae3c2ed15cf 354 SUPERFAMILY SSF53335 47 353 1.38E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS01550 3b4f48ae1a98508a86d36ae3c2ed15cf 354 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 185 314 6.5E-18 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VV93_RS01550 3b4f48ae1a98508a86d36ae3c2ed15cf 354 Pfam PF05050 Methyltransferase FkbM domain 188 316 5.7E-7 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VV93_RS01550 3b4f48ae1a98508a86d36ae3c2ed15cf 354 Gene3D G3DSA:3.40.50.150 179 353 5.8E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00640 27a7ffcb54d4426e558768ddb706dee2 468 PANTHER PTHR30349 235 449 1.9E-14 T 23-04-2016 VV93_RS00640 27a7ffcb54d4426e558768ddb706dee2 468 SUPERFAMILY SSF56349 212 449 1.68E-20 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS00640 27a7ffcb54d4426e558768ddb706dee2 468 Pfam PF00589 Phage integrase family 253 444 3.2E-9 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS00640 27a7ffcb54d4426e558768ddb706dee2 468 PANTHER PTHR30349:SF20 235 449 1.9E-14 T 23-04-2016 VV93_RS00640 27a7ffcb54d4426e558768ddb706dee2 468 Gene3D G3DSA:1.10.443.10 251 450 3.3E-21 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS10745 8058209de1e6adcabb4c2f9354bd214c 187 SUPERFAMILY SSF110997 110 183 4.84E-16 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 VV93_RS10745 8058209de1e6adcabb4c2f9354bd214c 187 Pfam PF05036 Sporulation related domain 111 178 4.4E-13 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 VV93_RS10745 8058209de1e6adcabb4c2f9354bd214c 187 PANTHER PTHR38687:SF1 2 187 3.2E-42 T 23-04-2016 VV93_RS10745 8058209de1e6adcabb4c2f9354bd214c 187 PANTHER PTHR38687 2 187 3.2E-42 T 23-04-2016 VV93_RS10745 8058209de1e6adcabb4c2f9354bd214c 187 Gene3D G3DSA:3.30.70.1070 106 184 2.2E-20 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 VV93_RS02195 b07fef265cbd2d42acda6975abc236aa 219 PIRSF PIRSF004649 8 219 5.3E-55 T 23-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VV93_RS02195 b07fef265cbd2d42acda6975abc236aa 219 Gene3D G3DSA:3.10.450.50 123 180 3.2E-17 T 23-04-2016 IPR032710 NTF2-like domain VV93_RS02195 b07fef265cbd2d42acda6975abc236aa 219 Gene3D G3DSA:3.10.450.50 35 79 3.2E-17 T 23-04-2016 IPR032710 NTF2-like domain VV93_RS02195 b07fef265cbd2d42acda6975abc236aa 219 Pfam PF05494 MlaC protein 41 206 1.7E-46 T 23-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VV93_RS02195 b07fef265cbd2d42acda6975abc236aa 219 PANTHER PTHR36573 9 219 1.9E-65 T 23-04-2016 VV93_RS02195 b07fef265cbd2d42acda6975abc236aa 219 Gene3D G3DSA:1.10.10.640 181 211 3.1E-9 T 23-04-2016 IPR023094 Toluene tolerance protein, alpha-helical VV93_RS02195 b07fef265cbd2d42acda6975abc236aa 219 Gene3D G3DSA:1.10.10.640 86 120 3.1E-9 T 23-04-2016 IPR023094 Toluene tolerance protein, alpha-helical VV93_RS01335 4ae5a75c04ae75c0a418f5adab6c81b0 235 Pfam PF06992 Replication protein P 16 130 6.3E-16 T 23-04-2016 IPR009731 Replication P GO:0006270 VV93_RS02680 aceb12196e48e3b0aa5d5ba35e6d5071 149 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 1.5E-38 T 23-04-2016 IPR009659 Protein of unknown function DUF1249 VV93_RS02680 aceb12196e48e3b0aa5d5ba35e6d5071 149 PANTHER PTHR38774:SF1 2 149 9.6E-53 T 23-04-2016 VV93_RS02680 aceb12196e48e3b0aa5d5ba35e6d5071 149 PANTHER PTHR38774 2 149 9.6E-53 T 23-04-2016 VV93_RS08115 8d86b7339dd211beb5c5c61049b27894 65 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 10 31 3.9E-5 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VV93_RS08115 8d86b7339dd211beb5c5c61049b27894 65 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 65 2.3E-28 T 23-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing VV93_RS08115 8d86b7339dd211beb5c5c61049b27894 65 PIRSF PIRSF036704 1 65 3.8E-33 T 23-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing VV93_RS08115 8d86b7339dd211beb5c5c61049b27894 65 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 37 5.1E-5 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VV93_RS12980 465391ccc220802bb1f9af46a5997f9d 346 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 337 3.7E-191 T 23-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 VV93_RS12980 465391ccc220802bb1f9af46a5997f9d 346 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 169 325 8.5E-56 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS12980 465391ccc220802bb1f9af46a5997f9d 346 SUPERFAMILY SSF55347 164 326 2.8E-59 T 23-04-2016 VV93_RS12980 465391ccc220802bb1f9af46a5997f9d 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 281 296 1.6E-31 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS12980 465391ccc220802bb1f9af46a5997f9d 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 241 258 1.6E-31 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS12980 465391ccc220802bb1f9af46a5997f9d 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 185 201 1.6E-31 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS12980 465391ccc220802bb1f9af46a5997f9d 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 121 134 1.6E-31 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS12980 465391ccc220802bb1f9af46a5997f9d 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 158 176 1.6E-31 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS12980 465391ccc220802bb1f9af46a5997f9d 346 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 346 66.402 T 23-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 VV93_RS12980 465391ccc220802bb1f9af46a5997f9d 346 SUPERFAMILY SSF51735 2 188 2.38E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS12980 465391ccc220802bb1f9af46a5997f9d 346 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 164 3.4E-47 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS12980 465391ccc220802bb1f9af46a5997f9d 346 PANTHER PTHR10836:SF47 1 342 4.1E-233 T 23-04-2016 VV93_RS12980 465391ccc220802bb1f9af46a5997f9d 346 Gene3D G3DSA:3.40.50.720 1 172 2.7E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS12980 465391ccc220802bb1f9af46a5997f9d 346 Gene3D G3DSA:3.30.360.10 173 327 4.8E-62 T 23-04-2016 VV93_RS12980 465391ccc220802bb1f9af46a5997f9d 346 PIRSF PIRSF000149 1 346 1.8E-125 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS12980 465391ccc220802bb1f9af46a5997f9d 346 PANTHER PTHR10836 1 342 4.1E-233 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS12980 465391ccc220802bb1f9af46a5997f9d 346 SMART SM00846 2 164 8.7E-65 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VV93_RS13525 a19e67979d1667eaf0057ffc88f058e5 192 SUPERFAMILY SSF54523 8 104 1.65E-12 T 23-04-2016 VV93_RS13525 a19e67979d1667eaf0057ffc88f058e5 192 Pfam PF13633 Prokaryotic N-terminal methylation site 5 29 4.9E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS13525 a19e67979d1667eaf0057ffc88f058e5 192 Gene3D G3DSA:3.30.700.10 8 57 9.0E-6 T 23-04-2016 VV93_RS13525 a19e67979d1667eaf0057ffc88f058e5 192 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 3.8E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS13525 a19e67979d1667eaf0057ffc88f058e5 192 PANTHER PTHR30093 1 61 6.1E-13 T 23-04-2016 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 3.1E-258 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 Pfam PF01578 Cytochrome C assembly protein 89 297 2.2E-54 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 4.9E-63 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 4.9E-63 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 4.9E-63 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 4.9E-63 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 4.9E-63 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 4.9E-63 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 4.9E-63 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 3.4E-95 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 3.4E-95 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 3.4E-95 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 3.4E-95 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 3.4E-95 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 3.4E-95 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 3.4E-95 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 3.4E-95 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PANTHER PTHR30009:SF0 1 418 0.0 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PANTHER PTHR30009:SF0 470 657 0.0 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PANTHER PTHR30009 1 418 0.0 T 23-04-2016 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 PANTHER PTHR30009 470 657 0.0 T 23-04-2016 VV93_RS10880 485be2fe06f01812fe948e807c06f13d 660 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 5.1E-126 T 23-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VV93_RS08130 11b3cd5b2cf18e6ba8694427854741b4 195 Pfam PF11748 Protein of unknown function (DUF3306) 5 112 5.5E-20 T 23-04-2016 IPR021735 Protein of unknown function DUF3306 VV93_RS03440 9cbc2826b753981ffe4f664b273b8532 232 Gene3D G3DSA:1.20.58.220 6 113 7.2E-37 T 23-04-2016 VV93_RS03440 9cbc2826b753981ffe4f664b273b8532 232 PANTHER PTHR10010:SF14 1 225 1.7E-89 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VV93_RS03440 9cbc2826b753981ffe4f664b273b8532 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 1.2E-74 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VV93_RS03440 9cbc2826b753981ffe4f664b273b8532 232 Gene3D G3DSA:1.20.58.220 124 223 1.2E-30 T 23-04-2016 VV93_RS03440 9cbc2826b753981ffe4f664b273b8532 232 SUPERFAMILY SSF109755 10 226 1.36E-69 T 23-04-2016 VV93_RS03440 9cbc2826b753981ffe4f664b273b8532 232 PIRSF PIRSF003107 4 223 9.5E-69 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VV93_RS03440 9cbc2826b753981ffe4f664b273b8532 232 Pfam PF01895 PhoU domain 23 108 3.2E-21 T 23-04-2016 IPR026022 PhoU domain VV93_RS03440 9cbc2826b753981ffe4f664b273b8532 232 Pfam PF01895 PhoU domain 128 210 3.4E-17 T 23-04-2016 IPR026022 PhoU domain VV93_RS03440 9cbc2826b753981ffe4f664b273b8532 232 PANTHER PTHR10010 1 225 1.7E-89 T 23-04-2016 VV93_RS19730 0ba673c13d85866bc50ddd4ea4754cd3 69 PANTHER PTHR11451 1 69 8.7E-12 T 23-04-2016 VV93_RS19730 0ba673c13d85866bc50ddd4ea4754cd3 69 PANTHER PTHR11451:SF29 1 69 8.7E-12 T 23-04-2016 VV93_RS19730 0ba673c13d85866bc50ddd4ea4754cd3 69 Gene3D G3DSA:2.40.240.10 1 69 2.3E-26 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 VV93_RS19730 0ba673c13d85866bc50ddd4ea4754cd3 69 SUPERFAMILY SSF50715 1 69 1.1E-23 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 VV93_RS19730 0ba673c13d85866bc50ddd4ea4754cd3 69 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 1 69 4.7E-20 T 23-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 VV93_RS02530 56fef2b413afd72672b86385945ae853 62 PANTHER PTHR36154 1 61 5.1E-16 T 23-04-2016 VV93_RS02530 56fef2b413afd72672b86385945ae853 62 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 51 6.3E-24 T 23-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) VV93_RS02530 56fef2b413afd72672b86385945ae853 62 SUPERFAMILY SSF46955 2 56 7.51E-5 T 23-04-2016 IPR009061 Putative DNA-binding domain VV93_RS15735 11bfb02ee7173291ce36be41ca6e7427 149 PANTHER PTHR22911 2 145 5.5E-27 T 23-04-2016 VV93_RS15735 11bfb02ee7173291ce36be41ca6e7427 149 PANTHER PTHR22911:SF27 2 145 5.5E-27 T 23-04-2016 VV93_RS15735 11bfb02ee7173291ce36be41ca6e7427 149 SUPERFAMILY SSF103481 2 92 1.27E-5 T 23-04-2016 VV93_RS09675 f4b4001bb62a48ed07e9cf3a3270675a 309 Gene3D G3DSA:3.40.50.1100 94 294 1.3E-16 T 23-04-2016 VV93_RS09675 f4b4001bb62a48ed07e9cf3a3270675a 309 SUPERFAMILY SSF53686 9 295 9.72E-58 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VV93_RS05275 b3d85439d9cb7681cae4f6afecba6c52 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 23-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site VV93_RS05275 b3d85439d9cb7681cae4f6afecba6c52 619 SUPERFAMILY SSF109998 203 242 3.73E-39 T 23-04-2016 IPR027304 Trigger factor/SurA domain VV93_RS05275 b3d85439d9cb7681cae4f6afecba6c52 619 SUPERFAMILY SSF109998 39 169 3.73E-39 T 23-04-2016 IPR027304 Trigger factor/SurA domain VV93_RS05275 b3d85439d9cb7681cae4f6afecba6c52 619 Pfam PF13616 PPIC-type PPIASE domain 262 361 8.8E-25 T 23-04-2016 VV93_RS05275 b3d85439d9cb7681cae4f6afecba6c52 619 SUPERFAMILY SSF54534 224 361 5.95E-30 T 23-04-2016 VV93_RS05275 b3d85439d9cb7681cae4f6afecba6c52 619 Pfam PF13624 SurA N-terminal domain 1 166 3.7E-50 T 23-04-2016 VV93_RS05275 b3d85439d9cb7681cae4f6afecba6c52 619 PANTHER PTHR10657:SF13 1 175 2.2E-171 T 23-04-2016 VV93_RS05275 b3d85439d9cb7681cae4f6afecba6c52 619 PANTHER PTHR10657:SF13 203 517 2.2E-171 T 23-04-2016 VV93_RS05275 b3d85439d9cb7681cae4f6afecba6c52 619 PANTHER PTHR10657 1 175 2.2E-171 T 23-04-2016 VV93_RS05275 b3d85439d9cb7681cae4f6afecba6c52 619 PANTHER PTHR10657 203 517 2.2E-171 T 23-04-2016 VV93_RS05275 b3d85439d9cb7681cae4f6afecba6c52 619 Gene3D G3DSA:3.10.50.40 262 386 1.2E-41 T 23-04-2016 VV93_RS06925 7c5f0c7069a7d519a07c69a69acb7915 284 PANTHER PTHR30514 1 271 6.9E-194 T 23-04-2016 VV93_RS06925 7c5f0c7069a7d519a07c69a69acb7915 284 Gene3D G3DSA:1.10.10.10 1 80 2.5E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS06925 7c5f0c7069a7d519a07c69a69acb7915 284 Pfam PF01380 SIS domain 124 252 5.8E-25 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VV93_RS06925 7c5f0c7069a7d519a07c69a69acb7915 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.0E-28 T 23-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VV93_RS06925 7c5f0c7069a7d519a07c69a69acb7915 284 SUPERFAMILY SSF53697 93 279 3.71E-40 T 23-04-2016 VV93_RS06925 7c5f0c7069a7d519a07c69a69acb7915 284 Gene3D G3DSA:3.40.50.10490 96 270 3.8E-38 T 23-04-2016 VV93_RS06925 7c5f0c7069a7d519a07c69a69acb7915 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS06925 7c5f0c7069a7d519a07c69a69acb7915 284 PANTHER PTHR30514:SF7 1 271 6.9E-194 T 23-04-2016 VV93_RS04560 71ee03f0f4bf779a4bb982b57aedc63d 275 SMART SM00138 8 272 3.0E-133 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV93_RS04560 71ee03f0f4bf779a4bb982b57aedc63d 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 1.7E-68 T 23-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VV93_RS04560 71ee03f0f4bf779a4bb982b57aedc63d 275 SUPERFAMILY SSF47757 3 75 1.27E-14 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VV93_RS04560 71ee03f0f4bf779a4bb982b57aedc63d 275 SUPERFAMILY SSF53335 76 269 6.0E-50 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS04560 71ee03f0f4bf779a4bb982b57aedc63d 275 PANTHER PTHR24422:SF9 1 275 9.9E-122 T 23-04-2016 VV93_RS04560 71ee03f0f4bf779a4bb982b57aedc63d 275 Gene3D G3DSA:3.40.50.150 75 270 2.2E-64 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS04560 71ee03f0f4bf779a4bb982b57aedc63d 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 3.897405E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV93_RS04560 71ee03f0f4bf779a4bb982b57aedc63d 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 3.897405E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV93_RS04560 71ee03f0f4bf779a4bb982b57aedc63d 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 3.897405E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV93_RS04560 71ee03f0f4bf779a4bb982b57aedc63d 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 3.897405E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV93_RS04560 71ee03f0f4bf779a4bb982b57aedc63d 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 3.897405E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV93_RS04560 71ee03f0f4bf779a4bb982b57aedc63d 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 3.897405E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV93_RS04560 71ee03f0f4bf779a4bb982b57aedc63d 275 PANTHER PTHR24422 1 275 9.9E-122 T 23-04-2016 VV93_RS04560 71ee03f0f4bf779a4bb982b57aedc63d 275 Gene3D G3DSA:1.10.155.10 3 74 2.9E-15 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VV93_RS04560 71ee03f0f4bf779a4bb982b57aedc63d 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 6.3E-10 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VV93_RS11640 6362a779be0f188faa355360b81c4816 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 406 9.5E-109 T 23-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 VV93_RS11640 6362a779be0f188faa355360b81c4816 414 PIRSF PIRSF016055 1 414 7.7E-201 T 23-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VV93_RS11640 6362a779be0f188faa355360b81c4816 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.469 T 23-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VV93_RS11640 6362a779be0f188faa355360b81c4816 414 PANTHER PTHR30578 3 414 4.2E-262 T 23-04-2016 VV93_RS11640 6362a779be0f188faa355360b81c4816 414 PANTHER PTHR30578:SF1 3 414 4.2E-262 T 23-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VV93_RS11640 6362a779be0f188faa355360b81c4816 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 9.0E-205 T 23-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VV93_RS02125 59bcf19787353b4c0c601ad2e32be095 91 PANTHER PTHR33705:SF2 1 91 4.9E-37 T 23-04-2016 VV93_RS02125 59bcf19787353b4c0c601ad2e32be095 91 Gene3D G3DSA:3.30.1340.10 3 89 1.4E-27 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like VV93_RS02125 59bcf19787353b4c0c601ad2e32be095 91 SUPERFAMILY SSF55594 4 90 2.09E-25 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like VV93_RS02125 59bcf19787353b4c0c601ad2e32be095 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 23-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VV93_RS02125 59bcf19787353b4c0c601ad2e32be095 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 1.9E-9 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like VV93_RS02125 59bcf19787353b4c0c601ad2e32be095 91 PRINTS PR00107 Phosphocarrier protein signature 14 30 1.9E-9 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like VV93_RS02125 59bcf19787353b4c0c601ad2e32be095 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 1.9E-9 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like VV93_RS02125 59bcf19787353b4c0c601ad2e32be095 91 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 23-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VV93_RS02125 59bcf19787353b4c0c601ad2e32be095 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 84 5.3E-23 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like VV93_RS02125 59bcf19787353b4c0c601ad2e32be095 91 Pfam PF00381 PTS HPr component phosphorylation site 4 84 2.4E-23 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like VV93_RS02125 59bcf19787353b4c0c601ad2e32be095 91 PANTHER PTHR33705 1 91 4.9E-37 T 23-04-2016 VV93_RS01300 f264debd57b2a1be53898b43da2e1e64 77 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 26 75 8.5E-10 T 23-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) VV93_RS14315 7cb2cc88e29d8f5dd9489e72a587949b 295 PANTHER PTHR22911:SF64 1 294 6.3E-94 T 23-04-2016 VV93_RS14315 7cb2cc88e29d8f5dd9489e72a587949b 295 PANTHER PTHR22911 1 294 6.3E-94 T 23-04-2016 VV93_RS14315 7cb2cc88e29d8f5dd9489e72a587949b 295 SUPERFAMILY SSF103481 36 140 1.44E-12 T 23-04-2016 VV93_RS14315 7cb2cc88e29d8f5dd9489e72a587949b 295 SUPERFAMILY SSF103481 217 294 4.97E-11 T 23-04-2016 VV93_RS14315 7cb2cc88e29d8f5dd9489e72a587949b 295 Pfam PF00892 EamA-like transporter family 156 294 6.7E-17 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VV93_RS14315 7cb2cc88e29d8f5dd9489e72a587949b 295 Pfam PF00892 EamA-like transporter family 5 135 3.5E-15 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VV93_RS12400 a4b3a6f79011e29fb0eeb229189ae63b 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 253 6.6E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS12400 a4b3a6f79011e29fb0eeb229189ae63b 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 342 537 2.4E-6 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS12400 a4b3a6f79011e29fb0eeb229189ae63b 541 SUPERFAMILY SSF161098 281 535 3.01E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS12400 a4b3a6f79011e29fb0eeb229189ae63b 541 SUPERFAMILY SSF161098 9 258 7.98E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS12400 a4b3a6f79011e29fb0eeb229189ae63b 541 PANTHER PTHR30183 407 541 2.1E-276 T 23-04-2016 VV93_RS12400 a4b3a6f79011e29fb0eeb229189ae63b 541 PANTHER PTHR30183 2 390 2.1E-276 T 23-04-2016 VV93_RS12400 a4b3a6f79011e29fb0eeb229189ae63b 541 PANTHER PTHR30183:SF2 407 541 2.1E-276 T 23-04-2016 VV93_RS12400 a4b3a6f79011e29fb0eeb229189ae63b 541 PANTHER PTHR30183:SF2 2 390 2.1E-276 T 23-04-2016 VV93_RS12400 a4b3a6f79011e29fb0eeb229189ae63b 541 Gene3D G3DSA:1.10.3720.10 13 263 2.3E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS12400 a4b3a6f79011e29fb0eeb229189ae63b 541 Gene3D G3DSA:1.10.3720.10 290 536 2.8E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS08720 b7718191d41d5f21f48c6cb639fae35e 512 Gene3D G3DSA:1.20.200.10 198 494 4.6E-128 T 23-04-2016 VV93_RS08720 b7718191d41d5f21f48c6cb639fae35e 512 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 23-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 VV93_RS08720 b7718191d41d5f21f48c6cb639fae35e 512 SUPERFAMILY SSF48557 5 508 5.26E-193 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 VV93_RS08720 b7718191d41d5f21f48c6cb639fae35e 512 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.484 T 23-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VV93_RS08720 b7718191d41d5f21f48c6cb639fae35e 512 PANTHER PTHR10362 11 494 6.0E-253 T 23-04-2016 VV93_RS08720 b7718191d41d5f21f48c6cb639fae35e 512 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 503 6.2E-216 T 23-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VV93_RS08720 b7718191d41d5f21f48c6cb639fae35e 512 Gene3D G3DSA:1.10.275.10 4 197 2.0E-74 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal VV93_RS08720 b7718191d41d5f21f48c6cb639fae35e 512 Pfam PF00221 Aromatic amino acid lyase 11 471 2.2E-188 T 23-04-2016 IPR001106 Aromatic amino acid lyase VV93_RS11690 78701e5fd05edd34c663d24a8a0cb4ad 260 SUPERFAMILY SSF111364 29 260 2.35E-78 T 23-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VV93_RS11690 78701e5fd05edd34c663d24a8a0cb4ad 260 Gene3D G3DSA:2.40.230.20 28 260 1.8E-87 T 23-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VV93_RS11690 78701e5fd05edd34c663d24a8a0cb4ad 260 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 29 260 1.2E-92 T 23-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VV93_RS12205 a0606f8e5638701e386610cb7016c917 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 2.0E-30 T 23-04-2016 VV93_RS12205 a0606f8e5638701e386610cb7016c917 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 2.7E-38 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 VV93_RS12205 a0606f8e5638701e386610cb7016c917 89 Pfam PF00312 Ribosomal protein S15 8 88 3.8E-36 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS12205 a0606f8e5638701e386610cb7016c917 89 Gene3D G3DSA:1.10.287.10 3 89 2.0E-38 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 VV93_RS12205 a0606f8e5638701e386610cb7016c917 89 SUPERFAMILY SSF47060 3 89 1.35E-34 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 VV93_RS12205 a0606f8e5638701e386610cb7016c917 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.574 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 VV93_RS12205 a0606f8e5638701e386610cb7016c917 89 SMART SM01387 8 88 5.8E-52 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS12205 a0606f8e5638701e386610cb7016c917 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS12205 a0606f8e5638701e386610cb7016c917 89 PANTHER PTHR23321 1 89 1.5E-45 T 23-04-2016 VV93_RS12370 96b8e41ea90bb6549ce78553d1be7b99 573 Pfam PF02927 Cellulase N-terminal ig-like domain 5 83 6.7E-9 T 23-04-2016 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 VV93_RS12370 96b8e41ea90bb6549ce78553d1be7b99 573 Gene3D G3DSA:1.50.10.10 98 562 5.1E-66 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 VV93_RS12370 96b8e41ea90bb6549ce78553d1be7b99 573 SUPERFAMILY SSF81296 2 90 4.13E-14 T 23-04-2016 IPR014756 Immunoglobulin E-set VV93_RS12370 96b8e41ea90bb6549ce78553d1be7b99 573 Pfam PF00759 Glycosyl hydrolase family 9 98 500 7.9E-24 T 23-04-2016 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VV93_RS12370 96b8e41ea90bb6549ce78553d1be7b99 573 SUPERFAMILY SSF48208 78 566 6.8E-95 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 VV93_RS12370 96b8e41ea90bb6549ce78553d1be7b99 573 Gene3D G3DSA:2.60.40.10 5 91 4.1E-14 T 23-04-2016 IPR013783 Immunoglobulin-like fold VV93_RS00555 315db0fadeb7a94d91df6791d4181ff5 197 PANTHER PTHR18895 3 197 3.0E-52 T 23-04-2016 VV93_RS00555 315db0fadeb7a94d91df6791d4181ff5 197 PANTHER PTHR18895:SF60 3 197 3.0E-52 T 23-04-2016 VV93_RS00555 315db0fadeb7a94d91df6791d4181ff5 197 Gene3D G3DSA:3.40.50.150 11 196 1.7E-69 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS00555 315db0fadeb7a94d91df6791d4181ff5 197 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV93_RS00555 315db0fadeb7a94d91df6791d4181ff5 197 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 16 196 1.2E-61 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS00555 315db0fadeb7a94d91df6791d4181ff5 197 PIRSF PIRSF004553 18 197 4.7E-56 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VV93_RS00555 315db0fadeb7a94d91df6791d4181ff5 197 Pfam PF03602 Conserved hypothetical protein 95 19 195 9.2E-63 T 23-04-2016 VV93_RS00555 315db0fadeb7a94d91df6791d4181ff5 197 SUPERFAMILY SSF53335 19 195 5.08E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS13910 f88522e7e0a3de119e15fc5aadb757c7 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 5.5E-35 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13910 f88522e7e0a3de119e15fc5aadb757c7 73 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.1E-23 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13910 f88522e7e0a3de119e15fc5aadb757c7 73 PRINTS PR01249 Ribosomal protein L31 signature 32 47 7.1E-23 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13910 f88522e7e0a3de119e15fc5aadb757c7 73 PRINTS PR01249 Ribosomal protein L31 signature 47 65 7.1E-23 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13910 f88522e7e0a3de119e15fc5aadb757c7 73 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 31.851 T 23-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13910 f88522e7e0a3de119e15fc5aadb757c7 73 Pfam PF01197 Ribosomal protein L31 1 66 4.5E-32 