AL549_RS00010	PF01553	Acyltransferase
AL549_RS00025	PF01467	Cytidylyltransferase
AL549_RS00030	PF02540	NAD synthase
AL549_RS00035	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL549_RS00035	PF00175	Oxidoreductase NAD-binding domain
AL549_RS00035	PF00970	Oxidoreductase FAD-binding domain
AL549_RS00035	PF03473	MOSC domain
AL549_RS00035	PF03476	MOSC N-terminal beta barrel domain
AL549_RS00040	PF01979	Amidohydrolase family
AL549_RS00045	PF00990	GGDEF domain
AL549_RS00050	PF05661	AL549_RS00050
AL549_RS00055	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL549_RS00060	PF12833	Helix-turn-helix domain
AL549_RS00065	PF00892	EamA-like transporter family
AL549_RS00070	PF03061	Thioesterase superfamily
AL549_RS00080	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS00085	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS00085	PF14785	Maltose transport system permease protein MalF P2 domain
AL549_RS00090	PF13416	Bacterial extracellular solute-binding protein
AL549_RS00100	PF00005	ABC transporter
AL549_RS00100	PF08402	TOBE domain
AL549_RS00105	PF02397	AL549_RS00105
AL549_RS00105	PF13727	CoA-binding domain
AL549_RS00110	PF10082	AL549_RS00110
AL549_RS00115	PF02563	Polysaccharide biosynthesis/export protein
AL549_RS00115	PF10531	SLBB domain
AL549_RS00120	PF02706	Chain length determinant protein
AL549_RS00120	PF13614	AAA domain
AL549_RS00120	PF13807	AL549_RS00120
AL549_RS00125	PF00534	Glycosyl transferases group 1
AL549_RS00125	PF13439	Glycosyltransferase Family 4
AL549_RS00130	PF10364	AL549_RS00130
AL549_RS00135	PF13439	Glycosyltransferase Family 4
AL549_RS00135	PF13692	Glycosyl transferases group 1
AL549_RS00140	PF01943	AL549_RS00140
AL549_RS00145	PF04892	AL549_RS00145
AL549_RS00150	PF13437	HlyD family secretion protein
AL549_RS00150	PF13533	Biotin-lipoyl like
AL549_RS00155	PF00005	ABC transporter
AL549_RS00160	PF00353	Hemolysin-type calcium-binding repeat (2 copies)
AL549_RS00165	PF00196	Bacterial regulatory proteins, luxR family
AL549_RS00170	PF00196	Bacterial regulatory proteins, luxR family
AL549_RS00180	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS00180	PF00672	HAMP domain
AL549_RS00180	PF02743	Cache domain
AL549_RS00185	PF07726	ATPase family associated with various cellular activities (AAA)
AL549_RS00190	PF01882	AL549_RS00190
AL549_RS00195	PF14316	AL549_RS00195
AL549_RS00200	PF00092	von Willebrand factor type A domain
AL549_RS00205	PF00515	Tetratricopeptide repeat
AL549_RS00205	PF13519	von Willebrand factor type A domain
AL549_RS00210	PF13584	AL549_RS00210
AL549_RS00215	PF00990	GGDEF domain
AL549_RS00220	PF00005	ABC transporter
AL549_RS00225	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS00230	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS00235	PF12849	PBP superfamily domain
AL549_RS00240	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS00240	PF00672	HAMP domain
AL549_RS00245	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS00245	PF00672	HAMP domain
AL549_RS00245	PF02743	Cache domain
AL549_RS00250	PF07603	AL549_RS00250
AL549_RS00255	PF07603	AL549_RS00255
AL549_RS00260	PF01483	Proprotein convertase P-domain
AL549_RS00265	PF00593	TonB dependent receptor
AL549_RS00265	PF07715	TonB-dependent Receptor Plug Domain
AL549_RS00270	PF00326	Prolyl oligopeptidase family
AL549_RS00270	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
AL549_RS00275	PF00270	DEAD/DEAH box helicase
AL549_RS00275	PF00271	Helicase conserved C-terminal domain
AL549_RS00280	PF04728	Lipoprotein leucine-zipper
AL549_RS00285	PF01476	LysM domain
AL549_RS00285	PF03734	L,D-transpeptidase catalytic domain
AL549_RS00290	PF00875	DNA photolyase
AL549_RS00290	PF03441	FAD binding domain of DNA photolyase
AL549_RS00295	PF13411	MerR HTH family regulatory protein
AL549_RS00300	PF04463	AL549_RS00300
AL549_RS00300	PF08349	AL549_RS00300
AL549_RS00305	PF01048	Phosphorylase superfamily
AL549_RS00320	PF00990	GGDEF domain
AL549_RS00325	PF11742	AL549_RS00325
AL549_RS00330	PF13533	Biotin-lipoyl like
AL549_RS00335	PF07155	ECF-type riboflavin transporter, S component
AL549_RS00340	PF00005	ABC transporter
AL549_RS00340	PF12558	AL549_RS00340
AL549_RS00345	PF02361	Cobalt transport protein
AL549_RS00350	PF07690	Major Facilitator Superfamily
AL549_RS00355	PF03572	Peptidase family S41
AL549_RS00355	PF07676	WD40-like Beta Propeller Repeat
AL549_RS00355	PF14684	Tricorn protease C1 domain
AL549_RS00355	PF14685	Tricorn protease PDZ domain
AL549_RS00360	PF00583	Acetyltransferase (GNAT) family
AL549_RS00365	PF14542	GCN5-related N-acetyl-transferase
AL549_RS00370	PF07238	PilZ domain
AL549_RS00370	PF12945	Flagellar protein YcgR
AL549_RS00375	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS00375	PF00672	HAMP domain
AL549_RS00385	PF00924	Mechanosensitive ion channel
AL549_RS00390	PF00194	Eukaryotic-type carbonic anhydrase
AL549_RS00395	PF12849	PBP superfamily domain
AL549_RS00400	PF00691	OmpA family
AL549_RS00405	PF02321	Outer membrane efflux protein
AL549_RS00410	PF13437	HlyD family secretion protein
AL549_RS00410	PF13533	Biotin-lipoyl like
AL549_RS00415	PF00005	ABC transporter
AL549_RS00415	PF00664	ABC transporter transmembrane region
AL549_RS00420	PF12245	Bacterial Ig-like domain (group 3)
AL549_RS00425	PF04076	Bacterial OB fold (BOF) protein
AL549_RS00430	PF00072	Response regulator receiver domain
AL549_RS00430	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS00430	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS00430	PF01627	Hpt domain
AL549_RS00430	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS00435	PF00072	Response regulator receiver domain
AL549_RS00435	PF00563	EAL domain
AL549_RS00440	PF00072	Response regulator receiver domain
AL549_RS00440	PF00196	Bacterial regulatory proteins, luxR family
AL549_RS00445	PF00990	GGDEF domain
AL549_RS00450	PF00072	Response regulator receiver domain
AL549_RS00450	PF00196	Bacterial regulatory proteins, luxR family
AL549_RS00460	PF13450	NAD(P)-binding Rossmann-like domain
AL549_RS00470	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS00470	PF03466	LysR substrate binding domain
AL549_RS00475	PF00753	Metallo-beta-lactamase superfamily
AL549_RS00480	PF06629	AL549_RS00480
AL549_RS00485	PF13588	Type I restriction enzyme R protein N terminus (HSDR_N)
AL549_RS00490	PF08212	Lipocalin-like domain
AL549_RS00500	PF11665	AL549_RS00500
AL549_RS00515	PF05016	Plasmid stabilisation system protein
AL549_RS00520	PF04221	RelB antitoxin
AL549_RS00540	PF04664	AL549_RS00540
AL549_RS00545	PF00107	Zinc-binding dehydrogenase
AL549_RS00545	PF08240	Alcohol dehydrogenase GroES-like domain
AL549_RS00550	PF00155	Aminotransferase class I and II
AL549_RS00555	PF00657	GDSL-like Lipase/Acylhydrolase
AL549_RS00560	PF00082	Subtilase family
AL549_RS00560	PF01483	Proprotein convertase P-domain
AL549_RS00560	PF05922	Peptidase inhibitor I9
AL549_RS00570	PF07690	Major Facilitator Superfamily
AL549_RS00575	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS00575	PF03466	LysR substrate binding domain
AL549_RS00580	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_RS00585	PF03929	AL549_RS00585
AL549_RS00600	PF00199	Catalase
AL549_RS00600	PF06628	Catalase-related immune-responsive
AL549_RS00605	PF12796	Ankyrin repeats (3 copies)
AL549_RS00610	PF00080	Copper/zinc superoxide dismutase (SODC)
AL549_RS00615	PF07361	Cytochrome b562
AL549_RS00625	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
AL549_RS00630	PF02743	Cache domain
AL549_RS00630	PF13487	HD domain
AL549_RS00635	PF00892	EamA-like transporter family
AL549_RS00640	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS00640	PF03466	LysR substrate binding domain
AL549_RS00645	PF01906	Putative heavy-metal-binding
AL549_RS00650	PF11301	AL549_RS00650
AL549_RS00655	PF00990	GGDEF domain
AL549_RS00655	PF13426	PAS domain
AL549_RS00655	PF17152	AL549_RS00655
AL549_RS00660	PF13689	AL549_RS00660
AL549_RS00665	PF00593	TonB dependent receptor
AL549_RS00665	PF07715	TonB-dependent Receptor Plug Domain
AL549_RS00670	PF13416	Bacterial extracellular solute-binding protein
AL549_RS00675	PF00056	lactate/malate dehydrogenase, NAD binding domain
AL549_RS00675	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AL549_RS00680	PF00892	EamA-like transporter family
AL549_RS00685	PF03734	L,D-transpeptidase catalytic domain
AL549_RS00690	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS00695	PF07690	Major Facilitator Superfamily
AL549_RS00700	PF12833	Helix-turn-helix domain
AL549_RS00705	PF10928	Protein of unknown function (DUF2810)
AL549_RS00760	PF11286	AL549_RS00760
AL549_RS00765	PF04013	Putative SAM-dependent RNA methyltransferase
AL549_RS00770	PF08543	Phosphomethylpyrimidine kinase
AL549_RS00775	PF01569	PAP2 superfamily
AL549_RS00780	PF00440	Bacterial regulatory proteins, tetR family
AL549_RS00790	PF08282	haloacid dehalogenase-like hydrolase
AL549_RS00795	PF00857	Isochorismatase family
AL549_RS00800	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AL549_RS00805	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AL549_RS00810	PF01323	DSBA-like thioredoxin domain
AL549_RS00830	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS00830	PF03466	LysR substrate binding domain
AL549_RS00835	PF00106	short chain dehydrogenase
AL549_RS00840	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS00840	PF03466	LysR substrate binding domain
AL549_RS00845	PF13460	NADH(P)-binding
AL549_RS00855	PF00072	Response regulator receiver domain
AL549_RS00855	PF00486	Transcriptional regulatory protein, C terminal
AL549_RS00860	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS00860	PF00672	HAMP domain
AL549_RS00860	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS00865	PF01219	Prokaryotic diacylglycerol kinase
AL549_RS00870	PF00884	Sulfatase
AL549_RS00870	PF08019	AL549_RS00870
AL549_RS00875	PF00884	Sulfatase
AL549_RS00880	PF03733	AL549_RS00880
AL549_RS00885	PF00128	Alpha amylase, catalytic domain
AL549_RS00890	PF02018	Carbohydrate binding domain
AL549_RS00890	PF04231	Endonuclease I
AL549_RS00895	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS00905	PF00990	GGDEF domain
AL549_RS00905	PF01590	GAF domain
AL549_RS00910	PF00892	EamA-like transporter family
AL549_RS00915	PF00155	Aminotransferase class I and II
AL549_RS00915	PF00392	Bacterial regulatory proteins, gntR family
AL549_RS00920	PF01432	Peptidase family M3
AL549_RS00940	PF00196	Bacterial regulatory proteins, luxR family
AL549_RS00945	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
AL549_RS00950	PF05958	tRNA (Uracil-5-)-methyltransferase
AL549_RS00955	PF00881	Nitroreductase family
AL549_RS00960	PF00753	Metallo-beta-lactamase superfamily
AL549_RS00965	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS00965	PF03466	LysR substrate binding domain
AL549_RS00975	PF00440	Bacterial regulatory proteins, tetR family
AL549_RS00975	PF14246	AefR-like transcriptional repressor, C-terminal region
AL549_RS00985	PF01103	Surface antigen
AL549_RS00990	PF13265	AL549_RS00990
AL549_RS00995	PF00375	Sodium:dicarboxylate symporter family
AL549_RS01000	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS01000	PF03466	LysR substrate binding domain
AL549_RS01005	PF00764	Arginosuccinate synthase
AL549_RS01010	PF10014	2OG-Fe dioxygenase
AL549_RS01015	PF00892	EamA-like transporter family
AL549_RS01020	PF14534	Domain of unknown function (DUF4440)
AL549_RS01025	PF01638	HxlR-like helix-turn-helix
AL549_RS01030	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS01030	PF03466	LysR substrate binding domain
AL549_RS01040	PF00027	Cyclic nucleotide-binding domain
AL549_RS01045	PF00313	'Cold-shock' DNA-binding domain
AL549_RS01045	PF06961	AL549_RS01045
AL549_RS01050	PF01048	Phosphorylase superfamily
AL549_RS01055	PF04973	AL549_RS01055
AL549_RS01065	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_RS01065	PF12793	AL549_RS01065
AL549_RS01070	PF07690	Major Facilitator Superfamily
AL549_RS01075	PF04247	AL549_RS01075
AL549_RS01080	PF01752	Collagenase
AL549_RS01080	PF04151	Bacterial pre-peptidase C-terminal domain
AL549_RS01080	PF08453	Peptidase family M9 N-terminal
AL549_RS01085	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS01085	PF03466	LysR substrate binding domain
AL549_RS01090	PF01048	Phosphorylase superfamily
AL549_RS01095	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS01100	PF00703	Glycosyl hydrolases family 2
AL549_RS01105	PF00384	Molybdopterin oxidoreductase
AL549_RS01105	PF01568	Molydopterin dinucleotide binding domain
AL549_RS01105	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL549_RS01105	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_RS01105	PF12838	4Fe-4S dicluster domain
AL549_RS01105	PF13510	2Fe-2S iron-sulfur cluster binding domain
AL549_RS01105	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AL549_RS01115	PF12710	haloacid dehalogenase-like hydrolase
AL549_RS01120	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL549_RS01125	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL549_RS01130	PF00892	EamA-like transporter family
AL549_RS01135	PF00155	Aminotransferase class I and II
AL549_RS01135	PF00392	Bacterial regulatory proteins, gntR family
AL549_RS01145	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL549_RS01145	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL549_RS01145	PF02378	Phosphotransferase system, EIIC
AL549_RS01150	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL549_RS01155	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL549_RS01155	PF00381	PTS HPr component phosphorylation site
AL549_RS01160	PF12833	Helix-turn-helix domain
AL549_RS01165	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL549_RS01165	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL549_RS01165	PF02378	Phosphotransferase system, EIIC
AL549_RS01170	PF01238	Phosphomannose isomerase type I
AL549_RS01185	PF09313	Domain of unknown function (DUF1971)
AL549_RS01190	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_RS01195	PF00258	Flavodoxin
AL549_RS01195	PF00301	Rubredoxin
AL549_RS01195	PF00753	Metallo-beta-lactamase superfamily
AL549_RS01200	PF00158	Sigma-54 interaction domain
AL549_RS01200	PF01590	GAF domain
AL549_RS01220	PF06445	GyrI-like small molecule binding domain
AL549_RS01220	PF12833	Helix-turn-helix domain
AL549_RS01225	PF00593	TonB dependent receptor
AL549_RS01225	PF07715	TonB-dependent Receptor Plug Domain
AL549_RS01230	PF01593	Flavin containing amine oxidoreductase
AL549_RS01235	PF11953	Domain of unknown function (DUF3470)
AL549_RS01235	PF13187	4Fe-4S dicluster domain
AL549_RS01240	PF00588	SpoU rRNA Methylase family
AL549_RS01250	PF13347	MFS/sugar transport protein
AL549_RS01255	PF02065	Melibiase
AL549_RS01255	PF16874	AL549_RS01255
AL549_RS01255	PF16875	AL549_RS01255
AL549_RS01265	PF00703	Glycosyl hydrolases family 2
AL549_RS01265	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
AL549_RS01265	PF02837	Glycosyl hydrolases family 2, sugar binding domain
AL549_RS01265	PF02929	Beta galactosidase small chain
AL549_RS01265	PF16353	AL549_RS01265
AL549_RS01270	PF13407	Periplasmic binding protein domain
AL549_RS01275	PF00005	ABC transporter
AL549_RS01280	PF02653	AL549_RS01280
AL549_RS01285	PF00356	Bacterial regulatory proteins, lacI family
AL549_RS01285	PF13377	Periplasmic binding protein-like domain
AL549_RS01290	PF00440	Bacterial regulatory proteins, tetR family
AL549_RS01300	PF00873	AcrB/AcrD/AcrF family
AL549_RS01305	PF00990	GGDEF domain
AL549_RS01305	PF01590	GAF domain
AL549_RS01310	PF00849	RNA pseudouridylate synthase
AL549_RS01320	PF13289	AL549_RS01320
AL549_RS01330	PF13673	Acetyltransferase (GNAT) domain
AL549_RS01335	PF08681	Protein of unknown function (DUF1778)
AL549_RS01340	PF11168	AL549_RS01340
AL549_RS01345	PF00529	HlyD family secretion protein
AL549_RS01345	PF16576	AL549_RS01345
AL549_RS01355	PF01554	MatE
AL549_RS01360	PF00933	Glycosyl hydrolase family 3 N terminal domain
AL549_RS01360	PF01915	Glycosyl hydrolase family 3 C-terminal domain
AL549_RS01360	PF14310	Fibronectin type III-like domain
AL549_RS01370	PF02311	AraC-like ligand binding domain
AL549_RS01370	PF12833	Helix-turn-helix domain
AL549_RS01375	PF02264	LamB porin
AL549_RS01380	PF00722	Glycosyl hydrolases family 16
AL549_RS01390	PF00356	Bacterial regulatory proteins, lacI family
AL549_RS01390	PF13377	Periplasmic binding protein-like domain
AL549_RS01400	PF00005	ABC transporter
AL549_RS01400	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_RS01405	PF00005	ABC transporter
AL549_RS01405	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_RS01410	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS01415	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS01420	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_RS01425	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS01430	PF00356	Bacterial regulatory proteins, lacI family
AL549_RS01430	PF13377	Periplasmic binding protein-like domain
AL549_RS01435	PF00005	ABC transporter
AL549_RS01440	PF00232	Glycosyl hydrolase family 1
AL549_RS01445	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS01450	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS01455	PF13416	Bacterial extracellular solute-binding protein
AL549_RS01460	PF00356	Bacterial regulatory proteins, lacI family
AL549_RS01460	PF13377	Periplasmic binding protein-like domain
AL549_RS01465	PF02264	LamB porin
AL549_RS01475	PF00174	Oxidoreductase molybdopterin binding domain
AL549_RS01480	PF00990	GGDEF domain
AL549_RS01485	PF00072	Response regulator receiver domain
AL549_RS01485	PF00486	Transcriptional regulatory protein, C terminal
AL549_RS01490	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS01490	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS01490	PF08521	AL549_RS01490
AL549_RS01495	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS01500	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS01500	PF03466	LysR substrate binding domain
AL549_RS01505	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_RS01510	PF00675	Insulinase (Peptidase family M16)
AL549_RS01510	PF05193	Peptidase M16 inactive domain
AL549_RS01515	PF02690	AL549_RS01515
AL549_RS01520	PF01966	HD domain
AL549_RS01525	PF02798	Glutathione S-transferase, N-terminal domain
AL549_RS01525	PF13410	Glutathione S-transferase, C-terminal domain
AL549_RS01530	PF00171	Aldehyde dehydrogenase family
AL549_RS01535	PF00563	EAL domain
AL549_RS01545	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS01545	PF00672	HAMP domain
AL549_RS01550	PF12710	haloacid dehalogenase-like hydrolase
AL549_RS01555	PF13505	Outer membrane protein beta-barrel domain
AL549_RS01560	PF03067	Chitin binding domain
AL549_RS01565	PF01470	Pyroglutamyl peptidase
AL549_RS01575	PF01037	AsnC family
AL549_RS01575	PF13412	Winged helix-turn-helix DNA-binding
AL549_RS01580	PF01810	AL549_RS01580
AL549_RS01585	PF00919	Uncharacterized protein family UPF0004
AL549_RS01585	PF04055	Radical SAM superfamily
AL549_RS01590	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS01595	PF00128	Alpha amylase, catalytic domain
AL549_RS01595	PF02806	Alpha amylase, C-terminal all-beta domain
AL549_RS01595	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL549_RS01600	PF02446	4-alpha-glucanotransferase
AL549_RS01605	PF00343	Carbohydrate phosphorylase
AL549_RS01610	PF00196	Bacterial regulatory proteins, luxR family
AL549_RS01615	PF04018	AL549_RS01615
AL549_RS01625	PF02630	SCO1/SenC
AL549_RS01630	PF04314	Protein of unknown function (DUF461)
AL549_RS01635	PF03193	Protein of unknown function, DUF258
AL549_RS01640	PF00375	Sodium:dicarboxylate symporter family
AL549_RS01645	PF08543	Phosphomethylpyrimidine kinase
AL549_RS01650	PF13520	Amino acid permease
AL549_RS01655	PF01276	Orn/Lys/Arg decarboxylase, major domain
AL549_RS01655	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
AL549_RS01655	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AL549_RS01670	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL549_RS01670	PF03714	Bacterial pullanase-associated domain
AL549_RS01670	PF11852	Domain of unknown function (DUF3372)
AL549_RS01675	PF08238	Sel1 repeat
AL549_RS01680	PF00128	Alpha amylase, catalytic domain
AL549_RS01685	PF13416	Bacterial extracellular solute-binding protein
AL549_RS01690	PF06202	Amylo-alpha-1,6-glucosidase
AL549_RS01695	PF07148	AL549_RS01695
AL549_RS01700	PF02264	LamB porin
AL549_RS01705	PF00128	Alpha amylase, catalytic domain
AL549_RS01705	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL549_RS01710	PF00990	GGDEF domain
AL549_RS01710	PF17201	AL549_RS01710
AL549_RS01715	PF00990	GGDEF domain
AL549_RS01725	PF02678	Pirin
AL549_RS01725	PF05726	Pirin C-terminal cupin domain
AL549_RS01730	PF06865	Protein of unknown function (DUF1255)
AL549_RS01735	PF11012	AL549_RS01735
AL549_RS01740	PF00704	Glycosyl hydrolases family 18
AL549_RS01740	PF02010	AL549_RS01740
AL549_RS01740	PF08329	Chitinase A, N-terminal domain
AL549_RS01745	PF08386	TAP-like protein
AL549_RS01745	PF12146	Putative lysophospholipase
AL549_RS01750	PF00440	Bacterial regulatory proteins, tetR family
AL549_RS01755	PF01757	AL549_RS01755
AL549_RS01760	PF03600	Citrate transporter
AL549_RS01765	PF04994	TfoX C-terminal domain
AL549_RS01770	PF04828	Glutathione-dependent formaldehyde-activating enzyme
AL549_RS01775	PF02588	AL549_RS01775
AL549_RS01780	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AL549_RS01780	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AL549_RS01785	PF02805	Metal binding domain of Ada
AL549_RS01785	PF06029	AlkA N-terminal domain
AL549_RS01785	PF12833	Helix-turn-helix domain
AL549_RS01795	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS01795	PF03466	LysR substrate binding domain
AL549_RS01800	PF04219	AL549_RS01800
AL549_RS01805	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
AL549_RS01805	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
AL549_RS01810	PF05013	N-formylglutamate amidohydrolase
AL549_RS01810	PF08014	AL549_RS01810
AL549_RS01815	PF11280	AL549_RS01815
AL549_RS01820	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AL549_RS01830	PF03616	AL549_RS01830
AL549_RS01835	PF03616	AL549_RS01835
AL549_RS01845	PF14247	AL549_RS01845
AL549_RS01850	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS01850	PF17200	AL549_RS01850
AL549_RS01855	PF00072	Response regulator receiver domain
AL549_RS01855	PF04397	LytTr DNA-binding domain
AL549_RS01860	PF06580	AL549_RS01860
AL549_RS01870	PF17131	AL549_RS01870
AL549_RS01875	PF02687	AL549_RS01875
AL549_RS01875	PF12704	MacB-like periplasmic core domain
AL549_RS01880	PF00005	ABC transporter
AL549_RS01890	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS01890	PF03466	LysR substrate binding domain
AL549_RS01895	PF11391	AL549_RS01895
AL549_RS01900	PF01709	Transcriptional regulator
AL549_RS01905	PF11686	AL549_RS01905
AL549_RS01910	PF00072	Response regulator receiver domain
AL549_RS01910	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS01910	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS01910	PF17149	AL549_RS01910
AL549_RS01915	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS01920	PF01609	Transposase DDE domain
AL549_RS01920	PF13006	AL549_RS01920
AL549_RS01925	PF00925	GTP cyclohydrolase II
AL549_RS01925	PF08719	Domain of unknown function (DUF1768)
AL549_RS01935	PF00005	ABC transporter
AL549_RS01940	PF00005	ABC transporter
AL549_RS01940	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_RS01950	PF11826	AL549_RS01950
AL549_RS01955	PF13614	AAA domain
AL549_RS01960	PF02195	ParB-like nuclease domain
AL549_RS01965	PF05127	Helicase
AL549_RS01965	PF08351	Domain of unknown function (DUF1726)
AL549_RS01965	PF13718	GNAT acetyltransferase 2
AL549_RS01970	PF13466	STAS domain
AL549_RS01975	PF00072	Response regulator receiver domain
AL549_RS01980	PF01584	CheW-like domain
AL549_RS01980	PF01627	Hpt domain
AL549_RS01980	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS01980	PF02895	Signal transducing histidine kinase, homodimeric domain
AL549_RS01985	PF01584	CheW-like domain
AL549_RS01990	PF01584	CheW-like domain
AL549_RS01995	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS01995	PF13188	PAS domain
AL549_RS01995	PF13426	PAS domain
AL549_RS02000	PF01739	CheR methyltransferase, SAM binding domain
AL549_RS02000	PF03705	CheR methyltransferase, all-alpha domain
AL549_RS02005	PF03975	CheD chemotactic sensory transduction
AL549_RS02010	PF00072	Response regulator receiver domain
AL549_RS02010	PF01339	CheB methylesterase
AL549_RS02015	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS02020	PF01740	STAS domain
AL549_RS02025	PF00072	Response regulator receiver domain
AL549_RS02025	PF07228	Stage II sporulation protein E (SpoIIE)
AL549_RS02025	PF13581	Histidine kinase-like ATPase domain
AL549_RS02030	PF03961	AL549_RS02030
AL549_RS02035	PF12796	Ankyrin repeats (3 copies)
AL549_RS02040	PF13353	4Fe-4S single cluster domain
AL549_RS02045	PF02223	Thymidylate kinase
AL549_RS02050	PF07308	AL549_RS02050
AL549_RS02055	PF06674	AL549_RS02055
AL549_RS02060	PF01039	Carboxyl transferase domain
AL549_RS02065	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS02065	PF03466	LysR substrate binding domain
AL549_RS02070	PF01752	Collagenase
AL549_RS02070	PF04151	Bacterial pre-peptidase C-terminal domain
AL549_RS02070	PF08453	Peptidase family M9 N-terminal
AL549_RS02075	PF00300	Histidine phosphatase superfamily (branch 1)
AL549_RS02080	PF00563	EAL domain
AL549_RS02090	PF00367	phosphotransferase system, EIIB
AL549_RS02090	PF02378	Phosphotransferase system, EIIC
AL549_RS02095	PF13580	SIS domain
AL549_RS02105	PF01380	SIS domain
AL549_RS02105	PF01418	Helix-turn-helix domain, rpiR family
AL549_RS02110	PF01189	NOL1/NOP2/sun family
AL549_RS02115	PF02698	DUF218 domain
AL549_RS02120	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_RS02120	PF12464	Maltose acetyltransferase
AL549_RS02125	PF00166	Chaperonin 10 Kd subunit
AL549_RS02130	PF00118	TCP-1/cpn60 chaperonin family
AL549_RS02140	PF03358	NADPH-dependent FMN reductase
AL549_RS02145	PF00005	ABC transporter
AL549_RS02145	PF00664	ABC transporter transmembrane region
AL549_RS02150	PF00563	EAL domain
AL549_RS02150	PF00990	GGDEF domain
AL549_RS02150	PF16448	AL549_RS02150
AL549_RS02155	PF06035	Bacterial transglutaminase-like cysteine proteinase BTLCP
AL549_RS02160	PF13437	HlyD family secretion protein
AL549_RS02160	PF13533	Biotin-lipoyl like
AL549_RS02165	PF00072	Response regulator receiver domain
AL549_RS02165	PF02954	Bacterial regulatory protein, Fis family
AL549_RS02165	PF14532	Sigma-54 interaction domain
AL549_RS02170	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS02170	PF02743	Cache domain
AL549_RS02175	PF01243	Pyridoxamine 5'-phosphate oxidase
AL549_RS02175	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
AL549_RS02180	PF00196	Bacterial regulatory proteins, luxR family
AL549_RS02180	PF08448	PAS fold
AL549_RS02185	PF12833	Helix-turn-helix domain
AL549_RS02190	PF00171	Aldehyde dehydrogenase family
AL549_RS02190	PF01619	Proline dehydrogenase
AL549_RS02190	PF14850	DNA-binding domain of Proline dehydrogenase
AL549_RS02200	PF00474	Sodium:solute symporter family
AL549_RS02210	PF01037	AsnC family
AL549_RS02210	PF13412	Winged helix-turn-helix DNA-binding
AL549_RS02215	PF04286	AL549_RS02215
AL549_RS02220	PF02278	Polysaccharide lyase family 8, super-sandwich domain
AL549_RS02220	PF02884	Polysaccharide lyase family 8, C-terminal beta-sandwich domain
AL549_RS02220	PF08124	Polysaccharide lyase family 8, N terminal alpha-helical domain
AL549_RS02225	PF00884	Sulfatase
AL549_RS02225	PF16385	AL549_RS02225
AL549_RS02230	PF00884	Sulfatase
AL549_RS02235	PF04055	Radical SAM superfamily
AL549_RS02235	PF13186	Iron-sulfur cluster-binding domain
AL549_RS02240	PF00884	Sulfatase
AL549_RS02240	PF16347	AL549_RS02240
AL549_RS02245	PF10022	AL549_RS02245
AL549_RS02250	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_RS02260	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS02265	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS02265	PF12911	AL549_RS02265
AL549_RS02270	PF00005	ABC transporter
AL549_RS02270	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_RS02275	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS02280	PF04982	AL549_RS02280
AL549_RS02285	PF03573	outer membrane porin, OprD family
AL549_RS02290	PF00916	AL549_RS02290
AL549_RS02295	PF16363	AL549_RS02295
AL549_RS02300	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
AL549_RS02300	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
AL549_RS02305	PF13561	Enoyl-(Acyl carrier protein) reductase
AL549_RS02310	PF07470	Glycosyl Hydrolase Family 88
AL549_RS02315	PF09508	Lacto-N-biose phosphorylase
AL549_RS02315	PF17385	AL549_RS02315
AL549_RS02315	PF17386	AL549_RS02315
AL549_RS02320	PF02278	Polysaccharide lyase family 8, super-sandwich domain
AL549_RS02320	PF08124	Polysaccharide lyase family 8, N terminal alpha-helical domain
AL549_RS02325	PF00005	ABC transporter
AL549_RS02325	PF00664	ABC transporter transmembrane region
AL549_RS02330	PF02274	Amidinotransferase
AL549_RS02340	PF01261	Xylose isomerase-like TIM barrel
AL549_RS02345	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL549_RS02350	PF08282	haloacid dehalogenase-like hydrolase
AL549_RS02355	PF00596	Class II Aldolase and Adducin N-terminal domain
AL549_RS02360	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL549_RS02365	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL549_RS02365	PF03611	AL549_RS02365
AL549_RS02370	PF00455	AL549_RS02370
AL549_RS02370	PF08220	DeoR-like helix-turn-helix domain
AL549_RS02375	PF13483	Beta-lactamase superfamily domain
AL549_RS02380	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL549_RS02385	PF04399	Glutaredoxin 2, C terminal domain
AL549_RS02385	PF13417	Glutathione S-transferase, N-terminal domain
AL549_RS02390	PF13561	Enoyl-(Acyl carrier protein) reductase
AL549_RS02395	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS02395	PF03466	LysR substrate binding domain
AL549_RS02400	PF10688	AL549_RS02400
AL549_RS02405	PF01081	KDPG and KHG aldolase
AL549_RS02410	PF00294	pfkB family carbohydrate kinase
AL549_RS02415	PF02614	Glucuronate isomerase
AL549_RS02420	PF01232	Mannitol dehydrogenase Rossmann domain
AL549_RS02420	PF08125	Mannitol dehydrogenase C-terminal domain
AL549_RS02425	PF06808	AL549_RS02425
AL549_RS02430	PF04290	AL549_RS02430
AL549_RS02435	PF03480	Bacterial extracellular solute-binding protein, family 7
AL549_RS02440	PF00392	Bacterial regulatory proteins, gntR family
AL549_RS02440	PF07729	FCD domain
AL549_RS02445	PF03786	D-mannonate dehydratase (UxuA)
AL549_RS02450	PF00270	DEAD/DEAH box helicase
AL549_RS02450	PF00271	Helicase conserved C-terminal domain
AL549_RS02455	PF00155	Aminotransferase class I and II
AL549_RS02460	PF03553	AL549_RS02460
AL549_RS02465	PF00356	Bacterial regulatory proteins, lacI family
AL549_RS02465	PF13377	Periplasmic binding protein-like domain
AL549_RS02470	PF00857	Isochorismatase family
AL549_RS02475	PF01276	Orn/Lys/Arg decarboxylase, major domain
AL549_RS02480	PF00501	AMP-binding enzyme
AL549_RS02480	PF00892	EamA-like transporter family
AL549_RS02485	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS02485	PF03466	LysR substrate binding domain
AL549_RS02490	PF03473	MOSC domain
AL549_RS02490	PF03475	3-alpha domain
AL549_RS02500	PF12833	Helix-turn-helix domain
AL549_RS02505	PF08240	Alcohol dehydrogenase GroES-like domain
AL549_RS02510	PF02056	Family 4 glycosyl hydrolase
AL549_RS02510	PF11975	Family 4 glycosyl hydrolase C-terminal domain
AL549_RS02515	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS02515	PF03466	LysR substrate binding domain
AL549_RS02530	PF12833	Helix-turn-helix domain
AL549_RS02530	PF12852	Cupin
AL549_RS02535	PF00462	Glutaredoxin
AL549_RS02540	PF04224	AL549_RS02540
AL549_RS02550	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS02550	PF12729	AL549_RS02550
AL549_RS02555	PF01547	Bacterial extracellular solute-binding protein
AL549_RS02560	PF11212	AL549_RS02560
AL549_RS02565	PF11730	AL549_RS02565
AL549_RS02570	PF01625	Peptide methionine sulfoxide reductase
AL549_RS02575	PF01641	SelR domain
AL549_RS02580	PF08238	Sel1 repeat
AL549_RS02585	PF06055	AL549_RS02585
AL549_RS02590	PF01872	RibD C-terminal domain
AL549_RS02595	PF13508	Acetyltransferase (GNAT) domain
AL549_RS02600	PF00753	Metallo-beta-lactamase superfamily
AL549_RS02600	PF14863	Alkyl sulfatase dimerisation
AL549_RS02600	PF14864	Alkyl sulfatase C-terminal
AL549_RS02605	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS02605	PF03466	LysR substrate binding domain
AL549_RS02610	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AL549_RS02610	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL549_RS02615	PF12833	Helix-turn-helix domain
AL549_RS02620	PF00892	EamA-like transporter family
AL549_RS02625	PF00455	AL549_RS02625
AL549_RS02625	PF08220	DeoR-like helix-turn-helix domain
AL549_RS02635	PF00455	AL549_RS02635
AL549_RS02635	PF08220	DeoR-like helix-turn-helix domain
AL549_RS02640	PF08013	Tagatose 6 phosphate kinase
AL549_RS02645	PF01380	SIS domain
AL549_RS02650	PF03830	PTS system sorbose subfamily IIB component
AL549_RS02655	PF03609	AL549_RS02655
AL549_RS02660	PF03613	AL549_RS02660
AL549_RS02665	PF03610	PTS system fructose IIA component
AL549_RS02670	PF01979	Amidohydrolase family
AL549_RS02675	PF01116	Fructose-bisphosphate aldolase class-II
AL549_RS02680	PF00005	ABC transporter
AL549_RS02680	PF12848	ABC transporter
AL549_RS02685	PF00593	TonB dependent receptor
AL549_RS02685	PF07715	TonB-dependent Receptor Plug Domain
AL549_RS02690	PF00392	Bacterial regulatory proteins, gntR family
AL549_RS02690	PF07729	FCD domain
AL549_RS02695	PF01032	FecCD transport family
AL549_RS02700	PF01497	Periplasmic binding protein
AL549_RS02705	PF00005	ABC transporter
AL549_RS02710	PF11575	AL549_RS02710
AL549_RS02720	PF16576	AL549_RS02720
AL549_RS02725	PF02321	Outer membrane efflux protein
AL549_RS02730	PF02687	AL549_RS02730
AL549_RS02730	PF12704	MacB-like periplasmic core domain
AL549_RS02735	PF02687	AL549_RS02735
AL549_RS02735	PF12704	MacB-like periplasmic core domain
AL549_RS02740	PF00005	ABC transporter
AL549_RS02745	PF00929	Exonuclease
AL549_RS02750	PF07690	Major Facilitator Superfamily
AL549_RS02760	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
AL549_RS02765	PF00990	GGDEF domain
AL549_RS02770	PF01389	OmpA-like transmembrane domain
AL549_RS02775	PF08908	AL549_RS02775
AL549_RS02780	PF01717	Cobalamin-independent synthase, Catalytic domain
AL549_RS02785	PF11168	AL549_RS02785
AL549_RS02785	PF13515	AL549_RS02785
AL549_RS02790	PF13437	HlyD family secretion protein
AL549_RS02790	PF13533	Biotin-lipoyl like
AL549_RS02795	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS02795	PF03466	LysR substrate binding domain
AL549_RS02800	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS02800	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS02805	PF00072	Response regulator receiver domain
