AL549_RS19440 86f0235c8f18130aec1ed6b9a585fdd0 208 Gene3D G3DSA:1.10.1670.10 169 205 1.2E-8 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AL549_RS19440 86f0235c8f18130aec1ed6b9a585fdd0 208 SMART SM00478 52 201 2.7E-5 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL549_RS19440 86f0235c8f18130aec1ed6b9a585fdd0 208 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 50 172 7.0E-5 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL549_RS19440 86f0235c8f18130aec1ed6b9a585fdd0 208 SUPERFAMILY SSF48150 34 201 9.94E-31 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL549_RS19440 86f0235c8f18130aec1ed6b9a585fdd0 208 Gene3D G3DSA:1.10.340.30 27 168 6.2E-20 T 28-03-2018 AL549_RS15475 4f3e3e82d6af6d5898a596333b4a5f3c 327 Gene3D G3DSA:3.30.930.10 7 327 6.2E-94 T 28-03-2018 AL549_RS15475 4f3e3e82d6af6d5898a596333b4a5f3c 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 2.3E-112 T 28-03-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AL549_RS15475 4f3e3e82d6af6d5898a596333b4a5f3c 327 SUPERFAMILY SSF46589 14 99 1.2E-22 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 AL549_RS15475 4f3e3e82d6af6d5898a596333b4a5f3c 327 SUPERFAMILY SSF55681 92 327 3.65E-83 T 28-03-2018 AL549_RS15475 4f3e3e82d6af6d5898a596333b4a5f3c 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.346 T 28-03-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AL549_RS15475 4f3e3e82d6af6d5898a596333b4a5f3c 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 3.4E-25 T 28-03-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AL549_RS15475 4f3e3e82d6af6d5898a596333b4a5f3c 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 7.8E-107 T 28-03-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AL549_RS19250 777fa6a4a6d0a2c55a4a4c996e71a551 343 SUPERFAMILY SSF103025 36 256 9.42E-56 T 28-03-2018 AL549_RS19250 777fa6a4a6d0a2c55a4a4c996e71a551 343 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 20 337 42.915 T 28-03-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 AL549_RS19250 777fa6a4a6d0a2c55a4a4c996e71a551 343 Pfam PF01571 Aminomethyltransferase folate-binding domain 48 172 1.4E-7 T 28-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal AL549_RS19250 777fa6a4a6d0a2c55a4a4c996e71a551 343 Gene3D G3DSA:3.30.70.1400 48 254 6.3E-23 T 28-03-2018 AL549_RS19250 777fa6a4a6d0a2c55a4a4c996e71a551 343 SUPERFAMILY SSF101790 258 341 8.5E-17 T 28-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AL549_RS19250 777fa6a4a6d0a2c55a4a4c996e71a551 343 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 202 265 2.6E-23 T 28-03-2018 IPR017703 YgfZ/GcvT conserved site AL549_RS19195 6f83b778f4debc145b7a4941276db046 320 TIGRFAM TIGR00436 era: GTP-binding protein Era 27 299 1.3E-109 T 28-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS19195 6f83b778f4debc145b7a4941276db046 320 Gene3D G3DSA:3.40.50.300 27 196 6.6E-36 T 28-03-2018 AL549_RS19195 6f83b778f4debc145b7a4941276db046 320 Hamap MF_00367 GTPase Era [era]. 24 316 35.717 T 28-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS19195 6f83b778f4debc145b7a4941276db046 320 SUPERFAMILY SSF52540 29 224 7.02E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS19195 6f83b778f4debc145b7a4941276db046 320 Gene3D G3DSA:3.30.300.20 204 319 8.2E-42 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL549_RS19195 6f83b778f4debc145b7a4941276db046 320 SUPERFAMILY SSF54814 200 316 3.6E-41 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AL549_RS19195 6f83b778f4debc145b7a4941276db046 320 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 26 187 1.8E-39 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL549_RS19195 6f83b778f4debc145b7a4941276db046 320 Pfam PF07650 KH domain 227 304 4.3E-21 T 28-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS19195 6f83b778f4debc145b7a4941276db046 320 Pfam PF01926 50S ribosome-binding GTPase 29 143 1.2E-23 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS09035 03aaa4d64c9b21980f4f81c981f8cc72 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 145 1.5E-25 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL549_RS09035 03aaa4d64c9b21980f4f81c981f8cc72 159 SUPERFAMILY SSF55826 2 156 7.85E-43 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL549_RS09035 03aaa4d64c9b21980f4f81c981f8cc72 159 PIRSF PIRSF006181 1 159 1.2E-53 T 28-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AL549_RS09035 03aaa4d64c9b21980f4f81c981f8cc72 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 1.2E-59 T 28-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AL549_RS09035 03aaa4d64c9b21980f4f81c981f8cc72 159 Gene3D G3DSA:3.90.960.10 1 159 1.9E-41 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL549_RS18520 28008c5ee5c1791c0531820b2a56ee03 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 8.4E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS18520 28008c5ee5c1791c0531820b2a56ee03 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 8.4E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS18520 28008c5ee5c1791c0531820b2a56ee03 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 8.4E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS18520 28008c5ee5c1791c0531820b2a56ee03 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 8.4E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS18520 28008c5ee5c1791c0531820b2a56ee03 137 SMART SM00347 23 124 3.5E-15 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS18520 28008c5ee5c1791c0531820b2a56ee03 137 Pfam PF01047 MarR family 33 88 1.3E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS18520 28008c5ee5c1791c0531820b2a56ee03 137 Gene3D G3DSA:1.10.10.10 2 136 4.7E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS18520 28008c5ee5c1791c0531820b2a56ee03 137 SUPERFAMILY SSF46785 6 135 9.69E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS20150 f2c488ef18c7c593725d0a9859e991e1 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 311 1.3E-10 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL549_RS20150 f2c488ef18c7c593725d0a9859e991e1 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 7.5E-112 T 28-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL549_RS20150 f2c488ef18c7c593725d0a9859e991e1 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 36.019 T 28-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL549_RS20150 f2c488ef18c7c593725d0a9859e991e1 334 SUPERFAMILY SSF51735 1 168 2.02E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS20150 f2c488ef18c7c593725d0a9859e991e1 334 Gene3D G3DSA:3.40.50.720 1 162 8.2E-35 T 28-03-2018 AL549_RS20150 f2c488ef18c7c593725d0a9859e991e1 334 Gene3D G3DSA:3.30.360.10 163 308 1.5E-46 T 28-03-2018 AL549_RS20150 f2c488ef18c7c593725d0a9859e991e1 334 SUPERFAMILY SSF55347 154 308 7.09E-46 T 28-03-2018 AL549_RS20150 f2c488ef18c7c593725d0a9859e991e1 334 SMART SM00859 3 146 5.9E-44 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL549_RS20150 f2c488ef18c7c593725d0a9859e991e1 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 144 3.4E-29 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL549_RS20150 f2c488ef18c7c593725d0a9859e991e1 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 28-03-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL549_RS23685 bb44f7ab6c4061e28b15b5fd5faf95f7 253 SUPERFAMILY SSF46785 9 68 6.92E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS23685 bb44f7ab6c4061e28b15b5fd5faf95f7 253 Gene3D G3DSA:1.10.10.10 1 67 4.0E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS23685 bb44f7ab6c4061e28b15b5fd5faf95f7 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 5.3E-43 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AL549_RS23685 bb44f7ab6c4061e28b15b5fd5faf95f7 253 SMART SM01134 73 234 1.4E-55 T 28-03-2018 AL549_RS23685 bb44f7ab6c4061e28b15b5fd5faf95f7 253 SUPERFAMILY SSF100950 76 233 1.74E-31 T 28-03-2018 AL549_RS23685 bb44f7ab6c4061e28b15b5fd5faf95f7 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 1.0E-15 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS23685 bb44f7ab6c4061e28b15b5fd5faf95f7 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 4.1E-6 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS23685 bb44f7ab6c4061e28b15b5fd5faf95f7 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 4.1E-6 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS23685 bb44f7ab6c4061e28b15b5fd5faf95f7 253 SMART SM00420 9 61 2.4E-13 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS23685 bb44f7ab6c4061e28b15b5fd5faf95f7 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL549_RS23685 bb44f7ab6c4061e28b15b5fd5faf95f7 253 Gene3D G3DSA:3.40.50.1360 68 233 2.8E-34 T 28-03-2018 AL549_RS04925 fc0e4bf8419cd4b5e09eefe2696bc241 383 SUPERFAMILY SSF51230 3 91 2.49E-25 T 28-03-2018 IPR011053 Single hybrid motif AL549_RS04925 fc0e4bf8419cd4b5e09eefe2696bc241 383 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL549_RS04925 fc0e4bf8419cd4b5e09eefe2696bc241 383 Pfam PF00364 Biotin-requiring enzyme 5 77 2.1E-18 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AL549_RS04925 fc0e4bf8419cd4b5e09eefe2696bc241 383 Gene3D G3DSA:2.40.50.100 48 131 1.2E-5 T 28-03-2018 AL549_RS04925 fc0e4bf8419cd4b5e09eefe2696bc241 383 Gene3D G3DSA:3.30.559.10 170 383 2.1E-49 T 28-03-2018 AL549_RS04925 fc0e4bf8419cd4b5e09eefe2696bc241 383 SUPERFAMILY SSF52777 167 381 1.2E-55 T 28-03-2018 AL549_RS04925 fc0e4bf8419cd4b5e09eefe2696bc241 383 Gene3D G3DSA:4.10.320.10 132 169 1.8E-11 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL549_RS04925 fc0e4bf8419cd4b5e09eefe2696bc241 383 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 175 382 1.3E-54 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL549_RS04925 fc0e4bf8419cd4b5e09eefe2696bc241 383 SUPERFAMILY SSF47005 124 166 6.02E-9 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL549_RS04925 fc0e4bf8419cd4b5e09eefe2696bc241 383 Gene3D G3DSA:3.90.1170.30 2 47 1.5E-13 T 28-03-2018 AL549_RS04925 fc0e4bf8419cd4b5e09eefe2696bc241 383 Pfam PF02817 e3 binding domain 131 163 5.8E-8 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL549_RS13695 ea6a81d0b69f878088d687e64228fd30 119 SUPERFAMILY SSF54593 6 117 4.81E-22 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS13695 ea6a81d0b69f878088d687e64228fd30 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 8.9E-9 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL549_RS13695 ea6a81d0b69f878088d687e64228fd30 119 Gene3D G3DSA:3.10.180.10 1 119 2.2E-17 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS14330 ea6a81d0b69f878088d687e64228fd30 119 SUPERFAMILY SSF54593 6 117 4.81E-22 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS14330 ea6a81d0b69f878088d687e64228fd30 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 8.9E-9 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL549_RS14330 ea6a81d0b69f878088d687e64228fd30 119 Gene3D G3DSA:3.10.180.10 1 119 2.2E-17 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS12480 d8c052a6d3df1fdee450b65225227e67 569 SMART SM00387 321 432 9.5E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS12480 d8c052a6d3df1fdee450b65225227e67 569 SMART SM00448 451 564 2.8E-35 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS12480 d8c052a6d3df1fdee450b65225227e67 569 Pfam PF00072 Response regulator receiver domain 453 565 3.9E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS12480 d8c052a6d3df1fdee450b65225227e67 569 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 430 3.2E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS12480 d8c052a6d3df1fdee450b65225227e67 569 SUPERFAMILY SSF47384 194 275 2.55E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS12480 d8c052a6d3df1fdee450b65225227e67 569 SUPERFAMILY SSF55874 263 431 5.5E-47 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS12480 d8c052a6d3df1fdee450b65225227e67 569 Gene3D G3DSA:3.30.565.10 269 432 1.5E-47 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS12480 d8c052a6d3df1fdee450b65225227e67 569 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 274 1.1E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS12480 d8c052a6d3df1fdee450b65225227e67 569 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 5.8E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS12480 d8c052a6d3df1fdee450b65225227e67 569 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 5.8E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS12480 d8c052a6d3df1fdee450b65225227e67 569 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 5.8E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS12480 d8c052a6d3df1fdee450b65225227e67 569 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 429 5.8E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS12480 d8c052a6d3df1fdee450b65225227e67 569 Gene3D G3DSA:3.40.50.2300 438 569 3.5E-39 T 28-03-2018 AL549_RS12480 d8c052a6d3df1fdee450b65225227e67 569 Gene3D G3DSA:1.10.287.130 199 268 6.5E-18 T 28-03-2018 AL549_RS12480 d8c052a6d3df1fdee450b65225227e67 569 SUPERFAMILY SSF52172 451 568 1.17E-35 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS12480 d8c052a6d3df1fdee450b65225227e67 569 SMART SM00388 209 274 1.4E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS18655 3a56dbc1159ad860719da73a89dc606b 430 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 32 6.5E-6 T 28-03-2018 IPR013731 Opacity-associated protein A, N-terminal AL549_RS18655 3a56dbc1159ad860719da73a89dc606b 430 Pfam PF01551 Peptidase family M23 296 390 8.5E-31 T 28-03-2018 IPR016047 Peptidase M23 AL549_RS18655 3a56dbc1159ad860719da73a89dc606b 430 Gene3D G3DSA:2.70.70.10 263 426 1.6E-39 T 28-03-2018 AL549_RS18655 3a56dbc1159ad860719da73a89dc606b 430 SUPERFAMILY SSF51261 146 391 9.94E-70 T 28-03-2018 IPR011055 Duplicated hybrid motif AL549_RS18655 3a56dbc1159ad860719da73a89dc606b 430 Pfam PF04225 Opacity-associated protein A LysM-like domain 73 153 6.6E-5 T 28-03-2018 IPR007340 Opacity-associated protein A AL549_RS04810 3f0979c6d5f51cfb81c45f64fc8a16e2 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 17 125 1.5E-35 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL549_RS04810 3f0979c6d5f51cfb81c45f64fc8a16e2 389 SUPERFAMILY SSF56645 6 249 5.1E-82 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL549_RS04810 3f0979c6d5f51cfb81c45f64fc8a16e2 389 SUPERFAMILY SSF47203 234 387 1.39E-48 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL549_RS04810 3f0979c6d5f51cfb81c45f64fc8a16e2 389 Gene3D G3DSA:1.10.540.10 1 127 2.3E-38 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL549_RS04810 3f0979c6d5f51cfb81c45f64fc8a16e2 389 Gene3D G3DSA:2.40.110.10 128 224 4.9E-39 T 28-03-2018 AL549_RS04810 3f0979c6d5f51cfb81c45f64fc8a16e2 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL549_RS04810 3f0979c6d5f51cfb81c45f64fc8a16e2 389 PIRSF PIRSF016578 16 103 9.4E-5 T 28-03-2018 AL549_RS04810 3f0979c6d5f51cfb81c45f64fc8a16e2 389 PIRSF PIRSF016578 135 389 2.0E-14 T 28-03-2018 AL549_RS04810 3f0979c6d5f51cfb81c45f64fc8a16e2 389 Gene3D G3DSA:1.20.140.10 225 389 8.4E-56 T 28-03-2018 AL549_RS04810 3f0979c6d5f51cfb81c45f64fc8a16e2 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL549_RS04810 3f0979c6d5f51cfb81c45f64fc8a16e2 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 1.4E-24 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL549_RS04810 3f0979c6d5f51cfb81c45f64fc8a16e2 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 1.6E-44 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL549_RS00105 2bdae8d0e1363cddc92fc00d00dc4c39 466 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 21 466 5.3E-152 T 28-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AL549_RS00105 2bdae8d0e1363cddc92fc00d00dc4c39 466 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 24 466 2.9E-171 T 28-03-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 AL549_RS00105 2bdae8d0e1363cddc92fc00d00dc4c39 466 Pfam PF02397 Bacterial sugar transferase 276 458 1.4E-66 T 28-03-2018 IPR003362 Bacterial sugar transferase AL549_RS00105 2bdae8d0e1363cddc92fc00d00dc4c39 466 SUPERFAMILY SSF51735 142 269 7.48E-6 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS00105 2bdae8d0e1363cddc92fc00d00dc4c39 466 Gene3D G3DSA:3.40.50.720 139 265 3.6E-15 T 28-03-2018 AL549_RS00105 2bdae8d0e1363cddc92fc00d00dc4c39 466 Pfam PF13727 CoA-binding domain 63 240 2.8E-38 T 28-03-2018 AL549_RS11580 e23c8aaeca412dfc1e04e47b46330daf 647 Gene3D G3DSA:1.10.287.130 328 472 6.6E-11 T 28-03-2018 AL549_RS11580 e23c8aaeca412dfc1e04e47b46330daf 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 7.1E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS11580 e23c8aaeca412dfc1e04e47b46330daf 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 597 7.1E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS11580 e23c8aaeca412dfc1e04e47b46330daf 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 7.1E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS11580 e23c8aaeca412dfc1e04e47b46330daf 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 7.1E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS11580 e23c8aaeca412dfc1e04e47b46330daf 647 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 366 1.3E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS11580 e23c8aaeca412dfc1e04e47b46330daf 647 SUPERFAMILY SSF47384 335 371 1.55E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS11580 e23c8aaeca412dfc1e04e47b46330daf 647 SUPERFAMILY SSF51206 201 311 9.3E-19 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AL549_RS11580 e23c8aaeca412dfc1e04e47b46330daf 647 SMART SM00387 528 641 3.0E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS11580 e23c8aaeca412dfc1e04e47b46330daf 647 Gene3D G3DSA:3.30.565.10 473 640 1.1E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS11580 e23c8aaeca412dfc1e04e47b46330daf 647 SUPERFAMILY SSF52172 3 130 7.63E-9 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS11580 e23c8aaeca412dfc1e04e47b46330daf 647 Pfam PF00027 Cyclic nucleotide-binding domain 202 289 1.8E-14 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL549_RS11580 e23c8aaeca412dfc1e04e47b46330daf 647 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 639 1.8E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS11580 e23c8aaeca412dfc1e04e47b46330daf 647 Gene3D G3DSA:2.60.120.10 178 320 1.4E-17 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS11580 e23c8aaeca412dfc1e04e47b46330daf 647 SUPERFAMILY SSF55874 482 641 5.5E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS11580 e23c8aaeca412dfc1e04e47b46330daf 647 Gene3D G3DSA:3.40.50.2300 1 138 2.1E-9 T 28-03-2018 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 20 623 49.958 T 28-03-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 Gene3D G3DSA:2.40.30.10 246 463 1.8E-44 T 28-03-2018 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 Pfam PF00258 Flavodoxin 89 213 6.1E-28 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00369 Flavodoxin signature 168 178 7.0E-11 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00369 Flavodoxin signature 136 147 7.0E-11 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00369 Flavodoxin signature 192 211 7.0E-11 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00369 Flavodoxin signature 88 101 7.0E-11 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 Pfam PF00175 Oxidoreductase NAD-binding domain 481 587 2.2E-18 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 410 417 2.7E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 480 499 2.7E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 505 514 2.7E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 294 304 2.7E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 549 565 2.7E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 572 580 2.7E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 518 529 2.7E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 Gene3D G3DSA:3.40.50.80 477 623 2.2E-37 T 28-03-2018 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 SUPERFAMILY SSF52343 468 623 7.2E-52 T 28-03-2018 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 28 623 4.1E-254 T 28-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 SUPERFAMILY SSF63380 254 469 1.94E-60 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 SUPERFAMILY SSF52218 86 233 1.58E-46 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 Gene3D G3DSA:3.40.50.360 46 244 6.1E-41 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 Pfam PF00667 FAD binding domain 257 448 1.8E-26 T 28-03-2018 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 AL549_RS19985 b950fd6b2563cc6f99a9bd6b82110c4c 623 PIRSF PIRSF000207 20 623 9.6E-270 T 28-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS11590 fdcfd0e592b87a9a00780260099b3eb5 364 Gene3D G3DSA:3.90.1150.10 262 362 4.9E-37 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS11590 fdcfd0e592b87a9a00780260099b3eb5 364 Pfam PF00266 Aminotransferase class-V 8 352 1.7E-65 T 28-03-2018 IPR000192 Aminotransferase class V domain AL549_RS11590 fdcfd0e592b87a9a00780260099b3eb5 364 Gene3D G3DSA:3.40.640.10 20 261 1.5E-26 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS11590 fdcfd0e592b87a9a00780260099b3eb5 364 SUPERFAMILY SSF53383 8 362 1.78E-119 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS11590 fdcfd0e592b87a9a00780260099b3eb5 364 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 8 362 5.5E-164 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AL549_RS11590 fdcfd0e592b87a9a00780260099b3eb5 364 PIRSF PIRSF000525 2 364 3.8E-156 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AL549_RS11590 fdcfd0e592b87a9a00780260099b3eb5 364 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 6 363 52.31 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AL549_RS11590 fdcfd0e592b87a9a00780260099b3eb5 364 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 191 210 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 1.7E-12 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 Gene3D G3DSA:3.30.230.70 15 252 4.2E-52 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 PIRSF PIRSF005499 2 708 1.2E-295 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF54791 555 623 1.14E-15 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 SMART SM00322 553 618 1.7E-11 T 28-03-2018 IPR004087 K Homology domain GO:0003676 AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 Gene3D G3DSA:3.30.1370.10 555 619 7.6E-14 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF00575 S1 RNA binding domain 620 691 1.5E-18 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 SMART SM00316 621 691 1.8E-25 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 Gene3D G3DSA:1.10.10.400 253 317 4.8E-20 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF50249 608 695 9.42E-22 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF55666 146 236 3.23E-28 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 2.7E-24 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 Gene3D G3DSA:3.30.230.70 318 545 1.5E-56 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF54211 293 489 2.53E-46 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF54211 5 145 1.27E-48 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 Gene3D G3DSA:2.40.50.140 620 697 3.7E-24 T 28-03-2018 AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 1.4E-17 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 7.9E-20 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.16 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF55666 451 550 2.95E-27 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL549_RS18530 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF00013 KH domain 557 615 1.0E-8 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 AL549_RS19125 6ab191866598febe66ef3eb0b672ee67 237 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 106 113 - T 28-03-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL549_RS19125 6ab191866598febe66ef3eb0b672ee67 237 SUPERFAMILY SSF53448 8 231 2.5E-63 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS19125 6ab191866598febe66ef3eb0b672ee67 237 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 231 3.4E-80 T 28-03-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL549_RS19125 6ab191866598febe66ef3eb0b672ee67 237 Gene3D G3DSA:3.90.550.10 1 237 5.1E-53 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS19125 6ab191866598febe66ef3eb0b672ee67 237 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 230 43.58 T 28-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL549_RS19125 6ab191866598febe66ef3eb0b672ee67 237 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 230 6.4E-77 T 28-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL549_RS17480 28a43d9ccff393082f6dd1a8221130a3 581 Pfam PF01514 Secretory protein of YscJ/FliF family 64 250 1.1E-54 T 28-03-2018 IPR006182 Secretory protein YscJ/FliF AL549_RS17480 28a43d9ccff393082f6dd1a8221130a3 581 PIRSF PIRSF004862 29 581 2.8E-172 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL549_RS17480 28a43d9ccff393082f6dd1a8221130a3 581 PRINTS PR01009 Flagellar M-ring protein signature 183 197 1.9E-22 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL549_RS17480 28a43d9ccff393082f6dd1a8221130a3 581 PRINTS PR01009 Flagellar M-ring protein signature 226 244 1.9E-22 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL549_RS17480 28a43d9ccff393082f6dd1a8221130a3 581 PRINTS PR01009 Flagellar M-ring protein signature 376 400 1.9E-22 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL549_RS17480 28a43d9ccff393082f6dd1a8221130a3 581 PRINTS PR01009 Flagellar M-ring protein signature 151 169 1.9E-22 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL549_RS17480 28a43d9ccff393082f6dd1a8221130a3 581 PRINTS PR01009 Flagellar M-ring protein signature 296 314 1.9E-22 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL549_RS17480 28a43d9ccff393082f6dd1a8221130a3 581 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 55 579 1.7E-75 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL549_RS17480 28a43d9ccff393082f6dd1a8221130a3 581 Pfam PF08345 Flagellar M-ring protein C-terminal 283 453 1.8E-40 T 28-03-2018 IPR013556 Flagellar M-ring C-terminal AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 SUPERFAMILY SSF81271 3 61 4.9E-16 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 6.1E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 6.1E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 6.1E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 6.1E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 6.1E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.30.930.10 224 532 1.6E-123 T 28-03-2018 AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.40.50.800 533 642 3.0E-27 T 28-03-2018 IPR004154 Anticodon-binding AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 SUPERFAMILY SSF52954 530 637 1.96E-32 T 28-03-2018 IPR004154 Anticodon-binding AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.10.20.30 1 64 2.7E-18 T 28-03-2018 IPR012675 Beta-grasp domain AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 2.8E-50 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 SUPERFAMILY SSF55681 244 527 1.38E-100 T 28-03-2018 AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 SUPERFAMILY SSF55186 65 242 6.93E-63 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.30.980.10 152 223 2.4E-15 T 28-03-2018 AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.30.980.10 66 151 4.0E-23 T 28-03-2018 AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 1.7E-13 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 6.2E-242 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.089 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 Pfam PF02824 TGS domain 4 61 1.3E-12 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 SMART SM00863 171 220 1.6E-18 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AL549_RS15345 fcf6b36e66f497db663cc92ed5bfb2a5 642 Pfam PF03129 Anticodon binding domain 542 631 4.5E-22 T 28-03-2018 IPR004154 Anticodon-binding AL549_RS11520 1205bad60df4d0f814be648dbdeadcd3 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 2.6E-112 T 28-03-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL549_RS11520 1205bad60df4d0f814be648dbdeadcd3 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 3.6E-31 T 28-03-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL549_RS11520 1205bad60df4d0f814be648dbdeadcd3 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 1.3E-37 T 28-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL549_RS11520 1205bad60df4d0f814be648dbdeadcd3 400 Gene3D G3DSA:3.40.50.720 25 203 1.9E-4 T 28-03-2018 AL549_RS11520 1205bad60df4d0f814be648dbdeadcd3 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.788 T 28-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL549_RS23630 e500defb8be47ecceda6043b560fa6e1 515 SUPERFAMILY SSF110921 392 498 8.24E-21 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL549_RS23630 e500defb8be47ecceda6043b560fa6e1 515 SMART SM00917 369 499 4.1E-28 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL549_RS23630 e500defb8be47ecceda6043b560fa6e1 515 Pfam PF00682 HMGL-like 4 273 2.3E-101 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL549_RS23630 e500defb8be47ecceda6043b560fa6e1 515 Gene3D G3DSA:3.20.20.70 1 331 1.8E-110 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS23630 e500defb8be47ecceda6043b560fa6e1 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL549_RS23630 e500defb8be47ecceda6043b560fa6e1 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL549_RS23630 e500defb8be47ecceda6043b560fa6e1 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 1.8E-237 T 28-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL549_RS23630 e500defb8be47ecceda6043b560fa6e1 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 2.9E-30 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL549_RS23630 e500defb8be47ecceda6043b560fa6e1 515 SUPERFAMILY SSF51569 1 291 2.38E-100 T 28-03-2018 AL549_RS23630 e500defb8be47ecceda6043b560fa6e1 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.356 T 28-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL549_RS14785 f948585ed5d9953653e35bf81958e3ab 170 Pfam PF13527 Acetyltransferase (GNAT) domain 41 123 1.0E-11 T 28-03-2018 AL549_RS14785 f948585ed5d9953653e35bf81958e3ab 170 SUPERFAMILY SSF55729 34 156 7.75E-17 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS14785 f948585ed5d9953653e35bf81958e3ab 170 Gene3D G3DSA:3.40.630.30 7 146 9.9E-7 T 28-03-2018 AL549_RS19265 87abff35110c1b8c571240eeccb12314 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 5.4E-20 T 28-03-2018 AL549_RS19265 87abff35110c1b8c571240eeccb12314 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 5.4E-20 T 28-03-2018 AL549_RS19265 87abff35110c1b8c571240eeccb12314 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 5.4E-20 T 28-03-2018 AL549_RS19265 87abff35110c1b8c571240eeccb12314 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 5.4E-20 T 28-03-2018 AL549_RS19265 87abff35110c1b8c571240eeccb12314 411 Gene3D G3DSA:3.50.50.60 2 365 8.6E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS19265 87abff35110c1b8c571240eeccb12314 411 Pfam PF01494 FAD binding domain 5 347 6.8E-28 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL549_RS19265 87abff35110c1b8c571240eeccb12314 411 SUPERFAMILY SSF51905 5 177 2.69E-59 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS19265 87abff35110c1b8c571240eeccb12314 411 SUPERFAMILY SSF51905 268 386 2.69E-59 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS19265 