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13910 f88522e7e0a3de119e15fc5aadb757c7 73 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS13910 f88522e7e0a3de119e15fc5aadb757c7 73 PANTHER PTHR33280 1 66 7.6E-38 T 23-04-2016 VV93_RS13910 f88522e7e0a3de119e15fc5aadb757c7 73 SUPERFAMILY SSF143800 1 68 1.57E-27 T 23-04-2016 VV93_RS13910 f88522e7e0a3de119e15fc5aadb757c7 73 PANTHER PTHR33280:SF2 1 66 7.6E-38 T 23-04-2016 VV93_RS06295 817a27a5f974227cac0ca8b8eab4db66 272 SUPERFAMILY SSF52540 5 253 1.74E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06295 817a27a5f974227cac0ca8b8eab4db66 272 PANTHER PTHR24220:SF336 6 265 1.6E-137 T 23-04-2016 VV93_RS06295 817a27a5f974227cac0ca8b8eab4db66 272 Gene3D G3DSA:3.40.50.300 3 255 4.5E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06295 817a27a5f974227cac0ca8b8eab4db66 272 Pfam PF00005 ABC transporter 31 180 5.3E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS06295 817a27a5f974227cac0ca8b8eab4db66 272 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV93_RS06295 817a27a5f974227cac0ca8b8eab4db66 272 SMART SM00382 39 239 7.4E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS06295 817a27a5f974227cac0ca8b8eab4db66 272 PANTHER PTHR24220 6 265 1.6E-137 T 23-04-2016 VV93_RS00540 cee0305e2caa23656aebb6e65f331949 73 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 73 2.5E-24 T 23-04-2016 IPR019620 Putative metal-binding protein VV93_RS00540 cee0305e2caa23656aebb6e65f331949 73 Pfam PF10678 Protein of unknown function (DUF2492) 2 72 1.8E-23 T 23-04-2016 IPR019620 Putative metal-binding protein VV93_RS11455 3df6295b0c6af17d3ab6fb8f40e9d842 280 PANTHER PTHR13773:SF0 1 280 5.5E-78 T 23-04-2016 VV93_RS11455 3df6295b0c6af17d3ab6fb8f40e9d842 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 23-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 VV93_RS11455 3df6295b0c6af17d3ab6fb8f40e9d842 280 PANTHER PTHR13773 1 280 5.5E-78 T 23-04-2016 VV93_RS11455 3df6295b0c6af17d3ab6fb8f40e9d842 280 Pfam PF01148 Cytidylyltransferase family 2 280 7.2E-68 T 23-04-2016 VV93_RS02610 4bce0595e48c0848885869d870f5d21e 160 SUPERFAMILY SSF55083 1 149 4.97E-38 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VV93_RS02610 4bce0595e48c0848885869d870f5d21e 160 PANTHER PTHR20941 1 158 4.4E-58 T 23-04-2016 VV93_RS02610 4bce0595e48c0848885869d870f5d21e 160 PANTHER PTHR20941:SF12 1 158 4.4E-58 T 23-04-2016 VV93_RS02610 4bce0595e48c0848885869d870f5d21e 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 129 2.1E-29 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VV93_RS02610 4bce0595e48c0848885869d870f5d21e 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 6.3E-25 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VV93_RS02610 4bce0595e48c0848885869d870f5d21e 160 Gene3D G3DSA:3.30.70.560 3 148 1.8E-38 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VV93_RS02545 08d1a84d5b7bebd7c0fb7621879de321 214 Pfam PF11726 Protein of unknown function (DUF3296) 35 209 2.1E-39 T 23-04-2016 IPR021723 Inovirus Gp2 VV93_RS06585 2583c7a597ce1ce5cc145b905f40e89f 59 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 8.5E-26 T 23-04-2016 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE VV93_RS06585 2583c7a597ce1ce5cc145b905f40e89f 59 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 9 57 7.9E-30 T 23-04-2016 IPR014316 Trimethylamine N-oxide reductase system, TorE VV93_RS11840 d00f80035eeccb66f430860ba127e971 110 SUPERFAMILY SSF50249 8 109 6.61E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS11840 d00f80035eeccb66f430860ba127e971 110 Gene3D G3DSA:2.40.50.140 2 109 1.5E-37 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS11840 d00f80035eeccb66f430860ba127e971 110 Pfam PF01588 Putative tRNA binding domain 14 107 9.9E-30 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 VV93_RS11840 d00f80035eeccb66f430860ba127e971 110 PANTHER PTHR11586 1 110 1.2E-69 T 23-04-2016 VV93_RS11840 d00f80035eeccb66f430860ba127e971 110 PANTHER PTHR11586:SF19 1 110 1.2E-69 T 23-04-2016 VV93_RS05600 ad39936d51f18394c9b30cce865234ae 478 Pfam PF03553 Na+/H+ antiporter family 161 453 9.5E-66 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VV93_RS05600 ad39936d51f18394c9b30cce865234ae 478 PANTHER PTHR33451:SF1 1 477 0.0 T 23-04-2016 VV93_RS05600 ad39936d51f18394c9b30cce865234ae 478 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 2.3E-162 T 23-04-2016 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 VV93_RS05600 ad39936d51f18394c9b30cce865234ae 478 PANTHER PTHR33451 1 477 0.0 T 23-04-2016 VV93_RS04555 95b9670cfe68907bb6694ab74ab9ef81 308 Pfam PF01584 CheW-like domain 21 155 8.3E-35 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VV93_RS04555 95b9670cfe68907bb6694ab74ab9ef81 308 PANTHER PTHR22617 1 169 9.5E-106 T 23-04-2016 VV93_RS04555 95b9670cfe68907bb6694ab74ab9ef81 308 Pfam PF00072 Response regulator receiver domain 184 302 8.3E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS04555 95b9670cfe68907bb6694ab74ab9ef81 308 SMART SM00448 182 302 2.0E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS04555 95b9670cfe68907bb6694ab74ab9ef81 308 SUPERFAMILY SSF52172 183 306 5.55E-26 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS04555 95b9670cfe68907bb6694ab74ab9ef81 308 PIRSF PIRSF002867 1 308 2.1E-103 T 23-04-2016 IPR024181 Chemotaxis response regulator CheV VV93_RS04555 95b9670cfe68907bb6694ab74ab9ef81 308 PANTHER PTHR22617:SF30 1 169 9.5E-106 T 23-04-2016 VV93_RS04555 95b9670cfe68907bb6694ab74ab9ef81 308 SMART SM00260 17 153 6.3E-26 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VV93_RS04555 95b9670cfe68907bb6694ab74ab9ef81 308 Gene3D G3DSA:3.40.50.2300 182 307 1.3E-27 T 23-04-2016 VV93_RS04555 95b9670cfe68907bb6694ab74ab9ef81 308 SUPERFAMILY SSF50341 16 157 1.26E-35 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VV93_RS15145 6d42fea9643003966f3309a3df30b8a9 94 Pfam PF13710 ACT domain 12 73 6.8E-21 T 23-04-2016 VV93_RS15145 6d42fea9643003966f3309a3df30b8a9 94 Gene3D G3DSA:3.30.70.260 1 76 8.2E-12 T 23-04-2016 VV93_RS15145 6d42fea9643003966f3309a3df30b8a9 94 SUPERFAMILY SSF55021 3 76 1.33E-10 T 23-04-2016 VV93_RS15145 6d42fea9643003966f3309a3df30b8a9 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 70 9.0E-4 T 23-04-2016 VV93_RS12775 7bba8ec61468c4a03c71d7d02596cbb0 237 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 231 2.5E-80 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS12775 7bba8ec61468c4a03c71d7d02596cbb0 237 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 106 113 - T 23-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS12775 7bba8ec61468c4a03c71d7d02596cbb0 237 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 230 7.4E-77 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS12775 7bba8ec61468c4a03c71d7d02596cbb0 237 PANTHER PTHR32125 1 236 3.2E-83 T 23-04-2016 VV93_RS12775 7bba8ec61468c4a03c71d7d02596cbb0 237 Gene3D G3DSA:3.90.550.10 3 235 4.4E-78 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS12775 7bba8ec61468c4a03c71d7d02596cbb0 237 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 233 32.539 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VV93_RS12775 7bba8ec61468c4a03c71d7d02596cbb0 237 PANTHER PTHR32125:SF4 1 236 3.2E-83 T 23-04-2016 VV93_RS12775 7bba8ec61468c4a03c71d7d02596cbb0 237 SUPERFAMILY SSF53448 8 231 2.71E-63 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VV93_RS11160 3a4d83a98f16ada80f13d1947bf8c5f2 467 SUPERFAMILY SSF56349 233 447 7.06E-24 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS11160 3a4d83a98f16ada80f13d1947bf8c5f2 467 SUPERFAMILY SSF56349 161 196 7.06E-24 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS11160 3a4d83a98f16ada80f13d1947bf8c5f2 467 Gene3D G3DSA:1.10.443.10 263 447 3.0E-24 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS11160 3a4d83a98f16ada80f13d1947bf8c5f2 467 Pfam PF00589 Phage integrase family 251 443 2.1E-15 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS11160 3a4d83a98f16ada80f13d1947bf8c5f2 467 PANTHER PTHR30349 269 447 1.4E-12 T 23-04-2016 VV93_RS11160 3a4d83a98f16ada80f13d1947bf8c5f2 467 PANTHER PTHR30349:SF20 269 447 1.4E-12 T 23-04-2016 VV93_RS03865 75f1cbcc8c11661418ed4f5bdd61978f 119 PANTHER PTHR37482:SF1 1 118 1.2E-48 T 23-04-2016 VV93_RS03865 75f1cbcc8c11661418ed4f5bdd61978f 119 Pfam PF04355 SmpA / OmlA family 35 102 4.9E-26 T 23-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 VV93_RS03865 75f1cbcc8c11661418ed4f5bdd61978f 119 PANTHER PTHR37482 1 118 1.2E-48 T 23-04-2016 VV93_RS03865 75f1cbcc8c11661418ed4f5bdd61978f 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 32.249 T 23-04-2016 IPR026592 Outer membrane protein assembly factor BamE VV93_RS12510 98c3458647a3ab4bf260dcb6231b1548 222 Gene3D G3DSA:3.40.1050.10 1 213 2.6E-75 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VV93_RS12510 98c3458647a3ab4bf260dcb6231b1548 222 PANTHER PTHR11002 1 207 6.0E-132 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VV93_RS12510 98c3458647a3ab4bf260dcb6231b1548 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 23-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VV93_RS12510 98c3458647a3ab4bf260dcb6231b1548 222 PANTHER PTHR11002:SF11 1 207 6.0E-132 T 23-04-2016 VV93_RS12510 98c3458647a3ab4bf260dcb6231b1548 222 SUPERFAMILY SSF53056 2 212 2.49E-73 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VV93_RS12510 98c3458647a3ab4bf260dcb6231b1548 222 SMART SM00947 30 192 2.2E-63 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VV93_RS12510 98c3458647a3ab4bf260dcb6231b1548 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 23-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VV93_RS12510 98c3458647a3ab4bf260dcb6231b1548 222 Pfam PF00484 Carbonic anhydrase 38 188 1.8E-48 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VV93_RS14135 f4f72f905f31472d7089ca39159df1cf 1102 PANTHER PTHR33607 584 820 2.7E-78 T 23-04-2016 VV93_RS14135 f4f72f905f31472d7089ca39159df1cf 1102 PANTHER PTHR33607 925 945 2.7E-78 T 23-04-2016 VV93_RS14135 f4f72f905f31472d7089ca39159df1cf 1102 PANTHER PTHR33607 843 904 2.7E-78 T 23-04-2016 VV93_RS14135 f4f72f905f31472d7089ca39159df1cf 1102 PANTHER PTHR33607 225 365 2.7E-78 T 23-04-2016 VV93_RS14135 f4f72f905f31472d7089ca39159df1cf 1102 PANTHER PTHR33607 416 564 2.7E-78 T 23-04-2016 VV93_RS14135 f4f72f905f31472d7089ca39159df1cf 1102 Gene3D G3DSA:3.60.10.10 559 944 7.4E-13 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VV93_RS14135 f4f72f905f31472d7089ca39159df1cf 1102 PANTHER PTHR33607:SF1 584 820 2.7E-78 T 23-04-2016 VV93_RS14135 f4f72f905f31472d7089ca39159df1cf 1102 PANTHER PTHR33607:SF1 925 945 2.7E-78 T 23-04-2016 VV93_RS14135 f4f72f905f31472d7089ca39159df1cf 1102 PANTHER PTHR33607:SF1 843 904 2.7E-78 T 23-04-2016 VV93_RS14135 f4f72f905f31472d7089ca39159df1cf 1102 PANTHER PTHR33607:SF1 225 365 2.7E-78 T 23-04-2016 VV93_RS14135 f4f72f905f31472d7089ca39159df1cf 1102 PANTHER PTHR33607:SF1 416 564 2.7E-78 T 23-04-2016 VV93_RS14135 f4f72f905f31472d7089ca39159df1cf 1102 SUPERFAMILY SSF56219 554 944 5.44E-25 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VV93_RS03285 7f29312e7058310883f865e3441d42e9 239 PANTHER PTHR30616:SF3 2 239 3.4E-122 T 23-04-2016 VV93_RS03285 7f29312e7058310883f865e3441d42e9 239 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 29 238 3.9E-58 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase VV93_RS03285 7f29312e7058310883f865e3441d42e9 239 Gene3D G3DSA:3.60.140.10 2 238 2.9E-91 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase VV93_RS03285 7f29312e7058310883f865e3441d42e9 239 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 18 237 1.1E-69 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase VV93_RS03285 7f29312e7058310883f865e3441d42e9 239 SUPERFAMILY SSF64438 2 239 1.34E-83 T 23-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic VV93_RS03285 7f29312e7058310883f865e3441d42e9 239 PANTHER PTHR30616 2 239 3.4E-122 T 23-04-2016 VV93_RS03905 f4e4cdd34b050af1a2db763e638961de 392 Gene3D G3DSA:2.40.160.10 31 368 1.1E-15 T 23-04-2016 IPR023614 Porin domain VV93_RS03905 f4e4cdd34b050af1a2db763e638961de 392 SUPERFAMILY SSF56935 49 384 2.75E-17 T 23-04-2016 VV93_RS11375 873d7f1a3b94c1b788230a07cd29aba8 229 Pfam PF06930 Protein of unknown function (DUF1282) 14 224 2.1E-57 T 23-04-2016 IPR009698 Protein of unknown function DUF1282 VV93_RS06190 8a29465d2b003250a380c064502ab24a 486 PANTHER PTHR11616:SF11 1 474 3.6E-181 T 23-04-2016 VV93_RS06190 8a29465d2b003250a380c064502ab24a 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 1.2E-36 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS06190 8a29465d2b003250a380c064502ab24a 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 1.2E-36 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS06190 8a29465d2b003250a380c064502ab24a 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 1.2E-36 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS06190 8a29465d2b003250a380c064502ab24a 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 1.2E-36 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS06190 8a29465d2b003250a380c064502ab24a 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 1.2E-36 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS06190 8a29465d2b003250a380c064502ab24a 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 1.2E-36 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS06190 8a29465d2b003250a380c064502ab24a 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 1.2E-36 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS06190 8a29465d2b003250a380c064502ab24a 486 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS06190 8a29465d2b003250a380c064502ab24a 486 SUPERFAMILY SSF161070 3 472 2.62E-148 T 23-04-2016 VV93_RS06190 8a29465d2b003250a380c064502ab24a 486 Pfam PF00209 Sodium:neurotransmitter symporter family 3 120 9.0E-41 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS06190 8a29465d2b003250a380c064502ab24a 486 Pfam PF00209 Sodium:neurotransmitter symporter family 121 468 7.5E-77 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS06190 8a29465d2b003250a380c064502ab24a 486 PANTHER PTHR11616 1 474 3.6E-181 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS06975 c201e01cf666b3e37bdc65666493e204 364 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 191 210 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VV93_RS06975 c201e01cf666b3e37bdc65666493e204 364 SUPERFAMILY SSF53383 8 362 1.16E-119 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS06975 c201e01cf666b3e37bdc65666493e204 364 PANTHER PTHR21152:SF1 1 363 7.2E-188 T 23-04-2016 VV93_RS06975 c201e01cf666b3e37bdc65666493e204 364 PIRSF PIRSF000525 2 364 4.1E-155 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 VV93_RS06975 c201e01cf666b3e37bdc65666493e204 364 PANTHER PTHR21152 1 363 7.2E-188 T 23-04-2016 VV93_RS06975 c201e01cf666b3e37bdc65666493e204 364 Gene3D G3DSA:3.90.1150.10 262 363 1.9E-44 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS06975 c201e01cf666b3e37bdc65666493e204 364 Gene3D G3DSA:3.40.640.10 21 261 8.9E-105 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS06975 c201e01cf666b3e37bdc65666493e204 364 Pfam PF00266 Aminotransferase class-V 8 352 1.2E-65 T 23-04-2016 IPR000192 Aminotransferase class V domain VV93_RS06975 c201e01cf666b3e37bdc65666493e204 364 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 8 362 6.9E-164 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 VV93_RS06975 c201e01cf666b3e37bdc65666493e204 364 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 6 363 52.349 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 VV93_RS08850 ae10b670b825619efa03bb17e35fbb50 262 Gene3D G3DSA:1.10.357.10 23 193 1.7E-17 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VV93_RS08850 ae10b670b825619efa03bb17e35fbb50 262 Pfam PF00440 Bacterial regulatory proteins, tetR family 39 81 1.1E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV93_RS08850 ae10b670b825619efa03bb17e35fbb50 262 SUPERFAMILY SSF46689 28 86 2.0E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 VV93_RS11575 dd8e2672dad18edef4ab2ba6b2ff8d85 454 PANTHER PTHR11616:SF167 10 453 8.4E-177 T 23-04-2016 VV93_RS11575 dd8e2672dad18edef4ab2ba6b2ff8d85 454 Pfam PF00209 Sodium:neurotransmitter symporter family 156 452 1.2E-25 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS11575 dd8e2672dad18edef4ab2ba6b2ff8d85 454 Pfam PF00209 Sodium:neurotransmitter symporter family 10 138 1.5E-21 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS11575 dd8e2672dad18edef4ab2ba6b2ff8d85 454 PANTHER PTHR11616 10 453 8.4E-177 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS11575 dd8e2672dad18edef4ab2ba6b2ff8d85 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.7E-10 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS11575 dd8e2672dad18edef4ab2ba6b2ff8d85 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 333 1.7E-10 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS11575 dd8e2672dad18edef4ab2ba6b2ff8d85 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.7E-10 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS11575 dd8e2672dad18edef4ab2ba6b2ff8d85 454 SUPERFAMILY SSF161070 10 453 5.23E-118 T 23-04-2016 VV93_RS04465 bc170993f59b18e35cc9ee20ae2aa17e 193 SUPERFAMILY SSF160443 93 174 3.92E-13 T 23-04-2016 IPR002625 Smr domain VV93_RS04465 bc170993f59b18e35cc9ee20ae2aa17e 193 SMART SM00463 92 175 1.0E-12 T 23-04-2016 IPR002625 Smr domain VV93_RS04465 bc170993f59b18e35cc9ee20ae2aa17e 193 PANTHER PTHR35562:SF2 4 185 1.3E-74 T 23-04-2016 VV93_RS04465 bc170993f59b18e35cc9ee20ae2aa17e 193 PANTHER PTHR35562 4 185 1.3E-74 T 23-04-2016 VV93_RS04465 bc170993f59b18e35cc9ee20ae2aa17e 193 Pfam PF01713 Smr domain 95 174 5.8E-18 T 23-04-2016 IPR002625 Smr domain VV93_RS12200 61351372bc7721f3beeb9b4e9cea1a28 1180 Pfam PF05488 PAAR motif 18 86 7.5E-23 T 23-04-2016 IPR008727 PAAR motif VV93_RS07430 dab0c4f54cbc9acbf5d972034332f2c3 421 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 9 415 9.7E-120 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 VV93_RS07430 dab0c4f54cbc9acbf5d972034332f2c3 421 Pfam PF02321 Outer membrane efflux protein 217 401 2.8E-30 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VV93_RS07430 dab0c4f54cbc9acbf5d972034332f2c3 421 Pfam PF02321 Outer membrane efflux protein 11 195 2.1E-22 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VV93_RS07430 dab0c4f54cbc9acbf5d972034332f2c3 421 SUPERFAMILY SSF56954 10 415 9.42E-88 T 23-04-2016 VV93_RS07430 dab0c4f54cbc9acbf5d972034332f2c3 421 PANTHER PTHR30026:SF4 1 421 1.9E-102 T 23-04-2016 VV93_RS07430 dab0c4f54cbc9acbf5d972034332f2c3 421 Gene3D G3DSA:1.20.1600.10 7 404 3.1E-64 T 23-04-2016 VV93_RS07430 dab0c4f54cbc9acbf5d972034332f2c3 421 PANTHER PTHR30026 1 421 1.9E-102 T 23-04-2016 VV93_RS13875 813c8f176dcf4d2fea282da9d65ed7e7 877 SUPERFAMILY SSF51621 6 877 0.0 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VV93_RS13875 813c8f176dcf4d2fea282da9d65ed7e7 877 PANTHER PTHR30523 1 877 0.0 T 23-04-2016 VV93_RS13875 813c8f176dcf4d2fea282da9d65ed7e7 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.4E-66 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV93_RS13875 813c8f176dcf4d2fea282da9d65ed7e7 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 1.4E-66 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV93_RS13875 813c8f176dcf4d2fea282da9d65ed7e7 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.4E-66 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV93_RS13875 813c8f176dcf4d2fea282da9d65ed7e7 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 1.4E-66 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV93_RS13875 813c8f176dcf4d2fea282da9d65ed7e7 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 1.4E-66 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV93_RS13875 813c8f176dcf4d2fea282da9d65ed7e7 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.4E-66 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV93_RS13875 813c8f176dcf4d2fea282da9d65ed7e7 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 1.4E-66 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV93_RS13875 813c8f176dcf4d2fea282da9d65ed7e7 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 4.8E-287 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV93_RS13875 813c8f176dcf4d2fea282da9d65ed7e7 877 PANTHER PTHR30523:SF3 1 877 0.0 T 23-04-2016 VV93_RS13875 813c8f176dcf4d2fea282da9d65ed7e7 877 Gene3D G3DSA:1.20.1440.90 273 387 3.3E-31 T 23-04-2016 VV93_RS13875 813c8f176dcf4d2fea282da9d65ed7e7 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 17.922 T 23-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV93_RS13875 813c8f176dcf4d2fea282da9d65ed7e7 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 23-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV93_RS13875 813c8f176dcf4d2fea282da9d65ed7e7 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 23-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV93_RS08960 b24599b7bd3e54065d69c2abe7e5a2c3 195 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 31.967 T 23-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 VV93_RS08960 b24599b7bd3e54065d69c2abe7e5a2c3 195 PANTHER PTHR10204 1 195 1.6E-88 T 23-04-2016 VV93_RS08960 b24599b7bd3e54065d69c2abe7e5a2c3 195 SUPERFAMILY SSF52218 1 193 5.28E-52 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS08960 b24599b7bd3e54065d69c2abe7e5a2c3 195 Pfam PF02525 Flavodoxin-like fold 3 190 3.5E-44 T 23-04-2016 IPR003680 Flavodoxin-like fold VV93_RS08960 b24599b7bd3e54065d69c2abe7e5a2c3 195 PANTHER PTHR10204:SF16 1 195 1.6E-88 T 23-04-2016 VV93_RS08960 b24599b7bd3e54065d69c2abe7e5a2c3 195 Gene3D G3DSA:3.40.50.360 1 193 7.1E-63 T 23-04-2016 IPR029039 Flavoprotein-like domain VV93_RS13505 fad8348d8ba2d4f29bab5bd01305fdf8 229 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 4.3E-5 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS13505 fad8348d8ba2d4f29bab5bd01305fdf8 229 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site VV93_RS06410 d7145e6c6f1fdae8032b4af7ed401095 430 PANTHER PTHR10742:SF275 1 416 5.9E-212 T 23-04-2016 VV93_RS06410 d7145e6c6f1fdae8032b4af7ed401095 430 Pfam PF01593 Flavin containing amine oxidoreductase 10 297 2.4E-19 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 VV93_RS06410 d7145e6c6f1fdae8032b4af7ed401095 430 SUPERFAMILY SSF51905 382 413 2.3E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS06410 d7145e6c6f1fdae8032b4af7ed401095 430 SUPERFAMILY SSF51905 1 299 2.3E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS06410 d7145e6c6f1fdae8032b4af7ed401095 430 Gene3D G3DSA:3.50.50.60 1 117 4.0E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS06410 d7145e6c6f1fdae8032b4af7ed401095 430 Gene3D G3DSA:3.50.50.60 200 298 4.0E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS06410 d7145e6c6f1fdae8032b4af7ed401095 430 PANTHER PTHR10742 1 416 5.9E-212 T 23-04-2016 VV93_RS14660 37aa2bbd332b2b09ba2d51e4be4d9bd3 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 5.8E-30 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 VV93_RS14660 37aa2bbd332b2b09ba2d51e4be4d9bd3 122 SUPERFAMILY SSF54736 51 122 2.09E-24 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VV93_RS14660 37aa2bbd332b2b09ba2d51e4be4d9bd3 122 Gene3D G3DSA:1.20.5.710 2 51 3.6E-22 T 23-04-2016 VV93_RS14660 37aa2bbd332b2b09ba2d51e4be4d9bd3 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.77 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS14660 37aa2bbd332b2b09ba2d51e4be4d9bd3 122 SUPERFAMILY SSF48300 4 58 1.31E-15 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS14660 37aa2bbd332b2b09ba2d51e4be4d9bd3 122 Gene3D G3DSA:3.30.1390.10 52 122 6.8E-33 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VV93_RS14660 37aa2bbd332b2b09ba2d51e4be4d9bd3 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 1.5E-16 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS14660 37aa2bbd332b2b09ba2d51e4be4d9bd3 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 93 2.0E-12 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 VV93_RS14660 37aa2bbd332b2b09ba2d51e4be4d9bd3 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 1.8E-46 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS11505 0ac6c86fdf010f3916b2f7a7ba9da811 104 Gene3D G3DSA:1.20.1440.40 1 102 4.0E-32 T 23-04-2016 IPR023376 YqcC-like domain VV93_RS11505 0ac6c86fdf010f3916b2f7a7ba9da811 104 SUPERFAMILY SSF158452 1 102 2.22E-32 T 23-04-2016 IPR023376 YqcC-like domain VV93_RS11505 0ac6c86fdf010f3916b2f7a7ba9da811 104 Pfam PF04287 tRNA pseudouridine synthase C 8 101 2.6E-30 T 23-04-2016 IPR023376 YqcC-like domain VV93_RS11505 0ac6c86fdf010f3916b2f7a7ba9da811 104 PIRSF PIRSF006257 1 104 1.6E-40 T 23-04-2016 IPR007384 Protein of unknown function UCP006257 VV93_RS14065 5c1c1e7a2b4c96d7c95a69b258b69cfa 68 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 4 62 4.8E-32 T 23-04-2016 IPR012658 Conserved hypothetical protein CHP02443 VV93_RS14065 5c1c1e7a2b4c96d7c95a69b258b69cfa 68 Pfam PF09526 Probable metal-binding protein (DUF2387) 6 55 6.5E-20 T 23-04-2016 IPR012658 Conserved hypothetical protein CHP02443 VV93_RS20765 9b577209ff79b960512e1e6dcf104b0c 124 SUPERFAMILY SSF48168 1 46 1.83E-12 T 23-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VV93_RS20765 9b577209ff79b960512e1e6dcf104b0c 124 SUPERFAMILY SSF51998 47 124 8.85E-21 T 23-04-2016 VV93_RS20765 9b577209ff79b960512e1e6dcf104b0c 124 Gene3D G3DSA:3.20.70.20 12 123 4.6E-11 T 23-04-2016 VV93_RS20765 9b577209ff79b960512e1e6dcf104b0c 124 PANTHER PTHR11573:SF17 1 124 2.3E-104 T 23-04-2016 VV93_RS20765 9b577209ff79b960512e1e6dcf104b0c 124 PANTHER PTHR11573 1 124 2.3E-104 T 23-04-2016 VV93_RS20765 9b577209ff79b960512e1e6dcf104b0c 124 Pfam PF02867 Ribonucleotide reductase, barrel domain 48 123 1.6E-16 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV93_RS02310 3cf7bfe01bcad443e9f603a1b0d63ac3 287 SMART SM00271 220 285 5.1E-20 T 23-04-2016 IPR001623 DnaJ domain VV93_RS02310 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Gene3D G3DSA:1.10.3680.10 20 185 2.7E-40 T 23-04-2016 IPR029024 TerB-like VV93_RS02310 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Gene3D G3DSA:1.10.3680.10 219 224 2.7E-40 T 23-04-2016 IPR029024 TerB-like VV93_RS02310 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Pfam PF05099 Tellurite resistance protein TerB 46 177 3.5E-18 T 23-04-2016 IPR007791 Co-chaperone DjlA, N-terminal VV93_RS02310 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Gene3D G3DSA:1.10.287.110 225 283 9.9E-16 T 23-04-2016 IPR001623 DnaJ domain VV93_RS02310 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Hamap MF_01153 DnaJ-like protein DjlA [djlA]. 