AL549_RS02805	PF00486	Transcriptional regulatory protein, C terminal
AL549_RS02810	PF11777	AL549_RS02810
AL549_RS02815	PF00753	Metallo-beta-lactamase superfamily
AL549_RS02815	PF14863	Alkyl sulfatase dimerisation
AL549_RS02815	PF14864	Alkyl sulfatase C-terminal
AL549_RS02825	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS02825	PF13426	PAS domain
AL549_RS02830	PF00072	Response regulator receiver domain
AL549_RS02830	PF00158	Sigma-54 interaction domain
AL549_RS02830	PF02954	Bacterial regulatory protein, Fis family
AL549_RS02835	PF16868	AL549_RS02835
AL549_RS02840	PF06808	AL549_RS02840
AL549_RS02845	PF01266	FAD dependent oxidoreductase
AL549_RS02850	PF11777	AL549_RS02850
AL549_RS02855	PF00072	Response regulator receiver domain
AL549_RS02855	PF13487	HD domain
AL549_RS02860	PF00072	Response regulator receiver domain
AL549_RS02860	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS02860	PF00989	PAS fold
AL549_RS02860	PF01627	Hpt domain
AL549_RS02860	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS02865	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS02870	PF07883	Cupin domain
AL549_RS02875	PF00805	Pentapeptide repeats (8 copies)
AL549_RS02875	PF13599	Pentapeptide repeats (9 copies)
AL549_RS02880	PF07073	Modulator of Rho-dependent transcription termination (ROF)
AL549_RS02885	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL549_RS02885	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL549_RS02890	PF01447	Thermolysin metallopeptidase, catalytic domain
AL549_RS02890	PF02868	Thermolysin metallopeptidase, alpha-helical domain
AL549_RS02890	PF03413	Peptidase propeptide and YPEB domain
AL549_RS02890	PF04151	Bacterial pre-peptidase C-terminal domain
AL549_RS02890	PF07504	Fungalysin/Thermolysin Propeptide Motif
AL549_RS02895	PF06041	Bacterial protein of unknown function (DUF924)
AL549_RS02900	PF01841	Transglutaminase-like superfamily
AL549_RS02910	PF12697	Alpha/beta hydrolase family
AL549_RS02920	PF00270	DEAD/DEAH box helicase
AL549_RS02920	PF00271	Helicase conserved C-terminal domain
AL549_RS02925	PF00561	alpha/beta hydrolase fold
AL549_RS02930	PF00881	Nitroreductase family
AL549_RS02935	PF03992	Antibiotic biosynthesis monooxygenase
AL549_RS02940	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS02940	PF03466	LysR substrate binding domain
AL549_RS02945	PF13279	Thioesterase-like superfamily
AL549_RS02950	PF00175	Oxidoreductase NAD-binding domain
AL549_RS02950	PF00970	Oxidoreductase FAD-binding domain
AL549_RS02955	PF00892	EamA-like transporter family
AL549_RS02960	PF09829	AL549_RS02960
AL549_RS02965	PF10973	AL549_RS02965
AL549_RS02970	PF00892	EamA-like transporter family
AL549_RS02975	PF01757	AL549_RS02975
AL549_RS02980	PF07690	Major Facilitator Superfamily
AL549_RS02985	PF02311	AraC-like ligand binding domain
AL549_RS02985	PF12833	Helix-turn-helix domain
AL549_RS03000	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS03000	PF03466	LysR substrate binding domain
AL549_RS03005	PF07519	Tannase and feruloyl esterase
AL549_RS03015	PF06942	AL549_RS03015
AL549_RS03020	PF00034	Cytochrome c
AL549_RS03020	PF03150	Di-haem cytochrome c peroxidase
AL549_RS03030	PF02001	AL549_RS03030
AL549_RS03035	PF02579	Dinitrogenase iron-molybdenum cofactor
AL549_RS03040	PF04400	AL549_RS03040
AL549_RS03045	PF00009	Elongation factor Tu GTP binding domain
AL549_RS03045	PF00679	Elongation factor G C-terminus
AL549_RS03045	PF03764	Elongation factor G, domain IV
AL549_RS03045	PF14492	Elongation Factor G, domain II
AL549_RS03055	PF00583	Acetyltransferase (GNAT) family
AL549_RS03060	PF00990	GGDEF domain
AL549_RS03065	PF13458	Periplasmic binding protein
AL549_RS03070	PF13416	Bacterial extracellular solute-binding protein
AL549_RS03075	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS03080	PF00072	Response regulator receiver domain
AL549_RS03080	PF00486	Transcriptional regulatory protein, C terminal
AL549_RS03085	PF00367	phosphotransferase system, EIIB
AL549_RS03085	PF02378	Phosphotransferase system, EIIC
AL549_RS03090	PF07690	Major Facilitator Superfamily
AL549_RS03095	PF13411	MerR HTH family regulatory protein
AL549_RS03100	PF04244	Deoxyribodipyrimidine photo-lyase-related protein
AL549_RS03105	PF12833	Helix-turn-helix domain
AL549_RS03110	PF01161	Phosphatidylethanolamine-binding protein
AL549_RS03115	PF00293	NUDIX domain
AL549_RS03120	PF00072	Response regulator receiver domain
AL549_RS03120	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS03120	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS03125	PF00174	Oxidoreductase molybdopterin binding domain
AL549_RS03135	PF16576	AL549_RS03135
AL549_RS03140	PF00873	AcrB/AcrD/AcrF family
AL549_RS03150	PF00924	Mechanosensitive ion channel
AL549_RS03155	PF00583	Acetyltransferase (GNAT) family
AL549_RS03160	PF13449	Esterase-like activity of phytase
AL549_RS03165	PF00924	Mechanosensitive ion channel
AL549_RS03170	PF00583	Acetyltransferase (GNAT) family
AL549_RS03170	PF00795	Carbon-nitrogen hydrolase
AL549_RS03175	PF10000	ACT domain
AL549_RS03175	PF13840	ACT domain
AL549_RS03180	PF11840	AL549_RS03180
AL549_RS03185	PF00929	Exonuclease
AL549_RS03190	PF00571	CBS domain
AL549_RS03190	PF03445	AL549_RS03190
AL549_RS03190	PF10335	AL549_RS03190
AL549_RS03195	PF01614	Bacterial transcriptional regulator
AL549_RS03195	PF09339	IclR helix-turn-helix domain
AL549_RS03200	PF13561	Enoyl-(Acyl carrier protein) reductase
AL549_RS03205	PF10688	AL549_RS03205
AL549_RS03210	PF07883	Cupin domain
AL549_RS03215	PF02502	Ribose/Galactose Isomerase
AL549_RS03215	PF12408	Ribose-5-phosphate isomerase
AL549_RS03230	PF00892	EamA-like transporter family
AL549_RS03235	PF00294	pfkB family carbohydrate kinase
AL549_RS03240	PF01081	KDPG and KHG aldolase
AL549_RS03245	PF00754	F5/8 type C domain
AL549_RS03250	PF06917	Periplasmic pectate lyase
AL549_RS03255	PF00474	Sodium:solute symporter family
AL549_RS03260	PF06178	Oligogalacturonate-specific porin protein (KdgM)
AL549_RS03270	PF00474	Sodium:solute symporter family
AL549_RS03275	PF14583	Oligogalacturonate lyase
AL549_RS03280	PF00128	Alpha amylase, catalytic domain
AL549_RS03285	PF03625	Domain of unknown function DUF302
AL549_RS03290	PF07670	Nucleoside recognition
AL549_RS03295	PF07670	Nucleoside recognition
AL549_RS03300	PF01546	Peptidase family M20/M25/M40
AL549_RS03300	PF07687	Peptidase dimerisation domain
AL549_RS03310	PF06863	Protein of unknown function (DUF1254)
AL549_RS03320	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS03320	PF03466	LysR substrate binding domain
AL549_RS03325	PF06742	Protein of unknown function (DUF1214)
AL549_RS03325	PF06863	Protein of unknown function (DUF1254)
AL549_RS03330	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS03335	PF01022	Bacterial regulatory protein, arsR family
AL549_RS03340	PF01758	Sodium Bile acid symporter family
AL549_RS03345	PF01230	HIT domain
AL549_RS03350	PF13670	AL549_RS03350
AL549_RS03355	PF01292	Prokaryotic cytochrome b561
AL549_RS03360	PF00884	Sulfatase
AL549_RS03360	PF08019	AL549_RS03360
AL549_RS03365	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS03365	PF03466	LysR substrate binding domain
AL549_RS03370	PF12688	Tetratrico peptide repeat
AL549_RS03375	PF00753	Metallo-beta-lactamase superfamily
AL549_RS03375	PF14863	Alkyl sulfatase dimerisation
AL549_RS03375	PF14864	Alkyl sulfatase C-terminal
AL549_RS03385	PF16576	AL549_RS03385
AL549_RS03390	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS03395	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL549_RS03400	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL549_RS03400	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AL549_RS03405	PF00579	tRNA synthetases class I (W and Y)
AL549_RS03405	PF01479	S4 domain
AL549_RS03410	PF00196	Bacterial regulatory proteins, luxR family
AL549_RS03415	PF02567	Phenazine biosynthesis-like protein
AL549_RS03420	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS03420	PF03466	LysR substrate binding domain
AL549_RS03425	PF02798	Glutathione S-transferase, N-terminal domain
AL549_RS03430	PF13407	Periplasmic binding protein domain
AL549_RS03435	PF00990	GGDEF domain
AL549_RS03435	PF08447	PAS fold
AL549_RS03435	PF13426	PAS domain
AL549_RS03440	PF00158	Sigma-54 interaction domain
AL549_RS03440	PF01590	GAF domain
AL549_RS03440	PF02954	Bacterial regulatory protein, Fis family
AL549_RS03445	PF00171	Aldehyde dehydrogenase family
AL549_RS03450	PF00583	Acetyltransferase (GNAT) family
AL549_RS03455	PF01595	AL549_RS03455
AL549_RS03455	PF03471	Transporter associated domain
AL549_RS03460	PF10462	Peptidase M66
AL549_RS03460	PF12561	AL549_RS03460
AL549_RS03465	PF01327	Polypeptide deformylase
AL549_RS03470	PF03611	AL549_RS03470
AL549_RS03475	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL549_RS03480	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL549_RS03485	PF00356	Bacterial regulatory proteins, lacI family
AL549_RS03485	PF13377	Periplasmic binding protein-like domain
AL549_RS03490	PF00175	Oxidoreductase NAD-binding domain
AL549_RS03490	PF01794	AL549_RS03490
AL549_RS03490	PF08022	AL549_RS03490
AL549_RS03505	PF00005	ABC transporter
AL549_RS03510	PF03222	Tryptophan/tyrosine permease family
AL549_RS03515	PF01212	Beta-eliminating lyase
AL549_RS03530	PF00873	AcrB/AcrD/AcrF family
AL549_RS03535	PF11604	Copper binding periplasmic protein CusF
AL549_RS03535	PF16576	AL549_RS03535
AL549_RS03540	PF02321	Outer membrane efflux protein
AL549_RS03550	PF00753	Metallo-beta-lactamase superfamily
AL549_RS03555	PF05618	Putative ATP-dependant zinc protease
AL549_RS03560	PF08443	RimK-like ATP-grasp domain
AL549_RS03570	PF00668	Condensation domain
AL549_RS03575	PF00593	TonB dependent receptor
AL549_RS03575	PF07715	TonB-dependent Receptor Plug Domain
AL549_RS03580	PF01497	Periplasmic binding protein
AL549_RS03585	PF00550	Phosphopantetheine attachment site
AL549_RS03590	PF00501	AMP-binding enzyme
AL549_RS03590	PF13193	AMP-binding enzyme C-terminal domain
AL549_RS03595	PF01817	Chorismate mutase type II
AL549_RS03600	PF00550	Phosphopantetheine attachment site
AL549_RS03600	PF00857	Isochorismatase family
AL549_RS03605	PF04954	Siderophore-interacting protein
AL549_RS03605	PF08021	Siderophore-interacting FAD-binding domain
AL549_RS03610	PF00501	AMP-binding enzyme
AL549_RS03610	PF13193	AMP-binding enzyme C-terminal domain
AL549_RS03615	PF00425	chorismate binding enzyme
AL549_RS03620	PF13561	Enoyl-(Acyl carrier protein) reductase
AL549_RS03625	PF00793	DAHP synthetase I family
AL549_RS03630	PF00501	AMP-binding enzyme
AL549_RS03630	PF00668	Condensation domain
AL549_RS03630	PF13193	AMP-binding enzyme C-terminal domain
AL549_RS03635	PF00550	Phosphopantetheine attachment site
AL549_RS03635	PF00668	Condensation domain
AL549_RS03640	PF01648	4'-phosphopantetheinyl transferase superfamily
AL549_RS03645	PF04320	AL549_RS03645
AL549_RS03650	PF05787	Bacterial protein of unknown function (DUF839)
AL549_RS03655	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS03660	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS03665	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS03670	PF13472	GDSL-like Lipase/Acylhydrolase family
AL549_RS03675	PF00563	EAL domain
AL549_RS03680	PF14600	Cellulose-binding domain
AL549_RS03685	PF01243	Pyridoxamine 5'-phosphate oxidase
AL549_RS03690	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS03695	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS03700	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS03705	PF00005	ABC transporter
AL549_RS03710	PF04170	NlpE N-terminal domain
AL549_RS03715	PF10517	AL549_RS03715
AL549_RS03720	PF00924	Mechanosensitive ion channel
AL549_RS03725	PF00563	EAL domain
AL549_RS03725	PF02378	Phosphotransferase system, EIIC
AL549_RS03730	PF01663	Type I phosphodiesterase / nucleotide pyrophosphatase
AL549_RS03735	PF00753	Metallo-beta-lactamase superfamily
AL549_RS03755	PF13505	Outer membrane protein beta-barrel domain
AL549_RS03760	PF07819	PGAP1-like protein
AL549_RS03765	PF01553	Acyltransferase
AL549_RS03765	PF07690	Major Facilitator Superfamily
AL549_RS03770	PF08487	AL549_RS03770
AL549_RS03770	PF13768	von Willebrand factor type A domain
AL549_RS03775	PF13443	Cro/C1-type HTH DNA-binding domain
AL549_RS03780	PF01565	FAD binding domain
AL549_RS03780	PF02754	AL549_RS03780
AL549_RS03780	PF02913	FAD linked oxidases, C-terminal domain
AL549_RS03780	PF13183	4Fe-4S dicluster domain
AL549_RS03785	PF02589	Uncharacterised ACR, YkgG family COG1556
AL549_RS03790	PF02589	Uncharacterised ACR, YkgG family COG1556
AL549_RS03790	PF11870	AL549_RS03790
AL549_RS03790	PF13183	4Fe-4S dicluster domain
AL549_RS03795	PF02754	AL549_RS03795
AL549_RS03800	PF02652	AL549_RS03800
AL549_RS03805	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS03805	PF03466	LysR substrate binding domain
AL549_RS03810	PF00326	Prolyl oligopeptidase family
AL549_RS03810	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
AL549_RS03815	PF00005	ABC transporter
AL549_RS03815	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_RS03825	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL549_RS03825	PF13654	AAA domain
AL549_RS03830	PF07969	Amidohydrolase family
AL549_RS03835	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
AL549_RS03840	PF06445	GyrI-like small molecule binding domain
AL549_RS03840	PF12833	Helix-turn-helix domain
AL549_RS03845	PF01769	Divalent cation transporter
AL549_RS03845	PF03448	MgtE intracellular N domain
AL549_RS03850	PF13533	Biotin-lipoyl like
AL549_RS03850	PF16576	AL549_RS03850
AL549_RS03860	PF12625	AL549_RS03860
AL549_RS03860	PF12833	Helix-turn-helix domain
AL549_RS03870	PF00072	Response regulator receiver domain
AL549_RS03870	PF00486	Transcriptional regulatory protein, C terminal
AL549_RS03875	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS03875	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS03880	PF12900	Pyridoxamine 5'-phosphate oxidase
AL549_RS03885	PF00155	Aminotransferase class I and II
AL549_RS03885	PF00392	Bacterial regulatory proteins, gntR family
AL549_RS03890	PF13230	Glutamine amidotransferases class-II
AL549_RS03895	PF13520	Amino acid permease
AL549_RS03905	PF01037	AsnC family
AL549_RS03905	PF13404	AsnC-type helix-turn-helix domain
AL549_RS03910	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS03910	PF03466	LysR substrate binding domain
AL549_RS03915	PF01810	AL549_RS03915
AL549_RS03920	PF08534	Redoxin
AL549_RS03925	PF00709	Adenylosuccinate synthetase
AL549_RS03930	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS03930	PF03466	LysR substrate binding domain
AL549_RS03940	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL549_RS03940	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL549_RS03955	PF00072	Response regulator receiver domain
AL549_RS03955	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS03955	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS03960	PF01554	MatE
AL549_RS03965	PF04363	AL549_RS03965
AL549_RS03975	PF04337	Protein of unknown function, DUF480
AL549_RS03980	PF01541	GIY-YIG catalytic domain
AL549_RS03985	PF13729	AL549_RS03985
AL549_RS03990	PF13407	Periplasmic binding protein domain
AL549_RS03995	PF00072	Response regulator receiver domain
AL549_RS03995	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS03995	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS03995	PF09308	LuxQ, periplasmic
AL549_RS04000	PF07238	PilZ domain
AL549_RS04000	PF12945	Flagellar protein YcgR
AL549_RS04005	PF00892	EamA-like transporter family
AL549_RS04010	PF01037	AsnC family
AL549_RS04010	PF13412	Winged helix-turn-helix DNA-binding
AL549_RS04040	PF02355	Protein export membrane protein
AL549_RS04040	PF07549	SecD/SecF GG Motif
AL549_RS04040	PF13721	SecD export protein N-terminal TM region
AL549_RS04045	PF02355	Protein export membrane protein
AL549_RS04045	PF07549	SecD/SecF GG Motif
AL549_RS04050	PF13561	Enoyl-(Acyl carrier protein) reductase
AL549_RS04055	PF00108	Thiolase, N-terminal domain
AL549_RS04055	PF02803	Thiolase, C-terminal domain
AL549_RS04060	PF09361	AL549_RS04060
AL549_RS04065	PF07167	AL549_RS04065
AL549_RS04070	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_RS04070	PF12793	AL549_RS04070
AL549_RS04075	PF01979	Amidohydrolase family
AL549_RS04080	PF00480	ROK family
AL549_RS04085	PF04131	Putative N-acetylmannosamine-6-phosphate epimerase
AL549_RS04090	PF03480	Bacterial extracellular solute-binding protein, family 7
AL549_RS04095	PF04290	AL549_RS04095
AL549_RS04100	PF06808	AL549_RS04100
AL549_RS04105	PF00701	Dihydrodipicolinate synthetase family
AL549_RS04110	PF01380	SIS domain
AL549_RS04110	PF01418	Helix-turn-helix domain, rpiR family
AL549_RS04115	PF01344	Kelch motif
AL549_RS04125	PF09574	AL549_RS04125
AL549_RS04130	PF03264	NapC/NirT cytochrome c family, N-terminal region
AL549_RS04135	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
AL549_RS04140	PF00384	Molybdopterin oxidoreductase
AL549_RS04140	PF01568	Molydopterin dinucleotide binding domain
AL549_RS04140	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL549_RS04145	PF03927	NapD protein
AL549_RS04150	PF12838	4Fe-4S dicluster domain
AL549_RS04155	PF00672	HAMP domain
AL549_RS04155	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS04155	PF07730	Histidine kinase
AL549_RS04155	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
AL549_RS04160	PF00072	Response regulator receiver domain
AL549_RS04160	PF00196	Bacterial regulatory proteins, luxR family
AL549_RS04170	PF00072	Response regulator receiver domain
AL549_RS04175	PF00989	PAS fold
AL549_RS04180	PF01256	Carbohydrate kinase
AL549_RS04180	PF03853	YjeF-related protein N-terminus
AL549_RS04185	PF13505	Outer membrane protein beta-barrel domain
AL549_RS04190	PF00478	IMP dehydrogenase / GMP reductase domain
AL549_RS04195	PF13280	AL549_RS04195
AL549_RS04205	PF05099	Tellurite resistance protein TerB
AL549_RS04220	PF00520	Ion transport protein
AL549_RS04235	PF00588	SpoU rRNA Methylase family
AL549_RS04240	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL549_RS04240	PF14760	Rnk N-terminus
AL549_RS04245	PF00583	Acetyltransferase (GNAT) family
AL549_RS04255	PF03372	Endonuclease/Exonuclease/phosphatase family
AL549_RS04260	PF13302	Acetyltransferase (GNAT) domain
AL549_RS04270	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_RS04275	PF12614	AL549_RS04275
AL549_RS04280	PF00270	DEAD/DEAH box helicase
AL549_RS04280	PF00271	Helicase conserved C-terminal domain
AL549_RS04285	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_RS04290	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_RS04295	PF01047	MarR family
AL549_RS04300	PF01545	Cation efflux family
AL549_RS04310	PF12706	Beta-lactamase superfamily domain
AL549_RS04315	PF00440	Bacterial regulatory proteins, tetR family
AL549_RS04315	PF14246	AefR-like transcriptional repressor, C-terminal region
AL549_RS04320	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL549_RS04325	PF12698	ABC-2 family transporter protein
AL549_RS04330	PF00005	ABC transporter
AL549_RS04335	PF13437	HlyD family secretion protein
AL549_RS04335	PF13533	Biotin-lipoyl like
AL549_RS04340	PF01380	SIS domain
AL549_RS04340	PF01418	Helix-turn-helix domain, rpiR family
AL549_RS04345	PF01168	Alanine racemase, N-terminal domain
AL549_RS04345	PF14031	Putative serine dehydratase domain
AL549_RS04350	PF07969	Amidohydrolase family
AL549_RS04355	PF01042	Endoribonuclease L-PSP
AL549_RS04360	PF00474	Sodium:solute symporter family
AL549_RS04365	PF00728	Glycosyl hydrolase family 20, catalytic domain
AL549_RS04365	PF02838	Glycosyl hydrolase family 20, domain 2
AL549_RS04370	PF10282	Lactonase, 7-bladed beta-propeller
AL549_RS04375	PF01042	Endoribonuclease L-PSP
AL549_RS04380	PF00563	EAL domain
AL549_RS04380	PF00990	GGDEF domain
AL549_RS04385	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS04385	PF03466	LysR substrate binding domain
AL549_RS04390	PF07690	Major Facilitator Superfamily
AL549_RS04400	PF00462	Glutaredoxin
AL549_RS04405	PF00892	EamA-like transporter family
AL549_RS04410	PF00563	EAL domain
AL549_RS04410	PF00990	GGDEF domain
AL549_RS04415	PF13609	Gram-negative porin
AL549_RS04420	PF00578	AhpC/TSA family
AL549_RS04430	PF02566	OsmC-like protein
AL549_RS04435	PF01047	MarR family
AL549_RS04440	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL549_RS04445	PF05437	AL549_RS04445
AL549_RS04450	PF03591	AL549_RS04450
AL549_RS04455	PF02311	AraC-like ligand binding domain
AL549_RS04455	PF12833	Helix-turn-helix domain
AL549_RS04460	PF01810	AL549_RS04460
AL549_RS04465	PF13673	Acetyltransferase (GNAT) domain
AL549_RS04470	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL549_RS04470	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL549_RS04470	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL549_RS04470	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL549_RS04475	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
AL549_RS04475	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
AL549_RS04475	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL549_RS04480	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AL549_RS04485	PF04442	Cytochrome c oxidase assembly protein CtaG/Cox11
AL549_RS04490	PF00510	Cytochrome c oxidase subunit III
AL549_RS04495	PF11137	AL549_RS04495
AL549_RS04500	PF02104	AL549_RS04500
AL549_RS04510	PF02628	AL549_RS04510
AL549_RS04515	PF01040	UbiA prenyltransferase family
AL549_RS04520	PF00691	OmpA family
AL549_RS04520	PF01389	OmpA-like transmembrane domain
AL549_RS04525	PF00793	DAHP synthetase I family
AL549_RS04530	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS04530	PF08447	PAS fold
AL549_RS04535	PF00563	EAL domain
AL549_RS04535	PF00672	HAMP domain
AL549_RS04535	PF00990	GGDEF domain
AL549_RS04535	PF14827	Sensory domain of two-component sensor kinase
AL549_RS04545	PF00456	Transketolase, thiamine diphosphate binding domain
AL549_RS04545	PF02779	Transketolase, pyrimidine binding domain
AL549_RS04545	PF02780	Transketolase, C-terminal domain
AL549_RS04550	PF00923	Transaldolase
AL549_RS04555	PF04198	Putative sugar-binding domain
AL549_RS04560	PF00704	Glycosyl hydrolases family 18
AL549_RS04565	PF00563	EAL domain
AL549_RS04565	PF00990	GGDEF domain
AL549_RS04570	PF00581	Rhodanese-like domain
AL549_RS04580	PF00899	ThiF family
AL549_RS04585	PF00994	Probable molybdopterin binding domain
AL549_RS04585	PF03453	MoeA N-terminal region (domain I and II)
AL549_RS04585	PF03454	MoeA C-terminal region (domain IV)
AL549_RS04590	PF01227	GTP cyclohydrolase I
AL549_RS04595	PF01566	AL549_RS04595
AL549_RS04600	PF03595	Voltage-dependent anion channel
AL549_RS04605	PF00654	Voltage gated chloride channel
AL549_RS04630	PF00248	Aldo/keto reductase family
AL549_RS04640	PF01546	Peptidase family M20/M25/M40
AL549_RS04640	PF07687	Peptidase dimerisation domain
AL549_RS04645	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL549_RS04650	PF16576	AL549_RS04650
AL549_RS04655	PF00873	AcrB/AcrD/AcrF family
AL549_RS04660	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS04665	PF13419	Haloacid dehalogenase-like hydrolase
AL549_RS04670	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL549_RS04670	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL549_RS04675	PF13462	Thioredoxin
AL549_RS04680	PF00691	OmpA family
AL549_RS04685	PF13417	Glutathione S-transferase, N-terminal domain
AL549_RS04695	PF07152	YaeQ protein
AL549_RS04700	PF00313	'Cold-shock' DNA-binding domain
AL549_RS04705	PF03889	AL549_RS04705
AL549_RS04710	PF06738	AL549_RS04710
AL549_RS04710	PF12821	AL549_RS04710
AL549_RS04715	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS04715	PF00990	GGDEF domain
AL549_RS04725	PF01238	Phosphomannose isomerase type I
AL549_RS04730	PF07690	Major Facilitator Superfamily
AL549_RS04735	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS04735	PF05231	AL549_RS04735
AL549_RS04735	PF07730	Histidine kinase
AL549_RS04740	PF00072	Response regulator receiver domain
AL549_RS04740	PF00196	Bacterial regulatory proteins, luxR family
AL549_RS04745	PF07690	Major Facilitator Superfamily
AL549_RS04750	PF11216	AL549_RS04750
AL549_RS04755	PF00043	Glutathione S-transferase, C-terminal domain
AL549_RS04755	PF02798	Glutathione S-transferase, N-terminal domain
AL549_RS04760	PF00107	Zinc-binding dehydrogenase
AL549_RS04760	PF16884	AL549_RS04760
AL549_RS04765	PF00440	Bacterial regulatory proteins, tetR family
AL549_RS04770	PF01699	Sodium/calcium exchanger protein
AL549_RS04780	PF00313	'Cold-shock' DNA-binding domain
AL549_RS04785	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_RS04785	PF13192	Thioredoxin domain
AL549_RS04790	PF00578	AhpC/TSA family
AL549_RS04790	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AL549_RS04795	PF00682	HMGL-like
AL549_RS04800	PF00378	Enoyl-CoA hydratase/isomerase family
AL549_RS04805	PF01039	Carboxyl transferase domain
AL549_RS04810	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL549_RS04810	PF02770	Acyl-CoA dehydrogenase, middle domain
AL549_RS04810	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL549_RS04815	PF13411	MerR HTH family regulatory protein
AL549_RS04820	PF00108	Thiolase, N-terminal domain
AL549_RS04820	PF02803	Thiolase, C-terminal domain
AL549_RS04825	PF00171	Aldehyde dehydrogenase family
AL549_RS04830	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL549_RS04830	PF02770	Acyl-CoA dehydrogenase, middle domain
AL549_RS04830	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL549_RS04835	PF00378	Enoyl-CoA hydratase/isomerase family
AL549_RS04840	PF16113	AL549_RS04840
AL549_RS04845	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL549_RS04845	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL549_RS04850	PF13561	Enoyl-(Acyl carrier protein) reductase
AL549_RS04860	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS04865	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS04870	PF00005	ABC transporter
AL549_RS04870	PF00664	ABC transporter transmembrane region
AL549_RS04870	PF03412	Peptidase C39 family
AL549_RS04875	PF13437	HlyD family secretion protein
AL549_RS04880	PF00005	ABC transporter
AL549_RS04880	PF00664	ABC transporter transmembrane region
AL549_RS04880	PF03412	Peptidase C39 family
AL549_RS04890	PF02794	AL549_RS04890
AL549_RS04895	PF07634	AL549_RS04895
AL549_RS04895	PF11647	C-terminal region of Pasteurella multocida toxin residues 569-1285
AL549_RS04895	PF11713	Peptidase C80 family
AL549_RS04895	PF12146	Putative lysophospholipase
AL549_RS04900	PF00842	Alanine racemase, C-terminal domain
AL549_RS04900	PF01168	Alanine racemase, N-terminal domain
AL549_RS04905	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS04905	PF12729	AL549_RS04905
AL549_RS04910	PF05187	Electron transfer flavoprotein-ubiquinone oxidoreductase
AL549_RS04910	PF13450	NAD(P)-binding Rossmann-like domain
AL549_RS04915	PF01012	Electron transfer flavoprotein domain
AL549_RS04920	PF00766	Electron transfer flavoprotein FAD-binding domain
AL549_RS04920	PF01012	Electron transfer flavoprotein domain
AL549_RS04925	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AL549_RS04925	PF00364	Biotin-requiring enzyme
AL549_RS04925	PF02817	e3 binding domain
AL549_RS04930	PF02779	Transketolase, pyrimidine binding domain
AL549_RS04930	PF02780	Transketolase, C-terminal domain
AL549_RS04935	PF00676	Dehydrogenase E1 component
AL549_RS04940	PF00962	Adenosine/AMP deaminase
AL549_RS04945	PF08883	Dopa 4,5-dioxygenase family
AL549_RS04950	PF00072	Response regulator receiver domain
AL549_RS04950	PF11849	AL549_RS04950
AL549_RS04950	PF13487	HD domain
AL549_RS04955	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS04955	PF17149	AL549_RS04955
AL549_RS04975	PF01545	Cation efflux family
AL549_RS04980	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS04980	PF03466	LysR substrate binding domain
AL549_RS04985	PF08242	Methyltransferase domain
AL549_RS04990	PF00501	AMP-binding enzyme
AL549_RS04995	PF00351	Biopterin-dependent aromatic amino acid hydroxylase
AL549_RS05000	PF01329	Pterin 4 alpha carbinolamine dehydratase
AL549_RS05005	PF00563	EAL domain
AL549_RS05005	PF00990	GGDEF domain
AL549_RS05010	PF08888	HopJ type III effector protein
AL549_RS05015	PF06945	AL549_RS05015
AL549_RS05015	PF14375	AL549_RS05015
AL549_RS05020	PF12843	AL549_RS05020
AL549_RS05025	PF03479	Domain of unknown function (DUF296)
AL549_RS05030	PF00440	Bacterial regulatory proteins, tetR family
AL549_RS05035	PF00043	Glutathione S-transferase, C-terminal domain
AL549_RS05035	PF13417	Glutathione S-transferase, N-terminal domain
AL549_RS05040	PF00069	Protein kinase domain
AL549_RS05045	PF00498	FHA domain
AL549_RS05050	PF12790	Type VI secretion lipoprotein
AL549_RS05055	PF05936	AL549_RS05055
AL549_RS05060	PF00691	OmpA family
AL549_RS05060	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
AL549_RS05065	PF06744	AL549_RS05065
AL549_RS05065	PF06761	AL549_RS05065
AL549_RS05065	PF14331	AL549_RS05065
AL549_RS05070	PF09867	Uncharacterized protein conserved in bacteria (DUF2094)
AL549_RS05075	PF13672	Protein phosphatase 2C
AL549_RS05080	PF06812	AL549_RS05080
AL549_RS05085	PF05591	AL549_RS05085
AL549_RS05090	PF05943	AL549_RS05090
AL549_RS05095	PF05943	AL549_RS05095
AL549_RS05100	PF07024	ImpE protein
AL549_RS05105	PF04965	Gene 25-like lysozyme
AL549_RS05110	PF05947	AL549_RS05110
AL549_RS05115	PF06996	AL549_RS05115
AL549_RS05120	PF00004	ATPase family associated with various cellular activities (AAA)
AL549_RS05120	PF07724	AAA domain (Cdc48 subfamily)
AL549_RS05120	PF10431	C-terminal, D2-small domain, of ClpB protein
AL549_RS05125	PF05638	Protein of unknown function (DUF796)
AL549_RS05130	PF05954	Phage late control gene D protein (GPD)
AL549_RS05135	PF05488	PAAR motif
AL549_RS05145	PF03527	AL549_RS05145
AL549_RS05145	PF05593	AL549_RS05145
AL549_RS05170	PF15575	AL549_RS05170
AL549_RS05185	PF08887	AL549_RS05185
AL549_RS05185	PF08906	AL549_RS05185
AL549_RS05200	PF03372	Endonuclease/Exonuclease/phosphatase family
AL549_RS05205	PF01435	Peptidase family M48
AL549_RS05210	PF04011	LemA family
AL549_RS05215	PF03606	AL549_RS05215
AL549_RS05220	PF07963	Prokaryotic N-terminal methylation motif
AL549_RS05225	PF01523	Putative modulator of DNA gyrase
AL549_RS05230	PF01523	Putative modulator of DNA gyrase
AL549_RS05235	PF03009	Glycerophosphoryl diester phosphodiesterase family
AL549_RS05240	PF07690	Major Facilitator Superfamily
AL549_RS05245	PF00652	Ricin-type beta-trefoil lectin domain
AL549_RS05245	PF07968	Leukocidin/Hemolysin toxin family
AL549_RS05255	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS05255	PF00672	HAMP domain
AL549_RS05255	PF02743	Cache domain
AL549_RS05260	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS05260	PF00672	HAMP domain
AL549_RS05260	PF02743	Cache domain
AL549_RS05265	PF00128	Alpha amylase, catalytic domain
AL549_RS05270	PF00583	Acetyltransferase (GNAT) family
AL549_RS05275	PF00384	Molybdopterin oxidoreductase
AL549_RS05275	PF01568	Molydopterin dinucleotide binding domain
AL549_RS05275	PF04324	BFD-like [2Fe-2S] binding domain
AL549_RS05275	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL549_RS05280	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL549_RS05285	PF02885	Glycosyl transferase family, helical bundle domain
AL549_RS05290	PF01738	Dienelactone hydrolase family
AL549_RS05295	PF03861	ANTAR domain
AL549_RS05300	PF13379	NMT1-like family
AL549_RS05305	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS05310	PF00005	ABC transporter
AL549_RS05315	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL549_RS05315	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL549_RS05315	PF04324	BFD-like [2Fe-2S] binding domain
AL549_RS05315	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_RS05320	PF13806	Rieske-like [2Fe-2S] domain
AL549_RS05325	PF02412	Thrombospondin type 3 repeat
AL549_RS05330	PF00990	GGDEF domain
AL549_RS05330	PF13181	Tetratricopeptide repeat
AL549_RS05330	PF13424	Tetratricopeptide repeat
AL549_RS05335	PF12847	Methyltransferase domain
AL549_RS05340	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AL549_RS05350	PF00270	DEAD/DEAH box helicase
AL549_RS05350	PF00271	Helicase conserved C-terminal domain
AL549_RS05355	PF00491	Arginase family
AL549_RS05360	PF01614	Bacterial transcriptional regulator
AL549_RS05360	PF09339	IclR helix-turn-helix domain
AL549_RS05365	PF00072	Response regulator receiver domain
AL549_RS05365	PF00990	GGDEF domain
AL549_RS05370	PF01339	CheB methylesterase
AL549_RS05375	PF01739	CheR methyltransferase, SAM binding domain
AL549_RS05375	PF03705	CheR methyltransferase, all-alpha domain
AL549_RS05380	PF00072	Response regulator receiver domain
AL549_RS05380	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS05380	PF00672	HAMP domain
AL549_RS05380	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS05380	PF02743	Cache domain
AL549_RS05380	PF13185	GAF domain
AL549_RS05385	PF01575	MaoC like domain
AL549_RS05405	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS05405	PF08447	PAS fold
AL549_RS05410	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL549_RS05410	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL549_RS05410	PF04324	BFD-like [2Fe-2S] binding domain
AL549_RS05410	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_RS05415	PF13806	Rieske-like [2Fe-2S] domain
AL549_RS05420	PF01226	Formate/nitrite transporter
AL549_RS05425	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL549_RS05430	PF13778	AL549_RS05430
AL549_RS05435	PF01936	NYN domain
AL549_RS05440	PF11932	AL549_RS05440
AL549_RS05445	PF01618	AL549_RS05445
AL549_RS05450	PF01618	AL549_RS05450
AL549_RS05455	PF02472	Biopolymer transport protein ExbD/TolR
AL549_RS05460	PF03544	Gram-negative bacterial TonB protein C-terminal
AL549_RS05465	PF13428	Tetratricopeptide repeat
AL549_RS05470	PF03605	AL549_RS05470
AL549_RS05475	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS05475	PF00672	HAMP domain
AL549_RS05475	PF17200	AL549_RS05475
AL549_RS05480	PF11661	AL549_RS05480
AL549_RS05485	PF11756	AL549_RS05485
AL549_RS05490	PF01554	MatE
AL549_RS05495	PF12833	Helix-turn-helix domain
AL549_RS05500	PF07690	Major Facilitator Superfamily
AL549_RS05505	PF00085	Thioredoxin
AL549_RS05510	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AL549_RS05510	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL549_RS05515	PF07394	AL549_RS05515
AL549_RS05520	PF08811	AL549_RS05520
AL549_RS05525	PF00581	Rhodanese-like domain
AL549_RS05525	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL549_RS05525	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_RS05530	PF11127	Protein of unknown function (DUF2892)
AL549_RS05535	PF01022	Bacterial regulatory protein, arsR family
AL549_RS05540	PF04143	AL549_RS05540
AL549_RS05545	PF04143	AL549_RS05545
AL549_RS05550	PF16576	AL549_RS05550
AL549_RS05555	PF00873	AcrB/AcrD/AcrF family
AL549_RS05560	PF03372	Endonuclease/Exonuclease/phosphatase family
AL549_RS05565	PF03477	ATP cone domain