87abff35110c1b8c571240eeccb12314 411 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 28-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AL549_RS19265 87abff35110c1b8c571240eeccb12314 411 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 1.7E-134 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AL549_RS21010 6edc141c52217640b5a79cf530aae1b0 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 307 4.3E-146 T 28-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AL549_RS21010 6edc141c52217640b5a79cf530aae1b0 307 SUPERFAMILY SSF52540 3 307 4.3E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS21010 6edc141c52217640b5a79cf530aae1b0 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 177.179 T 28-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AL549_RS21010 6edc141c52217640b5a79cf530aae1b0 307 PIRSF PIRSF000545 1 307 3.9E-149 T 28-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AL549_RS21010 6edc141c52217640b5a79cf530aae1b0 307 Gene3D G3DSA:3.40.50.300 1 307 1.0E-56 T 28-03-2018 AL549_RS21010 6edc141c52217640b5a79cf530aae1b0 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 232 3.5E-12 T 28-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 AL549_RS08090 de82e569ae5f089b898b83350f082f97 499 Pfam PF02541 Ppx/GppA phosphatase family 22 304 5.7E-84 T 28-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AL549_RS08090 de82e569ae5f089b898b83350f082f97 499 PIRSF PIRSF001267 1 499 2.0E-199 T 28-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AL549_RS08090 de82e569ae5f089b898b83350f082f97 499 SUPERFAMILY SSF53067 135 305 2.24E-45 T 28-03-2018 AL549_RS08090 de82e569ae5f089b898b83350f082f97 499 Gene3D G3DSA:3.30.420.40 1 121 8.5E-38 T 28-03-2018 AL549_RS08090 de82e569ae5f089b898b83350f082f97 499 Gene3D G3DSA:3.30.420.150 122 300 8.2E-36 T 28-03-2018 AL549_RS08090 de82e569ae5f089b898b83350f082f97 499 SUPERFAMILY SSF53067 9 128 1.62E-35 T 28-03-2018 AL549_RS08090 de82e569ae5f089b898b83350f082f97 499 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 9 302 4.5E-101 T 28-03-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 AL549_RS08090 de82e569ae5f089b898b83350f082f97 499 Gene3D G3DSA:1.10.3210.10 301 489 0.0028 T 28-03-2018 AL549_RS08090 de82e569ae5f089b898b83350f082f97 499 SUPERFAMILY SSF109604 309 498 7.33E-50 T 28-03-2018 AL549_RS04930 f0c9b95e53fae4e1c059c069c900477c 327 SUPERFAMILY SSF52922 190 323 1.57E-37 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL549_RS04930 f0c9b95e53fae4e1c059c069c900477c 327 Gene3D G3DSA:3.40.50.920 197 325 1.7E-32 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL549_RS04930 f0c9b95e53fae4e1c059c069c900477c 327 Gene3D G3DSA:3.40.50.970 1 196 1.2E-61 T 28-03-2018 AL549_RS04930 f0c9b95e53fae4e1c059c069c900477c 327 SUPERFAMILY SSF52518 4 191 8.57E-65 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS04930 f0c9b95e53fae4e1c059c069c900477c 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 8.2E-49 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL549_RS04930 f0c9b95e53fae4e1c059c069c900477c 327 SMART SM00861 4 179 1.6E-62 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL549_RS04930 f0c9b95e53fae4e1c059c069c900477c 327 Pfam PF02780 Transketolase, C-terminal domain 198 315 1.9E-36 T 28-03-2018 IPR033248 Transketolase, C-terminal domain AL549_RS11320 44248316030b212799e312d7fbad90f3 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 247 6.4E-11 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL549_RS11320 44248316030b212799e312d7fbad90f3 343 Gene3D G3DSA:3.90.1170.30 47 101 0.0039 T 28-03-2018 AL549_RS11320 44248316030b212799e312d7fbad90f3 343 SUPERFAMILY SSF111369 47 264 1.57E-31 T 28-03-2018 AL549_RS11320 44248316030b212799e312d7fbad90f3 343 Gene3D G3DSA:2.40.50.100 146 336 9.5E-5 T 28-03-2018 AL549_RS11320 44248316030b212799e312d7fbad90f3 343 Gene3D G3DSA:1.10.287.470 102 145 2.4E-14 T 28-03-2018 AL549_RS11320 44248316030b212799e312d7fbad90f3 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 337 4.5E-87 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL549_RS04150 3c0559b77fcc6d3858b2ad38aab27fba 160 Pfam PF12838 4Fe-4S dicluster domain 106 151 1.4E-7 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS04150 3c0559b77fcc6d3858b2ad38aab27fba 160 Pfam PF12838 4Fe-4S dicluster domain 34 79 6.2E-8 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS04150 3c0559b77fcc6d3858b2ad38aab27fba 160 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 19 154 1.2E-41 T 28-03-2018 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055|GO:0055114 AL549_RS04150 3c0559b77fcc6d3858b2ad38aab27fba 160 SUPERFAMILY SSF46548 31 154 9.42E-20 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL549_RS04150 3c0559b77fcc6d3858b2ad38aab27fba 160 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS04150 3c0559b77fcc6d3858b2ad38aab27fba 160 Gene3D G3DSA:3.30.70.20 72 116 4.0E-4 T 28-03-2018 AL549_RS04150 3c0559b77fcc6d3858b2ad38aab27fba 160 Gene3D G3DSA:1.10.1060.10 5 41 1.3E-4 T 28-03-2018 AL549_RS04150 3c0559b77fcc6d3858b2ad38aab27fba 160 Gene3D G3DSA:3.30.70.20 42 71 3.3E-11 T 28-03-2018 AL549_RS04150 3c0559b77fcc6d3858b2ad38aab27fba 160 Gene3D G3DSA:3.30.70.20 117 160 5.6E-9 T 28-03-2018 AL549_RS12285 19f04decf7333c4be291c87c8d5da822 377 Gene3D G3DSA:3.40.50.2000 197 344 9.3E-34 T 28-03-2018 AL549_RS12285 19f04decf7333c4be291c87c8d5da822 377 Pfam PF13692 Glycosyl transferases group 1 199 325 2.2E-23 T 28-03-2018 AL549_RS12285 19f04decf7333c4be291c87c8d5da822 377 Pfam PF13579 Glycosyl transferase 4-like domain 34 184 1.4E-17 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL549_RS12285 19f04decf7333c4be291c87c8d5da822 377 SUPERFAMILY SSF53756 27 361 9.87E-58 T 28-03-2018 AL549_RS12285 19f04decf7333c4be291c87c8d5da822 377 Gene3D G3DSA:3.40.50.2000 26 196 3.0E-10 T 28-03-2018 AL549_RS08815 1e410d161e0d185618847a71ec3a54b4 393 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 264 9.9E-93 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AL549_RS08815 1e410d161e0d185618847a71ec3a54b4 393 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 284 374 2.0E-27 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL549_RS08815 1e410d161e0d185618847a71ec3a54b4 393 SUPERFAMILY SSF69189 284 376 9.22E-28 T 28-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL549_RS08815 1e410d161e0d185618847a71ec3a54b4 393 SMART SM00936 284 374 1.4E-37 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL549_RS08815 1e410d161e0d185618847a71ec3a54b4 393 Gene3D G3DSA:2.60.410.10 304 374 5.3E-22 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL549_RS08815 1e410d161e0d185618847a71ec3a54b4 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 3.5E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL549_RS08815 1e410d161e0d185618847a71ec3a54b4 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 3.5E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL549_RS08815 1e410d161e0d185618847a71ec3a54b4 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 67 78 3.5E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL549_RS08815 1e410d161e0d185618847a71ec3a54b4 393 Gene3D G3DSA:3.40.710.10 7 303 1.9E-53 T 28-03-2018 AL549_RS08815 1e410d161e0d185618847a71ec3a54b4 393 SUPERFAMILY SSF56601 12 284 5.88E-86 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 PIRSF PIRSF001604 1 669 8.7E-252 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 28-03-2018 IPR018239 NAD-dependent DNA ligase, active site AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 Pfam PF12826 Helix-hairpin-helix motif 511 574 1.3E-23 T 28-03-2018 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 Gene3D G3DSA:3.30.470.30 120 240 4.1E-52 T 28-03-2018 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 SMART SM00292 595 669 4.3E-9 T 28-03-2018 IPR001357 BRCT domain AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 Gene3D G3DSA:1.10.287.610 1 68 1.4E-23 T 28-03-2018 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 SUPERFAMILY SSF56091 5 317 2.08E-123 T 28-03-2018 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 665 1.2E-262 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 Gene3D G3DSA:1.10.150.20 433 506 6.7E-24 T 28-03-2018 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 669 3.1E-11 T 28-03-2018 IPR001357 BRCT domain AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 SMART SM00278 545 564 34.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 SMART SM00278 447 466 100.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 SMART SM00278 481 500 6.7 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 Gene3D G3DSA:3.30.1490.70 241 322 5.0E-25 T 28-03-2018 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 SUPERFAMILY SSF47781 404 584 2.0E-60 T 28-03-2018 IPR010994 RuvA domain 2-like AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 Gene3D G3DSA:3.40.50.10190 573 669 1.3E-22 T 28-03-2018 IPR001357 BRCT domain AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 319 3.6E-132 T 28-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 435 1.3E-10 T 28-03-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 Gene3D G3DSA:1.10.150.20 507 572 3.8E-27 T 28-03-2018 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 Pfam PF14520 Helix-hairpin-helix domain 447 501 1.1E-5 T 28-03-2018 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 28-03-2018 IPR033136 NAD-dependent DNA ligase, conserved site AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 SUPERFAMILY SSF52113 596 668 4.86E-17 T 28-03-2018 IPR001357 BRCT domain AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 Hamap MF_01588 DNA ligase [ligA]. 3 669 53.421 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 Gene3D G3DSA:2.40.50.140 323 391 8.7E-35 T 28-03-2018 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 8.0E-36 T 28-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 SMART SM00532 4 449 1.9E-274 T 28-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AL549_RS09250 2986b9e0a4dd911351b8dfeda5804178 669 SUPERFAMILY SSF50249 319 401 3.43E-29 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS04735 1805c8a23026377eedbc73ffd47a65db 499 Pfam PF07730 Histidine kinase 304 367 3.3E-11 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AL549_RS04735 1805c8a23026377eedbc73ffd47a65db 499 Pfam PF05231 MASE1 15 276 7.9E-20 T 28-03-2018 IPR007895 MASE1 AL549_RS04735 1805c8a23026377eedbc73ffd47a65db 499 SUPERFAMILY SSF55874 372 497 2.36E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS04735 1805c8a23026377eedbc73ffd47a65db 499 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 411 468 1.3E-5 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS04735 1805c8a23026377eedbc73ffd47a65db 499 SMART SM00387 407 499 3.3E-5 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS04735 1805c8a23026377eedbc73ffd47a65db 499 Gene3D G3DSA:3.30.565.10 271 498 9.8E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS04175 cc8e2c1bfab67a725ddb112a9651c140 146 Pfam PF00989 PAS fold 16 134 1.9E-7 T 28-03-2018 IPR013767 PAS fold GO:0006355 AL549_RS04175 cc8e2c1bfab67a725ddb112a9651c140 146 Gene3D G3DSA:3.30.450.20 9 139 1.3E-12 T 28-03-2018 AL549_RS04175 cc8e2c1bfab67a725ddb112a9651c140 146 SUPERFAMILY SSF55785 10 128 6.81E-12 T 28-03-2018 IPR000014 PAS domain AL549_RS03490 e4ff2460d6912b1fb8945e9cec8ee1c4 443 Gene3D G3DSA:2.40.30.10 218 315 2.1E-16 T 28-03-2018 AL549_RS03490 e4ff2460d6912b1fb8945e9cec8ee1c4 443 SUPERFAMILY SSF63380 229 316 1.34E-16 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL549_RS03490 e4ff2460d6912b1fb8945e9cec8ee1c4 443 PRINTS PR00410 Phenol hydroxylase reductase family signature 407 415 1.9E-5 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL549_RS03490 e4ff2460d6912b1fb8945e9cec8ee1c4 443 PRINTS PR00410 Phenol hydroxylase reductase family signature 325 344 1.9E-5 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL549_RS03490 e4ff2460d6912b1fb8945e9cec8ee1c4 443 PRINTS PR00410 Phenol hydroxylase reductase family signature 254 266 1.9E-5 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL549_RS03490 e4ff2460d6912b1fb8945e9cec8ee1c4 443 Pfam PF01794 Ferric reductase like transmembrane component 43 179 2.1E-20 T 28-03-2018 IPR013130 Ferric reductase transmembrane component-like domain AL549_RS03490 e4ff2460d6912b1fb8945e9cec8ee1c4 443 SUPERFAMILY SSF52343 316 440 1.06E-20 T 28-03-2018 AL549_RS03490 e4ff2460d6912b1fb8945e9cec8ee1c4 443 Pfam PF08022 FAD-binding domain 229 315 2.6E-9 T 28-03-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 AL549_RS03490 e4ff2460d6912b1fb8945e9cec8ee1c4 443 Gene3D G3DSA:3.40.50.80 316 443 1.4E-14 T 28-03-2018 AL549_RS03490 e4ff2460d6912b1fb8945e9cec8ee1c4 443 Pfam PF00175 Oxidoreductase NAD-binding domain 327 419 1.6E-5 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL549_RS03815 d586cd882f4896a34c1525feaa3439ff 542 SUPERFAMILY SSF52540 294 526 3.55E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS03815 d586cd882f4896a34c1525feaa3439ff 542 SMART SM00382 312 504 4.0E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS03815 d586cd882f4896a34c1525feaa3439ff 542 SMART SM00382 35 235 1.2E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS03815 d586cd882f4896a34c1525feaa3439ff 542 Gene3D G3DSA:3.40.50.300 275 541 2.6E-75 T 28-03-2018 AL549_RS03815 d586cd882f4896a34c1525feaa3439ff 542 Gene3D G3DSA:3.40.50.300 3 274 3.8E-65 T 28-03-2018 AL549_RS03815 d586cd882f4896a34c1525feaa3439ff 542 Pfam PF00005 ABC transporter 26 185 5.4E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS03815 d586cd882f4896a34c1525feaa3439ff 542 Pfam PF00005 ABC transporter 304 455 2.0E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS03815 d586cd882f4896a34c1525feaa3439ff 542 SUPERFAMILY SSF52540 6 256 1.36E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS03815 d586cd882f4896a34c1525feaa3439ff 542 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 538 0.001 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS03815 d586cd882f4896a34c1525feaa3439ff 542 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 269 2.2E-6 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS03815 d586cd882f4896a34c1525feaa3439ff 542 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS03815 d586cd882f4896a34c1525feaa3439ff 542 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS02220 f8b8edcf4079c497da4236be4b17e4f6 858 Gene3D G3DSA:2.60.220.10 582 752 1.3E-23 T 28-03-2018 AL549_RS02220 f8b8edcf4079c497da4236be4b17e4f6 858 SUPERFAMILY SSF48230 25 354 1.26E-75 T 28-03-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 AL549_RS02220 f8b8edcf4079c497da4236be4b17e4f6 858 Gene3D G3DSA:2.70.98.10 331 581 1.2E-74 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL549_RS02220 f8b8edcf4079c497da4236be4b17e4f6 858 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 332 571 9.4E-66 T 28-03-2018 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 AL549_RS02220 f8b8edcf4079c497da4236be4b17e4f6 858 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 29 312 3.8E-29 T 28-03-2018 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical AL549_RS02220 f8b8edcf4079c497da4236be4b17e4f6 858 SUPERFAMILY SSF74650 329 583 2.88E-78 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AL549_RS02220 f8b8edcf4079c497da4236be4b17e4f6 858 Gene3D G3DSA:1.50.10.100 26 330 1.1E-59 T 28-03-2018 AL549_RS02220 f8b8edcf4079c497da4236be4b17e4f6 858 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 588 653 3.7E-12 T 28-03-2018 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 AL549_RS02220 f8b8edcf4079c497da4236be4b17e4f6 858 SUPERFAMILY SSF49863 586 684 2.55E-17 T 28-03-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 AL549_RS08110 7193a0fa9f28df81e436076d753aa586 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS08110 7193a0fa9f28df81e436076d753aa586 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 2.0E-122 T 28-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AL549_RS08110 7193a0fa9f28df81e436076d753aa586 272 Gene3D G3DSA:3.40.50.300 14 270 2.7E-60 T 28-03-2018 AL549_RS08110 7193a0fa9f28df81e436076d753aa586 272 Pfam PF00005 ABC transporter 42 197 6.0E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS08110 7193a0fa9f28df81e436076d753aa586 272 SUPERFAMILY SSF52540 22 258 4.42E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS08110 7193a0fa9f28df81e436076d753aa586 272 SMART SM00382 50 247 5.6E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS19200 b888679212586fdca086b174896e19fc 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.378 T 28-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AL549_RS19200 b888679212586fdca086b174896e19fc 225 SMART SM00535 20 148 4.4E-57 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AL549_RS19200 b888679212586fdca086b174896e19fc 225 SMART SM00358 155 223 8.9E-22 T 28-03-2018 IPR014720 Double-stranded RNA-binding domain AL549_RS19200 b888679212586fdca086b174896e19fc 225 SUPERFAMILY SSF69065 4 158 1.1E-50 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AL549_RS19200 b888679212586fdca086b174896e19fc 225 SUPERFAMILY SSF54768 108 222 4.24E-28 T 28-03-2018 AL549_RS19200 b888679212586fdca086b174896e19fc 225 Gene3D G3DSA:3.30.160.20 152 225 3.6E-21 T 28-03-2018 AL549_RS19200 b888679212586fdca086b174896e19fc 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 4.0E-15 T 28-03-2018 IPR014720 Double-stranded RNA-binding domain AL549_RS19200 b888679212586fdca086b174896e19fc 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AL549_RS19200 b888679212586fdca086b174896e19fc 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 222 3.0E-75 T 28-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AL549_RS19200 b888679212586fdca086b174896e19fc 225 Gene3D G3DSA:1.10.1520.10 2 151 5.5E-45 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AL549_RS19200 b888679212586fdca086b174896e19fc 225 Pfam PF14622 Ribonuclease-III-like 18 142 2.4E-34 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AL549_RS14005 2f29da45ff704f953ba009a244a229da 40 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 8.5E-13 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS15230 2f29da45ff704f953ba009a244a229da 40 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 8.5E-13 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS03235 1968255f7d025cd98f47319d1f98a050 309 Gene3D G3DSA:3.40.1190.20 1 309 1.8E-52 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS03235 1968255f7d025cd98f47319d1f98a050 309 Pfam PF00294 pfkB family carbohydrate kinase 6 304 1.1E-57 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AL549_RS03235 1968255f7d025cd98f47319d1f98a050 309 SUPERFAMILY SSF53613 6 301 2.34E-71 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS03235 1968255f7d025cd98f47319d1f98a050 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL549_RS11230 a7a1e328a174f12b507a78f18b5e3059 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL549_RS11230 a7a1e328a174f12b507a78f18b5e3059 820 Gene3D G3DSA:3.40.228.10 456 517 0.0023 T 28-03-2018 AL549_RS11230 a7a1e328a174f12b507a78f18b5e3059 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 1.3E-23 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL549_RS11230 a7a1e328a174f12b507a78f18b5e3059 820 SUPERFAMILY SSF53706 42 660 7.59E-169 T 28-03-2018 AL549_RS11230 a7a1e328a174f12b507a78f18b5e3059 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.1E-4 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL549_RS11230 a7a1e328a174f12b507a78f18b5e3059 820 Gene3D G3DSA:2.40.40.20 657 813 9.0E-29 T 28-03-2018 AL549_RS11230 a7a1e328a174f12b507a78f18b5e3059 820 Gene3D G3DSA:3.90.55.10 527 600 5.9E-20 T 28-03-2018 AL549_RS11230 a7a1e328a174f12b507a78f18b5e3059 820 Gene3D G3DSA:3.90.55.10 38 123 5.4E-14 T 28-03-2018 AL549_RS11230 a7a1e328a174f12b507a78f18b5e3059 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL549_RS11230 a7a1e328a174f12b507a78f18b5e3059 820 Pfam PF00384 Molybdopterin oxidoreductase 87 561 2.2E-80 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS11230 a7a1e328a174f12b507a78f18b5e3059 820 SUPERFAMILY SSF50692 669 817 5.42E-41 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AL549_RS11230 a7a1e328a174f12b507a78f18b5e3059 820 Gene3D G3DSA:3.40.228.10 183 443 1.6E-55 T 28-03-2018 AL549_RS11230 a7a1e328a174f12b507a78f18b5e3059 820 Gene3D G3DSA:3.40.228.10 601 656 1.2E-6 T 28-03-2018 AL549_RS11230 a7a1e328a174f12b507a78f18b5e3059 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 28-03-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 AL549_RS10365 a7bf55fb1ccc09831592161fc65a4fe7 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 316 4.5E-24 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS10365 a7bf55fb1ccc09831592161fc65a4fe7 324 Gene3D G3DSA:3.40.50.300 1 324 4.2E-74 T 28-03-2018 AL549_RS10365 a7bf55fb1ccc09831592161fc65a4fe7 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 6.0E-18 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS10365 a7bf55fb1ccc09831592161fc65a4fe7 324 Pfam PF00005 ABC transporter 25 181 2.0E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS10365 a7bf55fb1ccc09831592161fc65a4fe7 324 SMART SM00382 33 239 2.3E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS10365 a7bf55fb1ccc09831592161fc65a4fe7 324 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS10365 a7bf55fb1ccc09831592161fc65a4fe7 324 SUPERFAMILY SSF52540 32 302 1.66E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS07195 17e06400d52eb01a80777687b1ce4f70 157 PRINTS PR00885 Bacterial general secretion pathway protein H signature 18 32 9.0E-6 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL549_RS07195 17e06400d52eb01a80777687b1ce4f70 157 PRINTS PR00885 Bacterial general secretion pathway protein H signature 148 157 9.0E-6 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL549_RS07195 17e06400d52eb01a80777687b1ce4f70 157 PRINTS PR00885 Bacterial general secretion pathway protein H signature 3 17 9.0E-6 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL549_RS07195 17e06400d52eb01a80777687b1ce4f70 157 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS07195 17e06400d52eb01a80777687b1ce4f70 157 Gene3D G3DSA:3.30.700.10 8 150 9.4E-15 T 28-03-2018 AL549_RS07195 17e06400d52eb01a80777687b1ce4f70 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 2.8E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS07195 17e06400d52eb01a80777687b1ce4f70 157 SUPERFAMILY SSF54523 8 150 8.63E-15 T 28-03-2018 AL549_RS07195 17e06400d52eb01a80777687b1ce4f70 157 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 1.2E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS02165 77e4b89083464f56636e0f99735f12dd 409 Pfam PF02954 Bacterial regulatory protein, Fis family 361 399 1.1E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS02165 77e4b89083464f56636e0f99735f12dd 409 Gene3D G3DSA:1.10.8.60 277 350 5.3E-13 T 28-03-2018 AL549_RS02165 77e4b89083464f56636e0f99735f12dd 409 SMART SM00448 3 114 6.7E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS02165 77e4b89083464f56636e0f99735f12dd 409 SUPERFAMILY SSF46689 318 402 1.39E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS02165 77e4b89083464f56636e0f99735f12dd 409 SUPERFAMILY SSF52540 144 335 1.35E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS02165 77e4b89083464f56636e0f99735f12dd 409 Gene3D G3DSA:3.40.50.300 139 273 1.7E-5 T 28-03-2018 AL549_RS02165 77e4b89083464f56636e0f99735f12dd 409 Gene3D G3DSA:1.10.10.60 351 403 6.3E-12 T 28-03-2018 AL549_RS02165 77e4b89083464f56636e0f99735f12dd 409 Pfam PF14532 Sigma-54 interaction domain 145 245 2.0E-6 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL549_RS02165 77e4b89083464f56636e0f99735f12dd 409 SUPERFAMILY SSF52172 4 186 1.99E-39 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS02165 77e4b89083464f56636e0f99735f12dd 409 Pfam PF00072 Response regulator receiver domain 5 115 3.3E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS02165 77e4b89083464f56636e0f99735f12dd 409 Gene3D G3DSA:3.40.50.2300 1 138 2.3E-33 T 28-03-2018 AL549_RS04105 20c358cc7b3feae7d63e5077e1aa6ae1 298 SMART SM01130 3 294 3.4E-64 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL549_RS04105 20c358cc7b3feae7d63e5077e1aa6ae1 298 SUPERFAMILY SSF51569 2 296 2.93E-71 T 28-03-2018 AL549_RS04105 20c358cc7b3feae7d63e5077e1aa6ae1 298 Gene3D G3DSA:3.20.20.70 1 297 4.4E-70 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS04105 20c358cc7b3feae7d63e5077e1aa6ae1 298 PIRSF PIRSF001365 1 298 4.1E-66 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL549_RS04105 20c358cc7b3feae7d63e5077e1aa6ae1 298 Pfam PF00701 Dihydrodipicolinate synthetase family 3 290 1.5E-47 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL549_RS04105 20c358cc7b3feae7d63e5077e1aa6ae1 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 2.5E-7 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL549_RS04105 20c358cc7b3feae7d63e5077e1aa6ae1 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 2.5E-7 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL549_RS04105 20c358cc7b3feae7d63e5077e1aa6ae1 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 2.5E-7 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 SMART SM00073 1155 1252 8.8E-5 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 Gene3D G3DSA:3.30.565.10 675 843 1.7E-47 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 Pfam PF00512 His Kinase A (phospho-acceptor) domain 606 671 2.9E-21 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 718 830 1.2E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 SUPERFAMILY SSF47384 591 672 1.39E-22 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 474 593 9.8E-16 T 28-03-2018 IPR000014 PAS domain AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 SUPERFAMILY SSF52172 851 970 6.69E-26 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 Pfam PF00989 PAS fold 474 582 6.7E-12 T 28-03-2018 IPR013767 PAS fold GO:0006355 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 Gene3D G3DSA:3.30.450.20 483 609 6.1E-24 T 28-03-2018 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 Pfam PF01627 Hpt domain 1166 1250 3.8E-13 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 Gene3D G3DSA:3.30.450.40 290 482 3.0E-8 T 28-03-2018 IPR029016 GAF domain-like AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 Pfam PF00072 Response regulator receiver domain 855 965 4.5E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 Pfam PF00072 Response regulator receiver domain 994 1104 1.3E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 SMART SM00086 544 586 0.0068 T 28-03-2018 IPR001610 PAC motif AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 Gene3D G3DSA:1.10.287.130 610 667 1.5E-20 T 28-03-2018 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 SUPERFAMILY SSF52172 989 1110 3.98E-36 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 SMART SM00387 718 834 1.6E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 SUPERFAMILY SSF55874 660 830 1.7E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 Gene3D G3DSA:3.40.50.2300 849 980 2.1E-25 T 28-03-2018 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 SMART SM00448 991 1104 4.0E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 SMART SM00448 852 965 4.0E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 SUPERFAMILY SSF55785 476 589 5.06E-17 T 28-03-2018 IPR000014 PAS domain AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 SUPERFAMILY SSF55781 287 450 1.52E-7 T 28-03-2018 IPR029016 GAF domain-like AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 Gene3D G3DSA:1.20.120.160 1137 1326 2.7E-18 T 28-03-2018 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 PRINTS PR00344 Bacterial sensor protein C-terminal signature 794 812 8.5E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 PRINTS PR00344 Bacterial sensor protein C-terminal signature 759 773 8.5E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 PRINTS PR00344 Bacterial sensor protein C-terminal signature 818 831 8.5E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 PRINTS PR00344 Bacterial sensor protein C-terminal signature 777 787 8.5E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 Gene3D G3DSA:3.40.50.2300 989 1124 1.9E-38 T 28-03-2018 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 SUPERFAMILY SSF47226 1087 1100 1.96E-18 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 SUPERFAMILY SSF47226 1145 1228 1.96E-18 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 SMART SM00388 606 671 9.2E-27 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS02860 b08b01887dbd5019b3687eba27ffd5ff 1328 SMART SM00091 471 538 2.3E-6 T 28-03-2018 IPR000014 PAS domain AL549_RS03505 c1feb031d5f92ed90de028ef01acce2e 522 SMART SM00382 360 522 0.0086 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS03505 c1feb031d5f92ed90de028ef01acce2e 522 SMART SM00382 28 213 4.5E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS03505 c1feb031d5f92ed90de028ef01acce2e 522 SUPERFAMILY SSF52540 353 512 4.12E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS03505 c1feb031d5f92ed90de028ef01acce2e 522 Gene3D G3DSA:3.40.50.300 342 520 7.0E-32 T 28-03-2018 AL549_RS03505 c1feb031d5f92ed90de028ef01acce2e 522 Gene3D G3DSA:3.40.50.300 1 276 4.5E-45 T 28-03-2018 AL549_RS03505 c1feb031d5f92ed90de028ef01acce2e 522 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS03505 c1feb031d5f92ed90de028ef01acce2e 522 Pfam PF00005 ABC transporter 353 480 1.1E-16 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS03505 c1feb031d5f92ed90de028ef01acce2e 522 Pfam PF00005 ABC transporter 22 169 2.7E-19 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS03505 c1feb031d5f92ed90de028ef01acce2e 522 SUPERFAMILY SSF52540 3 234 2.44E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16825 2550beb03b2295fb08c7799049b938ac 583 SMART SM00382 368 555 1.9E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS16825 2550beb03b2295fb08c7799049b938ac 583 Gene3D G3DSA:3.40.50.300 327 581 2.5E-79 T 28-03-2018 AL549_RS16825 2550beb03b2295fb08c7799049b938ac 583 SUPERFAMILY SSF52540 332 580 4.07E-94 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16825 2550beb03b2295fb08c7799049b938ac 583 Pfam PF00005 ABC transporter 359 509 2.3E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS16825 2550beb03b2295fb08c7799049b938ac 583 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 6.7E-244 T 28-03-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 AL549_RS16825 2550beb03b2295fb08c7799049b938ac 583 SUPERFAMILY SSF90123 14 327 1.7E-74 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS16825 2550beb03b2295fb08c7799049b938ac 583 Gene3D G3DSA:1.20.1560.10 4 326 2.8E-67 T 28-03-2018 AL549_RS16825 2550beb03b2295fb08c7799049b938ac 583 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS16825 2550beb03b2295fb08c7799049b938ac 583 Pfam PF00664 ABC transporter transmembrane region 28 293 2.5E-55 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS23270 a792ce925ee082664474bc97d44a4283 187 Gene3D G3DSA:1.10.10.60 125 187 3.3E-4 T 28-03-2018 AL549_RS23270 a792ce925ee082664474bc97d44a4283 187 SUPERFAMILY SSF51206 17 137 1.96E-20 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AL549_RS23270 a792ce925ee082664474bc97d44a4283 187 Gene3D G3DSA:2.60.120.10 4 124 6.3E-12 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS10465 61310c0234bd3aa69a3636d5993f5edf 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 2.6E-45 T 28-03-2018 IPR007376 dsDNA mimic, putative AL549_RS10465 61310c0234bd3aa69a3636d5993f5edf 106 Gene3D G3DSA:3.10.450.140 