1 287 41.489 T 23-04-2016 IPR023749 Co-chaperone DjlA GO:0051087 VV93_RS02310 3cf7bfe01bcad443e9f603a1b0d63ac3 287 SUPERFAMILY SSF46565 138 283 4.81E-32 T 23-04-2016 IPR001623 DnaJ domain VV93_RS02310 3cf7bfe01bcad443e9f603a1b0d63ac3 287 PRINTS PR00625 DnaJ domain signature 241 256 6.0E-11 T 23-04-2016 IPR001623 DnaJ domain VV93_RS02310 3cf7bfe01bcad443e9f603a1b0d63ac3 287 PRINTS PR00625 DnaJ domain signature 223 241 6.0E-11 T 23-04-2016 IPR001623 DnaJ domain VV93_RS02310 3cf7bfe01bcad443e9f603a1b0d63ac3 287 PRINTS PR00625 DnaJ domain signature 265 285 6.0E-11 T 23-04-2016 IPR001623 DnaJ domain VV93_RS02310 3cf7bfe01bcad443e9f603a1b0d63ac3 287 SUPERFAMILY SSF158682 48 181 1.75E-23 T 23-04-2016 IPR029024 TerB-like VV93_RS02310 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Pfam PF00226 DnaJ domain 221 283 4.9E-13 T 23-04-2016 IPR001623 DnaJ domain VV93_RS03670 42caa6ba60ba1e4fd39e871051e38dd2 197 PANTHER PTHR30178 1 195 8.1E-137 T 23-04-2016 VV93_RS03670 42caa6ba60ba1e4fd39e871051e38dd2 197 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 23-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VV93_RS03670 42caa6ba60ba1e4fd39e871051e38dd2 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 175 6.4E-36 T 23-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VV93_RS03670 42caa6ba60ba1e4fd39e871051e38dd2 197 PANTHER PTHR30178:SF6 1 195 8.1E-137 T 23-04-2016 VV93_RS11380 6a891d197f0dc78cb4bb609533f328ca 284 Gene3D G3DSA:3.60.10.10 59 278 2.7E-8 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VV93_RS11380 6a891d197f0dc78cb4bb609533f328ca 284 SUPERFAMILY SSF56219 60 279 1.83E-24 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VV93_RS11380 6a891d197f0dc78cb4bb609533f328ca 284 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 279 59.757 T 23-04-2016 IPR022958 Uncharacterised protein family UPF0294 VV93_RS11380 6a891d197f0dc78cb4bb609533f328ca 284 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 67 271 7.3E-8 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VV93_RS05615 07393946ea740aab1ac9191d7e8669ff 286 SUPERFAMILY SSF81324 22 235 5.07E-53 T 23-04-2016 VV93_RS05615 07393946ea740aab1ac9191d7e8669ff 286 PANTHER PTHR11537:SF137 1 275 4.7E-102 T 23-04-2016 VV93_RS05615 07393946ea740aab1ac9191d7e8669ff 286 PRINTS PR00169 Potassium channel signature 149 172 1.3E-36 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VV93_RS05615 07393946ea740aab1ac9191d7e8669ff 286 PRINTS PR00169 Potassium channel signature 58 81 1.3E-36 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VV93_RS05615 07393946ea740aab1ac9191d7e8669ff 286 PRINTS PR00169 Potassium channel signature 84 104 1.3E-36 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VV93_RS05615 07393946ea740aab1ac9191d7e8669ff 286 PRINTS PR00169 Potassium channel signature 178 200 1.3E-36 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VV93_RS05615 07393946ea740aab1ac9191d7e8669ff 286 PRINTS PR00169 Potassium channel signature 16 44 1.3E-36 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VV93_RS05615 07393946ea740aab1ac9191d7e8669ff 286 PRINTS PR00169 Potassium channel signature 207 233 1.3E-36 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VV93_RS05615 07393946ea740aab1ac9191d7e8669ff 286 PRINTS PR00169 Potassium channel signature 120 146 1.3E-36 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VV93_RS05615 07393946ea740aab1ac9191d7e8669ff 286 Gene3D G3DSA:1.10.287.70 24 233 6.3E-54 T 23-04-2016 VV93_RS05615 07393946ea740aab1ac9191d7e8669ff 286 Pfam PF00520 Ion transport protein 24 235 9.5E-31 T 23-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VV93_RS05615 07393946ea740aab1ac9191d7e8669ff 286 PANTHER PTHR11537 1 275 4.7E-102 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VV93_RS00255 527202f1fcd16c67a0e03d5a5ecba7e5 314 SUPERFAMILY SSF110997 72 144 1.7E-7 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 VV93_RS00255 527202f1fcd16c67a0e03d5a5ecba7e5 314 Pfam PF05036 Sporulation related domain 74 143 1.9E-9 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 VV93_RS09285 5ae6cac8633ae4b9fa86dc9113a154b7 403 Gene3D G3DSA:1.10.3210.10 158 306 4.5E-17 T 23-04-2016 IPR006674 HD domain VV93_RS09285 5ae6cac8633ae4b9fa86dc9113a154b7 403 SUPERFAMILY SSF109604 156 327 1.52E-31 T 23-04-2016 VV93_RS09285 5ae6cac8633ae4b9fa86dc9113a154b7 403 Pfam PF01966 HD domain 166 287 1.2E-14 T 23-04-2016 IPR006674 HD domain VV93_RS09285 5ae6cac8633ae4b9fa86dc9113a154b7 403 SMART SM00471 161 297 1.2E-8 T 23-04-2016 IPR003607 HD/PDEase domain VV93_RS09285 5ae6cac8633ae4b9fa86dc9113a154b7 403 Pfam PF11871 Domain of unknown function (DUF3391) 9 133 1.7E-20 T 23-04-2016 IPR021812 Protein of unknown function DUF3391 VV93_RS15155 15e862f07d67a6a27aca6c235ac97935 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS15155 15e862f07d67a6a27aca6c235ac97935 613 SUPERFAMILY SSF52016 421 608 1.33E-61 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VV93_RS15155 15e862f07d67a6a27aca6c235ac97935 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS15155 15e862f07d67a6a27aca6c235ac97935 613 SUPERFAMILY SSF143975 3 420 7.45E-136 T 23-04-2016 VV93_RS15155 15e862f07d67a6a27aca6c235ac97935 613 PANTHER PTHR21000 1 371 0.0 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS15155 15e862f07d67a6a27aca6c235ac97935 613 PANTHER PTHR21000 406 613 0.0 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS15155 15e862f07d67a6a27aca6c235ac97935 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.166 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS15155 15e862f07d67a6a27aca6c235ac97935 613 PANTHER PTHR21000:SF11 1 371 0.0 T 23-04-2016 VV93_RS15155 15e862f07d67a6a27aca6c235ac97935 613 PANTHER PTHR21000:SF11 406 613 0.0 T 23-04-2016 VV93_RS15155 15e862f07d67a6a27aca6c235ac97935 613 Pfam PF00920 Dehydratase family 34 604 1.1E-218 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS15155 15e862f07d67a6a27aca6c235ac97935 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 1.8E-266 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VV93_RS06320 7adf7d449ec81673bac5e532d9795474 733 Gene3D G3DSA:3.40.50.300 414 415 1.5E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06320 7adf7d449ec81673bac5e532d9795474 733 Gene3D G3DSA:3.40.50.300 483 591 1.5E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06320 7adf7d449ec81673bac5e532d9795474 733 Gene3D G3DSA:3.40.50.300 4 196 1.5E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06320 7adf7d449ec81673bac5e532d9795474 733 SUPERFAMILY SSF52540 5 191 3.29E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06320 7adf7d449ec81673bac5e532d9795474 733 SUPERFAMILY SSF52540 414 583 3.29E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS06320 7adf7d449ec81673bac5e532d9795474 733 Pfam PF13166 AAA domain 17 718 3.4E-116 T 23-04-2016 IPR026866 P-loop containing protein CR006/PrrC VV93_RS07245 6112ab0c0771d07185da0ccb144a88a9 235 PANTHER PTHR23344 3 235 2.2E-70 T 23-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 VV93_RS07245 6112ab0c0771d07185da0ccb144a88a9 235 SUPERFAMILY SSF51695 3 234 2.51E-64 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 VV93_RS07245 6112ab0c0771d07185da0ccb144a88a9 235 Gene3D G3DSA:3.20.20.190 3 234 2.3E-64 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 VV93_RS07245 6112ab0c0771d07185da0ccb144a88a9 235 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 232 6.4E-36 T 23-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VV93_RS07245 6112ab0c0771d07185da0ccb144a88a9 235 PANTHER PTHR23344:SF20 3 235 2.2E-70 T 23-04-2016 VV93_RS13745 39625f3b01631820ecd3aecac65ccc29 403 Pfam PF01103 Surface antigen 106 376 1.6E-10 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 VV93_RS06720 9b255113df2e80d1f2e4fc175f4ac5fd 475 PANTHER PTHR11616 9 446 1.8E-148 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS06720 9b255113df2e80d1f2e4fc175f4ac5fd 475 Pfam PF00209 Sodium:neurotransmitter symporter family 149 447 3.7E-32 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS06720 9b255113df2e80d1f2e4fc175f4ac5fd 475 Pfam PF00209 Sodium:neurotransmitter symporter family 9 119 1.7E-21 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS06720 9b255113df2e80d1f2e4fc175f4ac5fd 475 PANTHER PTHR11616:SF167 9 446 1.8E-148 T 23-04-2016 VV93_RS06720 9b255113df2e80d1f2e4fc175f4ac5fd 475 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 33 47 - T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS06720 9b255113df2e80d1f2e4fc175f4ac5fd 475 SUPERFAMILY SSF161070 9 457 3.27E-129 T 23-04-2016 VV93_RS06720 9b255113df2e80d1f2e4fc175f4ac5fd 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 17 38 3.8E-12 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS06720 9b255113df2e80d1f2e4fc175f4ac5fd 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 334 3.8E-12 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS06720 9b255113df2e80d1f2e4fc175f4ac5fd 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 90 116 3.8E-12 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS06720 9b255113df2e80d1f2e4fc175f4ac5fd 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 46 65 3.8E-12 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV93_RS08535 e4163abc25b13c36d26c896b91f17cf7 81 Pfam PF07362 Post-segregation antitoxin CcdA 11 81 3.5E-28 T 23-04-2016 IPR009956 Post-segregation antitoxin CcdA VV93_RS13285 e56b3224a06432487ab8a80fb10bd3a1 199 Pfam PF13505 Outer membrane protein beta-barrel domain 29 199 2.1E-15 T 23-04-2016 IPR027385 Outer membrane protein beta-barrel VV93_RS13285 e56b3224a06432487ab8a80fb10bd3a1 199 SUPERFAMILY SSF56925 33 199 6.28E-12 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VV93_RS13285 e56b3224a06432487ab8a80fb10bd3a1 199 Gene3D G3DSA:2.40.160.20 29 199 1.5E-12 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VV93_RS11630 d229d5d565b7955a5cf41e480b17f761 210 PIRSF PIRSF006102 3 210 3.3E-73 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VV93_RS11630 d229d5d565b7955a5cf41e480b17f761 210 PANTHER PTHR30586:SF1 2 210 1.8E-144 T 23-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VV93_RS11630 d229d5d565b7955a5cf41e480b17f761 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.946 T 23-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VV93_RS11630 d229d5d565b7955a5cf41e480b17f761 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 1.6E-62 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VV93_RS11630 d229d5d565b7955a5cf41e480b17f761 210 PANTHER PTHR30586 2 210 1.8E-144 T 23-04-2016 VV93_RS11630 d229d5d565b7955a5cf41e480b17f761 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 4.0E-110 T 23-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VV93_RS13325 bb01868a701748ab3086619c775d85cd 143 PANTHER PTHR38978 1 143 2.3E-44 T 23-04-2016 VV93_RS13325 bb01868a701748ab3086619c775d85cd 143 Pfam PF10980 Protein of unknown function (DUF2787) 18 141 3.6E-39 T 23-04-2016 IPR021248 Protein of unknown function DUF2787 VV93_RS13325 bb01868a701748ab3086619c775d85cd 143 PANTHER PTHR38978:SF2 1 143 2.3E-44 T 23-04-2016 VV93_RS12905 7b02b2d0a770b0b8fd0cfce2f73e27f8 170 Pfam PF04073 Aminoacyl-tRNA editing domain 29 145 8.0E-26 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VV93_RS12905 7b02b2d0a770b0b8fd0cfce2f73e27f8 170 Gene3D G3DSA:3.90.960.10 7 158 1.2E-36 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VV93_RS12905 7b02b2d0a770b0b8fd0cfce2f73e27f8 170 PANTHER PTHR30411 8 168 4.0E-22 T 23-04-2016 VV93_RS12905 7b02b2d0a770b0b8fd0cfce2f73e27f8 170 SUPERFAMILY SSF55826 6 157 7.33E-38 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VV93_RS05125 7cd44f4468fd3d2186e85e010a85b6c4 123 Gene3D G3DSA:3.10.129.10 15 111 4.2E-14 T 23-04-2016 IPR029069 HotDog domain VV93_RS05125 7cd44f4468fd3d2186e85e010a85b6c4 123 PIRSF PIRSF030962 1 123 2.9E-64 T 23-04-2016 IPR016962 Dehydrase, ECs4332, predicted VV93_RS05125 7cd44f4468fd3d2186e85e010a85b6c4 123 SUPERFAMILY SSF54637 15 110 6.3E-16 T 23-04-2016 IPR029069 HotDog domain VV93_RS04955 d1ea496c88574fc95edcad6bdfbc603f 76 Pfam PF09012 FeoC like transcriptional regulator 2 54 2.7E-13 T 23-04-2016 IPR015102 Transcriptional regulator HTH-type, FeoC VV93_RS04955 d1ea496c88574fc95edcad6bdfbc603f 76 Gene3D G3DSA:1.10.10.10 5 50 2.5E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS04955 d1ea496c88574fc95edcad6bdfbc603f 76 SUPERFAMILY SSF46785 1 58 1.91E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS07725 f2d69bc0477678035a27d1f1a847b837 350 PIRSF PIRSF001361 2 350 1.2E-155 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VV93_RS07725 f2d69bc0477678035a27d1f1a847b837 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 5.3E-160 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VV93_RS07725 f2d69bc0477678035a27d1f1a847b837 350 PANTHER PTHR21225:SF6 1 350 1.0E-260 T 23-04-2016 VV93_RS07725 f2d69bc0477678035a27d1f1a847b837 350 Gene3D G3DSA:3.20.20.70 11 350 3.3E-147 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS07725 f2d69bc0477678035a27d1f1a847b837 350 PANTHER PTHR21225 1 350 1.0E-260 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VV93_RS07725 f2d69bc0477678035a27d1f1a847b837 350 Pfam PF00793 DAHP synthetase I family 42 338 6.5E-100 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VV93_RS07725 f2d69bc0477678035a27d1f1a847b837 350 SUPERFAMILY SSF51569 8 347 1.17E-129 T 23-04-2016 VV93_RS04275 994ad6f2bfcd9f524ba7f9dd97ddd165 176 Pfam PF04390 Lipopolysaccharide-assembly 13 159 2.6E-21 T 23-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VV93_RS04275 994ad6f2bfcd9f524ba7f9dd97ddd165 176 Gene3D G3DSA:3.30.160.150 22 169 2.7E-56 T 23-04-2016 VV93_RS04275 994ad6f2bfcd9f524ba7f9dd97ddd165 176 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 8 164 24.519 T 23-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VV93_RS04275 994ad6f2bfcd9f524ba7f9dd97ddd165 176 PANTHER PTHR38098:SF1 1 170 2.0E-49 T 23-04-2016 VV93_RS04275 994ad6f2bfcd9f524ba7f9dd97ddd165 176 PANTHER PTHR38098 1 170 2.0E-49 T 23-04-2016 VV93_RS05005 743de7f01ce1fdbb46c41ceb9635c81f 284 PANTHER PTHR10992:SF699 28 283 3.5E-34 T 23-04-2016 VV93_RS05005 743de7f01ce1fdbb46c41ceb9635c81f 284 Gene3D G3DSA:3.40.50.1820 10 281 8.0E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS05005 743de7f01ce1fdbb46c41ceb9635c81f 284 Pfam PF00561 alpha/beta hydrolase fold 27 141 6.0E-18 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VV93_RS05005 743de7f01ce1fdbb46c41ceb9635c81f 284 SUPERFAMILY SSF53474 10 282 3.32E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS05005 743de7f01ce1fdbb46c41ceb9635c81f 284 PANTHER PTHR10992 28 283 3.5E-34 T 23-04-2016 VV93_RS14210 f0f4661fee8256388bbf2cd58172022a 86 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.6E-30 T 23-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VV93_RS14210 f0f4661fee8256388bbf2cd58172022a 86 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 23-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VV93_RS14210 f0f4661fee8256388bbf2cd58172022a 86 PANTHER PTHR34772:SF1 1 86 8.5E-42 T 23-04-2016 VV93_RS14210 f0f4661fee8256388bbf2cd58172022a 86 SUPERFAMILY SSF50182 7 69 1.16E-24 T 23-04-2016 IPR010920 LSM domain VV93_RS14210 f0f4661fee8256388bbf2cd58172022a 86 Gene3D G3DSA:2.30.30.100 1 74 2.8E-38 T 23-04-2016 VV93_RS14210 f0f4661fee8256388bbf2cd58172022a 86 PANTHER PTHR34772 1 86 8.5E-42 T 23-04-2016 VV93_RS05290 fbb5636e9317c5da1a6a9a4cf7f02c65 202 Pfam PF03942 DTW domain 3 188 1.2E-50 T 23-04-2016 IPR005636 DTW VV93_RS05290 fbb5636e9317c5da1a6a9a4cf7f02c65 202 PANTHER PTHR21392 1 192 7.4E-51 T 23-04-2016 VV93_RS05290 fbb5636e9317c5da1a6a9a4cf7f02c65 202 SMART SM01144 1 193 5.1E-68 T 23-04-2016 IPR005636 DTW VV93_RS04925 42f83ed3ce427a4788cf04e6c74ba35a 261 SUPERFAMILY SSF81345 2 256 2.62E-39 T 23-04-2016 IPR029022 ABC transporter, BtuC-like VV93_RS04925 42f83ed3ce427a4788cf04e6c74ba35a 261 PANTHER PTHR30477:SF0 3 256 2.6E-83 T 23-04-2016 VV93_RS04925 42f83ed3ce427a4788cf04e6c74ba35a 261 Pfam PF00950 ABC 3 transport family 1 255 2.5E-75 T 23-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 VV93_RS04925 42f83ed3ce427a4788cf04e6c74ba35a 261 Gene3D G3DSA:1.10.3470.10 54 240 3.5E-8 T 23-04-2016 IPR029022 ABC transporter, BtuC-like VV93_RS04925 42f83ed3ce427a4788cf04e6c74ba35a 261 PANTHER PTHR30477 3 256 2.6E-83 T 23-04-2016 VV93_RS08610 fc7507803e3bc72a5b630b9981e983e0 168 SUPERFAMILY SSF52540 2 165 5.25E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08610 fc7507803e3bc72a5b630b9981e983e0 168 Gene3D G3DSA:3.40.50.300 3 166 1.7E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS08610 fc7507803e3bc72a5b630b9981e983e0 168 Pfam PF13671 AAA domain 6 138 3.4E-10 T 23-04-2016 VV93_RS03120 79e4114eb2485ab03389755fb2f461e7 271 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 263 2.4E-92 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VV93_RS03120 79e4114eb2485ab03389755fb2f461e7 271 PANTHER PTHR30589 2 261 4.2E-124 T 23-04-2016 VV93_RS03120 79e4114eb2485ab03389755fb2f461e7 271 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.225 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VV93_RS03120 79e4114eb2485ab03389755fb2f461e7 271 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 1.9E-83 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VV93_RS03120 79e4114eb2485ab03389755fb2f461e7 271 PANTHER PTHR30589:SF0 2 261 4.2E-124 T 23-04-2016 VV93_RS03120 79e4114eb2485ab03389755fb2f461e7 271 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VV93_RS08210 e06ea6d1435c75787bb99e45998702cf 251 PANTHER PTHR21392 1 241 1.3E-94 T 23-04-2016 VV93_RS08210 e06ea6d1435c75787bb99e45998702cf 251 PANTHER PTHR21392:SF1 1 241 1.3E-94 T 23-04-2016 VV93_RS08210 e06ea6d1435c75787bb99e45998702cf 251 Pfam PF03942 DTW domain 30 221 9.0E-40 T 23-04-2016 IPR005636 DTW VV93_RS08210 e06ea6d1435c75787bb99e45998702cf 251 SMART SM01144 27 227 7.7E-63 T 23-04-2016 IPR005636 DTW VV93_RS12960 8ada67eedbad970ae99aad4992048810 206 Pfam PF01810 LysE type translocator 15 200 7.0E-42 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VV93_RS12960 8ada67eedbad970ae99aad4992048810 206 PANTHER PTHR30086 1 206 1.1E-87 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VV93_RS12960 8ada67eedbad970ae99aad4992048810 206 PANTHER PTHR30086:SF0 1 206 1.1E-87 T 23-04-2016 VV93_RS07640 404e8352bc35e40818ab7fd2f748d2e3 392 SUPERFAMILY SSF53756 91 391 1.07E-17 T 23-04-2016 VV93_RS07640 404e8352bc35e40818ab7fd2f748d2e3 392 SUPERFAMILY SSF53756 11 44 1.07E-17 T 23-04-2016 VV93_RS05755 33df0e61be32082ce7a0b015f5413b1d 81 PANTHER PTHR33359:SF1 1 81 3.5E-27 T 23-04-2016 VV93_RS05755 33df0e61be32082ce7a0b015f5413b1d 81 Gene3D G3DSA:3.10.20.30 1 81 5.3E-27 T 23-04-2016 IPR012675 Beta-grasp domain VV93_RS05755 33df0e61be32082ce7a0b015f5413b1d 81 Pfam PF02597 ThiS family 4 81 9.1E-24 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 VV93_RS05755 33df0e61be32082ce7a0b015f5413b1d 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 3.1E-23 T 23-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 VV93_RS05755 33df0e61be32082ce7a0b015f5413b1d 81 SUPERFAMILY SSF54285 1 81 2.06E-23 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VV93_RS05755 33df0e61be32082ce7a0b015f5413b1d 81 PANTHER PTHR33359 1 81 3.5E-27 T 23-04-2016 VV93_RS03190 7cfd4c739ed003c62f286c9a5a9cdba8 560 PANTHER PTHR34220:SF3 1 560 1.0E-274 T 23-04-2016 VV93_RS03190 7cfd4c739ed003c62f286c9a5a9cdba8 560 SUPERFAMILY SSF55781 228 351 3.08E-7 T 23-04-2016 IPR029016 GAF domain-like VV93_RS03190 7cfd4c739ed003c62f286c9a5a9cdba8 560 Pfam PF13492 GAF domain 242 351 4.9E-7 T 23-04-2016 IPR003018 GAF domain GO:0005515 VV93_RS03190 7cfd4c739ed003c62f286c9a5a9cdba8 560 Gene3D G3DSA:3.30.565.10 414 556 1.1E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS03190 7cfd4c739ed003c62f286c9a5a9cdba8 560 Pfam PF06580 Histidine kinase 367 444 1.2E-26 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VV93_RS03190 7cfd4c739ed003c62f286c9a5a9cdba8 560 Pfam PF07694 5TMR of 5TMR-LYT 26 194 9.1E-61 T 23-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 VV93_RS03190 7cfd4c739ed003c62f286c9a5a9cdba8 560 PANTHER PTHR34220 1 560 1.0E-274 T 23-04-2016 VV93_RS03190 7cfd4c739ed003c62f286c9a5a9cdba8 560 SUPERFAMILY SSF55874 420 553 4.16E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VV93_RS03190 7cfd4c739ed003c62f286c9a5a9cdba8 560 Gene3D G3DSA:3.30.450.40 299 359 2.1E-4 T 23-04-2016 IPR029016 GAF domain-like VV93_RS02775 a458723b454608482b2c8e69891c25ce 603 Gene3D G3DSA:3.40.50.2300 369 532 4.6E-49 T 23-04-2016 VV93_RS02775 a458723b454608482b2c8e69891c25ce 603 Gene3D G3DSA:3.40.50.2300 533 596 1.1E-50 T 23-04-2016 VV93_RS02775 a458723b454608482b2c8e69891c25ce 603 Gene3D G3DSA:3.40.50.2300 256 368 1.1E-50 T 23-04-2016 VV93_RS02775 a458723b454608482b2c8e69891c25ce 603 Pfam PF04348 LppC putative lipoprotein 40 601 1.4E-155 T 23-04-2016 IPR007443 Penicillin-binding protein activator LpoA VV93_RS02775 a458723b454608482b2c8e69891c25ce 603 PANTHER PTHR38038 1 600 2.7E-155 T 23-04-2016 VV93_RS02775 a458723b454608482b2c8e69891c25ce 603 PANTHER PTHR38038:SF1 1 600 2.7E-155 T 23-04-2016 VV93_RS02775 a458723b454608482b2c8e69891c25ce 603 SUPERFAMILY SSF53822 456 600 9.89E-67 T 23-04-2016 IPR028082 Periplasmic binding protein-like I VV93_RS02775 a458723b454608482b2c8e69891c25ce 603 SUPERFAMILY SSF53822 258 428 9.89E-67 T 23-04-2016 IPR028082 Periplasmic binding protein-like I VV93_RS01250 10d280fc358430b4e5c4812f606b1bb0 632 Gene3D G3DSA:3.40.720.10 260 541 6.6E-27 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VV93_RS01250 10d280fc358430b4e5c4812f606b1bb0 632 PANTHER PTHR10342 260 542 1.8E-27 T 23-04-2016 VV93_RS01250 10d280fc358430b4e5c4812f606b1bb0 632 SUPERFAMILY SSF53649 258 601 1.74E-40 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VV93_RS01250 10d280fc358430b4e5c4812f606b1bb0 632 Pfam PF00884 Sulfatase 260 529 1.5E-26 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VV93_RS01250 10d280fc358430b4e5c4812f606b1bb0 632 PANTHER PTHR10342:SF236 260 542 1.8E-27 T 23-04-2016 VV93_RS00965 bf32e362077307c744dd090a6c94d525 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 146 7.5E-45 T 23-04-2016 IPR019617 Domain of unknown function DUF2489 VV93_RS17815 eeb35198208d81192ef75d535127ef69 168 SUPERFAMILY SSF81799 97 161 2.35E-20 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS17815 eeb35198208d81192ef75d535127ef69 168 Gene3D G3DSA:3.40.50.150 2 95 1.9E-21 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS17815 eeb35198208d81192ef75d535127ef69 168 PANTHER PTHR11265 1 168 2.0E-72 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS17815 eeb35198208d81192ef75d535127ef69 168 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 1 166 1.3E-59 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS17815 eeb35198208d81192ef75d535127ef69 168 Pfam PF01795 MraW methylase family 2 159 1.2E-53 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS17815 eeb35198208d81192ef75d535127ef69 168 Gene3D G3DSA:1.10.150.170 96 164 7.2E-21 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS17815 eeb35198208d81192ef75d535127ef69 168 PANTHER PTHR11265:SF0 1 168 2.0E-72 T 23-04-2016 VV93_RS17815 eeb35198208d81192ef75d535127ef69 168 SUPERFAMILY SSF53335 2 97 8.0E-19 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS11645 79b1f22cf054ed2d04f4983851d10e6f 446 PANTHER PTHR37839 1 446 2.4E-221 T 23-04-2016 VV93_RS11645 79b1f22cf054ed2d04f4983851d10e6f 446 Pfam PF11973 NQRA C-terminal domain 261 310 5.1E-21 T 23-04-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 VV93_RS11645 79b1f22cf054ed2d04f4983851d10e6f 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 8.4E-115 T 23-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VV93_RS11645 79b1f22cf054ed2d04f4983851d10e6f 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 46.226 T 23-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VV93_RS11645 79b1f22cf054ed2d04f4983851d10e6f 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 4.9E-205 T 23-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VV93_RS11645 79b1f22cf054ed2d04f4983851d10e6f 446 PANTHER PTHR37839:SF1 1 446 2.4E-221 T 23-04-2016 VV93_RS05585 ac580598a64dd6c720854cbbb35681cf 333 PANTHER PTHR38772 2 333 9.6E-166 T 23-04-2016 VV93_RS05585 ac580598a64dd6c720854cbbb35681cf 333 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 47.895 T 23-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VV93_RS05585 ac580598a64dd6c720854cbbb35681cf 333 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 1.2E-98 T 23-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VV93_RS10655 87af584844fbfada2b104c242f9f2a14 82 Pfam PF03692 Putative zinc- or iron-chelating domain 3 59 9.3E-6 T 23-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein VV93_RS10655 87af584844fbfada2b104c242f9f2a14 82 PANTHER PTHR36931 1 82 2.2E-38 T 23-04-2016 VV93_RS08715 5480ce2e2867399f29063837ce9e00e8 565 Hamap MF_00577 Urocanate hydratase [hutU]. 