AL549_RS05565	PF13597	Anaerobic ribonucleoside-triphosphate reductase
AL549_RS05570	PF13353	4Fe-4S single cluster domain
AL549_RS05575	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS05575	PF02743	Cache domain
AL549_RS05580	PF00155	Aminotransferase class I and II
AL549_RS05585	PF05618	Putative ATP-dependant zinc protease
AL549_RS05590	PF01609	Transposase DDE domain
AL549_RS05590	PF13006	AL549_RS05590
AL549_RS05600	PF04076	Bacterial OB fold (BOF) protein
AL549_RS05605	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AL549_RS05605	PF07685	CobB/CobQ-like glutamine amidotransferase domain
AL549_RS05610	PF13531	Bacterial extracellular solute-binding protein
AL549_RS05615	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS05620	PF00005	ABC transporter
AL549_RS05620	PF03459	TOBE domain
AL549_RS05625	PF00892	EamA-like transporter family
AL549_RS05630	PF01047	MarR family
AL549_RS05635	PF11269	Protein of unknown function (DUF3069)
AL549_RS05640	PF00072	Response regulator receiver domain
AL549_RS05640	PF00990	GGDEF domain
AL549_RS05645	PF11557	AL549_RS05645
AL549_RS05650	PF00990	GGDEF domain
AL549_RS05655	PF10719	AL549_RS05655
AL549_RS05660	PF10115	AL549_RS05660
AL549_RS05665	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AL549_RS05665	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
AL549_RS05665	PF12769	Domain of unknown function (DUF3814)
AL549_RS05670	PF02233	NAD(P) transhydrogenase beta subunit
AL549_RS05675	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS05675	PF11884	Domain of unknown function (DUF3404)
AL549_RS05680	PF00072	Response regulator receiver domain
AL549_RS05680	PF00486	Transcriptional regulatory protein, C terminal
AL549_RS05685	PF11060	AL549_RS05685
AL549_RS05690	PF13729	AL549_RS05690
AL549_RS05695	PF03701	AL549_RS05695
AL549_RS05705	PF01253	Translation initiation factor SUI1
AL549_RS05710	PF11782	AL549_RS05710
AL549_RS05715	PF01820	D-ala D-ala ligase N-terminus
AL549_RS05715	PF07478	D-ala D-ala ligase C-terminus
AL549_RS05720	PF05036	Sporulation related domain
AL549_RS05725	PF00583	Acetyltransferase (GNAT) family
AL549_RS05725	PF13380	CoA binding domain
AL549_RS05725	PF13549	ATP-grasp domain
AL549_RS05725	PF13607	Succinyl-CoA ligase like flavodoxin domain
AL549_RS05730	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS05730	PF03466	LysR substrate binding domain
AL549_RS05735	PF00593	TonB dependent receptor
AL549_RS05735	PF07715	TonB-dependent Receptor Plug Domain
AL549_RS05740	PF00989	PAS fold
AL549_RS05740	PF00990	GGDEF domain
AL549_RS05740	PF13426	PAS domain
AL549_RS05740	PF17152	AL549_RS05740
AL549_RS05745	PF13689	AL549_RS05745
AL549_RS05750	PF03746	LamB/YcsF family
AL549_RS05755	PF02682	Allophanate hydrolase subunit 1
AL549_RS05760	PF02626	Allophanate hydrolase subunit 2
AL549_RS05765	PF01266	FAD dependent oxidoreductase
AL549_RS05770	PF02687	AL549_RS05770
AL549_RS05770	PF12704	MacB-like periplasmic core domain
AL549_RS05775	PF00005	ABC transporter
AL549_RS05780	PF13472	GDSL-like Lipase/Acylhydrolase family
AL549_RS05785	PF07055	Enoyl reductase FAD binding domain
AL549_RS05785	PF12241	Trans-2-enoyl-CoA reductase catalytic region
AL549_RS05785	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
AL549_RS05790	PF00563	EAL domain
AL549_RS05790	PF00990	GGDEF domain
AL549_RS05795	PF09818	Predicted ATPase of the ABC class
AL549_RS05800	PF13302	Acetyltransferase (GNAT) domain
AL549_RS05805	PF00226	DnaJ domain
AL549_RS05805	PF12339	AL549_RS05805
AL549_RS05810	PF03171	2OG-Fe(II) oxygenase superfamily
AL549_RS05810	PF14226	non-haem dioxygenase in morphine synthesis N-terminal
AL549_RS05815	PF09997	AL549_RS05815
AL549_RS05820	PF03091	CutA1 divalent ion tolerance protein
AL549_RS05825	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS05825	PF03466	LysR substrate binding domain
AL549_RS05830	PF00128	Alpha amylase, catalytic domain
AL549_RS05830	PF16657	AL549_RS05830
AL549_RS05840	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_RS05840	PF12793	AL549_RS05840
AL549_RS05845	PF11869	AL549_RS05845
AL549_RS05850	PF03061	Thioesterase superfamily
AL549_RS05855	PF01435	Peptidase family M48
AL549_RS05865	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL549_RS05870	PF12262	AL549_RS05870
AL549_RS05875	PF03831	PhnA protein
AL549_RS05875	PF08274	PhnA Zinc-Ribbon
AL549_RS05880	PF12680	SnoaL-like domain
AL549_RS05885	PF00491	Arginase family
AL549_RS05890	PF00892	EamA-like transporter family
AL549_RS05900	PF03741	AL549_RS05900
AL549_RS05905	PF00149	Calcineurin-like phosphoesterase
AL549_RS05905	PF02872	5'-nucleotidase, C-terminal domain
AL549_RS05910	PF11398	Protein of unknown function (DUF2813)
AL549_RS05915	PF06496	AL549_RS05915
AL549_RS05920	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS05920	PF03466	LysR substrate binding domain
AL549_RS05925	PF00571	CBS domain
AL549_RS05925	PF01226	Formate/nitrite transporter
AL549_RS05930	PF04264	YceI-like domain
AL549_RS05935	PF01292	Prokaryotic cytochrome b561
AL549_RS05945	PF00563	EAL domain
AL549_RS05950	PF00270	DEAD/DEAH box helicase
AL549_RS05950	PF00271	Helicase conserved C-terminal domain
AL549_RS05955	PF04336	AL549_RS05955
AL549_RS05960	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS05970	PF13419	Haloacid dehalogenase-like hydrolase
AL549_RS05975	PF13487	HD domain
AL549_RS05985	PF05981	AL549_RS05985
AL549_RS05990	PF00294	pfkB family carbohydrate kinase
AL549_RS05995	PF01268	Formate--tetrahydrofolate ligase
AL549_RS06000	PF00483	Nucleotidyl transferase
AL549_RS06005	PF00704	Glycosyl hydrolases family 18
AL549_RS06005	PF06483	AL549_RS06005
AL549_RS06010	PF06719	AL549_RS06010
AL549_RS06010	PF12833	Helix-turn-helix domain
AL549_RS06015	PF00465	Iron-containing alcohol dehydrogenase
AL549_RS06020	PF00072	Response regulator receiver domain
AL549_RS06020	PF02954	Bacterial regulatory protein, Fis family
AL549_RS06020	PF14532	Sigma-54 interaction domain
AL549_RS06025	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS06025	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS06030	PF13343	Bacterial extracellular solute-binding protein
AL549_RS06035	PF07690	Major Facilitator Superfamily
AL549_RS06040	PF00224	Pyruvate kinase, barrel domain
AL549_RS06040	PF02887	Pyruvate kinase, alpha/beta domain
AL549_RS06045	PF00563	EAL domain
AL549_RS06050	PF13275	S4 domain
AL549_RS06055	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS06060	PF03372	Endonuclease/Exonuclease/phosphatase family
AL549_RS06065	PF00356	Bacterial regulatory proteins, lacI family
AL549_RS06065	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL549_RS06070	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL549_RS06070	PF00381	PTS HPr component phosphorylation site
AL549_RS06075	PF00294	pfkB family carbohydrate kinase
AL549_RS06080	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL549_RS06080	PF02378	Phosphotransferase system, EIIC
AL549_RS06085	PF13505	Outer membrane protein beta-barrel domain
AL549_RS06090	PF00873	AcrB/AcrD/AcrF family
AL549_RS06095	PF13437	HlyD family secretion protein
AL549_RS06095	PF13533	Biotin-lipoyl like
AL549_RS06100	PF16576	AL549_RS06100
AL549_RS06105	PF00440	Bacterial regulatory proteins, tetR family
AL549_RS06110	PF00089	Trypsin
AL549_RS06115	PF01571	Aminomethyltransferase folate-binding domain
AL549_RS06115	PF08669	Glycine cleavage T-protein C-terminal barrel domain
AL549_RS06120	PF01381	Helix-turn-helix
AL549_RS06120	PF07883	Cupin domain
AL549_RS06125	PF00464	Serine hydroxymethyltransferase
AL549_RS06130	PF01597	Glycine cleavage H-protein
AL549_RS06135	PF02347	Glycine cleavage system P-protein
AL549_RS06145	PF08843	Nucleotidyl transferase of unknown function (DUF1814)
AL549_RS06155	PF00005	ABC transporter
AL549_RS06155	PF00664	ABC transporter transmembrane region
AL549_RS06160	PF01909	Nucleotidyltransferase domain
AL549_RS06165	PF00795	Carbon-nitrogen hydrolase
AL549_RS06175	PF16691	AL549_RS06175
AL549_RS06180	PF02661	Fic/DOC family
AL549_RS06180	PF13776	AL549_RS06180
AL549_RS06190	PF13437	HlyD family secretion protein
AL549_RS06190	PF13533	Biotin-lipoyl like
AL549_RS06195	PF07690	Major Facilitator Superfamily
AL549_RS06210	PF07690	Major Facilitator Superfamily
AL549_RS06215	PF08774	VRR-NUC domain
AL549_RS06220	PF13432	Tetratricopeptide repeat
AL549_RS06225	PF04055	Radical SAM superfamily
AL549_RS06225	PF13186	Iron-sulfur cluster-binding domain
AL549_RS06230	PF03781	Sulfatase-modifying factor enzyme 1
AL549_RS06235	PF01663	Type I phosphodiesterase / nucleotide pyrophosphatase
AL549_RS06240	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS06240	PF03466	LysR substrate binding domain
AL549_RS06245	PF13584	AL549_RS06245
AL549_RS06250	PF13519	von Willebrand factor type A domain
AL549_RS06255	PF00092	von Willebrand factor type A domain
AL549_RS06260	PF14316	AL549_RS06260
AL549_RS06265	PF01882	AL549_RS06265
AL549_RS06270	PF07726	ATPase family associated with various cellular activities (AAA)
AL549_RS06275	PF04055	Radical SAM superfamily
AL549_RS06275	PF13186	Iron-sulfur cluster-binding domain
AL549_RS06275	PF13353	4Fe-4S single cluster domain
AL549_RS06280	PF00884	Sulfatase
AL549_RS06285	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS06285	PF03466	LysR substrate binding domain
AL549_RS06290	PF00884	Sulfatase
AL549_RS06295	PF00871	Acetokinase family
AL549_RS06300	PF00270	DEAD/DEAH box helicase
AL549_RS06300	PF00271	Helicase conserved C-terminal domain
AL549_RS06300	PF03880	DbpA RNA binding domain
AL549_RS06305	PF00575	S1 RNA binding domain
AL549_RS06305	PF00773	RNB domain
AL549_RS06305	PF08206	Ribonuclease B OB domain
AL549_RS06310	PF12833	Helix-turn-helix domain
AL549_RS06315	PF11225	AL549_RS06315
AL549_RS06320	PF12849	PBP superfamily domain
AL549_RS06330	PF00563	EAL domain
AL549_RS06330	PF00990	GGDEF domain
AL549_RS06330	PF01590	GAF domain
AL549_RS06340	PF00072	Response regulator receiver domain
AL549_RS06345	PF00072	Response regulator receiver domain
AL549_RS06345	PF00196	Bacterial regulatory proteins, luxR family
AL549_RS06345	PF00563	EAL domain
AL549_RS06350	PF00072	Response regulator receiver domain
AL549_RS06350	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS06350	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS06350	PF01627	Hpt domain
AL549_RS06350	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS06355	PF00270	DEAD/DEAH box helicase
AL549_RS06355	PF00271	Helicase conserved C-terminal domain
AL549_RS06355	PF03880	DbpA RNA binding domain
AL549_RS06360	PF11854	AL549_RS06360
AL549_RS06365	PF09699	Doubled CXXCH motif (Paired_CXXCH_1)
AL549_RS06375	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL549_RS06380	PF03264	NapC/NirT cytochrome c family, N-terminal region
AL549_RS06385	PF03781	Sulfatase-modifying factor enzyme 1
AL549_RS06385	PF08308	AL549_RS06385
AL549_RS06390	PF08308	AL549_RS06390
AL549_RS06395	PF06934	AL549_RS06395
AL549_RS06405	PF00072	Response regulator receiver domain
AL549_RS06405	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS06405	PF01627	Hpt domain
AL549_RS06405	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS06410	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL549_RS06415	PF02142	MGS-like domain
AL549_RS06420	PF00580	UvrD/REP helicase N-terminal domain
AL549_RS06420	PF12462	AL549_RS06420
AL549_RS06420	PF13361	UvrD-like helicase C-terminal domain
AL549_RS06425	PF12805	AL549_RS06425
AL549_RS06425	PF13515	AL549_RS06425
AL549_RS06440	PF00368	Hydroxymethylglutaryl-coenzyme A reductase
AL549_RS06450	PF10688	AL549_RS06450
AL549_RS06455	PF00376	MerR family regulatory protein
AL549_RS06455	PF09278	MerR, DNA binding
AL549_RS06460	PF00005	ABC transporter
AL549_RS06465	PF01032	FecCD transport family
AL549_RS06470	PF01032	FecCD transport family
AL549_RS06480	PF03819	MazG nucleotide pyrophosphohydrolase domain
AL549_RS06485	PF00293	NUDIX domain
AL549_RS06490	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_RS06490	PF12464	Maltose acetyltransferase
AL549_RS06495	PF00072	Response regulator receiver domain
AL549_RS06500	PF14501	GHKL domain
AL549_RS06500	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
AL549_RS06500	PF17203	AL549_RS06500
AL549_RS06505	PF00939	Sodium:sulfate symporter transmembrane region
AL549_RS06510	PF01764	Lipase (class 3)
AL549_RS06530	PF03372	Endonuclease/Exonuclease/phosphatase family
AL549_RS06535	PF00031	Cystatin domain
AL549_RS06540	PF00691	OmpA family
AL549_RS06550	PF16964	AL549_RS06550
AL549_RS06560	PF13432	Tetratricopeptide repeat
AL549_RS06565	PF00482	Type II secretion system (T2SS), protein F
AL549_RS06570	PF00482	Type II secretion system (T2SS), protein F
AL549_RS06575	PF00437	Type II/IV secretion system protein
AL549_RS06590	PF00263	AL549_RS06590
AL549_RS06590	PF13629	AL549_RS06590
AL549_RS06600	PF04964	AL549_RS06600
AL549_RS06605	PF01478	Type IV leader peptidase family
AL549_RS06610	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS06615	PF05547	AL549_RS06615
AL549_RS06620	PF13476	AAA domain
AL549_RS06620	PF13558	Putative exonuclease SbcCD, C subunit
AL549_RS06625	PF00149	Calcineurin-like phosphoesterase
AL549_RS06625	PF12320	Type 5 capsule protein repressor C-terminal domain
AL549_RS06635	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS06635	PF08447	PAS fold
AL549_RS06640	PF01926	50S ribosome-binding GTPase
AL549_RS06645	PF00583	Acetyltransferase (GNAT) family
AL549_RS06650	PF00487	AL549_RS06650
AL549_RS06655	PF00072	Response regulator receiver domain
AL549_RS06655	PF01584	CheW-like domain
AL549_RS06665	PF00356	Bacterial regulatory proteins, lacI family
AL549_RS06665	PF13377	Periplasmic binding protein-like domain
AL549_RS06670	PF00294	pfkB family carbohydrate kinase
AL549_RS06675	PF13407	Periplasmic binding protein domain
AL549_RS06680	PF02653	AL549_RS06680
AL549_RS06685	PF00005	ABC transporter
AL549_RS06690	PF05025	RbsD / FucU transport protein family
AL549_RS06695	PF01810	AL549_RS06695
AL549_RS06700	PF06127	AL549_RS06700
AL549_RS06705	PF04237	YjbR
AL549_RS06710	PF05762	VWA domain containing CoxE-like protein
AL549_RS06715	PF07728	AAA domain (dynein-related subfamily)
AL549_RS06715	PF12592	Protein of unknown function (DUF3763)
AL549_RS06720	PF00293	NUDIX domain
AL549_RS06725	PF01212	Beta-eliminating lyase
AL549_RS06730	PF00034	Cytochrome c
AL549_RS06735	PF00171	Aldehyde dehydrogenase family
AL549_RS06740	PF03606	AL549_RS06740
AL549_RS06745	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL549_RS06750	PF01569	PAP2 superfamily
AL549_RS06755	PF04266	ASCH domain
AL549_RS06760	PF01852	START domain
AL549_RS06765	PF00892	EamA-like transporter family
AL549_RS06770	PF03067	Chitin binding domain
AL549_RS06775	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AL549_RS06780	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS06780	PF02743	Cache domain
AL549_RS06785	PF01925	AL549_RS06785
AL549_RS06790	PF00149	Calcineurin-like phosphoesterase
AL549_RS06795	PF03222	Tryptophan/tyrosine permease family
AL549_RS06800	PF11964	SpoIIAA-like
AL549_RS06805	PF07238	PilZ domain
AL549_RS06815	PF01447	Thermolysin metallopeptidase, catalytic domain
AL549_RS06815	PF02868	Thermolysin metallopeptidase, alpha-helical domain
AL549_RS06820	PF02308	AL549_RS06820
AL549_RS06820	PF13194	AL549_RS06820
AL549_RS06825	PF00873	AcrB/AcrD/AcrF family
AL549_RS06830	PF16576	AL549_RS06830
AL549_RS06840	PF10604	Polyketide cyclase / dehydrase and lipid transport
AL549_RS06855	PF00581	Rhodanese-like domain
AL549_RS06860	PF00012	Hsp70 protein
AL549_RS06865	PF00465	Iron-containing alcohol dehydrogenase
AL549_RS06870	PF06961	AL549_RS06870
AL549_RS06875	PF07995	Glucose / Sorbosone dehydrogenase
AL549_RS06880	PF02016	LD-carboxypeptidase
AL549_RS06885	PF01212	Beta-eliminating lyase
AL549_RS06890	PF13419	Haloacid dehalogenase-like hydrolase
AL549_RS06895	PF02754	AL549_RS06895
AL549_RS06895	PF13183	4Fe-4S dicluster domain
AL549_RS06900	PF00890	FAD binding domain
AL549_RS06905	PF01266	FAD dependent oxidoreductase
AL549_RS06905	PF04324	BFD-like [2Fe-2S] binding domain
AL549_RS06915	PF01483	Proprotein convertase P-domain
AL549_RS06915	PF13582	Metallo-peptidase family M12B Reprolysin-like
AL549_RS06920	PF10974	AL549_RS06920
AL549_RS06925	PF03618	AL549_RS06925
AL549_RS06930	PF00391	PEP-utilising enzyme, mobile domain
AL549_RS06930	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
AL549_RS06930	PF02896	PEP-utilising enzyme, TIM barrel domain
AL549_RS06935	PF04224	AL549_RS06935
AL549_RS06940	PF00005	ABC transporter
AL549_RS06945	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS06950	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AL549_RS06955	PF00732	GMC oxidoreductase
AL549_RS06955	PF05199	GMC oxidoreductase
AL549_RS06960	PF00171	Aldehyde dehydrogenase family
AL549_RS06965	PF00440	Bacterial regulatory proteins, tetR family
AL549_RS06965	PF13977	Bacterial transcriptional repressor
AL549_RS06970	PF13181	Tetratricopeptide repeat
AL549_RS06975	PF01551	Peptidase family M23
AL549_RS06985	PF00768	D-alanyl-D-alanine carboxypeptidase
AL549_RS06985	PF07943	Penicillin-binding protein 5, C-terminal domain
AL549_RS06990	PF00293	NUDIX domain
AL549_RS07000	PF02698	DUF218 domain
AL549_RS07005	PF03313	AL549_RS07005
AL549_RS07005	PF03315	Serine dehydratase beta chain
AL549_RS07010	PF07690	Major Facilitator Superfamily
AL549_RS07015	PF01636	Phosphotransferase enzyme family
AL549_RS07020	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS07020	PF03466	LysR substrate binding domain
AL549_RS07025	PF01266	FAD dependent oxidoreductase
AL549_RS07030	PF00892	EamA-like transporter family
AL549_RS07035	PF00392	Bacterial regulatory proteins, gntR family
AL549_RS07035	PF07702	UTRA domain
AL549_RS07040	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS07045	PF00005	ABC transporter
AL549_RS07045	PF08402	TOBE domain
AL549_RS07055	PF13343	Bacterial extracellular solute-binding protein
AL549_RS07060	PF00266	Aminotransferase class-V
AL549_RS07065	PF00202	Aminotransferase class-III
AL549_RS07070	PF13419	Haloacid dehalogenase-like hydrolase
AL549_RS07075	PF06445	GyrI-like small molecule binding domain
AL549_RS07075	PF12833	Helix-turn-helix domain
AL549_RS07080	PF00155	Aminotransferase class I and II
AL549_RS07090	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS07100	PF12833	Helix-turn-helix domain
AL549_RS07100	PF12852	Cupin
AL549_RS07105	PF13419	Haloacid dehalogenase-like hydrolase
AL549_RS07110	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS07110	PF03466	LysR substrate binding domain
AL549_RS07120	PF08279	HTH domain
AL549_RS07120	PF13280	AL549_RS07120
AL549_RS07125	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_RS07125	PF12464	Maltose acetyltransferase
AL549_RS07130	PF02566	OsmC-like protein
AL549_RS07135	PF01625	Peptide methionine sulfoxide reductase
AL549_RS07135	PF01641	SelR domain
AL549_RS07140	PF00990	GGDEF domain
AL549_RS07150	PF01381	Helix-turn-helix
AL549_RS07150	PF06114	Domain of unknown function (DUF955)
AL549_RS07150	PF12268	AL549_RS07150
AL549_RS07155	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS07155	PF08376	Nitrate and nitrite sensing
AL549_RS07160	PF00990	GGDEF domain
AL549_RS07160	PF03924	CHASE domain
AL549_RS07165	PF13532	2OG-Fe(II) oxygenase superfamily
AL549_RS07170	PF12060	AL549_RS07170
AL549_RS07175	PF01773	Na+ dependent nucleoside transporter N-terminus
AL549_RS07175	PF07662	Na+ dependent nucleoside transporter C-terminus
AL549_RS07175	PF07670	Nucleoside recognition
AL549_RS07185	PF11140	AL549_RS07185
AL549_RS07190	PF13302	Acetyltransferase (GNAT) domain
AL549_RS07195	PF07963	Prokaryotic N-terminal methylation motif
AL549_RS07200	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL549_RS07200	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL549_RS07210	PF01564	Spermine/spermidine synthase
AL549_RS07215	PF13419	Haloacid dehalogenase-like hydrolase
AL549_RS07220	PF01551	Peptidase family M23
AL549_RS07220	PF04225	Opacity-associated protein A LysM-like domain
AL549_RS07230	PF04828	Glutathione-dependent formaldehyde-activating enzyme
AL549_RS07235	PF06912	AL549_RS07235
AL549_RS07240	PF07670	Nucleoside recognition
AL549_RS07245	PF04932	AL549_RS07245
AL549_RS07250	PF01757	AL549_RS07250
AL549_RS07255	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS07255	PF00672	HAMP domain
AL549_RS07255	PF02743	Cache domain
AL549_RS07260	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS07260	PF00672	HAMP domain
AL549_RS07260	PF02743	Cache domain
AL549_RS07265	PF00128	Alpha amylase, catalytic domain
AL549_RS07270	PF00582	Universal stress protein family
AL549_RS07275	PF13616	PPIC-type PPIASE domain
AL549_RS07280	PF00072	Response regulator receiver domain
AL549_RS07280	PF01584	CheW-like domain
AL549_RS07285	PF01923	Cobalamin adenosyltransferase
AL549_RS07290	PF01243	Pyridoxamine 5'-phosphate oxidase
AL549_RS07295	PF06228	Haem utilisation ChuX/HutX
AL549_RS07300	PF04055	Radical SAM superfamily
AL549_RS07305	PF03544	Gram-negative bacterial TonB protein C-terminal
AL549_RS07310	PF01618	AL549_RS07310
AL549_RS07315	PF02472	Biopolymer transport protein ExbD/TolR
AL549_RS07320	PF01497	Periplasmic binding protein
AL549_RS07325	PF01032	FecCD transport family
AL549_RS07330	PF00005	ABC transporter
AL549_RS07335	PF00440	Bacterial regulatory proteins, tetR family
AL549_RS07340	PF04175	Protein of unknown function (DUF406)
AL549_RS07345	PF07383	AL549_RS07345
AL549_RS07355	PF01928	CYTH domain
AL549_RS07355	PF05235	CHAD domain
AL549_RS07360	PF00520	Ion transport protein
AL549_RS07365	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS07370	PF03710	Glutamate-ammonia ligase adenylyltransferase
AL549_RS07370	PF08335	GlnD PII-uridylyltransferase
AL549_RS07375	PF00294	pfkB family carbohydrate kinase
AL549_RS07375	PF01467	Cytidylyltransferase
AL549_RS07380	PF02321	Outer membrane efflux protein
AL549_RS07385	PF00293	NUDIX domain
AL549_RS07390	PF06853	AL549_RS07390
AL549_RS07395	PF00149	Calcineurin-like phosphoesterase
AL549_RS07400	PF05728	Uncharacterised protein family (UPF0227)
AL549_RS07405	PF00204	DNA gyrase B
AL549_RS07405	PF00986	DNA gyrase B subunit, carboxyl terminus
AL549_RS07405	PF01751	Toprim domain
AL549_RS07405	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS07410	PF00521	DNA gyrase/topoisomerase IV, subunit A
AL549_RS07410	PF03989	DNA gyrase C-terminal domain, beta-propeller
AL549_RS07415	PF13180	PDZ domain
AL549_RS07415	PF13365	Trypsin-like peptidase domain
AL549_RS07420	PF00595	PDZ domain (Also known as DHR or GLGF)
AL549_RS07420	PF13180	PDZ domain
AL549_RS07420	PF13365	Trypsin-like peptidase domain
AL549_RS07425	PF06295	AL549_RS07425
AL549_RS07430	PF03969	AFG1-like ATPase
AL549_RS07440	PF00572	Ribosomal protein L13
AL549_RS07445	PF00380	Ribosomal protein S9/S16
AL549_RS07450	PF00355	Rieske [2Fe-2S] domain
AL549_RS07450	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
AL549_RS07455	PF00032	Cytochrome b(C-terminal)/b6/petD
AL549_RS07455	PF00033	Cytochrome b(N-terminal)/b6/petB
AL549_RS07460	PF02167	Cytochrome C1 family
AL549_RS07465	PF00043	Glutathione S-transferase, C-terminal domain
AL549_RS07465	PF13417	Glutathione S-transferase, N-terminal domain
AL549_RS07470	PF04386	Stringent starvation protein B
AL549_RS07475	PF04972	BON domain
AL549_RS07480	PF13580	SIS domain
AL549_RS07485	PF02021	Uncharacterised protein family UPF0102
AL549_RS07490	PF04348	LppC putative lipoprotein
AL549_RS07495	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL549_RS07505	PF01795	MraW methylase family
AL549_RS07510	PF04999	AL549_RS07510
AL549_RS07515	PF00905	Penicillin binding protein transpeptidase domain
AL549_RS07515	PF03717	Penicillin-binding Protein dimerisation domain
AL549_RS07520	PF01225	Mur ligase family, catalytic domain
AL549_RS07520	PF02875	Mur ligase family, glutamate ligase domain
AL549_RS07520	PF08245	Mur ligase middle domain
AL549_RS07525	PF01225	Mur ligase family, catalytic domain
AL549_RS07525	PF02875	Mur ligase family, glutamate ligase domain
AL549_RS07525	PF08245	Mur ligase middle domain
AL549_RS07530	PF00953	Glycosyl transferase family 4
AL549_RS07530	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
AL549_RS07535	PF02875	Mur ligase family, glutamate ligase domain
AL549_RS07535	PF08245	Mur ligase middle domain
AL549_RS07540	PF01098	AL549_RS07540
AL549_RS07545	PF03033	Glycosyltransferase family 28 N-terminal domain
AL549_RS07545	PF04101	Glycosyltransferase family 28 C-terminal domain
AL549_RS07550	PF01225	Mur ligase family, catalytic domain
AL549_RS07550	PF02875	Mur ligase family, glutamate ligase domain
AL549_RS07550	PF08245	Mur ligase middle domain
AL549_RS07555	PF03799	Cell division protein FtsQ
AL549_RS07555	PF08478	POTRA domain, FtsQ-type
AL549_RS07560	PF02491	SHS2 domain inserted in FTSA
AL549_RS07560	PF14450	Cell division protein FtsA
AL549_RS07565	PF00091	Tubulin/FtsZ family, GTPase domain
AL549_RS07565	PF12327	FtsZ family, C-terminal domain
AL549_RS07570	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
AL549_RS07575	PF05258	AL549_RS07575
AL549_RS07580	PF01043	SecA preprotein cross-linking domain
AL549_RS07580	PF02810	SEC-C motif
AL549_RS07580	PF07516	SecA Wing and Scaffold domain
AL549_RS07580	PF07517	SecA DEAD-like domain
AL549_RS07585	PF00293	NUDIX domain
AL549_RS07590	PF01113	Dihydrodipicolinate reductase, N-terminus
AL549_RS07590	PF05173	Dihydrodipicolinate reductase, C-terminus
AL549_RS07595	PF00117	Glutamine amidotransferase class-I
AL549_RS07595	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
AL549_RS07600	PF02142	MGS-like domain
AL549_RS07600	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL549_RS07600	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AL549_RS07615	PF01925	AL549_RS07615
AL549_RS07620	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS07620	PF03466	LysR substrate binding domain
AL549_RS07625	PF03458	AL549_RS07625
AL549_RS07630	PF01497	Periplasmic binding protein
AL549_RS07635	PF03186	AL549_RS07635
AL549_RS07640	PF01048	Phosphorylase superfamily
AL549_RS07645	PF07386	AL549_RS07645
AL549_RS07650	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_RS07650	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AL549_RS07655	PF00310	Glutamine amidotransferases class-II
AL549_RS07655	PF01493	GXGXG motif
AL549_RS07655	PF01645	Conserved region in glutamate synthase
AL549_RS07655	PF04898	Glutamate synthase central domain
AL549_RS07660	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_RS07660	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AL549_RS07665	PF00310	Glutamine amidotransferases class-II
AL549_RS07665	PF01493	GXGXG motif
AL549_RS07665	PF01645	Conserved region in glutamate synthase
AL549_RS07665	PF04898	Glutamate synthase central domain
AL549_RS07670	PF04055	Radical SAM superfamily
AL549_RS07670	PF16199	AL549_RS07670
AL549_RS07675	PF00990	GGDEF domain
AL549_RS07675	PF08448	PAS fold
AL549_RS07680	PF00072	Response regulator receiver domain
AL549_RS07680	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS07680	PF01627	Hpt domain
AL549_RS07680	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS07680	PF08448	PAS fold
AL549_RS07690	PF00072	Response regulator receiver domain
AL549_RS07690	PF00486	Transcriptional regulatory protein, C terminal
AL549_RS07700	PF11697	AL549_RS07700
AL549_RS07705	PF03737	Demethylmenaquinone methyltransferase
AL549_RS07715	PF00696	Amino acid kinase family
AL549_RS07715	PF00742	Homoserine dehydrogenase
AL549_RS07715	PF01842	ACT domain
AL549_RS07715	PF03447	Homoserine dehydrogenase, NAD binding domain
AL549_RS07720	PF00288	GHMP kinases N terminal domain
AL549_RS07720	PF08544	GHMP kinases C terminal
AL549_RS07725	PF00291	Pyridoxal-phosphate dependent enzyme
AL549_RS07725	PF14821	Threonine synthase N terminus
AL549_RS07730	PF01228	Glycine radical
AL549_RS07735	PF01261	Xylose isomerase-like TIM barrel
AL549_RS07740	PF03167	Uracil DNA glycosylase superfamily
AL549_RS07745	PF01814	Hemerythrin HHE cation binding domain
AL549_RS07750	PF12065	AL549_RS07750
AL549_RS07755	PF01235	AL549_RS07755
AL549_RS07760	PF03883	AL549_RS07760
AL549_RS07765	PF00270	DEAD/DEAH box helicase
AL549_RS07765	PF00271	Helicase conserved C-terminal domain
AL549_RS07770	PF05175	Methyltransferase small domain
AL549_RS07775	PF05525	AL549_RS07775
AL549_RS07780	PF00258	Flavodoxin
AL549_RS07785	PF00589	Phage integrase family
AL549_RS07785	PF02899	Phage integrase, N-terminal SAM-like domain
AL549_RS07790	PF10411	Disulfide bond isomerase protein N-terminus
AL549_RS07790	PF13098	Thioredoxin-like domain
AL549_RS07795	PF01368	DHH family
AL549_RS07795	PF02272	DHHA1 domain
AL549_RS07805	PF00152	tRNA synthetases class II (D, K and N)
AL549_RS07805	PF01336	OB-fold nucleic acid binding domain
AL549_RS07810	PF00158	Sigma-54 interaction domain
AL549_RS07810	PF02954	Bacterial regulatory protein, Fis family
AL549_RS07820	PF00248	Aldo/keto reductase family
AL549_RS07830	PF02976	DNA mismatch repair enzyme MutH
AL549_RS07835	PF00293	NUDIX domain
AL549_RS07840	PF00391	PEP-utilising enzyme, mobile domain
AL549_RS07840	PF01590	GAF domain
AL549_RS07840	PF02896	PEP-utilising enzyme, TIM barrel domain
AL549_RS07840	PF05524	PEP-utilising enzyme, N-terminal
AL549_RS07845	PF01925	AL549_RS07845
AL549_RS07850	PF01790	AL549_RS07850
AL549_RS07855	PF00303	Thymidylate synthase
AL549_RS07860	PF08014	AL549_RS07860
AL549_RS07865	PF02690	AL549_RS07865
AL549_RS07870	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS07870	PF03466	LysR substrate binding domain
AL549_RS07875	PF01022	Bacterial regulatory protein, arsR family
AL549_RS07880	PF01649	Ribosomal protein S20
AL549_RS07885	PF03023	AL549_RS07885
AL549_RS07890	PF01687	Riboflavin kinase
AL549_RS07890	PF06574	FAD synthetase
AL549_RS07895	PF00133	tRNA synthetases class I (I, L, M and V)
AL549_RS07895	PF06827	Zinc finger found in FPG and IleRS
AL549_RS07895	PF08264	Anticodon-binding domain of tRNA
AL549_RS07900	PF01252	AL549_RS07900
AL549_RS07905	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL549_RS07910	PF02401	LytB protein
AL549_RS07915	PF00072	Response regulator receiver domain
AL549_RS07915	PF04397	LytTr DNA-binding domain
AL549_RS07920	PF06580	AL549_RS07920
AL549_RS07920	PF07694	5TMR of 5TMR-LYT
AL549_RS07920	PF13492	GAF domain
AL549_RS07925	PF02554	AL549_RS07925
AL549_RS07925	PF13722	AL549_RS07925
AL549_RS07935	PF10973	AL549_RS07935
AL549_RS07940	PF00999	Sodium/hydrogen exchanger family
AL549_RS07940	PF02254	TrkA-N domain
AL549_RS07945	PF03702	Uncharacterised protein family (UPF0075)
AL549_RS07950	PF00933	Glycosyl hydrolase family 3 N terminal domain
AL549_RS07955	PF00793	DAHP synthetase I family
AL549_RS07960	PF01817	Chorismate mutase type II
AL549_RS07960	PF02153	Prephenate dehydrogenase
AL549_RS07965	PF01551	Peptidase family M23
AL549_RS07970	PF07238	PilZ domain
AL549_RS07975	PF00005	ABC transporter
AL549_RS07975	PF12848	ABC transporter
AL549_RS07980	PF01464	Transglycosylase SLT domain
AL549_RS07980	PF14718	Soluble lytic murein transglycosylase L domain
AL549_RS07985	PF01371	Trp repressor protein
AL549_RS07990	PF01931	Protein of unknown function DUF84
AL549_RS07995	PF00800	Prephenate dehydratase
AL549_RS07995	PF01817	Chorismate mutase type II
AL549_RS08000	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AL549_RS08005	PF13525	Outer membrane lipoprotein
AL549_RS08010	PF00849	RNA pseudouridylate synthase
AL549_RS08010	PF01479	S4 domain
AL549_RS08015	PF02578	Multi-copper polyphenol oxidoreductase laccase
AL549_RS08020	PF00004	ATPase family associated with various cellular activities (AAA)
AL549_RS08020	PF02861	Clp amino terminal domain
AL549_RS08020	PF07724	AAA domain (Cdc48 subfamily)
AL549_RS08020	PF10431	C-terminal, D2-small domain, of ClpB protein
AL549_RS08055	PF03411	Penicillin-insensitive murein endopeptidase
AL549_RS08060	PF00037	4Fe-4S binding domain
AL549_RS08065	PF01136	AL549_RS08065
AL549_RS08065	PF16325	AL549_RS08065
AL549_RS08070	PF04381	Putative exonuclease, RdgC
AL549_RS08075	PF00072	Response regulator receiver domain
AL549_RS08075	PF00486	Transcriptional regulatory protein, C terminal
AL549_RS08080	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS08080	PF00989	PAS fold
AL549_RS08080	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS08080	PF11808	AL549_RS08080
AL549_RS08085	PF12849	PBP superfamily domain
AL549_RS08090	PF02541	Ppx/GppA phosphatase family
AL549_RS08095	PF02503	Polyphosphate kinase middle domain
AL549_RS08095	PF13089	Polyphosphate kinase N-terminal domain
AL549_RS08095	PF13090	Polyphosphate kinase C-terminal domain
AL549_RS08100	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS08105	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS08110	PF00005	ABC transporter
AL549_RS08115	PF01895	PhoU domain
AL549_RS08135	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS08135	PF03466	LysR substrate binding domain
AL549_RS08140	PF03976	Polyphosphate kinase 2 (PPK2)
AL549_RS08145	PF03932	CutC family
AL549_RS08150	PF00578	AhpC/TSA family
AL549_RS08150	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AL549_RS08155	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS08155	PF03466	LysR substrate binding domain
AL549_RS08160	PF01274	Malate synthase
AL549_RS08165	PF00463	Isocitrate lyase family
AL549_RS08170	PF00571	CBS domain
AL549_RS08175	PF00089	Trypsin
AL549_RS08180	PF02547	Queuosine biosynthesis protein
AL549_RS08185	PF01702	Queuine tRNA-ribosyltransferase
AL549_RS08190	PF02699	Preprotein translocase subunit
AL549_RS08195	PF02355	Protein export membrane protein
AL549_RS08195	PF07549	SecD/SecF GG Motif
AL549_RS08195	PF13721	SecD export protein N-terminal TM region
AL549_RS08200	PF02355	Protein export membrane protein
AL549_RS08200	PF07549	SecD/SecF GG Motif
AL549_RS08215	PF00459	Inositol monophosphatase family
AL549_RS08220	PF00588	SpoU rRNA Methylase family
AL549_RS08225	PF02082	Transcriptional regulator
AL549_RS08230	PF00266	Aminotransferase class-V
AL549_RS08235	PF01592	NifU-like N terminal domain
AL549_RS08240	PF01521	Iron-sulphur cluster biosynthesis
AL549_RS08245	PF00226	DnaJ domain
AL549_RS08245	PF07743	HSCB C-terminal oligomerisation domain
AL549_RS08250	PF00012	Hsp70 protein
AL549_RS08255	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL549_RS08260	PF04384	Iron-sulphur cluster assembly
AL549_RS08265	PF00883	Cytosol aminopeptidase family, catalytic domain
AL549_RS08265	PF12404	AL549_RS08265
AL549_RS08270	PF00334	Nucleoside diphosphate kinase
AL549_RS08275	PF04055	Radical SAM superfamily
AL549_RS08280	PF13413	Helix-turn-helix domain
AL549_RS08280	PF13464	AL549_RS08280
AL549_RS08285	PF04551	GcpE protein
AL549_RS08290	PF03129	Anticodon binding domain
AL549_RS08290	PF13393	Histidyl-tRNA synthetase
AL549_RS08295	PF09976	Tetratricopeptide repeat
AL549_RS08300	PF13360	PQQ-like domain
AL549_RS08305	PF01926	50S ribosome-binding GTPase
AL549_RS08305	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
AL549_RS08315	PF00990	GGDEF domain