6 104 7.5E-44 T 28-03-2018 IPR007376 dsDNA mimic, putative AL549_RS10465 61310c0234bd3aa69a3636d5993f5edf 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 37.328 T 28-03-2018 IPR007376 dsDNA mimic, putative AL549_RS10465 61310c0234bd3aa69a3636d5993f5edf 106 PIRSF PIRSF004916 1 105 2.2E-51 T 28-03-2018 IPR007376 dsDNA mimic, putative AL549_RS10465 61310c0234bd3aa69a3636d5993f5edf 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 18 104 1.0E-44 T 28-03-2018 IPR007376 dsDNA mimic, putative AL549_RS10465 61310c0234bd3aa69a3636d5993f5edf 106 SUPERFAMILY SSF102816 3 105 5.89E-48 T 28-03-2018 IPR007376 dsDNA mimic, putative AL549_RS04585 970c3cd8bacfacfb5ebc34e7548086e0 411 SUPERFAMILY SSF53218 181 326 1.05E-41 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS04585 970c3cd8bacfacfb5ebc34e7548086e0 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 3.9E-47 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL549_RS04585 970c3cd8bacfacfb5ebc34e7548086e0 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AL549_RS04585 970c3cd8bacfacfb5ebc34e7548086e0 411 Gene3D G3DSA:2.40.340.10 333 404 2.5E-18 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL549_RS04585 970c3cd8bacfacfb5ebc34e7548086e0 411 Gene3D G3DSA:2.170.190.11 64 145 4.3E-27 T 28-03-2018 AL549_RS04585 970c3cd8bacfacfb5ebc34e7548086e0 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 3.4E-20 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL549_RS04585 970c3cd8bacfacfb5ebc34e7548086e0 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 5.1E-33 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS04585 970c3cd8bacfacfb5ebc34e7548086e0 411 SUPERFAMILY SSF63882 7 180 1.57E-57 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL549_RS04585 970c3cd8bacfacfb5ebc34e7548086e0 411 Gene3D G3DSA:3.40.980.10 154 328 1.2E-51 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS04585 970c3cd8bacfacfb5ebc34e7548086e0 411 SMART SM00852 184 321 1.5E-41 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS04585 970c3cd8bacfacfb5ebc34e7548086e0 411 Pfam PF00994 Probable molybdopterin binding domain 187 320 2.0E-25 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS04585 970c3cd8bacfacfb5ebc34e7548086e0 411 SUPERFAMILY SSF63867 332 410 1.03E-22 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL549_RS04585 970c3cd8bacfacfb5ebc34e7548086e0 411 Gene3D G3DSA:3.90.105.10 31 63 5.4E-12 T 28-03-2018 AL549_RS16570 bd8286dc8528dbd333f82d1dcf19a17f 266 Pfam PF02698 DUF218 domain 80 242 6.5E-27 T 28-03-2018 IPR003848 Domain of unknown function DUF218 AL549_RS16570 bd8286dc8528dbd333f82d1dcf19a17f 266 Gene3D G3DSA:3.40.50.620 73 213 1.4E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS15990 63ab899ed87f8c9b1ba16496b43a67fa 514 SUPERFAMILY SSF55785 84 174 2.27E-10 T 28-03-2018 IPR000014 PAS domain AL549_RS15990 63ab899ed87f8c9b1ba16496b43a67fa 514 Pfam PF00989 PAS fold 84 132 4.2E-6 T 28-03-2018 IPR013767 PAS fold GO:0006355 AL549_RS15990 63ab899ed87f8c9b1ba16496b43a67fa 514 Gene3D G3DSA:3.30.70.260 1 82 1.1E-8 T 28-03-2018 AL549_RS15990 63ab899ed87f8c9b1ba16496b43a67fa 514 SUPERFAMILY SSF46689 460 512 6.57E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS15990 63ab899ed87f8c9b1ba16496b43a67fa 514 Gene3D G3DSA:1.10.8.60 377 448 1.8E-17 T 28-03-2018 AL549_RS15990 63ab899ed87f8c9b1ba16496b43a67fa 514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 83 139 8.4E-6 T 28-03-2018 IPR000014 PAS domain AL549_RS15990 63ab899ed87f8c9b1ba16496b43a67fa 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL549_RS15990 63ab899ed87f8c9b1ba16496b43a67fa 514 Gene3D G3DSA:3.30.450.20 83 182 8.5E-10 T 28-03-2018 AL549_RS15990 63ab899ed87f8c9b1ba16496b43a67fa 514 Pfam PF00158 Sigma-54 interaction domain 206 370 1.2E-57 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL549_RS15990 63ab899ed87f8c9b1ba16496b43a67fa 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 2.7E-28 T 28-03-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 AL549_RS15990 63ab899ed87f8c9b1ba16496b43a67fa 514 Gene3D G3DSA:1.10.10.60 453 513 8.0E-8 T 28-03-2018 AL549_RS15990 63ab899ed87f8c9b1ba16496b43a67fa 514 SMART SM00382 225 368 5.4E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS15990 63ab899ed87f8c9b1ba16496b43a67fa 514 Gene3D G3DSA:3.40.50.300 201 376 3.7E-23 T 28-03-2018 AL549_RS15990 63ab899ed87f8c9b1ba16496b43a67fa 514 SMART SM00091 80 146 3.9E-8 T 28-03-2018 IPR000014 PAS domain AL549_RS15990 63ab899ed87f8c9b1ba16496b43a67fa 514 SUPERFAMILY SSF52540 205 445 3.18E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS15990 63ab899ed87f8c9b1ba16496b43a67fa 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL549_RS15990 63ab899ed87f8c9b1ba16496b43a67fa 514 SUPERFAMILY SSF55021 1 68 5.6E-6 T 28-03-2018 AL549_RS15990 63ab899ed87f8c9b1ba16496b43a67fa 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL549_RS00555 81c1483fbe2f2d246b90c6eafb5e67ae 417 Gene3D G3DSA:3.40.50.1110 132 408 1.7E-52 T 28-03-2018 AL549_RS00555 81c1483fbe2f2d246b90c6eafb5e67ae 417 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 146 404 6.7E-18 T 28-03-2018 IPR001087 GDSL lipase/esterase GO:0016788 AL549_RS00555 81c1483fbe2f2d246b90c6eafb5e67ae 417 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 146 157 - T 28-03-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 AL549_RS00555 81c1483fbe2f2d246b90c6eafb5e67ae 417 SUPERFAMILY SSF52266 145 341 9.66E-21 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL549_RS00555 81c1483fbe2f2d246b90c6eafb5e67ae 417 SUPERFAMILY SSF52266 375 406 9.66E-21 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL549_RS04070 98fc0f2781f30a97587aac632f0f40bf 557 SUPERFAMILY SSF53850 122 553 8.87E-45 T 28-03-2018 AL549_RS04070 98fc0f2781f30a97587aac632f0f40bf 557 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 313 1.1E-16 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL549_RS04070 98fc0f2781f30a97587aac632f0f40bf 557 Gene3D G3DSA:3.90.76.10 147 239 1.4E-15 T 28-03-2018 AL549_RS04070 98fc0f2781f30a97587aac632f0f40bf 557 Pfam PF12793 Sugar transport-related sRNA regulator N-term 7 117 2.3E-16 T 28-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AL549_RS04070 98fc0f2781f30a97587aac632f0f40bf 557 Gene3D G3DSA:3.40.190.10 240 379 1.0E-9 T 28-03-2018 AL549_RS04070 98fc0f2781f30a97587aac632f0f40bf 557 PIRSF PIRSF002741 485 557 0.05 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL549_RS04070 98fc0f2781f30a97587aac632f0f40bf 557 PIRSF PIRSF002741 86 365 6.8E-27 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 Pfam PF07516 SecA Wing and Scaffold domain 617 829 2.9E-65 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 Gene3D G3DSA:1.10.3060.10 634 731 1.1E-29 T 28-03-2018 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 Pfam PF01043 SecA preprotein cross-linking domain 232 359 3.0E-38 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 SUPERFAMILY SSF81767 227 369 1.22E-42 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 SUPERFAMILY SSF81886 620 840 1.44E-82 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 SUPERFAMILY SSF81886 883 895 1.44E-82 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 Gene3D G3DSA:3.40.50.300 418 633 5.1E-54 T 28-03-2018 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 SMART SM00958 228 359 3.1E-81 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 SUPERFAMILY SSF52540 418 610 2.01E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 SUPERFAMILY SSF52540 369 416 1.31E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 SUPERFAMILY SSF52540 5 228 1.31E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 PRINTS PR00906 SecA protein signature 101 115 1.2E-72 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 PRINTS PR00906 SecA protein signature 117 127 1.2E-72 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 PRINTS PR00906 SecA protein signature 414 427 1.2E-72 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 PRINTS PR00906 SecA protein signature 170 190 1.2E-72 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 PRINTS PR00906 SecA protein signature 340 362 1.2E-72 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 PRINTS PR00906 SecA protein signature 377 394 1.2E-72 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 PRINTS PR00906 SecA protein signature 63 87 1.2E-72 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 ProSitePatterns PS01312 SecA family signature. 501 516 - T 28-03-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 Gene3D G3DSA:3.10.450.50 732 907 8.0E-53 T 28-03-2018 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 Pfam PF02810 SEC-C motif 887 905 2.0E-10 T 28-03-2018 IPR004027 SEC-C motif AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.014 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 Gene3D G3DSA:3.40.50.300 9 266 7.6E-56 T 28-03-2018 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 Gene3D G3DSA:3.40.50.300 308 417 6.8E-8 T 28-03-2018 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 SMART SM00957 6 403 0.0 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AL549_RS07580 8dad434667e99b63ead97866cedfa38b 907 Pfam PF07517 SecA DEAD-like domain 7 403 2.9E-133 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AL549_RS18750 3cea446ad4c609a75650f6b1245b46fd 541 SUPERFAMILY SSF161098 281 535 2.88E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS18750 3cea446ad4c609a75650f6b1245b46fd 541 Gene3D G3DSA:1.10.3720.10 38 264 2.6E-30 T 28-03-2018 AL549_RS18750 3cea446ad4c609a75650f6b1245b46fd 541 Gene3D G3DSA:1.10.3720.10 316 540 4.6E-27 T 28-03-2018 AL549_RS18750 3cea446ad4c609a75650f6b1245b46fd 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 253 5.7E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS18750 3cea446ad4c609a75650f6b1245b46fd 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 342 537 3.0E-6 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS18750 3cea446ad4c609a75650f6b1245b46fd 541 SUPERFAMILY SSF161098 9 258 7.98E-44 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS08770 9a586b4ca2fc27739f28b1d629d3e79c 315 Gene3D G3DSA:3.40.50.2300 174 304 6.9E-26 T 28-03-2018 AL549_RS08770 9a586b4ca2fc27739f28b1d629d3e79c 315 Gene3D G3DSA:3.40.50.2300 57 173 1.8E-22 T 28-03-2018 AL549_RS08770 9a586b4ca2fc27739f28b1d629d3e79c 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 28-03-2018 AL549_RS08770 9a586b4ca2fc27739f28b1d629d3e79c 315 SUPERFAMILY SSF53822 63 308 5.1E-61 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS08770 9a586b4ca2fc27739f28b1d629d3e79c 315 Gene3D G3DSA:1.10.260.40 5 56 2.4E-19 T 28-03-2018 AL549_RS08770 9a586b4ca2fc27739f28b1d629d3e79c 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 310 2.7E-134 T 28-03-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 AL549_RS08770 9a586b4ca2fc27739f28b1d629d3e79c 315 SUPERFAMILY SSF47413 3 60 2.51E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS08770 9a586b4ca2fc27739f28b1d629d3e79c 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.7E-17 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS08770 9a586b4ca2fc27739f28b1d629d3e79c 315 Pfam PF13377 Periplasmic binding protein-like domain 168 308 8.2E-19 T 28-03-2018 AL549_RS08770 9a586b4ca2fc27739f28b1d629d3e79c 315 SMART SM00354 4 74 2.0E-29 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS18320 d246840838ef96dfae996ec611f05f85 416 SUPERFAMILY SSF52540 166 402 4.76E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18320 d246840838ef96dfae996ec611f05f85 416 Gene3D G3DSA:3.40.50.300 162 402 2.7E-27 T 28-03-2018 AL549_RS10620 838838c1d1bb57d76686ea6ccf3b8753 173 SUPERFAMILY SSF52833 43 169 7.83E-29 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS10620 838838c1d1bb57d76686ea6ccf3b8753 173 Pfam PF08534 Redoxin 53 160 2.0E-10 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL549_RS10620 838838c1d1bb57d76686ea6ccf3b8753 173 Gene3D G3DSA:3.40.30.10 26 173 1.6E-20 T 28-03-2018 AL549_RS10620 838838c1d1bb57d76686ea6ccf3b8753 173 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 36 169 3.4E-41 T 28-03-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AL549_RS02170 d09ee7713c9638f5ab35fea1d2f1d3ca 603 Pfam PF02743 Cache domain 43 215 3.5E-14 T 28-03-2018 IPR033479 Double Cache domain 1 AL549_RS02170 d09ee7713c9638f5ab35fea1d2f1d3ca 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 571 4.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS02170 d09ee7713c9638f5ab35fea1d2f1d3ca 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 552 4.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS02170 d09ee7713c9638f5ab35fea1d2f1d3ca 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 590 4.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS02170 d09ee7713c9638f5ab35fea1d2f1d3ca 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 4.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS02170 d09ee7713c9638f5ab35fea1d2f1d3ca 603 SUPERFAMILY SSF103190 54 184 6.67E-21 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL549_RS02170 d09ee7713c9638f5ab35fea1d2f1d3ca 603 SUPERFAMILY SSF47384 358 439 2.75E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS02170 d09ee7713c9638f5ab35fea1d2f1d3ca 603 Gene3D G3DSA:3.30.450.20 163 284 3.1E-7 T 28-03-2018 AL549_RS02170 d09ee7713c9638f5ab35fea1d2f1d3ca 603 PIRSF PIRSF036431 2 600 3.7E-175 T 28-03-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AL549_RS02170 d09ee7713c9638f5ab35fea1d2f1d3ca 603 SMART SM00388 373 441 0.002 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS02170 d09ee7713c9638f5ab35fea1d2f1d3ca 603 Gene3D G3DSA:3.30.450.20 59 162 2.9E-18 T 28-03-2018 AL549_RS02170 d09ee7713c9638f5ab35fea1d2f1d3ca 603 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 488 590 1.5E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS02170 d09ee7713c9638f5ab35fea1d2f1d3ca 603 SMART SM00387 485 593 1.0E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS02170 d09ee7713c9638f5ab35fea1d2f1d3ca 603 Gene3D G3DSA:1.10.287.130 334 456 9.4E-4 T 28-03-2018 AL549_RS02170 d09ee7713c9638f5ab35fea1d2f1d3ca 603 SUPERFAMILY SSF55874 443 594 2.88E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS02170 d09ee7713c9638f5ab35fea1d2f1d3ca 603 Gene3D G3DSA:3.30.565.10 457 603 9.7E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS03790 76ad93814f9b56bd608868ca33a575e8 476 SUPERFAMILY SSF100950 63 87 6.7E-39 T 28-03-2018 AL549_RS03790 76ad93814f9b56bd608868ca33a575e8 476 SUPERFAMILY SSF100950 133 294 6.7E-39 T 28-03-2018 AL549_RS03790 76ad93814f9b56bd608868ca33a575e8 476 Pfam PF11870 Domain of unknown function (DUF3390) 384 471 5.7E-28 T 28-03-2018 IPR024569 4Fe-4S binding protein, C-terminal AL549_RS03790 76ad93814f9b56bd608868ca33a575e8 476 SUPERFAMILY SSF46548 285 388 5.58E-16 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL549_RS03790 76ad93814f9b56bd608868ca33a575e8 476 Gene3D G3DSA:3.30.70.20 320 366 6.8E-5 T 28-03-2018 AL549_RS03790 76ad93814f9b56bd608868ca33a575e8 476 Gene3D G3DSA:1.10.1060.10 367 407 0.02 T 28-03-2018 AL549_RS03790 76ad93814f9b56bd608868ca33a575e8 476 Pfam PF13183 4Fe-4S dicluster domain 310 376 2.6E-9 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS03790 76ad93814f9b56bd608868ca33a575e8 476 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 312 323 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS03790 76ad93814f9b56bd608868ca33a575e8 476 Pfam PF02589 LUD domain 68 293 2.2E-52 T 28-03-2018 IPR003741 LUD domain AL549_RS03790 76ad93814f9b56bd608868ca33a575e8 476 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 17 454 9.5E-149 T 28-03-2018 IPR004452 4Fe-4S binding protein GO:0019516 AL549_RS03790 76ad93814f9b56bd608868ca33a575e8 476 Gene3D G3DSA:3.30.70.20 290 319 0.0019 T 28-03-2018 AL549_RS03790 76ad93814f9b56bd608868ca33a575e8 476 Gene3D G3DSA:3.40.50.10420 63 130 1.2E-6 T 28-03-2018 AL549_RS03790 76ad93814f9b56bd608868ca33a575e8 476 Gene3D G3DSA:3.40.50.10420 131 289 2.1E-43 T 28-03-2018 AL549_RS10840 84361339b5b8d15a8be4c0eec922102b 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-18 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS10840 84361339b5b8d15a8be4c0eec922102b 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-18 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS10840 84361339b5b8d15a8be4c0eec922102b 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-18 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS10840 84361339b5b8d15a8be4c0eec922102b 93 Gene3D G3DSA:4.10.520.10 1 92 6.6E-32 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL549_RS10840 84361339b5b8d15a8be4c0eec922102b 93 SMART SM00411 1 91 5.8E-43 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS10840 84361339b5b8d15a8be4c0eec922102b 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 30.501 T 28-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AL549_RS10840 84361339b5b8d15a8be4c0eec922102b 93 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 4.3E-49 T 28-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AL549_RS10840 84361339b5b8d15a8be4c0eec922102b 93 SUPERFAMILY SSF47729 1 91 4.12E-30 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL549_RS10840 84361339b5b8d15a8be4c0eec922102b 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AL549_RS10840 84361339b5b8d15a8be4c0eec922102b 93 Pfam PF00216 Bacterial DNA-binding protein 1 91 9.0E-31 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS07020 7ac056cf8fac5ef604ae18c42c561dc0 292 SUPERFAMILY SSF53850 92 291 2.35E-28 T 28-03-2018 AL549_RS07020 7ac056cf8fac5ef604ae18c42c561dc0 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 6.9E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS07020 7ac056cf8fac5ef604ae18c42c561dc0 292 Pfam PF03466 LysR substrate binding domain 90 287 1.8E-27 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS07020 7ac056cf8fac5ef604ae18c42c561dc0 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS07020 7ac056cf8fac5ef604ae18c42c561dc0 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS07020 7ac056cf8fac5ef604ae18c42c561dc0 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS07020 7ac056cf8fac5ef604ae18c42c561dc0 292 Gene3D G3DSA:3.40.190.10 93 175 5.0E-10 T 28-03-2018 AL549_RS07020 7ac056cf8fac5ef604ae18c42c561dc0 292 Gene3D G3DSA:1.10.10.10 3 87 2.4E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS07020 7ac056cf8fac5ef604ae18c42c561dc0 292 Gene3D G3DSA:3.40.190.10 176 261 1.8E-17 T 28-03-2018 AL549_RS07020 7ac056cf8fac5ef604ae18c42c561dc0 292 SUPERFAMILY SSF46785 3 83 1.09E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS16025 807fe0667d6a2b6573c2cbe76904af2e 571 Gene3D G3DSA:3.40.50.2300 451 570 1.6E-35 T 28-03-2018 AL549_RS16025 807fe0667d6a2b6573c2cbe76904af2e 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 3.0E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS16025 807fe0667d6a2b6573c2cbe76904af2e 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 3.0E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS16025 807fe0667d6a2b6573c2cbe76904af2e 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 3.0E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS16025 807fe0667d6a2b6573c2cbe76904af2e 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 3.0E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS16025 807fe0667d6a2b6573c2cbe76904af2e 571 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 429 3.8E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS16025 807fe0667d6a2b6573c2cbe76904af2e 571 SUPERFAMILY SSF52172 453 568 1.2E-32 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS16025 807fe0667d6a2b6573c2cbe76904af2e 571 Gene3D G3DSA:1.10.287.130 197 268 4.1E-19 T 28-03-2018 AL549_RS16025 807fe0667d6a2b6573c2cbe76904af2e 571 SMART SM00388 207 272 5.5E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS16025 807fe0667d6a2b6573c2cbe76904af2e 571 Pfam PF00072 Response regulator receiver domain 455 560 2.1E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS16025 807fe0667d6a2b6573c2cbe76904af2e 571 Gene3D G3DSA:3.30.565.10 278 436 1.6E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS16025 807fe0667d6a2b6573c2cbe76904af2e 571 SUPERFAMILY SSF47384 195 272 1.41E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS16025 807fe0667d6a2b6573c2cbe76904af2e 571 SMART SM00387 319 430 1.6E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS16025 807fe0667d6a2b6573c2cbe76904af2e 571 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 272 3.9E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS16025 807fe0667d6a2b6573c2cbe76904af2e 571 SMART SM00448 453 564 3.9E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS16025 807fe0667d6a2b6573c2cbe76904af2e 571 SUPERFAMILY SSF55874 261 431 1.19E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS08365 e27a003404963d0d25b444672f796ab8 325 SUPERFAMILY SSF81324 230 325 4.32E-16 T 28-03-2018 AL549_RS08365 e27a003404963d0d25b444672f796ab8 325 Gene3D G3DSA:1.10.287.70 200 325 9.1E-16 T 28-03-2018 AL549_RS08365 e27a003404963d0d25b444672f796ab8 325 Pfam PF00805 Pentapeptide repeats (8 copies) 90 127 5.1E-8 T 28-03-2018 IPR001646 Pentapeptide repeat AL549_RS08365 e27a003404963d0d25b444672f796ab8 325 Pfam PF07885 Ion channel 237 324 1.7E-15 T 28-03-2018 IPR013099 Potassium channel domain AL549_RS08365 e27a003404963d0d25b444672f796ab8 325 Gene3D G3DSA:3.30.1120.50 101 145 4.4E-11 T 28-03-2018 AL549_RS08365 e27a003404963d0d25b444672f796ab8 325 Gene3D G3DSA:3.30.1120.50 56 100 4.8E-5 T 28-03-2018 AL549_RS08365 e27a003404963d0d25b444672f796ab8 325 SUPERFAMILY SSF141571 58 138 4.97E-14 T 28-03-2018 AL549_RS15280 c4e7e455b1d8321cb80b76c67ce09a21 74 Pfam PF11665 Protein of unknown function (DUF3265) 23 50 1.7E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS22850 6add7b50fa5411c18d921bcaa83ced88 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.4E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS22850 6add7b50fa5411c18d921bcaa83ced88 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.4E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS22850 6add7b50fa5411c18d921bcaa83ced88 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 1.4E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS22850 6add7b50fa5411c18d921bcaa83ced88 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.4E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS22850 6add7b50fa5411c18d921bcaa83ced88 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 1.4E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS22850 6add7b50fa5411c18d921bcaa83ced88 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 255 1.3E-27 T 28-03-2018 AL549_RS22850 6add7b50fa5411c18d921bcaa83ced88 256 SUPERFAMILY SSF51735 6 256 1.59E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS22850 6add7b50fa5411c18d921bcaa83ced88 256 Gene3D G3DSA:3.40.50.720 1 256 4.1E-37 T 28-03-2018 AL549_RS20835 905ec168eabc2ba82bd0c24765936e23 149 Pfam PF01220 Dehydroquinase class II 6 142 2.6E-61 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL549_RS20835 905ec168eabc2ba82bd0c24765936e23 149 SUPERFAMILY SSF52304 4 145 6.41E-62 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL549_RS20835 905ec168eabc2ba82bd0c24765936e23 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 144 9.5E-64 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL549_RS20835 905ec168eabc2ba82bd0c24765936e23 149 Gene3D G3DSA:3.40.50.9100 2 149 7.7E-68 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL549_RS20835 905ec168eabc2ba82bd0c24765936e23 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 7 149 5.0E-78 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL549_RS20835 905ec168eabc2ba82bd0c24765936e23 149 PIRSF PIRSF001399 3 149 1.2E-58 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL549_RS20835 905ec168eabc2ba82bd0c24765936e23 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 28-03-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL549_RS20835 905ec168eabc2ba82bd0c24765936e23 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 75.447 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL549_RS00100 e805b93fcbbb52c1c7f191b6222c3610 371 Pfam PF08402 TOBE domain 281 353 9.6E-11 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL549_RS00100 e805b93fcbbb52c1c7f191b6222c3610 371 Pfam PF00005 ABC transporter 20 161 1.6E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS00100 e805b93fcbbb52c1c7f191b6222c3610 371 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS00100 e805b93fcbbb52c1c7f191b6222c3610 371 SUPERFAMILY SSF52540 4 243 3.51E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS00100 e805b93fcbbb52c1c7f191b6222c3610 371 Gene3D G3DSA:2.40.50.100 242 293 5.1E-9 T 28-03-2018 AL549_RS00100 e805b93fcbbb52c1c7f191b6222c3610 371 SUPERFAMILY SSF50331 236 361 2.92E-31 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL549_RS00100 e805b93fcbbb52c1c7f191b6222c3610 371 Gene3D G3DSA:3.40.50.300 1 241 2.1E-70 T 28-03-2018 AL549_RS00100 e805b93fcbbb52c1c7f191b6222c3610 371 Gene3D G3DSA:2.40.50.140 294 345 2.1E-13 T 28-03-2018 AL549_RS00100 e805b93fcbbb52c1c7f191b6222c3610 371 SMART SM00382 28 211 8.0E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 7 639 43.419 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 TIGRFAM TIGR01273 speA: arginine decarboxylase 11 638 1.3E-270 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 SUPERFAMILY SSF51419 70 352 1.54E-64 T 28-03-2018 IPR029066 PLP-binding barrel AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 PIRSF PIRSF001336 2 640 5.7E-257 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01180 Arginine decarboxylase signature 94 108 2.3E-63 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01180 Arginine decarboxylase signature 70 85 2.3E-63 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01180 Arginine decarboxylase signature 471 492 2.3E-63 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01180 Arginine decarboxylase signature 496 521 2.3E-63 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01180 Arginine decarboxylase signature 330 347 2.3E-63 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01180 Arginine decarboxylase signature 153 168 2.3E-63 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01180 Arginine decarboxylase signature 203 225 2.3E-63 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01180 Arginine decarboxylase signature 179 200 2.3E-63 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01180 Arginine decarboxylase signature 549 570 2.3E-63 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 80 350 1.1E-51 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 340 359 1.0E-12 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 549 562 1.0E-12 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 246 259 1.0E-12 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 102 120 1.0E-12 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 Gene3D G3DSA:2.40.37.10 394 587 8.2E-63 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 Gene3D G3DSA:2.40.37.10 1 82 1.4E-15 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL549_RS15540 de6d9e19d766d65a414064b5ed3cbb1f 640 Gene3D G3DSA:3.20.20.10 83 352 1.1E-40 T 28-03-2018 IPR029066 PLP-binding barrel AL549_RS16265 ee7530bf512d615903a1b8720968d539 820 Gene3D G3DSA:3.10.580.10 678 820 3.5E-10 T 28-03-2018 AL549_RS16265 ee7530bf512d615903a1b8720968d539 820 SMART SM00091 129 195 1.8E-7 T 28-03-2018 IPR000014 PAS domain AL549_RS16265 ee7530bf512d615903a1b8720968d539 820 SUPERFAMILY SSF55785 126 238 1.05E-17 T 28-03-2018 IPR000014 PAS domain AL549_RS16265 ee7530bf512d615903a1b8720968d539 820 SUPERFAMILY SSF141868 422 662 7.06E-65 T 28-03-2018 IPR001633 EAL domain AL549_RS16265 ee7530bf512d615903a1b8720968d539 820 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 241 2.1E-12 T 28-03-2018 IPR000014 PAS domain AL549_RS16265 ee7530bf512d615903a1b8720968d539 820 Gene3D G3DSA:3.30.450.20 124 266 5.3E-16 T 28-03-2018 AL549_RS16265 ee7530bf512d615903a1b8720968d539 820 SMART SM00052 416 663 1.1E-67 T 28-03-2018 IPR001633 EAL domain AL549_RS16265 ee7530bf512d615903a1b8720968d539 820 SUPERFAMILY SSF54631 687 817 1.26E-12 T 28-03-2018 AL549_RS16265 ee7530bf512d615903a1b8720968d539 820 Gene3D G3DSA:3.20.20.450 414 664 3.3E-72 T 28-03-2018 IPR001633 EAL domain AL549_RS16265 ee7530bf512d615903a1b8720968d539 820 Gene3D G3DSA:3.30.70.270 267 413 1.1E-8 T 28-03-2018 AL549_RS16265 ee7530bf512d615903a1b8720968d539 820 Pfam PF13426 PAS domain 140 239 4.1E-8 T 28-03-2018 IPR000014 PAS domain AL549_RS16265 ee7530bf512d615903a1b8720968d539 820 Pfam PF00563 EAL domain 426 658 1.3E-59 T 28-03-2018 IPR001633 EAL domain AL549_RS11705 5ef7d3d0bf7bd9c1c14c7282b3c8511f 188 SUPERFAMILY SSF52540 11 183 2.15E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11705 5ef7d3d0bf7bd9c1c14c7282b3c8511f 188 PIRSF PIRSF006135 8 185 7.6E-55 T 28-03-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL549_RS11705 5ef7d3d0bf7bd9c1c14c7282b3c8511f 188 Gene3D G3DSA:3.40.50.300 10 183 6.0E-61 T 28-03-2018 AL549_RS11705 5ef7d3d0bf7bd9c1c14c7282b3c8511f 188 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 11 182 6.1E-62 T 28-03-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL549_RS11005 5549cd5f41806c96e87e137da408b16b 350 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 3.5E-126 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL549_RS11005 5549cd5f41806c96e87e137da408b16b 350 SMART SM00729 43 255 3.3E-41 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL549_RS11005 5549cd5f41806c96e87e137da408b16b 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 6.4E-21 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL549_RS11005 5549cd5f41806c96e87e137da408b16b 350 SUPERFAMILY SSF102114 5 310 5.89E-89 T 28-03-2018 AL549_RS11005 5549cd5f41806c96e87e137da408b16b 350 PIRSF PIRSF001619 1 319 2.9E-139 T 28-03-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL549_RS11005 5549cd5f41806c96e87e137da408b16b 350 Pfam PF04055 Radical SAM superfamily 50 199 2.8E-15 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS11005 5549cd5f41806c96e87e137da408b16b 350 SMART SM00876 220 312 5.6E-46 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL549_RS11005 5549cd5f41806c96e87e137da408b16b 350 Gene3D G3DSA:3.20.20.70 4 315 4.2E-58 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS11005 5549cd5f41806c96e87e137da408b16b 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.983 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL549_RS02075 2b3e40c860d195d1e1392d41a6758d84 204 SMART SM00855 3 157 7.4E-19 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL549_RS02075 2b3e40c860d195d1e1392d41a6758d84 204 Gene3D G3DSA:3.40.50.1240 1 198 8.7E-43 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AL549_RS02075 2b3e40c860d195d1e1392d41a6758d84 204 SUPERFAMILY SSF53254 2 183 8.12E-46 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AL549_RS02075 2b3e40c860d195d1e1392d41a6758d84 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 176 1.3E-38 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL549_RS02075 2b3e40c860d195d1e1392d41a6758d84 204 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 AL549_RS02075 2b3e40c860d195d1e1392d41a6758d84 204 PIRSF PIRSF000709 1 196 1.6E-11 T 28-03-2018 AL549_RS03825 8d59ba52aab207a3a7578a092aeb9b56 786 Pfam PF13654 AAA domain 25 539 1.5E-184 T 28-03-2018 AL549_RS03825 8d59ba52aab207a3a7578a092aeb9b56 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 1.2E-6 T 28-03-2018 AL549_RS03825 8d59ba52aab207a3a7578a092aeb9b56 