2 558 49.321 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VV93_RS08715 5480ce2e2867399f29063837ce9e00e8 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 2.0E-291 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VV93_RS08715 5480ce2e2867399f29063837ce9e00e8 565 SUPERFAMILY SSF111326 11 557 1.57E-258 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VV93_RS08715 5480ce2e2867399f29063837ce9e00e8 565 Gene3D G3DSA:3.40.50.10730 147 351 2.6E-90 T 23-04-2016 VV93_RS08715 5480ce2e2867399f29063837ce9e00e8 565 Gene3D G3DSA:3.40.1770.10 362 557 8.2E-163 T 23-04-2016 VV93_RS08715 5480ce2e2867399f29063837ce9e00e8 565 Gene3D G3DSA:3.40.1770.10 14 146 8.2E-163 T 23-04-2016 VV93_RS08715 5480ce2e2867399f29063837ce9e00e8 565 PANTHER PTHR12216 10 557 0.0 T 23-04-2016 VV93_RS08715 5480ce2e2867399f29063837ce9e00e8 565 Pfam PF01175 Urocanase 17 549 1.8E-259 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VV93_RS08715 5480ce2e2867399f29063837ce9e00e8 565 PANTHER PTHR12216:SF3 10 557 0.0 T 23-04-2016 VV93_RS08715 5480ce2e2867399f29063837ce9e00e8 565 PIRSF PIRSF001423 1 563 8.2E-295 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VV93_RS08715 5480ce2e2867399f29063837ce9e00e8 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 23-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VV93_RS00890 337230612c12a30e6a3a69906e22ce7f 302 SUPERFAMILY SSF103481 189 291 1.96E-10 T 23-04-2016 VV93_RS00890 337230612c12a30e6a3a69906e22ce7f 302 SUPERFAMILY SSF103481 45 144 1.18E-12 T 23-04-2016 VV93_RS00890 337230612c12a30e6a3a69906e22ce7f 302 PANTHER PTHR22911:SF58 1 289 2.5E-160 T 23-04-2016 VV93_RS00890 337230612c12a30e6a3a69906e22ce7f 302 PANTHER PTHR22911 1 289 2.5E-160 T 23-04-2016 VV93_RS00890 337230612c12a30e6a3a69906e22ce7f 302 Pfam PF00892 EamA-like transporter family 156 286 1.2E-16 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VV93_RS00890 337230612c12a30e6a3a69906e22ce7f 302 Pfam PF00892 EamA-like transporter family 9 141 7.0E-18 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VV93_RS19970 6804f20b744052d1186e6400849e2e69 231 Pfam PF00221 Aromatic amino acid lyase 3 230 4.3E-84 T 23-04-2016 IPR001106 Aromatic amino acid lyase VV93_RS19970 6804f20b744052d1186e6400849e2e69 231 SUPERFAMILY SSF48557 3 230 5.34E-86 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 VV93_RS19970 6804f20b744052d1186e6400849e2e69 231 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 68 84 - T 23-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 VV93_RS19970 6804f20b744052d1186e6400849e2e69 231 Gene3D G3DSA:1.10.275.10 2 126 3.7E-44 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal VV93_RS19970 6804f20b744052d1186e6400849e2e69 231 PANTHER PTHR10362:SF7 1 230 3.4E-91 T 23-04-2016 VV93_RS19970 6804f20b744052d1186e6400849e2e69 231 Gene3D G3DSA:1.20.200.10 127 230 1.4E-32 T 23-04-2016 VV93_RS19970 6804f20b744052d1186e6400849e2e69 231 PANTHER PTHR10362 1 230 3.4E-91 T 23-04-2016 VV93_RS01585 43e29aca296276e6977a7a8be203298c 212 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 170 198 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VV93_RS01585 43e29aca296276e6977a7a8be203298c 212 Gene3D G3DSA:3.40.50.20 7 93 1.0E-5 T 23-04-2016 IPR016185 Pre-ATP-grasp domain VV93_RS01585 43e29aca296276e6977a7a8be203298c 212 Gene3D G3DSA:2.160.10.10 95 209 5.1E-25 T 23-04-2016 VV93_RS01585 43e29aca296276e6977a7a8be203298c 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 159 1.8E-5 T 23-04-2016 IPR001451 Hexapeptide repeat VV93_RS01585 43e29aca296276e6977a7a8be203298c 212 SUPERFAMILY SSF51161 3 205 5.82E-36 T 23-04-2016 IPR011004 Trimeric LpxA-like VV93_RS01585 43e29aca296276e6977a7a8be203298c 212 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 7 207 1.7E-55 T 23-04-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like VV93_RS09345 4c54c46c2747f2f57179ba1225670828 341 PANTHER PTHR39342:SF1 1 337 1.0E-83 T 23-04-2016 VV93_RS09345 4c54c46c2747f2f57179ba1225670828 341 PANTHER PTHR39342 1 337 1.0E-83 T 23-04-2016 VV93_RS09345 4c54c46c2747f2f57179ba1225670828 341 Pfam PF05128 Domain of unknown function (DUF697) 176 334 3.1E-52 T 23-04-2016 IPR021147 Protein of unknown function DUF697 VV93_RS09345 4c54c46c2747f2f57179ba1225670828 341 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 3 341 36.507 T 23-04-2016 IPR006507 Uncharacterised protein family UPF0283 VV93_RS09345 4c54c46c2747f2f57179ba1225670828 341 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 61 334 1.2E-80 T 23-04-2016 IPR006507 Uncharacterised protein family UPF0283 VV93_RS01595 eda70a310348d8d43394624cc53a2c97 332 Gene3D G3DSA:3.30.360.10 131 318 3.4E-24 T 23-04-2016 VV93_RS01595 eda70a310348d8d43394624cc53a2c97 332 Gene3D G3DSA:3.40.50.720 3 130 6.6E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01595 eda70a310348d8d43394624cc53a2c97 332 SUPERFAMILY SSF55347 127 296 7.19E-24 T 23-04-2016 VV93_RS01595 eda70a310348d8d43394624cc53a2c97 332 SUPERFAMILY SSF51735 3 153 8.15E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01595 eda70a310348d8d43394624cc53a2c97 332 PANTHER PTHR22604 3 318 4.0E-42 T 23-04-2016 VV93_RS01595 eda70a310348d8d43394624cc53a2c97 332 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 118 5.2E-17 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 VV93_RS09505 0cc0bb2e660c651c7aabce81aa7e0646 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 2.0E-100 T 23-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VV93_RS09505 0cc0bb2e660c651c7aabce81aa7e0646 428 PANTHER PTHR33362:SF7 1 424 7.1E-242 T 23-04-2016 VV93_RS09505 0cc0bb2e660c651c7aabce81aa7e0646 428 PANTHER PTHR33362 1 424 7.1E-242 T 23-04-2016 VV93_RS09505 0cc0bb2e660c651c7aabce81aa7e0646 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 424 1.2E-107 T 23-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VV93_RS09505 0cc0bb2e660c651c7aabce81aa7e0646 428 PIRSF PIRSF006066 1 427 4.6E-75 T 23-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VV93_RS08360 86324bccdd25be72c8a80346a4965f69 135 Gene3D G3DSA:3.90.1590.10 2 133 1.8E-28 T 23-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 VV93_RS08360 86324bccdd25be72c8a80346a4965f69 135 SUPERFAMILY SSF51316 2 134 1.26E-32 T 23-04-2016 IPR011057 Mss4-like VV93_RS08360 86324bccdd25be72c8a80346a4965f69 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 115 3.9E-19 T 23-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 VV93_RS08360 86324bccdd25be72c8a80346a4965f69 135 PANTHER PTHR33337:SF11 4 134 3.4E-20 T 23-04-2016 VV93_RS08360 86324bccdd25be72c8a80346a4965f69 135 PANTHER PTHR33337 4 134 3.4E-20 T 23-04-2016 VV93_RS09765 4d0b9d06b267c832ca3a37b3b401811e 156 Gene3D G3DSA:3.30.460.10 5 155 9.3E-29 T 23-04-2016 VV93_RS09765 4d0b9d06b267c832ca3a37b3b401811e 156 PANTHER PTHR34822 1 156 4.8E-38 T 23-04-2016 VV93_RS09765 4d0b9d06b267c832ca3a37b3b401811e 156 SUPERFAMILY SSF81301 7 155 1.57E-32 T 23-04-2016 VV93_RS09765 4d0b9d06b267c832ca3a37b3b401811e 156 Pfam PF04229 GrpB protein 7 155 2.1E-24 T 23-04-2016 IPR007344 GrpB/Dephospho-CoA kinase VV93_RS02025 3d4e7ac9ac8f80f3d24feb517ff45b45 183 Gene3D G3DSA:3.40.30.10 22 177 3.1E-5 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS02025 3d4e7ac9ac8f80f3d24feb517ff45b45 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 181 1.4E-76 T 23-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VV93_RS02025 3d4e7ac9ac8f80f3d24feb517ff45b45 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 7.7E-86 T 23-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VV93_RS11290 7b8b28aace0ed2ee5becbe4696c33a70 417 PANTHER PTHR11119 1 417 6.9E-174 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VV93_RS11290 7b8b28aace0ed2ee5becbe4696c33a70 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VV93_RS11290 7b8b28aace0ed2ee5becbe4696c33a70 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 4 395 3.0E-111 T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VV93_RS11290 7b8b28aace0ed2ee5becbe4696c33a70 417 Pfam PF00860 Permease family 3 371 2.9E-91 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VV93_RS11290 7b8b28aace0ed2ee5becbe4696c33a70 417 PANTHER PTHR11119:SF49 1 417 6.9E-174 T 23-04-2016 VV93_RS00410 21f6a5da858f80832bbb9f2d840f016e 243 PANTHER PTHR38042 1 242 2.3E-69 T 23-04-2016 VV93_RS00410 21f6a5da858f80832bbb9f2d840f016e 243 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 227 6.9E-36 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00410 21f6a5da858f80832bbb9f2d840f016e 243 Gene3D G3DSA:3.40.50.10090 143 241 7.3E-5 T 23-04-2016 VV93_RS00410 21f6a5da858f80832bbb9f2d840f016e 243 SUPERFAMILY SSF69618 1 241 1.24E-55 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VV93_RS00410 21f6a5da858f80832bbb9f2d840f016e 243 Gene3D G3DSA:3.40.50.10090 28 142 6.5E-16 T 23-04-2016 VV93_RS00410 21f6a5da858f80832bbb9f2d840f016e 243 PANTHER PTHR38042:SF1 1 242 2.3E-69 T 23-04-2016 VV93_RS07855 7b5a41f7516701fb743e9757a40cf9e5 405 SUPERFAMILY SSF109604 132 278 2.86E-8 T 23-04-2016 VV93_RS07855 7b5a41f7516701fb743e9757a40cf9e5 405 Pfam PF08668 HDOD domain 137 280 1.3E-5 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD VV93_RS07855 7b5a41f7516701fb743e9757a40cf9e5 405 Gene3D G3DSA:1.10.3150.10 137 275 7.9E-7 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD VV93_RS00670 cd0a6757cd0d7e84819ed2e517bb061f 95 SUPERFAMILY SSF56349 23 93 2.0E-9 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS00670 cd0a6757cd0d7e84819ed2e517bb061f 95 Gene3D G3DSA:1.10.443.10 24 77 4.9E-5 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS01820 e42ef59624df434beee326673e58f593 92 PIRSF PIRSF002144 1 92 2.5E-31 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VV93_RS01820 e42ef59624df434beee326673e58f593 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 7.7E-25 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VV93_RS01820 e42ef59624df434beee326673e58f593 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 7.7E-25 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VV93_RS01820 e42ef59624df434beee326673e58f593 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 7.7E-25 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VV93_RS01820 e42ef59624df434beee326673e58f593 92 Pfam PF00203 Ribosomal protein S19 3 83 8.4E-37 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VV93_RS01820 e42ef59624df434beee326673e58f593 92 Gene3D G3DSA:3.30.860.10 1 91 3.9E-41 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 VV93_RS01820 e42ef59624df434beee326673e58f593 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.2E-46 T 23-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 VV93_RS01820 e42ef59624df434beee326673e58f593 92 PANTHER PTHR11880 1 91 2.4E-57 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VV93_RS01820 e42ef59624df434beee326673e58f593 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.647 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VV93_RS01820 e42ef59624df434beee326673e58f593 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 23-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 VV93_RS01820 e42ef59624df434beee326673e58f593 92 SUPERFAMILY SSF54570 3 84 2.62E-35 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 VV93_RS15235 31949c4cc981f4daafc08fa174f62b2c 293 SMART SM00470 40 130 1.1E-35 T 23-04-2016 IPR003115 ParB/Sulfiredoxin VV93_RS15235 31949c4cc981f4daafc08fa174f62b2c 293 Gene3D G3DSA:3.90.1530.10 35 136 2.5E-39 T 23-04-2016 VV93_RS15235 31949c4cc981f4daafc08fa174f62b2c 293 PANTHER PTHR33375 1 291 3.3E-88 T 23-04-2016 VV93_RS15235 31949c4cc981f4daafc08fa174f62b2c 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 38 214 2.2E-56 T 23-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VV93_RS15235 31949c4cc981f4daafc08fa174f62b2c 293 SUPERFAMILY SSF110849 43 174 1.36E-33 T 23-04-2016 IPR003115 ParB/Sulfiredoxin VV93_RS15235 31949c4cc981f4daafc08fa174f62b2c 293 Pfam PF02195 ParB-like nuclease domain 42 130 3.5E-29 T 23-04-2016 IPR003115 ParB/Sulfiredoxin VV93_RS12425 0d982e11784c1fefebbdabb9c405cef9 398 Pfam PF05651 Putative sugar diacid recognition 3 136 3.1E-53 T 23-04-2016 IPR008599 Putative sugar diacid recognition VV93_RS12425 0d982e11784c1fefebbdabb9c405cef9 398 PANTHER PTHR33744 1 389 2.8E-136 T 23-04-2016 VV93_RS12425 0d982e11784c1fefebbdabb9c405cef9 398 Pfam PF13556 PucR C-terminal helix-turn-helix domain 321 378 2.3E-20 T 23-04-2016 IPR025736 PucR C-terminal helix-turn-helix domain VV93_RS12425 0d982e11784c1fefebbdabb9c405cef9 398 PANTHER PTHR33744:SF1 1 389 2.8E-136 T 23-04-2016 VV93_RS09530 2ce2f6c4ccc726f3ba359cba6e898e4e 218 Pfam PF00753 Metallo-beta-lactamase superfamily 11 195 5.4E-28 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS09530 2ce2f6c4ccc726f3ba359cba6e898e4e 218 Gene3D G3DSA:3.60.15.10 3 213 1.7E-58 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS09530 2ce2f6c4ccc726f3ba359cba6e898e4e 218 SMART SM00849 14 195 1.3E-37 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS09530 2ce2f6c4ccc726f3ba359cba6e898e4e 218 PANTHER PTHR11935:SF115 1 215 2.0E-120 T 23-04-2016 VV93_RS09530 2ce2f6c4ccc726f3ba359cba6e898e4e 218 PANTHER PTHR11935 1 215 2.0E-120 T 23-04-2016 VV93_RS09530 2ce2f6c4ccc726f3ba359cba6e898e4e 218 SUPERFAMILY SSF56281 4 211 2.44E-55 T 23-04-2016 IPR001279 Metallo-beta-lactamase VV93_RS11590 968b3f4aff92c6276d5c9cc33b60713f 247 Pfam PF11101 Protein of unknown function (DUF2884) 21 245 3.1E-71 T 23-04-2016 IPR021307 Protein of unknown function DUF2884 VV93_RS02160 18544608a2a0f799f6d246984c6319b6 187 PIRSF PIRSF028513 2 185 1.4E-32 T 23-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VV93_RS02160 18544608a2a0f799f6d246984c6319b6 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 8 183 7.2E-49 T 23-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related VV93_RS02160 18544608a2a0f799f6d246984c6319b6 187 PANTHER PTHR37481:SF1 1 187 4.6E-49 T 23-04-2016 VV93_RS02160 18544608a2a0f799f6d246984c6319b6 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 2.3E-52 T 23-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VV93_RS02160 18544608a2a0f799f6d246984c6319b6 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 24.422 T 23-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VV93_RS02160 18544608a2a0f799f6d246984c6319b6 187 PANTHER PTHR37481 1 187 4.6E-49 T 23-04-2016 VV93_RS14665 84283dc51308e10e309e2ab27bb383f6 162 Pfam PF00466 Ribosomal protein L10 5 101 3.2E-26 T 23-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 VV93_RS14665 84283dc51308e10e309e2ab27bb383f6 162 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 23-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV93_RS14665 84283dc51308e10e309e2ab27bb383f6 162 SUPERFAMILY SSF160369 4 159 4.97E-45 T 23-04-2016 VV93_RS14665 84283dc51308e10e309e2ab27bb383f6 162 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.316 T 23-04-2016 IPR022973 Ribosomal protein L10 VV93_RS14665 84283dc51308e10e309e2ab27bb383f6 162 PANTHER PTHR11560 1 162 4.9E-56 T 23-04-2016 VV93_RS12305 c60e660b2b867f13c6c9ba45b220cb39 430 Gene3D G3DSA:2.70.70.10 251 392 9.2E-45 T 23-04-2016 VV93_RS12305 c60e660b2b867f13c6c9ba45b220cb39 430 SUPERFAMILY SSF51261 146 391 6.28E-70 T 23-04-2016 IPR011055 Duplicated hybrid motif VV93_RS12305 c60e660b2b867f13c6c9ba45b220cb39 430 Pfam PF01551 Peptidase family M23 296 390 8.7E-31 T 23-04-2016 IPR016047 Peptidase M23 VV93_RS12305 c60e660b2b867f13c6c9ba45b220cb39 430 Pfam PF04225 Opacity-associated protein A LysM-like domain 73 153 5.9E-5 T 23-04-2016 IPR007340 Opacity-associated protein A VV93_RS12305 c60e660b2b867f13c6c9ba45b220cb39 430 PANTHER PTHR21666:SF221 1 414 1.9E-139 T 23-04-2016 VV93_RS12305 c60e660b2b867f13c6c9ba45b220cb39 430 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 32 7.5E-6 T 23-04-2016 IPR013731 Opacity-associated protein A, N-terminal VV93_RS12305 c60e660b2b867f13c6c9ba45b220cb39 430 PANTHER PTHR21666 1 414 1.9E-139 T 23-04-2016 VV93_RS07970 ec70e6a62482c88fcc21847b9d06a67d 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 7 45 1.9E-11 T 23-04-2016 IPR008621 Cbb3-type cytochrome oxidase component VV93_RS08005 0b36a0fe56ccaa351a7d94627c31dd89 315 PANTHER PTHR31964 245 313 5.3E-66 T 23-04-2016 VV93_RS08005 0b36a0fe56ccaa351a7d94627c31dd89 315 PANTHER PTHR31964 1 90 5.3E-66 T 23-04-2016 VV93_RS08005 0b36a0fe56ccaa351a7d94627c31dd89 315 Pfam PF00582 Universal stress protein family 4 148 4.3E-15 T 23-04-2016 IPR006016 UspA GO:0006950 VV93_RS08005 0b36a0fe56ccaa351a7d94627c31dd89 315 Pfam PF00582 Universal stress protein family 178 301 1.5E-15 T 23-04-2016 IPR006016 UspA GO:0006950 VV93_RS08005 0b36a0fe56ccaa351a7d94627c31dd89 315 Gene3D G3DSA:3.40.50.620 142 300 4.1E-25 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS08005 0b36a0fe56ccaa351a7d94627c31dd89 315 Gene3D G3DSA:3.40.50.620 4 141 4.5E-21 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV93_RS08005 0b36a0fe56ccaa351a7d94627c31dd89 315 SUPERFAMILY SSF52402 158 309 2.26E-24 T 23-04-2016 VV93_RS08005 0b36a0fe56ccaa351a7d94627c31dd89 315 PANTHER PTHR31964:SF41 245 313 5.3E-66 T 23-04-2016 VV93_RS08005 0b36a0fe56ccaa351a7d94627c31dd89 315 PANTHER PTHR31964:SF41 1 90 5.3E-66 T 23-04-2016 VV93_RS08005 0b36a0fe56ccaa351a7d94627c31dd89 315 SUPERFAMILY SSF52402 4 158 4.19E-26 T 23-04-2016 VV93_RS01725 6ea0131b0cf349f73a6d092a49a1a416 290 PANTHER PTHR10491 1 288 4.2E-47 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family VV93_RS01725 6ea0131b0cf349f73a6d092a49a1a416 290 SUPERFAMILY SSF51735 1 284 2.9E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS01725 6ea0131b0cf349f73a6d092a49a1a416 290 PANTHER PTHR10491:SF4 1 288 4.2E-47 T 23-04-2016 VV93_RS01725 6ea0131b0cf349f73a6d092a49a1a416 290 Pfam PF04321 RmlD substrate binding domain 1 163 3.8E-28 T 23-04-2016 IPR029903 RmlD-like substrate binding domain VV93_RS01725 6ea0131b0cf349f73a6d092a49a1a416 290 Gene3D G3DSA:3.40.50.720 1 163 2.2E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS11295 63904c8cdc64ac5c56190d86da152a0e 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.298 T 23-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 VV93_RS11295 63904c8cdc64ac5c56190d86da152a0e 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 3.0E-64 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like VV93_RS11295 63904c8cdc64ac5c56190d86da152a0e 208 Gene3D G3DSA:3.40.50.2020 2 208 2.1E-74 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like VV93_RS11295 63904c8cdc64ac5c56190d86da152a0e 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 7.7E-92 T 23-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 VV93_RS11295 63904c8cdc64ac5c56190d86da152a0e 208 SUPERFAMILY SSF53271 3 206 2.49E-66 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like VV93_RS11295 63904c8cdc64ac5c56190d86da152a0e 208 PANTHER PTHR10285 1 197 6.8E-101 T 23-04-2016 VV93_RS13380 d7cbe961dd99a7ee6b0841e82db4a78c 331 Pfam PF01435 Peptidase family M48 155 330 2.3E-26 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VV93_RS13380 d7cbe961dd99a7ee6b0841e82db4a78c 331 PANTHER PTHR22726 95 330 2.8E-42 T 23-04-2016 VV93_RS13380 d7cbe961dd99a7ee6b0841e82db4a78c 331 Gene3D G3DSA:3.30.2010.10 152 235 1.2E-11 T 23-04-2016 VV93_RS13380 d7cbe961dd99a7ee6b0841e82db4a78c 331 PANTHER PTHR22726:SF7 95 330 2.8E-42 T 23-04-2016 VV93_RS02600 93b237097530b7d7265e97b7959c0d84 203 SMART SM01207 10 185 9.1E-82 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VV93_RS02600 93b237097530b7d7265e97b7959c0d84 203 PANTHER PTHR30309 1 203 2.7E-91 T 23-04-2016 VV93_RS02600 93b237097530b7d7265e97b7959c0d84 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 3.4E-49 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VV93_RS02600 93b237097530b7d7265e97b7959c0d84 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.708 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VV93_RS02600 93b237097530b7d7265e97b7959c0d84 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 194 2.7E-72 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VV93_RS02600 93b237097530b7d7265e97b7959c0d84 203 PANTHER PTHR30309:SF0 1 203 2.7E-91 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VV93_RS11970 a00c24aaa7880afb049c393584f0d1f5 150 Pfam PF07811 TadE-like protein 17 59 5.1E-10 T 23-04-2016 IPR012495 TadE-like VV93_RS14470 151bb4bbdf380782acf543d2cb51c149 176 Pfam PF04186 FxsA cytoplasmic membrane protein 7 114 1.2E-35 T 23-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 VV93_RS14470 151bb4bbdf380782acf543d2cb51c149 176 PANTHER PTHR35335:SF1 1 173 7.2E-41 T 23-04-2016 VV93_RS14470 151bb4bbdf380782acf543d2cb51c149 176 PANTHER PTHR35335 1 173 7.2E-41 T 23-04-2016 VV93_RS12760 031dd5114c2c5c27e0dfe38c2d4ab5d2 255 Pfam PF01975 Survival protein SurE 11 189 9.5E-60 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VV93_RS12760 031dd5114c2c5c27e0dfe38c2d4ab5d2 255 Gene3D G3DSA:3.40.1210.10 10 254 6.3E-91 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VV93_RS12760 031dd5114c2c5c27e0dfe38c2d4ab5d2 255 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 9 255 41.229 T 23-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VV93_RS12760 031dd5114c2c5c27e0dfe38c2d4ab5d2 255 PANTHER PTHR30457 9 252 3.3E-102 T 23-04-2016 VV93_RS12760 031dd5114c2c5c27e0dfe38c2d4ab5d2 255 SUPERFAMILY SSF64167 9 253 3.01E-87 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VV93_RS12760 031dd5114c2c5c27e0dfe38c2d4ab5d2 255 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 10 240 1.5E-75 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VV93_RS03755 9a4634c6512a81064ec265f9c76da78f 211 Pfam PF11726 Protein of unknown function (DUF3296) 35 210 7.2E-55 T 23-04-2016 IPR021723 Inovirus Gp2 VV93_RS09225 a9eba4e13687819bc1e2d6bbb0c18cb0 127 PANTHER PTHR21366 1 125 6.0E-59 T 23-04-2016 VV93_RS09225 a9eba4e13687819bc1e2d6bbb0c18cb0 127 Gene3D G3DSA:3.10.180.10 8 125 4.9E-32 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS09225 a9eba4e13687819bc1e2d6bbb0c18cb0 127 SUPERFAMILY SSF54593 5 124 6.05E-24 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS09225 a9eba4e13687819bc1e2d6bbb0c18cb0 127 PANTHER PTHR21366:SF15 1 125 6.0E-59 T 23-04-2016 VV93_RS09225 a9eba4e13687819bc1e2d6bbb0c18cb0 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 123 1.7E-6 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV93_RS09310 a590465a3649a53c9b2070c892a6c485 158 PANTHER PTHR26402 4 134 4.0E-50 T 23-04-2016 VV93_RS09310 a590465a3649a53c9b2070c892a6c485 158 SUPERFAMILY SSF52172 1 133 3.7E-23 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS09310 a590465a3649a53c9b2070c892a6c485 158 SMART SM00448 4 125 2.6E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS09310 a590465a3649a53c9b2070c892a6c485 158 PANTHER PTHR26402:SF515 4 134 4.0E-50 T 23-04-2016 VV93_RS09310 a590465a3649a53c9b2070c892a6c485 158 Gene3D G3DSA:3.40.50.2300 5 129 1.1E-24 T 23-04-2016 VV93_RS09310 a590465a3649a53c9b2070c892a6c485 158 Pfam PF00072 Response regulator receiver domain 7 125 8.7E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS01535 2635913053802872d1ba1350e6166da9 351 PIRSF PIRSF001361 1 351 1.0E-144 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VV93_RS01535 2635913053802872d1ba1350e6166da9 351 SUPERFAMILY SSF51569 17 347 6.28E-121 T 23-04-2016 VV93_RS01535 2635913053802872d1ba1350e6166da9 351 PANTHER PTHR21225 16 349 1.6E-191 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VV93_RS01535 2635913053802872d1ba1350e6166da9 351 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 15 349 6.9E-148 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VV93_RS01535 2635913053802872d1ba1350e6166da9 351 Pfam PF00793 DAHP synthetase I family 45 338 2.2E-92 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VV93_RS01535 2635913053802872d1ba1350e6166da9 351 Gene3D G3DSA:3.20.20.70 15 350 3.4E-138 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS06780 5d34333a5cfc77452a4ede737ee38978 381 PANTHER PTHR30006 3 207 8.7E-156 T 23-04-2016 VV93_RS06780 5d34333a5cfc77452a4ede737ee38978 381 PANTHER PTHR30006 225 381 8.7E-156 T 23-04-2016 VV93_RS06780 5d34333a5cfc77452a4ede737ee38978 381 PIRSF PIRSF029172 1 381 2.2E-170 T 23-04-2016 IPR027020 Protein ynjB VV93_RS06780 5d34333a5cfc77452a4ede737ee38978 381 PANTHER PTHR30006:SF12 3 207 8.7E-156 T 23-04-2016 VV93_RS06780 5d34333a5cfc77452a4ede737ee38978 381 PANTHER PTHR30006:SF12 225 381 8.7E-156 T 23-04-2016 VV93_RS06780 5d34333a5cfc77452a4ede737ee38978 381 Gene3D G3DSA:3.40.190.10 154 314 7.0E-12 T 23-04-2016 VV93_RS06780 5d34333a5cfc77452a4ede737ee38978 381 SUPERFAMILY SSF53850 33 379 1.09E-39 T 23-04-2016 VV93_RS06780 5d34333a5cfc77452a4ede737ee38978 381 Gene3D G3DSA:3.40.190.10 315 353 3.8E-19 T 23-04-2016 VV93_RS06780 5d34333a5cfc77452a4ede737ee38978 381 Gene3D G3DSA:3.40.190.10 32 152 3.8E-19 T 23-04-2016 VV93_RS06780 5d34333a5cfc77452a4ede737ee38978 381 Pfam PF13416 Bacterial extracellular solute-binding protein 59 332 3.8E-24 T 23-04-2016 VV93_RS02595 ebaa8e85a1101e788b91a8030289d1e3 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 4.9E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VV93_RS02595 ebaa8e85a1101e788b91a8030289d1e3 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 4.9E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VV93_RS02595 ebaa8e85a1101e788b91a8030289d1e3 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 4.9E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VV93_RS02595 ebaa8e85a1101e788b91a8030289d1e3 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 4.9E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VV93_RS02595 ebaa8e85a1101e788b91a8030289d1e3 272 PANTHER PTHR10992 3 268 5.5E-103 T 23-04-2016 VV93_RS02595 ebaa8e85a1101e788b91a8030289d1e3 272 Gene3D G3DSA:3.40.50.1820 2 267 7.5E-55 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS02595 ebaa8e85a1101e788b91a8030289d1e3 272 SUPERFAMILY SSF53474 1 267 7.8E-58 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold VV93_RS02595 ebaa8e85a1101e788b91a8030289d1e3 272 Pfam PF00561 alpha/beta hydrolase fold 23 253 5.4E-17 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VV93_RS02595 ebaa8e85a1101e788b91a8030289d1e3 272 PANTHER PTHR10992:SF885 3 268 5.5E-103 T 23-04-2016 VV93_RS09550 69a6371013b6553019ade219a6bc506b 341 Pfam PF09375 Imelysin 42 319 3.1E-45 T 23-04-2016 VV93_RS01530 9d93b82e01b8c50db874318d3153b9af 359 Gene3D G3DSA:3.90.1150.10 242 358 1.9E-12 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS01530 9d93b82e01b8c50db874318d3153b9af 359 Gene3D G3DSA:3.40.640.10 17 238 5.9E-54 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS01530 9d93b82e01b8c50db874318d3153b9af 359 SUPERFAMILY SSF53383 16 358 6.58E-71 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS01530 9d93b82e01b8c50db874318d3153b9af 359 PIRSF PIRSF000390 1 359 2.8E-85 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VV93_RS01530 9d93b82e01b8c50db874318d3153b9af 359 PANTHER PTHR30244:SF9 1 359 5.6E-122 T 23-04-2016 VV93_RS01530 9d93b82e01b8c50db874318d3153b9af 359 PANTHER PTHR30244 1 359 5.6E-122 T 23-04-2016 VV93_RS01530 9d93b82e01b8c50db874318d3153b9af 359 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 