AL549_RS08315	PF13185	GAF domain
AL549_RS08320	PF07191	zinc-ribbons
AL549_RS08325	PF02601	AL549_RS08325
AL549_RS08325	PF13742	AL549_RS08325
AL549_RS08330	PF00478	IMP dehydrogenase / GMP reductase domain
AL549_RS08330	PF00571	CBS domain
AL549_RS08335	PF00117	Glutamine amidotransferase class-I
AL549_RS08335	PF00958	GMP synthase C terminal domain
AL549_RS08335	PF02540	NAD synthase
AL549_RS08340	PF00182	Chitinase class I
AL549_RS08340	PF02839	Carbohydrate binding domain
AL549_RS08345	PF01184	AL549_RS08345
AL549_RS08350	PF01235	AL549_RS08350
AL549_RS08355	PF01266	FAD dependent oxidoreductase
AL549_RS08360	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS08360	PF03466	LysR substrate binding domain
AL549_RS08365	PF00805	Pentapeptide repeats (8 copies)
AL549_RS08365	PF07885	Ion channel
AL549_RS08370	PF02028	BCCT family transporter
AL549_RS08375	PF09335	AL549_RS08375
AL549_RS08380	PF01300	Telomere recombination
AL549_RS08380	PF03481	Putative GTP-binding controlling metal-binding
AL549_RS08385	PF09335	AL549_RS08385
AL549_RS08390	PF02222	ATP-grasp domain
AL549_RS08400	PF05742	AL549_RS08400
AL549_RS08405	PF04945	YHS domain
AL549_RS08410	PF01553	Acyltransferase
AL549_RS08410	PF13444	Acetyltransferase (GNAT) domain
AL549_RS08415	PF01381	Helix-turn-helix
AL549_RS08420	PF07804	HipA-like C-terminal domain
AL549_RS08430	PF01668	SmpB protein
AL549_RS08435	PF03364	Polyketide cyclase / dehydrase and lipid transport
AL549_RS08440	PF03658	RnfH family Ubiquitin
AL549_RS08445	PF04355	SmpA / OmlA family
AL549_RS08450	PF02463	RecF/RecN/SMC N terminal domain
AL549_RS08455	PF01513	ATP-NAD kinase
AL549_RS08460	PF01025	GrpE
AL549_RS08465	PF00375	Sodium:dicarboxylate symporter family
AL549_RS08480	PF01297	Periplasmic solute binding protein family
AL549_RS08485	PF00950	AL549_RS08485
AL549_RS08490	PF00012	Hsp70 protein
AL549_RS08495	PF00226	DnaJ domain
AL549_RS08495	PF00684	DnaJ central domain
AL549_RS08495	PF01556	DnaJ C terminal domain
AL549_RS08500	PF07963	Prokaryotic N-terminal methylation motif
AL549_RS08500	PF16732	AL549_RS08500
AL549_RS08505	PF07963	Prokaryotic N-terminal methylation motif
AL549_RS08505	PF12019	Type II transport protein GspH
AL549_RS08520	PF07963	Prokaryotic N-terminal methylation motif
AL549_RS08525	PF03806	AL549_RS08525
AL549_RS08530	PF00756	Putative esterase
AL549_RS08535	PF00107	Zinc-binding dehydrogenase
AL549_RS08535	PF08240	Alcohol dehydrogenase GroES-like domain
AL549_RS08540	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS08540	PF03466	LysR substrate binding domain
AL549_RS08545	PF14437	AL549_RS08545
AL549_RS08555	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS08555	PF01464	Transglycosylase SLT domain
AL549_RS08560	PF02769	AIR synthase related protein, C-terminal domain
AL549_RS08560	PF13507	CobB/CobQ-like glutamine amidotransferase domain
AL549_RS08565	PF12286	AL549_RS08565
AL549_RS08575	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL549_RS08580	PF11810	AL549_RS08580
AL549_RS08585	PF01546	Peptidase family M20/M25/M40
AL549_RS08585	PF07687	Peptidase dimerisation domain
AL549_RS08590	PF00860	Permease family
AL549_RS08595	PF00156	Phosphoribosyl transferase domain
AL549_RS08600	PF06500	Alpha/beta hydrolase of unknown function (DUF1100)
AL549_RS08605	PF07417	Transcriptional regulator Crl
AL549_RS08610	PF00696	Amino acid kinase family
AL549_RS08610	PF01472	PUA domain
AL549_RS08615	PF00171	Aldehyde dehydrogenase family
AL549_RS08620	PF03477	ATP cone domain
AL549_RS08625	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL549_RS08625	PF01872	RibD C-terminal domain
AL549_RS08630	PF00677	Lumazine binding domain
AL549_RS08635	PF00925	GTP cyclohydrolase II
AL549_RS08635	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AL549_RS08640	PF00885	6,7-dimethyl-8-ribityllumazine synthase
AL549_RS08645	PF01029	NusB family
AL549_RS08650	PF00586	AIR synthase related protein, N-terminal domain
AL549_RS08650	PF02769	AIR synthase related protein, C-terminal domain
AL549_RS08655	PF04608	Phosphatidylglycerophosphatase A
AL549_RS08660	PF02779	Transketolase, pyrimidine binding domain
AL549_RS08660	PF02780	Transketolase, C-terminal domain
AL549_RS08660	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
AL549_RS08665	PF00348	Polyprenyl synthetase
AL549_RS08670	PF02609	Exonuclease VII small subunit
AL549_RS08675	PF01618	AL549_RS08675
AL549_RS08680	PF00691	OmpA family
AL549_RS08680	PF13677	AL549_RS08680
AL549_RS08685	PF02568	Thiamine biosynthesis protein (ThiI)
AL549_RS08685	PF02926	THUMP domain
AL549_RS08690	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS08690	PF03466	LysR substrate binding domain
AL549_RS08695	PF12697	Alpha/beta hydrolase family
AL549_RS08700	PF04241	AL549_RS08700
AL549_RS08705	PF01728	FtsJ-like methyltransferase
AL549_RS08710	PF01223	DNA/RNA non-specific endonuclease
AL549_RS08715	PF01367	5'-3' exonuclease, C-terminal SAM fold
AL549_RS08715	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AL549_RS08720	PF03641	Possible lysine decarboxylase
AL549_RS08720	PF11892	Domain of unknown function (DUF3412)
AL549_RS08720	PF14793	Domain of unknown function (DUF4478)
AL549_RS08725	PF00990	GGDEF domain
AL549_RS08730	PF13424	Tetratricopeptide repeat
AL549_RS08735	PF14489	QueF-like protein
AL549_RS08735	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
AL549_RS08740	PF07348	Syd protein (SUKH-2)
AL549_RS08745	PF10071	AL549_RS08745
AL549_RS08750	PF03180	NLPA lipoprotein
AL549_RS08755	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS08760	PF00005	ABC transporter
AL549_RS08760	PF09383	NIL domain
AL549_RS08765	PF13242	HAD-hyrolase-like
AL549_RS08770	PF00356	Bacterial regulatory proteins, lacI family
AL549_RS08770	PF13377	Periplasmic binding protein-like domain
AL549_RS08775	PF00367	phosphotransferase system, EIIB
AL549_RS08775	PF02378	Phosphotransferase system, EIIC
AL549_RS08780	PF00128	Alpha amylase, catalytic domain
AL549_RS08780	PF16657	AL549_RS08780
AL549_RS08785	PF02588	AL549_RS08785
AL549_RS08790	PF00464	Serine hydroxymethyltransferase
AL549_RS08800	PF04055	Radical SAM superfamily
AL549_RS08800	PF16881	AL549_RS08800
AL549_RS08805	PF03099	Biotin/lipoate A/B protein ligase family
AL549_RS08810	PF04359	Protein of unknown function (DUF493)
AL549_RS08815	PF00768	D-alanyl-D-alanine carboxypeptidase
AL549_RS08815	PF07943	Penicillin-binding protein 5, C-terminal domain
AL549_RS08820	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
AL549_RS08820	PF05036	Sporulation related domain
AL549_RS08825	PF01098	AL549_RS08825
AL549_RS08830	PF00905	Penicillin binding protein transpeptidase domain
AL549_RS08830	PF03717	Penicillin-binding Protein dimerisation domain
AL549_RS08835	PF02590	Predicted SPOUT methyltransferase
AL549_RS08840	PF02410	Oligomerisation domain
AL549_RS08845	PF06144	DNA polymerase III, delta subunit
AL549_RS08845	PF14840	Processivity clamp loader gamma complex DNA pol III C-term
AL549_RS08850	PF04390	Lipopolysaccharide-assembly
AL549_RS08855	PF00133	tRNA synthetases class I (I, L, M and V)
AL549_RS08855	PF08264	Anticodon-binding domain of tRNA
AL549_RS08855	PF13603	Leucyl-tRNA synthetase, Domain 2
AL549_RS08860	PF07295	AL549_RS08860
AL549_RS08865	PF00795	Carbon-nitrogen hydrolase
AL549_RS08870	PF00571	CBS domain
AL549_RS08870	PF03471	Transporter associated domain
AL549_RS08875	PF02130	Uncharacterized protein family UPF0054
AL549_RS08880	PF02562	PhoH-like protein
AL549_RS08885	PF00919	Uncharacterized protein family UPF0004
AL549_RS08885	PF01938	TRAM domain
AL549_RS08885	PF04055	Radical SAM superfamily
AL549_RS08890	PF01494	FAD binding domain
AL549_RS08975	PF01926	50S ribosome-binding GTPase
AL549_RS08975	PF06071	Protein of unknown function (DUF933)
AL549_RS08980	PF01195	Peptidyl-tRNA hydrolase
AL549_RS08985	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
AL549_RS08985	PF14572	Phosphoribosyl synthetase-associated domain
AL549_RS08990	PF00288	GHMP kinases N terminal domain
AL549_RS08990	PF08544	GHMP kinases C terminal
AL549_RS08995	PF03550	Outer membrane lipoprotein LolB
AL549_RS09000	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
AL549_RS09000	PF01488	Shikimate / quinate 5-dehydrogenase
AL549_RS09000	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
AL549_RS09005	PF00472	RF-1 domain
AL549_RS09005	PF03462	PCRF domain
AL549_RS09010	PF13847	Methyltransferase domain
AL549_RS09015	PF04247	AL549_RS09015
AL549_RS09020	PF13369	AL549_RS09020
AL549_RS09020	PF13371	Tetratricopeptide repeat
AL549_RS09025	PF00793	DAHP synthetase I family
AL549_RS09030	PF00149	Calcineurin-like phosphoesterase
AL549_RS09030	PF02872	5'-nucleotidase, C-terminal domain
AL549_RS09035	PF04073	Aminoacyl-tRNA editing domain
AL549_RS09040	PF00849	RNA pseudouridylate synthase
AL549_RS09040	PF01479	S4 domain
AL549_RS09045	PF01713	Smr domain
AL549_RS09050	PF11346	AL549_RS09050
AL549_RS09060	PF01963	AL549_RS09060
AL549_RS09065	PF00728	Glycosyl hydrolase family 20, catalytic domain
AL549_RS09065	PF02838	Glycosyl hydrolase family 20, domain 2
AL549_RS09065	PF03173	Putative carbohydrate binding domain
AL549_RS09065	PF03174	Chitobiase/beta-hexosaminidase C-terminal domain
AL549_RS09070	PF04214	AL549_RS09070
AL549_RS09075	PF00122	E1-E2 ATPase
AL549_RS09075	PF00403	Heavy-metal-associated domain
AL549_RS09075	PF00702	haloacid dehalogenase-like hydrolase
AL549_RS09080	PF13609	Gram-negative porin
AL549_RS09085	PF09829	AL549_RS09085
AL549_RS09090	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL549_RS09105	PF16538	AL549_RS09105
AL549_RS09105	PF16539	AL549_RS09105
AL549_RS09105	PF16548	AL549_RS09105
AL549_RS09115	PF02169	LPP20 lipoprotein
AL549_RS09120	PF01609	Transposase DDE domain
AL549_RS09120	PF13006	AL549_RS09120
AL549_RS09125	PF05130	FlgN protein
AL549_RS09130	PF04316	Anti-sigma-28 factor, FlgM
AL549_RS09135	PF13144	SAF-like
AL549_RS09140	PF00072	Response regulator receiver domain
AL549_RS09140	PF01584	CheW-like domain
AL549_RS09145	PF01739	CheR methyltransferase, SAM binding domain
AL549_RS09145	PF03705	CheR methyltransferase, all-alpha domain
AL549_RS09155	PF00460	Flagella basal body rod protein
AL549_RS09155	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL549_RS09160	PF03963	AL549_RS09160
AL549_RS09160	PF13860	FlgD Ig-like domain
AL549_RS09160	PF13861	FlgD Tudor-like domain
AL549_RS09165	PF00460	Flagella basal body rod protein
AL549_RS09165	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL549_RS09165	PF07559	Flagellar basal body protein FlaE
AL549_RS09170	PF00460	Flagella basal body rod protein
AL549_RS09170	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL549_RS09175	PF00460	Flagella basal body rod protein
AL549_RS09175	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL549_RS09180	PF02107	AL549_RS09180
AL549_RS09185	PF02119	AL549_RS09185
AL549_RS09190	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AL549_RS09190	PF10135	AL549_RS09190
AL549_RS09195	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL549_RS09200	PF00669	Bacterial flagellin N-terminal helical region
AL549_RS09205	PF00669	Bacterial flagellin N-terminal helical region
AL549_RS09205	PF00700	Bacterial flagellin C-terminal helical region
AL549_RS09205	PF07196	Flagellin hook IN motif
AL549_RS09210	PF00669	Bacterial flagellin N-terminal helical region
AL549_RS09210	PF00700	Bacterial flagellin C-terminal helical region
AL549_RS09210	PF07196	Flagellin hook IN motif
AL549_RS09215	PF00669	Bacterial flagellin N-terminal helical region
AL549_RS09215	PF00700	Bacterial flagellin C-terminal helical region
AL549_RS09215	PF07196	Flagellin hook IN motif
AL549_RS09220	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
AL549_RS09225	PF00391	PEP-utilising enzyme, mobile domain
AL549_RS09225	PF02896	PEP-utilising enzyme, TIM barrel domain
AL549_RS09225	PF05524	PEP-utilising enzyme, N-terminal
AL549_RS09230	PF00381	PTS HPr component phosphorylation site
AL549_RS09235	PF00291	Pyridoxal-phosphate dependent enzyme
AL549_RS09240	PF07264	Etoposide-induced protein 2
AL549_RS09245	PF04354	ZipA, C-terminal FtsZ-binding domain
AL549_RS09250	PF00533	BRCA1 C Terminus (BRCT) domain
AL549_RS09250	PF01653	NAD-dependent DNA ligase adenylation domain
AL549_RS09250	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
AL549_RS09250	PF03120	NAD-dependent DNA ligase OB-fold domain
AL549_RS09250	PF12826	Helix-hairpin-helix motif
AL549_RS09250	PF14520	Helix-hairpin-helix domain
AL549_RS09265	PF01957	NfeD-like C-terminal, partner-binding
AL549_RS09270	PF01145	SPFH domain / Band 7 family
AL549_RS09270	PF16200	AL549_RS09270
AL549_RS09275	PF00085	Thioredoxin
AL549_RS09275	PF14559	Tetratricopeptide repeat
AL549_RS09275	PF14561	Tetratricopeptide repeat
AL549_RS09285	PF00106	short chain dehydrogenase
AL549_RS09290	PF01370	NAD dependent epimerase/dehydratase family
AL549_RS09290	PF08338	Domain of unknown function (DUF1731)
AL549_RS09295	PF07556	AL549_RS09295
AL549_RS09300	PF07556	AL549_RS09300
AL549_RS09310	PF00571	CBS domain
AL549_RS09315	PF12850	Calcineurin-like phosphoesterase superfamily domain
AL549_RS09320	PF10262	Rdx family
AL549_RS09325	PF01925	AL549_RS09325
AL549_RS09330	PF17323	AL549_RS09330
AL549_RS09335	PF00486	Transcriptional regulatory protein, C terminal
AL549_RS09340	PF00183	Hsp90 protein
AL549_RS09340	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS09345	PF00406	Adenylate kinase
AL549_RS09345	PF05191	Adenylate kinase, active site lid
AL549_RS09350	PF00762	Ferrochelatase
AL549_RS09355	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS09360	PF00854	POT family
AL549_RS09365	PF02357	Transcription termination factor nusG
AL549_RS09370	PF00733	Asparagine synthase
AL549_RS09370	PF13537	Glutamine amidotransferase domain
AL549_RS09375	PF00999	Sodium/hydrogen exchanger family
AL549_RS09375	PF02254	TrkA-N domain
AL549_RS09380	PF00480	ROK family
AL549_RS09385	PF01979	Amidohydrolase family
AL549_RS09390	PF00367	phosphotransferase system, EIIB
AL549_RS09390	PF02378	Phosphotransferase system, EIIC
AL549_RS09395	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL549_RS09395	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
AL549_RS09400	PF01475	Ferric uptake regulator family
AL549_RS09405	PF14539	Domain of unknown function (DUF4442)
AL549_RS09410	PF00258	Flavodoxin
AL549_RS09415	PF10981	AL549_RS09415
AL549_RS09420	PF12697	Alpha/beta hydrolase family
AL549_RS09425	PF03925	SeqA protein
AL549_RS09425	PF17206	AL549_RS09425
AL549_RS09430	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL549_RS09430	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL549_RS09430	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL549_RS09430	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL549_RS09435	PF08348	AL549_RS09435
AL549_RS09435	PF13309	AL549_RS09435
AL549_RS09440	PF01042	Endoribonuclease L-PSP
AL549_RS09445	PF00375	Sodium:dicarboxylate symporter family
AL549_RS09450	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL549_RS09450	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_RS09455	PF08907	AL549_RS09455
AL549_RS09460	PF01784	NIF3 (NGG1p interacting factor 3)
AL549_RS09465	PF00285	Citrate synthase
AL549_RS09470	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AL549_RS09480	PF00890	FAD binding domain
AL549_RS09480	PF02910	Fumarate reductase flavoprotein C-term
AL549_RS09485	PF13085	2Fe-2S iron-sulfur cluster binding domain
AL549_RS09485	PF13534	4Fe-4S dicluster domain
AL549_RS09490	PF00676	Dehydrogenase E1 component
AL549_RS09490	PF02779	Transketolase, pyrimidine binding domain
AL549_RS09490	PF16078	AL549_RS09490
AL549_RS09490	PF16870	AL549_RS09490
AL549_RS09495	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AL549_RS09495	PF00364	Biotin-requiring enzyme
AL549_RS09495	PF02817	e3 binding domain
AL549_RS09500	PF00549	CoA-ligase
AL549_RS09500	PF08442	ATP-grasp domain
AL549_RS09505	PF00549	CoA-ligase
AL549_RS09505	PF02629	CoA binding domain
AL549_RS09510	PF00950	AL549_RS09510
AL549_RS09515	PF00005	ABC transporter
AL549_RS09520	PF01297	Periplasmic solute binding protein family
AL549_RS09525	PF12833	Helix-turn-helix domain
AL549_RS09530	PF04023	FeoA domain
AL549_RS09535	PF02421	Ferrous iron transport protein B
AL549_RS09535	PF07664	AL549_RS09535
AL549_RS09535	PF07670	Nucleoside recognition
AL549_RS09540	PF09012	FeoC like transcriptional regulator
AL549_RS09545	PF01230	HIT domain
AL549_RS09550	PF00750	tRNA synthetases class I (R)
AL549_RS09550	PF03485	Arginyl tRNA synthetase N terminal domain
AL549_RS09550	PF05746	DALR anticodon binding domain
AL549_RS09555	PF06185	YecM protein
AL549_RS09560	PF00551	Formyl transferase
AL549_RS09560	PF01842	ACT domain
AL549_RS09570	PF04851	Type III restriction enzyme, res subunit
AL549_RS09570	PF13307	Helicase C-terminal domain
AL549_RS09575	PF00814	Glycoprotease family
AL549_RS09585	PF03843	AL549_RS09585
AL549_RS09590	PF00561	alpha/beta hydrolase fold
AL549_RS09595	PF00501	AMP-binding enzyme
AL549_RS09595	PF13193	AMP-binding enzyme C-terminal domain
AL549_RS09600	PF00570	HRDC domain
AL549_RS09600	PF01612	3'-5' exonuclease
AL549_RS09605	PF03776	Septum formation topological specificity factor MinE
AL549_RS09610	PF13614	AAA domain
AL549_RS09615	PF03775	Septum formation inhibitor MinC, C-terminal domain
AL549_RS09615	PF05209	Septum formation inhibitor MinC, N-terminal domain
AL549_RS09620	PF05166	YcgL domain
AL549_RS09625	PF13406	Transglycosylase SLT domain
AL549_RS09630	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS09630	PF03466	LysR substrate binding domain
AL549_RS09635	PF01773	Na+ dependent nucleoside transporter N-terminus
AL549_RS09635	PF07662	Na+ dependent nucleoside transporter C-terminus
AL549_RS09635	PF07670	Nucleoside recognition
AL549_RS09645	PF00072	Response regulator receiver domain
AL549_RS09645	PF00486	Transcriptional regulatory protein, C terminal
AL549_RS09650	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS09660	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL549_RS09660	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL549_RS09665	PF13561	Enoyl-(Acyl carrier protein) reductase
AL549_RS09675	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL549_RS09675	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL549_RS09680	PF11659	AL549_RS09680
AL549_RS09685	PF03176	MMPL family
AL549_RS09690	PF03548	Outer membrane lipoprotein carrier protein LolA
AL549_RS09695	PF13279	Thioesterase-like superfamily
AL549_RS09700	PF00221	Aromatic amino acid lyase
AL549_RS09705	PF00535	Glycosyl transferase family 2
AL549_RS09705	PF03279	AL549_RS09705
AL549_RS09715	PF00501	AMP-binding enzyme
AL549_RS09720	PF04279	AL549_RS09720
AL549_RS09725	PF00550	Phosphopantetheine attachment site
AL549_RS09730	PF00550	Phosphopantetheine attachment site
AL549_RS09735	PF01553	Acyltransferase
AL549_RS09740	PF13723	AL549_RS09740
AL549_RS09750	PF00891	O-methyltransferase
AL549_RS09755	PF01494	FAD binding domain
AL549_RS09760	PF05547	AL549_RS09760
AL549_RS09770	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS09770	PF00672	HAMP domain
AL549_RS09775	PF02696	AL549_RS09775
AL549_RS09780	PF00072	Response regulator receiver domain
AL549_RS09780	PF00486	Transcriptional regulatory protein, C terminal
AL549_RS09785	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS09790	PF01547	Bacterial extracellular solute-binding protein
AL549_RS09795	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS09800	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS09805	PF00005	ABC transporter
AL549_RS09810	PF03480	Bacterial extracellular solute-binding protein, family 7
AL549_RS09815	PF04290	AL549_RS09815
AL549_RS09820	PF06808	AL549_RS09820
AL549_RS09825	PF12969	Domain of Unknown Function with PDB structure (DUF3857)
AL549_RS09830	PF00072	Response regulator receiver domain
AL549_RS09830	PF00158	Sigma-54 interaction domain
AL549_RS09830	PF02954	Bacterial regulatory protein, Fis family
AL549_RS09835	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS09835	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS09835	PF02743	Cache domain
AL549_RS09840	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL549_RS09840	PF05697	Bacterial trigger factor protein (TF)
AL549_RS09840	PF05698	Bacterial trigger factor protein (TF) C-terminus
AL549_RS09845	PF00574	Clp protease
AL549_RS09850	PF06689	ClpX C4-type zinc finger
AL549_RS09850	PF07724	AAA domain (Cdc48 subfamily)
AL549_RS09850	PF10431	C-terminal, D2-small domain, of ClpB protein
AL549_RS09855	PF00004	ATPase family associated with various cellular activities (AAA)
AL549_RS09855	PF02190	ATP-dependent protease La (LON) domain
AL549_RS09855	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL549_RS09860	PF00216	Bacterial DNA-binding protein
AL549_RS09865	PF13616	PPIC-type PPIASE domain
AL549_RS09865	PF13624	SurA N-terminal domain
AL549_RS09870	PF12836	Helix-hairpin-helix motif
AL549_RS09875	PF01694	Rhomboid family
AL549_RS09880	PF03942	AL549_RS09880
AL549_RS09885	PF01966	HD domain
AL549_RS09885	PF13286	Phosphohydrolase-associated domain
AL549_RS09890	PF13023	HD domain
AL549_RS09895	PF00155	Aminotransferase class I and II
AL549_RS09900	PF00425	chorismate binding enzyme
AL549_RS09905	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL549_RS09905	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL549_RS09905	PF16582	AL549_RS09905
AL549_RS09910	PF12697	Alpha/beta hydrolase family
AL549_RS09915	PF00378	Enoyl-CoA hydratase/isomerase family
AL549_RS09920	PF13378	Enolase C-terminal domain-like
AL549_RS09925	PF00501	AMP-binding enzyme
AL549_RS09930	PF03601	AL549_RS09930
AL549_RS09935	PF01553	Acyltransferase
AL549_RS09935	PF07690	Major Facilitator Superfamily
AL549_RS09940	PF13305	WHG domain
AL549_RS09945	PF04280	Tim44-like domain
AL549_RS09945	PF07466	AL549_RS09945
AL549_RS09980	PF16576	AL549_RS09980
AL549_RS09985	PF00873	AcrB/AcrD/AcrF family
AL549_RS09990	PF13505	Outer membrane protein beta-barrel domain
AL549_RS09995	PF06844	Protein of unknown function (DUF1244)
AL549_RS10000	PF00291	Pyridoxal-phosphate dependent enzyme
AL549_RS10005	PF01037	AsnC family
AL549_RS10005	PF13412	Winged helix-turn-helix DNA-binding
AL549_RS10015	PF13622	Thioesterase-like superfamily
AL549_RS10020	PF09619	Type III secretion system lipoprotein chaperone (YscW)
AL549_RS10025	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AL549_RS10035	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS10035	PF00990	GGDEF domain
AL549_RS10045	PF07969	Amidohydrolase family
AL549_RS10060	PF16130	AL549_RS10060
AL549_RS10065	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS10065	PF17201	AL549_RS10065
AL549_RS10070	PF01263	Aldose 1-epimerase
AL549_RS10075	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL549_RS10075	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL549_RS10080	PF01641	SelR domain
AL549_RS10085	PF11207	AL549_RS10085
AL549_RS10090	PF07023	AL549_RS10090
AL549_RS10095	PF00710	Asparaginase
AL549_RS10100	PF01343	Peptidase family S49
AL549_RS10105	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL549_RS10105	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_RS10110	PF00881	Nitroreductase family
AL549_RS10115	PF01131	DNA topoisomerase
AL549_RS10115	PF01751	Toprim domain
AL549_RS10120	PF00850	Histone deacetylase domain
AL549_RS10125	PF00072	Response regulator receiver domain
AL549_RS10125	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS10125	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS10125	PF08447	PAS fold
AL549_RS10130	PF00072	Response regulator receiver domain
AL549_RS10130	PF00990	GGDEF domain
AL549_RS10135	PF13091	PLD-like domain
AL549_RS10140	PF04074	Domain of unknown function (DUF386)
AL549_RS10145	PF02386	Cation transport protein
AL549_RS10150	PF02080	TrkA-C domain
AL549_RS10150	PF02254	TrkA-N domain
AL549_RS10160	PF00884	Sulfatase
AL549_RS10160	PF11893	AL549_RS10160
AL549_RS10165	PF07208	Protein of unknown function (DUF1414)
AL549_RS10170	PF04245	AL549_RS10170
AL549_RS10175	PF01627	Hpt domain
AL549_RS10185	PF03553	AL549_RS10185
AL549_RS10190	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL549_RS10190	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL549_RS10195	PF07963	Prokaryotic N-terminal methylation motif
AL549_RS10200	PF00520	Ion transport protein
AL549_RS10205	PF01914	AL549_RS10205
AL549_RS10210	PF00171	Aldehyde dehydrogenase family
AL549_RS10210	PF00465	Iron-containing alcohol dehydrogenase
AL549_RS10215	PF00106	short chain dehydrogenase
AL549_RS10220	PF11993	AL549_RS10220
AL549_RS10225	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AL549_RS10225	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AL549_RS10230	PF00462	Glutaredoxin
AL549_RS10235	PF13743	Thioredoxin
AL549_RS10240	PF03553	AL549_RS10240
AL549_RS10240	PF13726	AL549_RS10240
AL549_RS10245	PF00929	Exonuclease
AL549_RS10250	PF00691	OmpA family
AL549_RS10255	PF10952	AL549_RS10255
AL549_RS10260	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_RS10265	PF00633	Helix-hairpin-helix motif
AL549_RS10265	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL549_RS10265	PF10576	Iron-sulfur binding domain of endonuclease III
AL549_RS10270	PF02508	AL549_RS10270
AL549_RS10275	PF04205	FMN-binding domain
AL549_RS10280	PF03116	AL549_RS10280
AL549_RS10285	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
AL549_RS10285	PF10531	SLBB domain
AL549_RS10285	PF12838	4Fe-4S dicluster domain
AL549_RS10285	PF13375	RnfC Barrel sandwich hybrid domain
AL549_RS10290	PF04060	Putative Fe-S cluster
AL549_RS10290	PF14697	4Fe-4S dicluster domain
AL549_RS10295	PF02508	AL549_RS10295
AL549_RS10305	PF00271	Helicase conserved C-terminal domain
AL549_RS10305	PF02151	UvrB/uvrC motif
AL549_RS10305	PF04851	Type III restriction enzyme, res subunit
AL549_RS10305	PF12344	Ultra-violet resistance protein B
AL549_RS10310	PF00072	Response regulator receiver domain
AL549_RS10310	PF00158	Sigma-54 interaction domain
AL549_RS10310	PF02954	Bacterial regulatory protein, Fis family
AL549_RS10315	PF01627	Hpt domain
AL549_RS10320	PF01933	Uncharacterised protein family UPF0052
AL549_RS10325	PF04055	Radical SAM superfamily
AL549_RS10325	PF06463	Molybdenum Cofactor Synthesis C
AL549_RS10325	PF13353	4Fe-4S single cluster domain
AL549_RS10330	PF00994	Probable molybdopterin binding domain
AL549_RS10335	PF01967	MoaC family
AL549_RS10340	PF02597	ThiS family
AL549_RS10345	PF02391	MoaE protein
AL549_RS10350	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_RS10355	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS10360	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS10360	PF12911	AL549_RS10360
AL549_RS10365	PF00005	ABC transporter
AL549_RS10365	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_RS10370	PF00005	ABC transporter
AL549_RS10370	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_RS10375	PF13409	Glutathione S-transferase, N-terminal domain
AL549_RS10375	PF13410	Glutathione S-transferase, C-terminal domain
AL549_RS10380	PF16549	AL549_RS10380
AL549_RS10385	PF03795	YCII-related domain
AL549_RS10390	PF03061	Thioesterase superfamily
AL549_RS10395	PF04279	AL549_RS10395
AL549_RS10405	PF00375	Sodium:dicarboxylate symporter family
AL549_RS10410	PF00290	Tryptophan synthase alpha chain
AL549_RS10415	PF00291	Pyridoxal-phosphate dependent enzyme
AL549_RS10420	PF00218	Indole-3-glycerol phosphate synthase
AL549_RS10420	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
AL549_RS10425	PF00591	Glycosyl transferase family, a/b domain
AL549_RS10425	PF02885	Glycosyl transferase family, helical bundle domain
AL549_RS10430	PF00117	Glutamine amidotransferase class-I
AL549_RS10435	PF00425	chorismate binding enzyme
AL549_RS10435	PF04715	Anthranilate synthase component I, N terminal region
AL549_RS10440	PF08056	AL549_RS10440
AL549_RS10445	PF02811	PHP domain
AL549_RS10450	PF01300	Telomere recombination
AL549_RS10455	PF00353	Hemolysin-type calcium-binding repeat (2 copies)
AL549_RS10460	PF00849	RNA pseudouridylate synthase
AL549_RS10460	PF01479	S4 domain
AL549_RS10465	PF04269	Protein of unknown function, DUF440
AL549_RS10470	PF01132	Elongation factor P (EF-P) OB domain
AL549_RS10470	PF08207	Elongation factor P (EF-P) KOW-like domain
AL549_RS10470	PF09285	Elongation factor P, C-terminal
AL549_RS10475	PF01909	Nucleotidyltransferase domain
AL549_RS10480	PF00563	EAL domain
AL549_RS10480	PF02378	Phosphotransferase system, EIIC
AL549_RS10485	PF00136	DNA polymerase family B
AL549_RS10485	PF03104	DNA polymerase family B, exonuclease domain
AL549_RS10490	PF00072	Response regulator receiver domain
AL549_RS10490	PF00196	Bacterial regulatory proteins, luxR family
AL549_RS10495	PF01541	GIY-YIG catalytic domain
AL549_RS10495	PF02151	UvrB/uvrC motif
AL549_RS10495	PF08459	UvrC Helix-hairpin-helix N-terminal
AL549_RS10495	PF14520	Helix-hairpin-helix domain
AL549_RS10500	PF01066	CDP-alcohol phosphatidyltransferase
AL549_RS10525	PF00202	Aminotransferase class-III
AL549_RS10525	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AL549_RS10530	PF03435	Saccharopine dehydrogenase
AL549_RS10530	PF16653	AL549_RS10530
AL549_RS10540	PF13740	ACT domain
AL549_RS10545	PF13084	AL549_RS10545
AL549_RS10550	PF00994	Probable molybdopterin binding domain
AL549_RS10555	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL549_RS10560	PF00268	Ribonucleotide reductase, small chain
AL549_RS10565	PF00317	Ribonucleotide reductase, all-alpha domain
AL549_RS10565	PF02867	Ribonucleotide reductase, barrel domain
AL549_RS10565	PF03477	ATP cone domain
AL549_RS10570	PF13489	Methyltransferase domain
AL549_RS10580	PF00521	DNA gyrase/topoisomerase IV, subunit A
AL549_RS10580	PF03989	DNA gyrase C-terminal domain, beta-propeller
AL549_RS10595	PF02335	Cytochrome c552
AL549_RS10600	PF09699	Doubled CXXCH motif (Paired_CXXCH_1)
AL549_RS10600	PF13435	Cytochrome c554 and c-prime
AL549_RS10605	PF12800	4Fe-4S binding domain
AL549_RS10605	PF13247	4Fe-4S dicluster domain
AL549_RS10610	PF03916	AL549_RS10610
AL549_RS10615	PF01578	AL549_RS10615
AL549_RS10615	PF16327	AL549_RS10615
AL549_RS10620	PF08534	Redoxin
AL549_RS10625	PF03918	Cytochrome C biogenesis protein
AL549_RS10635	PF01588	Putative tRNA binding domain
AL549_RS10635	PF09334	tRNA synthetases class I (M)
AL549_RS10640	PF10609	ParA/MinD ATPase like
AL549_RS10645	PF00485	Phosphoribulokinase / Uridine kinase family
AL549_RS10650	PF05170	AL549_RS10650
AL549_RS10655	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS10660	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
AL549_RS10665	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AL549_RS10670	PF00916	AL549_RS10670
AL549_RS10670	PF01740	STAS domain
AL549_RS10675	PF00575	S1 RNA binding domain
AL549_RS10675	PF10150	Ribonuclease E/G family
AL549_RS10680	PF00849	RNA pseudouridylate synthase
AL549_RS10680	PF01479	S4 domain
AL549_RS10685	PF02545	Maf-like protein
AL549_RS10690	PF02620	AL549_RS10690
AL549_RS10695	PF01783	Ribosomal L32p protein family
AL549_RS10700	PF02504	Fatty acid synthesis protein
AL549_RS10705	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AL549_RS10705	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL549_RS10710	PF00698	Acyl transferase domain
AL549_RS10715	PF13561	Enoyl-(Acyl carrier protein) reductase
AL549_RS10720	PF00550	Phosphopantetheine attachment site
AL549_RS10725	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL549_RS10725	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL549_RS10730	PF01063	Aminotransferase class IV
AL549_RS10735	PF02618	YceG-like family
AL549_RS10740	PF02223	Thymidylate kinase
AL549_RS10745	PF09115	DNA polymerase III, delta subunit, C terminal
AL549_RS10745	PF13177	DNA polymerase III, delta subunit
AL549_RS10750	PF01026	TatD related DNase
AL549_RS10755	PF00367	phosphotransferase system, EIIB
AL549_RS10755	PF02378	Phosphotransferase system, EIIC
AL549_RS10770	PF00209	Sodium:neurotransmitter symporter family
AL549_RS10785	PF01734	Patatin-like phospholipase
AL549_RS10790	PF00224	Pyruvate kinase, barrel domain
AL549_RS10790	PF02887	Pyruvate kinase, alpha/beta domain
AL549_RS10795	PF00480	ROK family
AL549_RS10800	PF00072	Response regulator receiver domain
AL549_RS10800	PF01584	CheW-like domain
AL549_RS10805	PF01336	OB-fold nucleic acid binding domain
AL549_RS10805	PF02811	PHP domain
AL549_RS10805	PF07733	Bacterial DNA polymerase III alpha subunit
AL549_RS10805	PF14579	Helix-hairpin-helix motif
AL549_RS10810	PF00817	impB/mucB/samB family
AL549_RS10820	PF00106	short chain dehydrogenase
AL549_RS10825	PF01343	Peptidase family S49
AL549_RS10825	PF08496	AL549_RS10825
AL549_RS10830	PF02224	Cytidylate kinase
AL549_RS10835	PF00575	S1 RNA binding domain
AL549_RS10840	PF00216	Bacterial DNA-binding protein
AL549_RS10845	PF06305	AL549_RS10845
AL549_RS10850	PF13176	Tetratricopeptide repeat
AL549_RS10850	PF13181	Tetratricopeptide repeat
AL549_RS10855	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL549_RS10860	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS10865	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS10870	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_RS10875	PF00005	ABC transporter
AL549_RS10880	PF00005	ABC transporter
AL549_RS10890	PF16313	AL549_RS10890
AL549_RS10895	PF01609	Transposase DDE domain
AL549_RS10895	PF13006	AL549_RS10895
AL549_RS10900	PF09375	Imelysin
AL549_RS10905	PF06537	AL549_RS10905
AL549_RS10910	PF09375	Imelysin
AL549_RS10915	PF07433	AL549_RS10915
AL549_RS10920	PF01471	Putative peptidoglycan binding domain
AL549_RS10920	PF03734	L,D-transpeptidase catalytic domain
AL549_RS10925	PF05951	AL549_RS10925
AL549_RS10930	PF00753	Metallo-beta-lactamase superfamily
AL549_RS10935	PF11201	AL549_RS10935
AL549_RS10945	PF01609	Transposase DDE domain
AL549_RS10945	PF13006	AL549_RS10945
AL549_RS10950	PF06175	tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)
AL549_RS10960	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS10960	PF03466	LysR substrate binding domain
AL549_RS10965	PF13679	AL549_RS10965
AL549_RS10970	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AL549_RS10970	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
AL549_RS10975	PF01037	AsnC family
AL549_RS10975	PF13412	Winged helix-turn-helix DNA-binding
AL549_RS10980	PF01580	FtsK/SpoIIIE family
AL549_RS10980	PF09397	Ftsk gamma domain
AL549_RS10980	PF13491	AL549_RS10980
AL549_RS10985	PF03548	Outer membrane lipoprotein carrier protein LolA
AL549_RS10990	PF00004	ATPase family associated with various cellular activities (AAA)
AL549_RS10990	PF12002	MgsA AAA+ ATPase C terminal
AL549_RS10990	PF16193	AL549_RS10990
AL549_RS10995	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL549_RS10995	PF02403	Seryl-tRNA synthetase N-terminal domain
AL549_RS11000	PF00202	Aminotransferase class-III
AL549_RS11005	PF04055	Radical SAM superfamily
AL549_RS11005	PF06968	Biotin and Thiamin Synthesis associated domain
AL549_RS11010	PF00155	Aminotransferase class I and II