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 1.2E-6 T 28-03-2018 AL549_RS03825 8d59ba52aab207a3a7578a092aeb9b56 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 1.2E-6 T 28-03-2018 AL549_RS03825 8d59ba52aab207a3a7578a092aeb9b56 786 SUPERFAMILY SSF54211 564 756 2.24E-35 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS03825 8d59ba52aab207a3a7578a092aeb9b56 786 Gene3D G3DSA:3.40.50.300 12 366 1.4E-5 T 28-03-2018 AL549_RS03825 8d59ba52aab207a3a7578a092aeb9b56 786 SUPERFAMILY SSF52540 331 538 2.47E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS03825 8d59ba52aab207a3a7578a092aeb9b56 786 SUPERFAMILY SSF52540 30 104 2.47E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS03825 8d59ba52aab207a3a7578a092aeb9b56 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 751 1.2E-9 T 28-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AL549_RS03825 8d59ba52aab207a3a7578a092aeb9b56 786 Gene3D G3DSA:3.30.230.10 543 773 4.2E-28 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL549_RS14675 d55ff923154d32cb7cdfba593c78ffd5 179 SUPERFAMILY SSF52540 129 156 4.04E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS14675 d55ff923154d32cb7cdfba593c78ffd5 179 SUPERFAMILY SSF52540 3 101 4.04E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS14675 d55ff923154d32cb7cdfba593c78ffd5 179 Gene3D G3DSA:3.40.50.300 2 166 2.7E-15 T 28-03-2018 AL549_RS14675 d55ff923154d32cb7cdfba593c78ffd5 179 Pfam PF01202 Shikimate kinase 12 39 1.7E-4 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL549_RS07885 8443436d5a92da9e48f5475b815c0ee0 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 19.636 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL549_RS07885 8443436d5a92da9e48f5475b815c0ee0 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 512 9.8E-134 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL549_RS07885 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 166 187 7.1E-76 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL549_RS07885 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 54 70 7.1E-76 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL549_RS07885 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 35 54 7.1E-76 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL549_RS07885 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 268 294 7.1E-76 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL549_RS07885 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 418 435 7.1E-76 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL549_RS07885 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 142 166 7.1E-76 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL549_RS07885 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 366 385 7.1E-76 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL549_RS07885 8443436d5a92da9e48f5475b815c0ee0 520 PIRSF PIRSF002869 1 518 2.9E-151 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL549_RS07885 8443436d5a92da9e48f5475b815c0ee0 520 Pfam PF03023 MviN-like protein 30 475 6.8E-141 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL549_RS16510 df6b0a6b0c55bf068f2063a98ac348d7 245 SUPERFAMILY SSF53335 23 245 1.55E-40 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS16510 df6b0a6b0c55bf068f2063a98ac348d7 245 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 6 245 43.163 T 28-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AL549_RS16510 df6b0a6b0c55bf068f2063a98ac348d7 245 Pfam PF13649 Methyltransferase domain 63 161 2.1E-13 T 28-03-2018 AL549_RS16510 df6b0a6b0c55bf068f2063a98ac348d7 245 PIRSF PIRSF006325 4 245 1.6E-124 T 28-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AL549_RS16510 df6b0a6b0c55bf068f2063a98ac348d7 245 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 8 245 4.4E-117 T 28-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AL549_RS16510 df6b0a6b0c55bf068f2063a98ac348d7 245 Gene3D G3DSA:3.40.50.150 21 245 1.5E-40 T 28-03-2018 AL549_RS08150 562663053e573a526ae505a5c6f10244 202 Pfam PF00578 AhpC/TSA family 4 139 5.4E-34 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL549_RS08150 562663053e573a526ae505a5c6f10244 202 Gene3D G3DSA:3.40.30.10 3 161 6.1E-41 T 28-03-2018 AL549_RS08150 562663053e573a526ae505a5c6f10244 202 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 3.1E-8 T 28-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL549_RS08150 562663053e573a526ae505a5c6f10244 202 SUPERFAMILY SSF52833 1 194 9.84E-68 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS08150 562663053e573a526ae505a5c6f10244 202 Gene3D G3DSA:3.30.1020.10 162 199 8.9E-13 T 28-03-2018 AL549_RS08150 562663053e573a526ae505a5c6f10244 202 PIRSF PIRSF000239 1 201 4.4E-61 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL549_RS08180 5fac79e7407e36db7e3d9df0c647dc02 350 SUPERFAMILY SSF111337 1 345 8.5E-138 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL549_RS08180 5fac79e7407e36db7e3d9df0c647dc02 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 5.7E-133 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL549_RS08180 5fac79e7407e36db7e3d9df0c647dc02 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 2.7E-158 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL549_RS08180 5fac79e7407e36db7e3d9df0c647dc02 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.083 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL549_RS08180 5fac79e7407e36db7e3d9df0c647dc02 350 Gene3D G3DSA:3.40.1780.10 1 147 3.9E-29 T 28-03-2018 AL549_RS08180 5fac79e7407e36db7e3d9df0c647dc02 350 Gene3D G3DSA:3.40.1780.10 175 345 1.1E-66 T 28-03-2018 AL549_RS20200 9b66fa693d833bdc7ac0f7b5e575e33b 734 Gene3D G3DSA:3.40.50.300 400 631 3.7E-25 T 28-03-2018 AL549_RS20200 9b66fa693d833bdc7ac0f7b5e575e33b 734 TIGRFAM TIGR00595 priA: primosomal protein N' 222 730 9.7E-191 T 28-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AL549_RS20200 9b66fa693d833bdc7ac0f7b5e575e33b 734 SMART SM00487 197 396 2.9E-17 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS20200 9b66fa693d833bdc7ac0f7b5e575e33b 734 SMART SM00490 493 590 6.5E-13 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS20200 9b66fa693d833bdc7ac0f7b5e575e33b 734 SUPERFAMILY SSF52540 462 633 1.15E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20200 9b66fa693d833bdc7ac0f7b5e575e33b 734 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 733 25.184 T 28-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AL549_RS20200 9b66fa693d833bdc7ac0f7b5e575e33b 734 Pfam PF00271 Helicase conserved C-terminal domain 514 589 5.9E-8 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS20200 9b66fa693d833bdc7ac0f7b5e575e33b 734 Pfam PF00270 DEAD/DEAH box helicase 205 364 8.5E-15 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL549_RS20200 9b66fa693d833bdc7ac0f7b5e575e33b 734 Gene3D G3DSA:3.40.50.300 119 392 1.7E-27 T 28-03-2018 AL549_RS20200 9b66fa693d833bdc7ac0f7b5e575e33b 734 SUPERFAMILY SSF52540 79 131 7.23E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20200 9b66fa693d833bdc7ac0f7b5e575e33b 734 SUPERFAMILY SSF52540 198 380 7.23E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS10670 ca1e1e88f53119f6a4948aeb1bc4cd72 519 SUPERFAMILY SSF52091 416 498 5.1E-11 T 28-03-2018 IPR002645 STAS domain AL549_RS10670 ca1e1e88f53119f6a4948aeb1bc4cd72 519 Gene3D G3DSA:3.30.750.24 406 499 2.1E-13 T 28-03-2018 IPR002645 STAS domain AL549_RS10670 ca1e1e88f53119f6a4948aeb1bc4cd72 519 Pfam PF00916 Sulfate permease family 13 374 1.6E-57 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AL549_RS10670 ca1e1e88f53119f6a4948aeb1bc4cd72 519 Pfam PF01740 STAS domain 417 503 1.1E-5 T 28-03-2018 IPR002645 STAS domain AL549_RS09685 9f0ac48f6e7f74f769d7439c0f1339f8 769 Gene3D G3DSA:1.20.1640.10 195 399 2.4E-19 T 28-03-2018 AL549_RS09685 9f0ac48f6e7f74f769d7439c0f1339f8 769 SUPERFAMILY SSF82866 637 763 1.31E-21 T 28-03-2018 AL549_RS09685 9f0ac48f6e7f74f769d7439c0f1339f8 769 Pfam PF03176 MMPL family 195 399 4.6E-15 T 28-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AL549_RS09685 9f0ac48f6e7f74f769d7439c0f1339f8 769 SUPERFAMILY SSF82866 192 398 1.44E-18 T 28-03-2018 AL549_RS09685 9f0ac48f6e7f74f769d7439c0f1339f8 769 Gene3D G3DSA:1.20.1640.10 585 764 8.6E-21 T 28-03-2018 AL549_RS05945 bfec503d5a93843563a90dcee5c01515 282 Pfam PF00563 EAL domain 43 267 3.9E-48 T 28-03-2018 IPR001633 EAL domain AL549_RS05945 bfec503d5a93843563a90dcee5c01515 282 SUPERFAMILY SSF141868 45 275 1.24E-40 T 28-03-2018 IPR001633 EAL domain AL549_RS05945 bfec503d5a93843563a90dcee5c01515 282 Gene3D G3DSA:3.20.20.450 35 276 1.5E-39 T 28-03-2018 IPR001633 EAL domain AL549_RS05945 bfec503d5a93843563a90dcee5c01515 282 SMART SM00052 35 272 1.5E-10 T 28-03-2018 IPR001633 EAL domain AL549_RS14480 6d142b08b07567afa7c6e130f8e75e55 169 Gene3D G3DSA:1.25.40.10 45 169 1.1E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS14480 6d142b08b07567afa7c6e130f8e75e55 169 SUPERFAMILY SSF48452 74 150 2.66E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 Pfam PF05192 MutS domain III 269 558 3.4E-40 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 851 0.0 T 28-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 Gene3D G3DSA:3.30.420.110 132 262 2.2E-27 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 SUPERFAMILY SSF55271 5 113 2.09E-42 T 28-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 Pfam PF00488 MutS domain V 609 796 5.9E-87 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 PIRSF PIRSF037677 2 181 2.4E-27 T 28-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 PIRSF PIRSF037677 190 832 1.8E-130 T 28-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 Gene3D G3DSA:3.40.1170.10 1 131 1.3E-46 T 28-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 SMART SM00534 606 793 7.8E-119 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 SMART SM00533 283 590 9.0E-105 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 Gene3D G3DSA:1.10.1420.10 263 406 1.0E-39 T 28-03-2018 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 Gene3D G3DSA:3.40.50.300 566 817 2.7E-42 T 28-03-2018 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 SUPERFAMILY SSF48334 267 564 1.96E-89 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 845 25.23 T 28-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 Gene3D G3DSA:1.10.1420.10 407 534 1.4E-31 T 28-03-2018 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 SUPERFAMILY SSF53150 114 266 1.22E-40 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 Pfam PF01624 MutS domain I 8 119 1.7E-41 T 28-03-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 Pfam PF05190 MutS family domain IV 427 517 7.9E-29 T 28-03-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 SUPERFAMILY SSF52540 566 796 3.85E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS19090 554068025c71f35ceafcc63aa4b3d07d 853 Pfam PF05188 MutS domain II 128 253 4.2E-31 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 Gene3D G3DSA:3.30.420.40 1 191 1.2E-79 T 28-03-2018 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 SUPERFAMILY SSF53067 1 182 2.49E-66 T 28-03-2018 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 631 36.362 T 28-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 Pfam PF00012 Hsp70 protein 4 601 1.8E-264 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 Gene3D G3DSA:3.30.420.40 274 361 1.8E-19 T 28-03-2018 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 SUPERFAMILY SSF53067 186 381 9.72E-66 T 28-03-2018 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 31 43 7.3E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 53 61 7.3E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 197 207 7.3E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 387 406 7.3E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 364 384 7.3E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 3 16 7.3E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 137 157 7.3E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 333 349 7.3E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 468 484 7.3E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 Gene3D G3DSA:1.20.1270.10 532 618 7.0E-19 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 SUPERFAMILY SSF100920 383 539 4.71E-60 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 3.8E-286 T 28-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 Gene3D G3DSA:2.60.34.10 389 531 2.0E-63 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 Gene3D G3DSA:3.30.420.40 192 273 1.9E-23 T 28-03-2018 AL549_RS08490 db9f022f21899a17e8c4f2470e501071 636 SUPERFAMILY SSF100934 534 607 3.88E-6 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AL549_RS03735 dc209e7541af6d9a903a70d472b52a2a 236 SUPERFAMILY SSF56281 10 202 1.68E-28 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS03735 dc209e7541af6d9a903a70d472b52a2a 236 Gene3D G3DSA:3.60.15.10 4 225 3.1E-20 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS03735 dc209e7541af6d9a903a70d472b52a2a 236 SMART SM00849 15 197 4.8E-16 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS03735 dc209e7541af6d9a903a70d472b52a2a 236 Pfam PF00753 Metallo-beta-lactamase superfamily 15 163 2.1E-7 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS05285 b509039330faef8e7b0b7c2aaef2c381 321 Gene3D G3DSA:3.40.1030.10 75 312 2.8E-32 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS05285 b509039330faef8e7b0b7c2aaef2c381 321 Gene3D G3DSA:1.20.970.10 5 74 1.8E-16 T 28-03-2018 AL549_RS05285 b509039330faef8e7b0b7c2aaef2c381 321 SUPERFAMILY SSF47648 8 71 2.09E-15 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS05285 b509039330faef8e7b0b7c2aaef2c381 321 SUPERFAMILY SSF52418 72 314 2.35E-41 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS05285 b509039330faef8e7b0b7c2aaef2c381 321 Pfam PF02885 Glycosyl transferase family, helical bundle domain 10 67 8.5E-13 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS18150 777220183acd5e9f933d2b992e79d796 298 Gene3D G3DSA:1.10.10.10 1 86 3.7E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS18150 777220183acd5e9f933d2b992e79d796 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS18150 777220183acd5e9f933d2b992e79d796 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS18150 777220183acd5e9f933d2b992e79d796 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS18150 777220183acd5e9f933d2b992e79d796 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.2E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS18150 777220183acd5e9f933d2b992e79d796 298 Pfam PF03466 LysR substrate binding domain 92 293 3.0E-47 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS18150 777220183acd5e9f933d2b992e79d796 298 SUPERFAMILY SSF53850 92 296 1.01E-41 T 28-03-2018 AL549_RS18150 777220183acd5e9f933d2b992e79d796 298 Gene3D G3DSA:3.40.190.10 91 178 4.8E-19 T 28-03-2018 AL549_RS18150 777220183acd5e9f933d2b992e79d796 298 Gene3D G3DSA:3.40.190.10 179 269 8.9E-19 T 28-03-2018 AL549_RS18150 777220183acd5e9f933d2b992e79d796 298 SUPERFAMILY SSF46785 5 113 2.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS07940 f8af8420e65cac869c7da7591ecce79d 598 Gene3D G3DSA:3.40.50.720 395 501 1.8E-5 T 28-03-2018 AL549_RS07940 f8af8420e65cac869c7da7591ecce79d 598 Pfam PF02254 TrkA-N domain 399 491 2.1E-7 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL549_RS07940 f8af8420e65cac869c7da7591ecce79d 598 SUPERFAMILY SSF51735 399 493 1.58E-9 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS07940 f8af8420e65cac869c7da7591ecce79d 598 Pfam PF00999 Sodium/hydrogen exchanger family 18 386 5.2E-34 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL549_RS11730 e47443957efa7cef4f780089fdccebc5 254 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 254 42.75 T 28-03-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 AL549_RS11730 e47443957efa7cef4f780089fdccebc5 254 Gene3D G3DSA:3.40.50.300 10 242 2.9E-43 T 28-03-2018 AL549_RS11730 e47443957efa7cef4f780089fdccebc5 254 Pfam PF00005 ABC transporter 14 167 6.0E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS11730 e47443957efa7cef4f780089fdccebc5 254 SMART SM00382 21 216 1.8E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS11730 e47443957efa7cef4f780089fdccebc5 254 SUPERFAMILY SSF52540 15 228 8.63E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16465 3cd22e08fd674eb53e4dbf06352a574e 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.1E-20 T 28-03-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 AL549_RS16465 3cd22e08fd674eb53e4dbf06352a574e 35 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.3E-17 T 28-03-2018 IPR012994 Membrane bound YbgT-like AL549_RS07205 f9e63c76fa7979492f783266fbdd3e30 211 SUPERFAMILY SSF103473 10 197 2.35E-7 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS07205 f9e63c76fa7979492f783266fbdd3e30 211 Gene3D G3DSA:1.20.1250.20 5 201 2.3E-4 T 28-03-2018 AL549_RS00120 92eb2153f75e3af445a7bc7699248824 739 Pfam PF13807 G-rich domain on putative tyrosine kinase 409 480 1.4E-7 T 28-03-2018 IPR032807 Tyrosine kinase, G-rich domain AL549_RS00120 92eb2153f75e3af445a7bc7699248824 739 SUPERFAMILY SSF52540 552 728 8.86E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS00120 92eb2153f75e3af445a7bc7699248824 739 Pfam PF02706 Chain length determinant protein 34 119 9.0E-10 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AL549_RS00120 92eb2153f75e3af445a7bc7699248824 739 Gene3D G3DSA:3.30.1890.10 59 458 4.3E-28 T 28-03-2018 AL549_RS00120 92eb2153f75e3af445a7bc7699248824 739 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 535 735 2.1E-42 T 28-03-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AL549_RS00120 92eb2153f75e3af445a7bc7699248824 739 Pfam PF13614 AAA domain 565 682 1.4E-10 T 28-03-2018 IPR025669 AAA domain AL549_RS00120 92eb2153f75e3af445a7bc7699248824 739 Gene3D G3DSA:3.40.50.300 527 738 8.9E-34 T 28-03-2018 AL549_RS17490 dec762cf55b86d71af780a4ec6a6832b 471 SUPERFAMILY SSF52172 3 173 5.55E-40 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS17490 dec762cf55b86d71af780a4ec6a6832b 471 SMART SM00448 4 115 3.6E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS17490 dec762cf55b86d71af780a4ec6a6832b 471 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL549_RS17490 dec762cf55b86d71af780a4ec6a6832b 471 SUPERFAMILY SSF46689 412 462 6.27E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS17490 dec762cf55b86d71af780a4ec6a6832b 471 SUPERFAMILY SSF46689 342 385 6.27E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS17490 dec762cf55b86d71af780a4ec6a6832b 471 Gene3D G3DSA:3.40.50.2300 1 129 2.8E-33 T 28-03-2018 AL549_RS17490 dec762cf55b86d71af780a4ec6a6832b 471 Pfam PF00072 Response regulator receiver domain 6 115 1.3E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS17490 dec762cf55b86d71af780a4ec6a6832b 471 Pfam PF00158 Sigma-54 interaction domain 134 295 5.9E-65 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL549_RS17490 dec762cf55b86d71af780a4ec6a6832b 471 Gene3D G3DSA:3.40.50.300 130 300 2.1E-28 T 28-03-2018 AL549_RS17490 dec762cf55b86d71af780a4ec6a6832b 471 Gene3D G3DSA:1.10.10.60 380 463 1.4E-11 T 28-03-2018 AL549_RS17490 dec762cf55b86d71af780a4ec6a6832b 471 Pfam PF02954 Bacterial regulatory protein, Fis family 422 461 3.4E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS17490 dec762cf55b86d71af780a4ec6a6832b 471 SUPERFAMILY SSF52540 135 370 4.83E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS17490 dec762cf55b86d71af780a4ec6a6832b 471 Gene3D G3DSA:1.10.8.60 301 379 4.6E-25 T 28-03-2018 AL549_RS17490 dec762cf55b86d71af780a4ec6a6832b 471 SMART SM00382 149 296 2.0E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS17490 dec762cf55b86d71af780a4ec6a6832b 471 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL549_RS20630 10f5ffd3b985c536652d967408ce9ae2 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.6E-9 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS20630 10f5ffd3b985c536652d967408ce9ae2 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 1.7E-37 T 28-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AL549_RS20630 10f5ffd3b985c536652d967408ce9ae2 273 PIRSF PIRSF000441 75 262 4.9E-56 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AL549_RS20630 10f5ffd3b985c536652d967408ce9ae2 273 PIRSF PIRSF000441 7 73 120.0 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AL549_RS20630 10f5ffd3b985c536652d967408ce9ae2 273 SUPERFAMILY SSF51161 8 258 5.24E-63 T 28-03-2018 IPR011004 Trimeric LpxA-like AL549_RS20630 10f5ffd3b985c536652d967408ce9ae2 273 Gene3D G3DSA:2.160.10.10 134 261 2.5E-28 T 28-03-2018 AL549_RS20630 10f5ffd3b985c536652d967408ce9ae2 273 SMART SM00971 9 113 4.4E-58 T 28-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AL549_RS20630 10f5ffd3b985c536652d967408ce9ae2 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL549_RS20630 10f5ffd3b985c536652d967408ce9ae2 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.0E-74 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AL549_RS20630 10f5ffd3b985c536652d967408ce9ae2 273 Gene3D G3DSA:1.10.3130.10 1 133 2.1E-37 T 28-03-2018 AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 SMART SM00091 155 221 2.5E-7 T 28-03-2018 IPR000014 PAS domain AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 Pfam PF08448 PAS fold 162 271 4.6E-18 T 28-03-2018 IPR013656 PAS fold-4 AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 SMART SM00448 527 638 5.6E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 Pfam PF01627 Hpt domain 691 764 1.5E-11 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 SUPERFAMILY SSF55874 336 507 1.44E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 Gene3D G3DSA:3.30.450.20 140 277 3.2E-27 T 28-03-2018 AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 1.1E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 2.2E-18 T 28-03-2018 IPR000014 PAS domain AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 PIRSF PIRSF003182 1 780 0.0 T 28-03-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 SUPERFAMILY SSF47384 270 347 8.83E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 SUPERFAMILY SSF52172 527 642 3.98E-25 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 Gene3D G3DSA:1.10.287.130 278 343 7.1E-17 T 28-03-2018 AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 SUPERFAMILY SSF55785 140 267 2.44E-25 T 28-03-2018 IPR000014 PAS domain AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 Gene3D G3DSA:3.30.565.10 353 516 1.1E-42 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 Gene3D G3DSA:1.20.120.160 645 769 2.1E-19 T 28-03-2018 AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 SMART SM00388 282 347 1.9E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 Pfam PF00072 Response regulator receiver domain 529 638 1.1E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 Gene3D G3DSA:1.10.287.970 3 88 7.9E-38 T 28-03-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 4.0E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 4.0E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 4.0E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 4.0E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 4.7E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 SUPERFAMILY SSF47226 666 779 6.93E-28 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 SMART SM00387 394 510 1.2E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 SMART SM00073 680 777 5.0E-8 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS07680 19b44a1704536199e3183ae7b2576f2e 780 Gene3D G3DSA:3.40.50.2300 517 644 5.3E-27 T 28-03-2018 AL549_RS23540 0b841836c71a24f86f4c54265a25f9e4 333 Gene3D G3DSA:1.10.600.10 2 333 2.9E-103 T 28-03-2018 IPR008949 Isoprenoid synthase domain AL549_RS23540 0b841836c71a24f86f4c54265a25f9e4 333 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site AL549_RS23540 0b841836c71a24f86f4c54265a25f9e4 333 SUPERFAMILY SSF48576 12 332 3.04E-101 T 28-03-2018 IPR008949 Isoprenoid synthase domain AL549_RS23540 0b841836c71a24f86f4c54265a25f9e4 333 Pfam PF00348 Polyprenyl synthetase 42 278 6.7E-75 T 28-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 AL549_RS23540 0b841836c71a24f86f4c54265a25f9e4 333 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 91 105 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site AL549_RS11870 d85b36ab1b3646decafde7af48433465 257 SMART SM00420 10 63 1.0E-13 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS11870 d85b36ab1b3646decafde7af48433465 257 Gene3D G3DSA:3.40.50.1360 69 240 1.0E-35 T 28-03-2018 AL549_RS11870 d85b36ab1b3646decafde7af48433465 257 SUPERFAMILY SSF100950 78 236 5.44E-24 T 28-03-2018 AL549_RS11870 d85b36ab1b3646decafde7af48433465 257 Pfam PF00455 DeoR C terminal sensor domain 79 237 3.2E-44 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AL549_RS11870 d85b36ab1b3646decafde7af48433465 257 Gene3D G3DSA:1.10.10.10 2 63 1.1E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS11870 d85b36ab1b3646decafde7af48433465 257 Pfam PF08220 DeoR-like helix-turn-helix domain 10 65 1.1E-15 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS11870 d85b36ab1b3646decafde7af48433465 257 SMART SM01134 77 238 4.5E-58 T 28-03-2018 AL549_RS11870 d85b36ab1b3646decafde7af48433465 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 1.3E-7 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS11870 d85b36ab1b3646decafde7af48433465 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 1.3E-7 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS11870 d85b36ab1b3646decafde7af48433465 257 SUPERFAMILY SSF46785 7 80 5.96E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS06960 beb85c67c8d1ff413fb7cebf045c6571 486 Gene3D G3DSA:3.40.309.10 265 460 3.9E-72 T 28-03-2018 AL549_RS06960 beb85c67c8d1ff413fb7cebf045c6571 486 Pfam PF00171 Aldehyde dehydrogenase family 15 474 1.0E-174 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL549_RS06960 beb85c67c8d1ff413fb7cebf045c6571 486 SUPERFAMILY SSF53720 3 478 3.14E-169 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL549_RS06960 beb85c67c8d1ff413fb7cebf045c6571 486 Gene3D G3DSA:3.40.605.10 1 264 8.0E-100 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL549_RS06960 beb85c67c8d1ff413fb7cebf045c6571 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL549_RS06960 beb85c67c8d1ff413fb7cebf045c6571 486 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 1 486 60.29 T 28-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AL549_RS08780 e1b8667d03afef410b22c349dd6fabab 561 Gene3D G3DSA:3.20.20.470 2 108 4.7E-37 T 28-03-2018 AL549_RS08780 e1b8667d03afef410b22c349dd6fabab 561 Gene3D G3DSA:3.20.20.470 173 345 4.6E-38 T 28-03-2018 AL549_RS08780 e1b8667d03afef410b22c349dd6fabab 561 Gene3D G3DSA:3.90.400.10 109 172 1.8E-29 T 28-03-2018 AL549_RS08780 e1b8667d03afef410b22c349dd6fabab 561 SMART SM00642 18 419 3.9E-166 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS08780 e1b8667d03afef410b22c349dd6fabab 561 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 557 1.8E-271 T 28-03-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 AL549_RS08780 e1b8667d03afef410b22c349dd6fabab 561 Gene3D G3DSA:3.20.20.80 346 473 1.4E-22 T 28-03-2018 AL549_RS08780 e1b8667d03afef410b22c349dd6fabab 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 556 5.6E-7 T 28-03-2018 IPR032091 Maltogenic Amylase, C-terminal AL549_RS08780 e1b8667d03afef410b22c349dd6fabab 561 SUPERFAMILY SSF51445 9 477 8.01E-164 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS08780 e1b8667d03afef410b22c349dd6fabab 561 Pfam PF00128 Alpha amylase, catalytic domain 33 376 3.4E-129 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS08780 e1b8667d03afef410b22c349dd6fabab 561 SUPERFAMILY SSF51011 480 559 1.98E-17 T 28-03-2018 AL549_RS08780 e1b8667d03afef410b22c349dd6fabab 561 Gene3D G3DSA:2.60.40.1180 481 560 3.9E-18 T 28-03-2018 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.0E-96 T 28-03-2018 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.0E-96 T 28-03-2018 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.0E-96 T 28-03-2018 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.0E-96 T 28-03-2018 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.0E-96 T 28-03-2018 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.0E-96 T 28-03-2018 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.0E-96 T 28-03-2018 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.0E-96 T 28-03-2018 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.0E-96 T 28-03-2018 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 SUPERFAMILY SSF50249 347 438 5.97E-21 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 SUPERFAMILY SSF50249 429 539 7.38E-24 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.6E-230 T 28-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 Pfam PF00575 S1 RNA binding domain 449 520 8.9E-16 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 Pfam PF00575 S1 RNA binding domain 189 260 2.7E-21 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 Pfam PF00575 S1 RNA binding domain 18 86 1.2E-6 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 Pfam PF00575 S1 RNA binding domain 104 171 1.2E-7 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 Pfam PF00575 S1 RNA binding domain 362 434 1.8E-20 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 Pfam PF00575 S1 RNA binding domain 275 347 4.1E-21 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 Gene3D G3DSA:2.40.50.140 96 177 1.2E-5 T 28-03-2018 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 Gene3D G3DSA:2.40.50.140 183 266 8.0E-25 T 28-03-2018 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 SUPERFAMILY SSF50249 255 364 2.65E-28 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 SUPERFAMILY SSF50249 88 174 6.86E-13 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 Gene3D G3DSA:2.40.50.140 451 548 3.5E-20 T 28-03-2018 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 Gene3D G3DSA:2.40.50.140 1 92 1.3E-7 T 28-03-2018 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 SUPERFAMILY SSF50249 4 112 1.97E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 SMART SM00316 190 260 7.7E-28 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 SMART SM00316 103 171 1.8E-7 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 SMART SM00316 19 87 4.9E-4 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 SMART SM00316 449 520 1.1E-20 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 SMART SM00316 362 434 2.3E-21 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 SMART SM00316 275 347 8.1E-27 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 SUPERFAMILY SSF50249 189 277 1.42E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 PIRSF PIRSF002111 1 534 6.4E-218 T 28-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 Gene3D G3DSA:2.40.50.140 361 435 3.3E-20 T 28-03-2018 AL549_RS10835 838da8b9b914e31d0ca55317053f3798 556 Gene3D G3DSA:2.40.50.140 274 348 3.2E-27 T 28-03-2018 AL549_RS00965 90b7f4a58556b17d22e44da031a1e974 300 SUPERFAMILY SSF53850 90 294 4.34E-43 T 28-03-2018 AL549_RS00965 90b7f4a58556b17d22e44da031a1e974 300 Gene3D G3DSA:3.40.190.10 176 262 3.1E-23 T 28-03-2018 AL549_RS00965 90b7f4a58556b17d22e44da031a1e974 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.2E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS00965 90b7f4a58556b17d22e44da031a1e974 300 Gene3D G3DSA:1.10.10.10 3 82 2.9E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00965 90b7f4a58556b17d22e44da031a1e974 300 SUPERFAMILY SSF46785 4 86 4.28E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00965 90b7f4a58556b17d22e44da031a1e974 300 Gene3D G3DSA:3.40.190.10 89 175 1.3E-12 T 28-03-2018 AL549_RS00965 90b7f4a58556b17d22e44da031a1e974 300 Pfam PF03466 LysR substrate binding domain 89 290 2.8E-39 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS18470 4f725c69966af975a0b622b70a836d79 362 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 329 1.3E-37 T 28-03-2018 IPR000160 GGDEF domain AL549_RS18470 4f725c69966af975a0b622b70a836d79 362 SUPERFAMILY SSF55073 182 333 5.89E-40 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS18470 4f725c69966af975a0b622b70a836d79 362 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 175 333 1.4E-40 T 28-03-2018 IPR000160 GGDEF domain AL549_RS18470 4f725c69966af975a0b622b70a836d79 362 SMART SM00267 166 333 8.5E-49 T 28-03-2018 IPR000160 GGDEF domain AL549_RS18470 4f725c69966af975a0b622b70a836d79 362 Gene3D G3DSA:3.30.70.270 165 334 4.4E-46 T 28-03-2018 AL549_RS12095 bf9c63607075844ef5ae02bfd1a34597 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 92 155 1.2E-16 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL549_RS12095 bf9c63607075844ef5ae02bfd1a34597 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 396 1.5E-8 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS12095 bf9c63607075844ef5ae02bfd1a34597 401 Gene3D G3DSA:1.10.3720.10 186 401 8.7E-36 T 28-03-2018 AL549_RS12095 bf9c63607075844ef5ae02bfd1a34597 401 Gene3D G3DSA:1.10.3720.10 29 181 2.3E-14 T 28-03-2018 AL549_RS12095 bf9c63607075844ef5ae02bfd1a34597 401 SUPERFAMILY SSF161098 92 160 6.54E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS12095 bf9c63607075844ef5ae02bfd1a34597 401 SUPERFAMILY SSF161098 194 382 3.01E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS15550 1b2d3cbb27a30cf8e58c929520991e8b 514 SMART SM00283 251 512 4.0E-65 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS15550 1b2d3cbb27a30cf8e58c929520991e8b 514 Gene3D G3DSA:1.10.287.950 181 284 1.1E-4 T 28-03-2018 AL549_RS15550 1b2d3cbb27a30cf8e58c929520991e8b 514 Gene3D G3DSA:1.10.287.950 285 514 6.4E-47 T 28-03-2018 AL549_RS15550 1b2d3cbb27a30cf8e58c929520991e8b 514 SUPERFAMILY SSF58104 204 513 1.26E-68 T 28-03-2018 AL549_RS15550 1b2d3cbb27a30cf8e58c929520991e8b 514 SMART SM00304 182 236 9.5E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS15550 1b2d3cbb27a30cf8e58c929520991e8b 514 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 296 478 1.1E-37 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 476 636 1.0E-32 T 28-03-2018 IPR000160 GGDEF domain AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 Gene3D G3DSA:3.30.70.270 469 638 2.0E-36 T 28-03-2018 AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 Gene3D G3DSA:3.30.70.100 200 251 0.0054 T 28-03-2018 AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 Gene3D G3DSA:1.25.40.10 83 199 7.6E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 211 244 55.