17 353 3.2E-73 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VV93_RS10735 971428b54437116d6d18dbfbfa09db30 504 SUPERFAMILY SSF56235 2 256 7.98E-72 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VV93_RS10735 971428b54437116d6d18dbfbfa09db30 504 PANTHER PTHR11907 1 477 1.1E-257 T 23-04-2016 VV93_RS10735 971428b54437116d6d18dbfbfa09db30 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 2.2E-165 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 VV93_RS10735 971428b54437116d6d18dbfbfa09db30 504 Pfam PF00156 Phosphoribosyl transferase domain 280 391 2.4E-6 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VV93_RS10735 971428b54437116d6d18dbfbfa09db30 504 Gene3D G3DSA:3.60.20.10 2 257 1.3E-64 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VV93_RS10735 971428b54437116d6d18dbfbfa09db30 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 465 44.649 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 VV93_RS10735 971428b54437116d6d18dbfbfa09db30 504 Gene3D G3DSA:3.40.50.2020 270 443 2.7E-46 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like VV93_RS10735 971428b54437116d6d18dbfbfa09db30 504 SUPERFAMILY SSF53271 249 482 3.15E-68 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like VV93_RS10735 971428b54437116d6d18dbfbfa09db30 504 PIRSF PIRSF000485 1 480 2.5E-169 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 VV93_RS10735 971428b54437116d6d18dbfbfa09db30 504 PANTHER PTHR11907:SF0 1 477 1.1E-257 T 23-04-2016 VV93_RS10735 971428b54437116d6d18dbfbfa09db30 504 Pfam PF13522 Glutamine amidotransferase domain 64 207 3.4E-17 T 23-04-2016 VV93_RS09755 dfc2306f3416e797f8d5629204527d48 129 Gene3D G3DSA:3.10.450.50 1 107 7.5E-14 T 23-04-2016 IPR032710 NTF2-like domain VV93_RS09755 dfc2306f3416e797f8d5629204527d48 129 Pfam PF12680 SnoaL-like domain 7 101 2.0E-8 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain VV93_RS09755 dfc2306f3416e797f8d5629204527d48 129 SUPERFAMILY SSF54427 1 123 2.17E-31 T 23-04-2016 IPR032710 NTF2-like domain VV93_RS10520 431312cce890d4d87f83b823b31e4252 129 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 2.5E-27 T 23-04-2016 IPR010824 Protein of unknown function DUF1425 VV93_RS07605 b85af8e5d8fa6c17ca2e29d96477bd44 126 PANTHER PTHR33993:SF4 1 126 6.6E-50 T 23-04-2016 VV93_RS07605 b85af8e5d8fa6c17ca2e29d96477bd44 126 PANTHER PTHR33993 1 126 6.6E-50 T 23-04-2016 VV93_RS07605 b85af8e5d8fa6c17ca2e29d96477bd44 126 Gene3D G3DSA:3.10.180.10 6 125 3.3E-31 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS07605 b85af8e5d8fa6c17ca2e29d96477bd44 126 SUPERFAMILY SSF54593 1 125 1.34E-21 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS09385 21a516b04c8d735eb7e9ab40e31fb062 417 PANTHER PTHR32195 13 417 1.5E-189 T 23-04-2016 VV93_RS09385 21a516b04c8d735eb7e9ab40e31fb062 417 PANTHER PTHR32195:SF19 13 417 1.5E-189 T 23-04-2016 VV93_RS09385 21a516b04c8d735eb7e9ab40e31fb062 417 Pfam PF03222 Tryptophan/tyrosine permease family 28 413 8.9E-18 T 23-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 VV93_RS00815 0b6b2fa748e15169f99d3945b8b1dbdc 373 SMART SM00974 259 353 3.2E-27 T 23-04-2016 IPR018306 Bacteriophage T5, Orf172 DNA-binding VV93_RS00815 0b6b2fa748e15169f99d3945b8b1dbdc 373 Pfam PF10544 T5orf172 domain 243 353 7.1E-14 T 23-04-2016 IPR018306 Bacteriophage T5, Orf172 DNA-binding VV93_RS03610 7c0e5874638b8631bc75e221e2d4d494 372 SUPERFAMILY SSF56014 265 354 2.28E-11 T 23-04-2016 VV93_RS03610 7c0e5874638b8631bc75e221e2d4d494 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 4.8E-127 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 VV93_RS03610 7c0e5874638b8631bc75e221e2d4d494 372 Pfam PF04551 GcpE protein 14 354 1.0E-132 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 VV93_RS03610 7c0e5874638b8631bc75e221e2d4d494 372 Gene3D G3DSA:3.20.20.70 29 132 2.0E-9 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS03610 7c0e5874638b8631bc75e221e2d4d494 372 PANTHER PTHR30454 1 368 6.1E-225 T 23-04-2016 VV93_RS03610 7c0e5874638b8631bc75e221e2d4d494 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.17 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 VV93_RS03610 7c0e5874638b8631bc75e221e2d4d494 372 PIRSF PIRSF004640 1 364 1.0E-147 T 23-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 VV93_RS03610 7c0e5874638b8631bc75e221e2d4d494 372 SUPERFAMILY SSF51717 15 208 3.92E-10 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 VV93_RS09520 e6fdfdfc0a2708a8fc666ea4b3ec0604 132 Gene3D G3DSA:1.10.10.10 58 131 5.4E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS00915 3fc4ea37d1e1915b69d36fc2fdb763b6 78 Pfam PF02416 mttA/Hcf106 family 4 61 1.1E-14 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VV93_RS00915 3fc4ea37d1e1915b69d36fc2fdb763b6 78 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 74 25.967 T 23-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VV93_RS00915 3fc4ea37d1e1915b69d36fc2fdb763b6 78 PANTHER PTHR33162 1 76 6.3E-23 T 23-04-2016 VV93_RS00915 3fc4ea37d1e1915b69d36fc2fdb763b6 78 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 49 9.4E-23 T 23-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VV93_RS00650 bf2a6bfceea6fe7bd0f0d9bcf6e02696 725 Gene3D G3DSA:1.10.443.10 339 543 1.5E-5 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS00650 bf2a6bfceea6fe7bd0f0d9bcf6e02696 725 SUPERFAMILY SSF56349 496 544 6.83E-6 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS00650 bf2a6bfceea6fe7bd0f0d9bcf6e02696 725 SUPERFAMILY SSF56349 331 469 6.83E-6 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS01715 599dbe02f5f9e1b1ae03507fd03a03a0 490 Pfam PF03023 MviN-like protein 27 457 1.3E-18 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VV93_RS04930 27085369eeea873b39ea238be46dfa70 261 PANTHER PTHR24220:SF466 6 244 5.7E-123 T 23-04-2016 VV93_RS04930 27085369eeea873b39ea238be46dfa70 261 SUPERFAMILY SSF52540 3 216 1.22E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04930 27085369eeea873b39ea238be46dfa70 261 Pfam PF00005 ABC transporter 20 148 1.7E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS04930 27085369eeea873b39ea238be46dfa70 261 PANTHER PTHR24220 6 244 5.7E-123 T 23-04-2016 VV93_RS04930 27085369eeea873b39ea238be46dfa70 261 Gene3D G3DSA:3.40.50.300 3 216 2.2E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS04930 27085369eeea873b39ea238be46dfa70 261 SMART SM00382 29 198 1.9E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS15130 e54ba449264c69acadf5ce8ecf303baa 324 Pfam PF11059 Protein of unknown function (DUF2860) 32 323 3.6E-111 T 23-04-2016 IPR016896 Protein of unknown function DUF2860 VV93_RS15130 e54ba449264c69acadf5ce8ecf303baa 324 PIRSF PIRSF028696 1 324 3.9E-128 T 23-04-2016 IPR016896 Protein of unknown function DUF2860 VV93_RS03955 f8a170ce67954480117810a401b61b2b 519 PANTHER PTHR30282 5 519 0.0 T 23-04-2016 VV93_RS03955 f8a170ce67954480117810a401b61b2b 519 Pfam PF03806 AbgT putative transporter family 19 517 1.3E-211 T 23-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VV93_RS03955 f8a170ce67954480117810a401b61b2b 519 PANTHER PTHR30282:SF1 5 519 0.0 T 23-04-2016 VV93_RS05145 75fd86949244cd3f1120aa6b1948d8ea 86 SUPERFAMILY SSF47336 5 85 5.23E-14 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain VV93_RS05145 75fd86949244cd3f1120aa6b1948d8ea 86 Gene3D G3DSA:1.10.1200.10 2 83 4.7E-18 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain VV93_RS05145 75fd86949244cd3f1120aa6b1948d8ea 86 Pfam PF00550 Phosphopantetheine attachment site 7 80 5.8E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain VV93_RS07820 5a9846659f794abfef9873e4324eda13 568 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 548 568 0.0016 T 23-04-2016 IPR020008 GlyGly-CTERM domain VV93_RS07820 5a9846659f794abfef9873e4324eda13 568 Pfam PF11949 Protein of unknown function (DUF3466) 6 179 3.1E-11 T 23-04-2016 IPR022562 Protein of unknown function DUF3466 VV93_RS07820 5a9846659f794abfef9873e4324eda13 568 Pfam PF11949 Protein of unknown function (DUF3466) 234 568 2.1E-54 T 23-04-2016 IPR022562 Protein of unknown function DUF3466 VV93_RS05235 f94905207c181d85877430327cb3e74f 652 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 67 224 1.2E-30 T 23-04-2016 IPR024618 Domain of unknown function DUF3857 VV93_RS05235 f94905207c181d85877430327cb3e74f 652 SUPERFAMILY SSF54001 245 394 3.14E-8 T 23-04-2016 VV93_RS00450 de12f9a1073d657a24fb99f22e5c192b 316 Gene3D G3DSA:1.10.443.10 123 298 9.7E-51 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS00450 de12f9a1073d657a24fb99f22e5c192b 316 SUPERFAMILY SSF47823 16 107 1.0E-12 T 23-04-2016 IPR010998 Integrase, Lambda-type, N-terminal VV93_RS00450 de12f9a1073d657a24fb99f22e5c192b 316 SUPERFAMILY SSF56349 116 302 3.53E-52 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS00450 de12f9a1073d657a24fb99f22e5c192b 316 Pfam PF00589 Phage integrase family 122 290 8.4E-50 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS00450 de12f9a1073d657a24fb99f22e5c192b 316 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 3.9E-20 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VV93_RS00450 de12f9a1073d657a24fb99f22e5c192b 316 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 19 306 1.4E-107 T 23-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 VV93_RS00450 de12f9a1073d657a24fb99f22e5c192b 316 Gene3D G3DSA:1.10.150.130 15 110 2.2E-22 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal VV93_RS00450 de12f9a1073d657a24fb99f22e5c192b 316 PANTHER PTHR30349:SF17 13 316 9.1E-155 T 23-04-2016 VV93_RS00450 de12f9a1073d657a24fb99f22e5c192b 316 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 304 35.508 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD VV93_RS00450 de12f9a1073d657a24fb99f22e5c192b 316 PANTHER PTHR30349 13 316 9.1E-155 T 23-04-2016 VV93_RS11140 b5eaeac73ed76c566baf8c41ef97f865 339 PIRSF PIRSF026343 4 339 2.3E-127 T 23-04-2016 IPR014524 Outer membrane protein assembly factor BamC VV93_RS11140 b5eaeac73ed76c566baf8c41ef97f865 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 337 33.995 T 23-04-2016 IPR014524 Outer membrane protein assembly factor BamC VV93_RS11140 b5eaeac73ed76c566baf8c41ef97f865 339 Pfam PF06804 NlpB/DapX lipoprotein 36 335 2.5E-105 T 23-04-2016 IPR010653 NlpB/DapX lipoprotein VV93_RS02905 7408a970e473cbc2adcb6b8605dfba43 273 Gene3D G3DSA:3.40.50.1980 21 128 4.4E-28 T 23-04-2016 VV93_RS02905 7408a970e473cbc2adcb6b8605dfba43 273 PANTHER PTHR30535 18 266 6.0E-50 T 23-04-2016 VV93_RS02905 7408a970e473cbc2adcb6b8605dfba43 273 Pfam PF01497 Periplasmic binding protein 24 245 2.4E-22 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 VV93_RS02905 7408a970e473cbc2adcb6b8605dfba43 273 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 270 51.391 T 23-04-2016 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 VV93_RS02905 7408a970e473cbc2adcb6b8605dfba43 273 Gene3D G3DSA:3.40.50.1980 142 266 5.2E-35 T 23-04-2016 VV93_RS02905 7408a970e473cbc2adcb6b8605dfba43 273 SUPERFAMILY SSF53807 20 266 5.1E-57 T 23-04-2016 VV93_RS10175 605a2798b8fb4149162b81d1844492cb 240 Pfam PF04288 MukE-like family 10 234 5.0E-118 T 23-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VV93_RS10175 605a2798b8fb4149162b81d1844492cb 240 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 237 51.49 T 23-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VV93_RS08910 02531546c89742f535904ecc001789c4 136 Gene3D G3DSA:3.40.190.10 22 133 1.4E-8 T 23-04-2016 VV93_RS08910 02531546c89742f535904ecc001789c4 136 SUPERFAMILY SSF53850 17 133 3.8E-13 T 23-04-2016 VV93_RS07740 65b1ccf3478acebddd22de9d62bb5527 278 PIRSF PIRSF012524 1 278 2.5E-99 T 23-04-2016 IPR014464 Conserved virulence factor B VV93_RS07740 65b1ccf3478acebddd22de9d62bb5527 278 PANTHER PTHR37296 1 278 5.2E-109 T 23-04-2016 VV93_RS07740 65b1ccf3478acebddd22de9d62bb5527 278 Pfam PF13509 S1 domain 4 64 3.4E-22 T 23-04-2016 VV93_RS07740 65b1ccf3478acebddd22de9d62bb5527 278 Pfam PF13509 S1 domain 71 132 5.0E-5 T 23-04-2016 VV93_RS02455 4889c3078d60488f08ca953b5f179916 329 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 19 293 8.5E-59 T 23-04-2016 IPR002729 CRISPR-associated protein Cas1 VV93_RS02455 4889c3078d60488f08ca953b5f179916 329 Pfam PF01867 CRISPR associated protein Cas1 24 303 3.1E-28 T 23-04-2016 IPR002729 CRISPR-associated protein Cas1 VV93_RS02455 4889c3078d60488f08ca953b5f179916 329 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 19 327 10.839 T 23-04-2016 IPR002729 CRISPR-associated protein Cas1 VV93_RS02455 4889c3078d60488f08ca953b5f179916 329 TIGRFAM TIGR03637 cas1_YPEST: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST 12 315 7.3E-145 T 23-04-2016 IPR019857 CRISPR-associated protein Cas1, YPEST subtype VV93_RS02005 98ebdf8a56301fbeef5e4fc912b0e101 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 1.0E-10 T 23-04-2016 IPR025857 MacB-like periplasmic core domain VV93_RS02005 98ebdf8a56301fbeef5e4fc912b0e101 419 PANTHER PTHR30489:SF2 224 418 2.2E-108 T 23-04-2016 VV93_RS02005 98ebdf8a56301fbeef5e4fc912b0e101 419 PANTHER PTHR30489:SF2 1 204 2.2E-108 T 23-04-2016 VV93_RS02005 98ebdf8a56301fbeef5e4fc912b0e101 419 Pfam PF02687 FtsX-like permease family 293 410 1.0E-18 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VV93_RS02005 98ebdf8a56301fbeef5e4fc912b0e101 419 PANTHER PTHR30489 224 418 2.2E-108 T 23-04-2016 VV93_RS02005 98ebdf8a56301fbeef5e4fc912b0e101 419 PANTHER PTHR30489 1 204 2.2E-108 T 23-04-2016 VV93_RS09290 cec1d0dd3e26d9e465622c764a4b7c22 292 Pfam PF03547 Membrane transport protein 172 284 8.0E-8 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 VV93_RS09290 cec1d0dd3e26d9e465622c764a4b7c22 292 Pfam PF03547 Membrane transport protein 5 152 1.3E-7 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 VV93_RS09290 cec1d0dd3e26d9e465622c764a4b7c22 292 PANTHER PTHR36838:SF2 1 291 2.2E-102 T 23-04-2016 VV93_RS09290 cec1d0dd3e26d9e465622c764a4b7c22 292 PANTHER PTHR36838 1 291 2.2E-102 T 23-04-2016 VV93_RS10020 de7a529d572e695f1063adc2b3e15bee 138 PANTHER PTHR40043:SF1 4 138 1.3E-33 T 23-04-2016 VV93_RS10020 de7a529d572e695f1063adc2b3e15bee 138 PANTHER PTHR40043 4 138 1.3E-33 T 23-04-2016 VV93_RS10020 de7a529d572e695f1063adc2b3e15bee 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 4.2E-11 T 23-04-2016 IPR007140 Protein of unknown function DUF350 VV93_RS10020 de7a529d572e695f1063adc2b3e15bee 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 2.3E-12 T 23-04-2016 IPR007140 Protein of unknown function DUF350 VV93_RS05855 e7cff711f6c96ab4d5e7d0d2ff5cd408 41 Pfam PF08056 Tryptophan operon leader peptide 1 41 1.2E-30 T 23-04-2016 IPR012639 Tryptophan operon leader peptide VV93_RS05855 e7cff711f6c96ab4d5e7d0d2ff5cd408 41 ProDom PD926058 BIOSYNTHESIS PEPTIDE LEADER AROMATIC VC1176 VV1222 OPERON ACID AMINO AMINO-ACID 1 41 1.0E-7 T 23-04-2016 IPR012639 Tryptophan operon leader peptide VV93_RS10525 f98a9a694e50ff24ebfabbd4662055b0 480 SUPERFAMILY SSF48452 220 277 1.01E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS10525 f98a9a694e50ff24ebfabbd4662055b0 480 SUPERFAMILY SSF48452 136 176 1.01E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS10525 f98a9a694e50ff24ebfabbd4662055b0 480 Gene3D G3DSA:1.25.40.10 145 275 1.1E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS08520 962328b0936a2cf9896a6ef2cdd5a279 140 SUPERFAMILY SSF54593 7 133 1.79E-21 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS08520 962328b0936a2cf9896a6ef2cdd5a279 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 130 4.7E-5 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV93_RS08520 962328b0936a2cf9896a6ef2cdd5a279 140 Gene3D G3DSA:3.10.180.10 4 138 1.2E-45 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV93_RS08370 ba737f7bee492114b27d137cd86216ee 166 Pfam PF10754 Protein of unknown function (DUF2569) 13 162 1.5E-27 T 23-04-2016 IPR019690 Protein of unknown function DUF2569 VV93_RS15240 a763e3cab7f55bf90a4c7c408c714df7 257 Pfam PF13614 AAA domain 2 178 2.0E-62 T 23-04-2016 IPR025669 AAA domain VV93_RS15240 a763e3cab7f55bf90a4c7c408c714df7 257 SUPERFAMILY SSF52540 2 254 5.57E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15240 a763e3cab7f55bf90a4c7c408c714df7 257 Gene3D G3DSA:3.40.50.300 3 254 2.8E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS15240 a763e3cab7f55bf90a4c7c408c714df7 257 PANTHER PTHR13696 2 254 1.2E-90 T 23-04-2016 VV93_RS15240 a763e3cab7f55bf90a4c7c408c714df7 257 PANTHER PTHR13696:SF52 2 254 1.2E-90 T 23-04-2016 VV93_RS06710 58e18ab1053fa47d37e65acdd4bb830f 402 Gene3D G3DSA:3.90.1150.10 257 389 1.9E-35 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VV93_RS06710 58e18ab1053fa47d37e65acdd4bb830f 402 PANTHER PTHR11808:SF45 1 392 8.8E-267 T 23-04-2016 VV93_RS06710 58e18ab1053fa47d37e65acdd4bb830f 402 PANTHER PTHR11808 1 392 8.8E-267 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VV93_RS06710 58e18ab1053fa47d37e65acdd4bb830f 402 PIRSF PIRSF001434 1 391 8.8E-125 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VV93_RS06710 58e18ab1053fa47d37e65acdd4bb830f 402 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 3.9E-171 T 23-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 VV93_RS06710 58e18ab1053fa47d37e65acdd4bb830f 402 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VV93_RS06710 58e18ab1053fa47d37e65acdd4bb830f 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 388 2.2E-116 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VV93_RS06710 58e18ab1053fa47d37e65acdd4bb830f 402 Gene3D G3DSA:3.40.640.10 6 255 3.8E-83 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VV93_RS06710 58e18ab1053fa47d37e65acdd4bb830f 402 SUPERFAMILY SSF53383 21 388 1.48E-99 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VV93_RS04500 f1e8256c6132b6cd22e9178247c619fd 364 Gene3D G3DSA:2.40.160.10 32 329 4.2E-36 T 23-04-2016 IPR023614 Porin domain VV93_RS04500 f1e8256c6132b6cd22e9178247c619fd 364 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 356 364 4.7E-7 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VV93_RS04500 f1e8256c6132b6cd22e9178247c619fd 364 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 59 70 4.7E-7 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VV93_RS04500 f1e8256c6132b6cd22e9178247c619fd 364 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 106 116 4.7E-7 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VV93_RS04500 f1e8256c6132b6cd22e9178247c619fd 364 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 162 173 4.7E-7 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VV93_RS04500 f1e8256c6132b6cd22e9178247c619fd 364 SUPERFAMILY SSF56935 32 364 7.94E-39 T 23-04-2016 VV93_RS04500 f1e8256c6132b6cd22e9178247c619fd 364 Pfam PF13609 Gram-negative porin 11 327 1.4E-32 T 23-04-2016 VV93_RS13715 4391450833a5ace7cfcf3748ae7039fb 72 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 1.9E-25 T 23-04-2016 IPR014318 Phage shock protein, PspG VV93_RS13715 4391450833a5ace7cfcf3748ae7039fb 72 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 3.6E-24 T 23-04-2016 IPR014318 Phage shock protein, PspG VV93_RS16925 3ce983359457dec5f368c4e456894508 442 PANTHER PTHR15730 373 442 3.9E-33 T 23-04-2016 VV93_RS16925 3ce983359457dec5f368c4e456894508 442 Pfam PF13322 Domain of unknown function (DUF4092) 1 24 4.6E-10 T 23-04-2016 IPR025385 Domain of unknown function DUF4092 VV93_RS16925 3ce983359457dec5f368c4e456894508 442 PANTHER PTHR15730:SF7 373 442 3.9E-33 T 23-04-2016 VV93_RS11010 0109011c1d15e5a7175e171cd8753168 682 Pfam PF02120 Flagellar hook-length control protein FliK 553 636 6.7E-25 T 23-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal VV93_RS11010 0109011c1d15e5a7175e171cd8753168 682 PANTHER PTHR37533 418 682 2.0E-50 T 23-04-2016 VV93_RS11010 0109011c1d15e5a7175e171cd8753168 682 PANTHER PTHR37533:SF2 418 682 2.0E-50 T 23-04-2016 VV93_RS09220 5c67e857ee0b14b644a2e2ad5aa7f172 380 Gene3D G3DSA:3.30.450.40 36 147 1.1E-9 T 23-04-2016 IPR029016 GAF domain-like VV93_RS09220 5c67e857ee0b14b644a2e2ad5aa7f172 380 Gene3D G3DSA:1.10.3210.10 173 342 7.7E-15 T 23-04-2016 IPR006674 HD domain VV93_RS09220 5c67e857ee0b14b644a2e2ad5aa7f172 380 Pfam PF13487 HD domain 241 310 7.9E-14 T 23-04-2016 VV93_RS09220 5c67e857ee0b14b644a2e2ad5aa7f172 380 SUPERFAMILY SSF55781 36 152 4.14E-10 T 23-04-2016 IPR029016 GAF domain-like VV93_RS09220 5c67e857ee0b14b644a2e2ad5aa7f172 380 SUPERFAMILY SSF109604 183 359 9.42E-23 T 23-04-2016 VV93_RS07200 5c8acc06769406cc8cf82e358a086604 271 SUPERFAMILY SSF53850 44 254 4.45E-31 T 23-04-2016 VV93_RS07200 5c8acc06769406cc8cf82e358a086604 271 Gene3D G3DSA:3.40.190.10 121 212 3.5E-6 T 23-04-2016 VV93_RS07200 5c8acc06769406cc8cf82e358a086604 271 PANTHER PTHR38834:SF1 3 271 1.3E-84 T 23-04-2016 VV93_RS07200 5c8acc06769406cc8cf82e358a086604 271 PANTHER PTHR38834 3 271 1.3E-84 T 23-04-2016 VV93_RS07200 5c8acc06769406cc8cf82e358a086604 271 Gene3D G3DSA:3.40.190.10 226 254 1.5E-7 T 23-04-2016 VV93_RS07200 5c8acc06769406cc8cf82e358a086604 271 Gene3D G3DSA:3.40.190.10 46 120 1.5E-7 T 23-04-2016 VV93_RS07200 5c8acc06769406cc8cf82e358a086604 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 253 1.2E-19 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV93_RS01215 87bc579252fbcebf7141ba3e4eff4a8c 254 Pfam PF11932 Protein of unknown function (DUF3450) 12 249 1.6E-90 T 23-04-2016 IPR016866 Uncharacterised conserved protein UCP028069 VV93_RS01215 87bc579252fbcebf7141ba3e4eff4a8c 254 PIRSF PIRSF028069 4 254 6.5E-94 T 23-04-2016 IPR016866 Uncharacterised conserved protein UCP028069 VV93_RS11895 89ab09588ac3dfdab0f37cb65394eec9 291 SUPERFAMILY SSF52266 97 284 1.48E-41 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain VV93_RS11895 89ab09588ac3dfdab0f37cb65394eec9 291 PANTHER PTHR30383 113 287 2.9E-15 T 23-04-2016 VV93_RS11895 89ab09588ac3dfdab0f37cb65394eec9 291 Gene3D G3DSA:3.40.50.1110 105 285 1.5E-38 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain VV93_RS11895 89ab09588ac3dfdab0f37cb65394eec9 291 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 124 274 1.1E-19 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain VV93_RS14355 046ce69f6fd065fd170dff133e6f8222 317 Pfam PF02272 DHHA1 domain 256 315 6.7E-6 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 VV93_RS14355 046ce69f6fd065fd170dff133e6f8222 317 SUPERFAMILY SSF64182 5 316 2.51E-40 T 23-04-2016 VV93_RS05170 135a2b947056f07599f58df95eff91fa 418 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 3.0E-7 T 23-04-2016 VV93_RS05170 135a2b947056f07599f58df95eff91fa 418 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 3.0E-7 T 23-04-2016 VV93_RS05170 135a2b947056f07599f58df95eff91fa 418 Gene3D G3DSA:3.50.50.60 2 180 1.1E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS05170 135a2b947056f07599f58df95eff91fa 418 Gene3D G3DSA:3.50.50.60 281 324 1.1E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS05170 135a2b947056f07599f58df95eff91fa 418 SUPERFAMILY SSF51905 285 380 1.7E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS05170 135a2b947056f07599f58df95eff91fa 418 SUPERFAMILY SSF51905 4 175 1.7E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV93_RS05170 135a2b947056f07599f58df95eff91fa 418 Pfam PF01494 FAD binding domain 6 164 2.1E-19 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 VV93_RS05170 135a2b947056f07599f58df95eff91fa 418 PANTHER PTHR10617 3 415 7.0E-124 T 23-04-2016 VV93_RS05170 135a2b947056f07599f58df95eff91fa 418 PANTHER PTHR10617:SF113 3 415 7.0E-124 T 23-04-2016 VV93_RS04720 3126ba1c18763d06324863ba8e2ac167 116 SUPERFAMILY SSF54913 1 102 9.45E-22 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VV93_RS04720 3126ba1c18763d06324863ba8e2ac167 116 SMART SM00938 6 104 1.0E-5 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV93_RS04720 3126ba1c18763d06324863ba8e2ac167 116 Gene3D G3DSA:3.30.70.120 3 103 1.0E-9 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VV93_RS04715 956c9989f50e61899ecdf76f48feb746 264 Pfam PF07556 Protein of unknown function (DUF1538) 21 246 3.8E-68 T 23-04-2016 IPR011435 Protein of unknown function DUF1538 VV93_RS14140 f1bfa9bf3f2f0702a8fe2ae3f53f407f 363 SUPERFAMILY SSF56935 39 351 9.3E-16 T 23-04-2016 VV93_RS11210 09ef9abc55f07f0f7bfd4316b8a8835d 111 SUPERFAMILY SSF47413 17 80 1.51E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS11210 09ef9abc55f07f0f7bfd4316b8a8835d 111 Pfam PF01381 Helix-turn-helix 28 81 5.2E-8 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV93_RS11210 09ef9abc55f07f0f7bfd4316b8a8835d 111 Gene3D G3DSA:1.10.260.40 20 80 4.6E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS11210 09ef9abc55f07f0f7bfd4316b8a8835d 111 SMART SM00530 27 82 8.3E-7 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV93_RS07260 731850767b0d5e19d08fdcd81d561b6e 280 Gene3D G3DSA:1.10.3720.10 5 269 9.0E-45 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS07260 731850767b0d5e19d08fdcd81d561b6e 280 PANTHER PTHR32243 1 278 5.4E-120 T 23-04-2016 VV93_RS07260 731850767b0d5e19d08fdcd81d561b6e 280 PANTHER PTHR32243:SF31 1 278 5.4E-120 T 23-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 VV93_RS07260 731850767b0d5e19d08fdcd81d561b6e 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 275 1.4E-13 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS07260 731850767b0d5e19d08fdcd81d561b6e 280 SUPERFAMILY SSF161098 7 277 3.92E-53 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VV93_RS14965 af2650aa78d751ab995d0b327be37594 143 Pfam PF13358 DDE superfamily endonuclease 9 112 1.9E-19 T 23-04-2016 VV93_RS11025 aa4b5ec6397351feba78795c5a1a7352 266 PANTHER PTHR34982:SF1 1 266 1.2E-77 T 23-04-2016 VV93_RS11025 aa4b5ec6397351feba78795c5a1a7352 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 2.1E-5 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VV93_RS11025 aa4b5ec6397351feba78795c5a1a7352 266 PRINTS PR01003 Flagellar assembly protein FliH signature 112 130 2.1E-5 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VV93_RS11025 aa4b5ec6397351feba78795c5a1a7352 266 PRINTS PR01003 Flagellar assembly protein FliH signature 89 111 2.1E-5 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VV93_RS11025 aa4b5ec6397351feba78795c5a1a7352 266 Pfam PF02108 Flagellar assembly protein FliH 125 252 1.6E-33 T 23-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VV93_RS11025 