AL549_RS11015	PF08241	Methyltransferase domain
AL549_RS11020	PF13500	AAA domain
AL549_RS11025	PF01435	Peptidase family M48
AL549_RS11030	PF12680	SnoaL-like domain
AL549_RS11035	PF00106	short chain dehydrogenase
AL549_RS11040	PF01593	Flavin containing amine oxidoreductase
AL549_RS11045	PF07103	AL549_RS11045
AL549_RS11050	PF02353	Mycolic acid cyclopropane synthetase
AL549_RS11055	PF11086	AL549_RS11055
AL549_RS11060	PF16036	AL549_RS11060
AL549_RS11065	PF12915	AL549_RS11065
AL549_RS11075	PF00206	Lyase
AL549_RS11075	PF08328	Adenylosuccinate lyase C-terminal
AL549_RS11080	PF04356	Protein of unknown function (DUF489)
AL549_RS11085	PF03054	tRNA methyl transferase
AL549_RS11095	PF00294	pfkB family carbohydrate kinase
AL549_RS11100	PF00816	H-NS histone family
AL549_RS11105	PF03553	AL549_RS11105
AL549_RS11110	PF01634	ATP phosphoribosyltransferase
AL549_RS11110	PF08029	HisG, C-terminal domain
AL549_RS11115	PF00815	Histidinol dehydrogenase
AL549_RS11120	PF00155	Aminotransferase class I and II
AL549_RS11125	PF00475	Imidazoleglycerol-phosphate dehydratase
AL549_RS11125	PF08645	Polynucleotide kinase 3 phosphatase
AL549_RS11130	PF00117	Glutamine amidotransferase class-I
AL549_RS11135	PF00977	Histidine biosynthesis protein
AL549_RS11140	PF00977	Histidine biosynthesis protein
AL549_RS11145	PF01502	Phosphoribosyl-AMP cyclohydrolase
AL549_RS11145	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
AL549_RS11150	PF02810	SEC-C motif
AL549_RS11155	PF00563	EAL domain
AL549_RS11155	PF08668	HDOD domain
AL549_RS11160	PF00149	Calcineurin-like phosphoesterase
AL549_RS11165	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AL549_RS11170	PF01406	tRNA synthetases class I (C) catalytic domain
AL549_RS11170	PF09190	DALR domain
AL549_RS11175	PF00265	Thymidine kinase
AL549_RS11180	PF02698	DUF218 domain
AL549_RS11185	PF13460	NADH(P)-binding
AL549_RS11190	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS11190	PF03466	LysR substrate binding domain
AL549_RS11195	PF05232	AL549_RS11195
AL549_RS11200	PF06146	AL549_RS11200
AL549_RS11210	PF01226	Formate/nitrite transporter
AL549_RS11215	PF03649	AL549_RS11215
AL549_RS11220	PF06796	AL549_RS11220
AL549_RS11225	PF03264	NapC/NirT cytochrome c family, N-terminal region
AL549_RS11230	PF00384	Molybdopterin oxidoreductase
AL549_RS11230	PF01568	Molydopterin dinucleotide binding domain
AL549_RS11240	PF13609	Gram-negative porin
AL549_RS11245	PF13469	Sulfotransferase family
AL549_RS11250	PF02065	Melibiase
AL549_RS11255	PF11449	AL549_RS11255
AL549_RS11260	PF01368	DHH family
AL549_RS11260	PF02833	DHHA2 domain
AL549_RS11265	PF11042	AL549_RS11265
AL549_RS11270	PF11150	AL549_RS11270
AL549_RS11275	PF00005	ABC transporter
AL549_RS11280	PF00005	ABC transporter
AL549_RS11280	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_RS11285	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS11285	PF12911	AL549_RS11285
AL549_RS11290	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS11295	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_RS11300	PF00158	Sigma-54 interaction domain
AL549_RS11300	PF02954	Bacterial regulatory protein, Fis family
AL549_RS11305	PF04012	AL549_RS11305
AL549_RS11310	PF06667	AL549_RS11310
AL549_RS11315	PF04024	AL549_RS11315
AL549_RS11320	PF16576	AL549_RS11320
AL549_RS11325	PF13437	HlyD family secretion protein
AL549_RS11325	PF13533	Biotin-lipoyl like
AL549_RS11330	PF00873	AcrB/AcrD/AcrF family
AL549_RS11335	PF03352	Methyladenine glycosylase
AL549_RS11340	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL549_RS11345	PF13091	PLD-like domain
AL549_RS11345	PF13396	AL549_RS11345
AL549_RS11350	PF00209	Sodium:neurotransmitter symporter family
AL549_RS11355	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS11355	PF00672	HAMP domain
AL549_RS11360	PF00849	RNA pseudouridylate synthase
AL549_RS11365	PF10672	S-adenosylmethionine-dependent methyltransferase
AL549_RS11370	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL549_RS11370	PF00175	Oxidoreductase NAD-binding domain
AL549_RS11370	PF00970	Oxidoreductase FAD-binding domain
AL549_RS11375	PF03063	Prismane/CO dehydrogenase family
AL549_RS11380	PF00158	Sigma-54 interaction domain
AL549_RS11380	PF02954	Bacterial regulatory protein, Fis family
AL549_RS11385	PF01066	CDP-alcohol phosphatidyltransferase
AL549_RS11390	PF00005	ABC transporter
AL549_RS11400	PF13416	Bacterial extracellular solute-binding protein
AL549_RS11405	PF03724	META domain
AL549_RS11410	PF06945	AL549_RS11410
AL549_RS11425	PF00990	GGDEF domain
AL549_RS11430	PF07394	AL549_RS11430
AL549_RS11435	PF08811	AL549_RS11435
AL549_RS11440	PF01386	Ribosomal L25p family
AL549_RS11445	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS11450	PF00072	Response regulator receiver domain
AL549_RS11450	PF00486	Transcriptional regulatory protein, C terminal
AL549_RS11460	PF00271	Helicase conserved C-terminal domain
AL549_RS11460	PF04851	Type III restriction enzyme, res subunit
AL549_RS11465	PF00849	RNA pseudouridylate synthase
AL549_RS11465	PF01479	S4 domain
AL549_RS11470	PF07690	Major Facilitator Superfamily
AL549_RS11475	PF11140	AL549_RS11475
AL549_RS11480	PF00027	Cyclic nucleotide-binding domain
AL549_RS11480	PF00999	Sodium/hydrogen exchanger family
AL549_RS11485	PF11066	AL549_RS11485
AL549_RS11485	PF13460	NADH(P)-binding
AL549_RS11490	PF00005	ABC transporter
AL549_RS11495	PF02687	AL549_RS11495
AL549_RS11500	PF07143	Hydroxyneurosporene synthase (CrtC)
AL549_RS11500	PF17186	AL549_RS11500
AL549_RS11505	PF06965	Na+/H+ antiporter 1
AL549_RS11510	PF00440	Bacterial regulatory proteins, tetR family
AL549_RS11515	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL549_RS11515	PF02770	Acyl-CoA dehydrogenase, middle domain
AL549_RS11515	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL549_RS11515	PF09317	AL549_RS11515
AL549_RS11520	PF07055	Enoyl reductase FAD binding domain
AL549_RS11520	PF12241	Trans-2-enoyl-CoA reductase catalytic region
AL549_RS11520	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
AL549_RS11525	PF02080	TrkA-C domain
AL549_RS11525	PF06826	AL549_RS11525
AL549_RS11530	PF00462	Glutaredoxin
AL549_RS11535	PF00465	Iron-containing alcohol dehydrogenase
AL549_RS11540	PF01380	SIS domain
AL549_RS11540	PF01418	Helix-turn-helix domain, rpiR family
AL549_RS11545	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AL549_RS11555	PF03956	AL549_RS11555
AL549_RS11560	PF08668	HDOD domain
AL549_RS11565	PF04993	TfoX N-terminal domain
AL549_RS11565	PF04994	TfoX C-terminal domain
AL549_RS11575	PF00072	Response regulator receiver domain
AL549_RS11580	PF00027	Cyclic nucleotide-binding domain
AL549_RS11580	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS11580	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS11585	PF06097	AL549_RS11585
AL549_RS11590	PF00266	Aminotransferase class-V
AL549_RS11595	PF00005	ABC transporter
AL549_RS11595	PF00664	ABC transporter transmembrane region
AL549_RS11600	PF00005	ABC transporter
AL549_RS11600	PF00664	ABC transporter transmembrane region
AL549_RS11605	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_RS11610	PF10014	2OG-Fe dioxygenase
AL549_RS11615	PF00266	Aminotransferase class-V
AL549_RS11620	PF10977	AL549_RS11620
AL549_RS11625	PF00990	GGDEF domain
AL549_RS11630	PF00939	Sodium:sulfate symporter transmembrane region
AL549_RS11635	PF02698	DUF218 domain
AL549_RS11640	PF00390	Malic enzyme, N-terminal domain
AL549_RS11640	PF03949	Malic enzyme, NAD binding domain
AL549_RS11645	PF00270	DEAD/DEAH box helicase
AL549_RS11645	PF00271	Helicase conserved C-terminal domain
AL549_RS11645	PF04408	Helicase associated domain (HA2)
AL549_RS11650	PF02253	Phospholipase A1
AL549_RS11660	PF01259	SAICAR synthetase
AL549_RS11665	PF03846	Cell division inhibitor SulA
AL549_RS11670	PF04172	AL549_RS11670
AL549_RS11675	PF03788	AL549_RS11675
AL549_RS11680	PF00929	Exonuclease
AL549_RS11680	PF08411	Exonuclease C-terminal
AL549_RS11685	PF08732	AL549_RS11685
AL549_RS11690	PF13688	Metallo-peptidase family M12
AL549_RS11695	PF02277	Phosphoribosyltransferase
AL549_RS11700	PF02654	AL549_RS11700
AL549_RS11705	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
AL549_RS11710	PF00300	Histidine phosphatase superfamily (branch 1)
AL549_RS11715	PF01432	Peptidase family M3
AL549_RS11715	PF08439	Oligopeptidase F
AL549_RS11720	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL549_RS11725	PF01032	FecCD transport family
AL549_RS11730	PF00005	ABC transporter
AL549_RS11735	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
AL549_RS11740	PF07209	AL549_RS11740
AL549_RS11745	PF07690	Major Facilitator Superfamily
AL549_RS11750	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS11750	PF03466	LysR substrate binding domain
AL549_RS11755	PF00462	Glutaredoxin
AL549_RS11760	PF01863	Protein of unknown function DUF45
AL549_RS11765	PF05971	Protein of unknown function (DUF890)
AL549_RS11775	PF13431	Tetratricopeptide repeat
AL549_RS11775	PF14559	Tetratricopeptide repeat
AL549_RS11780	PF04204	Homoserine O-succinyltransferase
AL549_RS11785	PF00149	Calcineurin-like phosphoesterase
AL549_RS11785	PF02872	5'-nucleotidase, C-terminal domain
AL549_RS11790	PF01546	Peptidase family M20/M25/M40
AL549_RS11790	PF07687	Peptidase dimerisation domain
AL549_RS11795	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_RS11795	PF14696	Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal
AL549_RS11800	PF04209	homogentisate 1,2-dioxygenase
AL549_RS11805	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL549_RS11810	PF13417	Glutathione S-transferase, N-terminal domain
AL549_RS11815	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS11825	PF10881	AL549_RS11825
AL549_RS11845	PF00990	GGDEF domain
AL549_RS11850	PF00313	'Cold-shock' DNA-binding domain
AL549_RS11855	PF04342	AL549_RS11855
AL549_RS11860	PF00141	Peroxidase
AL549_RS11865	PF03009	Glycerophosphoryl diester phosphodiesterase family
AL549_RS11870	PF00455	AL549_RS11870
AL549_RS11870	PF08220	DeoR-like helix-turn-helix domain
AL549_RS11875	PF00005	ABC transporter
AL549_RS11880	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS11885	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS11890	PF13416	Bacterial extracellular solute-binding protein
AL549_RS11895	PF01966	HD domain
AL549_RS11900	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS11900	PF00672	HAMP domain
AL549_RS11905	PF01925	AL549_RS11905
AL549_RS11910	PF00196	Bacterial regulatory proteins, luxR family
AL549_RS11920	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AL549_RS11925	PF00577	Outer membrane usher protein
AL549_RS11935	PF01970	AL549_RS11935
AL549_RS11940	PF07331	AL549_RS11940
AL549_RS11945	PF03401	Tripartite tricarboxylate transporter family receptor
AL549_RS11950	PF00271	Helicase conserved C-terminal domain
AL549_RS11950	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
AL549_RS11950	PF04851	Type III restriction enzyme, res subunit
AL549_RS11950	PF08463	AL549_RS11950
AL549_RS11950	PF13643	AL549_RS11950
AL549_RS11955	PF02384	N-6 DNA Methylase
AL549_RS11955	PF12161	HsdM N-terminal domain
AL549_RS11960	PF01420	Type I restriction modification DNA specificity domain
AL549_RS11965	PF00392	Bacterial regulatory proteins, gntR family
AL549_RS11965	PF07729	FCD domain
AL549_RS11970	PF13714	Phosphoenolpyruvate phosphomutase
AL549_RS11975	PF00285	Citrate synthase
AL549_RS11980	PF00330	Aconitase family (aconitate hydratase)
AL549_RS11980	PF00694	Aconitase C-terminal domain
AL549_RS11985	PF04303	PrpF protein
AL549_RS11990	PF00501	AMP-binding enzyme
AL549_RS11990	PF13193	AMP-binding enzyme C-terminal domain
AL549_RS11990	PF16177	AL549_RS11990
AL549_RS11995	PF00583	Acetyltransferase (GNAT) family
AL549_RS12000	PF00089	Trypsin
AL549_RS12005	PF00293	NUDIX domain
AL549_RS12005	PF01569	PAP2 superfamily
AL549_RS12010	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS12010	PF00672	HAMP domain
AL549_RS12015	PF08282	haloacid dehalogenase-like hydrolase
AL549_RS12020	PF04055	Radical SAM superfamily
AL549_RS12020	PF13394	4Fe-4S single cluster domain
AL549_RS12025	PF06508	Queuosine biosynthesis protein QueC
AL549_RS12030	PF00990	GGDEF domain
AL549_RS12030	PF13424	Tetratricopeptide repeat
AL549_RS12035	PF11042	AL549_RS12035
AL549_RS12040	PF00691	OmpA family
AL549_RS12045	PF02321	Outer membrane efflux protein
AL549_RS12050	PF07691	PA14 domain
AL549_RS12050	PF13519	von Willebrand factor type A domain
AL549_RS12055	PF10672	S-adenosylmethionine-dependent methyltransferase
AL549_RS12060	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS12065	PF00708	Acylphosphatase
AL549_RS12070	PF04358	DsrC like protein
AL549_RS12080	PF01027	Inhibitor of apoptosis-promoting Bax1
AL549_RS12085	PF00005	ABC transporter
AL549_RS12090	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS12095	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS12100	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS12105	PF10414	Sirohaem synthase dimerisation region
AL549_RS12105	PF13241	Putative NAD(P)-binding
AL549_RS12105	PF14824	Sirohaem biosynthesis protein central
AL549_RS12110	PF12838	4Fe-4S dicluster domain
AL549_RS12115	PF12801	AL549_RS12115
AL549_RS12115	PF13187	4Fe-4S dicluster domain
AL549_RS12120	PF01553	Acyltransferase
AL549_RS12125	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
AL549_RS12130	PF01810	AL549_RS12130
AL549_RS12140	PF01235	AL549_RS12140
AL549_RS12150	PF00196	Bacterial regulatory proteins, luxR family
AL549_RS12155	PF12698	ABC-2 family transporter protein
AL549_RS12160	PF12698	ABC-2 family transporter protein
AL549_RS12165	PF13437	HlyD family secretion protein
AL549_RS12165	PF13533	Biotin-lipoyl like
AL549_RS12170	PF02321	Outer membrane efflux protein
AL549_RS12180	PF00989	PAS fold
AL549_RS12180	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS12180	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
AL549_RS12180	PF17203	AL549_RS12180
AL549_RS12185	PF00072	Response regulator receiver domain
AL549_RS12185	PF12431	AL549_RS12185
AL549_RS12190	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
AL549_RS12190	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
AL549_RS12195	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AL549_RS12200	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
AL549_RS12200	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL549_RS12210	PF13505	Outer membrane protein beta-barrel domain
AL549_RS12225	PF06945	AL549_RS12225
AL549_RS12230	PF13671	AAA domain
AL549_RS12235	PF02397	AL549_RS12235
AL549_RS12240	PF13641	Glycosyltransferase like family 2
AL549_RS12245	PF00534	Glycosyl transferases group 1
AL549_RS12245	PF13439	Glycosyltransferase Family 4
AL549_RS12250	PF13807	AL549_RS12250
AL549_RS12260	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_RS12265	PF04932	AL549_RS12265
AL549_RS12270	PF01943	AL549_RS12270
AL549_RS12275	PF00534	Glycosyl transferases group 1
AL549_RS12280	PF00534	Glycosyl transferases group 1
AL549_RS12280	PF13439	Glycosyltransferase Family 4
AL549_RS12285	PF13579	Glycosyl transferase 4-like domain
AL549_RS12285	PF13692	Glycosyl transferases group 1
AL549_RS12290	PF00072	Response regulator receiver domain
AL549_RS12290	PF00158	Sigma-54 interaction domain
AL549_RS12290	PF02954	Bacterial regulatory protein, Fis family
AL549_RS12295	PF00072	Response regulator receiver domain
AL549_RS12295	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS12295	PF01627	Hpt domain
AL549_RS12295	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS12300	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
AL549_RS12310	PF02563	Polysaccharide biosynthesis/export protein
AL549_RS12310	PF10531	SLBB domain
AL549_RS12315	PF00691	OmpA family
AL549_RS12320	PF01740	STAS domain
AL549_RS12325	PF01068	ATP dependent DNA ligase domain
AL549_RS12325	PF14743	DNA ligase OB-like domain
AL549_RS12330	PF00990	GGDEF domain
AL549_RS12335	PF04461	Protein of unknown function (DUF520)
AL549_RS12340	PF00793	DAHP synthetase I family
AL549_RS12345	PF14539	Domain of unknown function (DUF4442)
AL549_RS12355	PF13509	S1 domain
AL549_RS12360	PF01189	NOL1/NOP2/sun family
AL549_RS12360	PF13636	pre-rRNA processing and ribosome biogenesis
AL549_RS12360	PF17125	AL549_RS12360
AL549_RS12365	PF02470	AL549_RS12365
AL549_RS12370	PF04403	AL549_RS12370
AL549_RS12375	PF00005	ABC transporter
AL549_RS12375	PF00664	ABC transporter transmembrane region
AL549_RS12380	PF13185	GAF domain
AL549_RS12385	PF04352	ProQ/FINO family
AL549_RS12385	PF17516	AL549_RS12385
AL549_RS12390	PF00595	PDZ domain (Also known as DHR or GLGF)
AL549_RS12390	PF03572	Peptidase family S41
AL549_RS12390	PF08180	AL549_RS12390
AL549_RS12390	PF11818	AL549_RS12390
AL549_RS12400	PF01433	Peptidase family M1
AL549_RS12400	PF11940	Domain of unknown function (DUF3458)
AL549_RS12400	PF17432	AL549_RS12400
AL549_RS12405	PF11197	AL549_RS12405
AL549_RS12410	PF05088	AL549_RS12410
AL549_RS12415	PF01180	Dihydroorotate dehydrogenase
AL549_RS12420	PF07126	AL549_RS12420
AL549_RS12425	PF01170	Putative RNA methylase family UPF0020
AL549_RS12425	PF02926	THUMP domain
AL549_RS12425	PF10672	S-adenosylmethionine-dependent methyltransferase
AL549_RS12430	PF05768	Glutaredoxin-like domain (DUF836)
AL549_RS12435	PF00005	ABC transporter
AL549_RS12435	PF12848	ABC transporter
AL549_RS12435	PF16326	AL549_RS12435
AL549_RS12440	PF11949	AL549_RS12440
AL549_RS12445	PF04957	Ribosome modulation factor
AL549_RS12450	PF07977	FabA-like domain
AL549_RS12455	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL549_RS12455	PF13654	AAA domain
AL549_RS12460	PF06303	Organiser of macrodomain of Terminus of chromosome
AL549_RS12460	PF17414	AL549_RS12460
AL549_RS12465	PF12321	AL549_RS12465
AL549_RS12475	PF08668	HDOD domain
AL549_RS12480	PF00072	Response regulator receiver domain
AL549_RS12480	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS12480	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS12485	PF08495	AL549_RS12485
AL549_RS12485	PF10442	AL549_RS12485
AL549_RS12495	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AL549_RS12500	PF02433	Cytochrome C oxidase, mono-heme subunit/FixO
AL549_RS12505	PF05545	AL549_RS12505
AL549_RS12510	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL549_RS12510	PF14715	N-terminal domain of cytochrome oxidase-cbb3, FixP
AL549_RS12515	PF05751	AL549_RS12515
AL549_RS12520	PF00122	E1-E2 ATPase
AL549_RS12520	PF00403	Heavy-metal-associated domain
AL549_RS12520	PF00702	haloacid dehalogenase-like hydrolase
AL549_RS12520	PF12156	AL549_RS12520
AL549_RS12525	PF03597	AL549_RS12525
AL549_RS12530	PF13386	AL549_RS12530
AL549_RS12535	PF00027	Cyclic nucleotide-binding domain
AL549_RS12535	PF13545	Crp-like helix-turn-helix domain
AL549_RS12540	PF00582	Universal stress protein family
AL549_RS12545	PF01171	PP-loop family
AL549_RS12550	PF01609	Transposase DDE domain
AL549_RS12550	PF13006	AL549_RS12550
AL549_RS12555	PF11205	AL549_RS12555
AL549_RS12560	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AL549_RS12570	PF00005	ABC transporter
AL549_RS12570	PF08402	TOBE domain
AL549_RS12575	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS12580	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS12585	PF13416	Bacterial extracellular solute-binding protein
AL549_RS12590	PF13416	Bacterial extracellular solute-binding protein
AL549_RS12595	PF02146	Sir2 family
AL549_RS12600	PF00909	Ammonium Transporter Family
AL549_RS12630	PF01292	Prokaryotic cytochrome b561
AL549_RS12635	PF13247	4Fe-4S dicluster domain
AL549_RS12640	PF00384	Molybdopterin oxidoreductase
AL549_RS12640	PF01568	Molydopterin dinucleotide binding domain
AL549_RS12640	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL549_RS12650	PF02613	Nitrate reductase delta subunit
AL549_RS12655	PF00037	4Fe-4S binding domain
AL549_RS12655	PF12838	4Fe-4S dicluster domain
AL549_RS12660	PF11748	AL549_RS12660
AL549_RS12665	PF11749	AL549_RS12665
AL549_RS12670	PF02634	FdhD/NarQ family
AL549_RS12675	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS12675	PF00672	HAMP domain
AL549_RS12680	PF00005	ABC transporter
AL549_RS12680	PF12848	ABC transporter
AL549_RS12690	PF00924	Mechanosensitive ion channel
AL549_RS12695	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS12695	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS12695	PF17202	AL549_RS12695
AL549_RS12700	PF00072	Response regulator receiver domain
AL549_RS12700	PF00158	Sigma-54 interaction domain
AL549_RS12700	PF02954	Bacterial regulatory protein, Fis family
AL549_RS12705	PF12849	PBP superfamily domain
AL549_RS12710	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS12715	PF00005	ABC transporter
AL549_RS12720	PF12804	MobA-like NTP transferase domain
AL549_RS12725	PF00994	Probable molybdopterin binding domain
AL549_RS12725	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
AL549_RS12725	PF03453	MoeA N-terminal region (domain I and II)
AL549_RS12725	PF03454	MoeA C-terminal region (domain IV)
AL549_RS12730	PF11173	AL549_RS12730
AL549_RS12735	PF00480	ROK family
AL549_RS12740	PF03942	AL549_RS12740
AL549_RS12745	PF04116	AL549_RS12745
AL549_RS12750	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS12755	PF00877	NlpC/P60 family
AL549_RS12760	PF12290	AL549_RS12760
AL549_RS12765	PF00990	GGDEF domain
AL549_RS12770	PF00072	Response regulator receiver domain
AL549_RS12775	PF03881	Fructosamine kinase
AL549_RS12780	PF14255	AL549_RS12780
AL549_RS12785	PF00677	Lumazine binding domain
AL549_RS12790	PF01554	MatE
AL549_RS12825	PF00665	Integrase core domain
AL549_RS12825	PF13276	AL549_RS12825
AL549_RS12835	PF11665	AL549_RS12835
AL549_RS12840	PF13091	PLD-like domain
AL549_RS12840	PF14280	AL549_RS12840
AL549_RS12845	PF11665	AL549_RS12845
AL549_RS12855	PF11665	AL549_RS12855
AL549_RS12860	PF13673	Acetyltransferase (GNAT) domain
AL549_RS12865	PF11665	AL549_RS12865
AL549_RS12885	PF11665	AL549_RS12885
AL549_RS12895	PF11665	AL549_RS12895
AL549_RS12900	PF11665	AL549_RS12900
AL549_RS12905	PF11665	AL549_RS12905
AL549_RS12915	PF00665	Integrase core domain
AL549_RS12915	PF13276	AL549_RS12915
AL549_RS12930	PF10077	AL549_RS12930
AL549_RS12935	PF11665	AL549_RS12935
AL549_RS12945	PF11665	AL549_RS12945
AL549_RS12955	PF11665	AL549_RS12955
AL549_RS12970	PF09016	Pas factor saposin fold
AL549_RS12980	PF11665	AL549_RS12980
AL549_RS12985	PF00583	Acetyltransferase (GNAT) family
AL549_RS13000	PF13527	Acetyltransferase (GNAT) domain
AL549_RS13010	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL549_RS13015	PF11665	AL549_RS13015
AL549_RS13040	PF11665	AL549_RS13040
AL549_RS13050	PF11665	AL549_RS13050
AL549_RS13055	PF03703	AL549_RS13055
AL549_RS13060	PF11665	AL549_RS13060
AL549_RS13070	PF11665	AL549_RS13070
AL549_RS13075	PF11665	AL549_RS13075
AL549_RS13080	PF07799	AL549_RS13080
AL549_RS13085	PF11665	AL549_RS13085
AL549_RS13090	PF11665	AL549_RS13090
AL549_RS13100	PF14552	Tautomerase enzyme
AL549_RS13105	PF11665	AL549_RS13105
AL549_RS13110	PF13420	Acetyltransferase (GNAT) domain
AL549_RS13115	PF11665	AL549_RS13115
AL549_RS13120	PF11665	AL549_RS13120
AL549_RS13125	PF12680	SnoaL-like domain
AL549_RS13140	PF11665	AL549_RS13140
AL549_RS13145	PF11665	AL549_RS13145
AL549_RS13155	PF11665	AL549_RS13155
AL549_RS13165	PF13673	Acetyltransferase (GNAT) domain
AL549_RS13180	PF11665	AL549_RS13180
AL549_RS13185	PF00043	Glutathione S-transferase, C-terminal domain
AL549_RS13185	PF02798	Glutathione S-transferase, N-terminal domain
AL549_RS13205	PF02498	AL549_RS13205
AL549_RS13220	PF11665	AL549_RS13220
AL549_RS13230	PF11665	AL549_RS13230
AL549_RS13245	PF10988	Protein of unknown function (DUF2807)
AL549_RS13255	PF07653	Variant SH3 domain
AL549_RS13260	PF11665	AL549_RS13260
AL549_RS13265	PF13302	Acetyltransferase (GNAT) domain
AL549_RS13270	PF11665	AL549_RS13270
AL549_RS13280	PF11665	AL549_RS13280
AL549_RS13285	PF14552	Tautomerase enzyme
AL549_RS13290	PF14022	AL549_RS13290
AL549_RS13295	PF11665	AL549_RS13295
AL549_RS13330	PF11665	AL549_RS13330
AL549_RS13345	PF11665	AL549_RS13345
AL549_RS13350	PF00043	Glutathione S-transferase, C-terminal domain
AL549_RS13350	PF02798	Glutathione S-transferase, N-terminal domain
AL549_RS13355	PF11665	AL549_RS13355
AL549_RS13365	PF11665	AL549_RS13365
AL549_RS13375	PF11665	AL549_RS13375
AL549_RS13390	PF11665	AL549_RS13390
AL549_RS13410	PF11185	AL549_RS13410
AL549_RS13410	PF11665	AL549_RS13410
AL549_RS13415	PF13671	AAA domain
AL549_RS13420	PF11665	AL549_RS13420
AL549_RS13425	PF12680	SnoaL-like domain
AL549_RS13430	PF11665	AL549_RS13430
AL549_RS13450	PF11665	AL549_RS13450
AL549_RS13475	PF00583	Acetyltransferase (GNAT) family
AL549_RS13490	PF11665	AL549_RS13490
AL549_RS13510	PF04471	Restriction endonuclease
AL549_RS13515	PF11665	AL549_RS13515
AL549_RS13530	PF11665	AL549_RS13530
AL549_RS13535	PF11665	AL549_RS13535
AL549_RS13540	PF11665	AL549_RS13540
AL549_RS13545	PF11665	AL549_RS13545
AL549_RS13565	PF12158	AL549_RS13565
AL549_RS13580	PF11665	AL549_RS13580
AL549_RS13590	PF11665	AL549_RS13590
AL549_RS13610	PF11665	AL549_RS13610
AL549_RS13615	PF13302	Acetyltransferase (GNAT) domain
AL549_RS13620	PF11665	AL549_RS13620
AL549_RS13635	PF09905	Uncharacterized conserved protein (DUF2132)
AL549_RS13640	PF11665	AL549_RS13640
AL549_RS13650	PF11665	AL549_RS13650
AL549_RS13675	PF11665	AL549_RS13675
AL549_RS13680	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_RS13685	PF11665	AL549_RS13685
AL549_RS13690	PF01844	HNH endonuclease
AL549_RS13695	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_RS13700	PF11665	AL549_RS13700
AL549_RS13725	PF14113	Domain of unknown function (DUF4285)
AL549_RS13730	PF11665	AL549_RS13730
AL549_RS13735	PF13302	Acetyltransferase (GNAT) domain
AL549_RS13740	PF11665	AL549_RS13740
AL549_RS13745	PF00583	Acetyltransferase (GNAT) family
AL549_RS13750	PF07978	NIPSNAP
AL549_RS13755	PF11665	AL549_RS13755
AL549_RS13760	PF11665	AL549_RS13760
AL549_RS13765	PF13671	AAA domain
AL549_RS13770	PF11665	AL549_RS13770
AL549_RS13780	PF11665	AL549_RS13780
AL549_RS13800	PF11665	AL549_RS13800
AL549_RS13805	PF11665	AL549_RS13805
AL549_RS13810	PF13676	TIR domain
AL549_RS13820	PF04266	ASCH domain
AL549_RS13840	PF11665	AL549_RS13840
AL549_RS13855	PF08241	Methyltransferase domain
AL549_RS13860	PF11665	AL549_RS13860
AL549_RS13870	PF11665	AL549_RS13870
AL549_RS13875	PF13302	Acetyltransferase (GNAT) domain
AL549_RS13885	PF11665	AL549_RS13885
AL549_RS13895	PF11665	AL549_RS13895
AL549_RS13900	PF00293	NUDIX domain
AL549_RS13905	PF11665	AL549_RS13905
AL549_RS13935	PF13673	Acetyltransferase (GNAT) domain
AL549_RS13945	PF14113	Domain of unknown function (DUF4285)
AL549_RS13960	PF13302	Acetyltransferase (GNAT) domain
AL549_RS13965	PF11665	AL549_RS13965
AL549_RS13970	PF11665	AL549_RS13970
AL549_RS14005	PF11665	AL549_RS14005
AL549_RS14015	PF11665	AL549_RS14015
AL549_RS14035	PF11665	AL549_RS14035
AL549_RS14045	PF11665	AL549_RS14045
AL549_RS14055	PF11665	AL549_RS14055
AL549_RS14060	PF07119	AL549_RS14060
AL549_RS14065	PF11665	AL549_RS14065
AL549_RS14070	PF03693	Uncharacterised protein family (UPF0156)
AL549_RS14075	PF05016	Plasmid stabilisation system protein
AL549_RS14085	PF11665	AL549_RS14085
AL549_RS14090	PF11665	AL549_RS14090
AL549_RS14095	PF11665	AL549_RS14095
AL549_RS14105	PF11665	AL549_RS14105
AL549_RS14110	PF12746	GNAT acetyltransferase
AL549_RS14130	PF10988	Protein of unknown function (DUF2807)
AL549_RS14135	PF11665	AL549_RS14135
AL549_RS14145	PF11665	AL549_RS14145
AL549_RS14150	PF13302	Acetyltransferase (GNAT) domain
AL549_RS14170	PF11665	AL549_RS14170
AL549_RS14185	PF07978	NIPSNAP
AL549_RS14190	PF11665	AL549_RS14190
AL549_RS14195	PF11665	AL549_RS14195
AL549_RS14210	PF11665	AL549_RS14210
AL549_RS14215	PF11665	AL549_RS14215
AL549_RS14225	PF00665	Integrase core domain
AL549_RS14225	PF13276	AL549_RS14225
AL549_RS14235	PF11665	AL549_RS14235
AL549_RS14240	PF11665	AL549_RS14240
AL549_RS14265	PF07119	AL549_RS14265
AL549_RS14275	PF11665	AL549_RS14275
AL549_RS14285	PF11665	AL549_RS14285
AL549_RS14300	PF00293	NUDIX domain
AL549_RS14305	PF11665	AL549_RS14305
AL549_RS14315	PF11665	AL549_RS14315
AL549_RS14330	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_RS14335	PF07978	NIPSNAP
AL549_RS14355	PF04664	AL549_RS14355
AL549_RS14360	PF11665	AL549_RS14360
AL549_RS14375	PF01396	AL549_RS14375
AL549_RS14375	PF08378	AL549_RS14375
AL549_RS14380	PF11665	AL549_RS14380
AL549_RS14390	PF11665	AL549_RS14390
AL549_RS14405	PF11665	AL549_RS14405
AL549_RS14425	PF11665	AL549_RS14425
AL549_RS14430	PF01844	HNH endonuclease
AL549_RS14435	PF11665	AL549_RS14435
AL549_RS14450	PF11665	AL549_RS14450
AL549_RS14455	PF11665	AL549_RS14455
AL549_RS14465	PF11665	AL549_RS14465
AL549_RS14475	PF11665	AL549_RS14475
AL549_RS14485	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL549_RS14485	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL549_RS14490	PF11665	AL549_RS14490
AL549_RS14495	PF04970	Lecithin retinol acyltransferase
AL549_RS14505	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_RS14510	PF15655	AL549_RS14510
AL549_RS14520	PF12681	Glyoxalase-like domain
AL549_RS14540	PF11665	AL549_RS14540
AL549_RS14555	PF04266	ASCH domain
AL549_RS14560	PF11665	AL549_RS14560
AL549_RS14575	PF11665	AL549_RS14575
AL549_RS14580	PF11665	AL549_RS14580
AL549_RS14585	PF06940	AL549_RS14585
AL549_RS14595	PF11665	AL549_RS14595
AL549_RS14600	PF11665	AL549_RS14600
AL549_RS14605	PF11665	AL549_RS14605
AL549_RS14615	PF11665	AL549_RS14615
AL549_RS14635	PF13419	Haloacid dehalogenase-like hydrolase
AL549_RS14640	PF01965	DJ-1/PfpI family
AL549_RS14650	PF11665	AL549_RS14650
AL549_RS14660	PF11665	AL549_RS14660
AL549_RS14675	PF01202	Shikimate kinase
AL549_RS14685	PF10387	Protein of unknown function (DUF2442)
AL549_RS14690	PF13711	AL549_RS14690
AL549_RS14695	PF11665	AL549_RS14695
AL549_RS14700	PF10544	AL549_RS14700
AL549_RS14705	PF11665	AL549_RS14705
AL549_RS14720	PF11665	AL549_RS14720
AL549_RS14730	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_RS14745	PF11665	AL549_RS14745
AL549_RS14750	PF01230	HIT domain
AL549_RS14755	PF11665	AL549_RS14755
AL549_RS14770	PF11665	AL549_RS14770
AL549_RS14780	PF11665	AL549_RS14780
AL549_RS14785	PF13527	Acetyltransferase (GNAT) domain
AL549_RS14790	PF11665	AL549_RS14790
AL549_RS14810	PF14113	Domain of unknown function (DUF4285)
AL549_RS14820	PF00293	NUDIX domain
AL549_RS14835	PF04266	ASCH domain
AL549_RS14840	PF11665	AL549_RS14840
AL549_RS14850	PF11665	AL549_RS14850
AL549_RS14860	PF00293	NUDIX domain
AL549_RS14865	PF11665	AL549_RS14865
AL549_RS14875	PF11665	AL549_RS14875
AL549_RS14880	PF11665	AL549_RS14880
AL549_RS14890	PF11665	AL549_RS14890
AL549_RS14900	PF11665	AL549_RS14900
AL549_RS14935	PF11665	AL549_RS14935
AL549_RS14945	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL549_RS14950	PF05016	Plasmid stabilisation system protein
AL549_RS14955	PF01797	Transposase IS200 like
AL549_RS14960	PF11665	AL549_RS14960
AL549_RS14975	PF11665	AL549_RS14975
AL549_RS14985	PF11665	AL549_RS14985
AL549_RS14995	PF11665	AL549_RS14995
AL549_RS15005	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_RS15020	PF11665	AL549_RS15020
AL549_RS15025	PF00293	NUDIX domain
AL549_RS15030	PF11665	AL549_RS15030
AL549_RS15035	PF11665	AL549_RS15035
AL549_RS15045	PF11665	AL549_RS15045
AL549_RS15050	PF14552	Tautomerase enzyme
AL549_RS15055	PF00583	Acetyltransferase (GNAT) family
AL549_RS15065	PF11665	AL549_RS15065
AL549_RS15080	PF11665	AL549_RS15080
AL549_RS15085	PF03819	MazG nucleotide pyrophosphohydrolase domain
AL549_RS15090	PF11665	AL549_RS15090
AL549_RS15095	PF07362	Post-segregation antitoxin CcdA
AL549_RS15100	PF01845	CcdB protein
AL549_RS15105	PF13302	Acetyltransferase (GNAT) domain
AL549_RS15115	PF04365	Protein of unknown function (DUF497)
AL549_RS15140	PF11665	AL549_RS15140
AL549_RS15145	PF11665	AL549_RS15145
AL549_RS15155	PF11665	AL549_RS15155
AL549_RS15165	PF11665	AL549_RS15165
AL549_RS15175	PF11665	AL549_RS15175
AL549_RS15180	PF07362	Post-segregation antitoxin CcdA
AL549_RS15185	PF01845	CcdB protein
AL549_RS15190	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_RS15220	PF11665	AL549_RS15220
AL549_RS15230	PF11665	AL549_RS15230
AL549_RS15255	PF06769	Plasmid encoded toxin Txe
AL549_RS15260	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL549_RS15265	PF11665	AL549_RS15265
AL549_RS15270	PF11665	AL549_RS15270
AL549_RS15280	PF11665	AL549_RS15280
AL549_RS15285	PF01810	AL549_RS15285
AL549_RS15300	PF11665	AL549_RS15300
AL549_RS15310	PF00583	Acetyltransferase (GNAT) family
AL549_RS15325	PF00589	Phage integrase family
AL549_RS15325	PF13495	Phage integrase, N-terminal SAM-like domain
AL549_RS15330	PF00453	Ribosomal protein L20
AL549_RS15335	PF01632	Ribosomal protein L35
AL549_RS15340	PF00707	Translation initiation factor IF-3, C-terminal domain
AL549_RS15340	PF05198	Translation initiation factor IF-3, N-terminal domain
AL549_RS15345	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL549_RS15345	PF02824	TGS domain
AL549_RS15345	PF03129	Anticodon binding domain
AL549_RS15345	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AL549_RS15350	PF11383	AL549_RS15350
AL549_RS15355	PF07070	AL549_RS15355
AL549_RS15360	PF00392	Bacterial regulatory proteins, gntR family
AL549_RS15360	PF07702	UTRA domain
AL549_RS15365	PF01979	Amidohydrolase family
AL549_RS15370	PF00491	Arginase family
AL549_RS15375	PF01175	Urocanase
AL549_RS15375	PF17391	AL549_RS15375
AL549_RS15375	PF17392	AL549_RS15375
AL549_RS15380	PF00221	Aromatic amino acid lyase
AL549_RS15385	PF12119	AL549_RS15385
AL549_RS15390	PF00089	Trypsin
AL549_RS15395	PF04191	Phospholipid methyltransferase
AL549_RS15400	PF01565	FAD binding domain
AL549_RS15400	PF02913	FAD linked oxidases, C-terminal domain
AL549_RS15400	PF13183	4Fe-4S dicluster domain
AL549_RS15405	PF11813	AL549_RS15405
AL549_RS15410	PF10979	AL549_RS15410
AL549_RS15415	PF00691	OmpA family
AL549_RS15415	PF13488	AL549_RS15415
AL549_RS15420	PF08238	Sel1 repeat
AL549_RS15430	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL549_RS15430	PF08211	Cytidine and deoxycytidylate deaminase zinc-binding region
AL549_RS15435	PF02222	ATP-grasp domain
AL549_RS15440	PF05724	Thiopurine S-methyltransferase (TPMT)
AL549_RS15450	PF00216	Bacterial DNA-binding protein
AL549_RS15455	PF00857	Isochorismatase family
AL549_RS15465	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
AL549_RS15470	PF01588	Putative tRNA binding domain
AL549_RS15470	PF03147	Ferredoxin-fold anticodon binding domain
AL549_RS15470	PF03483	B3/4 domain
AL549_RS15470	PF03484	tRNA synthetase B5 domain
AL549_RS15475	PF01409	tRNA synthetases class II core domain (F)
AL549_RS15475	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
AL549_RS15480	PF00990	GGDEF domain
AL549_RS15480	PF01814	Hemerythrin HHE cation binding domain
AL549_RS15490	PF17131	AL549_RS15490
AL549_RS15495	PF03176	MMPL family
AL549_RS15500	PF00440	Bacterial regulatory proteins, tetR family
AL549_RS15510	PF16313	AL549_RS15510
AL549_RS15515	PF13443	Cro/C1-type HTH DNA-binding domain
AL549_RS15520	PF13302	Acetyltransferase (GNAT) domain
AL549_RS15525	PF01965	DJ-1/PfpI family