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 133 166 180.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 251 284 0.0023 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 331 364 180.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 291 324 49.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 174 207 130.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 93 126 61.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 Pfam PF00990 Diguanylate cyclase, GGDEF domain 479 635 3.5E-31 T 28-03-2018 IPR000160 GGDEF domain AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 SUPERFAMILY SSF48452 93 209 1.97E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 Gene3D G3DSA:1.25.40.10 333 455 1.1E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 SUPERFAMILY SSF48452 290 425 9.1E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 SUPERFAMILY SSF48452 176 321 5.31E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00267 466 639 4.3E-35 T 28-03-2018 IPR000160 GGDEF domain AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 SUPERFAMILY SSF55073 483 636 4.63E-33 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 Gene3D G3DSA:1.25.40.10 297 332 1.5E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 Pfam PF13424 Tetratricopeptide repeat 213 283 3.6E-10 T 28-03-2018 AL549_RS12030 d98c11bd6d4558a993c2f495163f0376 644 Gene3D G3DSA:1.10.150.200 252 296 1.9E-10 T 28-03-2018 AL549_RS09090 1d2a06eea4a9171e1804720f87ae5bc5 474 Gene3D G3DSA:1.10.1160.10 235 316 7.3E-33 T 28-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AL549_RS09090 1d2a06eea4a9171e1804720f87ae5bc5 474 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS09090 1d2a06eea4a9171e1804720f87ae5bc5 474 Gene3D G3DSA:1.10.10.350 369 474 4.1E-26 T 28-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL549_RS09090 1d2a06eea4a9171e1804720f87ae5bc5 474 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 465 3.1E-196 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL549_RS09090 1d2a06eea4a9171e1804720f87ae5bc5 474 SUPERFAMILY SSF48163 302 464 2.22E-47 T 28-03-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL549_RS09090 1d2a06eea4a9171e1804720f87ae5bc5 474 SUPERFAMILY SSF52374 3 301 3.22E-108 T 28-03-2018 AL549_RS09090 1d2a06eea4a9171e1804720f87ae5bc5 474 Gene3D G3DSA:1.10.8.70 321 363 1.3E-10 T 28-03-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AL549_RS09090 1d2a06eea4a9171e1804720f87ae5bc5 474 Gene3D G3DSA:3.40.50.620 3 123 5.1E-39 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS09090 1d2a06eea4a9171e1804720f87ae5bc5 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 9.7E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL549_RS09090 1d2a06eea4a9171e1804720f87ae5bc5 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 9.7E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL549_RS09090 1d2a06eea4a9171e1804720f87ae5bc5 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 9.7E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL549_RS09090 1d2a06eea4a9171e1804720f87ae5bc5 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 9.7E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL549_RS09090 1d2a06eea4a9171e1804720f87ae5bc5 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 9.7E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL549_RS09090 1d2a06eea4a9171e1804720f87ae5bc5 474 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 2.9E-114 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AL549_RS09090 1d2a06eea4a9171e1804720f87ae5bc5 474 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 464 32.257 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL549_RS09090 1d2a06eea4a9171e1804720f87ae5bc5 474 Gene3D G3DSA:3.40.50.620 124 234 1.8E-29 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS09165 89b4c4d2f3aff6674ee41226f69378be 434 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 416 2.3E-98 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL549_RS09165 89b4c4d2f3aff6674ee41226f69378be 434 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 355 433 8.4E-16 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL549_RS09165 89b4c4d2f3aff6674ee41226f69378be 434 Pfam PF00460 Flagella basal body rod protein 3 32 7.2E-11 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL549_RS09165 89b4c4d2f3aff6674ee41226f69378be 434 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AL549_RS09165 89b4c4d2f3aff6674ee41226f69378be 434 Gene3D G3DSA:2.60.98.20 154 315 4.4E-30 T 28-03-2018 IPR011491 Flagellar hook protein FlgE AL549_RS09165 89b4c4d2f3aff6674ee41226f69378be 434 PRINTS PR01005 Flagellar hook-associated protein signature 8 31 6.4E-5 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL549_RS09165 89b4c4d2f3aff6674ee41226f69378be 434 PRINTS PR01005 Flagellar hook-associated protein signature 239 261 6.4E-5 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL549_RS09165 89b4c4d2f3aff6674ee41226f69378be 434 SUPERFAMILY SSF117143 78 395 1.03E-72 T 28-03-2018 AL549_RS09165 89b4c4d2f3aff6674ee41226f69378be 434 Pfam PF07559 Flagellar basal body protein FlaE 181 314 8.3E-24 T 28-03-2018 IPR011491 Flagellar hook protein FlgE AL549_RS01030 57245e7ae7fc2a32a76af76825baa627 297 SUPERFAMILY SSF53850 91 293 1.81E-25 T 28-03-2018 AL549_RS01030 57245e7ae7fc2a32a76af76825baa627 297 Pfam PF03466 LysR substrate binding domain 90 294 7.3E-24 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS01030 57245e7ae7fc2a32a76af76825baa627 297 Gene3D G3DSA:1.10.10.10 3 85 1.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01030 57245e7ae7fc2a32a76af76825baa627 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.3E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01030 57245e7ae7fc2a32a76af76825baa627 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.3E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01030 57245e7ae7fc2a32a76af76825baa627 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.3E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01030 57245e7ae7fc2a32a76af76825baa627 297 Gene3D G3DSA:3.40.190.10 86 175 2.9E-9 T 28-03-2018 AL549_RS01030 57245e7ae7fc2a32a76af76825baa627 297 SUPERFAMILY SSF46785 7 80 2.73E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01030 57245e7ae7fc2a32a76af76825baa627 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 6.9E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01030 57245e7ae7fc2a32a76af76825baa627 297 Gene3D G3DSA:3.40.190.10 176 261 1.2E-15 T 28-03-2018 AL549_RS07515 bfefd2a3ea113a50cdd61ff317cda27b 576 Pfam PF00905 Penicillin binding protein transpeptidase domain 263 559 8.3E-80 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL549_RS07515 bfefd2a3ea113a50cdd61ff317cda27b 576 Gene3D G3DSA:3.40.710.10 239 575 1.2E-84 T 28-03-2018 AL549_RS07515 bfefd2a3ea113a50cdd61ff317cda27b 576 Gene3D G3DSA:3.90.1310.10 39 238 4.9E-44 T 28-03-2018 AL549_RS07515 bfefd2a3ea113a50cdd61ff317cda27b 576 Pfam PF03717 Penicillin-binding Protein dimerisation domain 71 224 1.4E-19 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AL549_RS07515 bfefd2a3ea113a50cdd61ff317cda27b 576 SUPERFAMILY SSF56519 65 237 4.58E-46 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AL549_RS07515 bfefd2a3ea113a50cdd61ff317cda27b 576 SUPERFAMILY SSF56601 239 570 2.65E-93 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL549_RS05565 6257fb0d0c15aedbbc5de7c2f9ee6fbd 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 3.7E-183 T 28-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 AL549_RS05565 6257fb0d0c15aedbbc5de7c2f9ee6fbd 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 4.9E-200 T 28-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 AL549_RS05565 6257fb0d0c15aedbbc5de7c2f9ee6fbd 706 Pfam PF03477 ATP cone domain 4 89 1.8E-21 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AL549_RS05565 6257fb0d0c15aedbbc5de7c2f9ee6fbd 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL549_RS05565 6257fb0d0c15aedbbc5de7c2f9ee6fbd 706 SUPERFAMILY SSF51998 121 687 5.04E-194 T 28-03-2018 AL549_RS05565 6257fb0d0c15aedbbc5de7c2f9ee6fbd 706 Gene3D G3DSA:3.20.70.20 121 687 6.1E-207 T 28-03-2018 AL549_RS12915 4af7d7a13c77b439c934d23ea5527e52 283 Pfam PF13276 HTH-like domain 49 95 9.0E-7 T 28-03-2018 IPR025948 HTH-like domain AL549_RS12915 4af7d7a13c77b439c934d23ea5527e52 283 Pfam PF00665 Integrase core domain 125 237 2.7E-29 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AL549_RS12915 4af7d7a13c77b439c934d23ea5527e52 283 Gene3D G3DSA:3.30.420.10 119 282 6.1E-37 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS12915 4af7d7a13c77b439c934d23ea5527e52 283 SUPERFAMILY SSF53098 124 280 1.82E-40 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS12825 4af7d7a13c77b439c934d23ea5527e52 283 Pfam PF13276 HTH-like domain 49 95 9.0E-7 T 28-03-2018 IPR025948 HTH-like domain AL549_RS12825 4af7d7a13c77b439c934d23ea5527e52 283 Pfam PF00665 Integrase core domain 125 237 2.7E-29 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AL549_RS12825 4af7d7a13c77b439c934d23ea5527e52 283 Gene3D G3DSA:3.30.420.10 119 282 6.1E-37 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS12825 4af7d7a13c77b439c934d23ea5527e52 283 SUPERFAMILY SSF53098 124 280 1.82E-40 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS14225 4af7d7a13c77b439c934d23ea5527e52 283 Pfam PF13276 HTH-like domain 49 95 9.0E-7 T 28-03-2018 IPR025948 HTH-like domain AL549_RS14225 4af7d7a13c77b439c934d23ea5527e52 283 Pfam PF00665 Integrase core domain 125 237 2.7E-29 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AL549_RS14225 4af7d7a13c77b439c934d23ea5527e52 283 Gene3D G3DSA:3.30.420.10 119 282 6.1E-37 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS14225 4af7d7a13c77b439c934d23ea5527e52 283 SUPERFAMILY SSF53098 124 280 1.82E-40 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS20840 aadfcf8ccf0ce8da2026c180f3ffb324 154 Pfam PF00364 Biotin-requiring enzyme 79 153 5.6E-25 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AL549_RS20840 aadfcf8ccf0ce8da2026c180f3ffb324 154 SUPERFAMILY SSF51230 79 154 4.97E-26 T 28-03-2018 IPR011053 Single hybrid motif AL549_RS20840 aadfcf8ccf0ce8da2026c180f3ffb324 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 6.8E-62 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL549_RS20840 aadfcf8ccf0ce8da2026c180f3ffb324 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL549_RS20840 aadfcf8ccf0ce8da2026c180f3ffb324 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 6.8E-19 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL549_RS20840 aadfcf8ccf0ce8da2026c180f3ffb324 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 6.8E-19 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL549_RS20840 aadfcf8ccf0ce8da2026c180f3ffb324 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 6.8E-19 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL549_RS20840 aadfcf8ccf0ce8da2026c180f3ffb324 154 Gene3D G3DSA:2.40.50.100 4 154 3.6E-22 T 28-03-2018 AL549_RS16660 6781aefe010d87429063c9c18d390465 757 Gene3D G3DSA:3.40.50.300 169 354 6.8E-25 T 28-03-2018 AL549_RS16660 6781aefe010d87429063c9c18d390465 757 Gene3D G3DSA:1.10.8.60 657 756 1.5E-22 T 28-03-2018 AL549_RS16660 6781aefe010d87429063c9c18d390465 757 Gene3D G3DSA:3.40.50.300 454 656 3.6E-39 T 28-03-2018 AL549_RS16660 6781aefe010d87429063c9c18d390465 757 SMART SM01086 657 746 1.8E-36 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL549_RS16660 6781aefe010d87429063c9c18d390465 757 Pfam PF07724 AAA domain (Cdc48 subfamily) 490 651 5.3E-47 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL549_RS16660 6781aefe010d87429063c9c18d390465 757 Gene3D G3DSA:1.10.1780.10 1 143 9.8E-26 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL549_RS16660 6781aefe010d87429063c9c18d390465 757 SUPERFAMILY SSF52540 171 430 1.32E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16660 6781aefe010d87429063c9c18d390465 757 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 306 318 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AL549_RS16660 6781aefe010d87429063c9c18d390465 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 566 584 4.9E-36 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL549_RS16660 6781aefe010d87429063c9c18d390465 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 495 513 4.9E-36 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL549_RS16660 6781aefe010d87429063c9c18d390465 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 613 4.9E-36 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL549_RS16660 6781aefe010d87429063c9c18d390465 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 537 555 4.9E-36 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL549_RS16660 6781aefe010d87429063c9c18d390465 757 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 59 1.0E-10 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL549_RS16660 6781aefe010d87429063c9c18d390465 757 SUPERFAMILY SSF52540 441 748 1.77E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16660 6781aefe010d87429063c9c18d390465 757 SMART SM00382 491 658 1.0E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS16660 6781aefe010d87429063c9c18d390465 757 SMART SM00382 210 355 1.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS16660 6781aefe010d87429063c9c18d390465 757 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 522 540 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 AL549_RS16660 6781aefe010d87429063c9c18d390465 757 SUPERFAMILY SSF81923 1 142 1.7E-58 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL549_RS16660 6781aefe010d87429063c9c18d390465 757 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 738 0.0 T 28-03-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 AL549_RS16660 6781aefe010d87429063c9c18d390465 757 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 657 737 1.5E-23 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL549_RS16660 6781aefe010d87429063c9c18d390465 757 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 215 331 6.8E-12 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL549_RS16660 6781aefe010d87429063c9c18d390465 757 Gene3D G3DSA:1.10.8.60 355 453 1.7E-27 T 28-03-2018 AL549_RS08390 b0bcb84c7e0c8537d40caa636aa83e87 406 Gene3D G3DSA:3.30.470.20 107 374 2.0E-11 T 28-03-2018 AL549_RS08390 b0bcb84c7e0c8537d40caa636aa83e87 406 SUPERFAMILY SSF56059 281 341 5.77E-9 T 28-03-2018 AL549_RS08390 b0bcb84c7e0c8537d40caa636aa83e87 406 SUPERFAMILY SSF56059 151 211 5.77E-9 T 28-03-2018 AL549_RS08390 b0bcb84c7e0c8537d40caa636aa83e87 406 Pfam PF02222 ATP-grasp domain 150 218 2.6E-4 T 28-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AL549_RS12640 90943477abb0925c80b7a13bf5e9014f 951 Gene3D G3DSA:3.40.50.740 120 206 7.5E-26 T 28-03-2018 AL549_RS12640 90943477abb0925c80b7a13bf5e9014f 951 SUPERFAMILY SSF53706 60 646 6.94E-201 T 28-03-2018 AL549_RS12640 90943477abb0925c80b7a13bf5e9014f 951 SMART SM00926 61 115 7.1E-16 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS12640 90943477abb0925c80b7a13bf5e9014f 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.4E-11 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS12640 90943477abb0925c80b7a13bf5e9014f 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AL549_RS12640 90943477abb0925c80b7a13bf5e9014f 951 Gene3D G3DSA:3.40.228.10 207 443 7.9E-69 T 28-03-2018 AL549_RS12640 90943477abb0925c80b7a13bf5e9014f 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 8.7E-22 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL549_RS12640 90943477abb0925c80b7a13bf5e9014f 951 Gene3D G3DSA:2.20.25.90 56 119 7.1E-15 T 28-03-2018 AL549_RS12640 90943477abb0925c80b7a13bf5e9014f 951 Gene3D G3DSA:3.30.2070.10 541 574 1.6E-8 T 28-03-2018 AL549_RS12640 90943477abb0925c80b7a13bf5e9014f 951 Pfam PF00384 Molybdopterin oxidoreductase 118 568 3.0E-55 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS12640 90943477abb0925c80b7a13bf5e9014f 951 SUPERFAMILY SSF50692 752 782 1.62E-40 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AL549_RS12640 90943477abb0925c80b7a13bf5e9014f 951 SUPERFAMILY SSF50692 813 951 1.62E-40 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AL549_RS12640 90943477abb0925c80b7a13bf5e9014f 951 PIRSF PIRSF036643 785 951 8.8E-17 T 28-03-2018 AL549_RS12640 90943477abb0925c80b7a13bf5e9014f 951 PIRSF PIRSF036643 12 439 6.8E-101 T 28-03-2018 AL549_RS12640 90943477abb0925c80b7a13bf5e9014f 951 PIRSF PIRSF036643 641 677 420.0 T 28-03-2018 AL549_RS12640 90943477abb0925c80b7a13bf5e9014f 951 PIRSF PIRSF036643 448 593 3.9E-11 T 28-03-2018 AL549_RS12640 90943477abb0925c80b7a13bf5e9014f 951 Gene3D G3DSA:2.40.40.20 766 951 6.3E-39 T 28-03-2018 AL549_RS12640 90943477abb0925c80b7a13bf5e9014f 951 Gene3D G3DSA:3.40.228.10 455 540 1.5E-4 T 28-03-2018 AL549_RS01605 285b1a684f322d6c1184d8179d408481 817 SUPERFAMILY SSF53756 8 815 0.0 T 28-03-2018 AL549_RS01605 285b1a684f322d6c1184d8179d408481 817 Gene3D G3DSA:3.40.50.2000 482 797 3.5E-132 T 28-03-2018 AL549_RS01605 285b1a684f322d6c1184d8179d408481 817 Gene3D G3DSA:3.40.50.2000 2 481 8.9E-185 T 28-03-2018 AL549_RS01605 285b1a684f322d6c1184d8179d408481 817 PIRSF PIRSF000460 1 817 1.6E-211 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AL549_RS01605 285b1a684f322d6c1184d8179d408481 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AL549_RS01605 285b1a684f322d6c1184d8179d408481 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 28-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AL549_RS01605 285b1a684f322d6c1184d8179d408481 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 11 812 0.0 T 28-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AL549_RS04345 7bac8f4f8c9c549ae5b45d9d25627506 421 SUPERFAMILY SSF51419 48 282 1.1E-31 T 28-03-2018 IPR029066 PLP-binding barrel AL549_RS04345 7bac8f4f8c9c549ae5b45d9d25627506 421 SMART SM01119 311 408 1.7E-29 T 28-03-2018 IPR026956 D-serine dehydratase-like domain AL549_RS04345 7bac8f4f8c9c549ae5b45d9d25627506 421 Pfam PF14031 Putative serine dehydratase domain 311 404 9.4E-14 T 28-03-2018 IPR026956 D-serine dehydratase-like domain AL549_RS04345 7bac8f4f8c9c549ae5b45d9d25627506 421 Pfam PF01168 Alanine racemase, N-terminal domain 48 251 1.7E-14 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS04345 7bac8f4f8c9c549ae5b45d9d25627506 421 Gene3D G3DSA:3.20.20.10 25 291 1.3E-37 T 28-03-2018 IPR029066 PLP-binding barrel AL549_RS20445 1dc342a9798313163dc16e56a247d0de 817 Pfam PF08461 Ribonuclease R winged-helix domain 27 88 2.8E-12 T 28-03-2018 IPR013668 Ribonuclease R winged-helix domain AL549_RS20445 1dc342a9798313163dc16e56a247d0de 817 Pfam PF00773 RNB domain 267 594 1.7E-107 T 28-03-2018 AL549_RS20445 1dc342a9798313163dc16e56a247d0de 817 SUPERFAMILY SSF50249 71 153 2.4E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS20445 1dc342a9798313163dc16e56a247d0de 817 SMART SM00316 650 733 6.0E-14 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL549_RS20445 1dc342a9798313163dc16e56a247d0de 817 Gene3D G3DSA:2.40.50.140 649 734 4.2E-20 T 28-03-2018 AL549_RS20445 1dc342a9798313163dc16e56a247d0de 817 Pfam PF00575 S1 RNA binding domain 650 731 9.2E-13 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL549_RS20445 1dc342a9798313163dc16e56a247d0de 817 SMART SM00357 90 152 1.9E-15 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AL549_RS20445 1dc342a9798313163dc16e56a247d0de 817 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 28-03-2018 IPR022966 Ribonuclease II/R, conserved site AL549_RS20445 1dc342a9798313163dc16e56a247d0de 817 SUPERFAMILY SSF50249 145 244 3.47E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS20445 1dc342a9798313163dc16e56a247d0de 817 SUPERFAMILY SSF50249 651 739 7.86E-22 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS20445 1dc342a9798313163dc16e56a247d0de 817 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 733 8.3E-275 T 28-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AL549_RS20445 1dc342a9798313163dc16e56a247d0de 817 Gene3D G3DSA:1.10.10.10 22 83 9.4E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS20445 1dc342a9798313163dc16e56a247d0de 817 SMART SM00955 267 595 6.9E-185 T 28-03-2018 AL549_RS20445 1dc342a9798313163dc16e56a247d0de 817 SUPERFAMILY SSF50249 227 650 2.17E-143 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS20445 1dc342a9798313163dc16e56a247d0de 817 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 1.8E-255 T 28-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AL549_RS20445 1dc342a9798313163dc16e56a247d0de 817 Pfam PF08206 Ribonuclease B OB domain 91 151 1.4E-21 T 28-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain AL549_RS20445 1dc342a9798313163dc16e56a247d0de 817 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 59.057 T 28-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 328 5.8E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.2E-19 T 28-03-2018 AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 2.2E-19 T 28-03-2018 AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 2.2E-19 T 28-03-2018 AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 2.2E-19 T 28-03-2018 AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 SUPERFAMILY SSF55424 344 466 9.28E-35 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 451 1.0E-16 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 Pfam PF00581 Rhodanese-like domain 482 562 1.3E-9 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 SUPERFAMILY SSF51905 155 341 1.51E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 Gene3D G3DSA:3.50.50.60 2 126 2.8E-17 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 Gene3D G3DSA:3.50.50.60 127 274 6.9E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 SMART SM00450 473 565 1.4E-12 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 SUPERFAMILY SSF51905 2 197 4.73E-39 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 Gene3D G3DSA:3.50.50.60 275 367 3.6E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 Gene3D G3DSA:3.30.390.30 368 462 1.0E-24 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 SUPERFAMILY SSF52821 459 562 1.57E-24 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 Gene3D G3DSA:3.40.250.10 463 565 1.9E-20 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 5.1E-23 T 28-03-2018 AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.1E-23 T 28-03-2018 AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 5.1E-23 T 28-03-2018 AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 5.1E-23 T 28-03-2018 AL549_RS05525 ee6f6b28bb63e20c8f2c5200c18078f9 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 5.1E-23 T 28-03-2018 AL549_RS21730 4b2afe4237faddbc78ea9fdba552b476 468 SUPERFAMILY SSF48295 364 467 3.66E-38 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AL549_RS21730 4b2afe4237faddbc78ea9fdba552b476 468 Pfam PF11638 DnaA N-terminal domain 4 65 9.7E-20 T 28-03-2018 IPR024633 DnaA N-terminal domain AL549_RS21730 4b2afe4237faddbc78ea9fdba552b476 468 Gene3D G3DSA:1.10.8.60 299 370 4.5E-29 T 28-03-2018 AL549_RS21730 4b2afe4237faddbc78ea9fdba552b476 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 186 1.7E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL549_RS21730 4b2afe4237faddbc78ea9fdba552b476 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 1.7E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL549_RS21730 4b2afe4237faddbc78ea9fdba552b476 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 230 244 1.7E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL549_RS21730 4b2afe4237faddbc78ea9fdba552b476 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 264 291 1.7E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL549_RS21730 4b2afe4237faddbc78ea9fdba552b476 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 426 445 1.7E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL549_RS21730 4b2afe4237faddbc78ea9fdba552b476 468 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 377 445 1.8E-32 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AL549_RS21730 4b2afe4237faddbc78ea9fdba552b476 468 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 466 1.1E-186 T 28-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AL549_RS21730 4b2afe4237faddbc78ea9fdba552b476 468 SMART SM00760 376 445 3.4E-45 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AL549_RS21730 4b2afe4237faddbc78ea9fdba552b476 468 Pfam PF00308 Bacterial dnaA protein 134 350 1.0E-97 T 28-03-2018 IPR013317 Chromosomal replication initiator protein DnaA AL549_RS21730 4b2afe4237faddbc78ea9fdba552b476 468 Gene3D G3DSA:1.10.1750.10 371 467 1.5E-36 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AL549_RS21730 4b2afe4237faddbc78ea9fdba552b476 468 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 467 34.492 T 28-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AL549_RS21730 4b2afe4237faddbc78ea9fdba552b476 468 ProSitePatterns PS01008 DnaA protein signature. 426 445 - T 28-03-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AL549_RS21730 4b2afe4237faddbc78ea9fdba552b476 468 Gene3D G3DSA:3.40.50.300 130 297 8.3E-22 T 28-03-2018 AL549_RS21730 4b2afe4237faddbc78ea9fdba552b476 468 SMART SM00382 165 378 4.7E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS21730 4b2afe4237faddbc78ea9fdba552b476 468 SUPERFAMILY SSF52540 133 344 5.31E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS02145 45e3912e1c86af073c23a2b5f869aa63 704 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 3 698 4.8E-291 T 28-03-2018 IPR017750 ATPase, type I secretion system AL549_RS02145 45e3912e1c86af073c23a2b5f869aa63 704 Gene3D G3DSA:3.40.50.300 466 699 3.9E-64 T 28-03-2018 AL549_RS02145 45e3912e1c86af073c23a2b5f869aa63 704 Gene3D G3DSA:1.20.1560.10 137 457 1.3E-29 T 28-03-2018 AL549_RS02145 45e3912e1c86af073c23a2b5f869aa63 704 SMART SM00382 495 681 5.9E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS02145 45e3912e1c86af073c23a2b5f869aa63 704 Pfam PF00664 ABC transporter transmembrane region 158 417 2.0E-21 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS02145 45e3912e1c86af073c23a2b5f869aa63 704 SUPERFAMILY SSF52540 459 693 1.25E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS02145 45e3912e1c86af073c23a2b5f869aa63 704 Pfam PF00005 ABC transporter 487 635 1.1E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS02145 45e3912e1c86af073c23a2b5f869aa63 704 Gene3D G3DSA:3.90.70.10 1 126 3.6E-15 T 28-03-2018 AL549_RS02145 45e3912e1c86af073c23a2b5f869aa63 704 ProSitePatterns PS00211 ABC transporters family signature. 