aa4b5ec6397351feba78795c5a1a7352 266 PANTHER PTHR34982 1 266 1.2E-77 T 23-04-2016 VV93_RS00150 915f31dd84f3adbc6051f874fe5c0355 172 Pfam PF13358 DDE superfamily endonuclease 7 146 6.4E-28 T 23-04-2016 VV93_RS06045 838838c1d1bb57d76686ea6ccf3b8753 173 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 36 169 3.4E-41 T 23-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VV93_RS06045 838838c1d1bb57d76686ea6ccf3b8753 173 SUPERFAMILY SSF52833 43 169 7.83E-29 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS06045 838838c1d1bb57d76686ea6ccf3b8753 173 Gene3D G3DSA:3.40.30.10 35 171 9.6E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold VV93_RS06045 838838c1d1bb57d76686ea6ccf3b8753 173 PANTHER PTHR10681 41 164 1.3E-29 T 23-04-2016 VV93_RS06045 838838c1d1bb57d76686ea6ccf3b8753 173 Pfam PF08534 Redoxin 53 160 2.0E-10 T 23-04-2016 IPR013740 Redoxin GO:0016491 VV93_RS06045 838838c1d1bb57d76686ea6ccf3b8753 173 PANTHER PTHR10681:SF107 41 164 1.3E-29 T 23-04-2016 VV93_RS00820 fec44744a0d14b61bb4a8dffec38e507 364 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 354 9.6E-66 T 23-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VV93_RS00820 fec44744a0d14b61bb4a8dffec38e507 364 PANTHER PTHR38772 2 364 2.1E-24 T 23-04-2016 VV93_RS16460 3eeef4fad765daa594989a8c9496969a 261 Gene3D G3DSA:2.40.50.100 94 137 9.8E-7 T 23-04-2016 VV93_RS16460 3eeef4fad765daa594989a8c9496969a 261 SUPERFAMILY SSF111369 96 178 3.01E-5 T 23-04-2016 VV93_RS16460 3eeef4fad765daa594989a8c9496969a 261 PANTHER PTHR30386 10 217 6.0E-34 T 23-04-2016 VV93_RS16460 3eeef4fad765daa594989a8c9496969a 261 PANTHER PTHR30386:SF7 10 217 6.0E-34 T 23-04-2016 VV93_RS16460 3eeef4fad765daa594989a8c9496969a 261 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 14 180 7.6E-17 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV93_RS13795 96ec137c85bd243e157715fd9022ae15 498 Gene3D G3DSA:3.40.50.300 27 149 1.9E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13795 96ec137c85bd243e157715fd9022ae15 498 SUPERFAMILY SSF52540 15 224 6.64E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS13795 96ec137c85bd243e157715fd9022ae15 498 Pfam PF13401 AAA domain 29 130 1.0E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS13795 96ec137c85bd243e157715fd9022ae15 498 Pfam PF05036 Sporulation related domain 411 484 3.6E-8 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 VV93_RS02615 a47e7cb7019d8aefc1146a0ebcacf812 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 2.0E-74 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VV93_RS02615 a47e7cb7019d8aefc1146a0ebcacf812 267 PANTHER PTHR30622:SF4 1 266 4.4E-129 T 23-04-2016 VV93_RS02615 a47e7cb7019d8aefc1146a0ebcacf812 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 1.7E-72 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VV93_RS02615 a47e7cb7019d8aefc1146a0ebcacf812 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.582 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VV93_RS02615 a47e7cb7019d8aefc1146a0ebcacf812 267 PANTHER PTHR30622 1 266 4.4E-129 T 23-04-2016 VV93_RS03745 72a52773a9e1cd2806eb535989a26467 453 Pfam PF07804 HipA-like C-terminal domain 315 389 4.9E-12 T 23-04-2016 IPR012893 HipA-like, C-terminal VV93_RS03745 72a52773a9e1cd2806eb535989a26467 453 Pfam PF07805 HipA-like N-terminal domain 166 261 1.2E-6 T 23-04-2016 IPR012894 HipA, N-terminal subdomain 2 VV93_RS03745 72a52773a9e1cd2806eb535989a26467 453 PIRSF PIRSF028135 1 453 2.0E-232 T 23-04-2016 IPR016869 Uncharacterised conserved protein UCP028135, HipA-like VV93_RS03135 4b40bb6ebe1d21adc51fa43ad39fcc1a 382 Pfam PF02690 Na+/Pi-cotransporter 218 329 7.6E-19 T 23-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 VV93_RS03135 4b40bb6ebe1d21adc51fa43ad39fcc1a 382 Pfam PF02690 Na+/Pi-cotransporter 30 150 1.6E-22 T 23-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 VV93_RS03135 4b40bb6ebe1d21adc51fa43ad39fcc1a 382 PANTHER PTHR10010:SF8 19 381 1.0E-129 T 23-04-2016 IPR030147 Sodium-dependent phosphate transporter NptA-like GO:0015114|GO:0035435 VV93_RS03135 4b40bb6ebe1d21adc51fa43ad39fcc1a 382 PANTHER PTHR10010 19 381 1.0E-129 T 23-04-2016 VV93_RS13980 64397f510c23b01e22dadb72f321b8af 256 Gene3D G3DSA:3.20.20.70 1 253 4.9E-99 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS13980 64397f510c23b01e22dadb72f321b8af 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 251 39.689 T 23-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VV93_RS13980 64397f510c23b01e22dadb72f321b8af 256 PANTHER PTHR21139 1 256 9.9E-123 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VV93_RS13980 64397f510c23b01e22dadb72f321b8af 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 23-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VV93_RS13980 64397f510c23b01e22dadb72f321b8af 256 SUPERFAMILY SSF51351 2 250 3.67E-89 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VV93_RS13980 64397f510c23b01e22dadb72f321b8af 256 Pfam PF00121 Triosephosphate isomerase 5 247 1.8E-87 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VV93_RS13980 64397f510c23b01e22dadb72f321b8af 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 6.9E-79 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VV93_RS11915 6d6368afab40f3fa7da588060eafe343 478 Pfam PF13520 Amino acid permease 11 442 4.0E-29 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VV93_RS11915 6d6368afab40f3fa7da588060eafe343 478 PIRSF PIRSF006060 1 475 6.5E-40 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VV93_RS21425 0e5769a5c9f17b4b88eb8afdb069e725 301 Gene3D G3DSA:3.30.2090.10 183 257 2.0E-6 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS21425 0e5769a5c9f17b4b88eb8afdb069e725 301 PANTHER PTHR32063:SF18 1 300 4.0E-112 T 23-04-2016 VV93_RS21425 0e5769a5c9f17b4b88eb8afdb069e725 301 SUPERFAMILY SSF82714 182 257 2.62E-9 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV93_RS21425 0e5769a5c9f17b4b88eb8afdb069e725 301 Pfam PF00873 AcrB/AcrD/AcrF family 2 285 2.4E-22 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VV93_RS21425 0e5769a5c9f17b4b88eb8afdb069e725 301 PANTHER PTHR32063 1 300 4.0E-112 T 23-04-2016 VV93_RS01995 460439edd27cc94ddaf0fb344c1bd416 300 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 39 288 2.2E-107 T 23-04-2016 IPR021254 Protein of unknown function DUF2806 VV93_RS01995 460439edd27cc94ddaf0fb344c1bd416 300 Pfam PF10987 Protein of unknown function (DUF2806) 60 278 1.3E-87 T 23-04-2016 IPR021254 Protein of unknown function DUF2806 VV93_RS05135 6c54027905fb3d8f9daee5a795c8f3f8 185 Pfam PF04279 Intracellular septation protein A 16 157 2.9E-6 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 VV93_RS08250 00a19241c840e22b0107dcb54cc0dec5 67 Pfam PF14255 Cysteine-rich CPXCG 10 59 9.9E-20 T 23-04-2016 IPR025990 Cysteine-rich CPXCG protein VV93_RS08250 00a19241c840e22b0107dcb54cc0dec5 67 PIRSF PIRSF037225 1 65 6.1E-28 T 23-04-2016 IPR017143 Uncharacterised conserved protein UCP037225 VV93_RS02000 840c5c73f728e9ff4ab0a570c7002964 165 Pfam PF11736 Protein of unknown function (DUF3299) 29 162 4.3E-45 T 23-04-2016 IPR021727 Protein of unknown function DUF3299 VV93_RS09110 0572a186b69ddd2b07bbbfb1cb4b8f4e 311 PANTHER PTHR30024 16 306 1.3E-38 T 23-04-2016 VV93_RS09110 0572a186b69ddd2b07bbbfb1cb4b8f4e 311 Gene3D G3DSA:3.40.190.10 103 188 3.7E-14 T 23-04-2016 VV93_RS09110 0572a186b69ddd2b07bbbfb1cb4b8f4e 311 PANTHER PTHR30024:SF1 16 306 1.3E-38 T 23-04-2016 VV93_RS09110 0572a186b69ddd2b07bbbfb1cb4b8f4e 311 SUPERFAMILY SSF53850 20 245 3.21E-27 T 23-04-2016 VV93_RS09110 0572a186b69ddd2b07bbbfb1cb4b8f4e 311 Pfam PF09084 NMT1/THI5 like 31 239 1.2E-18 T 23-04-2016 IPR015168 SsuA/THI5-like VV93_RS10050 cc1624df6a854e4d78b57c4632397526 355 SUPERFAMILY SSF74653 265 355 2.16E-15 T 23-04-2016 VV93_RS10050 cc1624df6a854e4d78b57c4632397526 355 Pfam PF06519 TolA C-terminal 254 352 7.5E-29 T 23-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 VV93_RS10050 cc1624df6a854e4d78b57c4632397526 355 Gene3D G3DSA:3.30.1150.10 253 353 2.3E-22 T 23-04-2016 VV93_RS10050 cc1624df6a854e4d78b57c4632397526 355 TIGRFAM TIGR02794 tolA_full: protein TolA 14 354 4.7E-92 T 23-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 VV93_RS13320 af58464f432ab369cfe2299438df9b74 152 Gene3D G3DSA:3.20.140.10 42 124 4.6E-4 T 23-04-2016 VV93_RS11105 f512da6d0229640ccd91772688fb186a 120 Pfam PF11169 Protein of unknown function (DUF2956) 11 117 2.4E-43 T 23-04-2016 IPR021339 Protein of unknown function DUF2956 VV93_RS06010 22aa13ba756ff19bc80c11cf3b8fe4e5 213 Gene3D G3DSA:1.25.40.10 120 207 3.6E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS06010 22aa13ba756ff19bc80c11cf3b8fe4e5 213 SUPERFAMILY SSF48452 75 188 1.17E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS06010 22aa13ba756ff19bc80c11cf3b8fe4e5 213 Gene3D G3DSA:1.25.40.10 79 116 7.3E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VV93_RS04675 57ee087366451818aeb5461e8e4522c7 449 Gene3D G3DSA:2.40.160.10 43 448 5.3E-36 T 23-04-2016 IPR023614 Porin domain VV93_RS22165 41216137834270072efe137c437eafbf 154 PANTHER PTHR30026 1 154 5.0E-30 T 23-04-2016 VV93_RS22165 41216137834270072efe137c437eafbf 154 Pfam PF02321 Outer membrane efflux protein 2 111 7.9E-11 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VV93_RS22165 41216137834270072efe137c437eafbf 154 PANTHER PTHR30026:SF4 1 154 5.0E-30 T 23-04-2016 VV93_RS22165 41216137834270072efe137c437eafbf 154 SUPERFAMILY SSF56954 1 153 7.59E-29 T 23-04-2016 VV93_RS22165 41216137834270072efe137c437eafbf 154 Gene3D G3DSA:1.20.1600.10 6 151 1.9E-19 T 23-04-2016 VV93_RS10515 91523d6fb8cb00a59ab2ca51572ec2c8 196 PANTHER PTHR40593 1 196 1.9E-95 T 23-04-2016 VV93_RS10515 91523d6fb8cb00a59ab2ca51572ec2c8 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 6 187 2.9E-74 T 23-04-2016 IPR014094 Penicillin-binding protein activator LpoB VV93_RS10515 91523d6fb8cb00a59ab2ca51572ec2c8 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 9 185 2.5E-65 T 23-04-2016 IPR014094 Penicillin-binding protein activator LpoB VV93_RS10945 74d7f0e26472f701a91e2d0424972d0e 122 PANTHER PTHR26402 1 121 1.7E-42 T 23-04-2016 VV93_RS10945 74d7f0e26472f701a91e2d0424972d0e 122 Pfam PF00072 Response regulator receiver domain 3 115 1.5E-32 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS10945 74d7f0e26472f701a91e2d0424972d0e 122 SMART SM00448 1 115 6.5E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VV93_RS10945 74d7f0e26472f701a91e2d0424972d0e 122 SUPERFAMILY SSF52172 1 120 3.56E-37 T 23-04-2016 IPR011006 CheY-like superfamily VV93_RS10945 74d7f0e26472f701a91e2d0424972d0e 122 Gene3D G3DSA:3.40.50.2300 1 121 1.2E-38 T 23-04-2016 VV93_RS07865 e0f8a04190fbdb209be3195fba3c3557 372 Pfam PF05144 Phage replication protein CRI 54 241 9.8E-8 T 23-04-2016 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 VV93_RS07865 e0f8a04190fbdb209be3195fba3c3557 372 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 55 359 8.1E-11 T 23-04-2016 IPR006516 Replication-associated protein G2P GO:0006260 VV93_RS07865 e0f8a04190fbdb209be3195fba3c3557 372 Pfam PF05155 Phage X family 276 359 1.4E-23 T 23-04-2016 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 VV93_RS02185 de735ea7ce959ad09184ea8a1e11025a 262 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 7 260 9.6E-98 T 23-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria VV93_RS02185 de735ea7ce959ad09184ea8a1e11025a 262 PANTHER PTHR30188:SF4 3 262 7.4E-123 T 23-04-2016 VV93_RS02185 de735ea7ce959ad09184ea8a1e11025a 262 Pfam PF02405 Permease MlaE 47 258 2.9E-75 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 VV93_RS02185 de735ea7ce959ad09184ea8a1e11025a 262 PANTHER PTHR30188 3 262 7.4E-123 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 VV93_RS08860 a80b632438bb64721ce7338f8f2c714e 1285 Pfam PF16313 Met-zincin 564 786 1.9E-6 T 23-04-2016 IPR032534 Domian of unknown function DUF4953 VV93_RS08860 a80b632438bb64721ce7338f8f2c714e 1285 Gene3D G3DSA:3.40.390.10 551 641 1.0E-7 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 VV93_RS08860 a80b632438bb64721ce7338f8f2c714e 1285 SUPERFAMILY SSF55486 566 647 5.87E-16 T 23-04-2016 VV93_RS08860 a80b632438bb64721ce7338f8f2c714e 1285 SUPERFAMILY SSF55486 275 386 5.87E-16 T 23-04-2016 VV93_RS15090 3860fb30f5617094fc18cb8aff2a13d8 481 Pfam PF02386 Cation transport protein 60 475 5.8E-51 T 23-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VV93_RS15090 3860fb30f5617094fc18cb8aff2a13d8 481 PANTHER PTHR32024 1 481 1.5E-301 T 23-04-2016 VV93_RS15090 3860fb30f5617094fc18cb8aff2a13d8 481 PANTHER PTHR32024:SF3 1 481 1.5E-301 T 23-04-2016 VV93_RS15090 3860fb30f5617094fc18cb8aff2a13d8 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 1.3E-115 T 23-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VV93_RS15090 3860fb30f5617094fc18cb8aff2a13d8 481 PIRSF PIRSF006247 1 481 1.7E-165 T 23-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VV93_RS06435 d2984bcbfb3ba2c276de346b220b618f 177 Pfam PF12915 Protein of unknown function (DUF3833) 17 176 2.8E-66 T 23-04-2016 IPR024409 Protein of unknown function DUF3833 VV93_RS10590 77932c6577706bb6ae5e7942b081708d 154 Pfam PF11008 Protein of unknown function (DUF2846) 15 126 5.1E-32 T 23-04-2016 IPR022548 Domain of unknown function DUF2846 VV93_RS10590 77932c6577706bb6ae5e7942b081708d 154 PIRSF PIRSF012335 1 154 2.5E-72 T 23-04-2016 IPR016596 Protein of unknown function UCP012335 VV93_RS03020 37d962ad50e7f2862ea18c57b7c15b3a 61 Pfam PF12065 Protein of unknown function (DUF3545) 1 60 2.6E-27 T 23-04-2016 IPR021932 Protein of unknown function DUF3545 VV93_RS05360 3d39c20ceeae61957f7dcb92b035d401 289 SUPERFAMILY SSF54427 168 288 1.75E-15 T 23-04-2016 IPR032710 NTF2-like domain VV93_RS05360 3d39c20ceeae61957f7dcb92b035d401 289 PANTHER PTHR41542:SF1 1 289 2.0E-83 T 23-04-2016 VV93_RS05360 3d39c20ceeae61957f7dcb92b035d401 289 Pfam PF07466 Protein of unknown function (DUF1517) 28 125 1.1E-5 T 23-04-2016 IPR010903 Protein of unknown function DUF1517 VV93_RS05360 3d39c20ceeae61957f7dcb92b035d401 289 PANTHER PTHR41542 1 289 2.0E-83 T 23-04-2016 VV93_RS05360 3d39c20ceeae61957f7dcb92b035d401 289 SMART SM00978 158 289 2.0E-35 T 23-04-2016 IPR007379 Tim44-like domain VV93_RS05360 3d39c20ceeae61957f7dcb92b035d401 289 Pfam PF04280 Tim44-like domain 167 288 2.0E-14 T 23-04-2016 IPR007379 Tim44-like domain VV93_RS02045 11e2141e1466beeb1db7574e3e4583ed 1251 PANTHER PTHR36985 1 1251 4.9E-288 T 23-04-2016 VV93_RS02045 11e2141e1466beeb1db7574e3e4583ed 1251 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 915 1250 7.8E-62 T 23-04-2016 IPR007452 Translocation and assembly module TamB VV93_RS10345 e430df3e15b67ca6666bc47ad8111bcf 929 SMART SM01276 475 799 7.6E-40 T 23-04-2016 IPR031161 Peptidase family M60 domain VV93_RS10345 e430df3e15b67ca6666bc47ad8111bcf 929 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 470 877 2.2E-11 T 23-04-2016 IPR031161 Peptidase family M60 domain VV93_RS21985 85ea11c1c712057b3336c8cc2e4f286c 328 Gene3D G3DSA:1.10.3210.10 124 308 9.7E-19 T 23-04-2016 IPR006674 HD domain VV93_RS21985 85ea11c1c712057b3336c8cc2e4f286c 328 Pfam PF01966 HD domain 135 270 1.9E-16 T 23-04-2016 IPR006674 HD domain VV93_RS21985 85ea11c1c712057b3336c8cc2e4f286c 328 SUPERFAMILY SSF109604 124 311 2.08E-32 T 23-04-2016 VV93_RS21985 85ea11c1c712057b3336c8cc2e4f286c 328 SMART SM00471 129 280 1.4E-10 T 23-04-2016 IPR003607 HD/PDEase domain VV93_RS18455 7a1732d3da6191d05cf9dfcedbddbd59 88 SUPERFAMILY SSF53335 2 80 1.61E-17 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS18455 7a1732d3da6191d05cf9dfcedbddbd59 88 PANTHER PTHR10629 1 83 2.0E-16 T 23-04-2016 VV93_RS18455 7a1732d3da6191d05cf9dfcedbddbd59 88 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 16 30 2.8E-7 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VV93_RS18455 7a1732d3da6191d05cf9dfcedbddbd59 88 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 63 76 2.8E-7 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VV93_RS18455 7a1732d3da6191d05cf9dfcedbddbd59 88 Pfam PF00145 C-5 cytosine-specific DNA methylase 2 80 1.3E-17 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS18455 7a1732d3da6191d05cf9dfcedbddbd59 88 Gene3D G3DSA:3.40.50.150 2 79 5.3E-17 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV93_RS18455 7a1732d3da6191d05cf9dfcedbddbd59 88 PANTHER PTHR10629:SF32 1 83 2.0E-16 T 23-04-2016 VV93_RS14730 1f1148fd4f9a5f1ca9b79336f0eee913 145 Pfam PF13673 Acetyltransferase (GNAT) domain 32 117 4.6E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS14730 1f1148fd4f9a5f1ca9b79336f0eee913 145 Gene3D G3DSA:3.40.630.30 5 119 6.6E-12 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS14730 1f1148fd4f9a5f1ca9b79336f0eee913 145 SUPERFAMILY SSF55729 10 118 3.92E-11 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS11250 b3e3cfe3377c9f9f7f60972682367c1b 432 SUPERFAMILY SSF53167 8 153 2.83E-26 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV93_RS11250 b3e3cfe3377c9f9f7f60972682367c1b 432 SUPERFAMILY SSF53167 238 323 2.83E-26 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV93_RS11250 b3e3cfe3377c9f9f7f60972682367c1b 432 Gene3D G3DSA:3.40.50.1580 8 150 3.6E-38 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV93_RS11250 b3e3cfe3377c9f9f7f60972682367c1b 432 Gene3D G3DSA:3.40.50.1580 235 325 3.6E-38 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV93_RS11250 b3e3cfe3377c9f9f7f60972682367c1b 432 Pfam PF01048 Phosphorylase superfamily 9 323 9.1E-12 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV93_RS06560 030af9c406bcc2a066800e664dc31e58 141 PANTHER PTHR42641:SF2 5 127 1.4E-36 T 23-04-2016 VV93_RS06560 030af9c406bcc2a066800e664dc31e58 141 PANTHER PTHR42641 5 127 1.4E-36 T 23-04-2016 VV93_RS06560 030af9c406bcc2a066800e664dc31e58 141 Pfam PF05232 Chlorhexidine efflux transporter 2 63 8.3E-22 T 23-04-2016 IPR007896 Chlorhexidine efflux transporter VV93_RS06560 030af9c406bcc2a066800e664dc31e58 141 Pfam PF05232 Chlorhexidine efflux transporter 69 131 9.2E-23 T 23-04-2016 IPR007896 Chlorhexidine efflux transporter VV93_RS05520 5c482ff75f8b0116fe940d94644b8139 312 PANTHER PTHR10625:SF131 2 293 1.2E-115 T 23-04-2016 VV93_RS05520 5c482ff75f8b0116fe940d94644b8139 312 Gene3D G3DSA:3.40.800.20 3 289 5.6E-60 T 23-04-2016 IPR023801 Histone deacetylase domain VV93_RS05520 5c482ff75f8b0116fe940d94644b8139 312 Pfam PF00850 Histone deacetylase domain 44 289 7.0E-46 T 23-04-2016 IPR023801 Histone deacetylase domain VV93_RS05520 5c482ff75f8b0116fe940d94644b8139 312 PRINTS PR01270 Histone deacetylase superfamily signature 232 242 4.7E-16 T 23-04-2016 IPR000286 Histone deacetylase superfamily VV93_RS05520 5c482ff75f8b0116fe940d94644b8139 312 PRINTS PR01270 Histone deacetylase superfamily signature 158 173 4.7E-16 T 23-04-2016 IPR000286 Histone deacetylase superfamily VV93_RS05520 5c482ff75f8b0116fe940d94644b8139 312 PRINTS PR01270 Histone deacetylase superfamily signature 124 147 4.7E-16 T 23-04-2016 IPR000286 Histone deacetylase superfamily VV93_RS05520 5c482ff75f8b0116fe940d94644b8139 312 PANTHER PTHR10625 2 293 1.2E-115 T 23-04-2016 IPR000286 Histone deacetylase superfamily VV93_RS05520 5c482ff75f8b0116fe940d94644b8139 312 SUPERFAMILY SSF52768 2 297 1.68E-78 T 23-04-2016 VV93_RS11660 a2735417f4fa18fd730fd2bed76200ac 189 Pfam PF03923 Uncharacterized lipoprotein 28 186 4.3E-51 T 23-04-2016 IPR005619 Uncharacterised protein family, YajG VV93_RS11005 e85f880b046b9a7ebf1428064f2e314c 165 Pfam PF03748 Flagellar basal body-associated protein FliL 64 165 3.9E-21 T 23-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VV93_RS11005 e85f880b046b9a7ebf1428064f2e314c 165 PANTHER PTHR35091:SF1 1 165 5.9E-63 T 23-04-2016 VV93_RS11005 e85f880b046b9a7ebf1428064f2e314c 165 PANTHER PTHR35091 1 165 5.9E-63 T 23-04-2016 VV93_RS09775 ecf53250e1882853175b60d7f92991c4 172 Gene3D G3DSA:3.40.630.30 20 160 2.6E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS09775 ecf53250e1882853175b60d7f92991c4 172 Pfam PF13302 Acetyltransferase (GNAT) domain 57 148 1.2E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 VV93_RS09775 ecf53250e1882853175b60d7f92991c4 172 PANTHER PTHR39173 1 172 4.7E-35 T 23-04-2016 VV93_RS09775 ecf53250e1882853175b60d7f92991c4 172 SUPERFAMILY SSF55729 16 162 1.95E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS08695 7ff6f6ad7a06c73c95a80d9878fd011b 247 Pfam PF07070 SpoOM protein 2 215 1.6E-60 T 23-04-2016 IPR009776 Sporulation stage 0, protein M VV93_RS08695 7ff6f6ad7a06c73c95a80d9878fd011b 247 PANTHER PTHR40053 1 214 8.3E-47 T 23-04-2016 VV93_RS08930 ec21e42d5f4b14ffe2af43467e89294c 153 Pfam PF02566 OsmC-like protein 55 152 6.1E-16 T 23-04-2016 IPR003718 OsmC/Ohr family VV93_RS08930 ec21e42d5f4b14ffe2af43467e89294c 153 Gene3D G3DSA:3.30.300.20 1 152 4.3E-59 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta VV93_RS08930 ec21e42d5f4b14ffe2af43467e89294c 153 SUPERFAMILY SSF82784 1 152 3.8E-50 T 23-04-2016 IPR003718 OsmC/Ohr family VV93_RS15345 6a7099a13e59205084d37cce09987c09 111 Gene3D G3DSA:1.10.10.10 40 100 3.6E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS15345 6a7099a13e59205084d37cce09987c09 111 Pfam PF12728 Helix-turn-helix domain 41 90 2.0E-11 T 23-04-2016 VV93_RS15345 6a7099a13e59205084d37cce09987c09 111 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 41 87 4.3E-11 T 23-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 VV93_RS15345 6a7099a13e59205084d37cce09987c09 111 SUPERFAMILY SSF46955 40 94 1.35E-6 T 23-04-2016 IPR009061 Putative DNA-binding domain VV93_RS05460 1e62ce32a340eeebe7257de91b650793 562 Pfam PF16130 Domain of unknown function (DUF4842) 348 550 6.1E-48 T 23-04-2016 IPR032295 Domain of unknown function DUF4842 VV93_RS05460 1e62ce32a340eeebe7257de91b650793 562 TIGRFAM TIGR04456 LruC_dom: LruC domain 315 551 2.8E-69 T 23-04-2016 IPR031025 LruC domain VV93_RS15340 268db3d886ec8be11a60505837fc98c2 557 Pfam PF06048 Domain of unknown function (DUF927) 21 277 1.6E-63 T 23-04-2016 IPR009270 Domain of unknown function DUF927 VV93_RS03600 7cbb306a1615624d1cc5507f609234d7 374 PANTHER PTHR30544:SF5 1 374 3.6E-194 T 23-04-2016 VV93_RS03600 7cbb306a1615624d1cc5507f609234d7 374 SUPERFAMILY SSF102114 105 332 1.7E-12 T 23-04-2016 VV93_RS03600 7cbb306a1615624d1cc5507f609234d7 374 Pfam PF04055 Radical SAM superfamily 109 280 7.7E-14 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VV93_RS03600 7cbb306a1615624d1cc5507f609234d7 374 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 359 7.7E-161 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS03600 7cbb306a1615624d1cc5507f609234d7 374 PIRSF PIRSF006004 3 366 3.3E-144 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS03600 7cbb306a1615624d1cc5507f609234d7 374 PANTHER PTHR30544 1 374 3.6E-194 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS03600 7cbb306a1615624d1cc5507f609234d7 374 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 72.355 T 23-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VV93_RS03600 7cbb306a1615624d1cc5507f609234d7 374 Gene3D G3DSA:3.20.20.70 106 329 4.8E-15 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VV93_RS07540 89299abc803a25150465c3bd8895b0a3 395 SUPERFAMILY SSF46894 323 387 3.37E-13 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV93_RS07540 89299abc803a25150465c3bd8895b0a3 395 SMART SM00421 330 387 6.3E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS07540 89299abc803a25150465c3bd8895b0a3 395 Gene3D G3DSA:1.10.10.10 328 388 7.3E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VV93_RS07540 89299abc803a25150465c3bd8895b0a3 395 Pfam PF00196 Bacterial regulatory proteins, luxR family 333 384 3.9E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV93_RS02910 d0f15d44ccdca2d72ceb6f2def844bb9 317 Pfam PF03186 CobD/Cbib protein 18 290 7.2E-39 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 VV93_RS02910 d0f15d44ccdca2d72ceb6f2def844bb9 317 PANTHER PTHR34308 4 314 2.6E-75 T 23-04-2016 VV93_RS02910 d0f15d44ccdca2d72ceb6f2def844bb9 317 PANTHER PTHR34308:SF1 4 314 2.6E-75 T 23-04-2016 VV93_RS13295 d684f66621ed52731f272c7790c5cbe6 951 SUPERFAMILY SSF56672 407 638 1.58E-15 T 23-04-2016 VV93_RS13295 d684f66621ed52731f272c7790c5cbe6 951 Pfam PF03175 DNA polymerase type B, organellar and viral 407 574 6.9E-8 T 23-04-2016 IPR004868 DNA-directed DNA polymerase, family B, mitochondria/virus GO:0000166|GO:0003677|GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS11765 5fabc326298c743ea546cb8d8a9b64d5 325 Pfam PF03595 Voltage-dependent anion channel 19 306 9.5E-31 T 23-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VV93_RS11765 5fabc326298c743ea546cb8d8a9b64d5 325 PANTHER PTHR37955:SF1 1 313 1.2E-93 T 23-04-2016 VV93_RS11765 5fabc326298c743ea546cb8d8a9b64d5 325 PANTHER PTHR37955 1 313 1.2E-93 T 23-04-2016 VV93_RS09170 291b9f0ee924ea32441738297fa6df92 390 PANTHER PTHR32309 32 390 1.0E-31 T 23-04-2016 VV93_RS09170 291b9f0ee924ea32441738297fa6df92 390 Pfam PF02706 Chain length determinant protein 14 178 1.5E-15 T 23-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 VV93_RS09170 291b9f0ee924ea32441738297fa6df92 390 PANTHER PTHR32309:SF13 32 390 1.0E-31 T 23-04-2016 VV93_RS01510 1a8309811bc1edf667ca9d3686901bc9 236 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 232 2.4E-79 T 23-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 VV93_RS01510 1a8309811bc1edf667ca9d3686901bc9 236 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 234 44.54 T 23-04-2016 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676|UniPathway: UPA00958 VV93_RS01510 1a8309811bc1edf667ca9d3686901bc9 236 SUPERFAMILY SSF56112 44 195 4.99E-20 T 23-04-2016 IPR011009 Protein kinase-like domain VV93_RS01510 1a8309811bc1edf667ca9d3686901bc9 236 Gene3D G3DSA:1.10.510.10 145 224 4.9E-15 T 23-04-2016 VV93_RS07845 0dbd24de69ed51ed5c83374201c03560 103 Pfam PF12321 Protein of unknown function (DUF3634) 2 100 1.4E-39 T 23-04-2016 IPR022090 Protein of unknown function DUF3634 VV93_RS07920 5e9c005dc2baa335e1b72bdf5a8800ea 114 Pfam PF10734 Protein of unknown function (DUF2523) 33 110 3.3E-6 T 23-04-2016 IPR019670 Protein of unkown function DUF2523 VV93_RS06195 1bb6ca982a5d71a60b58180927892488 197 SUPERFAMILY SSF56925 20 197 5.76E-17 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VV93_RS06195 1bb6ca982a5d71a60b58180927892488 197 Gene3D G3DSA:2.40.160.20 29 197 4.5E-16 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VV93_RS00420 e28b9e8347146e60fed1caedf10789d3 844 PANTHER PTHR38760 2 831 0.0 T 23-04-2016 VV93_RS00420 e28b9e8347146e60fed1caedf10789d3 844 PIRSF PIRSF001444 1 844 0.0 T 23-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VV93_RS00420 e28b9e8347146e60fed1caedf10789d3 844 Pfam PF01295 Adenylate cyclase, class-I 226 829 1.7E-255 T 23-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VV93_RS00420 e28b9e8347146e60fed1caedf10789d3 844 Pfam PF12633 Adenylate cyclase NT domain 5 198 4.0E-76 T 23-04-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 VV93_RS10060 5fb09de38cb920460d9d5accf6527531 227 PANTHER PTHR30625:SF3 3 223 3.3E-76 T 23-04-2016 VV93_RS10060 5fb09de38cb920460d9d5accf6527531 227 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 5.1E-93 T 23-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 VV93_RS10060 5fb09de38cb920460d9d5accf6527531 227 PANTHER PTHR30625 3 223 3.3E-76 T 23-04-2016 VV93_RS10060 5fb09de38cb920460d9d5accf6527531 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 207 2.5E-42 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VV93_RS15055 11f88e2d88c719941d36f082d02fd4d0 159 Pfam PF04361 Protein of unknown function (DUF494) 2 159 2.9E-58 T 23-04-2016 IPR007456 Smg VV93_RS15055 11f88e2d88c719941d36f082d02fd4d0 159 PANTHER PTHR38692 1 159 2.5E-78 T 23-04-2016 VV93_RS15055 11f88e2d88c719941d36f082d02fd4d0 159 Hamap MF_00598 Protein Smg [smg]. 