AL549_RS15530	PF08668	HDOD domain
AL549_RS15535	PF13419	Haloacid dehalogenase-like hydrolase
AL549_RS15540	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL549_RS15545	PF00491	Arginase family
AL549_RS15550	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS15565	PF07690	Major Facilitator Superfamily
AL549_RS15575	PF06580	AL549_RS15575
AL549_RS15580	PF00072	Response regulator receiver domain
AL549_RS15580	PF04397	LytTr DNA-binding domain
AL549_RS15585	PF03280	Proteobacterial lipase chaperone protein
AL549_RS15590	PF00561	alpha/beta hydrolase fold
AL549_RS15595	PF02566	OsmC-like protein
AL549_RS15610	PF13505	Outer membrane protein beta-barrel domain
AL549_RS15615	PF00270	DEAD/DEAH box helicase
AL549_RS15615	PF00271	Helicase conserved C-terminal domain
AL549_RS15615	PF04408	Helicase associated domain (HA2)
AL549_RS15615	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
AL549_RS15615	PF11898	AL549_RS15615
AL549_RS15625	PF00704	Glycosyl hydrolases family 18
AL549_RS15630	PF02525	Flavodoxin-like fold
AL549_RS15635	PF00092	von Willebrand factor type A domain
AL549_RS15635	PF13400	AL549_RS15635
AL549_RS15645	PF07811	AL549_RS15645
AL549_RS15650	PF13181	Tetratricopeptide repeat
AL549_RS15650	PF13432	Tetratricopeptide repeat
AL549_RS15655	PF00482	Type II secretion system (T2SS), protein F
AL549_RS15660	PF00482	Type II secretion system (T2SS), protein F
AL549_RS15665	PF00437	Type II/IV secretion system protein
AL549_RS15670	PF10609	ParA/MinD ATPase like
AL549_RS15680	PF00263	AL549_RS15680
AL549_RS15680	PF13629	AL549_RS15680
AL549_RS15685	PF08666	SAF domain
AL549_RS15685	PF16976	AL549_RS15685
AL549_RS15690	PF01478	Type IV leader peptidase family
AL549_RS15695	PF04964	AL549_RS15695
AL549_RS15700	PF07603	AL549_RS15700
AL549_RS15710	PF06629	AL549_RS15710
AL549_RS15720	PF05099	Tellurite resistance protein TerB
AL549_RS15725	PF00929	Exonuclease
AL549_RS15730	PF00990	GGDEF domain
AL549_RS15730	PF03924	CHASE domain
AL549_RS15735	PF10816	AL549_RS15735
AL549_RS15740	PF00012	Hsp70 protein
AL549_RS15745	PF00012	Hsp70 protein
AL549_RS15745	PF12531	AL549_RS15745
AL549_RS15755	PF05656	AL549_RS15755
AL549_RS15760	PF12833	Helix-turn-helix domain
AL549_RS15765	PF03352	Methyladenine glycosylase
AL549_RS15770	PF13302	Acetyltransferase (GNAT) domain
AL549_RS15775	PF00990	GGDEF domain
AL549_RS15780	PF09084	NMT1/THI5 like
AL549_RS15785	PF07963	Prokaryotic N-terminal methylation motif
AL549_RS15790	PF02449	Beta-galactosidase
AL549_RS15790	PF16116	AL549_RS15790
AL549_RS15800	PF00534	Glycosyl transferases group 1
AL549_RS15800	PF13439	Glycosyltransferase Family 4
AL549_RS15805	PF00534	Glycosyl transferases group 1
AL549_RS15805	PF13439	Glycosyltransferase Family 4
AL549_RS15810	PF00535	Glycosyl transferase family 2
AL549_RS15825	PF13807	AL549_RS15825
AL549_RS15830	PF02563	Polysaccharide biosynthesis/export protein
AL549_RS15830	PF10531	SLBB domain
AL549_RS15840	PF02397	AL549_RS15840
AL549_RS15840	PF13727	CoA-binding domain
AL549_RS15845	PF01235	AL549_RS15845
AL549_RS15850	PF00005	ABC transporter
AL549_RS15850	PF00664	ABC transporter transmembrane region
AL549_RS15855	PF00005	ABC transporter
AL549_RS15855	PF00664	ABC transporter transmembrane region
AL549_RS15870	PF00210	Ferritin-like domain
AL549_RS15875	PF13487	HD domain
AL549_RS15880	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_RS15885	PF03222	Tryptophan/tyrosine permease family
AL549_RS15890	PF00781	Diacylglycerol kinase catalytic domain
AL549_RS15895	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS15900	PF01734	Patatin-like phospholipase
AL549_RS15905	PF01966	HD domain
AL549_RS15910	PF13640	2OG-Fe(II) oxygenase superfamily
AL549_RS15915	PF14321	AL549_RS15915
AL549_RS15920	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS15920	PF03466	LysR substrate binding domain
AL549_RS15925	PF04055	Radical SAM superfamily
AL549_RS15925	PF13353	4Fe-4S single cluster domain
AL549_RS15930	PF11230	AL549_RS15930
AL549_RS15935	PF00563	EAL domain
AL549_RS15935	PF00990	GGDEF domain
AL549_RS15935	PF05228	AL549_RS15935
AL549_RS15935	PF13426	PAS domain
AL549_RS15940	PF01966	HD domain
AL549_RS15940	PF11871	AL549_RS15940
AL549_RS15945	PF03547	AL549_RS15945
AL549_RS15950	PF00563	EAL domain
AL549_RS15950	PF00990	GGDEF domain
AL549_RS15950	PF08447	PAS fold
AL549_RS15955	PF00990	GGDEF domain
AL549_RS15960	PF00072	Response regulator receiver domain
AL549_RS15965	PF00027	Cyclic nucleotide-binding domain
AL549_RS15965	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS15970	PF00939	Sodium:sulfate symporter transmembrane region
AL549_RS15975	PF11163	AL549_RS15975
AL549_RS15980	PF13023	HD domain
AL549_RS15985	PF13302	Acetyltransferase (GNAT) domain
AL549_RS15990	PF00158	Sigma-54 interaction domain
AL549_RS15990	PF00989	PAS fold
AL549_RS15995	PF05128	AL549_RS15995
AL549_RS16000	PF04317	AL549_RS16000
AL549_RS16010	PF05681	AL549_RS16010
AL549_RS16010	PF05683	Fumarase C-terminus
AL549_RS16015	PF00425	chorismate binding enzyme
AL549_RS16015	PF04715	Anthranilate synthase component I, N terminal region
AL549_RS16025	PF00072	Response regulator receiver domain
AL549_RS16025	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS16025	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS16030	PF07700	Heme NO binding
AL549_RS16035	PF00293	NUDIX domain
AL549_RS16040	PF03222	Tryptophan/tyrosine permease family
AL549_RS16045	PF03313	AL549_RS16045
AL549_RS16045	PF03315	Serine dehydratase beta chain
AL549_RS16050	PF00563	EAL domain
AL549_RS16055	PF00583	Acetyltransferase (GNAT) family
AL549_RS16060	PF01242	6-pyruvoyl tetrahydropterin synthase
AL549_RS16065	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS16070	PF00152	tRNA synthetases class II (D, K and N)
AL549_RS16070	PF01336	OB-fold nucleic acid binding domain
AL549_RS16080	PF00155	Aminotransferase class I and II
AL549_RS16080	PF00392	Bacterial regulatory proteins, gntR family
AL549_RS16095	PF01966	HD domain
AL549_RS16100	PF00155	Aminotransferase class I and II
AL549_RS16110	PF00027	Cyclic nucleotide-binding domain
AL549_RS16110	PF00571	CBS domain
AL549_RS16110	PF03445	AL549_RS16110
AL549_RS16110	PF10335	AL549_RS16110
AL549_RS16115	PF00929	Exonuclease
AL549_RS16120	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS16120	PF00672	HAMP domain
AL549_RS16120	PF02743	Cache domain
AL549_RS16125	PF02028	BCCT family transporter
AL549_RS16130	PF01047	MarR family
AL549_RS16135	PF00072	Response regulator receiver domain
AL549_RS16135	PF00196	Bacterial regulatory proteins, luxR family
AL549_RS16140	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS16140	PF07730	Histidine kinase
AL549_RS16140	PF17200	AL549_RS16140
AL549_RS16145	PF06808	AL549_RS16145
AL549_RS16150	PF04290	AL549_RS16150
AL549_RS16155	PF03480	Bacterial extracellular solute-binding protein, family 7
AL549_RS16160	PF01609	Transposase DDE domain
AL549_RS16160	PF13006	AL549_RS16160
AL549_RS16165	PF00925	GTP cyclohydrolase II
AL549_RS16170	PF01609	Transposase DDE domain
AL549_RS16170	PF13006	AL549_RS16170
AL549_RS16175	PF00392	Bacterial regulatory proteins, gntR family
AL549_RS16175	PF07840	FadR C-terminal domain
AL549_RS16180	PF06450	AL549_RS16180
AL549_RS16185	PF02600	Disulfide bond formation protein DsbB
AL549_RS16190	PF02810	SEC-C motif
AL549_RS16195	PF01207	Dihydrouridine synthase (Dus)
AL549_RS16200	PF00990	GGDEF domain
AL549_RS16205	PF00128	Alpha amylase, catalytic domain
AL549_RS16205	PF02903	Alpha amylase, N-terminal ig-like domain
AL549_RS16210	PF00005	ABC transporter
AL549_RS16215	PF02653	AL549_RS16215
AL549_RS16220	PF04392	ABC transporter substrate binding protein
AL549_RS16225	PF04217	AL549_RS16225
AL549_RS16230	PF00871	Acetokinase family
AL549_RS16235	PF01515	Phosphate acetyl/butaryl transferase
AL549_RS16235	PF07085	DRTGG domain
AL549_RS16235	PF13500	AAA domain
AL549_RS16240	PF01717	Cobalamin-independent synthase, Catalytic domain
AL549_RS16240	PF08267	Cobalamin-independent synthase, N-terminal domain
AL549_RS16245	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS16245	PF03466	LysR substrate binding domain
AL549_RS16250	PF14056	AL549_RS16250
AL549_RS16260	PF00563	EAL domain
AL549_RS16260	PF00571	CBS domain
AL549_RS16260	PF00989	PAS fold
AL549_RS16265	PF00563	EAL domain
AL549_RS16265	PF13426	PAS domain
AL549_RS16270	PF04055	Radical SAM superfamily
AL549_RS16270	PF08497	AL549_RS16270
AL549_RS16270	PF11842	AL549_RS16270
AL549_RS16275	PF00563	EAL domain
AL549_RS16275	PF00990	GGDEF domain
AL549_RS16275	PF08269	Cache domain
AL549_RS16280	PF00291	Pyridoxal-phosphate dependent enzyme
AL549_RS16285	PF00916	AL549_RS16285
AL549_RS16285	PF01740	STAS domain
AL549_RS16290	PF12833	Helix-turn-helix domain
AL549_RS16290	PF12852	Cupin
AL549_RS16295	PF02627	Carboxymuconolactone decarboxylase family
AL549_RS16300	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_RS16300	PF12793	AL549_RS16300
AL549_RS16310	PF03741	AL549_RS16310
AL549_RS16315	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL549_RS16315	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL549_RS16320	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS16320	PF12729	AL549_RS16320
AL549_RS16325	PF13419	Haloacid dehalogenase-like hydrolase
AL549_RS16330	PF12680	SnoaL-like domain
AL549_RS16335	PF06042	Bacterial protein of unknown function (DUF925)
AL549_RS16340	PF04229	GrpB protein
AL549_RS16345	PF13521	AAA domain
AL549_RS16350	PF13302	Acetyltransferase (GNAT) domain
AL549_RS16355	PF13453	AL549_RS16355
AL549_RS16360	PF01381	Helix-turn-helix
AL549_RS16365	PF07804	HipA-like C-terminal domain
AL549_RS16365	PF13657	HipA N-terminal domain
AL549_RS16370	PF13489	Methyltransferase domain
AL549_RS16375	PF00271	Helicase conserved C-terminal domain
AL549_RS16375	PF04851	Type III restriction enzyme, res subunit
AL549_RS16375	PF13091	PLD-like domain
AL549_RS16385	PF06610	AL549_RS16385
AL549_RS16390	PF00072	Response regulator receiver domain
AL549_RS16390	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS16390	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS16390	PF02743	Cache domain
AL549_RS16395	PF03695	Uncharacterised protein family (UPF0149)
AL549_RS16400	PF03738	Glutathionylspermidine synthase preATP-grasp
AL549_RS16405	PF06693	AL549_RS16405
AL549_RS16410	PF03994	AL549_RS16410
AL549_RS16415	PF07885	Ion channel
AL549_RS16420	PF02445	Quinolinate synthetase A protein
AL549_RS16425	PF07719	Tetratricopeptide repeat
AL549_RS16425	PF13432	Tetratricopeptide repeat
AL549_RS16425	PF16331	AL549_RS16425
AL549_RS16430	PF00691	OmpA family
AL549_RS16435	PF04052	TolB amino-terminal domain
AL549_RS16435	PF07676	WD40-like Beta Propeller Repeat
AL549_RS16440	PF06519	TolA C-terminal
AL549_RS16445	PF02472	Biopolymer transport protein ExbD/TolR
AL549_RS16450	PF01618	AL549_RS16450
AL549_RS16455	PF03061	Thioesterase superfamily
AL549_RS16460	PF09600	AL549_RS16460
AL549_RS16465	PF08173	AL549_RS16465
AL549_RS16470	PF02322	AL549_RS16470
AL549_RS16475	PF01654	AL549_RS16475
AL549_RS16480	PF05491	Holliday junction DNA helicase ruvB C-terminus
AL549_RS16480	PF05496	Holliday junction DNA helicase ruvB N-terminus
AL549_RS16485	PF01330	RuvA N terminal domain
AL549_RS16485	PF07499	RuvA, C-terminal domain
AL549_RS16485	PF14520	Helix-hairpin-helix domain
AL549_RS16490	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS16495	PF02075	Crossover junction endodeoxyribonuclease RuvC
AL549_RS16500	PF00152	tRNA synthetases class II (D, K and N)
AL549_RS16500	PF01336	OB-fold nucleic acid binding domain
AL549_RS16500	PF02938	GAD domain
AL549_RS16505	PF01904	Protein of unknown function DUF72
AL549_RS16510	PF13649	Methyltransferase domain
AL549_RS16515	PF08003	Protein of unknown function (DUF1698)
AL549_RS16520	PF05618	Putative ATP-dependant zinc protease
AL549_RS16525	PF14400	AL549_RS16525
AL549_RS16525	PF14402	AL549_RS16525
AL549_RS16530	PF14397	AL549_RS16530
AL549_RS16535	PF00732	GMC oxidoreductase
AL549_RS16535	PF05199	GMC oxidoreductase
AL549_RS16540	PF00171	Aldehyde dehydrogenase family
AL549_RS16545	PF12625	AL549_RS16545
AL549_RS16545	PF12833	Helix-turn-helix domain
AL549_RS16550	PF04310	MukB N-terminal
AL549_RS16550	PF13558	Putative exonuclease SbcCD, C subunit
AL549_RS16550	PF16330	AL549_RS16550
AL549_RS16555	PF04288	MukE-like family
AL549_RS16560	PF03882	KicB killing factor
AL549_RS16560	PF17192	AL549_RS16560
AL549_RS16560	PF17193	AL549_RS16560
AL549_RS16565	PF13847	Methyltransferase domain
AL549_RS16570	PF02698	DUF218 domain
AL549_RS16575	PF00072	Response regulator receiver domain
AL549_RS16575	PF00486	Transcriptional regulatory protein, C terminal
AL549_RS16580	PF02613	Nitrate reductase delta subunit
AL549_RS16585	PF00356	Bacterial regulatory proteins, lacI family
AL549_RS16585	PF13377	Periplasmic binding protein-like domain
AL549_RS16590	PF04993	TfoX N-terminal domain
AL549_RS16590	PF04994	TfoX C-terminal domain
AL549_RS16595	PF09335	AL549_RS16595
AL549_RS16600	PF09413	Domain of unknown function (DUF2007)
AL549_RS16605	PF00561	alpha/beta hydrolase fold
AL549_RS16610	PF00534	Glycosyl transferases group 1
AL549_RS16610	PF08323	Starch synthase catalytic domain
AL549_RS16615	PF00483	Nucleotidyl transferase
AL549_RS16625	PF01131	DNA topoisomerase
AL549_RS16625	PF01396	AL549_RS16625
AL549_RS16625	PF01751	Toprim domain
AL549_RS16625	PF08272	Topoisomerase I zinc-ribbon-like
AL549_RS16630	PF10692	Protein of unknown function (DUF2498)
AL549_RS16635	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AL549_RS16640	PF05433	AL549_RS16640
AL549_RS16645	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
AL549_RS16650	PF04376	AL549_RS16650
AL549_RS16650	PF04377	AL549_RS16650
AL549_RS16655	PF01176	Translation initiation factor 1A / IF-1
AL549_RS16660	PF00004	ATPase family associated with various cellular activities (AAA)
AL549_RS16660	PF02861	Clp amino terminal domain
AL549_RS16660	PF07724	AAA domain (Cdc48 subfamily)
AL549_RS16660	PF10431	C-terminal, D2-small domain, of ClpB protein
AL549_RS16665	PF02617	ATP-dependent Clp protease adaptor protein ClpS
AL549_RS16670	PF00313	'Cold-shock' DNA-binding domain
AL549_RS16675	PF03971	Monomeric isocitrate dehydrogenase
AL549_RS16680	PF00849	RNA pseudouridylate synthase
AL549_RS16685	PF09829	AL549_RS16685
AL549_RS16690	PF13609	Gram-negative porin
AL549_RS16695	PF06733	DEAD_2
AL549_RS16695	PF13307	Helicase C-terminal domain
AL549_RS16700	PF01925	AL549_RS16700
AL549_RS16705	PF07445	Primosomal replication protein priB and priC
AL549_RS16710	PF10689	AL549_RS16710
AL549_RS16715	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS16715	PF00672	HAMP domain
AL549_RS16715	PF02743	Cache domain
AL549_RS16720	PF03372	Endonuclease/Exonuclease/phosphatase family
AL549_RS16725	PF17291	AL549_RS16725
AL549_RS16730	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS16735	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS16740	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS16745	PF00005	ABC transporter
AL549_RS16755	PF11840	AL549_RS16755
AL549_RS16760	PF01228	Glycine radical
AL549_RS16760	PF02901	Pyruvate formate lyase
AL549_RS16765	PF09982	Uncharacterized protein conserved in bacteria (DUF2219)
AL549_RS16770	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS16775	PF04055	Radical SAM superfamily
AL549_RS16775	PF13353	4Fe-4S single cluster domain
AL549_RS16780	PF01891	Cobalt uptake substrate-specific transmembrane region
AL549_RS16785	PF03887	YfbU domain
AL549_RS16790	PF06798	AL549_RS16790
AL549_RS16790	PF08298	PrkA AAA domain
AL549_RS16795	PF04285	AL549_RS16795
AL549_RS16800	PF04293	AL549_RS16800
AL549_RS16805	PF00990	GGDEF domain
AL549_RS16810	PF02348	Cytidylyltransferase
AL549_RS16815	PF03966	Trm112p-like protein
AL549_RS16820	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
AL549_RS16825	PF00005	ABC transporter
AL549_RS16825	PF00664	ABC transporter transmembrane region
AL549_RS16830	PF00753	Metallo-beta-lactamase superfamily
AL549_RS16830	PF03772	AL549_RS16830
AL549_RS16830	PF13567	AL549_RS16830
AL549_RS16835	PF09835	AL549_RS16835
AL549_RS16840	PF02687	AL549_RS16840
AL549_RS16840	PF12704	MacB-like periplasmic core domain
AL549_RS16845	PF00005	ABC transporter
AL549_RS16850	PF02687	AL549_RS16850
AL549_RS16850	PF12704	MacB-like periplasmic core domain
AL549_RS16860	PF00270	DEAD/DEAH box helicase
AL549_RS16860	PF00271	Helicase conserved C-terminal domain
AL549_RS16860	PF02559	CarD-like/TRCF domain
AL549_RS16860	PF03461	TRCF domain
AL549_RS16865	PF10972	AL549_RS16865
AL549_RS16870	PF13302	Acetyltransferase (GNAT) domain
AL549_RS16875	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_RS16880	PF05728	Uncharacterised protein family (UPF0227)
AL549_RS16885	PF01636	Phosphotransferase enzyme family
AL549_RS16890	PF13036	Protein of unknown function (DUF3897)
AL549_RS16895	PF07233	Protein of unknown function (DUF1425)
AL549_RS16905	PF01230	HIT domain
AL549_RS16910	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS16910	PF12729	AL549_RS16910
AL549_RS16915	PF09002	Domain of unknown function (DUF1887)
AL549_RS16920	PF01048	Phosphorylase superfamily
AL549_RS16925	PF00122	E1-E2 ATPase
AL549_RS16925	PF00403	Heavy-metal-associated domain
AL549_RS16925	PF00702	haloacid dehalogenase-like hydrolase
AL549_RS16930	PF00571	CBS domain
AL549_RS16935	PF00990	GGDEF domain
AL549_RS16935	PF08448	PAS fold
AL549_RS16940	PF01276	Orn/Lys/Arg decarboxylase, major domain
AL549_RS16940	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
AL549_RS16940	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AL549_RS16945	PF13520	Amino acid permease
AL549_RS16950	PF00486	Transcriptional regulatory protein, C terminal
AL549_RS16955	PF07221	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
AL549_RS16960	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS16960	PF00672	HAMP domain
AL549_RS16960	PF02743	Cache domain
AL549_RS16965	PF11008	AL549_RS16965
AL549_RS16970	PF00990	GGDEF domain
AL549_RS16975	PF01769	Divalent cation transporter
AL549_RS17010	PF13676	TIR domain
AL549_RS17015	PF00589	Phage integrase family
AL549_RS17020	PF07693	AL549_RS17020
AL549_RS17035	PF13476	AAA domain
AL549_RS17050	PF00589	Phage integrase family
AL549_RS17060	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
AL549_RS17060	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
AL549_RS17065	PF13847	Methyltransferase domain
AL549_RS17070	PF04187	Protein of unknown function, DUF399
AL549_RS17080	PF00245	Alkaline phosphatase
AL549_RS17085	PF13467	Ribbon-helix-helix domain
AL549_RS17090	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_RS17095	PF03992	Antibiotic biosynthesis monooxygenase
AL549_RS17100	PF03692	AL549_RS17100
AL549_RS17105	PF03692	AL549_RS17105
AL549_RS17110	PF00230	Major intrinsic protein
AL549_RS17115	PF00072	Response regulator receiver domain
AL549_RS17115	PF00486	Transcriptional regulatory protein, C terminal
AL549_RS17120	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS17120	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS17125	PF11059	AL549_RS17125
AL549_RS17135	PF02132	RecR protein
AL549_RS17135	PF13662	Toprim domain
AL549_RS17140	PF02575	YbaB/EbfC DNA-binding family
AL549_RS17145	PF12168	AL549_RS17145
AL549_RS17145	PF12169	DNA polymerase III subunits gamma and tau domain III
AL549_RS17145	PF12170	DNA polymerase III tau subunit V interacting with alpha
AL549_RS17145	PF13177	DNA polymerase III, delta subunit
AL549_RS17150	PF00156	Phosphoribosyl transferase domain
AL549_RS17155	PF04304	AL549_RS17155
AL549_RS17165	PF00072	Response regulator receiver domain
AL549_RS17170	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS17170	PF03466	LysR substrate binding domain
AL549_RS17175	PF00156	Phosphoribosyl transferase domain
AL549_RS17175	PF13522	Glutamine amidotransferase domain
AL549_RS17180	PF02674	AL549_RS17180
AL549_RS17185	PF05036	Sporulation related domain
AL549_RS17190	PF02875	Mur ligase family, glutamate ligase domain
AL549_RS17190	PF08245	Mur ligase middle domain
AL549_RS17195	PF01039	Carboxyl transferase domain
AL549_RS17200	PF01416	tRNA pseudouridine synthase
AL549_RS17210	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL549_RS17210	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL549_RS17215	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL549_RS17215	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL549_RS17215	PF11890	Domain of unknown function (DUF3410)
AL549_RS17220	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL549_RS17220	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL549_RS17225	PF01266	FAD dependent oxidoreductase
AL549_RS17225	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
AL549_RS17230	PF08891	AL549_RS17230
AL549_RS17235	PF04315	AL549_RS17235
AL549_RS17240	PF03458	AL549_RS17240
AL549_RS17245	PF01264	Chorismate synthase
AL549_RS17250	PF05175	Methyltransferase small domain
AL549_RS17255	PF01713	Smr domain
AL549_RS17260	PF00300	Histidine phosphatase superfamily (branch 1)
AL549_RS17270	PF00675	Insulinase (Peptidase family M16)
AL549_RS17270	PF05193	Peptidase M16 inactive domain
AL549_RS17270	PF16187	AL549_RS17270
AL549_RS17275	PF00378	Enoyl-CoA hydratase/isomerase family
AL549_RS17275	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL549_RS17275	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL549_RS17280	PF00108	Thiolase, N-terminal domain
AL549_RS17280	PF02803	Thiolase, C-terminal domain
AL549_RS17285	PF04542	Sigma-70 region 2
AL549_RS17285	PF08281	Sigma-70, region 4
AL549_RS17290	PF11859	AL549_RS17290
AL549_RS17295	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL549_RS17300	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL549_RS17305	PF04333	AL549_RS17305
AL549_RS17310	PF14559	Tetratricopeptide repeat
AL549_RS17315	PF03918	Cytochrome C biogenesis protein
AL549_RS17320	PF08534	Redoxin
AL549_RS17325	PF01578	AL549_RS17325
AL549_RS17325	PF16327	AL549_RS17325
AL549_RS17330	PF03100	CcmE
AL549_RS17335	PF04995	AL549_RS17335
AL549_RS17340	PF01578	AL549_RS17340
AL549_RS17345	PF03379	AL549_RS17345
AL549_RS17350	PF00005	ABC transporter
AL549_RS17355	PF10975	AL549_RS17355
AL549_RS17360	PF01584	CheW-like domain
AL549_RS17365	PF01584	CheW-like domain
AL549_RS17370	PF13614	AAA domain
AL549_RS17375	PF00072	Response regulator receiver domain
AL549_RS17375	PF01339	CheB methylesterase
AL549_RS17380	PF01584	CheW-like domain
AL549_RS17380	PF01627	Hpt domain
AL549_RS17380	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS17380	PF02895	Signal transducing histidine kinase, homodimeric domain
AL549_RS17385	PF04344	Chemotaxis phosphatase, CheZ
AL549_RS17390	PF00072	Response regulator receiver domain
AL549_RS17395	PF04539	Sigma-70 region 3
AL549_RS17395	PF04542	Sigma-70 region 2
AL549_RS17395	PF04545	Sigma-70, region 4
AL549_RS17400	PF10609	ParA/MinD ATPase like
AL549_RS17405	PF00448	SRP54-type protein, GTPase domain
AL549_RS17410	PF00771	FHIPEP family
AL549_RS17415	PF01312	FlhB HrpN YscU SpaS Family
AL549_RS17420	PF01311	AL549_RS17420
AL549_RS17425	PF01313	AL549_RS17425
AL549_RS17430	PF00813	AL549_RS17430
AL549_RS17435	PF04347	AL549_RS17435
AL549_RS17440	PF01052	Surface presentation of antigens (SPOA)
AL549_RS17445	PF01052	Surface presentation of antigens (SPOA)
AL549_RS17445	PF02154	Flagellar motor switch protein FliM
AL549_RS17450	PF03748	AL549_RS17450
AL549_RS17455	PF02120	Flagellar hook-length control protein FliK
AL549_RS17460	PF02050	Flagellar FliJ protein
AL549_RS17465	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL549_RS17470	PF02108	AL549_RS17470
AL549_RS17475	PF01706	FliG C-terminal domain
AL549_RS17475	PF14841	FliG middle domain
AL549_RS17475	PF14842	FliG N-terminal domain
AL549_RS17480	PF01514	Secretory protein of YscJ/FliF family
AL549_RS17480	PF08345	AL549_RS17480
AL549_RS17485	PF02049	AL549_RS17485
AL549_RS17490	PF00072	Response regulator receiver domain
AL549_RS17490	PF00158	Sigma-54 interaction domain
AL549_RS17490	PF02954	Bacterial regulatory protein, Fis family
AL549_RS17495	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS17495	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS17495	PF13188	PAS domain
AL549_RS17500	PF00158	Sigma-54 interaction domain
AL549_RS17500	PF02954	Bacterial regulatory protein, Fis family
AL549_RS17500	PF06490	AL549_RS17500
AL549_RS17505	PF02561	Flagellar protein FliS
AL549_RS17515	PF02465	AL549_RS17515
AL549_RS17515	PF07195	AL549_RS17515
AL549_RS17515	PF07196	Flagellin hook IN motif
AL549_RS17520	PF03646	FlaG protein
AL549_RS17525	PF00669	Bacterial flagellin N-terminal helical region
AL549_RS17525	PF00700	Bacterial flagellin C-terminal helical region
AL549_RS17525	PF07196	Flagellin hook IN motif
AL549_RS17530	PF00669	Bacterial flagellin N-terminal helical region
AL549_RS17530	PF00700	Bacterial flagellin C-terminal helical region
AL549_RS17530	PF07196	Flagellin hook IN motif
AL549_RS17535	PF00669	Bacterial flagellin N-terminal helical region
AL549_RS17535	PF00700	Bacterial flagellin C-terminal helical region
AL549_RS17535	PF07196	Flagellin hook IN motif
AL549_RS17540	PF04261	Dyp-type peroxidase family
AL549_RS17545	PF11143	AL549_RS17545
AL549_RS17550	PF11169	AL549_RS17550
AL549_RS17555	PF13698	AL549_RS17555
AL549_RS17560	PF09904	Winged helix-turn helix
AL549_RS17565	PF03960	ArsC family
AL549_RS17570	PF01546	Peptidase family M20/M25/M40
AL549_RS17570	PF07687	Peptidase dimerisation domain
AL549_RS17575	PF02557	D-alanyl-D-alanine carboxypeptidase
AL549_RS17580	PF11446	AL549_RS17580
AL549_RS17585	PF01609	Transposase DDE domain
AL549_RS17585	PF13006	AL549_RS17585
AL549_RS17590	PF06804	NlpB/DapX lipoprotein
AL549_RS17595	PF00701	Dihydrodipicolinate synthetase family
AL549_RS17600	PF13740	ACT domain
AL549_RS17605	PF00578	AhpC/TSA family
AL549_RS17610	PF01594	AL549_RS17610
AL549_RS17615	PF01206	Sulfurtransferase TusA
AL549_RS17620	PF01435	Peptidase family M48
AL549_RS17620	PF14559	Tetratricopeptide repeat
AL549_RS17625	PF03960	ArsC family
AL549_RS17630	PF03358	NADPH-dependent FMN reductase
AL549_RS17635	PF09842	AL549_RS17635
AL549_RS17640	PF09839	AL549_RS17640
AL549_RS17645	PF00860	Permease family
AL549_RS17650	PF14681	Uracil phosphoribosyltransferase
AL549_RS17655	PF00586	AIR synthase related protein, N-terminal domain
AL549_RS17655	PF02769	AIR synthase related protein, C-terminal domain
AL549_RS17660	PF00551	Formyl transferase
AL549_RS17665	PF13230	Glutamine amidotransferases class-II
AL549_RS17670	PF13580	SIS domain
AL549_RS17675	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL549_RS17675	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL549_RS17675	PF09317	AL549_RS17675
AL549_RS17695	PF00999	Sodium/hydrogen exchanger family
AL549_RS17695	PF02254	TrkA-N domain
AL549_RS17700	PF02525	Flavodoxin-like fold
AL549_RS17710	PF00929	Exonuclease
AL549_RS17715	PF00075	RNase H
AL549_RS17720	PF08241	Methyltransferase domain
AL549_RS17725	PF00753	Metallo-beta-lactamase superfamily
AL549_RS17725	PF16123	AL549_RS17725
AL549_RS17730	PF01464	Transglycosylase SLT domain
AL549_RS17730	PF01476	LysM domain
AL549_RS17730	PF06474	AL549_RS17730
AL549_RS17735	PF06930	AL549_RS17735
AL549_RS17740	PF03372	Endonuclease/Exonuclease/phosphatase family
AL549_RS17745	PF00543	Nitrogen regulatory protein P-II
AL549_RS17750	PF00034	Cytochrome c
AL549_RS17755	PF01171	PP-loop family
AL549_RS17755	PF09179	TilS substrate binding domain
AL549_RS17755	PF11734	TilS substrate C-terminal domain
AL549_RS17760	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
AL549_RS17765	PF01336	OB-fold nucleic acid binding domain
AL549_RS17765	PF02811	PHP domain
AL549_RS17765	PF07733	Bacterial DNA polymerase III alpha subunit
AL549_RS17765	PF14579	Helix-hairpin-helix motif
AL549_RS17770	PF01351	Ribonuclease HII
AL549_RS17775	PF02684	AL549_RS17775
AL549_RS17780	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_RS17780	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
AL549_RS17785	PF07977	FabA-like domain
AL549_RS17790	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_RS17790	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
AL549_RS17795	PF03938	Outer membrane protein (OmpH-like)
AL549_RS17800	PF01103	Surface antigen
AL549_RS17800	PF07244	Surface antigen variable number repeat
AL549_RS17810	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
AL549_RS17810	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
AL549_RS17810	PF13288	DXP reductoisomerase C-terminal domain
AL549_RS17815	PF01148	Cytidylyltransferase family
AL549_RS17820	PF01255	Putative undecaprenyl diphosphate synthase
AL549_RS17825	PF01765	Ribosome recycling factor
AL549_RS17830	PF00696	Amino acid kinase family
AL549_RS17835	PF00889	Elongation factor TS
AL549_RS17840	PF00318	Ribosomal protein S2
AL549_RS17845	PF00557	Metallopeptidase family M24
AL549_RS17850	PF01909	Nucleotidyltransferase domain
AL549_RS17850	PF01966	HD domain
AL549_RS17850	PF08335	GlnD PII-uridylyltransferase
AL549_RS17855	PF11944	AL549_RS17855
AL549_RS17860	PF00849	RNA pseudouridylate synthase
AL549_RS17865	PF04287	tRNA pseudouridine synthase C
AL549_RS17870	PF12069	AL549_RS17870
AL549_RS17875	PF11743	AL549_RS17875
AL549_RS17880	PF13302	Acetyltransferase (GNAT) domain
AL549_RS17895	PF02639	AL549_RS17895
AL549_RS17900	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AL549_RS17900	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL549_RS17905	PF01370	NAD dependent epimerase/dehydratase family
AL549_RS17910	PF00753	Metallo-beta-lactamase superfamily
AL549_RS17920	PF02655	ATP-grasp domain
AL549_RS17925	PF03806	AL549_RS17925
AL549_RS17930	PF00444	Ribosomal protein L36
AL549_RS17935	PF01197	Ribosomal protein L31
AL549_RS17940	PF01980	Uncharacterised protein family UPF0066
AL549_RS17945	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL549_RS17945	PF03129	Anticodon binding domain
AL549_RS17945	PF04073	Aminoacyl-tRNA editing domain
AL549_RS17950	PF04391	AL549_RS17950
AL549_RS17955	PF06786	AL549_RS17955
AL549_RS17960	PF14056	AL549_RS17960
AL549_RS17965	PF00209	Sodium:neurotransmitter symporter family
AL549_RS17970	PF00704	Glycosyl hydrolases family 18
AL549_RS17975	PF11101	AL549_RS17975
AL549_RS17980	PF00270	DEAD/DEAH box helicase
AL549_RS17980	PF00271	Helicase conserved C-terminal domain
AL549_RS17980	PF16124	AL549_RS17980
AL549_RS17985	PF00817	impB/mucB/samB family
AL549_RS17985	PF11799	impB/mucB/samB family C-terminal domain
AL549_RS17990	PF00072	Response regulator receiver domain
AL549_RS17990	PF00990	GGDEF domain
AL549_RS17995	PF04400	AL549_RS17995
AL549_RS18000	PF02424	ApbE family
AL549_RS18005	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL549_RS18005	PF00175	Oxidoreductase NAD-binding domain
AL549_RS18005	PF00970	Oxidoreductase FAD-binding domain
AL549_RS18010	PF02508	AL549_RS18010
AL549_RS18015	PF02508	AL549_RS18015
AL549_RS18020	PF04205	FMN-binding domain
AL549_RS18025	PF03116	AL549_RS18025
AL549_RS18030	PF05896	AL549_RS18030
AL549_RS18030	PF11973	AL549_RS18030
AL549_RS18035	PF01722	BolA-like protein
AL549_RS18040	PF05175	Methyltransferase small domain
AL549_RS18040	PF08468	Methyltransferase small domain N-terminal
AL549_RS18045	PF03923	AL549_RS18045
AL549_RS18050	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AL549_RS18055	PF07690	Major Facilitator Superfamily
AL549_RS18060	PF12973	ChrR Cupin-like domain
AL549_RS18060	PF13490	Putative zinc-finger
AL549_RS18065	PF04542	Sigma-70 region 2
AL549_RS18065	PF04545	Sigma-70, region 4
AL549_RS18070	PF02190	ATP-dependent protease La (LON) domain
AL549_RS18075	PF03502	Nucleoside-specific channel-forming protein, Tsx
AL549_RS18080	PF02558	Ketopantoate reductase PanE/ApbA
AL549_RS18080	PF08546	Ketopantoate reductase PanE/ApbA C terminal
AL549_RS18085	PF01965	DJ-1/PfpI family
AL549_RS18090	PF00266	Aminotransferase class-V
AL549_RS18095	PF02657	Fe-S metabolism associated domain
AL549_RS18100	PF00899	ThiF family
AL549_RS18105	PF03562	MltA specific insert domain
AL549_RS18105	PF06725	3D domain
AL549_RS18110	PF11012	AL549_RS18110
AL549_RS18115	PF00583	Acetyltransferase (GNAT) family
AL549_RS18115	PF00696	Amino acid kinase family
AL549_RS18125	PF13538	UvrD-like helicase C-terminal domain
AL549_RS18125	PF13604	AAA domain
AL549_RS18130	PF00580	UvrD/REP helicase N-terminal domain
AL549_RS18130	PF12705	PD-(D/E)XK nuclease superfamily
AL549_RS18130	PF13361	UvrD-like helicase C-terminal domain
AL549_RS18135	PF04257	Exodeoxyribonuclease V, gamma subunit
AL549_RS18140	PF00884	Sulfatase
AL549_RS18140	PF11893	AL549_RS18140
AL549_RS18145	PF03595	Voltage-dependent anion channel
AL549_RS18150	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS18150	PF03466	LysR substrate binding domain
AL549_RS18155	PF07130	YebG protein
AL549_RS18160	PF14602	Hexapeptide repeat of succinyl-transferase
AL549_RS18160	PF14789	Tetrahydrodipicolinate N-succinyltransferase middle
AL549_RS18165	PF00230	Major intrinsic protein
AL549_RS18170	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AL549_RS18170	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AL549_RS18175	PF00455	AL549_RS18175
AL549_RS18175	PF08220	DeoR-like helix-turn-helix domain
AL549_RS18180	PF01266	FAD dependent oxidoreductase
AL549_RS18180	PF16901	AL549_RS18180
AL549_RS18185	PF01544	CorA-like Mg2+ transporter protein
AL549_RS18190	PF11814	AL549_RS18190
AL549_RS18190	PF13673	Acetyltransferase (GNAT) domain
AL549_RS18195	PF08443	RimK-like ATP-grasp domain
AL549_RS18195	PF14401	AL549_RS18195
AL549_RS18200	PF05940	AL549_RS18200
AL549_RS18205	PF06094	AIG2-like family
AL549_RS18210	PF13505	Outer membrane protein beta-barrel domain
AL549_RS18215	PF01588	Putative tRNA binding domain
AL549_RS18220	PF00356	Bacterial regulatory proteins, lacI family
AL549_RS18220	PF13377	Periplasmic binding protein-like domain
AL549_RS18225	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS18225	PF00672	HAMP domain
AL549_RS18225	PF17200	AL549_RS18225
AL549_RS18230	PF01263	Aldose 1-epimerase
AL549_RS18235	PF00288	GHMP kinases N terminal domain
AL549_RS18235	PF08544	GHMP kinases C terminal
AL549_RS18235	PF10509	Galactokinase galactose-binding signature
AL549_RS18240	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
AL549_RS18240	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
AL549_RS18245	PF16363	AL549_RS18245
AL549_RS18250	PF00356	Bacterial regulatory proteins, lacI family
AL549_RS18250	PF13377	Periplasmic binding protein-like domain
AL549_RS18255	PF13472	GDSL-like Lipase/Acylhydrolase family
AL549_RS18260	PF00703	Glycosyl hydrolases family 2
AL549_RS18260	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
AL549_RS18260	PF02837	Glycosyl hydrolases family 2, sugar binding domain
AL549_RS18260	PF02929	Beta galactosidase small chain
AL549_RS18260	PF16353	AL549_RS18260
AL549_RS18265	PF04074	Domain of unknown function (DUF386)
AL549_RS18270	PF13520	Amino acid permease
AL549_RS18275	PF13520	Amino acid permease
AL549_RS18280	PF01204	Trehalase