607 621 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS02145 45e3912e1c86af073c23a2b5f869aa63 704 SUPERFAMILY SSF90123 142 452 2.09E-49 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 154 1.1E-23 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:2.40.50.250 487 577 6.2E-39 T 28-03-2018 AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 SUPERFAMILY SSF52540 5 211 1.06E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:3.40.50.300 72 189 2.2E-30 T 28-03-2018 AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 197 9.3E-57 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 SUPERFAMILY SSF50447 155 303 1.04E-35 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 SUPERFAMILY SSF54980 306 391 3.35E-15 T 28-03-2018 IPR035647 EF-G domain III/V-like AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 SUPERFAMILY SSF54980 402 516 1.39E-27 T 28-03-2018 IPR035647 EF-G domain III/V-like AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:3.40.50.300 3 71 8.1E-11 T 28-03-2018 AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:3.30.70.870 306 404 3.2E-33 T 28-03-2018 AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:3.30.70.240 405 486 4.7E-21 T 28-03-2018 AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 1.1E-295 T 28-03-2018 IPR006298 GTP-binding protein TypA GO:0005525 AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 1.4E-10 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 Pfam PF00679 Elongation factor G C-terminus 399 480 7.0E-23 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AL549_RS22425 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:2.40.30.10 190 304 8.3E-26 T 28-03-2018 AL549_RS14835 500220481c282787e967fcb264720501 154 Pfam PF04266 ASCH domain 42 153 5.4E-25 T 28-03-2018 IPR007374 ASCH domain AL549_RS14835 500220481c282787e967fcb264720501 154 Gene3D G3DSA:3.10.400.10 7 153 6.1E-54 T 28-03-2018 AL549_RS14835 500220481c282787e967fcb264720501 154 SUPERFAMILY SSF88697 4 153 5.72E-53 T 28-03-2018 IPR015947 PUA-like domain AL549_RS14835 500220481c282787e967fcb264720501 154 PIRSF PIRSF021320 2 154 5.6E-43 T 28-03-2018 IPR009326 Protein of unknown function DUF984 AL549_RS14835 500220481c282787e967fcb264720501 154 SMART SM01022 30 153 1.3E-41 T 28-03-2018 IPR007374 ASCH domain AL549_RS13820 500220481c282787e967fcb264720501 154 Pfam PF04266 ASCH domain 42 153 5.4E-25 T 28-03-2018 IPR007374 ASCH domain AL549_RS13820 500220481c282787e967fcb264720501 154 Gene3D G3DSA:3.10.400.10 7 153 6.1E-54 T 28-03-2018 AL549_RS13820 500220481c282787e967fcb264720501 154 SUPERFAMILY SSF88697 4 153 5.72E-53 T 28-03-2018 IPR015947 PUA-like domain AL549_RS13820 500220481c282787e967fcb264720501 154 PIRSF PIRSF021320 2 154 5.6E-43 T 28-03-2018 IPR009326 Protein of unknown function DUF984 AL549_RS13820 500220481c282787e967fcb264720501 154 SMART SM01022 30 153 1.3E-41 T 28-03-2018 IPR007374 ASCH domain AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 510 3.0E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 471 3.0E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 534 3.0E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 553 3.0E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 SMART SM00387 412 556 1.2E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 SMART SM00073 5 102 8.0E-21 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 Gene3D G3DSA:1.10.287.560 304 368 6.0E-18 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 SMART SM00260 548 687 1.1E-37 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 SUPERFAMILY SSF55874 371 554 3.14E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 306 367 7.3E-16 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 SUPERFAMILY SSF50341 555 687 4.05E-30 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 415 555 1.0E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 Gene3D G3DSA:3.30.565.10 371 557 6.9E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 Pfam PF01584 CheW-like domain 563 688 3.0E-26 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 Gene3D G3DSA:2.40.50.180 570 641 5.9E-9 T 28-03-2018 AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 Gene3D G3DSA:1.20.120.160 1 145 9.1E-34 T 28-03-2018 AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 SUPERFAMILY SSF47384 306 368 2.24E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 Gene3D G3DSA:2.30.30.40 642 687 1.1E-21 T 28-03-2018 AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 Pfam PF01627 Hpt domain 7 96 1.1E-17 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 SUPERFAMILY SSF47226 4 128 1.01E-30 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS01980 7ce1b71dc7572a5bf668565ae4d09c50 704 SMART SM01231 304 367 4.1E-19 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AL549_RS04430 fb10f1b02d2c9aa94b1eda7298adb7cd 140 Gene3D G3DSA:2.20.25.10 1 43 1.9E-17 T 28-03-2018 AL549_RS04430 fb10f1b02d2c9aa94b1eda7298adb7cd 140 Gene3D G3DSA:3.30.300.20 44 140 8.7E-28 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL549_RS04430 fb10f1b02d2c9aa94b1eda7298adb7cd 140 Pfam PF02566 OsmC-like protein 38 133 5.8E-18 T 28-03-2018 IPR003718 OsmC/Ohr family AL549_RS04430 fb10f1b02d2c9aa94b1eda7298adb7cd 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 135 4.9E-52 T 28-03-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 AL549_RS04430 fb10f1b02d2c9aa94b1eda7298adb7cd 140 SUPERFAMILY SSF82784 1 135 9.42E-41 T 28-03-2018 IPR003718 OsmC/Ohr family AL549_RS13745 48e5546fb65f43e7ab0222cd9b2b0106 139 SUPERFAMILY SSF55729 8 137 4.96E-23 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS13745 48e5546fb65f43e7ab0222cd9b2b0106 139 Pfam PF00583 Acetyltransferase (GNAT) family 18 112 6.6E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS13745 48e5546fb65f43e7ab0222cd9b2b0106 139 Gene3D G3DSA:3.40.630.30 2 135 2.3E-21 T 28-03-2018 AL549_RS02500 4446a4cff8d71f9d8615b6e26065306c 272 Gene3D G3DSA:2.60.120.10 2 162 1.7E-6 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS02500 4446a4cff8d71f9d8615b6e26065306c 272 Gene3D G3DSA:1.10.10.60 222 267 3.8E-10 T 28-03-2018 AL549_RS02500 4446a4cff8d71f9d8615b6e26065306c 272 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 220 261 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL549_RS02500 4446a4cff8d71f9d8615b6e26065306c 272 Pfam PF12833 Helix-turn-helix domain 191 265 9.3E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS02500 4446a4cff8d71f9d8615b6e26065306c 272 SMART SM00342 183 265 1.1E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS02500 4446a4cff8d71f9d8615b6e26065306c 272 Gene3D G3DSA:1.10.10.60 163 221 7.5E-10 T 28-03-2018 AL549_RS02500 4446a4cff8d71f9d8615b6e26065306c 272 SUPERFAMILY SSF46689 224 267 1.79E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS02500 4446a4cff8d71f9d8615b6e26065306c 272 SUPERFAMILY SSF51182 30 191 1.03E-12 T 28-03-2018 IPR011051 RmlC-like cupin domain AL549_RS02605 92384b6e26b9f7dec4701aee30db7961 299 Gene3D G3DSA:1.10.10.10 1 81 2.6E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02605 92384b6e26b9f7dec4701aee30db7961 299 Gene3D G3DSA:3.40.190.10 180 267 5.6E-13 T 28-03-2018 AL549_RS02605 92384b6e26b9f7dec4701aee30db7961 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 59 1.9E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS02605 92384b6e26b9f7dec4701aee30db7961 299 Gene3D G3DSA:3.40.190.10 89 179 7.6E-12 T 28-03-2018 AL549_RS02605 92384b6e26b9f7dec4701aee30db7961 299 SUPERFAMILY SSF46785 1 75 7.77E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02605 92384b6e26b9f7dec4701aee30db7961 299 SUPERFAMILY SSF53850 85 293 3.26E-40 T 28-03-2018 AL549_RS02605 92384b6e26b9f7dec4701aee30db7961 299 Pfam PF03466 LysR substrate binding domain 91 294 5.9E-21 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS18740 7244a0e34f82d47d04d0cce0977fd4be 470 Gene3D G3DSA:3.30.310.50 383 469 4.2E-17 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18740 7244a0e34f82d47d04d0cce0977fd4be 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18740 7244a0e34f82d47d04d0cce0977fd4be 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18740 7244a0e34f82d47d04d0cce0977fd4be 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18740 7244a0e34f82d47d04d0cce0977fd4be 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18740 7244a0e34f82d47d04d0cce0977fd4be 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 419 466 5.3E-9 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18740 7244a0e34f82d47d04d0cce0977fd4be 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 4.7E-24 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18740 7244a0e34f82d47d04d0cce0977fd4be 470 SUPERFAMILY SSF53738 250 379 2.67E-30 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18740 7244a0e34f82d47d04d0cce0977fd4be 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 4.3E-26 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18740 7244a0e34f82d47d04d0cce0977fd4be 470 SUPERFAMILY SSF55957 373 459 2.22E-17 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18740 7244a0e34f82d47d04d0cce0977fd4be 470 Gene3D G3DSA:3.40.120.10 272 382 2.8E-31 T 28-03-2018 AL549_RS18740 7244a0e34f82d47d04d0cce0977fd4be 470 SUPERFAMILY SSF53738 2 187 4.32E-40 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18740 7244a0e34f82d47d04d0cce0977fd4be 470 Gene3D G3DSA:3.40.120.10 1 165 3.5E-41 T 28-03-2018 AL549_RS18740 7244a0e34f82d47d04d0cce0977fd4be 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 136 2.9E-37 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18740 7244a0e34f82d47d04d0cce0977fd4be 470 Gene3D G3DSA:3.40.120.10 166 271 1.3E-26 T 28-03-2018 AL549_RS00180 1f459db516c432f4268ac1b4ba316991 637 Pfam PF00672 HAMP domain 307 356 1.3E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS00180 1f459db516c432f4268ac1b4ba316991 637 SMART SM00283 375 636 2.5E-85 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS00180 1f459db516c432f4268ac1b4ba316991 637 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 502 531 7.1E-23 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS00180 1f459db516c432f4268ac1b4ba316991 637 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 7.1E-23 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS00180 1f459db516c432f4268ac1b4ba316991 637 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 473 500 7.1E-23 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS00180 1f459db516c432f4268ac1b4ba316991 637 Gene3D G3DSA:3.30.450.20 126 285 1.5E-20 T 28-03-2018 AL549_RS00180 1f459db516c432f4268ac1b4ba316991 637 SUPERFAMILY SSF58104 328 637 9.02E-80 T 28-03-2018 AL549_RS00180 1f459db516c432f4268ac1b4ba316991 637 SMART SM00304 306 360 3.6E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS00180 1f459db516c432f4268ac1b4ba316991 637 Pfam PF02743 Cache domain 52 268 5.0E-13 T 28-03-2018 IPR033479 Double Cache domain 1 AL549_RS00180 1f459db516c432f4268ac1b4ba316991 637 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 439 603 3.1E-43 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS00180 1f459db516c432f4268ac1b4ba316991 637 Gene3D G3DSA:1.10.287.950 409 637 1.2E-56 T 28-03-2018 AL549_RS00180 1f459db516c432f4268ac1b4ba316991 637 Gene3D G3DSA:1.10.287.950 303 408 1.3E-7 T 28-03-2018 AL549_RS12185 4b9779127d0822fcc2984119f0f2828b 228 PIRSF PIRSF006171 3 228 8.1E-83 T 28-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 AL549_RS12185 4b9779127d0822fcc2984119f0f2828b 228 SUPERFAMILY SSF52172 5 135 1.39E-32 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS12185 4b9779127d0822fcc2984119f0f2828b 228 Gene3D G3DSA:1.10.10.10 144 226 3.8E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS12185 4b9779127d0822fcc2984119f0f2828b 228 Gene3D G3DSA:3.40.50.2300 4 143 8.3E-30 T 28-03-2018 AL549_RS12185 4b9779127d0822fcc2984119f0f2828b 228 Pfam PF12431 Transcriptional regulator 134 162 4.0E-8 T 28-03-2018 IPR028141 Transcriptional regulator AL549_RS12185 4b9779127d0822fcc2984119f0f2828b 228 Pfam PF00072 Response regulator receiver domain 7 118 2.1E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS12185 4b9779127d0822fcc2984119f0f2828b 228 SMART SM00448 5 118 9.0E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS03625 b71863d644055a04cc2d5ffcfd426c0f 356 SUPERFAMILY SSF51569 12 346 4.19E-115 T 28-03-2018 AL549_RS03625 b71863d644055a04cc2d5ffcfd426c0f 356 PIRSF PIRSF001361 4 351 1.9E-147 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL549_RS03625 b71863d644055a04cc2d5ffcfd426c0f 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 16 345 2.0E-132 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL549_RS03625 b71863d644055a04cc2d5ffcfd426c0f 356 Pfam PF00793 DAHP synthetase I family 44 337 1.6E-84 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL549_RS03625 b71863d644055a04cc2d5ffcfd426c0f 356 Gene3D G3DSA:3.20.20.70 8 352 1.1E-106 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS15800 1bce8a50f5e6c1af0220b2a213e09493 371 SUPERFAMILY SSF53756 8 370 1.02E-61 T 28-03-2018 AL549_RS15800 1bce8a50f5e6c1af0220b2a213e09493 371 Pfam PF00534 Glycosyl transferases group 1 202 345 1.9E-26 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL549_RS15800 1bce8a50f5e6c1af0220b2a213e09493 371 Gene3D G3DSA:3.40.50.2000 7 177 9.2E-8 T 28-03-2018 AL549_RS15800 1bce8a50f5e6c1af0220b2a213e09493 371 Pfam PF13439 Glycosyltransferase Family 4 21 180 7.5E-16 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL549_RS15800 1bce8a50f5e6c1af0220b2a213e09493 371 Gene3D G3DSA:3.40.50.2000 178 364 5.4E-34 T 28-03-2018 AL549_RS22495 5a802851f90f98dc163973cd49378ee6 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 10 142 4.3E-58 T 28-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AL549_RS22495 5a802851f90f98dc163973cd49378ee6 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AL549_RS22495 5a802851f90f98dc163973cd49378ee6 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AL549_RS22495 5a802851f90f98dc163973cd49378ee6 147 SUPERFAMILY SSF54523 36 142 1.94E-38 T 28-03-2018 AL549_RS22495 5a802851f90f98dc163973cd49378ee6 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 6.9E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS22495 5a802851f90f98dc163973cd49378ee6 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS22495 5a802851f90f98dc163973cd49378ee6 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 3.4E-43 T 28-03-2018 IPR013545 Type II secretion system protein G AL549_RS22495 5a802851f90f98dc163973cd49378ee6 147 Gene3D G3DSA:3.30.700.10 24 141 2.0E-30 T 28-03-2018 AL549_RS22495 5a802851f90f98dc163973cd49378ee6 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 30 1.5E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS22400 d57b9c3f86602ed55aad47a17bf7bf68 469 Pfam PF00072 Response regulator receiver domain 6 115 5.3E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS22400 d57b9c3f86602ed55aad47a17bf7bf68 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL549_RS22400 d57b9c3f86602ed55aad47a17bf7bf68 469 Pfam PF00158 Sigma-54 interaction domain 143 309 2.7E-71 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL549_RS22400 d57b9c3f86602ed55aad47a17bf7bf68 469 Gene3D G3DSA:3.40.50.300 140 315 1.1E-28 T 28-03-2018 AL549_RS22400 d57b9c3f86602ed55aad47a17bf7bf68 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL549_RS22400 d57b9c3f86602ed55aad47a17bf7bf68 469 SUPERFAMILY SSF46689 383 468 1.25E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS22400 d57b9c3f86602ed55aad47a17bf7bf68 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL549_RS22400 d57b9c3f86602ed55aad47a17bf7bf68 469 SMART SM00448 4 115 5.7E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS22400 d57b9c3f86602ed55aad47a17bf7bf68 469 Gene3D G3DSA:1.10.10.60 388 469 2.7E-23 T 28-03-2018 AL549_RS22400 d57b9c3f86602ed55aad47a17bf7bf68 469 Gene3D G3DSA:3.40.50.2300 3 139 3.8E-35 T 28-03-2018 AL549_RS22400 d57b9c3f86602ed55aad47a17bf7bf68 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 451 469 2.4E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS22400 d57b9c3f86602ed55aad47a17bf7bf68 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 451 2.4E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS22400 d57b9c3f86602ed55aad47a17bf7bf68 469 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 468 2.1E-239 T 28-03-2018 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 AL549_RS22400 d57b9c3f86602ed55aad47a17bf7bf68 469 Pfam PF02954 Bacterial regulatory protein, Fis family 428 468 6.3E-16 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS22400 d57b9c3f86602ed55aad47a17bf7bf68 469 SMART SM00382 163 306 1.1E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS22400 d57b9c3f86602ed55aad47a17bf7bf68 469 SUPERFAMILY SSF52540 142 386 2.57E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS22400 d57b9c3f86602ed55aad47a17bf7bf68 469 Gene3D G3DSA:1.10.8.60 316 387 2.4E-21 T 28-03-2018 AL549_RS22400 d57b9c3f86602ed55aad47a17bf7bf68 469 SUPERFAMILY SSF52172 2 188 4.41E-44 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS09140 95b9670cfe68907bb6694ab74ab9ef81 308 Gene3D G3DSA:2.40.50.180 39 104 1.7E-13 T 28-03-2018 AL549_RS09140 95b9670cfe68907bb6694ab74ab9ef81 308 Gene3D G3DSA:2.30.30.40 105 147 4.3E-11 T 28-03-2018 AL549_RS09140 95b9670cfe68907bb6694ab74ab9ef81 308 PIRSF PIRSF002867 1 308 2.5E-103 T 28-03-2018 IPR024181 Chemotaxis response regulator CheV AL549_RS09140 95b9670cfe68907bb6694ab74ab9ef81 308 SUPERFAMILY SSF50341 16 157 1.26E-35 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS09140 95b9670cfe68907bb6694ab74ab9ef81 308 Pfam PF01584 CheW-like domain 21 155 8.5E-35 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS09140 95b9670cfe68907bb6694ab74ab9ef81 308 SMART SM00448 182 302 2.0E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS09140 95b9670cfe68907bb6694ab74ab9ef81 308 SMART SM00260 17 153 6.3E-26 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS09140 95b9670cfe68907bb6694ab74ab9ef81 308 Pfam PF00072 Response regulator receiver domain 184 302 8.5E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS09140 95b9670cfe68907bb6694ab74ab9ef81 308 Gene3D G3DSA:3.40.50.2300 176 308 5.1E-26 T 28-03-2018 AL549_RS09140 95b9670cfe68907bb6694ab74ab9ef81 308 SUPERFAMILY SSF52172 183 306 5.55E-26 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS00915 392fc7e3d8681959ff6bd92612c6964b 477 Pfam PF00155 Aminotransferase class I and II 146 458 6.7E-24 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL549_RS00915 392fc7e3d8681959ff6bd92612c6964b 477 SMART SM00345 16 75 5.8E-18 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS00915 392fc7e3d8681959ff6bd92612c6964b 477 Gene3D G3DSA:3.40.640.10 152 356 2.9E-35 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS00915 392fc7e3d8681959ff6bd92612c6964b 477 Gene3D G3DSA:3.90.1150.10 357 477 7.0E-20 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS00915 392fc7e3d8681959ff6bd92612c6964b 477 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 8.3E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS00915 392fc7e3d8681959ff6bd92612c6964b 477 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 8.3E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS00915 392fc7e3d8681959ff6bd92612c6964b 477 SUPERFAMILY SSF46785 10 86 6.48E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00915 392fc7e3d8681959ff6bd92612c6964b 477 SUPERFAMILY SSF53383 97 475 4.03E-75 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS00915 392fc7e3d8681959ff6bd92612c6964b 477 Gene3D G3DSA:1.10.10.10 3 77 2.4E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00915 392fc7e3d8681959ff6bd92612c6964b 477 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 2.1E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS15410 6f882aa8860e41d121e2ec065ac13513 229 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.8E-12 T 28-03-2018 IPR024498 Domain of unknown function DUF2786 AL549_RS15410 6f882aa8860e41d121e2ec065ac13513 229 PIRSF PIRSF028111 1 229 2.4E-86 T 28-03-2018 IPR016868 Bacteriophage B3, Orf5 AL549_RS22545 ec56d229d4255aad729e63a6fbd2ed47 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 180 2.0E-28 T 28-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AL549_RS22545 ec56d229d4255aad729e63a6fbd2ed47 194 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 4 194 2.1E-95 T 28-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AL549_RS22545 ec56d229d4255aad729e63a6fbd2ed47 194 SUPERFAMILY SSF117916 97 186 6.1E-22 T 28-03-2018 IPR034904 Fe-S cluster assembly domain AL549_RS22545 ec56d229d4255aad729e63a6fbd2ed47 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 44.072 T 28-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AL549_RS22545 ec56d229d4255aad729e63a6fbd2ed47 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 3 101 1.2E-12 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL549_RS22545 ec56d229d4255aad729e63a6fbd2ed47 194 SUPERFAMILY SSF89360 3 99 2.35E-22 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL549_RS22545 ec56d229d4255aad729e63a6fbd2ed47 194 Gene3D G3DSA:3.30.300.130 104 190 6.6E-24 T 28-03-2018 IPR034904 Fe-S cluster assembly domain AL549_RS22545 ec56d229d4255aad729e63a6fbd2ed47 194 Gene3D G3DSA:2.60.300.12 2 100 1.7E-17 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL549_RS22545 ec56d229d4255aad729e63a6fbd2ed47 194 Pfam PF01106 NifU-like domain 113 179 5.2E-19 T 28-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AL549_RS10160 d6133fee78bb8217444ef82614d60678 606 Gene3D G3DSA:3.40.720.10 256 546 1.8E-33 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS10160 d6133fee78bb8217444ef82614d60678 606 SUPERFAMILY SSF53649 256 586 4.22E-51 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS10160 d6133fee78bb8217444ef82614d60678 606 Pfam PF00884 Sulfatase 273 519 4.6E-24 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL549_RS10160 d6133fee78bb8217444ef82614d60678 606 PIRSF PIRSF004950 6 604 8.7E-251 T 28-03-2018 IPR012159 Inner membrane protein YejM AL549_RS10160 d6133fee78bb8217444ef82614d60678 606 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 5.9E-99 T 28-03-2018 IPR024588 Inner membrane protein YejM, N-terminal AL549_RS09440 357580ae679ac91485871a09d001ba56 127 Pfam PF01042 Endoribonuclease L-PSP 9 125 3.1E-43 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AL549_RS09440 357580ae679ac91485871a09d001ba56 127 Gene3D G3DSA:3.30.1330.40 1 127 1.3E-49 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL549_RS09440 357580ae679ac91485871a09d001ba56 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 125 7.0E-50 T 28-03-2018 IPR006056 RidA family AL549_RS09440 357580ae679ac91485871a09d001ba56 127 SUPERFAMILY SSF55298 3 126 1.57E-47 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL549_RS09440 357580ae679ac91485871a09d001ba56 127 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 28-03-2018 IPR019897 RidA, conserved site AL549_RS07255 fb4f1087a90face4105292b558afd59f 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 423 589 1.8E-43 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS07255 fb4f1087a90face4105292b558afd59f 623 Gene3D G3DSA:3.30.450.20 161 271 2.2E-26 T 28-03-2018 AL549_RS07255 fb4f1087a90face4105292b558afd59f 623 SUPERFAMILY SSF58104 314 621 4.97E-76 T 28-03-2018 AL549_RS07255 fb4f1087a90face4105292b558afd59f 623 Gene3D G3DSA:1.10.287.950 390 592 4.7E-52 T 28-03-2018 AL549_RS07255 fb4f1087a90face4105292b558afd59f 623 SUPERFAMILY SSF103190 56 184 1.7E-17 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL549_RS07255 fb4f1087a90face4105292b558afd59f 623 Pfam PF02743 Cache domain 32 254 8.7E-29 T 28-03-2018 IPR033479 Double Cache domain 1 AL549_RS07255 fb4f1087a90face4105292b558afd59f 623 Pfam PF00672 HAMP domain 292 342 1.7E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS07255 fb4f1087a90face4105292b558afd59f 623 SMART SM00283 361 622 9.4E-78 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS07255 fb4f1087a90face4105292b558afd59f 623 SMART SM00304 292 346 9.0E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS07255 fb4f1087a90face4105292b558afd59f 623 Gene3D G3DSA:3.30.450.20 25 160 2.0E-19 T 28-03-2018 AL549_RS07255 fb4f1087a90face4105292b558afd59f 623 Gene3D G3DSA:1.10.287.950 288 389 9.7E-5 T 28-03-2018 AL549_RS00275 dd7642a3736b655a1a765d66e05bccb1 447 SMART SM00490 264 345 7.2E-32 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS00275 dd7642a3736b655a1a765d66e05bccb1 447 SMART SM00487 24 227 1.5E-50 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS00275 dd7642a3736b655a1a765d66e05bccb1 447 Pfam PF00270 DEAD/DEAH box helicase 29 200 1.6E-46 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL549_RS00275 dd7642a3736b655a1a765d66e05bccb1 447 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL549_RS00275 dd7642a3736b655a1a765d66e05bccb1 447 Gene3D G3DSA:3.40.50.300 12 226 4.2E-56 T 28-03-2018 AL549_RS00275 dd7642a3736b655a1a765d66e05bccb1 447 Gene3D G3DSA:3.40.50.300 227 429 3.2E-44 T 28-03-2018 AL549_RS00275 dd7642a3736b655a1a765d66e05bccb1 447 SUPERFAMILY SSF52540 77 363 1.84E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS00275 dd7642a3736b655a1a765d66e05bccb1 447 Pfam PF00271 Helicase conserved C-terminal domain 240 345 8.3E-31 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS16905 366f0c8fdd6a24fe629126ac9cc19efa 116 PRINTS PR00332 Histidine triad family signature 6 22 1.1E-18 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AL549_RS16905 366f0c8fdd6a24fe629126ac9cc19efa 116 PRINTS PR00332 Histidine triad family signature 27 45 1.1E-18 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AL549_RS16905 366f0c8fdd6a24fe629126ac9cc19efa 116 PRINTS PR00332 Histidine triad family signature 95 105 1.1E-18 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AL549_RS16905 366f0c8fdd6a24fe629126ac9cc19efa 116 Pfam PF01230 HIT domain 12 108 1.2E-28 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AL549_RS16905 366f0c8fdd6a24fe629126ac9cc19efa 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 28-03-2018 IPR019808 Histidine triad, conserved site AL549_RS16905 366f0c8fdd6a24fe629126ac9cc19efa 116 SUPERFAMILY SSF54197 2 113 2.94E-34 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL549_RS16905 366f0c8fdd6a24fe629126ac9cc19efa 116 Gene3D G3DSA:3.30.428.10 1 110 1.8E-27 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL549_RS00235 c70b6a1a332dfe8759ac605af157bc01 273 Pfam PF12849 PBP superfamily domain 19 258 1.2E-40 T 28-03-2018 IPR024370 PBP domain AL549_RS00235 c70b6a1a332dfe8759ac605af157bc01 273 Gene3D G3DSA:3.40.190.10 24 146 1.4E-36 T 28-03-2018 AL549_RS00235 c70b6a1a332dfe8759ac605af157bc01 273 SUPERFAMILY SSF53850 16 273 9.92E-72 T 28-03-2018 AL549_RS00235 c70b6a1a332dfe8759ac605af157bc01 273 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 11 271 3.9E-77 T 28-03-2018 IPR011862 Phosphate binding protein GO:0006810 AL549_RS00235 c70b6a1a332dfe8759ac605af157bc01 273 Gene3D G3DSA:3.40.190.10 147 273 3.5E-22 T 28-03-2018 AL549_RS02385 0d2db9bf9f408903c2c5dbaaa51bed8e 209 Gene3D G3DSA:3.40.30.10 1 97 2.6E-15 T 28-03-2018 AL549_RS02385 0d2db9bf9f408903c2c5dbaaa51bed8e 209 Gene3D G3DSA:1.20.1050.10 98 209 1.6E-16 T 28-03-2018 AL549_RS02385 0d2db9bf9f408903c2c5dbaaa51bed8e 209 SUPERFAMILY SSF47616 77 208 1.36E-43 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL549_RS02385 0d2db9bf9f408903c2c5dbaaa51bed8e 209 Pfam PF04399 Glutaredoxin 2, C terminal domain 85 208 5.9E-36 T 28-03-2018 IPR007494 Glutaredoxin 2, C-terminal AL549_RS02385 0d2db9bf9f408903c2c5dbaaa51bed8e 209 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 208 2.1E-92 T 28-03-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 AL549_RS02385 0d2db9bf9f408903c2c5dbaaa51bed8e 209 SUPERFAMILY SSF52833 1 69 5.99E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS02385 0d2db9bf9f408903c2c5dbaaa51bed8e 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 7.9E-12 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL549_RS15905 655bcd8ae1934fb10ee9a0a105d6cbf9 422 Pfam PF01966 HD domain 248 369 6.6E-18 T 28-03-2018 IPR006674 HD domain AL549_RS15905 655bcd8ae1934fb10ee9a0a105d6cbf9 422 SUPERFAMILY SSF109604 25 193 2.16E-14 T 28-03-2018 AL549_RS15905 655bcd8ae1934fb10ee9a0a105d6cbf9 422 TIGRFAM TIGR00277 HDIG: HDIG domain 248 338 3.0E-7 T 28-03-2018 IPR006675 HDIG domain AL549_RS15905 655bcd8ae1934fb10ee9a0a105d6cbf9 422 SMART SM00471 30 159 21.0 T 28-03-2018 IPR003607 HD/PDEase domain AL549_RS15905 655bcd8ae1934fb10ee9a0a105d6cbf9 422 SMART SM00471 244 379 1.5E-10 T 28-03-2018 IPR003607 HD/PDEase domain AL549_RS15905 655bcd8ae1934fb10ee9a0a105d6cbf9 422 Gene3D G3DSA:1.10.3210.10 213 421 3.0E-38 T 28-03-2018 AL549_RS15905 655bcd8ae1934fb10ee9a0a105d6cbf9 422 Gene3D G3DSA:1.10.3210.10 24 197 9.9E-17 T 28-03-2018 AL549_RS15905 655bcd8ae1934fb10ee9a0a105d6cbf9 422 SUPERFAMILY SSF109604 238 409 2.92E-32 T 28-03-2018 AL549_RS20455 35e06e8beef44cf8bc9c3f4ce0632f17 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 2.2E-33 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type AL549_RS20455 35e06e8beef44cf8bc9c3f4ce0632f17 141 Pfam PF02082 Transcriptional regulator 1 82 5.3E-23 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type AL549_RS20455 35e06e8beef44cf8bc9c3f4ce0632f17 141 SUPERFAMILY SSF46785 2 131 2.6E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS20455 35e06e8beef44cf8bc9c3f4ce0632f17 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 47.021 T 28-03-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 AL549_RS20455 35e06e8beef44cf8bc9c3f4ce0632f17 141 Gene3D G3DSA:1.10.10.10 1 135 4.9E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS10265 390a312c209b180691b04c7f59914841 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 4.1E-19 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL549_RS10265 390a312c209b180691b04c7f59914841 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 5.4E-8 T 28-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AL549_RS10265 390a312c209b180691b04c7f59914841 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AL549_RS10265 390a312c209b180691b04c7f59914841 213 SMART SM00525 186 206 4.4E-5 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AL549_RS10265 390a312c209b180691b04c7f59914841 213 SMART SM00478 38 185 1.9E-56 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL549_RS10265 390a312c209b180691b04c7f59914841 213 Gene3D G3DSA:1.10.1670.10 118 213 4.6E-29 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AL549_RS10265 390a312c209b180691b04c7f59914841 213 Gene3D G3DSA:1.10.340.30 21 117 6.6E-23 T 28-03-2018 AL549_RS10265 390a312c209b180691b04c7f59914841 213 PIRSF PIRSF001435 1 211 3.5E-51 T 28-03-2018 AL549_RS10265 390a312c209b180691b04c7f59914841 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 5.2E-90 T 28-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AL549_RS10265 390a312c209b180691b04c7f59914841 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 28-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AL549_RS10265 390a312c209b180691b04c7f59914841 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 28-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AL549_RS10265 390a312c209b180691b04c7f59914841 213 SUPERFAMILY SSF48150 2 207 8.32E-72 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL549_RS10265 390a312c209b180691b04c7f59914841 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 38.303 T 28-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AL549_RS13935 f13a99f5c607ca9c80cfdbc2e29e71f0 149 Gene3D G3DSA:3.40.630.30 69 145 8.3E-13 T 28-03-2018 AL549_RS13935 f13a99f5c607ca9c80cfdbc2e29e71f0 149 Pfam PF13673 Acetyltransferase (GNAT) domain 46 149 3.0E-25 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS13935 f13a99f5c607ca9c80cfdbc2e29e71f0 149 Gene3D G3DSA:3.40.50.1980 1 68 0.0013 T 28-03-2018 AL549_RS13935 f13a99f5c607ca9c80cfdbc2e29e71f0 149 SUPERFAMILY SSF55729 1 147 6.03E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS16960 9c7afaadfa32481005798933f4ea2a2a 623 Gene3D G3DSA:1.10.287.950 389 593 4.9E-49 T 28-03-2018 AL549_RS16960 9c7afaadfa32481005798933f4ea2a2a 623 Gene3D G3DSA:1.10.287.950 286 388 2.1E-6 T 28-03-2018 AL549_RS16960 9c7afaadfa32481005798933f4ea2a2a 623 Gene3D G3DSA:3.30.450.20 160 271 6.2E-27 T 28-03-2018 AL549_RS16960 9c7afaadfa32481005798933f4ea2a2a 623 Gene3D G3DSA:3.30.450.20 63 159 6.1E-20 T 28-03-2018 AL549_RS16960 9c7afaadfa32481005798933f4ea2a2a 623 SUPERFAMILY SSF58104 314 621 1.7E-73 T 28-03-2018 AL549_RS16960 9c7afaadfa32481005798933f4ea2a2a 623 Pfam PF02743 Cache domain 38 254 2.2E-29 T 28-03-2018 IPR033479 Double Cache domain 1 AL549_RS16960 9c7afaadfa32481005798933f4ea2a2a 623 SUPERFAMILY SSF103190 98 184 5.76E-19 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL549_RS16960 9c7afaadfa32481005798933f4ea2a2a 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 423 589 1.5E-43 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS16960 9c7afaadfa32481005798933f4ea2a2a 623 Pfam PF00672 HAMP domain 293 343 1.3E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS16960 9c7afaadfa32481005798933f4ea2a2a 623 SMART SM00304 292 346 7.0E-12 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS16960 9c7afaadfa32481005798933f4ea2a2a 623 SMART SM00283 361 622 1.7E-72 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS12390 c64f07440b51b0b449360ab182229558 666 Gene3D G3DSA:3.30.750.44 155 245 8.4E-25 T 28-03-2018 AL549_RS12390 c64f07440b51b0b449360ab182229558 666 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 320 1.6E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL549_RS12390 c64f07440b51b0b449360ab182229558 666 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 