2 159 32.651 T 23-04-2016 IPR007456 Smg VV93_RS15055 11f88e2d88c719941d36f082d02fd4d0 159 PANTHER PTHR38692:SF1 1 159 2.5E-78 T 23-04-2016 VV93_RS02465 7d82ce4a5807ebfc42b2da382b0f3f8a 420 TIGRFAM TIGR02564 cas_Csy1: CRISPR type I-F/YPEST-associated protein Csy1 42 369 1.4E-51 T 23-04-2016 IPR013397 CRISPR-associated protein Csy1 VV93_RS02465 7d82ce4a5807ebfc42b2da382b0f3f8a 420 Pfam PF09611 CRISPR-associated protein (Cas_Csy1) 42 405 1.4E-106 T 23-04-2016 IPR013397 CRISPR-associated protein Csy1 VV93_RS08320 12f00b50801fd97f39c8c3d8cc764a30 89 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 10 89 7.0E-36 T 23-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 VV93_RS08320 12f00b50801fd97f39c8c3d8cc764a30 89 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 10 89 6.3E-43 T 23-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 VV93_RS08320 12f00b50801fd97f39c8c3d8cc764a30 89 PANTHER PTHR38039 6 89 2.3E-32 T 23-04-2016 VV93_RS08320 12f00b50801fd97f39c8c3d8cc764a30 89 SUPERFAMILY SSF143011 8 88 5.89E-28 T 23-04-2016 VV93_RS08320 12f00b50801fd97f39c8c3d8cc764a30 89 PANTHER PTHR38039:SF1 6 89 2.3E-32 T 23-04-2016 VV93_RS08225 c0c52ef28949a532221f00a16cdf293c 155 Gene3D G3DSA:3.90.1720.10 39 154 3.1E-37 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VV93_RS08225 c0c52ef28949a532221f00a16cdf293c 155 PANTHER PTHR21666 45 153 4.9E-28 T 23-04-2016 VV93_RS08225 c0c52ef28949a532221f00a16cdf293c 155 Pfam PF00877 NlpC/P60 family 48 152 2.5E-27 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VV93_RS08225 c0c52ef28949a532221f00a16cdf293c 155 SUPERFAMILY SSF54001 38 153 4.66E-37 T 23-04-2016 VV93_RS23030 59ecefe5c6331b0b6306ca06f1af6c67 89 PANTHER PTHR30050 1 63 2.7E-15 T 23-04-2016 VV93_RS23030 59ecefe5c6331b0b6306ca06f1af6c67 89 PANTHER PTHR30050:SF2 1 63 2.7E-15 T 23-04-2016 VV93_RS23030 59ecefe5c6331b0b6306ca06f1af6c67 89 Pfam PF11638 DnaA N-terminal domain 2 56 4.5E-17 T 23-04-2016 IPR024633 DnaA N-terminal domain VV93_RS02430 8943d2a3ff956ba5a45bc71c89c67162 360 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 325 6.3E-74 T 23-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 VV93_RS02430 8943d2a3ff956ba5a45bc71c89c67162 360 PIRSF PIRSF039026 5 360 1.6E-133 T 23-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VV93_RS02430 8943d2a3ff956ba5a45bc71c89c67162 360 PANTHER PTHR33376 4 345 6.1E-157 T 23-04-2016 VV93_RS02430 8943d2a3ff956ba5a45bc71c89c67162 360 PANTHER PTHR33376:SF5 4 345 6.1E-157 T 23-04-2016 VV93_RS06225 dda797c5b4732e409c367439dfcb8526 465 PANTHER PTHR35369 3 465 1.4E-57 T 23-04-2016 VV93_RS06225 dda797c5b4732e409c367439dfcb8526 465 Pfam PF00817 impB/mucB/samB family 16 146 6.0E-7 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV93_RS06225 dda797c5b4732e409c367439dfcb8526 465 PANTHER PTHR35369:SF2 3 465 1.4E-57 T 23-04-2016 VV93_RS06225 dda797c5b4732e409c367439dfcb8526 465 SUPERFAMILY SSF56672 20 223 1.2E-26 T 23-04-2016 VV93_RS08990 c86c57ecb6ea3719b8bfa17b2f733375 294 Pfam PF00482 Type II secretion system (T2SS), protein F 127 252 6.8E-18 T 23-04-2016 IPR018076 Type II secretion system F domain VV93_RS08990 c86c57ecb6ea3719b8bfa17b2f733375 294 PANTHER PTHR35007 92 294 1.2E-36 T 23-04-2016 VV93_RS08990 c86c57ecb6ea3719b8bfa17b2f733375 294 PANTHER PTHR35007:SF1 92 294 1.2E-36 T 23-04-2016 VV93_RS11550 af51a414e0c1bcbe50dca873db9aa368 231 Gene3D G3DSA:2.40.30.70 3 156 6.6E-51 T 23-04-2016 IPR023370 TsaA-like domain VV93_RS11550 af51a414e0c1bcbe50dca873db9aa368 231 PANTHER PTHR12818:SF6 1 229 1.5E-115 T 23-04-2016 VV93_RS11550 af51a414e0c1bcbe50dca873db9aa368 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 23-04-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site VV93_RS11550 af51a414e0c1bcbe50dca873db9aa368 231 SUPERFAMILY SSF118196 2 225 8.37E-78 T 23-04-2016 IPR023370 TsaA-like domain VV93_RS11550 af51a414e0c1bcbe50dca873db9aa368 231 PANTHER PTHR12818 1 229 1.5E-115 T 23-04-2016 VV93_RS11550 af51a414e0c1bcbe50dca873db9aa368 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 1.9E-40 T 23-04-2016 IPR023370 TsaA-like domain VV93_RS11550 af51a414e0c1bcbe50dca873db9aa368 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 3 145 1.9E-46 T 23-04-2016 IPR023370 TsaA-like domain VV93_RS03015 35f6e46c2274c71581ec6b778f1c0070 183 Gene3D G3DSA:1.20.120.520 2 149 1.6E-17 T 23-04-2016 VV93_RS03015 35f6e46c2274c71581ec6b778f1c0070 183 Pfam PF01814 Hemerythrin HHE cation binding domain 2 135 2.0E-13 T 23-04-2016 IPR012312 Haemerythrin-like VV93_RS06430 ddab7ee4f70ca17d337dc8c8cbd3a23e 187 Pfam PF16036 Chalcone isomerase-like 49 184 9.1E-8 T 23-04-2016 IPR016087 Chalcone isomerase GO:0016872 VV93_RS03115 0d65caba76dfa452a44901dd49f2dc2a 263 PANTHER PTHR30269 1 263 7.3E-110 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VV93_RS03115 0d65caba76dfa452a44901dd49f2dc2a 263 Pfam PF01925 Sulfite exporter TauE/SafE 10 261 1.3E-50 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VV93_RS03115 0d65caba76dfa452a44901dd49f2dc2a 263 PANTHER PTHR30269:SF18 1 263 7.3E-110 T 23-04-2016 VV93_RS00990 2f37d8cf9c16cee1a5805723ef8cdc89 178 Pfam PF13511 Domain of unknown function (DUF4124) 9 57 8.1E-11 T 23-04-2016 IPR025392 Domain of unknown function DUF4124 VV93_RS12070 ac5cae35a8edd72503f87125950894c5 782 SUPERFAMILY SSF141371 466 548 1.75E-5 T 23-04-2016 VV93_RS12070 ac5cae35a8edd72503f87125950894c5 782 Pfam PF07238 PilZ domain 470 557 4.1E-10 T 23-04-2016 IPR009875 PilZ domain GO:0035438 VV93_RS12070 ac5cae35a8edd72503f87125950894c5 782 Pfam PF07238 PilZ domain 145 233 1.5E-8 T 23-04-2016 IPR009875 PilZ domain GO:0035438 VV93_RS12070 ac5cae35a8edd72503f87125950894c5 782 SUPERFAMILY SSF141371 142 200 8.44E-5 T 23-04-2016 VV93_RS08975 45fa5db6a8ee32aa8883c1668f487b39 155 Pfam PF07811 TadE-like protein 9 49 1.4E-10 T 23-04-2016 IPR012495 TadE-like VV93_RS11560 49b8c31f6e312422fe82829270ab887b 222 Gene3D G3DSA:1.10.3680.10 80 221 1.1E-28 T 23-04-2016 IPR029024 TerB-like VV93_RS11560 49b8c31f6e312422fe82829270ab887b 222 SUPERFAMILY SSF158682 81 221 1.44E-27 T 23-04-2016 IPR029024 TerB-like VV93_RS11560 49b8c31f6e312422fe82829270ab887b 222 Pfam PF04391 Protein of unknown function (DUF533) 43 221 3.1E-61 T 23-04-2016 IPR007486 Inner membrane protein YebE VV93_RS10800 304adbe5df022749a3ebe909cff4899d 207 PANTHER PTHR30506:SF2 1 207 2.7E-120 T 23-04-2016 VV93_RS10800 304adbe5df022749a3ebe909cff4899d 207 PANTHER PTHR30506 1 207 2.7E-120 T 23-04-2016 VV93_RS10800 304adbe5df022749a3ebe909cff4899d 207 Pfam PF03458 UPF0126 domain 5 76 9.6E-19 T 23-04-2016 IPR005115 Uncharacterised domain UPF0126 VV93_RS10800 304adbe5df022749a3ebe909cff4899d 207 Pfam PF03458 UPF0126 domain 92 163 9.4E-20 T 23-04-2016 IPR005115 Uncharacterised domain UPF0126 VV93_RS00535 06f5819a3738cbc46e8d2a126e5333f7 206 Pfam PF07947 YhhN-like protein 26 204 3.2E-34 T 23-04-2016 IPR012506 YhhN-like GO:0016021 VV93_RS04285 f3ebf12ed6738097df6cd4824bf4559d 156 Pfam PF07295 Zinc-ribbon containing domain 14 152 4.1E-47 T 23-04-2016 IPR009912 Zinc-ribbon containing domain VV93_RS09785 b33672d2b00a961c356510f1cbd9e54f 107 Gene3D G3DSA:1.10.260.40 9 68 8.0E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS09785 b33672d2b00a961c356510f1cbd9e54f 107 Pfam PF01381 Helix-turn-helix 17 62 1.2E-7 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV93_RS09785 b33672d2b00a961c356510f1cbd9e54f 107 SMART SM00530 16 69 3.0E-7 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV93_RS09785 b33672d2b00a961c356510f1cbd9e54f 107 SUPERFAMILY SSF47413 11 71 8.85E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VV93_RS09920 d608485c3c89c034fd6c05072346eebc 147 PANTHER PTHR38978 2 147 4.4E-62 T 23-04-2016 VV93_RS09920 d608485c3c89c034fd6c05072346eebc 147 Pfam PF10980 Protein of unknown function (DUF2787) 15 144 7.3E-48 T 23-04-2016 IPR021248 Protein of unknown function DUF2787 VV93_RS09920 d608485c3c89c034fd6c05072346eebc 147 PANTHER PTHR38978:SF2 2 147 4.4E-62 T 23-04-2016 VV93_RS09950 ffbf98c3cae7c46da638f94c59843726 212 Pfam PF11726 Protein of unknown function (DUF3296) 33 210 4.2E-67 T 23-04-2016 IPR021723 Inovirus Gp2 VV93_RS10085 fc5c73e71a2f45f880a326d883730dcf 528 PANTHER PTHR30365 1 310 7.8E-276 T 23-04-2016 VV93_RS10085 fc5c73e71a2f45f880a326d883730dcf 528 PANTHER PTHR30365 376 520 7.8E-276 T 23-04-2016 VV93_RS10085 fc5c73e71a2f45f880a326d883730dcf 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.3E-177 T 23-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 VV93_RS10085 fc5c73e71a2f45f880a326d883730dcf 528 PANTHER PTHR30365:SF0 1 310 7.8E-276 T 23-04-2016 VV93_RS10085 fc5c73e71a2f45f880a326d883730dcf 528 PANTHER PTHR30365:SF0 376 520 7.8E-276 T 23-04-2016 VV93_RS04565 e604e3563d82ea92be427f3806a1352a 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 2.6E-28 T 23-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VV93_RS04565 e604e3563d82ea92be427f3806a1352a 131 PIRSF PIRSF002889 1 131 1.9E-32 T 23-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VV93_RS04565 e604e3563d82ea92be427f3806a1352a 131 PANTHER PTHR30435:SF12 3 131 4.8E-43 T 23-04-2016 VV93_RS04565 e604e3563d82ea92be427f3806a1352a 131 PANTHER PTHR30435 3 131 4.8E-43 T 23-04-2016 VV93_RS21840 b2729612fb6a421aea84ef5d3515b19c 131 SUPERFAMILY SSF55486 3 130 2.44E-8 T 23-04-2016 VV93_RS00600 15543f6bbf3a2a13b0cc3f0fdd26dbe2 284 Pfam PF01040 UbiA prenyltransferase family 24 266 2.4E-69 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 VV93_RS00600 15543f6bbf3a2a13b0cc3f0fdd26dbe2 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 3.8E-107 T 23-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 VV93_RS00600 15543f6bbf3a2a13b0cc3f0fdd26dbe2 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.45 T 23-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 VV93_RS00600 15543f6bbf3a2a13b0cc3f0fdd26dbe2 284 PANTHER PTHR11048 1 281 1.6E-91 T 23-04-2016 VV93_RS14365 c613880a6c10571d7608cda9bb4d56dc 122 Pfam PF04892 VanZ like family 31 106 2.5E-10 T 23-04-2016 IPR006976 VanZ-like VV93_RS19720 fdccd1e590dae05a7b656b4ecd4be32a 225 Pfam PF02378 Phosphotransferase system, EIIC 4 189 1.1E-30 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VV93_RS19720 fdccd1e590dae05a7b656b4ecd4be32a 225 PANTHER PTHR30009:SF4 101 225 1.3E-92 T 23-04-2016 VV93_RS19720 fdccd1e590dae05a7b656b4ecd4be32a 225 PANTHER PTHR30009:SF4 1 85 1.3E-92 T 23-04-2016 VV93_RS19720 fdccd1e590dae05a7b656b4ecd4be32a 225 PANTHER PTHR30009 1 85 1.3E-92 T 23-04-2016 VV93_RS19720 fdccd1e590dae05a7b656b4ecd4be32a 225 PANTHER PTHR30009 101 225 1.3E-92 T 23-04-2016 VV93_RS09180 604fab77bfbbba2423f5623201447f5b 432 Gene3D G3DSA:2.40.160.20 328 403 2.2E-4 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VV93_RS05760 7732bd6a42566815ffef15124fb5244f 151 Gene3D G3DSA:3.90.1170.40 4 149 1.5E-59 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VV93_RS05760 7732bd6a42566815ffef15124fb5244f 151 Pfam PF02391 MoaE protein 8 120 1.4E-38 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VV93_RS05760 7732bd6a42566815ffef15124fb5244f 151 PANTHER PTHR23404 2 151 5.4E-47 T 23-04-2016 VV93_RS05760 7732bd6a42566815ffef15124fb5244f 151 SUPERFAMILY SSF54690 4 149 1.83E-57 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VV93_RS05760 7732bd6a42566815ffef15124fb5244f 151 PANTHER PTHR23404:SF2 2 151 5.4E-47 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VV93_RS08905 2e90c1aa98613984bd02e32a857d4f4e 387 SUPERFAMILY SSF56935 326 387 6.6E-28 T 23-04-2016 VV93_RS08905 2e90c1aa98613984bd02e32a857d4f4e 387 SUPERFAMILY SSF56935 24 299 6.6E-28 T 23-04-2016 VV93_RS08905 2e90c1aa98613984bd02e32a857d4f4e 387 Gene3D G3DSA:2.40.160.10 182 355 1.5E-4 T 23-04-2016 IPR023614 Porin domain VV93_RS10965 b629e1ae1c1ee0dd9721faff3eda80cb 700 Pfam PF00771 FHIPEP family 34 690 1.5E-268 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VV93_RS10965 b629e1ae1c1ee0dd9721faff3eda80cb 700 PANTHER PTHR30161 6 700 0.0 T 23-04-2016 VV93_RS10965 b629e1ae1c1ee0dd9721faff3eda80cb 700 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 24 697 7.8E-264 T 23-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 VV93_RS10965 b629e1ae1c1ee0dd9721faff3eda80cb 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 244 258 1.8E-56 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VV93_RS10965 b629e1ae1c1ee0dd9721faff3eda80cb 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 40 53 1.8E-56 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VV93_RS10965 b629e1ae1c1ee0dd9721faff3eda80cb 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 193 210 1.8E-56 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VV93_RS10965 b629e1ae1c1ee0dd9721faff3eda80cb 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 77 96 1.8E-56 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VV93_RS10965 b629e1ae1c1ee0dd9721faff3eda80cb 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 144 160 1.8E-56 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VV93_RS10965 b629e1ae1c1ee0dd9721faff3eda80cb 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 163 181 1.8E-56 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VV93_RS10965 b629e1ae1c1ee0dd9721faff3eda80cb 700 PIRSF PIRSF005419 11 700 2.3E-251 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VV93_RS10965 b629e1ae1c1ee0dd9721faff3eda80cb 700 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 149 172 - T 23-04-2016 IPR025505 FHIPEP conserved site VV93_RS10965 b629e1ae1c1ee0dd9721faff3eda80cb 700 PANTHER PTHR30161:SF1 6 700 0.0 T 23-04-2016 VV93_RS14845 339d3021cc43e9b6ba5a8d4829429c85 104 Pfam PF12305 Protein of unknown function (DUF3630) 8 100 9.6E-38 T 23-04-2016 IPR022080 Protein of unknown function DUF3630 VV93_RS07055 550914d71d9ecb62d42cf80c0b9b6661 225 Pfam PF04172 LrgB-like family 6 218 1.2E-71 T 23-04-2016 IPR007300 CidB/LrgB family VV93_RS07055 550914d71d9ecb62d42cf80c0b9b6661 225 PANTHER PTHR30249 1 219 1.2E-90 T 23-04-2016 VV93_RS07055 550914d71d9ecb62d42cf80c0b9b6661 225 PANTHER PTHR30249:SF5 1 219 1.2E-90 T 23-04-2016 VV93_RS06550 b59f83d641b4431a597f20dd3204d375 276 PANTHER PTHR10366 3 242 6.9E-22 T 23-04-2016 VV93_RS06550 b59f83d641b4431a597f20dd3204d375 276 SUPERFAMILY SSF51735 1 247 1.1E-23 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS06550 b59f83d641b4431a597f20dd3204d375 276 Gene3D G3DSA:3.40.50.720 1 225 2.6E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS06550 b59f83d641b4431a597f20dd3204d375 276 PANTHER PTHR10366:SF289 3 242 6.9E-22 T 23-04-2016 VV93_RS06550 b59f83d641b4431a597f20dd3204d375 276 Pfam PF13460 NAD(P)H-binding 9 183 2.3E-12 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS05730 8d3c483e0430782943609ee67af874b7 115 Gene3D G3DSA:1.20.120.160 2 110 1.2E-25 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS05730 8d3c483e0430782943609ee67af874b7 115 SUPERFAMILY SSF47226 2 107 6.15E-22 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS05730 8d3c483e0430782943609ee67af874b7 115 Pfam PF01627 Hpt domain 24 102 1.0E-11 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VV93_RS12645 2be3cd98c4d5de0b7595727054f0e0ea 153 PANTHER PTHR30353:SF12 20 152 1.0E-45 T 23-04-2016 VV93_RS12645 2be3cd98c4d5de0b7595727054f0e0ea 153 PANTHER PTHR30353 20 152 1.0E-45 T 23-04-2016 IPR032818 DedA family VV93_RS12645 2be3cd98c4d5de0b7595727054f0e0ea 153 Pfam PF09335 SNARE associated Golgi protein 54 148 7.6E-10 T 23-04-2016 IPR032816 SNARE associated Golgi protein VV93_RS04685 042b5f5b9fd7d7e360e1d2f050cab5dd 150 Gene3D G3DSA:2.40.50.140 93 147 5.3E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold VV93_RS04685 042b5f5b9fd7d7e360e1d2f050cab5dd 150 PANTHER PTHR33507 2 150 2.4E-40 T 23-04-2016 VV93_RS04685 042b5f5b9fd7d7e360e1d2f050cab5dd 150 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 148 3.9E-24 T 23-04-2016 IPR002810 NfeD-like, C-terminal domain VV93_RS04685 042b5f5b9fd7d7e360e1d2f050cab5dd 150 PANTHER PTHR33507:SF3 2 150 2.4E-40 T 23-04-2016 VV93_RS04685 042b5f5b9fd7d7e360e1d2f050cab5dd 150 SUPERFAMILY SSF141322 91 147 6.67E-6 T 23-04-2016 VV93_RS09645 9346231326f35c4d4d8e2378fb91aab9 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 1.7E-18 T 23-04-2016 IPR025346 Protein of unknown function DUF4250 VV93_RS03810 aa2ceaab7ff68f02d0ebf990ed4d132d 145 Pfam PF10980 Protein of unknown function (DUF2787) 14 139 1.7E-40 T 23-04-2016 IPR021248 Protein of unknown function DUF2787 VV93_RS03810 aa2ceaab7ff68f02d0ebf990ed4d132d 145 PANTHER PTHR38978:SF1 1 141 1.5E-114 T 23-04-2016 VV93_RS03810 aa2ceaab7ff68f02d0ebf990ed4d132d 145 PANTHER PTHR38978 1 141 1.5E-114 T 23-04-2016 VV93_RS10790 e0ae9f3a0558879c85135ca4c9d5dffe 87 Pfam PF08891 YfcL protein 4 84 2.4E-31 T 23-04-2016 IPR014987 Uncharacterised protein family YfcL VV93_RS13985 1bc73a6637984816ad1cfbb1b73df7f5 336 SUPERFAMILY SSF51735 1 335 3.59E-97 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS13985 1bc73a6637984816ad1cfbb1b73df7f5 336 Gene3D G3DSA:3.90.25.10 179 231 3.1E-53 T 23-04-2016 VV93_RS13985 1bc73a6637984816ad1cfbb1b73df7f5 336 Gene3D G3DSA:3.90.25.10 263 336 3.1E-53 T 23-04-2016 VV93_RS13985 1bc73a6637984816ad1cfbb1b73df7f5 336 PANTHER PTHR10366 2 336 2.4E-153 T 23-04-2016 VV93_RS13985 1bc73a6637984816ad1cfbb1b73df7f5 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 9.8E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS13985 1bc73a6637984816ad1cfbb1b73df7f5 336 Gene3D G3DSA:3.40.50.720 1 178 2.2E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain VV93_RS13985 1bc73a6637984816ad1cfbb1b73df7f5 336 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 2.5E-141 T 23-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 VV93_RS13985 1bc73a6637984816ad1cfbb1b73df7f5 336 PANTHER PTHR10366:SF39 2 336 2.4E-153 T 23-04-2016 VV93_RS12865 2922fcc59715036b038ea790a86694b2 156 PANTHER PTHR35867:SF1 5 156 3.4E-28 T 23-04-2016 VV93_RS12865 2922fcc59715036b038ea790a86694b2 156 PANTHER PTHR35867 5 156 3.4E-28 T 23-04-2016 VV93_RS12865 2922fcc59715036b038ea790a86694b2 156 PIRSF PIRSF004923 1 156 2.2E-38 T 23-04-2016 IPR026268 Protein RseC VV93_RS12865 2922fcc59715036b038ea790a86694b2 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 19 149 5.6E-31 T 23-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC VV93_RS11950 5e0c455dbd480992f2456bd071305863 321 Pfam PF00482 Type II secretion system (T2SS), protein F 154 279 1.0E-18 T 23-04-2016 IPR018076 Type II secretion system F domain VV93_RS11950 5e0c455dbd480992f2456bd071305863 321 PANTHER PTHR35007 31 321 4.5E-45 T 23-04-2016 VV93_RS11950 5e0c455dbd480992f2456bd071305863 321 PANTHER PTHR35007:SF1 31 321 4.5E-45 T 23-04-2016 VV93_RS06470 adbfe73ec12ee4e5f4ee9abfd7a043b7 533 Pfam PF03553 Na+/H+ antiporter family 165 497 8.7E-106 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VV93_RS06470 adbfe73ec12ee4e5f4ee9abfd7a043b7 533 PANTHER PTHR33451:SF7 1 531 6.2E-217 T 23-04-2016 VV93_RS06470 adbfe73ec12ee4e5f4ee9abfd7a043b7 533 PANTHER PTHR33451 1 531 6.2E-217 T 23-04-2016 VV93_RS02030 499200c27f4205ee506394dc1192c0d0 69 Gene3D G3DSA:3.30.1910.10 2 65 5.3E-28 T 23-04-2016 VV93_RS02030 499200c27f4205ee506394dc1192c0d0 69 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 2.0E-32 T 23-04-2016 IPR009491 Protein of unknown function DUF1107 VV93_RS02030 499200c27f4205ee506394dc1192c0d0 69 Pfam PF06526 Protein of unknown function (DUF1107) 2 64 8.6E-27 T 23-04-2016 IPR009491 Protein of unknown function DUF1107 VV93_RS05220 0259835cb1a4332a79cc36fcf5f62e9a 332 PANTHER PTHR33376 1 332 1.5E-162 T 23-04-2016 VV93_RS05220 0259835cb1a4332a79cc36fcf5f62e9a 332 PIRSF PIRSF006470 1 332 2.2E-121 T 23-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 VV93_RS05220 0259835cb1a4332a79cc36fcf5f62e9a 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 2.0E-104 T 23-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 VV93_RS05220 0259835cb1a4332a79cc36fcf5f62e9a 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 277 1.1E-78 T 23-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 VV93_RS05220 0259835cb1a4332a79cc36fcf5f62e9a 332 PANTHER PTHR33376:SF7 1 332 1.5E-162 T 23-04-2016 VV93_RS14085 df90b6c1f544fc6e812d16069bbd8cff 159 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 1.9E-28 T 23-04-2016 IPR012659 Conserved hypothetical protein CHP02444 VV93_RS14085 df90b6c1f544fc6e812d16069bbd8cff 159 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 2.0E-42 T 23-04-2016 IPR012659 Conserved hypothetical protein CHP02444 VV93_RS09260 8ba644a84c5d6acba5192813ca064068 319 Pfam PF14321 Domain of unknown function (DUF4382) 29 176 1.5E-24 T 23-04-2016 IPR025491 Domain of unknown function DUF4382 VV93_RS08455 bfc45c56cb4afd3b791b00aa27e7d4cb 173 Pfam PF13527 Acetyltransferase (GNAT) domain 9 125 1.7E-10 T 23-04-2016 VV93_RS08455 bfc45c56cb4afd3b791b00aa27e7d4cb 173 SUPERFAMILY SSF55729 10 132 2.36E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS08455 bfc45c56cb4afd3b791b00aa27e7d4cb 173 Gene3D G3DSA:3.40.630.30 8 127 1.7E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase VV93_RS02270 55d44e164da3c17bbf83b409425a934e 158 Pfam PF12821 Threonine/Serine exporter, ThrE 14 148 6.2E-36 T 23-04-2016 IPR024528 Threonine/Serine exporter, ThrE VV93_RS02270 55d44e164da3c17bbf83b409425a934e 158 PANTHER PTHR34390 1 158 2.4E-48 T 23-04-2016 VV93_RS06415 93eeaddf7cd43c4dc023173e8bbab605 257 PANTHER PTHR33973 4 255 1.7E-62 T 23-04-2016 VV93_RS06415 93eeaddf7cd43c4dc023173e8bbab605 257 Pfam PF07103 Protein of unknown function (DUF1365) 9 245 3.5E-68 T 23-04-2016 IPR010775 Protein of unknown function DUF1365 VV93_RS05155 1adffe5074e7d5e620133f4e8cbc49b3 250 SUPERFAMILY SSF53901 40 160 1.18E-6 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VV93_RS05155 1adffe5074e7d5e620133f4e8cbc49b3 250 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 35 248 6.6E-74 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VV93_RS07325 b4e3f8e2251f6be2fb79bb0ff5fa8844 171 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 26 162 2.5E-18 T 23-04-2016 IPR009936 Protein of unknown function DUF1468 VV93_RS19525 cfc44bbddec9ed7faae616b15d6e4df1 61 SUPERFAMILY SSF117143 2 57 4.05E-13 T 23-04-2016 VV93_RS19525 cfc44bbddec9ed7faae616b15d6e4df1 61 PANTHER PTHR30435 1 61 1.7E-21 T 23-04-2016 VV93_RS19525 cfc44bbddec9ed7faae616b15d6e4df1 61 PANTHER PTHR30435:SF19 1 61 1.7E-21 T 23-04-2016 VV93_RS10740 6e3309bc8108ab57b4ce0c69b1836979 163 Pfam PF02674 Colicin V production protein 4 142 9.3E-36 T 23-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 VV93_RS10740 6e3309bc8108ab57b4ce0c69b1836979 163 PANTHER PTHR36926:SF1 1 163 1.5E-79 T 23-04-2016 VV93_RS10740 6e3309bc8108ab57b4ce0c69b1836979 163 PANTHER PTHR36926 1 163 1.5E-79 T 23-04-2016 VV93_RS01280 e81e46a4a57e2edff48e1b5fa3322e42 226 Pfam PF07885 Ion channel 133 217 5.8E-17 T 23-04-2016 IPR013099 Potassium channel domain VV93_RS01280 e81e46a4a57e2edff48e1b5fa3322e42 226 SUPERFAMILY SSF81324 126 218 8.11E-18 T 23-04-2016 VV93_RS01280 e81e46a4a57e2edff48e1b5fa3322e42 226 Gene3D G3DSA:1.10.287.70 123 216 3.3E-18 T 23-04-2016 VV93_RS06680 c3eb2d8d9a57b0227e8724ce7a4b058d 77 Pfam PF06667 Phage shock protein B 4 74 9.1E-32 T 23-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VV93_RS06680 c3eb2d8d9a57b0227e8724ce7a4b058d 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 4.1E-35 T 23-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VV93_RS05655 940cfe7c406c4a690264c00f4b31e7de 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 2.6E-6 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS05655 940cfe7c406c4a690264c00f4b31e7de 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 2.6E-6 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VV93_RS05655 940cfe7c406c4a690264c00f4b31e7de 441 Pfam PF03553 Na+/H+ antiporter family 150 435 4.5E-77 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VV93_RS05655 940cfe7c406c4a690264c00f4b31e7de 441 Pfam PF13726 Na+-H+ antiporter family 2 88 1.3E-35 T 23-04-2016 IPR032813 Putative Na+/H+ antiporter, N-terminal VV93_RS05655 940cfe7c406c4a690264c00f4b31e7de 441 PANTHER PTHR37821 1 441 4.4E-191 T 23-04-2016 VV93_RS13965 b1aa9617d4e7c3a9359a5008310ffd9e 112 Pfam PF11333 Protein of unknown function (DUF3135) 9 89 4.5E-33 T 23-04-2016 IPR021482 Protein of unknown function DUF3135 VV93_RS11170 6ac5bec8701ecad4d6dfa0aa12510517 731 Pfam PF00589 Phage integrase family 352 539 3.8E-6 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS11170 6ac5bec8701ecad4d6dfa0aa12510517 731 SUPERFAMILY SSF56349 352 541 2.38E-8 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV93_RS11170 6ac5bec8701ecad4d6dfa0aa12510517 731 Gene3D G3DSA:1.10.443.10 349 540 6.0E-10 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV93_RS01505 d8afdaf6d8d33a70829705ff4e1a0c00 129 PANTHER PTHR34299 3 