AL549_RS18290	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS18290	PF03466	LysR substrate binding domain
AL549_RS18295	PF02417	AL549_RS18295
AL549_RS18300	PF07719	Tetratricopeptide repeat
AL549_RS18300	PF13181	Tetratricopeptide repeat
AL549_RS18300	PF13432	Tetratricopeptide repeat
AL549_RS18305	PF00482	Type II secretion system (T2SS), protein F
AL549_RS18310	PF00482	Type II secretion system (T2SS), protein F
AL549_RS18315	PF00437	Type II/IV secretion system protein
AL549_RS18325	PF07811	AL549_RS18325
AL549_RS18330	PF07811	AL549_RS18330
AL549_RS18335	PF13400	AL549_RS18335
AL549_RS18345	PF00263	AL549_RS18345
AL549_RS18345	PF13629	AL549_RS18345
AL549_RS18350	PF08666	SAF domain
AL549_RS18350	PF16976	AL549_RS18350
AL549_RS18360	PF01478	Type IV leader peptidase family
AL549_RS18375	PF12833	Helix-turn-helix domain
AL549_RS18380	PF00501	AMP-binding enzyme
AL549_RS18385	PF06568	AL549_RS18385
AL549_RS18390	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS18390	PF03466	LysR substrate binding domain
AL549_RS18395	PF00009	Elongation factor Tu GTP binding domain
AL549_RS18395	PF00679	Elongation factor G C-terminus
AL549_RS18395	PF03144	Elongation factor Tu domain 2
AL549_RS18395	PF03764	Elongation factor G, domain IV
AL549_RS18395	PF14492	Elongation Factor G, domain II
AL549_RS18400	PF12710	haloacid dehalogenase-like hydrolase
AL549_RS18410	PF00990	GGDEF domain
AL549_RS18410	PF07695	AL549_RS18410
AL549_RS18415	PF13481	AAA domain
AL549_RS18415	PF13541	Subunit ChlI of Mg-chelatase
AL549_RS18420	PF07238	PilZ domain
AL549_RS18425	PF00702	haloacid dehalogenase-like hydrolase
AL549_RS18430	PF10144	AL549_RS18430
AL549_RS18435	PF01048	Phosphorylase superfamily
AL549_RS18440	PF01676	Metalloenzyme superfamily
AL549_RS18445	PF00591	Glycosyl transferase family, a/b domain
AL549_RS18445	PF02885	Glycosyl transferase family, helical bundle domain
AL549_RS18445	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
AL549_RS18450	PF01791	DeoC/LacD family aldolase
AL549_RS18455	PF01773	Na+ dependent nucleoside transporter N-terminus
AL549_RS18455	PF07662	Na+ dependent nucleoside transporter C-terminus
AL549_RS18455	PF07670	Nucleoside recognition
AL549_RS18460	PF01026	TatD related DNase
AL549_RS18465	PF00009	Elongation factor Tu GTP binding domain
AL549_RS18465	PF03144	Elongation factor Tu domain 2
AL549_RS18465	PF16658	AL549_RS18465
AL549_RS18470	PF00990	GGDEF domain
AL549_RS18475	PF00563	EAL domain
AL549_RS18475	PF00990	GGDEF domain
AL549_RS18480	PF00583	Acetyltransferase (GNAT) family
AL549_RS18485	PF03603	DNA polymerase III psi subunit
AL549_RS18490	PF13527	Acetyltransferase (GNAT) domain
AL549_RS18495	PF02036	SCP-2 sterol transfer family
AL549_RS18500	PF00563	EAL domain
AL549_RS18500	PF00990	GGDEF domain
AL549_RS18500	PF08448	PAS fold
AL549_RS18500	PF13188	PAS domain
AL549_RS18505	PF01136	AL549_RS18505
AL549_RS18510	PF01136	AL549_RS18510
AL549_RS18515	PF01554	MatE
AL549_RS18520	PF01047	MarR family
AL549_RS18525	PF13176	Tetratricopeptide repeat
AL549_RS18530	PF00013	KH domain
AL549_RS18530	PF00575	S1 RNA binding domain
AL549_RS18530	PF01138	3' exoribonuclease family, domain 1
AL549_RS18530	PF03725	3' exoribonuclease family, domain 2
AL549_RS18530	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
AL549_RS18550	PF05488	PAAR motif
AL549_RS18555	PF00312	Ribosomal protein S15
AL549_RS18560	PF01509	TruB family pseudouridylate synthase (N terminal domain)
AL549_RS18560	PF09157	Pseudouridine synthase II TruB, C-terminal
AL549_RS18560	PF16198	AL549_RS18560
AL549_RS18565	PF02033	Ribosome-binding factor A
AL549_RS18570	PF00009	Elongation factor Tu GTP binding domain
AL549_RS18570	PF04760	Translation initiation factor IF-2, N-terminal region
AL549_RS18570	PF08364	AL549_RS18570
AL549_RS18570	PF11987	Translation-initiation factor 2
AL549_RS18575	PF08529	NusA N-terminal domain
AL549_RS18575	PF13184	NusA-like KH domain
AL549_RS18575	PF14520	Helix-hairpin-helix domain
AL549_RS18580	PF02576	Uncharacterised BCR, YhbC family COG0779
AL549_RS18580	PF17384	AL549_RS18580
AL549_RS18595	PF03840	Preprotein translocase SecG subunit
AL549_RS18600	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL549_RS18600	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL549_RS18600	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL549_RS18600	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL549_RS18605	PF00809	Pterin binding enzyme
AL549_RS18610	PF00004	ATPase family associated with various cellular activities (AAA)
AL549_RS18610	PF01434	Peptidase family M41
AL549_RS18610	PF06480	FtsH Extracellular
AL549_RS18615	PF01728	FtsJ-like methyltransferase
AL549_RS18620	PF01985	CRS1 / YhbY (CRM) domain
AL549_RS18625	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL549_RS18625	PF03449	Transcription elongation factor, N-terminal
AL549_RS18635	PF13609	Gram-negative porin
AL549_RS18640	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
AL549_RS18645	PF04304	AL549_RS18645
AL549_RS18650	PF00579	tRNA synthetases class I (W and Y)
AL549_RS18655	PF01551	Peptidase family M23
AL549_RS18655	PF04225	Opacity-associated protein A LysM-like domain
AL549_RS18655	PF08525	AL549_RS18655
AL549_RS18660	PF00873	AcrB/AcrD/AcrF family
AL549_RS18665	PF16576	AL549_RS18665
AL549_RS18670	PF01521	Iron-sulphur cluster biosynthesis
AL549_RS18675	PF00202	Aminotransferase class-III
AL549_RS18680	PF01594	AL549_RS18680
AL549_RS18685	PF05175	Methyltransferase small domain
AL549_RS18685	PF08468	Methyltransferase small domain N-terminal
AL549_RS18690	PF00072	Response regulator receiver domain
AL549_RS18690	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS18690	PF00672	HAMP domain
AL549_RS18690	PF00989	PAS fold
AL549_RS18690	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS18695	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_RS18700	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS18705	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS18710	PF00005	ABC transporter
AL549_RS18710	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_RS18715	PF00005	ABC transporter
AL549_RS18715	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_RS18720	PF00759	Glycosyl hydrolase family 9
AL549_RS18720	PF02927	N-terminal ig-like domain of cellulase
AL549_RS18725	PF01869	BadF/BadG/BcrA/BcrD ATPase family
AL549_RS18730	PF00728	Glycosyl hydrolase family 20, catalytic domain
AL549_RS18730	PF02838	Glycosyl hydrolase family 20, domain 2
AL549_RS18735	PF06165	Glycosyltransferase family 36
AL549_RS18735	PF17167	AL549_RS18735
AL549_RS18740	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL549_RS18740	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL549_RS18740	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL549_RS18740	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL549_RS18745	PF00005	ABC transporter
AL549_RS18745	PF08402	TOBE domain
AL549_RS18750	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS18755	PF13343	Bacterial extracellular solute-binding protein
AL549_RS18760	PF00909	Ammonium Transporter Family
AL549_RS18765	PF00543	Nitrogen regulatory protein P-II
AL549_RS18770	PF06062	AL549_RS18770
AL549_RS18775	PF05651	AL549_RS18775
AL549_RS18775	PF13556	PucR C-terminal helix-turn-helix domain
AL549_RS18780	PF02447	AL549_RS18780
AL549_RS18785	PF02595	Glycerate kinase family
AL549_RS18790	PF00330	Aconitase family (aconitate hydratase)
AL549_RS18790	PF06434	Aconitate hydratase 2 N-terminus
AL549_RS18790	PF11791	Aconitate B N-terminal domain
AL549_RS18795	PF01103	Surface antigen
AL549_RS18795	PF01734	Patatin-like phospholipase
AL549_RS18795	PF07244	Surface antigen variable number repeat
AL549_RS18800	PF00905	Penicillin binding protein transpeptidase domain
AL549_RS18800	PF00912	Transglycosylase
AL549_RS18800	PF14814	Bifunctional transglycosylase second domain
AL549_RS18805	PF00270	DEAD/DEAH box helicase
AL549_RS18805	PF00271	Helicase conserved C-terminal domain
AL549_RS18805	PF04408	Helicase associated domain (HA2)
AL549_RS18805	PF08482	AL549_RS18805
AL549_RS18810	PF03749	Sugar fermentation stimulation protein
AL549_RS18815	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AL549_RS18820	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL549_RS18825	PF01743	Poly A polymerase head domain
AL549_RS18825	PF12626	Polymerase A arginine-rich C-terminus
AL549_RS18825	PF12627	Probable RNA and SrmB- binding site of polymerase A
AL549_RS18830	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AL549_RS18835	PF02548	Ketopantoate hydroxymethyltransferase
AL549_RS18840	PF02569	Pantoate-beta-alanine ligase
AL549_RS18845	PF01061	AL549_RS18845
AL549_RS18850	PF00005	ABC transporter
AL549_RS18855	PF00916	AL549_RS18855
AL549_RS18855	PF01740	STAS domain
AL549_RS18860	PF00484	Carbonic anhydrase
AL549_RS18865	PF00156	Phosphoribosyl transferase domain
AL549_RS18870	PF00440	Bacterial regulatory proteins, tetR family
AL549_RS18875	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL549_RS18875	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_RS18880	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AL549_RS18880	PF00364	Biotin-requiring enzyme
AL549_RS18880	PF02817	e3 binding domain
AL549_RS18885	PF00456	Transketolase, thiamine diphosphate binding domain
AL549_RS18890	PF00392	Bacterial regulatory proteins, gntR family
AL549_RS18890	PF07729	FCD domain
AL549_RS18895	PF01510	N-acetylmuramoyl-L-alanine amidase
AL549_RS18900	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
AL549_RS18900	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
AL549_RS18905	PF00114	Pilin (bacterial filament)
AL549_RS18905	PF07963	Prokaryotic N-terminal methylation motif
AL549_RS18910	PF00437	Type II/IV secretion system protein
AL549_RS18910	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
AL549_RS18915	PF00482	Type II secretion system (T2SS), protein F
AL549_RS18920	PF01478	Type IV leader peptidase family
AL549_RS18920	PF06750	AL549_RS18920
AL549_RS18925	PF01121	Dephospho-CoA kinase
AL549_RS18930	PF07072	Protein of unknown function (DUF1342)
AL549_RS18935	PF03884	Domain of unknown function (DUF329)
AL549_RS18940	PF01245	Ribosomal protein L19
AL549_RS18945	PF01746	tRNA (Guanine-1)-methyltransferase
AL549_RS18950	PF01782	RimM N-terminal domain
AL549_RS18950	PF05239	PRC-barrel domain
AL549_RS18955	PF00886	Ribosomal protein S16
AL549_RS18960	PF00448	SRP54-type protein, GTPase domain
AL549_RS18960	PF02881	SRP54-type protein, helical bundle domain
AL549_RS18960	PF02978	Signal peptide binding domain
AL549_RS18965	PF01578	AL549_RS18965
AL549_RS18970	PF00571	CBS domain
AL549_RS18970	PF01595	AL549_RS18970
AL549_RS18970	PF03471	Transporter associated domain
AL549_RS18975	PF02664	S-Ribosylhomocysteinase (LuxS)
AL549_RS18985	PF04262	Glutamate-cysteine ligase
AL549_RS18990	PF00675	Insulinase (Peptidase family M16)
AL549_RS18990	PF05193	Peptidase M16 inactive domain
AL549_RS18995	PF09335	AL549_RS18995
AL549_RS19000	PF08240	Alcohol dehydrogenase GroES-like domain
AL549_RS19000	PF13602	Zinc-binding dehydrogenase
AL549_RS19005	PF03977	AL549_RS19005
AL549_RS19010	PF00364	Biotin-requiring enzyme
AL549_RS19010	PF00682	HMGL-like
AL549_RS19010	PF02436	Conserved carboxylase domain
AL549_RS19015	PF04277	AL549_RS19015
AL549_RS19060	PF02599	Global regulator protein family
AL549_RS19065	PF00696	Amino acid kinase family
AL549_RS19070	PF01411	tRNA synthetases class II (A)
AL549_RS19070	PF02272	DHHA1 domain
AL549_RS19070	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AL549_RS19075	PF02631	RecX family
AL549_RS19080	PF00154	recA bacterial DNA recombination protein
AL549_RS19085	PF02464	Competence-damaged protein
AL549_RS19090	PF00488	MutS domain V
AL549_RS19090	PF01624	MutS domain I
AL549_RS19090	PF05188	MutS domain II
AL549_RS19090	PF05190	MutS family domain IV
AL549_RS19090	PF05192	MutS domain III
AL549_RS19095	PF00140	Sigma-70 factor, region 1
AL549_RS19095	PF04539	Sigma-70 region 3
AL549_RS19095	PF04542	Sigma-70 region 2
AL549_RS19095	PF04545	Sigma-70, region 4
AL549_RS19100	PF01476	LysM domain
AL549_RS19100	PF01551	Peptidase family M23
AL549_RS19105	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
AL549_RS19110	PF01975	Survival protein SurE
AL549_RS19115	PF01142	tRNA pseudouridine synthase D (TruD)
AL549_RS19120	PF02542	YgbB family
AL549_RS19125	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
AL549_RS19130	PF04977	Septum formation initiator
AL549_RS19135	PF00113	Enolase, C-terminal TIM barrel domain
AL549_RS19135	PF03952	Enolase, N-terminal domain
AL549_RS19140	PF00117	Glutamine amidotransferase class-I
AL549_RS19140	PF06418	CTP synthase N-terminus
AL549_RS19145	PF03819	MazG nucleotide pyrophosphohydrolase domain
AL549_RS19150	PF02824	TGS domain
AL549_RS19150	PF04607	Region found in RelA / SpoT proteins
AL549_RS19150	PF13291	ACT domain
AL549_RS19150	PF13328	HD domain
AL549_RS19155	PF01938	TRAM domain
AL549_RS19155	PF05958	tRNA (Uracil-5-)-methyltransferase
AL549_RS19160	PF00072	Response regulator receiver domain
AL549_RS19160	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS19160	PF01627	Hpt domain
AL549_RS19160	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS19160	PF09984	AL549_RS19160
AL549_RS19165	PF00990	GGDEF domain
AL549_RS19180	PF01648	4'-phosphopantetheinyl transferase superfamily
AL549_RS19185	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
AL549_RS19190	PF02565	Recombination protein O C terminal
AL549_RS19190	PF11967	Recombination protein O N terminal
AL549_RS19195	PF01926	50S ribosome-binding GTPase
AL549_RS19195	PF07650	KH domain
AL549_RS19200	PF00035	Double-stranded RNA binding motif
AL549_RS19200	PF14622	Ribonuclease-III-like
AL549_RS19205	PF00717	Peptidase S24-like
AL549_RS19205	PF10502	Signal peptidase, peptidase S26
AL549_RS19210	PF00009	Elongation factor Tu GTP binding domain
AL549_RS19210	PF00679	Elongation factor G C-terminus
AL549_RS19210	PF03144	Elongation factor Tu domain 2
AL549_RS19210	PF06421	GTP-binding protein LepA C-terminus
AL549_RS19215	PF04246	AL549_RS19215
AL549_RS19220	PF03888	MucB/RseB family
AL549_RS19220	PF17188	AL549_RS19220
AL549_RS19225	PF03872	Anti sigma-E protein RseA, N-terminal domain
AL549_RS19225	PF03873	Anti sigma-E protein RseA, C-terminal domain
AL549_RS19230	PF04542	Sigma-70 region 2
AL549_RS19230	PF08281	Sigma-70, region 4
AL549_RS19235	PF00890	FAD binding domain
AL549_RS19235	PF02910	Fumarate reductase flavoprotein C-term
AL549_RS19245	PF03937	Flavinator of succinate dehydrogenase
AL549_RS19250	PF01571	Aminomethyltransferase folate-binding domain
AL549_RS19255	PF04073	Aminoacyl-tRNA editing domain
AL549_RS19260	PF06526	Protein of unknown function (DUF1107)
AL549_RS19265	PF01494	FAD binding domain
AL549_RS19270	PF01494	FAD binding domain
AL549_RS19275	PF03695	Uncharacterised protein family (UPF0149)
AL549_RS19280	PF05164	Cell division protein ZapA
AL549_RS19290	PF01812	5-formyltetrahydrofolate cyclo-ligase family
AL549_RS19295	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
AL549_RS19300	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL549_RS19300	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL549_RS19305	PF04402	Protein of unknown function (DUF541)
AL549_RS19310	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS19310	PF03466	LysR substrate binding domain
AL549_RS19315	PF01810	AL549_RS19315
AL549_RS19320	PF00924	Mechanosensitive ion channel
AL549_RS19320	PF05552	Conserved TM helix
AL549_RS19325	PF01116	Fructose-bisphosphate aldolase class-II
AL549_RS19330	PF00162	Phosphoglycerate kinase
AL549_RS19335	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL549_RS19335	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL549_RS19345	PF00456	Transketolase, thiamine diphosphate binding domain
AL549_RS19345	PF02779	Transketolase, pyrimidine binding domain
AL549_RS19345	PF02780	Transketolase, C-terminal domain
AL549_RS19350	PF00438	S-adenosylmethionine synthetase, N-terminal domain
AL549_RS19350	PF02772	S-adenosylmethionine synthetase, central domain
AL549_RS19350	PF02773	S-adenosylmethionine synthetase, C-terminal domain
AL549_RS19355	PF09955	AL549_RS19355
AL549_RS19360	PF10263	AL549_RS19360
AL549_RS19360	PF17283	AL549_RS19360
AL549_RS19365	PF04231	Endonuclease I
AL549_RS19375	PF04452	RNA methyltransferase
AL549_RS19380	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
AL549_RS19380	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
AL549_RS19385	PF02622	Uncharacterized ACR, COG1678
AL549_RS19390	PF03652	Uncharacterised protein family (UPF0081)
AL549_RS19395	PF00437	Type II/IV secretion system protein
AL549_RS19400	PF00437	Type II/IV secretion system protein
AL549_RS19405	PF01168	Alanine racemase, N-terminal domain
AL549_RS19410	PF03807	NADP oxidoreductase coenzyme F420-dependent
AL549_RS19410	PF14748	Pyrroline-5-carboxylate reductase dimerisation
AL549_RS19415	PF02325	AL549_RS19415
AL549_RS19420	PF02594	Uncharacterised ACR, YggU family COG1872
AL549_RS19425	PF14467	Domain of unknown function (DUF4426)
AL549_RS19430	PF01725	Ham1 family
AL549_RS19435	PF04055	Radical SAM superfamily
AL549_RS19435	PF06969	HemN C-terminal domain
AL549_RS19440	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL549_RS19445	PF04960	Glutaminase
AL549_RS19450	PF02390	Putative methyltransferase
AL549_RS19455	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL549_RS19455	PF10576	Iron-sulfur binding domain of endonuclease III
AL549_RS19455	PF14815	NUDIX domain
AL549_RS19460	PF04362	Bacterial Fe(2+) trafficking
AL549_RS19465	PF01464	Transglycosylase SLT domain
AL549_RS19465	PF11873	Domain of unknown function (DUF3393)
AL549_RS19485	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS19485	PF17200	AL549_RS19485
AL549_RS19530	PF00753	Metallo-beta-lactamase superfamily
AL549_RS19580	PF01966	HD domain
AL549_RS19580	PF11871	AL549_RS19580
AL549_RS19585	PF06983	3-demethylubiquinone-9 3-methyltransferase
AL549_RS19590	PF00356	Bacterial regulatory proteins, lacI family
AL549_RS19590	PF13377	Periplasmic binding protein-like domain
AL549_RS19595	PF04794	YdjC-like protein
AL549_RS19600	PF02056	Family 4 glycosyl hydrolase
AL549_RS19600	PF11975	Family 4 glycosyl hydrolase C-terminal domain
AL549_RS19605	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
AL549_RS19610	PF02378	Phosphotransferase system, EIIC
AL549_RS19615	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL549_RS19620	PF01522	Polysaccharide deacetylase
AL549_RS19630	PF06271	AL549_RS19630
AL549_RS19635	PF03739	AL549_RS19635
AL549_RS19640	PF03739	AL549_RS19640
AL549_RS19645	PF00883	Cytosol aminopeptidase family, catalytic domain
AL549_RS19645	PF02789	Cytosol aminopeptidase family, N-terminal domain
AL549_RS19650	PF04364	DNA polymerase III chi subunit, HolC
AL549_RS19655	PF00133	tRNA synthetases class I (I, L, M and V)
AL549_RS19655	PF08264	Anticodon-binding domain of tRNA
AL549_RS19655	PF10458	Valyl tRNA synthetase tRNA binding arm
AL549_RS19660	PF01435	Peptidase family M48
AL549_RS19665	PF05987	AL549_RS19665
AL549_RS19670	PF09834	AL549_RS19670
AL549_RS19675	PF13508	Acetyltransferase (GNAT) domain
AL549_RS19685	PF06877	Regulator of ribonuclease activity B
AL549_RS19690	PF02274	Amidinotransferase
AL549_RS19695	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AL549_RS19695	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AL549_RS19700	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AL549_RS19700	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AL549_RS19705	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
AL549_RS19705	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
AL549_RS19710	PF01042	Endoribonuclease L-PSP
AL549_RS19715	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL549_RS19715	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL549_RS19720	PF00849	RNA pseudouridylate synthase
AL549_RS19725	PF00176	SNF2 family N-terminal domain
AL549_RS19725	PF00271	Helicase conserved C-terminal domain
AL549_RS19725	PF12137	RNA polymerase recycling family C-terminal
AL549_RS19730	PF02562	PhoH-like protein
AL549_RS19730	PF13638	PIN domain
AL549_RS19735	PF01523	Putative modulator of DNA gyrase
AL549_RS19740	PF00795	Carbon-nitrogen hydrolase
AL549_RS19745	PF13116	AL549_RS19745
AL549_RS19745	PF13502	AL549_RS19745
AL549_RS19750	PF00575	S1 RNA binding domain
AL549_RS19750	PF10150	Ribonuclease E/G family
AL549_RS19755	PF02545	Maf-like protein
AL549_RS19760	PF04093	AL549_RS19760
AL549_RS19765	PF04085	rod shape-determining protein MreC
AL549_RS19770	PF06723	MreB/Mbl protein
AL549_RS19785	PF07963	Prokaryotic N-terminal methylation motif
AL549_RS19790	PF07963	Prokaryotic N-terminal methylation motif
AL549_RS19795	PF07963	Prokaryotic N-terminal methylation motif
AL549_RS19800	PF07963	Prokaryotic N-terminal methylation motif
AL549_RS19805	PF07963	Prokaryotic N-terminal methylation motif
AL549_RS19815	PF00482	Type II secretion system (T2SS), protein F
AL549_RS19820	PF00437	Type II/IV secretion system protein
AL549_RS19820	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
AL549_RS19825	PF14559	Tetratricopeptide repeat
AL549_RS19830	PF13401	AAA domain
AL549_RS19835	PF00263	AL549_RS19835
AL549_RS19835	PF07655	AL549_RS19835
AL549_RS19845	PF04612	Type II secretion system (T2SS), protein M
AL549_RS19855	PF00563	EAL domain
AL549_RS19855	PF00990	GGDEF domain
AL549_RS19855	PF17157	AL549_RS19855
AL549_RS19860	PF00436	Single-strand binding protein family
AL549_RS19865	PF00196	Bacterial regulatory proteins, luxR family
AL549_RS19870	PF00483	Nucleotidyl transferase
AL549_RS19875	PF00005	ABC transporter
AL549_RS19880	PF04932	AL549_RS19880
AL549_RS19880	PF11846	AL549_RS19880
AL549_RS19880	PF15864	AL549_RS19880
AL549_RS19885	PF00266	Aminotransferase class-V
AL549_RS19895	PF00696	Amino acid kinase family
AL549_RS19900	PF00809	Pterin binding enzyme
AL549_RS19900	PF02310	B12 binding domain
AL549_RS19900	PF02574	Homocysteine S-methyltransferase
AL549_RS19900	PF02607	B12 binding domain
AL549_RS19900	PF02965	Vitamin B12 dependent methionine synthase, activation domain
AL549_RS19905	PF00999	Sodium/hydrogen exchanger family
AL549_RS19910	PF00989	PAS fold
AL549_RS19910	PF00990	GGDEF domain
AL549_RS19915	PF08495	AL549_RS19915
AL549_RS19915	PF10442	AL549_RS19915
AL549_RS19975	PF01507	Phosphoadenosine phosphosulfate reductase family
AL549_RS19980	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL549_RS19980	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL549_RS19985	PF00175	Oxidoreductase NAD-binding domain
AL549_RS19985	PF00258	Flavodoxin
AL549_RS19985	PF00667	FAD binding domain
AL549_RS20000	PF09583	AL549_RS20000
AL549_RS20005	PF01207	Dihydrouridine synthase (Dus)
AL549_RS20010	PF01475	Ferric uptake regulator family
AL549_RS20015	PF13690	Chemotaxis phosphatase CheX
AL549_RS20020	PF00342	Phosphoglucose isomerase
AL549_RS20025	PF01894	Uncharacterised protein family UPF0047
AL549_RS20030	PF01103	Surface antigen
AL549_RS20035	PF00842	Alanine racemase, C-terminal domain
AL549_RS20035	PF01168	Alanine racemase, N-terminal domain
AL549_RS20040	PF00772	DnaB-like helicase N terminal domain
AL549_RS20040	PF03796	DnaB-like helicase C terminal domain
AL549_RS20045	PF04338	Protein of unknown function, DUF481
AL549_RS20050	PF01281	Ribosomal protein L9, N-terminal domain
AL549_RS20050	PF03948	Ribosomal protein L9, C-terminal domain
AL549_RS20055	PF01084	Ribosomal protein S18
AL549_RS20060	PF00436	Single-strand binding protein family
AL549_RS20065	PF01250	Ribosomal protein S6
AL549_RS20070	PF00834	Ribulose-phosphate 3 epimerase family
AL549_RS20075	PF02086	D12 class N6 adenine-specific DNA methyltransferase
AL549_RS20080	PF05036	Sporulation related domain
AL549_RS20080	PF13401	AAA domain
AL549_RS20085	PF01761	3-dehydroquinate synthase
AL549_RS20090	PF01202	Shikimate kinase
AL549_RS20095	PF00263	AL549_RS20095
AL549_RS20095	PF03958	Bacterial type II/III secretion system short domain
AL549_RS20095	PF07660	Secretin and TonB N terminus short domain
AL549_RS20100	PF04351	Pilus assembly protein, PilP
AL549_RS20105	PF04350	Pilus assembly protein, PilO
AL549_RS20110	PF05137	AL549_RS20110
AL549_RS20115	PF11104	Type IV pilus assembly protein PilM;
AL549_RS20120	PF00905	Penicillin binding protein transpeptidase domain
AL549_RS20120	PF00912	Transglycosylase
AL549_RS20120	PF17092	AL549_RS20120
AL549_RS20125	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS20125	PF03466	LysR substrate binding domain
AL549_RS20130	PF12292	AL549_RS20130
AL549_RS20135	PF00206	Lyase
AL549_RS20135	PF00583	Acetyltransferase (GNAT) family
AL549_RS20135	PF14698	Argininosuccinate lyase C-terminal
AL549_RS20140	PF00764	Arginosuccinate synthase
AL549_RS20145	PF00696	Amino acid kinase family
AL549_RS20150	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL549_RS20150	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL549_RS20155	PF01546	Peptidase family M20/M25/M40
AL549_RS20155	PF07687	Peptidase dimerisation domain
AL549_RS20160	PF00311	Phosphoenolpyruvate carboxylase
AL549_RS20165	PF03551	Transcriptional regulator PadR-like family
AL549_RS20165	PF10400	Virulence activator alpha C-term
AL549_RS20170	PF02219	Methylenetetrahydrofolate reductase
AL549_RS20175	PF00696	Amino acid kinase family
AL549_RS20175	PF00742	Homoserine dehydrogenase
AL549_RS20175	PF03447	Homoserine dehydrogenase, NAD binding domain
AL549_RS20180	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL549_RS20185	PF01340	Met Apo-repressor, MetJ
AL549_RS20190	PF00390	Malic enzyme, N-terminal domain
AL549_RS20190	PF03949	Malic enzyme, NAD binding domain
AL549_RS20195	PF01197	Ribosomal protein L31
AL549_RS20200	PF00270	DEAD/DEAH box helicase
AL549_RS20200	PF00271	Helicase conserved C-terminal domain
AL549_RS20205	PF00356	Bacterial regulatory proteins, lacI family
AL549_RS20205	PF13377	Periplasmic binding protein-like domain
AL549_RS20210	PF05036	Sporulation related domain
AL549_RS20215	PF00227	Proteasome subunit
AL549_RS20220	PF00004	ATPase family associated with various cellular activities (AAA)
AL549_RS20220	PF07724	AAA domain (Cdc48 subfamily)
AL549_RS20220	PF10431	C-terminal, D2-small domain, of ClpB protein
AL549_RS20225	PF01040	UbiA prenyltransferase family
AL549_RS20230	PF03737	Demethylmenaquinone methyltransferase
AL549_RS20235	PF06005	Protein of unknown function (DUF904)
AL549_RS20240	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
AL549_RS20245	PF13412	Winged helix-turn-helix DNA-binding
AL549_RS20250	PF11333	AL549_RS20250
AL549_RS20255	PF05656	AL549_RS20255
AL549_RS20260	PF02962	5-carboxymethyl-2-hydroxymuconate isomerase
AL549_RS20265	PF00121	Triosephosphate isomerase
AL549_RS20270	PF16363	AL549_RS20270
AL549_RS20275	PF00210	Ferritin-like domain
AL549_RS20280	PF04324	BFD-like [2Fe-2S] binding domain
AL549_RS20285	PF00009	Elongation factor Tu GTP binding domain
AL549_RS20285	PF03143	Elongation factor Tu C-terminal domain
AL549_RS20285	PF03144	Elongation factor Tu domain 2
AL549_RS20290	PF00009	Elongation factor Tu GTP binding domain
AL549_RS20290	PF00679	Elongation factor G C-terminus
AL549_RS20290	PF03144	Elongation factor Tu domain 2
AL549_RS20290	PF03764	Elongation factor G, domain IV
AL549_RS20290	PF14492	Elongation Factor G, domain II
AL549_RS20295	PF00177	Ribosomal protein S7p/S5e
AL549_RS20300	PF00164	Ribosomal protein S12/S23
AL549_RS20305	PF04077	DsrH like protein
AL549_RS20310	PF02635	DsrE/DsrF-like family
AL549_RS20315	PF02635	DsrE/DsrF-like family
AL549_RS20320	PF08348	AL549_RS20320
AL549_RS20320	PF13309	AL549_RS20320
AL549_RS20325	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL549_RS20325	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL549_RS20330	PF13360	PQQ-like domain
AL549_RS20335	PF04102	SlyX
AL549_RS20340	PF01112	Asparaginase
AL549_RS20345	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL549_RS20350	PF09526	AL549_RS20350
AL549_RS20360	PF02525	Flavodoxin-like fold
AL549_RS20365	PF00005	ABC transporter
AL549_RS20365	PF12848	ABC transporter
AL549_RS20370	PF09523	AL549_RS20370
AL549_RS20375	PF00561	alpha/beta hydrolase fold
AL549_RS20380	PF06794	Uncharacterised protein family (UPF0270)
AL549_RS20385	PF00485	Phosphoribulokinase / Uridine kinase family
AL549_RS20390	PF00027	Cyclic nucleotide-binding domain
AL549_RS20390	PF00325	Bacterial regulatory proteins, crp family
AL549_RS20395	PF07063	Domain of unknown function (DUF1338)
AL549_RS20400	PF00171	Aldehyde dehydrogenase family
AL549_RS20405	PF04958	Arginine N-succinyltransferase beta subunit
AL549_RS20410	PF00202	Aminotransferase class-III
AL549_RS20415	PF00117	Glutamine amidotransferase class-I
AL549_RS20420	PF03372	Endonuclease/Exonuclease/phosphatase family
AL549_RS20430	PF00579	tRNA synthetases class I (W and Y)
AL549_RS20435	PF13419	Haloacid dehalogenase-like hydrolase
AL549_RS20440	PF00588	SpoU rRNA Methylase family
AL549_RS20440	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AL549_RS20445	PF00575	S1 RNA binding domain
AL549_RS20445	PF00773	RNB domain
AL549_RS20445	PF08206	Ribonuclease B OB domain
AL549_RS20445	PF08461	Ribonuclease R winged-helix domain
AL549_RS20450	PF01979	Amidohydrolase family
AL549_RS20455	PF02082	Transcriptional regulator
AL549_RS20460	PF00042	Globin
AL549_RS20460	PF00175	Oxidoreductase NAD-binding domain
AL549_RS20460	PF00970	Oxidoreductase FAD-binding domain
AL549_RS20465	PF08238	Sel1 repeat
AL549_RS20470	PF00709	Adenylosuccinate synthetase
AL549_RS20475	PF09838	AL549_RS20475
AL549_RS20480	PF01145	SPFH domain / Band 7 family
AL549_RS20485	PF01145	SPFH domain / Band 7 family
AL549_RS20485	PF12221	AL549_RS20485
AL549_RS20490	PF01926	50S ribosome-binding GTPase
AL549_RS20490	PF13167	AL549_RS20490
AL549_RS20490	PF16360	AL549_RS20490
AL549_RS20495	PF17209	AL549_RS20495
AL549_RS20500	PF01715	IPP transferase
AL549_RS20505	PF01119	DNA mismatch repair protein, C-terminal domain
AL549_RS20505	PF08676	MutL C terminal dimerisation domain
AL549_RS20505	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS20510	PF01476	LysM domain
AL549_RS20510	PF01520	N-acetylmuramoyl-L-alanine amidase
AL549_RS20510	PF11741	AMIN domain
AL549_RS20515	PF02367	Uncharacterised P-loop hydrolase UPF0079
AL549_RS20520	PF08331	AL549_RS20520
AL549_RS20520	PF13484	AL549_RS20520
AL549_RS20580	PF00929	Exonuclease
AL549_RS20585	PF03193	Protein of unknown function, DUF258
AL549_RS20590	PF02666	AL549_RS20590
AL549_RS20595	PF00939	Sodium:sulfate symporter transmembrane region
AL549_RS20600	PF00892	EamA-like transporter family
AL549_RS20605	PF01676	Metalloenzyme superfamily
AL549_RS20605	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
AL549_RS20615	PF00581	Rhodanese-like domain
AL549_RS20620	PF02556	Preprotein translocase subunit SecB
AL549_RS20625	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
AL549_RS20625	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
AL549_RS20630	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_RS20630	PF06426	Serine acetyltransferase, N-terminal
AL549_RS20635	PF01551	Peptidase family M23
AL549_RS20645	PF00440	Bacterial regulatory proteins, tetR family
AL549_RS20645	PF13972	Bacterial transcriptional repressor
AL549_RS20650	PF04892	AL549_RS20650
AL549_RS20655	PF00152	tRNA synthetases class II (D, K and N)
AL549_RS20660	PF00890	FAD binding domain
AL549_RS20660	PF02910	Fumarate reductase flavoprotein C-term
AL549_RS20665	PF13085	2Fe-2S iron-sulfur cluster binding domain
AL549_RS20665	PF13183	4Fe-4S dicluster domain
AL549_RS20670	PF02300	Fumarate reductase subunit C
AL549_RS20675	PF02313	Fumarate reductase subunit D
AL549_RS20680	PF01145	SPFH domain / Band 7 family
AL549_RS20685	PF01132	Elongation factor P (EF-P) OB domain
AL549_RS20685	PF08207	Elongation factor P (EF-P) KOW-like domain
AL549_RS20685	PF09285	Elongation factor P, C-terminal
AL549_RS20690	PF04055	Radical SAM superfamily
AL549_RS20690	PF13353	4Fe-4S single cluster domain
AL549_RS20695	PF02308	AL549_RS20695
AL549_RS20705	PF00118	TCP-1/cpn60 chaperonin family
AL549_RS20710	PF00166	Chaperonin 10 Kd subunit
AL549_RS20715	PF01554	MatE
AL549_RS20720	PF00365	Phosphofructokinase
AL549_RS20725	PF01545	Cation efflux family
AL549_RS20725	PF16916	AL549_RS20725
AL549_RS20730	PF07813	LTXXQ motif family protein
AL549_RS20735	PF00072	Response regulator receiver domain
AL549_RS20735	PF00486	Transcriptional regulatory protein, C terminal
AL549_RS20740	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS20740	PF00672	HAMP domain
AL549_RS20740	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS20740	PF16527	AL549_RS20740
AL549_RS20745	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AL549_RS20745	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AL549_RS20750	PF00588	SpoU rRNA Methylase family
AL549_RS20755	PF04186	AL549_RS20755
AL549_RS20760	PF00206	Lyase
AL549_RS20760	PF10415	Fumarase C C-terminus
AL549_RS20765	PF03605	AL549_RS20765
AL549_RS20770	PF02683	AL549_RS20770
AL549_RS20770	PF11412	Disulphide bond corrector protein DsbC
AL549_RS20770	PF13899	Thioredoxin-like
AL549_RS20780	PF01914	AL549_RS20780
AL549_RS20785	PF13937	AL549_RS20785
AL549_RS20790	PF00474	Sodium:solute symporter family
AL549_RS20810	PF00072	Response regulator receiver domain
AL549_RS20810	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS20810	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS20810	PF12860	AL549_RS20810
AL549_RS20815	PF12832	MFS_1 like family
AL549_RS20820	PF00027	Cyclic nucleotide-binding domain
AL549_RS20820	PF03445	AL549_RS20820
AL549_RS20820	PF10335	AL549_RS20820
AL549_RS20825	PF00929	Exonuclease
AL549_RS20830	PF00501	AMP-binding enzyme
AL549_RS20830	PF13193	AMP-binding enzyme C-terminal domain
AL549_RS20830	PF16177	AL549_RS20830
AL549_RS20835	PF01220	Dehydroquinase class II
AL549_RS20840	PF00364	Biotin-requiring enzyme
AL549_RS20845	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
AL549_RS20845	PF02785	Biotin carboxylase C-terminal domain
AL549_RS20845	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL549_RS20850	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
AL549_RS20855	PF01207	Dihydrouridine synthase (Dus)
AL549_RS20860	PF02954	Bacterial regulatory protein, Fis family
AL549_RS20865	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS20865	PF00672	HAMP domain
AL549_RS20865	PF17200	AL549_RS20865
AL549_RS20870	PF00376	MerR family regulatory protein
AL549_RS20870	PF09278	MerR, DNA binding
AL549_RS20880	PF01808	AICARFT/IMPCHase bienzyme
AL549_RS20880	PF02142	MGS-like domain
AL549_RS20885	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
AL549_RS20885	PF02843	Phosphoribosylglycinamide synthetase, C domain
AL549_RS20885	PF02844	Phosphoribosylglycinamide synthetase, N domain
AL549_RS20890	PF07356	AL549_RS20890
AL549_RS20895	PF00216	Bacterial DNA-binding protein
AL549_RS20900	PF00571	CBS domain
AL549_RS20900	PF01595	AL549_RS20900
AL549_RS20905	PF04222	Protein of unknown function (DUF416)