197 547 2.2E-112 T 28-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AL549_RS12390 c64f07440b51b0b449360ab182229558 666 SMART SM00228 246 323 3.4E-8 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL549_RS12390 c64f07440b51b0b449360ab182229558 666 SUPERFAMILY SSF50156 217 337 2.23E-15 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL549_RS12390 c64f07440b51b0b449360ab182229558 666 Gene3D G3DSA:3.90.226.10 339 622 7.2E-56 T 28-03-2018 AL549_RS12390 c64f07440b51b0b449360ab182229558 666 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 530 662 8.6E-39 T 28-03-2018 IPR020992 Tail specific protease, C-terminal AL549_RS12390 c64f07440b51b0b449360ab182229558 666 Gene3D G3DSA:2.30.42.10 246 338 1.6E-13 T 28-03-2018 AL549_RS12390 c64f07440b51b0b449360ab182229558 666 Pfam PF03572 Peptidase family S41 356 525 1.5E-50 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL549_RS12390 c64f07440b51b0b449360ab182229558 666 SUPERFAMILY SSF52096 350 532 2.82E-72 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS12390 c64f07440b51b0b449360ab182229558 666 SUPERFAMILY SSF52096 165 264 2.82E-72 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS12390 c64f07440b51b0b449360ab182229558 666 Pfam PF08180 B melanoma antigen family 9 36 7.2E-13 T 28-03-2018 IPR012530 B melanoma antigen AL549_RS12390 c64f07440b51b0b449360ab182229558 666 SMART SM00245 326 527 8.5E-67 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL549_RS23580 f990a008ad4ab5b8419a4dd60d7c3ac3 126 SUPERFAMILY SSF110069 6 126 1.44E-46 T 28-03-2018 IPR007474 ApaG domain AL549_RS23580 f990a008ad4ab5b8419a4dd60d7c3ac3 126 Gene3D G3DSA:2.60.40.1470 1 126 1.6E-43 T 28-03-2018 IPR007474 ApaG domain AL549_RS23580 f990a008ad4ab5b8419a4dd60d7c3ac3 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.663 T 28-03-2018 IPR023065 Uncharacterised protein family ApaG AL549_RS23580 f990a008ad4ab5b8419a4dd60d7c3ac3 126 Pfam PF04379 ApaG domain 18 103 1.1E-32 T 28-03-2018 IPR007474 ApaG domain AL549_RS22685 1be32a0fb481c306765a4a95ff9fd00c 144 Pfam PF06146 Phosphate-starvation-inducible E 54 120 2.7E-13 T 28-03-2018 IPR020948 Phosphate-starvation-induced PsiE-like AL549_RS22685 1be32a0fb481c306765a4a95ff9fd00c 144 PIRSF PIRSF029598 6 138 3.1E-40 T 28-03-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 AL549_RS09000 c716f963504768350ae940e5363e163f 419 PIRSF PIRSF000445 1 419 9.1E-158 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL549_RS09000 c716f963504768350ae940e5363e163f 419 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 1.1E-52 T 28-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL549_RS09000 c716f963504768350ae940e5363e163f 419 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.855 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL549_RS09000 c716f963504768350ae940e5363e163f 419 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 7.8E-145 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL549_RS09000 c716f963504768350ae940e5363e163f 419 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 413 1.8E-23 T 28-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL549_RS09000 c716f963504768350ae940e5363e163f 419 SUPERFAMILY SSF69075 315 416 7.45E-28 T 28-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL549_RS09000 c716f963504768350ae940e5363e163f 419 Gene3D G3DSA:3.40.50.720 159 311 7.5E-23 T 28-03-2018 AL549_RS09000 c716f963504768350ae940e5363e163f 419 SUPERFAMILY SSF51735 160 313 1.1E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS09000 c716f963504768350ae940e5363e163f 419 Gene3D G3DSA:1.10.1200.70 330 416 2.2E-22 T 28-03-2018 AL549_RS09000 c716f963504768350ae940e5363e163f 419 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 2.3E-50 T 28-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AL549_RS09000 c716f963504768350ae940e5363e163f 419 SUPERFAMILY SSF69742 1 156 1.96E-48 T 28-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL549_RS09000 c716f963504768350ae940e5363e163f 419 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 28-03-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL549_RS01595 18b8f9887731f8705909f5ab66c84748 739 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 641 738 5.5E-16 T 28-03-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AL549_RS01595 18b8f9887731f8705909f5ab66c84748 739 SUPERFAMILY SSF51445 192 629 9.34E-109 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS01595 18b8f9887731f8705909f5ab66c84748 739 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 129 735 4.7E-245 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 AL549_RS01595 18b8f9887731f8705909f5ab66c84748 739 Gene3D G3DSA:2.60.40.10 129 246 2.9E-27 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS01595 18b8f9887731f8705909f5ab66c84748 739 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 146 220 5.2E-20 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 AL549_RS01595 18b8f9887731f8705909f5ab66c84748 739 Gene3D G3DSA:3.20.20.80 251 646 1.5E-76 T 28-03-2018 AL549_RS01595 18b8f9887731f8705909f5ab66c84748 739 PIRSF PIRSF000463 22 739 1.6E-278 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 AL549_RS01595 18b8f9887731f8705909f5ab66c84748 739 Gene3D G3DSA:2.60.40.10 17 116 1.2E-9 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS01595 18b8f9887731f8705909f5ab66c84748 739 SUPERFAMILY SSF81296 131 239 1.14E-23 T 28-03-2018 IPR014756 Immunoglobulin E-set AL549_RS01595 18b8f9887731f8705909f5ab66c84748 739 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 104 739 41.012 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 AL549_RS01595 18b8f9887731f8705909f5ab66c84748 739 Gene3D G3DSA:2.60.40.1180 647 739 1.3E-25 T 28-03-2018 AL549_RS01595 18b8f9887731f8705909f5ab66c84748 739 SUPERFAMILY SSF51011 636 738 7.79E-26 T 28-03-2018 AL549_RS01595 18b8f9887731f8705909f5ab66c84748 739 SUPERFAMILY SSF81296 35 118 1.1E-11 T 28-03-2018 IPR014756 Immunoglobulin E-set AL549_RS01595 18b8f9887731f8705909f5ab66c84748 739 Pfam PF00128 Alpha amylase, catalytic domain 288 362 2.5E-6 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS01595 18b8f9887731f8705909f5ab66c84748 739 SMART SM00642 263 608 2.5E-6 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS07075 f3aa389a4399825707076171e2f3aea5 289 SUPERFAMILY SSF46689 6 57 8.96E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS07075 f3aa389a4399825707076171e2f3aea5 289 Gene3D G3DSA:1.10.10.60 61 110 8.8E-13 T 28-03-2018 AL549_RS07075 f3aa389a4399825707076171e2f3aea5 289 SUPERFAMILY SSF46689 60 108 1.52E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS07075 f3aa389a4399825707076171e2f3aea5 289 SUPERFAMILY SSF55136 138 286 1.43E-27 T 28-03-2018 AL549_RS07075 f3aa389a4399825707076171e2f3aea5 289 Gene3D G3DSA:1.10.10.60 1 60 4.9E-13 T 28-03-2018 AL549_RS07075 f3aa389a4399825707076171e2f3aea5 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 103 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL549_RS07075 f3aa389a4399825707076171e2f3aea5 289 Gene3D G3DSA:3.20.80.10 135 287 8.7E-23 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain AL549_RS07075 f3aa389a4399825707076171e2f3aea5 289 SMART SM00342 23 107 1.5E-30 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS07075 f3aa389a4399825707076171e2f3aea5 289 Pfam PF06445 GyrI-like small molecule binding domain 138 286 1.3E-30 T 28-03-2018 IPR029442 GyrI-like small molecule binding domain AL549_RS07075 f3aa389a4399825707076171e2f3aea5 289 Pfam PF12833 Helix-turn-helix domain 29 107 2.1E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS07075 f3aa389a4399825707076171e2f3aea5 289 SMART SM00871 137 287 4.7E-21 T 28-03-2018 IPR010499 Bacterial transcription activator, effector binding AL549_RS07075 f3aa389a4399825707076171e2f3aea5 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 1.8E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS07075 f3aa389a4399825707076171e2f3aea5 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 1.8E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS04365 a0cf1bd699fe9dd0e3994d11bc084db5 823 Gene3D G3DSA:3.20.20.80 163 665 1.4E-121 T 28-03-2018 AL549_RS04365 a0cf1bd699fe9dd0e3994d11bc084db5 823 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 165 604 2.8E-119 T 28-03-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL549_RS04365 a0cf1bd699fe9dd0e3994d11bc084db5 823 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 30 162 1.5E-14 T 28-03-2018 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL549_RS04365 a0cf1bd699fe9dd0e3994d11bc084db5 823 SUPERFAMILY SSF51445 529 617 6.21E-102 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS04365 a0cf1bd699fe9dd0e3994d11bc084db5 823 SUPERFAMILY SSF51445 165 424 6.21E-102 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS04365 a0cf1bd699fe9dd0e3994d11bc084db5 823 Gene3D G3DSA:3.30.379.10 24 162 5.8E-27 T 28-03-2018 AL549_RS04365 a0cf1bd699fe9dd0e3994d11bc084db5 823 PRINTS PR00738 Glycosyl hydrolase family 20 signature 188 209 1.7E-40 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS04365 a0cf1bd699fe9dd0e3994d11bc084db5 823 PRINTS PR00738 Glycosyl hydrolase family 20 signature 290 308 1.7E-40 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS04365 a0cf1bd699fe9dd0e3994d11bc084db5 823 PRINTS PR00738 Glycosyl hydrolase family 20 signature 159 176 1.7E-40 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS04365 a0cf1bd699fe9dd0e3994d11bc084db5 823 PRINTS PR00738 Glycosyl hydrolase family 20 signature 312 325 1.7E-40 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS04365 a0cf1bd699fe9dd0e3994d11bc084db5 823 PRINTS PR00738 Glycosyl hydrolase family 20 signature 124 144 1.7E-40 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS04365 a0cf1bd699fe9dd0e3994d11bc084db5 823 PRINTS PR00738 Glycosyl hydrolase family 20 signature 240 257 1.7E-40 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS04365 a0cf1bd699fe9dd0e3994d11bc084db5 823 SUPERFAMILY SSF55545 30 164 5.63E-29 T 28-03-2018 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS04905 b48bee2cb4ff1c9707cacd7b38143eb6 543 SMART SM00283 280 541 8.3E-73 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS04905 b48bee2cb4ff1c9707cacd7b38143eb6 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 505 1.6E-40 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS04905 b48bee2cb4ff1c9707cacd7b38143eb6 543 SMART SM00304 211 265 1.3E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS04905 b48bee2cb4ff1c9707cacd7b38143eb6 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 170 1.3E-18 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL549_RS04905 b48bee2cb4ff1c9707cacd7b38143eb6 543 Gene3D G3DSA:1.10.287.950 319 543 2.9E-56 T 28-03-2018 AL549_RS04905 b48bee2cb4ff1c9707cacd7b38143eb6 543 SUPERFAMILY SSF58104 234 542 3.01E-72 T 28-03-2018 AL549_RS04905 b48bee2cb4ff1c9707cacd7b38143eb6 543 Gene3D G3DSA:1.10.287.850 238 318 0.075 T 28-03-2018 AL549_RS04905 b48bee2cb4ff1c9707cacd7b38143eb6 543 Gene3D G3DSA:1.20.120.30 24 184 8.3E-8 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AL549_RS20735 b105bd89f91e36351fa9bb4fcd252f1a 227 Pfam PF00072 Response regulator receiver domain 4 112 7.2E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS20735 b105bd89f91e36351fa9bb4fcd252f1a 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 224 6.4E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS20735 b105bd89f91e36351fa9bb4fcd252f1a 227 SUPERFAMILY SSF52172 1 123 3.27E-39 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS20735 b105bd89f91e36351fa9bb4fcd252f1a 227 SUPERFAMILY SSF46894 125 225 1.33E-23 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS20735 b105bd89f91e36351fa9bb4fcd252f1a 227 Gene3D G3DSA:3.40.50.2300 1 121 1.9E-35 T 28-03-2018 AL549_RS20735 b105bd89f91e36351fa9bb4fcd252f1a 227 SMART SM00862 148 224 1.8E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS20735 b105bd89f91e36351fa9bb4fcd252f1a 227 Gene3D G3DSA:1.10.10.10 122 227 1.6E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS20735 b105bd89f91e36351fa9bb4fcd252f1a 227 SMART SM00448 2 111 1.0E-44 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS06875 e5e5f64948c0256d6bd0b75201c7acdf 360 Pfam PF07995 Glucose / Sorbosone dehydrogenase 35 355 7.1E-110 T 28-03-2018 IPR012938 Glucose/Sorbosone dehydrogenase AL549_RS06875 e5e5f64948c0256d6bd0b75201c7acdf 360 Gene3D G3DSA:2.120.10.30 263 359 2.7E-10 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL549_RS06875 e5e5f64948c0256d6bd0b75201c7acdf 360 Gene3D G3DSA:2.120.10.30 17 262 1.5E-43 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL549_RS06875 e5e5f64948c0256d6bd0b75201c7acdf 360 SUPERFAMILY SSF50952 21 354 2.75E-39 T 28-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AL549_RS16080 2c677f92b8404ef908229909ace06f3d 468 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 9.1E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS16080 2c677f92b8404ef908229909ace06f3d 468 Gene3D G3DSA:3.90.1150.10 55 104 0.26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS16080 2c677f92b8404ef908229909ace06f3d 468 SMART SM00345 7 66 5.4E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS16080 2c677f92b8404ef908229909ace06f3d 468 Gene3D G3DSA:3.40.640.10 118 368 7.7E-50 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS16080 2c677f92b8404ef908229909ace06f3d 468 SUPERFAMILY SSF53383 81 463 4.39E-95 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS16080 2c677f92b8404ef908229909ace06f3d 468 Gene3D G3DSA:3.90.1150.10 369 465 2.0E-24 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS16080 2c677f92b8404ef908229909ace06f3d 468 Pfam PF00155 Aminotransferase class I and II 133 447 2.3E-33 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL549_RS16080 2c677f92b8404ef908229909ace06f3d 468 SUPERFAMILY SSF46785 1 68 8.17E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS16080 2c677f92b8404ef908229909ace06f3d 468 Gene3D G3DSA:1.10.10.10 1 54 1.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS07660 bdc045b1d11875762828cc1eda7c8bd7 489 Gene3D G3DSA:3.40.50.720 145 241 3.8E-19 T 28-03-2018 AL549_RS07660 bdc045b1d11875762828cc1eda7c8bd7 489 SUPERFAMILY SSF46548 2 155 4.08E-36 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL549_RS07660 bdc045b1d11875762828cc1eda7c8bd7 489 Gene3D G3DSA:1.10.1060.10 9 144 2.2E-39 T 28-03-2018 AL549_RS07660 bdc045b1d11875762828cc1eda7c8bd7 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 145 459 2.2E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS07660 bdc045b1d11875762828cc1eda7c8bd7 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 1.1E-23 T 28-03-2018 AL549_RS07660 bdc045b1d11875762828cc1eda7c8bd7 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 1.1E-23 T 28-03-2018 AL549_RS07660 bdc045b1d11875762828cc1eda7c8bd7 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 1.1E-23 T 28-03-2018 AL549_RS07660 bdc045b1d11875762828cc1eda7c8bd7 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 1.1E-23 T 28-03-2018 AL549_RS07660 bdc045b1d11875762828cc1eda7c8bd7 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 2.7E-24 T 28-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AL549_RS07660 bdc045b1d11875762828cc1eda7c8bd7 489 Gene3D G3DSA:3.50.50.60 331 407 2.3E-5 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS07660 bdc045b1d11875762828cc1eda7c8bd7 489 Gene3D G3DSA:3.50.50.60 242 330 2.2E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS07660 bdc045b1d11875762828cc1eda7c8bd7 489 SUPERFAMILY SSF51971 143 407 1.0E-66 T 28-03-2018 AL549_RS07660 bdc045b1d11875762828cc1eda7c8bd7 489 Gene3D G3DSA:3.50.50.60 408 486 1.9E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS07660 bdc045b1d11875762828cc1eda7c8bd7 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 2.9E-200 T 28-03-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 AL549_RS09265 c7bc28d6cbbf7a4a5c3228a9f71d0f7f 151 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 147 8.2E-24 T 28-03-2018 IPR002810 NfeD-like, C-terminal domain AL549_RS09265 c7bc28d6cbbf7a4a5c3228a9f71d0f7f 151 Gene3D G3DSA:2.40.50.140 80 151 7.8E-13 T 28-03-2018 AL549_RS09265 c7bc28d6cbbf7a4a5c3228a9f71d0f7f 151 SUPERFAMILY SSF141322 91 147 9.15E-6 T 28-03-2018 AL549_RS08350 54d5362ae10c5a864c69311e332d2170 513 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS08350 54d5362ae10c5a864c69311e332d2170 513 Pfam PF01235 Sodium:alanine symporter family 51 471 8.9E-150 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS08350 54d5362ae10c5a864c69311e332d2170 513 PRINTS PR00175 Sodium/alanine symporter signature 217 236 1.8E-57 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS08350 54d5362ae10c5a864c69311e332d2170 513 PRINTS PR00175 Sodium/alanine symporter signature 189 207 1.8E-57 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS08350 54d5362ae10c5a864c69311e332d2170 513 PRINTS PR00175 Sodium/alanine symporter signature 304 322 1.8E-57 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS08350 54d5362ae10c5a864c69311e332d2170 513 PRINTS PR00175 Sodium/alanine symporter signature 363 385 1.8E-57 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS08350 54d5362ae10c5a864c69311e332d2170 513 PRINTS PR00175 Sodium/alanine symporter signature 426 446 1.8E-57 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS08350 54d5362ae10c5a864c69311e332d2170 513 PRINTS PR00175 Sodium/alanine symporter signature 86 108 1.8E-57 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS08350 54d5362ae10c5a864c69311e332d2170 513 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 460 7.5E-135 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS20400 22b511cefdb909b56a9730f056a5521b 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 9.9E-230 T 28-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AL549_RS20400 22b511cefdb909b56a9730f056a5521b 485 Gene3D G3DSA:3.40.309.10 259 442 1.2E-43 T 28-03-2018 AL549_RS20400 22b511cefdb909b56a9730f056a5521b 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL549_RS20400 22b511cefdb909b56a9730f056a5521b 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 56.944 T 28-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AL549_RS20400 22b511cefdb909b56a9730f056a5521b 485 Gene3D G3DSA:3.40.605.10 1 258 1.2E-76 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL549_RS20400 22b511cefdb909b56a9730f056a5521b 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 2.2E-121 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL549_RS20400 22b511cefdb909b56a9730f056a5521b 485 SUPERFAMILY SSF53720 3 449 1.7E-123 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL549_RS20400 22b511cefdb909b56a9730f056a5521b 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL549_RS12535 18a9677a861c5351ed77f5a56f17bae6 248 SUPERFAMILY SSF51206 23 162 2.36E-31 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AL549_RS12535 18a9677a861c5351ed77f5a56f17bae6 248 Gene3D G3DSA:1.10.10.10 166 248 5.7E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS12535 18a9677a861c5351ed77f5a56f17bae6 248 SMART SM00419 187 235 4.3E-15 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL549_RS12535 18a9677a861c5351ed77f5a56f17bae6 248 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 2.1E-17 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL549_RS12535 18a9677a861c5351ed77f5a56f17bae6 248 SMART SM00100 30 151 2.4E-20 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL549_RS12535 18a9677a861c5351ed77f5a56f17bae6 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.5E-11 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL549_RS12535 18a9677a861c5351ed77f5a56f17bae6 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.5E-11 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL549_RS12535 18a9677a861c5351ed77f5a56f17bae6 248 SUPERFAMILY SSF46785 165 244 2.93E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS12535 18a9677a861c5351ed77f5a56f17bae6 248 Gene3D G3DSA:2.60.120.10 24 165 9.8E-20 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS12535 18a9677a861c5351ed77f5a56f17bae6 248 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 28-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AL549_RS12535 18a9677a861c5351ed77f5a56f17bae6 248 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 6.4E-15 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL549_RS03440 94cb76dbb7bc0100311f22aaa5bac213 589 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 565 585 5.6E-6 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS03440 94cb76dbb7bc0100311f22aaa5bac213 589 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 548 565 5.6E-6 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS03440 94cb76dbb7bc0100311f22aaa5bac213 589 Gene3D G3DSA:1.10.8.60 455 520 5.0E-13 T 28-03-2018 AL549_RS03440 94cb76dbb7bc0100311f22aaa5bac213 589 SUPERFAMILY SSF52540 284 510 3.22E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS03440 94cb76dbb7bc0100311f22aaa5bac213 589 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 304 317 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL549_RS03440 94cb76dbb7bc0100311f22aaa5bac213 589 Gene3D G3DSA:3.30.450.40 13 183 5.8E-4 T 28-03-2018 IPR029016 GAF domain-like AL549_RS03440 94cb76dbb7bc0100311f22aaa5bac213 589 Pfam PF01590 GAF domain 93 185 1.1E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL549_RS03440 94cb76dbb7bc0100311f22aaa5bac213 589 SUPERFAMILY SSF46689 489 584 6.4E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS03440 94cb76dbb7bc0100311f22aaa5bac213 589 Pfam PF02954 Bacterial regulatory protein, Fis family 555 580 1.1E-8 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS03440 94cb76dbb7bc0100311f22aaa5bac213 589 Pfam PF00158 Sigma-54 interaction domain 285 447 2.4E-60 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL549_RS03440 94cb76dbb7bc0100311f22aaa5bac213 589 Gene3D G3DSA:3.40.50.300 289 452 4.9E-23 T 28-03-2018 AL549_RS03440 94cb76dbb7bc0100311f22aaa5bac213 589 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 367 382 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL549_RS03440 94cb76dbb7bc0100311f22aaa5bac213 589 SMART SM00382 300 444 5.4E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS03440 94cb76dbb7bc0100311f22aaa5bac213 589 Gene3D G3DSA:3.30.450.20 184 288 0.09 T 28-03-2018 AL549_RS03440 94cb76dbb7bc0100311f22aaa5bac213 589 Gene3D G3DSA:1.10.10.60 521 584 3.0E-13 T 28-03-2018 AL549_RS09885 331f5a381eb6d3539c5f4401bb9cb7a5 439 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 436 1.7E-128 T 28-03-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 AL549_RS09885 331f5a381eb6d3539c5f4401bb9cb7a5 439 Pfam PF13286 Phosphohydrolase-associated domain 346 433 5.1E-26 T 28-03-2018 IPR026875 Phosphohydrolase-associated domain AL549_RS09885 331f5a381eb6d3539c5f4401bb9cb7a5 439 SMART SM00471 58 264 2.1E-8 T 28-03-2018 IPR003607 HD/PDEase domain AL549_RS09885 331f5a381eb6d3539c5f4401bb9cb7a5 439 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 1 435 34.182 T 28-03-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 AL549_RS09885 331f5a381eb6d3539c5f4401bb9cb7a5 439 SUPERFAMILY SSF109604 232 437 3.58E-79 T 28-03-2018 AL549_RS09885 331f5a381eb6d3539c5f4401bb9cb7a5 439 SUPERFAMILY SSF109604 19 167 3.58E-79 T 28-03-2018 AL549_RS09885 331f5a381eb6d3539c5f4401bb9cb7a5 439 Gene3D G3DSA:1.10.3210.10 15 439 3.0E-85 T 28-03-2018 AL549_RS09885 331f5a381eb6d3539c5f4401bb9cb7a5 439 Pfam PF01966 HD domain 62 146 4.8E-8 T 28-03-2018 IPR006674 HD domain AL549_RS08605 0ce473eeeac3bec26624c99b6b15dcef 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 2 129 31.402 T 28-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 AL549_RS08605 0ce473eeeac3bec26624c99b6b15dcef 129 Pfam PF07417 Transcriptional regulator Crl 6 123 1.3E-47 T 28-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 AL549_RS10530 9488790c0912f66bedda213bedf39842 414 SUPERFAMILY SSF51735 3 178 1.36E-16 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS10530 9488790c0912f66bedda213bedf39842 414 Gene3D G3DSA:3.40.50.720 1 129 1.2E-9 T 28-03-2018 AL549_RS10530 9488790c0912f66bedda213bedf39842 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 392 9.9E-30 T 28-03-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 AL549_RS10530 9488790c0912f66bedda213bedf39842 414 Gene3D G3DSA:3.30.360.10 150 343 2.2E-53 T 28-03-2018 AL549_RS10530 9488790c0912f66bedda213bedf39842 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 2.0E-34 T 28-03-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AL549_RS04050 afb15242eb4674d732531d1e7f945315 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 6.4E-59 T 28-03-2018 AL549_RS04050 afb15242eb4674d732531d1e7f945315 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.4E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04050 afb15242eb4674d732531d1e7f945315 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.4E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04050 afb15242eb4674d732531d1e7f945315 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.4E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04050 afb15242eb4674d732531d1e7f945315 246 Gene3D G3DSA:3.40.50.720 2 246 5.5E-70 T 28-03-2018 AL549_RS04050 afb15242eb4674d732531d1e7f945315 246 SUPERFAMILY SSF51735 2 245 1.36E-78 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS04050 afb15242eb4674d732531d1e7f945315 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL549_RS04050 afb15242eb4674d732531d1e7f945315 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.1E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04050 afb15242eb4674d732531d1e7f945315 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.1E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04050 afb15242eb4674d732531d1e7f945315 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.1E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04050 afb15242eb4674d732531d1e7f945315 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.1E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04050 afb15242eb4674d732531d1e7f945315 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.1E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04050 afb15242eb4674d732531d1e7f945315 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.1E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04050 afb15242eb4674d732531d1e7f945315 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 188 0.0011 T 28-03-2018 AL549_RS04050 afb15242eb4674d732531d1e7f945315 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 6.9E-117 T 28-03-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216 AL549_RS06065 e23867b1bde5a1712ec7a2f9a4c7db4a 326 SUPERFAMILY SSF53822 61 313 1.06E-39 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS06065 e23867b1bde5a1712ec7a2f9a4c7db4a 326 Gene3D G3DSA:3.40.50.2300 177 308 3.8E-14 T 28-03-2018 AL549_RS06065 e23867b1bde5a1712ec7a2f9a4c7db4a 326 Gene3D G3DSA:1.10.260.40 1 56 1.5E-18 T 28-03-2018 AL549_RS06065 e23867b1bde5a1712ec7a2f9a4c7db4a 326 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 211 4.3E-14 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AL549_RS06065 e23867b1bde5a1712ec7a2f9a4c7db4a 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 1.6E-16 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS06065 e23867b1bde5a1712ec7a2f9a4c7db4a 326 Gene3D G3DSA:3.40.50.2300 57 176 5.7E-25 T 28-03-2018 AL549_RS06065 e23867b1bde5a1712ec7a2f9a4c7db4a 326 SUPERFAMILY SSF47413 1 58 9.21E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS06065 e23867b1bde5a1712ec7a2f9a4c7db4a 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 28-03-2018 AL549_RS06065 e23867b1bde5a1712ec7a2f9a4c7db4a 326 SMART SM00354 1 73 8.2E-25 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS06065 e23867b1bde5a1712ec7a2f9a4c7db4a 326 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 325 1.1E-139 T 28-03-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 AL549_RS20670 49314cb71613e1ee67e151d97df294f2 127 Gene3D G3DSA:1.20.1300.10 2 127 3.4E-51 T 28-03-2018 AL549_RS20670 49314cb71613e1ee67e151d97df294f2 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 1.0E-64 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AL549_RS20670 49314cb71613e1ee67e151d97df294f2 127 SUPERFAMILY SSF81343 1 127 4.14E-52 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS20670 49314cb71613e1ee67e151d97df294f2 127 PIRSF PIRSF000180 1 127 6.0E-58 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AL549_RS20670 49314cb71613e1ee67e151d97df294f2 127 Pfam PF02300 Fumarate reductase subunit C 2 127 7.1E-49 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AL549_RS20670 49314cb71613e1ee67e151d97df294f2 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.991 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AL549_RS18290 99f7fc9685fdfab8d1162a5a73190403 301 SUPERFAMILY SSF53850 93 298 2.31E-36 T 28-03-2018 AL549_RS18290 99f7fc9685fdfab8d1162a5a73190403 301 Gene3D G3DSA:3.40.190.10 93 301 4.7E-17 T 28-03-2018 AL549_RS18290 99f7fc9685fdfab8d1162a5a73190403 301 SUPERFAMILY SSF46785 6 84 8.16E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS18290 99f7fc9685fdfab8d1162a5a73190403 301 Gene3D G3DSA:1.10.10.10 4 85 5.5E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS18290 99f7fc9685fdfab8d1162a5a73190403 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 6.6E-12 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS18290 99f7fc9685fdfab8d1162a5a73190403 301 Pfam PF03466 LysR substrate binding domain 97 296 1.0E-24 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS15545 5e498b6deaf65c5ff035b103f8183ae3 311 TIGRFAM TIGR01230 agmatinase: agmatinase 26 299 2.8E-92 T 28-03-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 AL549_RS15545 5e498b6deaf65c5ff035b103f8183ae3 311 SUPERFAMILY SSF52768 12 303 8.82E-94 T 28-03-2018 AL549_RS15545 5e498b6deaf65c5ff035b103f8183ae3 311 Pfam PF00491 Arginase family 33 298 1.4E-88 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL549_RS15545 5e498b6deaf65c5ff035b103f8183ae3 311 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 28-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AL549_RS15545 5e498b6deaf65c5ff035b103f8183ae3 311 PIRSF PIRSF036979 12 305 3.5E-95 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL549_RS15545 5e498b6deaf65c5ff035b103f8183ae3 311 Gene3D G3DSA:3.40.800.10 4 308 1.8E-97 T 28-03-2018 AL549_RS17195 8fc8e5f9c5c72b071078fb14020ba203 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 8.9E-140 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS17195 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-38 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS17195 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-38 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS17195 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-38 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS17195 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-38 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS17195 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-38 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS17195 8fc8e5f9c5c72b071078fb14020ba203 308 Gene3D G3DSA:3.90.226.10 12 287 2.7E-67 T 28-03-2018 AL549_RS17195 8fc8e5f9c5c72b071078fb14020ba203 308 Pfam PF01039 Carboxyl transferase domain 99 240 1.1E-14 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 AL549_RS17195 8fc8e5f9c5c72b071078fb14020ba203 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.393 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS17195 