129 2.2E-41 T 23-04-2016 VV93_RS01505 d8afdaf6d8d33a70829705ff4e1a0c00 129 PANTHER PTHR34299:SF1 3 129 2.2E-41 T 23-04-2016 VV93_RS01505 d8afdaf6d8d33a70829705ff4e1a0c00 129 Pfam PF01219 Prokaryotic diacylglycerol kinase 22 122 3.9E-35 T 23-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 VV93_RS01505 d8afdaf6d8d33a70829705ff4e1a0c00 129 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 76 87 - T 23-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 VV93_RS01505 d8afdaf6d8d33a70829705ff4e1a0c00 129 Gene3D G3DSA:1.10.3830.10 10 127 2.0E-45 T 23-04-2016 VV93_RS03900 aa5850abe827bbf625dc531b6ea816a9 428 Gene3D G3DSA:2.130.10.10 49 108 4.4E-6 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VV93_RS03900 aa5850abe827bbf625dc531b6ea816a9 428 Gene3D G3DSA:2.130.10.10 307 399 4.4E-6 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VV93_RS03900 aa5850abe827bbf625dc531b6ea816a9 428 SUPERFAMILY SSF51004 37 264 1.7E-9 T 23-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain VV93_RS07145 b9d3bfbe9304ed8097e6f9eea60d213d 170 PANTHER PTHR30399 1 163 4.2E-96 T 23-04-2016 VV93_RS07145 b9d3bfbe9304ed8097e6f9eea60d213d 170 Pfam PF01863 Protein of unknown function DUF45 94 150 1.2E-9 T 23-04-2016 IPR002725 Protein of unknown function DUF45 VV93_RS07145 b9d3bfbe9304ed8097e6f9eea60d213d 170 PANTHER PTHR30399:SF4 1 163 4.2E-96 T 23-04-2016 VV93_RS13760 e1fe0accdb18075ad06a5621ef5de14c 255 Gene3D G3DSA:2.40.160.10 46 135 1.1E-4 T 23-04-2016 IPR023614 Porin domain VV93_RS13760 e1fe0accdb18075ad06a5621ef5de14c 255 Pfam PF04338 Protein of unknown function, DUF481 40 255 3.7E-51 T 23-04-2016 IPR007433 Protein of unknown function DUF481 VV93_RS08420 88af5893b249facd9087c292d793cdbb 88 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 6 81 3.1E-23 T 23-04-2016 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system VV93_RS02010 e5be2ee4dd7480dbfc52f81e4d96f2b9 234 SUPERFAMILY SSF52540 5 225 8.8E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02010 e5be2ee4dd7480dbfc52f81e4d96f2b9 234 PANTHER PTHR24220 10 225 1.3E-79 T 23-04-2016 VV93_RS02010 e5be2ee4dd7480dbfc52f81e4d96f2b9 234 Gene3D G3DSA:3.40.50.300 8 225 9.3E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02010 e5be2ee4dd7480dbfc52f81e4d96f2b9 234 PANTHER PTHR24220:SF578 10 225 1.3E-79 T 23-04-2016 VV93_RS02010 e5be2ee4dd7480dbfc52f81e4d96f2b9 234 Pfam PF00005 ABC transporter 30 180 2.5E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV93_RS02010 e5be2ee4dd7480dbfc52f81e4d96f2b9 234 SMART SM00382 35 228 3.0E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain VV93_RS06640 59ef010200bf5b8e46a48b2adcf5555c 260 Pfam PF11150 Protein of unknown function (DUF2927) 33 230 1.5E-64 T 23-04-2016 IPR021323 Protein of unknown function DUF2927 VV93_RS02015 f280a68020b1dae1f083c9ffdb89fa3e 247 Pfam PF10986 Protein of unknown function (DUF2796) 29 242 1.6E-34 T 23-04-2016 IPR021253 Protein of unknown function DUF2796 VV93_RS07060 821b78907f9c1143d684b98f64b4e528 123 Pfam PF03788 LrgA family 23 114 7.3E-26 T 23-04-2016 IPR005538 LrgA/CidA family GO:0016021 VV93_RS07060 821b78907f9c1143d684b98f64b4e528 123 PANTHER PTHR33931 6 122 7.1E-32 T 23-04-2016 VV93_RS07060 821b78907f9c1143d684b98f64b4e528 123 PANTHER PTHR33931:SF2 6 122 7.1E-32 T 23-04-2016 VV93_RS09760 d09e6df8e16b21f04e444bbbc1eb3d8e 180 PANTHER PTHR39166 3 180 2.8E-55 T 23-04-2016 VV93_RS09760 d09e6df8e16b21f04e444bbbc1eb3d8e 180 Pfam PF06042 Nucleotidyltransferase 25 178 5.3E-58 T 23-04-2016 IPR009267 Putative nucleotidyltransferase VV93_RS10330 bff80c452c2b14a994c848c02b0848a5 55 Pfam PF10689 Protein of unknown function (DUF2496) 8 50 2.6E-23 T 23-04-2016 IPR019630 Protein of unknown function DUF2496, YbaM-related VV93_RS03725 49e1c2c4a709a5219f0fc524f18f1de1 251 Pfam PF05742 Transport and Golgi organisation 2 1 120 3.5E-8 T 23-04-2016 IPR008551 Transport and Golgi organisation protein 2 VV93_RS13650 3041eeb8fd1249e7ac5f73da73c4eb04 113 Pfam PF13358 DDE superfamily endonuclease 6 87 1.4E-18 T 23-04-2016 VV93_RS02720 0422d03c7048652cf00d3ac29a176aa3 367 SUPERFAMILY SSF52540 62 201 1.52E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS02720 0422d03c7048652cf00d3ac29a176aa3 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 53.367 T 23-04-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 VV93_RS02720 0422d03c7048652cf00d3ac29a176aa3 367 PANTHER PTHR12169 1 366 2.9E-182 T 23-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 VV93_RS02720 0422d03c7048652cf00d3ac29a176aa3 367 Pfam PF03969 AFG1-like ATPase 1 364 4.3E-156 T 23-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 VV93_RS02720 0422d03c7048652cf00d3ac29a176aa3 367 PANTHER PTHR12169:SF11 1 366 2.9E-182 T 23-04-2016 VV93_RS02720 0422d03c7048652cf00d3ac29a176aa3 367 Gene3D G3DSA:3.40.50.300 10 177 2.4E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS05490 a187052160f702892328087f2372b22d 94 Pfam PF07023 Protein of unknown function (DUF1315) 4 84 3.2E-29 T 23-04-2016 IPR009749 Protein of unknown function DUF1315 VV93_RS03730 4b8e4ab4db1b1211511e1675938a518e 145 Pfam PF04945 YHS domain 39 83 3.7E-11 T 23-04-2016 IPR007029 YHS domain VV93_RS14500 6b5eb49ef223c26e7da3ca64bf90f315 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 3.7E-35 T 23-04-2016 IPR019886 Sodium symporter small subunit, predicted VV93_RS14500 6b5eb49ef223c26e7da3ca64bf90f315 88 Pfam PF13937 Domain of unknown function (DUF4212) 9 85 1.3E-34 T 23-04-2016 IPR019886 Sodium symporter small subunit, predicted VV93_RS09800 314d26e9473f57ff55aea6483569fdc5 306 PANTHER PTHR34631:SF2 3 306 5.1E-197 T 23-04-2016 VV93_RS09800 314d26e9473f57ff55aea6483569fdc5 306 Pfam PF13737 Transposase DDE domain 19 129 5.1E-45 T 23-04-2016 IPR025668 Transposase DDE domain VV93_RS09800 314d26e9473f57ff55aea6483569fdc5 306 PANTHER PTHR34631 3 306 5.1E-197 T 23-04-2016 VV93_RS04680 a14ac79c6ce800621753d78f84d76942 122 Pfam PF10973 Protein of unknown function (DUF2799) 29 110 1.8E-14 T 23-04-2016 IPR021242 Protein of unknown function DUF2799 VV93_RS10580 d30d97d13d8d20a3b0966a159db08a42 494 SUPERFAMILY SSF48208 34 455 4.17E-55 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 VV93_RS10580 d30d97d13d8d20a3b0966a159db08a42 494 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 95 206 3.6E-10 T 23-04-2016 VV93_RS10580 d30d97d13d8d20a3b0966a159db08a42 494 Gene3D G3DSA:1.50.10.10 83 313 9.5E-19 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 VV93_RS00680 5f96f1f9c177f917df41d6e546b76024 330 Pfam PF11168 Protein of unknown function (DUF2955) 9 148 1.9E-29 T 23-04-2016 IPR022604 Protein of unknown function DUF2955 VV93_RS10855 d56be8e6d31fd9adeeef7ea1ceac767d 438 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 20 438 5.4E-130 T 23-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VV93_RS10855 d56be8e6d31fd9adeeef7ea1ceac767d 438 Gene3D G3DSA:2.40.160.60 26 438 3.9E-130 T 23-04-2016 VV93_RS10855 d56be8e6d31fd9adeeef7ea1ceac767d 438 PANTHER PTHR35093 3 438 7.7E-154 T 23-04-2016 VV93_RS10855 d56be8e6d31fd9adeeef7ea1ceac767d 438 PANTHER PTHR35093:SF2 3 438 7.7E-154 T 23-04-2016 VV93_RS10855 d56be8e6d31fd9adeeef7ea1ceac767d 438 SUPERFAMILY SSF56935 26 438 2.32E-101 T 23-04-2016 VV93_RS01645 054b8aaf9dde9d5ba91f0fa3b5de58c1 265 Pfam PF06251 Capsule biosynthesis GfcC 34 263 1.6E-75 T 23-04-2016 IPR010425 Domain of unknown function DUF1017 VV93_RS06635 1cc110fef979200b5b6b26caefecb4fb 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 6.7E-35 T 23-04-2016 IPR021284 Protein of unknown function DUF2750 VV93_RS07600 39f62be89cf5b839ad11425416076171 211 Pfam PF13505 Outer membrane protein beta-barrel domain 8 180 1.1E-6 T 23-04-2016 IPR027385 Outer membrane protein beta-barrel VV93_RS07600 39f62be89cf5b839ad11425416076171 211 SUPERFAMILY SSF56925 29 180 8.63E-5 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VV93_RS15230 3a18077caf83a9474063bc9ef919555f 129 Pfam PF03899 ATP synthase I chain 16 111 2.9E-16 T 23-04-2016 IPR005598 ATP synthase protein I VV93_RS08725 48d039973c7b71b09f2469182efd3cb5 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 5.6E-98 T 23-04-2016 IPR021974 Protein of unknown function DUF3581 VV93_RS06995 d422fe90f23cad363db55fd3e83b2ac4 219 Pfam PF10014 2OG-Fe dioxygenase 25 209 1.4E-53 T 23-04-2016 IPR018724 2OG-Fe dioxygenase VV93_RS11255 1bf1a8c4b3586d909473da87412ff53c 356 PANTHER PTHR21716 6 356 1.7E-152 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like VV93_RS11255 1bf1a8c4b3586d909473da87412ff53c 356 Pfam PF01594 Domain of unknown function DUF20 20 345 1.9E-78 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like VV93_RS11255 1bf1a8c4b3586d909473da87412ff53c 356 PANTHER PTHR21716:SF19 6 356 1.7E-152 T 23-04-2016 VV93_RS18035 58009fc8c443289268c5f8b08bb965e3 67 SUPERFAMILY SSF55785 3 59 4.89E-7 T 23-04-2016 IPR000014 PAS domain VV93_RS18035 58009fc8c443289268c5f8b08bb965e3 67 Pfam PF08448 PAS fold 1 61 8.0E-7 T 23-04-2016 IPR013656 PAS fold-4 VV93_RS18035 58009fc8c443289268c5f8b08bb965e3 67 Gene3D G3DSA:3.30.450.20 3 59 9.9E-6 T 23-04-2016 VV93_RS15570 902bf87191da4d76349577c2a10c2309 95 SUPERFAMILY SSF48179 2 57 1.45E-9 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VV93_RS11345 d1ae86ffddf8701ab3982935384d7d37 416 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 399 1.7E-135 T 23-04-2016 IPR020010 Conserved hypothetical protein CHP03503 VV93_RS08650 a0870b3469c1e6289c1b19ce6c8e17d5 69 Pfam PF03692 Putative zinc- or iron-chelating domain 22 56 7.4E-8 T 23-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein VV93_RS08635 4bffac8ca6b7e689c954e41ec36ac8e5 363 Pfam PF14022 Protein of unknown function (DUF4238) 6 252 3.9E-34 T 23-04-2016 IPR025332 Protein of unknown function DUF4238 VV93_RS03940 ac6ce3a4245d36a366ecd10d1f485781 222 PIRSF PIRSF004525 8 222 1.3E-8 T 23-04-2016 IPR016419 Prepilin peptidase-dependent protein B, predicted VV93_RS05345 c4ea9913a5f10e4ec50ec1f714e75268 311 PANTHER PTHR30106 8 311 1.8E-115 T 23-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 VV93_RS05345 c4ea9913a5f10e4ec50ec1f714e75268 311 Pfam PF03601 Conserved hypothetical protein 698 25 291 2.4E-54 T 23-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 VV93_RS05345 c4ea9913a5f10e4ec50ec1f714e75268 311 PANTHER PTHR30106:SF1 8 311 1.8E-115 T 23-04-2016 VV93_RS09905 265544770fc159b5f0030af0cf2dfb3a 58 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 51 4.6E-26 T 23-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) VV93_RS09905 265544770fc159b5f0030af0cf2dfb3a 58 PANTHER PTHR36154 1 58 2.7E-18 T 23-04-2016 VV93_RS07705 18baf03d9aac01c98ac9258fc807ed05 106 Pfam PF01740 STAS domain 10 99 8.7E-11 T 23-04-2016 IPR002645 STAS domain VV93_RS07705 18baf03d9aac01c98ac9258fc807ed05 106 Gene3D G3DSA:3.30.750.24 7 103 5.4E-22 T 23-04-2016 IPR002645 STAS domain VV93_RS07705 18baf03d9aac01c98ac9258fc807ed05 106 SUPERFAMILY SSF52091 7 101 2.75E-20 T 23-04-2016 IPR002645 STAS domain VV93_RS02480 5d654d2f2da4ed1cab262c43b5557475 212 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 3 212 7.4E-37 T 23-04-2016 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 VV93_RS02480 5d654d2f2da4ed1cab262c43b5557475 212 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 4 212 9.8E-51 T 23-04-2016 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 VV93_RS02980 a9e3221be882cf93b5adf8370c799773 154 PIRSF PIRSF028680 1 154 1.7E-77 T 23-04-2016 IPR016895 Uncharacterised conserved protein UCP028680 VV93_RS09960 248ae111ec5a5e6d850697a9fcde1bd7 69 SUPERFAMILY SSF46955 7 59 2.75E-5 T 23-04-2016 IPR009061 Putative DNA-binding domain VV93_RS09960 248ae111ec5a5e6d850697a9fcde1bd7 69 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 7 56 1.4E-21 T 23-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) VV93_RS09960 248ae111ec5a5e6d850697a9fcde1bd7 69 PANTHER PTHR36154 6 69 5.0E-16 T 23-04-2016 VV93_RS14885 c4555981726f3cbff4c91816ba3435a9 257 Pfam PF09836 Putative DNA-binding domain 5 95 2.8E-21 T 23-04-2016 IPR018640 Putative DNA-binding domain, bacteria VV93_RS11975 a963990a267c6961c2451445287cbe12 406 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 17 61 1.9E-10 T 23-04-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal VV93_RS13000 1658bc31f17c463d79704ce43dc6f5f9 264 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 3.1E-27 T 23-04-2016 IPR018692 Predicted integral membrane protein DUF2189 VV93_RS00520 7105e717e64be2a119483c737fee1cfb 337 Pfam PF01757 Acyltransferase family 7 327 1.6E-37 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 VV93_RS10870 6465d03ad9320729cbad837ab0404afb 160 Pfam PF03918 Cytochrome C biogenesis protein 9 151 2.4E-55 T 23-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family VV93_RS10870 6465d03ad9320729cbad837ab0404afb 160 PANTHER PTHR30009:SF6 12 154 1.2E-35 T 23-04-2016 VV93_RS10870 6465d03ad9320729cbad837ab0404afb 160 PANTHER PTHR30009 12 154 1.2E-35 T 23-04-2016 VV93_RS01950 57abe3de563172dfbb0a3beec335737b 290 Pfam PF00892 EamA-like transporter family 143 268 2.1E-8 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VV93_RS01950 57abe3de563172dfbb0a3beec335737b 290 Pfam PF00892 EamA-like transporter family 6 137 5.1E-12 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VV93_RS01950 57abe3de563172dfbb0a3beec335737b 290 PANTHER PTHR22911 1 273 7.7E-89 T 23-04-2016 VV93_RS01950 57abe3de563172dfbb0a3beec335737b 290 PANTHER PTHR22911:SF70 1 273 7.7E-89 T 23-04-2016 VV93_RS01950 57abe3de563172dfbb0a3beec335737b 290 SUPERFAMILY SSF103481 178 268 1.57E-13 T 23-04-2016 VV93_RS01950 57abe3de563172dfbb0a3beec335737b 290 SUPERFAMILY SSF103481 41 141 7.72E-14 T 23-04-2016 VV93_RS07980 2d2c740350cad303c05790e5e5de3f26 158 Pfam PF05751 FixH 7 147 7.2E-44 T 23-04-2016 IPR008620 Nitrogen fixation protein FixH VV93_RS04165 d809bb2d0c0dc0182038c58a4a7a092e 181 Pfam PF07348 Syd protein (SUKH-2) 8 179 6.6E-68 T 23-04-2016 IPR009948 Syd GO:0009898 VV93_RS04165 d809bb2d0c0dc0182038c58a4a7a092e 181 Hamap MF_01104 Protein Syd [syd]. 3 181 37.156 T 23-04-2016 IPR009948 Syd GO:0009898 VV93_RS04535 2a8eb4f63c254f0ddabe4ac089673d04 143 PIRSF PIRSF028687 1 143 6.3E-59 T 23-04-2016 IPR007293 Flagellar protein FlgP VV93_RS04535 2a8eb4f63c254f0ddabe4ac089673d04 143 Pfam PF02169 LPP20 lipoprotein 20 118 4.7E-9 T 23-04-2016 IPR024952 Lipoprotein LPP20-like VV93_RS10325 2515c6f9d9a1283e9343c4c3da697ede 181 Pfam PF07445 Primosomal replication protein priC 5 178 6.0E-50 T 23-04-2016 IPR010890 Primosomal replication PriB/PriC VV93_RS05635 599c156a2ad94c2e351ce4b0dded68eb 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 159 1.0E-59 T 23-04-2016 IPR021879 Ribosomal S4P (gammaproteobacterial) VV93_RS05795 20722c5056ff4872258b744a97097058 130 PIRSF PIRSF007010 1 130 4.4E-55 T 23-04-2016 IPR016502 Type II secretion system (T2SS) pilotin, S protein VV93_RS05795 20722c5056ff4872258b744a97097058 130 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 15 128 1.8E-48 T 23-04-2016 IPR016502 Type II secretion system (T2SS) pilotin, S protein VV93_RS08605 ccf66f326808799e1a3719d57ef9a174 110 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 4 105 3.1E-10 T 23-04-2016 IPR009387 Toxin HigB-2 VV93_RS08605 ccf66f326808799e1a3719d57ef9a174 110 PIRSF PIRSF039032 1 110 1.7E-45 T 23-04-2016 IPR009387 Toxin HigB-2 VV93_RS09055 c0ff43459d91c378e69dea9a4eb23fc1 434 Pfam PF06629 MltA-interacting protein MipA 43 236 1.4E-20 T 23-04-2016 IPR010583 MltA-interacting MipA VV93_RS01935 67c4a14e77f8364ca998ce135a94cfbc 164 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 45 160 1.3E-23 T 23-04-2016 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE VV93_RS07420 99129639442c211ed91bf1961108687d 116 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 1.1E-32 T 23-04-2016 IPR021284 Protein of unknown function DUF2750 VV93_RS11515 875b8dc74291a6dc043f4e478085b5d4 99 Pfam PF11743 Protein of unknown function (DUF3301) 6 96 1.4E-27 T 23-04-2016 IPR021732 Protein of unknown function DUF3301 VV93_RS02970 ccf82cdfae796eaac92a7a4d0541f74c 135 Pfam PF11697 Protein of unknown function (DUF3293) 36 105 1.9E-19 T 23-04-2016 IPR021710 Protein of unknown function DUF3293 VV93_RS03720 33f5b376fe54c59e7b954fef94ee284b 184 PANTHER PTHR39473 14 182 7.3E-30 T 23-04-2016 VV93_RS03720 33f5b376fe54c59e7b954fef94ee284b 184 PANTHER PTHR39473:SF1 14 182 7.3E-30 T 23-04-2016 VV93_RS08230 1be2bc65d65fc681396e7d672b209bed 114 Pfam PF12290 Protein of unknown function (DUF3802) 2 110 7.2E-42 T 23-04-2016 IPR020979 Uncharacterised protein family A0KLC6 VV93_RS08945 a29830b728c0f96301fd9d32a3cb25c5 165 Pfam PF13505 Outer membrane protein beta-barrel domain 5 164 9.8E-14 T 23-04-2016 IPR027385 Outer membrane protein beta-barrel VV93_RS08945 a29830b728c0f96301fd9d32a3cb25c5 165 SUPERFAMILY SSF56925 17 164 6.54E-22 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VV93_RS08945 a29830b728c0f96301fd9d32a3cb25c5 165 Gene3D G3DSA:2.40.160.20 6 164 9.4E-19 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VV93_RS07620 d61852d8cc86328f029696fe10437e18 213 Pfam PF02397 Bacterial sugar transferase 15 208 9.9E-52 T 23-04-2016 IPR003362 Bacterial sugar transferase VV93_RS07620 d61852d8cc86328f029696fe10437e18 213 PANTHER PTHR30576 12 213 2.5E-78 T 23-04-2016 VV93_RS03715 b8bc7d309718a1194a2a0c4080d6284e 375 SUPERFAMILY SSF56059 250 310 5.77E-8 T 23-04-2016 VV93_RS03715 b8bc7d309718a1194a2a0c4080d6284e 375 SUPERFAMILY SSF56059 120 180 5.77E-8 T 23-04-2016 VV93_RS11135 8b981aa99a22b281e9f3763bb72523f3 68 Pfam PF11446 Protein of unknown function (DUF2897) 5 57 1.1E-21 T 23-04-2016 IPR021550 Protein of unknown function DUF2897 VV93_RS04870 9aef2ba9dad0c1006af4c6c936bddb20 252 Pfam PF08907 Domain of unknown function (DUF1853) 8 216 9.4E-39 T 23-04-2016 IPR015003 Protein of unknown function DUF1853 VV93_RS11510 ef675287e397c365e90208e63393779d 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 339 3.8E-137 T 23-04-2016 IPR021936 Protein of unknown function DUF3549 VV93_RS12080 55e964d1904c8098b3cea99934085a86 203 Pfam PF10144 Bacterial virulence factor haemolysin 7 151 5.5E-38 T 23-04-2016 IPR019305 Uncharacterised protein family Smp VV93_RS07120 bce911b154cce0c679f8de2c0cdc3db7 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 1.3E-9 T 23-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VV93_RS07120 bce911b154cce0c679f8de2c0cdc3db7 191 Gene3D G3DSA:1.10.3420.10 166 187 1.5E-17 T 23-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain VV93_RS07120 bce911b154cce0c679f8de2c0cdc3db7 191 Gene3D G3DSA:1.10.3420.10 12 127 1.5E-17 T 23-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain VV93_RS00055 99a4b609d6667a73b2103e17346cea0a 184 PANTHER PTHR12608 1 184 4.0E-37 T 23-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 VV93_RS00055 99a4b609d6667a73b2103e17346cea0a 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 2.6E-20 T 23-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 VV93_RS00055 99a4b609d6667a73b2103e17346cea0a 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 3.3E-19 T 23-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 VV93_RS10375 f2bcb527f11689ab2187163e828ffd0f 515 Pfam PF11840 Protein of unknown function (DUF3360) 11 515 2.4E-269 T 23-04-2016 IPR021794 Protein of unknown function DUF3360 VV93_RS14890 0c0c8b9fed9c8ed46337f3c7431d74e0 141 Pfam PF07681 DoxX 24 104 5.1E-18 T 23-04-2016 IPR032808 DoxX family VV93_RS01700 d2935b4d58ae8886b21f053b98c9627d 391 Pfam PF00534 Glycosyl transferases group 1 225 335 1.0E-6 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 VV93_RS01700 d2935b4d58ae8886b21f053b98c9627d 391 SUPERFAMILY SSF53756 73 334 4.33E-14 T 23-04-2016 VV93_RS03820 c45afc075473276922a032765c2692ee 397 Pfam PF14236 Domain of unknown function (DUF4338) 42 335 9.7E-58 T 23-04-2016 IPR025639 Domain of unknown function DUF4338 VV93_RS08020 3cc7fd00c908a89f94480c9ff29e8672 262 PANTHER PTHR40572 40 262 1.3E-61 T 23-04-2016 VV93_RS08020 3cc7fd00c908a89f94480c9ff29e8672 262 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 120 256 2.5E-17 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VV93_RS02340 9e5a30df31c23cfe8a7b1049bf484668 255 Pfam PF08239 Bacterial SH3 domain 130 182 1.9E-11 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type VV93_RS14975 6770b3e70b0143bddd4d71c29edc1f4a 118 Pfam PF13358 DDE superfamily endonuclease 6 87 3.0E-18 T 23-04-2016 VV93_RS02485 c9919493b6450c3e91b43853aac44b93 223 Pfam PF14103 Domain of unknown function (DUF4276) 8 218 1.0E-45 T 23-04-2016 IPR025455 Protein of unknown function DUF4276 VV93_RS11235 620a6a5c9dfe849613dba0fa5f402491 282 SUPERFAMILY SSF52540 6 96 2.25E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS11730 780fa5ad21600dfe54ce996ca1a72375 155 Pfam PF11012 Protein of unknown function (DUF2850) 69 146 1.9E-31 T 23-04-2016 IPR021271 Protein of unknown function DUF2850 VV93_RS09780 93fbefdef7db7b06bb468efad5453281 123 Pfam PF13453 Transcription factor zinc-finger 2 39 1.4E-10 T 23-04-2016 IPR027392 Transcription factor zinc-finger VV93_RS04490 9c3fdbac65f6ccd1ef4630119fcb605d 149 Pfam PF04214 Protein of unknown function, DUF 48 118 5.1E-29 T 23-04-2016 IPR007332 Protein of unknown function DUF411 VV93_RS13385 d8990f4122fe7fb2428cac2f3bc46d7d 390 Pfam PF05987 Bacterial protein of unknown function (DUF898) 9 382 8.5E-96 T 23-04-2016 IPR010295 Protein of unknown function DUF898 VV93_RS01740 ff34f10b4a90a15d6fa8e40666337974 198 Pfam PF02397 Bacterial sugar transferase 2 176 1.1E-58 T 23-04-2016 IPR003362 Bacterial sugar transferase VV93_RS01740 ff34f10b4a90a15d6fa8e40666337974 198 PANTHER PTHR30576 1 184 1.2E-108 T 23-04-2016 VV93_RS01740 ff34f10b4a90a15d6fa8e40666337974 198 PANTHER PTHR30576:SF8 1 184 1.2E-108 T 23-04-2016 VV93_RS08200 8ec3a683172c0f61181467e1c9146a34 88 Pfam PF11173 Protein of unknown function (DUF2960) 1 77 1.8E-33 T 23-04-2016 IPR021343 Protein of unknown function DUF2960 VV93_RS10635 1582100946f01e9aa5629df1775c3e23 102 Pfam PF13467 Ribbon-helix-helix domain 16 82 1.4E-23 T 23-04-2016 IPR027373 Ribbon-helix-helix domain VV93_RS15305 06b7c526145056ed607a809999f6d99a 380 Pfam PF13289 SIR2-like domain 172 325 9.3E-13 T 23-04-2016 VV93_RS01005 eab559bed466147fef573ffb99126a64 173 Pfam PF13521 AAA domain 4 164 1.2E-40 T 23-04-2016 VV93_RS01005 eab559bed466147fef573ffb99126a64 173 Gene3D G3DSA:3.40.50.300 3 169 3.8E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS01005 eab559bed466147fef573ffb99126a64 173 SUPERFAMILY SSF52540 4 171 6.71E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV93_RS00960 10e216d7d9937075392fc9d61290649b 181 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 174 16.905 T 23-04-2016 IPR007336 Der GTPase activator VV93_RS00960 10e216d7d9937075392fc9d61290649b 181 Pfam PF04220 Der GTPase activator (YihI) 21 171 2.0E-43 T 23-04-2016 IPR007336 Der GTPase activator VV93_RS07005 81dadb10b7b620067e110cffd64a7370 274 Pfam PF10977 Protein of unknown function (DUF2797) 38 270 8.6E-96 T 23-04-2016 IPR021246 Protein of unknown function DUF2797 VV93_RS04005 d62ffa85d62448cf545aa366c3724326 179 Pfam PF11810 Domain of unknown function (DUF3332) 5 175 3.1E-43 T 23-04-2016 IPR021768 Protein of unknown function DUF3332 VV93_RS03915 c970a1195974a7549c717ea3f96ed092 261 Pfam PF00950 ABC 3 transport family 161 243 5.0E-5 T 23-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 VV93_RS04710 5866a4c4c249daa50f33a73010fe20a9 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 242 4.1E-72 T 23-04-2016 IPR011435 Protein of unknown function DUF1538 VV93_RS11110 248f7dd7fe4149ad97899aba67211995 110 Pfam PF13698 Domain of unknown function (DUF4156) 28 109 7.7E-22 T 23-04-2016 IPR025294 Protein of unknown function DUF4156 VV93_RS11965 2ecb4317b728dced11c0f237cdb27b40 172 Pfam PF07811 TadE-like protein 14 56 2.3E-8 T 23-04-2016 IPR012495 TadE-like VV93_RS07900 8033efb11d16d6a8cbf16e8fa747157f 110 Pfam PF07459 CTX phage RstB protein 2 104 1.0E-25 T 23-04-2016 IPR010008 Vibrio phage CTX, RstB VV93_RS11280 187bc8d015991e880dbf5729d79b8990 144 Pfam PF09842 Predicted membrane protein (DUF2069) 16 118 1.8E-33 T 23-04-2016 IPR018643 Protein of unknown function DUF2069, membrane VV93_RS06425 b532923de94ef82d3aeea55ad7d1bbd3 171 Pfam PF11086 Protein of unknown function (DUF2878) 4 149 3.3E-32 T 23-04-2016 IPR021306 Protein of unknown function DUF2878 VV93_RS00525 7bf77a014ab6e02130673cf9152fe706 109 Pfam PF10694 Protein of unknown function (DUF2500) 2 105 3.8E-27 T 23-04-2016 IPR019635 Protein of unknown function DUF2500 VV93_RS06625 78b6f37e83fe181040bc24756c770664 404 Pfam PF11449 Putative, 10TM heavy-metal exporter 41 402 1.0E-163 T 23-04-2016 IPR021552 Putative, 10TM heavy-metal exporter VV93_RS10250 d1f9928125852b0d360570d7df80c114 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 6.0E-42 T 23-04-2016 IPR019633 Protein of unknown function DUF2498 VV93_RS01295 7a60d46cd1a0badec9f720908b0b337e 330 Pfam PF11168 Protein of unknown function (DUF2955) 9 148 1.9E-29 T 23-04-2016 IPR022604 Protein of unknown function DUF2955 VV93_RS03765 8686b6408f8239af7f921f6ec8a68c5e 199 Pfam PF11726 Protein of unknown function (DUF3296) 35 197 4.5E-32 T 23-04-2016 IPR021723 Inovirus Gp2 VV93_RS12025 8e6b6553f84471d10252509b074bb220 67 Pfam PF06568 Domain of unknown function (DUF1127) 26 58 1.1E-9 T 23-04-2016 IPR009506 Protein of unknown function DUF1127 VV93_RS00470 2b411eb6d42be107517946eaa63774c8 516 PIRSF PIRSF028175 1 516 0.0 T 23-04-2016 IPR014540 Uncharacterised conserved protein UCP028175 VV93_RS12000 1f3599e5f98a91b09328bb05bb613dbd 172 Pfam PF01478 Type IV leader peptidase family 7 111 5.5E-11 T 23-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VV93_RS10795 7434e5979c4c9ed01be2a5571c8bb106 176 Pfam PF04315 Elongation factor P hydroxylase 11 168 2.0E-73 T 23-04-2016 IPR007411 Elongation factor P hydroxylase KEGG: 00053+1.14.-.-|KEGG: 00073+1.14.-.-|KEGG: 00130+1.14.-.-|KEGG: 00253+1.14.-.-|KEGG: 00361+1.14.-.-|KEGG: 00363+1.14.-.-|KEGG: 00380+1.14.-.-|KEGG: 00522+1.14.-.-|KEGG: 00600+1.14.-.-|KEGG: 00624+1.14.-.-|KEGG: 00625+1.14.-.-|KEGG: 00627+1.14.-.-|KEGG: 00903+1.14.-.-|KEGG: 00904+1.14.-.-|KEGG: 00905+1.14.-.-|KEGG: 00906+1.14.-.-|KEGG: 00940+1.14.-.-|KEGG: 00945+1.14.-.-|KEGG: 00966+1.14.-.-|KEGG: 00981+1.14.-.-