AL549_RS20910	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL549_RS20915	PF03167	Uracil DNA glycosylase superfamily
AL549_RS20920	PF01208	Uroporphyrinogen decarboxylase (URO-D)
AL549_RS20935	PF00293	NUDIX domain
AL549_RS20935	PF09297	NADH pyrophosphatase zinc ribbon domain
AL549_RS20940	PF04353	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
AL549_RS20945	PF00623	RNA polymerase Rpb1, domain 2
AL549_RS20945	PF04983	RNA polymerase Rpb1, domain 3
AL549_RS20945	PF04997	RNA polymerase Rpb1, domain 1
AL549_RS20945	PF04998	RNA polymerase Rpb1, domain 5
AL549_RS20945	PF05000	RNA polymerase Rpb1, domain 4
AL549_RS20950	PF00562	RNA polymerase Rpb2, domain 6
AL549_RS20950	PF04560	RNA polymerase Rpb2, domain 7
AL549_RS20950	PF04561	RNA polymerase Rpb2, domain 2
AL549_RS20950	PF04563	RNA polymerase beta subunit
AL549_RS20950	PF04565	RNA polymerase Rpb2, domain 3
AL549_RS20950	PF10385	RNA polymerase beta subunit external 1 domain
AL549_RS20955	PF00542	Ribosomal protein L7/L12 C-terminal domain
AL549_RS20955	PF16320	AL549_RS20955
AL549_RS20960	PF00466	Ribosomal protein L10
AL549_RS20965	PF00687	Ribosomal protein L1p/L10e family
AL549_RS20970	PF00298	Ribosomal protein L11, RNA binding domain
AL549_RS20970	PF03946	Ribosomal protein L11, N-terminal domain
AL549_RS20975	PF00467	KOW motif
AL549_RS20975	PF02357	Transcription termination factor nusG
AL549_RS20980	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
AL549_RS20985	PF00009	Elongation factor Tu GTP binding domain
AL549_RS20985	PF03143	Elongation factor Tu C-terminal domain
AL549_RS20985	PF03144	Elongation factor Tu domain 2
AL549_RS21010	PF00485	Phosphoribulokinase / Uridine kinase family
AL549_RS21015	PF02237	Biotin protein ligase C terminal domain
AL549_RS21015	PF03099	Biotin/lipoate A/B protein ligase family
AL549_RS21015	PF08279	HTH domain
AL549_RS21020	PF01565	FAD binding domain
AL549_RS21020	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
AL549_RS21025	PF13673	Acetyltransferase (GNAT) domain
AL549_RS21030	PF13091	PLD-like domain
AL549_RS21090	PF00076	RNA recognition motif
AL549_RS21095	PF01177	Asp/Glu/Hydantoin racemase
AL549_RS21100	PF01902	ATP-binding region
AL549_RS21105	PF00593	TonB dependent receptor
AL549_RS21105	PF07715	TonB-dependent Receptor Plug Domain
AL549_RS21110	PF05958	tRNA (Uracil-5-)-methyltransferase
AL549_RS21115	PF07226	AL549_RS21115
AL549_RS21120	PF00440	Bacterial regulatory proteins, tetR family
AL549_RS21125	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL549_RS21125	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_RS21130	PF04072	Leucine carboxyl methyltransferase
AL549_RS21135	PF00717	Peptidase S24-like
AL549_RS21135	PF01726	LexA DNA binding domain
AL549_RS21145	PF01553	Acyltransferase
AL549_RS21155	PF01040	UbiA prenyltransferase family
AL549_RS21160	PF04345	Chorismate lyase
AL549_RS21165	PF03748	AL549_RS21165
AL549_RS21170	PF01694	Rhomboid family
AL549_RS21170	PF12122	Protein of unknown function (DUF3582)
AL549_RS21175	PF00581	Rhodanese-like domain
AL549_RS21180	PF00140	Sigma-70 factor, region 1
AL549_RS21180	PF04542	Sigma-70 region 2
AL549_RS21180	PF04545	Sigma-70, region 4
AL549_RS21190	PF00005	ABC transporter
AL549_RS21195	PF00448	SRP54-type protein, GTPase domain
AL549_RS21195	PF02881	SRP54-type protein, helical bundle domain
AL549_RS21200	PF03602	Conserved hypothetical protein 95
AL549_RS21205	PF06611	AL549_RS21205
AL549_RS21210	PF01914	AL549_RS21210
AL549_RS21215	PF10678	AL549_RS21215
AL549_RS21220	PF07947	AL549_RS21220
AL549_RS21235	PF10694	Protein of unknown function (DUF2500)
AL549_RS21240	PF01757	AL549_RS21240
AL549_RS21245	PF07690	Major Facilitator Superfamily
AL549_RS21250	PF05706	Cyclin-dependent kinase inhibitor 3 (CDKN3)
AL549_RS21255	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL549_RS21255	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL549_RS21260	PF01022	Bacterial regulatory protein, arsR family
AL549_RS21265	PF00563	EAL domain
AL549_RS21265	PF08668	HDOD domain
AL549_RS21270	PF01810	AL549_RS21270
AL549_RS21275	PF12146	Putative lysophospholipase
AL549_RS21280	PF08282	haloacid dehalogenase-like hydrolase
AL549_RS21285	PF01878	EVE domain
AL549_RS21295	PF03942	AL549_RS21295
AL549_RS21300	PF00563	EAL domain
AL549_RS21300	PF00990	GGDEF domain
AL549_RS21300	PF08495	AL549_RS21300
AL549_RS21300	PF10442	AL549_RS21300
AL549_RS21305	PF00702	haloacid dehalogenase-like hydrolase
AL549_RS21310	PF00589	Phage integrase family
AL549_RS21310	PF02899	Phage integrase, N-terminal SAM-like domain
AL549_RS21315	PF04340	Protein of unknown function, DUF484
AL549_RS21320	PF01678	Diaminopimelate epimerase
AL549_RS21325	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AL549_RS21325	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL549_RS21330	PF13627	AL549_RS21330
AL549_RS21335	PF01491	Frataxin-like domain
AL549_RS21340	PF01295	AL549_RS21340
AL549_RS21340	PF12633	AL549_RS21340
AL549_RS21345	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
AL549_RS21345	PF03900	Porphobilinogen deaminase, C-terminal domain
AL549_RS21350	PF02602	Uroporphyrinogen-III synthase HemD
AL549_RS21355	PF04375	AL549_RS21355
AL549_RS21360	PF07219	AL549_RS21360
AL549_RS21365	PF03486	HI0933-like protein
AL549_RS21370	PF10625	AL549_RS21370
AL549_RS21375	PF00210	Ferritin-like domain
AL549_RS21380	PF00582	Universal stress protein family
AL549_RS21385	PF00892	EamA-like transporter family
AL549_RS21395	PF04445	Putative SAM-dependent methyltransferase
AL549_RS21400	PF00563	EAL domain
AL549_RS21400	PF00990	GGDEF domain
AL549_RS21400	PF13426	PAS domain
AL549_RS21405	PF01037	AsnC family
AL549_RS21405	PF13404	AsnC-type helix-turn-helix domain
AL549_RS21410	PF01432	Peptidase family M3
AL549_RS21415	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
AL549_RS21420	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL549_RS21420	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_RS21440	PF01081	KDPG and KHG aldolase
AL549_RS21445	PF02447	AL549_RS21445
AL549_RS21450	PF01202	Shikimate kinase
AL549_RS21455	PF00920	Dehydratase family
AL549_RS21460	PF00356	Bacterial regulatory proteins, lacI family
AL549_RS21460	PF13377	Periplasmic binding protein-like domain
AL549_RS21465	PF00072	Response regulator receiver domain
AL549_RS21475	PF00069	Protein kinase domain
AL549_RS21485	PF07638	ECF sigma factor
AL549_RS21505	PF05036	Sporulation related domain
AL549_RS21510	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS21510	PF12911	AL549_RS21510
AL549_RS21515	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS21520	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_RS21525	PF00005	ABC transporter
AL549_RS21525	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_RS21555	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL549_RS21560	PF00580	UvrD/REP helicase N-terminal domain
AL549_RS21560	PF13361	UvrD-like helicase C-terminal domain
AL549_RS21565	PF00440	Bacterial regulatory proteins, tetR family
AL549_RS21570	PF16576	AL549_RS21570
AL549_RS21575	PF00873	AcrB/AcrD/AcrF family
AL549_RS21580	PF04380	AL549_RS21580
AL549_RS21585	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
AL549_RS21585	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
AL549_RS21590	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS21590	PF03466	LysR substrate binding domain
AL549_RS21630	PF12724	Flavodoxin domain
AL549_RS21635	PF02386	Cation transport protein
AL549_RS21640	PF01205	Uncharacterized protein family UPF0029
AL549_RS21640	PF09186	Domain of unknown function (DUF1949)
AL549_RS21645	PF00378	Enoyl-CoA hydratase/isomerase family
AL549_RS21645	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL549_RS21645	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL549_RS21650	PF00108	Thiolase, N-terminal domain
AL549_RS21650	PF02803	Thiolase, C-terminal domain
AL549_RS21655	PF00107	Zinc-binding dehydrogenase
AL549_RS21660	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS21660	PF03466	LysR substrate binding domain
AL549_RS21670	PF01206	Sulfurtransferase TusA
AL549_RS21680	PF01169	AL549_RS21680
AL549_RS21685	PF02091	Glycyl-tRNA synthetase alpha subunit
AL549_RS21690	PF02092	AL549_RS21690
AL549_RS21690	PF05746	DALR anticodon binding domain
AL549_RS21700	PF00155	Aminotransferase class I and II
AL549_RS21705	PF00563	EAL domain
AL549_RS21705	PF00990	GGDEF domain
AL549_RS21705	PF03924	CHASE domain
AL549_RS21710	PF00011	Hsp20/alpha crystallin family
AL549_RS21715	PF00204	DNA gyrase B
AL549_RS21715	PF00986	DNA gyrase B subunit, carboxyl terminus
AL549_RS21715	PF01751	Toprim domain
AL549_RS21715	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS21720	PF02463	RecF/RecN/SMC N terminal domain
AL549_RS21725	PF00712	DNA polymerase III beta subunit, N-terminal domain
AL549_RS21725	PF02767	DNA polymerase III beta subunit, central domain
AL549_RS21725	PF02768	DNA polymerase III beta subunit, C-terminal domain
AL549_RS21730	PF00308	Bacterial dnaA  protein
AL549_RS21730	PF08299	Bacterial dnaA protein helix-turn-helix
AL549_RS21730	PF11638	DnaA N-terminal domain
AL549_RS21735	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS21740	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS21745	PF00005	ABC transporter
AL549_RS21750	PF00468	Ribosomal protein L34
AL549_RS21755	PF00825	Ribonuclease P
AL549_RS21760	PF01809	AL549_RS21760
AL549_RS21765	PF02096	60Kd inner membrane protein
AL549_RS21765	PF14849	YidC periplasmic domain
AL549_RS21770	PF01926	50S ribosome-binding GTPase
AL549_RS21770	PF10396	GTP-binding protein TrmE N-terminus
AL549_RS21770	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
AL549_RS21775	PF00258	Flavodoxin
AL549_RS21785	PF01134	Glucose inhibited division protein A
AL549_RS21785	PF13932	GidA associated domain 3
AL549_RS21790	PF02527	rRNA small subunit methyltransferase G
AL549_RS21795	PF13614	AAA domain
AL549_RS21800	PF02195	ParB-like nuclease domain
AL549_RS21805	PF03899	AL549_RS21805
AL549_RS21810	PF00119	ATP synthase A chain
AL549_RS21815	PF00137	ATP synthase subunit C
AL549_RS21820	PF00430	ATP synthase B/B' CF(0)
AL549_RS21825	PF00213	ATP synthase delta (OSCP) subunit
AL549_RS21830	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL549_RS21830	PF00306	ATP synthase alpha/beta chain, C terminal domain
AL549_RS21830	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AL549_RS21835	PF00231	ATP synthase
AL549_RS21840	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL549_RS21840	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AL549_RS21845	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
AL549_RS21845	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
AL549_RS21850	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_RS21850	PF12804	MobA-like NTP transferase domain
AL549_RS21855	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS21860	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_RS21865	PF07690	Major Facilitator Superfamily
AL549_RS21870	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS21870	PF03466	LysR substrate binding domain
AL549_RS21875	PF00291	Pyridoxal-phosphate dependent enzyme
AL549_RS21875	PF00585	C-terminal regulatory domain of Threonine dehydratase
AL549_RS21880	PF00920	Dehydratase family
AL549_RS21885	PF01063	Aminotransferase class IV
AL549_RS21890	PF13710	ACT domain
AL549_RS21895	PF00205	Thiamine pyrophosphate enzyme, central domain
AL549_RS21895	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL549_RS21895	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL549_RS21900	PF01078	Magnesium chelatase, subunit ChlI
AL549_RS21900	PF13335	AL549_RS21900
AL549_RS21900	PF13541	Subunit ChlI of Mg-chelatase
AL549_RS21905	PF11059	AL549_RS21905
AL549_RS21910	PF01553	Acyltransferase
AL549_RS21915	PF01323	DSBA-like thioredoxin domain
AL549_RS21920	PF01636	Phosphotransferase enzyme family
AL549_RS21925	PF11614	IG-like fold at C-terminal of FixG, putative oxidoreductase
AL549_RS21925	PF12801	AL549_RS21925
AL549_RS21925	PF13746	4Fe-4S dicluster domain
AL549_RS21930	PF06288	Protein of unknown function (DUF1040)
AL549_RS21935	PF07070	AL549_RS21935
AL549_RS21940	PF03006	AL549_RS21940
AL549_RS21945	PF02386	Cation transport protein
AL549_RS21950	PF02080	TrkA-C domain
AL549_RS21950	PF02254	TrkA-N domain
AL549_RS21955	PF01029	NusB family
AL549_RS21955	PF01189	NOL1/NOP2/sun family
AL549_RS21960	PF00551	Formyl transferase
AL549_RS21960	PF02911	Formyl transferase, C-terminal domain
AL549_RS21965	PF01327	Polypeptide deformylase
AL549_RS21970	PF01476	LysM domain
AL549_RS21975	PF02481	DNA recombination-mediator protein A
AL549_RS21980	PF04361	AL549_RS21980
AL549_RS21985	PF01396	AL549_RS21985
AL549_RS21990	PF02222	ATP-grasp domain
AL549_RS21995	PF00731	AIR carboxylase
AL549_RS22000	PF01300	Telomere recombination
AL549_RS22005	PF01218	Coproporphyrinogen III oxidase
AL549_RS22010	PF01488	Shikimate / quinate 5-dehydrogenase
AL549_RS22010	PF08501	Shikimate dehydrogenase substrate binding domain
AL549_RS22015	PF07369	Protein of unknown function (DUF1488)
AL549_RS22020	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_RS22065	PF00394	Multicopper oxidase
AL549_RS22065	PF07731	Multicopper oxidase
AL549_RS22065	PF07732	Multicopper oxidase
AL549_RS22065	PF10518	TAT (twin-arginine translocation) pathway signal sequence
AL549_RS22070	PF02537	AL549_RS22070
AL549_RS22075	PF01964	ThiC family
AL549_RS22075	PF13667	ThiC-associated domain
AL549_RS22080	PF02581	Thiamine monophosphate synthase/TENI
AL549_RS22085	PF00899	ThiF family
AL549_RS22090	PF02597	ThiS family
AL549_RS22095	PF05690	Thiazole biosynthesis protein ThiG
AL549_RS22100	PF04055	Radical SAM superfamily
AL549_RS22100	PF06968	Biotin and Thiamin Synthesis associated domain
AL549_RS22105	PF00557	Metallopeptidase family M24
AL549_RS22105	PF01321	Creatinase/Prolidase N-terminal domain
AL549_RS22105	PF16188	AL549_RS22105
AL549_RS22105	PF16189	AL549_RS22105
AL549_RS22110	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS22110	PF03466	LysR substrate binding domain
AL549_RS22115	PF07690	Major Facilitator Superfamily
AL549_RS22125	PF07681	AL549_RS22125
AL549_RS22130	PF09836	Uncharacterized protein conserved in bacteria (DUF2063)
AL549_RS22135	PF05114	Protein of unknown function (DUF692)
AL549_RS22140	PF10048	AL549_RS22140
AL549_RS22145	PF00580	UvrD/REP helicase N-terminal domain
AL549_RS22145	PF13361	UvrD-like helicase C-terminal domain
AL549_RS22155	PF01810	AL549_RS22155
AL549_RS22160	PF02311	AraC-like ligand binding domain
AL549_RS22160	PF12833	Helix-turn-helix domain
AL549_RS22165	PF00892	EamA-like transporter family
AL549_RS22170	PF00270	DEAD/DEAH box helicase
AL549_RS22170	PF00271	Helicase conserved C-terminal domain
AL549_RS22170	PF00570	HRDC domain
AL549_RS22170	PF09382	RQC domain
AL549_RS22170	PF16124	AL549_RS22170
AL549_RS22175	PF12305	AL549_RS22175
AL549_RS22185	PF02592	AL549_RS22185
AL549_RS22190	PF02541	Ppx/GppA phosphatase family
AL549_RS22195	PF00270	DEAD/DEAH box helicase
AL549_RS22195	PF00271	Helicase conserved C-terminal domain
AL549_RS22200	PF00085	Thioredoxin
AL549_RS22205	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL549_RS22205	PF07497	Rho termination factor, RNA-binding domain
AL549_RS22205	PF07498	Rho termination factor, N-terminal domain
AL549_RS22215	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
AL549_RS22220	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL549_RS22225	PF00175	Oxidoreductase NAD-binding domain
AL549_RS22305	PF08668	HDOD domain
AL549_RS22310	PF00892	EamA-like transporter family
AL549_RS22315	PF02646	AL549_RS22315
AL549_RS22320	PF01209	ubiE/COQ5 methyltransferase family
AL549_RS22325	PF02036	SCP-2 sterol transfer family
AL549_RS22330	PF03109	AL549_RS22330
AL549_RS22335	PF02416	mttA/Hcf106 family
AL549_RS22340	PF02416	mttA/Hcf106 family
AL549_RS22345	PF00902	Sec-independent protein translocase protein (TatC)
AL549_RS22350	PF01026	TatD related DNase
AL549_RS22355	PF00490	Delta-aminolevulinic acid dehydratase
AL549_RS22360	PF00476	DNA polymerase family A
AL549_RS22360	PF01367	5'-3' exonuclease, C-terminal SAM fold
AL549_RS22360	PF01612	3'-5' exonuclease
AL549_RS22360	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AL549_RS22365	PF01926	50S ribosome-binding GTPase
AL549_RS22370	PF00034	Cytochrome c
AL549_RS22375	PF13489	Methyltransferase domain
AL549_RS22380	PF04220	AL549_RS22380
AL549_RS22385	PF10675	AL549_RS22385
AL549_RS22390	PF04055	Radical SAM superfamily
AL549_RS22390	PF06969	HemN C-terminal domain
AL549_RS22395	PF00563	EAL domain
AL549_RS22395	PF00990	GGDEF domain
AL549_RS22395	PF02743	Cache domain
AL549_RS22400	PF00072	Response regulator receiver domain
AL549_RS22400	PF00158	Sigma-54 interaction domain
AL549_RS22400	PF02954	Bacterial regulatory protein, Fis family
AL549_RS22405	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS22405	PF00989	PAS fold
AL549_RS22405	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS22410	PF13511	AL549_RS22410
AL549_RS22415	PF00120	Glutamine synthetase, catalytic domain
AL549_RS22415	PF03951	Glutamine synthetase, beta-Grasp domain
AL549_RS22425	PF00009	Elongation factor Tu GTP binding domain
AL549_RS22425	PF00679	Elongation factor G C-terminus
AL549_RS22425	PF03144	Elongation factor Tu domain 2
AL549_RS22430	PF13521	AAA domain
AL549_RS22435	PF11172	AL549_RS22435
AL549_RS22440	PF03631	AL549_RS22440
AL549_RS22445	PF02580	D-Tyr-tRNA(Tyr) deacylase
AL549_RS22450	PF00583	Acetyltransferase (GNAT) family
AL549_RS22450	PF09500	Putative thioesterase (yiiD_Cterm)
AL549_RS22455	PF05170	AL549_RS22455
AL549_RS22460	PF01293	Phosphoenolpyruvate carboxykinase
AL549_RS22465	PF01430	Hsp33 protein
AL549_RS22470	PF01479	S4 domain
AL549_RS22475	PF11356	Type IV pilus biogenesis
AL549_RS22480	PF00263	AL549_RS22480
AL549_RS22480	PF03958	Bacterial type II/III secretion system short domain
AL549_RS22485	PF00437	Type II/IV secretion system protein
AL549_RS22490	PF00482	Type II secretion system (T2SS), protein F
AL549_RS22495	PF07963	Prokaryotic N-terminal methylation motif
AL549_RS22495	PF08334	Type II secretion system (T2SS), protein G
AL549_RS22500	PF12019	Type II transport protein GspH
AL549_RS22505	PF02501	Type II secretion system (T2SS), protein I
AL549_RS22505	PF07963	Prokaryotic N-terminal methylation motif
AL549_RS22510	PF07963	Prokaryotic N-terminal methylation motif
AL549_RS22510	PF11612	Type II secretion system (T2SS), protein J
AL549_RS22515	PF03934	Type II secretion system (T2SS), protein K
AL549_RS22520	PF05134	Type II secretion system (T2SS), protein L
AL549_RS22520	PF12693	GspL periplasmic domain
AL549_RS22525	PF04612	Type II secretion system (T2SS), protein M
AL549_RS22530	PF01203	AL549_RS22530
AL549_RS22535	PF00459	Inositol monophosphatase family
AL549_RS22540	PF00293	NUDIX domain
AL549_RS22545	PF01106	NifU-like domain
AL549_RS22545	PF01521	Iron-sulphur cluster biosynthesis
AL549_RS22550	PF00156	Phosphoribosyl transferase domain
AL549_RS22555	PF00561	alpha/beta hydrolase fold
AL549_RS22565	PF00575	S1 RNA binding domain
AL549_RS22565	PF09371	Tex-like protein N-terminal domain
AL549_RS22565	PF12836	Helix-hairpin-helix motif
AL549_RS22565	PF16921	AL549_RS22565
AL549_RS22570	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL549_RS22570	PF03449	Transcription elongation factor, N-terminal
AL549_RS22575	PF00072	Response regulator receiver domain
AL549_RS22575	PF00486	Transcriptional regulatory protein, C terminal
AL549_RS22580	PF00512	His Kinase A (phospho-acceptor) domain
AL549_RS22580	PF00672	HAMP domain
AL549_RS22580	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_RS22585	PF00860	Permease family
AL549_RS22590	PF00270	DEAD/DEAH box helicase
AL549_RS22590	PF00271	Helicase conserved C-terminal domain
AL549_RS22590	PF17191	AL549_RS22590
AL549_RS22595	PF00588	SpoU rRNA Methylase family
AL549_RS22595	PF12105	SpoU, rRNA methylase, C-terminal
AL549_RS22600	PF02824	TGS domain
AL549_RS22600	PF04607	Region found in RelA / SpoT proteins
AL549_RS22600	PF13291	ACT domain
AL549_RS22600	PF13328	HD domain
AL549_RS22605	PF01192	RNA polymerase Rpb6
AL549_RS22610	PF00625	Guanylate kinase
AL549_RS22615	PF13181	Tetratricopeptide repeat
AL549_RS22620	PF03544	Gram-negative bacterial TonB protein C-terminal
AL549_RS22625	PF02472	Biopolymer transport protein ExbD/TolR
AL549_RS22630	PF01618	AL549_RS22630
AL549_RS22635	PF01618	AL549_RS22635
AL549_RS22640	PF11932	AL549_RS22640
AL549_RS22645	PF00593	TonB dependent receptor
AL549_RS22645	PF07715	TonB-dependent Receptor Plug Domain
AL549_RS22650	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS22655	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS22660	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_RS22665	PF00005	ABC transporter
AL549_RS22670	PF00005	ABC transporter
AL549_RS22675	PF00884	Sulfatase
AL549_RS22685	PF06146	AL549_RS22685
AL549_RS22695	PF00892	EamA-like transporter family
AL549_RS22700	PF03755	AL549_RS22700
AL549_RS22700	PF08340	AL549_RS22700
AL549_RS22705	PF01138	3' exoribonuclease family, domain 1
AL549_RS22705	PF03725	3' exoribonuclease family, domain 2
AL549_RS22710	PF00156	Phosphoribosyl transferase domain
AL549_RS22715	PF03279	AL549_RS22715
AL549_RS22720	PF00440	Bacterial regulatory proteins, tetR family
AL549_RS22725	PF02441	Flavoprotein
AL549_RS22725	PF04127	DNA / pantothenate metabolism flavoprotein
AL549_RS22730	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_RS22730	PF00672	HAMP domain
AL549_RS22730	PF17200	AL549_RS22730
AL549_RS22735	PF04002	RadC-like JAB domain
AL549_RS22740	PF00830	Ribosomal L28 family
AL549_RS22745	PF00471	Ribosomal protein L33
AL549_RS22755	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
AL549_RS22755	PF06827	Zinc finger found in FPG and IleRS
AL549_RS22755	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
AL549_RS22760	PF00884	Sulfatase
AL549_RS22765	PF01467	Cytidylyltransferase
AL549_RS22770	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL549_RS22775	PF00535	Glycosyl transferase family 2
AL549_RS22780	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL549_RS22785	PF01219	Prokaryotic diacylglycerol kinase
AL549_RS22790	PF06293	Lipopolysaccharide kinase (Kdo/WaaP) family
AL549_RS22795	PF00884	Sulfatase
AL549_RS22795	PF11893	AL549_RS22795
AL549_RS22800	PF01755	AL549_RS22800
AL549_RS22805	PF02719	Polysaccharide biosynthesis protein
AL549_RS22810	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AL549_RS22815	PF02350	UDP-N-acetylglucosamine 2-epimerase
AL549_RS22820	PF03102	NeuB family
AL549_RS22825	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_RS22830	PF00483	Nucleotidyl transferase
AL549_RS22830	PF00571	CBS domain
AL549_RS22835	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL549_RS22840	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_RS22845	PF02348	Cytidylyltransferase
AL549_RS22850	PF13561	Enoyl-(Acyl carrier protein) reductase
AL549_RS22855	PF00534	Glycosyl transferases group 1
AL549_RS22860	PF00550	Phosphopantetheine attachment site
AL549_RS22865	PF00501	AMP-binding enzyme
AL549_RS22865	PF13193	AMP-binding enzyme C-terminal domain
AL549_RS22870	PF00465	Iron-containing alcohol dehydrogenase
AL549_RS22875	PF04443	AL549_RS22875
AL549_RS22875	PF05893	Acyl-CoA reductase (LuxC)
AL549_RS22885	PF01522	Polysaccharide deacetylase
AL549_RS22895	PF00534	Glycosyl transferases group 1
AL549_RS22895	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
AL549_RS22900	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL549_RS22905	PF03279	AL549_RS22905
AL549_RS22910	PF01370	NAD dependent epimerase/dehydratase family
AL549_RS22915	PF06082	AL549_RS22915
AL549_RS22920	PF06251	Capsule biosynthesis GfcC
AL549_RS22925	PF11102	Group 4 capsule polysaccharide formation lipoprotein gfcB
AL549_RS22960	PF02563	Polysaccharide biosynthesis/export protein
AL549_RS22960	PF10531	SLBB domain
AL549_RS22965	PF05635	23S rRNA-intervening sequence protein
AL549_RS22970	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AL549_RS22975	PF02706	Chain length determinant protein
AL549_RS22975	PF13614	AAA domain
AL549_RS22975	PF13807	AL549_RS22975
AL549_RS22985	PF01943	AL549_RS22985
AL549_RS22985	PF14667	Polysaccharide biosynthesis C-terminal domain
AL549_RS22990	PF04991	AL549_RS22990
AL549_RS22995	PF04991	AL549_RS22995
AL549_RS23000	PF00534	Glycosyl transferases group 1
AL549_RS23005	PF14296	AL549_RS23005
AL549_RS23010	PF01797	Transposase IS200 like
AL549_RS23015	PF13692	Glycosyl transferases group 1
AL549_RS23020	PF02719	Polysaccharide biosynthesis protein
AL549_RS23020	PF08485	Polysaccharide biosynthesis protein C-terminal
AL549_RS23025	PF01370	NAD dependent epimerase/dehydratase family
AL549_RS23030	PF02350	UDP-N-acetylglucosamine 2-epimerase
AL549_RS23035	PF00534	Glycosyl transferases group 1
AL549_RS23050	PF00953	Glycosyl transferase family 4
AL549_RS23055	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AL549_RS23055	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AL549_RS23055	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AL549_RS23070	PF01541	GIY-YIG catalytic domain
AL549_RS23075	PF00753	Metallo-beta-lactamase superfamily
AL549_RS23075	PF07521	RNA-metabolising metallo-beta-lactamase
AL549_RS23075	PF10996	Beta-Casp domain
AL549_RS23105	PF00338	Ribosomal protein S10p/S20e
AL549_RS23110	PF00297	Ribosomal protein L3
AL549_RS23115	PF00573	Ribosomal protein L4/L1 family
AL549_RS23120	PF00276	Ribosomal protein L23
AL549_RS23125	PF00181	Ribosomal Proteins L2, RNA binding domain
AL549_RS23125	PF03947	Ribosomal Proteins L2, C-terminal domain
AL549_RS23130	PF00203	Ribosomal protein S19
AL549_RS23135	PF00237	Ribosomal protein L22p/L17e
AL549_RS23140	PF00189	Ribosomal protein S3, C-terminal domain
AL549_RS23140	PF07650	KH domain
AL549_RS23145	PF00252	Ribosomal protein L16p/L10e
AL549_RS23150	PF00831	Ribosomal L29 protein
AL549_RS23155	PF00366	Ribosomal protein S17
AL549_RS23160	PF00238	Ribosomal protein L14p/L23e
AL549_RS23165	PF00467	KOW motif
AL549_RS23165	PF17136	AL549_RS23165
AL549_RS23170	PF00281	Ribosomal protein L5
AL549_RS23170	PF00673	ribosomal L5P family C-terminus
AL549_RS23175	PF00253	Ribosomal protein S14p/S29e
AL549_RS23180	PF00410	Ribosomal protein S8
AL549_RS23185	PF00347	Ribosomal protein L6
AL549_RS23190	PF00861	Ribosomal L18p/L5e family
AL549_RS23195	PF00333	Ribosomal protein S5, N-terminal domain
AL549_RS23195	PF03719	Ribosomal protein S5, C-terminal domain
AL549_RS23200	PF00327	Ribosomal protein L30p/L7e
AL549_RS23205	PF00828	Ribosomal protein L18e/L15
AL549_RS23210	PF00344	SecY translocase
AL549_RS23215	PF00444	Ribosomal protein L36
AL549_RS23220	PF00416	Ribosomal protein S13/S18
AL549_RS23225	PF00411	Ribosomal protein S11
AL549_RS23230	PF00163	Ribosomal protein S4/S9 N-terminal domain
AL549_RS23230	PF01479	S4 domain
AL549_RS23235	PF01000	RNA polymerase Rpb3/RpoA insert domain
AL549_RS23235	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
AL549_RS23235	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
AL549_RS23240	PF01196	Ribosomal protein L17
AL549_RS23245	PF11075	AL549_RS23245
AL549_RS23250	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL549_RS23250	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL549_RS23255	PF04225	Opacity-associated protein A LysM-like domain
AL549_RS23255	PF08525	AL549_RS23255
AL549_RS23260	PF00892	EamA-like transporter family
AL549_RS23265	PF13673	Acetyltransferase (GNAT) domain
AL549_RS23275	PF00149	Calcineurin-like phosphoesterase
AL549_RS23275	PF02872	5'-nucleotidase, C-terminal domain
AL549_RS23280	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL549_RS23285	PF01507	Phosphoadenosine phosphosulfate reductase family
AL549_RS23290	PF00009	Elongation factor Tu GTP binding domain
AL549_RS23295	PF02080	TrkA-C domain
AL549_RS23295	PF03600	Citrate transporter
AL549_RS23300	PF01583	Adenylylsulphate kinase
AL549_RS23305	PF10987	AL549_RS23305
AL549_RS23310	PF11736	Protein of unknown function (DUF3299)
AL549_RS23315	PF02687	AL549_RS23315
AL549_RS23315	PF12704	MacB-like periplasmic core domain
AL549_RS23320	PF00005	ABC transporter
AL549_RS23325	PF10986	AL549_RS23325
AL549_RS23330	PF10795	AL549_RS23330
AL549_RS23335	PF09695	AL549_RS23335
AL549_RS23340	PF06526	Protein of unknown function (DUF1107)
AL549_RS23345	PF01625	Peptide methionine sulfoxide reductase
AL549_RS23350	PF01103	Surface antigen
AL549_RS23350	PF07244	Surface antigen variable number repeat
AL549_RS23350	PF17243	AL549_RS23350
AL549_RS23355	PF04357	AL549_RS23355
AL549_RS23360	PF06094	AIG2-like family
AL549_RS23365	PF10973	AL549_RS23365
AL549_RS23370	PF00719	Inorganic pyrophosphatase
AL549_RS23375	PF00316	Fructose-1-6-bisphosphatase
AL549_RS23380	PF01225	Mur ligase family, catalytic domain
AL549_RS23380	PF02875	Mur ligase family, glutamate ligase domain
AL549_RS23380	PF08245	Mur ligase middle domain
AL549_RS23385	PF02441	Flavoprotein
AL549_RS23390	PF13343	Bacterial extracellular solute-binding protein
AL549_RS23395	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_RS23400	PF00005	ABC transporter
AL549_RS23405	PF04751	Protein of unknown function (DUF615)
AL549_RS23410	PF01523	Putative modulator of DNA gyrase
AL549_RS23415	PF00571	CBS domain
AL549_RS23415	PF01769	Divalent cation transporter
AL549_RS23415	PF03448	MgtE intracellular N domain
AL549_RS23420	PF00381	PTS HPr component phosphorylation site
AL549_RS23425	PF03668	AL549_RS23425
AL549_RS23430	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL549_RS23435	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AL549_RS23440	PF00309	AL549_RS23440
AL549_RS23440	PF04552	Sigma-54, DNA binding domain
AL549_RS23440	PF04963	Sigma-54 factor, core binding domain
AL549_RS23445	PF00005	ABC transporter
AL549_RS23445	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL549_RS23450	PF03968	OstA-like protein
AL549_RS23455	PF06835	Lipopolysaccharide-assembly, LptC-related
AL549_RS23460	PF08282	haloacid dehalogenase-like hydrolase
AL549_RS23465	PF00571	CBS domain
AL549_RS23465	PF01380	SIS domain
AL549_RS23470	PF01699	Sodium/calcium exchanger protein
AL549_RS23475	PF00005	ABC transporter
AL549_RS23480	PF02405	AL549_RS23480
AL549_RS23485	PF02470	AL549_RS23485
AL549_RS23490	PF05494	Toluene tolerance, Ttg2
AL549_RS23495	PF13466	STAS domain
AL549_RS23500	PF01722	BolA-like protein
AL549_RS23505	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AL549_RS23510	PF01553	Acyltransferase
AL549_RS23515	PF00582	Universal stress protein family
AL549_RS23520	PF06808	AL549_RS23520
AL549_RS23520	PF11874	AL549_RS23520
AL549_RS23525	PF16868	AL549_RS23525
AL549_RS23530	PF01316	Arginine repressor, DNA binding domain
AL549_RS23530	PF02863	Arginine repressor, C-terminal domain
AL549_RS23535	PF00056	lactate/malate dehydrogenase, NAD binding domain
AL549_RS23535	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AL549_RS23540	PF00348	Polyprenyl synthetase
AL549_RS23545	PF00829	Ribosomal prokaryotic L21 protein
AL549_RS23550	PF01016	Ribosomal L27 protein
AL549_RS23555	PF01018	GTP1/OBG
AL549_RS23555	PF01926	50S ribosome-binding GTPase
AL549_RS23560	PF06738	AL549_RS23560
AL549_RS23565	PF12821	AL549_RS23565
AL549_RS23570	PF00186	Dihydrofolate reductase
AL549_RS23575	PF00149	Calcineurin-like phosphoesterase
AL549_RS23580	PF04379	Protein of unknown function (DUF525)
AL549_RS23585	PF00398	Ribosomal RNA adenine dimethylase
AL549_RS23590	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
AL549_RS23595	PF00639	PPIC-type PPIASE domain
AL549_RS23595	PF09312	SurA N-terminal domain
AL549_RS23595	PF13616	PPIC-type PPIASE domain
AL549_RS23600	PF03968	OstA-like protein
AL549_RS23600	PF04453	Organic solvent tolerance protein
AL549_RS23605	PF00226	DnaJ domain
AL549_RS23605	PF05099	Tellurite resistance protein TerB
AL549_RS23610	PF04784	AL549_RS23610
AL549_RS23615	PF00694	Aconitase C-terminal domain
AL549_RS23620	PF00330	Aconitase family (aconitate hydratase)
AL549_RS23625	PF00180	Isocitrate/isopropylmalate dehydrogenase
AL549_RS23630	PF00682	HMGL-like
AL549_RS23630	PF08502	LeuA allosteric (dimerisation) domain
AL549_RS23635	PF08239	Bacterial SH3 domain
AL549_RS23640	PF01569	PAP2 superfamily
AL549_RS23645	PF13528	Glycosyl transferase family 1
AL549_RS23650	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_RS23650	PF03466	LysR substrate binding domain
AL549_RS23655	PF00501	AMP-binding enzyme
AL549_RS23660	PF00205	Thiamine pyrophosphate enzyme, central domain
AL549_RS23660	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL549_RS23660	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL549_RS23665	PF01842	ACT domain
AL549_RS23665	PF10369	Small subunit of acetolactate synthase
AL549_RS23670	PF00990	GGDEF domain
AL549_RS23670	PF13426	PAS domain
AL549_RS23675	PF00392	Bacterial regulatory proteins, gntR family
AL549_RS23675	PF07729	FCD domain
AL549_RS23680	PF00224	Pyruvate kinase, barrel domain
AL549_RS23680	PF02887	Pyruvate kinase, alpha/beta domain
AL549_RS23685	PF00455	AL549_RS23685
AL549_RS23685	PF08220	DeoR-like helix-turn-helix domain
AL549_RS23690	PF01380	SIS domain
AL549_RS23690	PF13522	Glutamine amidotransferase domain
AL549_RS23695	PF05068	Mannitol repressor
AL549_RS23700	PF01232	Mannitol dehydrogenase Rossmann domain
AL549_RS23700	PF08125	Mannitol dehydrogenase C-terminal domain
AL549_RS23705	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL549_RS23705	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL549_RS23705	PF02378	Phosphotransferase system, EIIC
AL549_RS23710	PF03480	Bacterial extracellular solute-binding protein, family 7
AL549_RS23715	PF01553	Acyltransferase
AL549_RS23715	PF13444	Acetyltransferase (GNAT) domain
AL549_RS23720	PF04402	Protein of unknown function (DUF541)
AL549_RS23730	PF00140	Sigma-70 factor, region 1
AL549_RS23730	PF03979	Sigma-70 factor, region 1
AL549_RS23730	PF04539	Sigma-70 region 3
AL549_RS23730	PF04542	Sigma-70 region 2
AL549_RS23730	PF04545	Sigma-70, region 4
AL549_RS23730	PF04546	Sigma-70, non-essential region
AL549_RS23735	PF01807	CHC2 zinc finger
AL549_RS23735	PF08275	DNA primase catalytic core, N-terminal domain
AL549_RS23735	PF08278	DNA primase DnaG DnaB-binding
AL549_RS23735	PF10410	DnaB-helicase binding domain of primase
AL549_RS23735	PF13155	Toprim-like
AL549_RS23740	PF09424	Yqey-like protein
AL549_RS23745	PF01165	Ribosomal protein S21
AL549_RS23750	PF00814	Glycoprotease family
AL549_RS23755	PF00561	alpha/beta hydrolase fold
AL549_RS23760	PF02660	AL549_RS23760
AL549_RS23765	PF02152	Dihydroneopterin aldolase
AL549_RS23770	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AL549_RS23775	PF02673	AL549_RS23775
AL549_RS23780	PF01743	Poly A polymerase head domain
AL549_RS23780	PF01966	HD domain
AL549_RS23780	PF12627	Probable RNA and SrmB- binding site of polymerase A
AL549_RS23785	PF01471	Putative peptidoglycan binding domain
AL549_RS23785	PF13401	AAA domain
AL549_RS23785	PF16537	AL549_RS23785
AL549_RS23790	PF08239	Bacterial SH3 domain
AL549_RS23795	PF01384	AL549_RS23795