8fc8e5f9c5c72b071078fb14020ba203 308 SUPERFAMILY SSF52096 25 282 2.36E-85 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS20605 e7a64e4a9e331bade9e35d9c135fc5ea 510 SUPERFAMILY SSF53649 313 509 1.7E-75 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS20605 e7a64e4a9e331bade9e35d9c135fc5ea 510 SUPERFAMILY SSF53649 4 78 1.7E-75 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS20605 e7a64e4a9e331bade9e35d9c135fc5ea 510 Gene3D G3DSA:3.40.720.10 296 510 3.0E-38 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS20605 e7a64e4a9e331bade9e35d9c135fc5ea 510 SUPERFAMILY SSF64158 78 308 9.94E-80 T 28-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS20605 e7a64e4a9e331bade9e35d9c135fc5ea 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 509 6.6E-227 T 28-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS20605 e7a64e4a9e331bade9e35d9c135fc5ea 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.154 T 28-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS20605 e7a64e4a9e331bade9e35d9c135fc5ea 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 3.7E-78 T 28-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS20605 e7a64e4a9e331bade9e35d9c135fc5ea 510 PIRSF PIRSF001492 1 510 6.6E-202 T 28-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS20605 e7a64e4a9e331bade9e35d9c135fc5ea 510 Gene3D G3DSA:3.40.1450.10 78 295 3.2E-90 T 28-03-2018 AL549_RS20605 e7a64e4a9e331bade9e35d9c135fc5ea 510 Pfam PF01676 Metalloenzyme superfamily 5 498 1.6E-80 T 28-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AL549_RS03810 8c412838bb4f4f609033b30b8d1763bc 678 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 6 401 1.3E-116 T 28-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AL549_RS03810 8c412838bb4f4f609033b30b8d1763bc 678 SUPERFAMILY SSF53474 411 652 1.19E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS03810 8c412838bb4f4f609033b30b8d1763bc 678 Gene3D G3DSA:3.40.50.1820 181 675 1.8E-63 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS03810 8c412838bb4f4f609033b30b8d1763bc 678 Gene3D G3DSA:3.40.50.1820 1 158 2.9E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS03810 8c412838bb4f4f609033b30b8d1763bc 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 527 547 5.0E-61 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL549_RS03810 8c412838bb4f4f609033b30b8d1763bc 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 602 624 5.0E-61 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL549_RS03810 8c412838bb4f4f609033b30b8d1763bc 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 443 461 5.0E-61 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL549_RS03810 8c412838bb4f4f609033b30b8d1763bc 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 516 5.0E-61 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL549_RS03810 8c412838bb4f4f609033b30b8d1763bc 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 583 598 5.0E-61 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL549_RS03810 8c412838bb4f4f609033b30b8d1763bc 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 469 493 5.0E-61 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL549_RS03810 8c412838bb4f4f609033b30b8d1763bc 678 Pfam PF00326 Prolyl oligopeptidase family 459 673 3.9E-68 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AL549_RS03810 8c412838bb4f4f609033b30b8d1763bc 678 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 504 534 - T 28-03-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 AL549_RS03810 8c412838bb4f4f609033b30b8d1763bc 678 SUPERFAMILY SSF50993 2 407 2.88E-94 T 28-03-2018 AL549_RS07120 b89acdf7de3956db049c5d2e2c2bddcc 228 SUPERFAMILY SSF46785 1 61 2.18E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS07120 b89acdf7de3956db049c5d2e2c2bddcc 228 Pfam PF08279 HTH domain 6 59 6.3E-17 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 AL549_RS07120 b89acdf7de3956db049c5d2e2c2bddcc 228 Pfam PF13280 WYL domain 140 225 2.5E-18 T 28-03-2018 IPR026881 WYL domain AL549_RS07120 b89acdf7de3956db049c5d2e2c2bddcc 228 Gene3D G3DSA:1.10.10.10 1 64 1.6E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS04625 fadc0be61695b2717c228227576d3de7 136 Gene3D G3DSA:1.10.260.40 4 114 2.1E-6 T 28-03-2018 AL549_RS04625 fadc0be61695b2717c228227576d3de7 136 SUPERFAMILY SSF47413 2 61 2.29E-5 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS16950 4f2cfda0845dbec50c64505016bead38 526 Gene3D G3DSA:1.10.10.10 4 106 7.8E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS16950 4f2cfda0845dbec50c64505016bead38 526 Gene3D G3DSA:1.25.40.10 133 497 3.4E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS16950 4f2cfda0845dbec50c64505016bead38 526 SUPERFAMILY SSF46894 6 103 1.28E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS16950 4f2cfda0845dbec50c64505016bead38 526 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 1.1E-15 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS16950 4f2cfda0845dbec50c64505016bead38 526 SMART SM00862 24 100 1.2E-13 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS03775 17b42b07757448ba43f00235d3c354a8 251 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 70 8.0E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL549_RS03775 17b42b07757448ba43f00235d3c354a8 251 SUPERFAMILY SSF47413 7 69 8.91E-6 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS03775 17b42b07757448ba43f00235d3c354a8 251 Gene3D G3DSA:1.10.260.40 5 93 8.1E-6 T 28-03-2018 AL549_RS03775 17b42b07757448ba43f00235d3c354a8 251 Gene3D G3DSA:1.10.10.10 96 150 0.017 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 SUPERFAMILY SSF50677 191 365 1.44E-58 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 SUPERFAMILY SSF46589 884 948 6.8E-19 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 Gene3D G3DSA:1.10.287.380 877 947 6.6E-28 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 SUPERFAMILY SSF52374 364 571 1.99E-135 T 28-03-2018 AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 SUPERFAMILY SSF52374 1 192 1.99E-135 T 28-03-2018 AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 SUPERFAMILY SSF52374 609 641 1.99E-135 T 28-03-2018 AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 1.3E-226 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 Gene3D G3DSA:3.40.50.620 2 630 3.1E-135 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 932 0.0 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 949 16.073 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 Gene3D G3DSA:1.10.730.10 631 817 1.7E-49 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 Pfam PF08264 Anticodon-binding domain of tRNA 674 826 6.2E-40 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 4.1E-34 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 4.1E-34 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 4.1E-34 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 4.1E-34 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 4.1E-34 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 SUPERFAMILY SSF47323 642 898 2.8E-67 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS19655 66f3a36558df75918ffb862c58047d5e 951 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 884 944 3.4E-19 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AL549_RS21175 8c1c7eca1d017aa3da3611961167a6bc 106 SUPERFAMILY SSF52821 1 105 1.96E-28 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS21175 8c1c7eca1d017aa3da3611961167a6bc 106 Pfam PF00581 Rhodanese-like domain 13 98 4.4E-11 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS21175 8c1c7eca1d017aa3da3611961167a6bc 106 Gene3D G3DSA:3.40.250.10 4 106 7.6E-24 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS21175 8c1c7eca1d017aa3da3611961167a6bc 106 SMART SM00450 7 102 2.2E-17 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS21175 8c1c7eca1d017aa3da3611961167a6bc 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 32.601 T 28-03-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AL549_RS17865 90ab4158aba06a303f45297e7fa369e4 104 SUPERFAMILY SSF158452 1 102 6.15E-33 T 28-03-2018 IPR023376 YqcC-like domain AL549_RS17865 90ab4158aba06a303f45297e7fa369e4 104 Gene3D G3DSA:1.20.1440.40 3 102 5.0E-31 T 28-03-2018 IPR023376 YqcC-like domain AL549_RS17865 90ab4158aba06a303f45297e7fa369e4 104 PIRSF PIRSF006257 1 104 8.3E-41 T 28-03-2018 IPR007384 Protein of unknown function UCP006257 AL549_RS17865 90ab4158aba06a303f45297e7fa369e4 104 Pfam PF04287 tRNA pseudouridine synthase C 8 101 5.1E-31 T 28-03-2018 IPR023376 YqcC-like domain AL549_RS08755 05e6f51bcb06ba1f20cb4aa743810a41 225 SUPERFAMILY SSF161098 15 210 8.9E-48 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS08755 05e6f51bcb06ba1f20cb4aa743810a41 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 1.1E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS08755 05e6f51bcb06ba1f20cb4aa743810a41 225 Gene3D G3DSA:1.10.3720.10 12 225 1.7E-40 T 28-03-2018 AL549_RS07150 9e76ffab64b179d876542b36e460bb0b 507 SUPERFAMILY SSF47413 12 84 7.04E-12 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS07150 9e76ffab64b179d876542b36e460bb0b 507 SMART SM00530 17 79 1.2E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL549_RS07150 9e76ffab64b179d876542b36e460bb0b 507 Pfam PF01381 Helix-turn-helix 18 79 2.6E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL549_RS07150 9e76ffab64b179d876542b36e460bb0b 507 Pfam PF12268 Protein of unknown function (DUF3612) 327 501 6.3E-103 T 28-03-2018 IPR022055 Protein of unknown function DUF3612 AL549_RS07150 9e76ffab64b179d876542b36e460bb0b 507 Gene3D G3DSA:3.30.1190.10 60 107 0.0048 T 28-03-2018 AL549_RS07150 9e76ffab64b179d876542b36e460bb0b 507 Pfam PF06114 IrrE N-terminal-like domain 206 326 2.5E-5 T 28-03-2018 IPR010359 IrrE N-terminal-like domain AL549_RS07150 9e76ffab64b179d876542b36e460bb0b 507 Gene3D G3DSA:1.10.260.40 14 59 2.0E-11 T 28-03-2018 AL549_RS01810 d136b0f985a062b58c665a80b8dcc0bb 667 Gene3D G3DSA:3.40.630.40 33 279 1.2E-34 T 28-03-2018 AL549_RS01810 d136b0f985a062b58c665a80b8dcc0bb 667 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 303 649 2.2E-119 T 28-03-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA AL549_RS01810 d136b0f985a062b58c665a80b8dcc0bb 667 SUPERFAMILY SSF53187 36 230 1.38E-14 T 28-03-2018 AL549_RS01810 d136b0f985a062b58c665a80b8dcc0bb 667 Pfam PF05013 N-formylglutamate amidohydrolase 42 229 2.7E-19 T 28-03-2018 IPR007709 N-formylglutamate amidohydrolase AL549_RS01810 d136b0f985a062b58c665a80b8dcc0bb 667 Pfam PF08014 Domain of unknown function (DUF1704) 329 663 6.8E-109 T 28-03-2018 IPR012548 Protein of unknown function DUF1704 AL549_RS01810 d136b0f985a062b58c665a80b8dcc0bb 667 SMART SM01154 328 666 1.3E-153 T 28-03-2018 IPR012548 Protein of unknown function DUF1704 AL549_RS10990 80507f7781fd132d6616fd9d6015672c 449 SUPERFAMILY SSF48019 253 435 3.06E-73 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL549_RS10990 80507f7781fd132d6616fd9d6015672c 449 SUPERFAMILY SSF52540 11 236 2.84E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS10990 80507f7781fd132d6616fd9d6015672c 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 1.4E-67 T 28-03-2018 IPR021886 MgsA AAA+ ATPase C-terminal AL549_RS10990 80507f7781fd132d6616fd9d6015672c 449 Pfam PF16193 AAA C-terminal domain 190 268 1.6E-21 T 28-03-2018 IPR032423 AAA C-terminal domain AL549_RS10990 80507f7781fd132d6616fd9d6015672c 449 Gene3D G3DSA:1.10.8.60 155 244 4.6E-19 T 28-03-2018 AL549_RS10990 80507f7781fd132d6616fd9d6015672c 449 Gene3D G3DSA:1.10.3710.10 349 449 1.1E-33 T 28-03-2018 AL549_RS10990 80507f7781fd132d6616fd9d6015672c 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 7.9E-17 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL549_RS10990 80507f7781fd132d6616fd9d6015672c 449 SMART SM00382 50 166 1.6E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS10990 80507f7781fd132d6616fd9d6015672c 449 Gene3D G3DSA:1.20.272.10 253 347 1.7E-37 T 28-03-2018 AL549_RS10990 80507f7781fd132d6616fd9d6015672c 449 Gene3D G3DSA:3.40.50.300 8 154 1.9E-30 T 28-03-2018 AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 Gene3D G3DSA:3.30.300.20 278 348 1.2E-12 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 SUPERFAMILY SSF69705 1 126 2.35E-39 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 Gene3D G3DSA:3.30.300.20 199 276 4.2E-32 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 Pfam PF08529 NusA N-terminal domain 4 123 7.8E-35 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 SMART SM00316 133 198 4.1E-6 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 28.603 T 28-03-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 9.0E-18 T 28-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 4.0E-21 T 28-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 SUPERFAMILY SSF54814 279 343 3.66E-15 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 Gene3D G3DSA:3.30.1480.10 1 129 4.2E-43 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 SUPERFAMILY SSF47794 356 415 8.16E-17 T 28-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 Pfam PF13184 NusA-like KH domain 230 297 4.9E-27 T 28-03-2018 IPR025249 KH domain, NusA-like GO:0003723 AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 Gene3D G3DSA:2.40.50.140 135 198 5.2E-12 T 28-03-2018 AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 SUPERFAMILY SSF54814 201 278 1.24E-28 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 SUPERFAMILY SSF47794 429 492 3.61E-16 T 28-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.9E-123 T 28-03-2018 IPR010213 Transcription termination factor NusA GO:0003723 AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 SUPERFAMILY SSF50249 132 199 1.2E-16 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 1.8E-8 T 28-03-2018 AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 Gene3D G3DSA:1.10.150.20 428 495 6.7E-15 T 28-03-2018 AL549_RS18575 786097aeef39b7a646656b9259673bfe 495 Gene3D G3DSA:1.10.150.20 352 421 8.1E-16 T 28-03-2018 AL549_RS03805 6afc67a06237c8028029550c50ef8e46 299 Gene3D G3DSA:3.40.190.10 174 260 5.8E-26 T 28-03-2018 AL549_RS03805 6afc67a06237c8028029550c50ef8e46 299 SUPERFAMILY SSF46785 1 87 2.95E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03805 6afc67a06237c8028029550c50ef8e46 299 Pfam PF03466 LysR substrate binding domain 88 291 7.8E-42 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS03805 6afc67a06237c8028029550c50ef8e46 299 SUPERFAMILY SSF53850 88 292 1.81E-43 T 28-03-2018 AL549_RS03805 6afc67a06237c8028029550c50ef8e46 299 Gene3D G3DSA:1.10.10.10 1 83 3.4E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03805 6afc67a06237c8028029550c50ef8e46 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 5.7E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03805 6afc67a06237c8028029550c50ef8e46 299 Gene3D G3DSA:3.40.190.10 87 173 1.0E-13 T 28-03-2018 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 Gene3D G3DSA:3.30.70.1440 675 769 2.5E-20 T 28-03-2018 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 Gene3D G3DSA:1.20.1640.10 848 1043 1.5E-36 T 28-03-2018 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.1E-88 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.1E-88 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 1.1E-88 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.1E-88 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.1E-88 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 1.1E-88 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.1E-88 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 1.1E-88 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 1.1E-88 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 SUPERFAMILY SSF82693 136 183 1.92E-21 T 28-03-2018 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 SUPERFAMILY SSF82693 276 332 1.92E-21 T 28-03-2018 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 Gene3D G3DSA:3.30.70.1430 39 141 2.0E-26 T 28-03-2018 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 SUPERFAMILY SSF82693 39 132 8.89E-26 T 28-03-2018 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 Gene3D G3DSA:1.20.1640.10 275 502 3.4E-46 T 28-03-2018 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1034 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 SUPERFAMILY SSF82693 565 674 1.78E-21 T 28-03-2018 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 Gene3D G3DSA:3.30.70.1320 770 847 4.1E-8 T 28-03-2018 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 Gene3D G3DSA:3.30.2090.10 182 274 5.2E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 SUPERFAMILY SSF82866 299 500 1.7E-47 T 28-03-2018 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 SUPERFAMILY SSF82714 725 809 3.79E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 SUPERFAMILY SSF82714 184 273 5.36E-23 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1030 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 SUPERFAMILY SSF82866 808 1035 2.49E-43 T 28-03-2018 AL549_RS04655 6712ef984fc40e2c95ef1a93114df380 1050 Gene3D G3DSA:3.30.70.1430 567 674 1.0E-16 T 28-03-2018 AL549_RS03910 034348b103ee29c43c55414c6dcc0d40 313 Pfam PF03466 LysR substrate binding domain 91 293 2.3E-21 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS03910 034348b103ee29c43c55414c6dcc0d40 313 SUPERFAMILY SSF53850 88 293 6.52E-39 T 28-03-2018 AL549_RS03910 034348b103ee29c43c55414c6dcc0d40 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03910 034348b103ee29c43c55414c6dcc0d40 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03910 034348b103ee29c43c55414c6dcc0d40 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03910 034348b103ee29c43c55414c6dcc0d40 313 Gene3D G3DSA:1.10.10.10 1 85 8.4E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03910 034348b103ee29c43c55414c6dcc0d40 313 Gene3D G3DSA:3.40.190.10 181 267 8.0E-16 T 28-03-2018 AL549_RS03910 034348b103ee29c43c55414c6dcc0d40 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 6.2E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03910 034348b103ee29c43c55414c6dcc0d40 313 SUPERFAMILY SSF46785 2 84 7.81E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03910 034348b103ee29c43c55414c6dcc0d40 313 Gene3D G3DSA:3.40.190.10 92 180 3.4E-12 T 28-03-2018 AL549_RS11400 fc05a642b7eca4a8aa7930878f263e4f 381 Pfam PF13416 Bacterial extracellular solute-binding protein 59 331 1.0E-23 T 28-03-2018 AL549_RS11400 fc05a642b7eca4a8aa7930878f263e4f 381 Gene3D G3DSA:3.40.190.10 152 330 6.0E-21 T 28-03-2018 AL549_RS11400 fc05a642b7eca4a8aa7930878f263e4f 381 SUPERFAMILY SSF53850 33 379 1.52E-39 T 28-03-2018 AL549_RS11400 fc05a642b7eca4a8aa7930878f263e4f 381 PIRSF PIRSF029172 1 381 8.2E-171 T 28-03-2018 IPR027020 Protein ynjB AL549_RS02750 3913a8a6eef07dd1793efeb952e58844 399 Gene3D G3DSA:1.20.1250.20 1 187 4.4E-29 T 28-03-2018 AL549_RS02750 3913a8a6eef07dd1793efeb952e58844 399 Gene3D G3DSA:1.20.1250.20 188 381 1.0E-14 T 28-03-2018 AL549_RS02750 3913a8a6eef07dd1793efeb952e58844 399 SUPERFAMILY SSF103473 3 381 4.71E-49 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS02750 3913a8a6eef07dd1793efeb952e58844 399 Pfam PF07690 Major Facilitator Superfamily 4 259 3.7E-35 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS19700 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Gene3D G3DSA:3.40.50.1370 147 292 9.9E-51 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL549_RS19700 035c0f4abb63dfff2c2ec8e6dfc3715d 309 SUPERFAMILY SSF53671 4 306 1.57E-101 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL549_RS19700 035c0f4abb63dfff2c2ec8e6dfc3715d 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 2.5E-115 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL549_RS19700 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 2.6E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL549_RS19700 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 2.6E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL549_RS19700 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 2.6E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL549_RS19700 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.6E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL549_RS19700 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.569 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL549_RS19700 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 5.4E-37 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL549_RS19700 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 5.4E-37 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL549_RS19700 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 5.4E-37 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL549_RS19700 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 5.4E-37 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL549_RS19700 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 5.4E-37 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL549_RS19700 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 5.4E-37 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL549_RS19700 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 7.5E-45 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AL549_RS19700 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Gene3D G3DSA:3.40.50.1370 1 146 2.4E-50 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL549_RS19700 035c0f4abb63dfff2c2ec8e6dfc3715d 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL549_RS19700 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 1.5E-32 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AL549_RS13905 73fb5b28debc3428798be91e19db6ca6 65 Pfam PF11665 Protein of unknown function (DUF3265) 18 45 2.3E-12 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS20435 f05540c9f9d12389dddf45ab17a41a1d 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 4.4E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS20435 f05540c9f9d12389dddf45ab17a41a1d 228 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 88 193 9.3E-15 T 28-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AL549_RS20435 f05540c9f9d12389dddf45ab17a41a1d 228 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 223 2.0E-59 T 28-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AL549_RS20435 f05540c9f9d12389dddf45ab17a41a1d 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 83 194 5.8E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS20435 f05540c9f9d12389dddf45ab17a41a1d 228 Gene3D G3DSA:3.40.50.1000 3 32 0.0079 T 28-03-2018 IPR023214 HAD-like domain AL549_RS20435 f05540c9f9d12389dddf45ab17a41a1d 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 193 1.1E-36 T 28-03-2018 IPR023214 HAD-like domain AL549_RS20435 f05540c9f9d12389dddf45ab17a41a1d 228 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 225 35.104 T 28-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AL549_RS20435 f05540c9f9d12389dddf45ab17a41a1d 228 Gene3D G3DSA:3.40.50.1000 84 227 1.0E-37 T 28-03-2018 IPR023214 HAD-like domain AL549_RS20435 f05540c9f9d12389dddf45ab17a41a1d 228 SUPERFAMILY SSF56784 5 224 1.71E-60 T 28-03-2018 IPR023214 HAD-like domain AL549_RS20435 f05540c9f9d12389dddf45ab17a41a1d 228 Gene3D G3DSA:1.10.150.240 33 83 6.0E-16 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AL549_RS10075 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 SUPERFAMILY SSF51735 3 166 1.63E-66 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS10075 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 SUPERFAMILY SSF55347 149 312 1.81E-77 T 28-03-2018 AL549_RS10075 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 1.2E-136 T 28-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS10075 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 3.1E-46 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS10075 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 3.1E-46 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS10075 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 3.1E-46 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS10075 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 3.1E-46 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS10075 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 3.1E-46 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS10075 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 Gene3D G3DSA:3.30.360.10 160 314 3.8E-78 T 28-03-2018 AL549_RS10075 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PIRSF PIRSF000149 1 331 3.8E-134 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS10075 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 Gene3D G3DSA:3.40.50.720 1 159 3.7E-79 T 28-03-2018 AL549_RS10075 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 SMART SM00846 3 150 8.6E-95 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS10075 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 5.5E-40 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS10075 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 9.2E-70 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS10075 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 28-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS15980 77dcbc5f00c9daa7ea2daa792a3519a1 195 Gene3D G3DSA:1.10.3210.10 1 195 7.2E-46 T 28-03-2018 AL549_RS15980 77dcbc5f00c9daa7ea2daa792a3519a1 195 Pfam PF13023 HD domain 15 169 3.0E-52 T 28-03-2018 IPR006674 HD domain AL549_RS15980 77dcbc5f00c9daa7ea2daa792a3519a1 195 SUPERFAMILY SSF109604 4 184 7.42E-44 T 28-03-2018 AL549_RS15465 07c8427bf01bfebbc5053d416acf53eb 437 Gene3D G3DSA:3.20.140.10 8 414 1.4E-89 T 28-03-2018 AL549_RS15465 07c8427bf01bfebbc5053d416acf53eb 437 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 411 2.8E-155 T 28-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL549_RS15465 07c8427bf01bfebbc5053d416acf53eb 437 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 413 43.297 T 28-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL549_RS15465 07c8427bf01bfebbc5053d416acf53eb 437 SUPERFAMILY SSF54675 8 147 8.83E-35 T 28-03-2018 AL549_RS15465 07c8427bf01bfebbc5053d416acf53eb 437 SUPERFAMILY SSF51690 129 410 6.67E-86 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL549_RS15465 07c8427bf01bfebbc5053d416acf53eb 437 PIRSF PIRSF000484 1 403 3.0E-72 T 28-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AL549_RS15465 07c8427bf01bfebbc5053d416acf53eb 437 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 178 411 1.7E-76 T 28-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AL549_RS08455 84f7adba317a3b1539cbae71643c5975 294 Gene3D G3DSA:2.60.200.30 143 266 1.5E-38 T 28-03-2018 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AL549_RS08455 84f7adba317a3b1539cbae71643c5975 294 Gene3D G3DSA:3.40.50.10330 1 142 5.2E-35 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 AL549_RS08455 84f7adba317a3b1539cbae71643c5975 294 Pfam PF01513 ATP-NAD kinase 8 273 1.1E-68 T 28-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AL549_RS08455 84f7adba317a3b1539cbae71643c5975 294 SUPERFAMILY SSF111331 8 290 1.22E-91 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain AL549_RS08455 84f7adba317a3b1539cbae71643c5975 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.784 T 28-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AL549_RS20460 a20c1e5a3c12a37f75a885dedf6f9b1f 394 Gene3D G3DSA:3.40.50.80 256 394 4.9E-25 T 28-03-2018 AL549_RS20460 a20c1e5a3c12a37f75a885dedf6f9b1f 394 SUPERFAMILY SSF52343 256 393 3.01E-37 T 28-03-2018 AL549_RS20460 a20c1e5a3c12a37f75a885dedf6f9b1f 394 SUPERFAMILY SSF63380 149 254 4.4E-29 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL549_RS20460 a20c1e5a3c12a37f75a885dedf6f9b1f 394 SUPERFAMILY SSF46458 1 142 1.4E-37 T 28-03-2018 IPR009050 Globin-like AL549_RS20460 a20c1e5a3c12a37f75a885dedf6f9b1f 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 1.4E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL549_RS20460 a20c1e5a3c12a37f75a885dedf6f9b1f 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 1.4E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL549_RS20460 a20c1e5a3c12a37f75a885dedf6f9b1f 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 1.4E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL549_RS20460 a20c1e5a3c12a37f75a885dedf6f9b1f 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 356 364 1.4E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL549_RS20460 a20c1e5a3c12a37f75a885dedf6f9b1f 394 Pfam PF00970 Oxidoreductase FAD-binding domain 155 252 4.2E-11 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AL549_RS20460 a20c1e5a3c12a37f75a885dedf6f9b1f 394 Pfam PF00042 Globin 8 102 2.4E-14 T 28-03-2018 IPR000971 Globin GO:0020037 AL549_RS20460 a20c1e5a3c12a37f75a885dedf6f9b1f 394 Gene3D G3DSA:2.40.30.10 158 254 1.4E-27 T 28-03-2018 AL549_RS20460 a20c1e5a3c12a37f75a885dedf6f9b1f 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 394 57.036 T 28-03-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 AL549_RS20460 a20c1e5a3c12a37f75a885dedf6f9b1f 394 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 4.9E-17 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL549_RS20460 a20c1e5a3c12a37f75a885dedf6f9b1f 394 Gene3D G3DSA:1.10.490.10 1 157 5.2E-40 T 28-03-2018 AL549_RS20460 a20c1e5a3c12a37f75a885dedf6f9b1f 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 4.2E-10 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL549_RS20460 a20c1e5a3c12a37f75a885dedf6f9b1f 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 4.2E-10 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL549_RS20460 a20c1e5a3c12a37f75a885dedf6f9b1f 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 4.2E-10 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL549_RS20460 a20c1e5a3c12a37f75a885dedf6f9b1f 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 4.2E-10 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL549_RS11020 6a4f8ea6f9eeebca620d33d1a0fb96f5 234 SUPERFAMILY SSF52540 9 220 7.08E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11020 6a4f8ea6f9eeebca620d33d1a0fb96f5 234 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 9 219 30.083 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AL549_RS11020 6a4f8ea6f9eeebca620d33d1a0fb96f5 234 Pfam PF13500 AAA domain 11 218 5.7E-40 T 28-03-2018 AL549_RS11020 6a4f8ea6f9eeebca620d33d1a0fb96f5 234 Gene3D G3DSA:3.40.50.300 7 226 2.8E-62 T 28-03-2018 AL549_RS11020 6a4f8ea6f9eeebca620d33d1a0fb96f5 234 PIRSF PIRSF006755 8 234 3.0E-79 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AL549_RS11020 6a4f8ea6f9eeebca620d33d1a0fb96f5 234 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 13 183 6.5E-54 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AL549_RS07775 30fda3a01820b62137c4be615b29048e 437 Pfam PF05525 Branched-chain amino acid transport protein 8 426 6.7E-153 T 28-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AL549_RS07775 30fda3a01820b62137c4be615b29048e 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 1.1E-137 T 28-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AL549_RS19135 3fb335023432720a3fe5fe1093272e53 433 Gene3D G3DSA:3.20.20.120 128 432 7.9E-100 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL549_RS19135 3fb335023432720a3fe5fe1093272e53 433 PIRSF PIRSF001400 1 430 1.9E-190 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS19135 3fb335023432720a3fe5fe1093272e53 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 1.5E-135 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS19135 3fb335023432720a3fe5fe1093272e53 433 Pfam PF03952 Enolase, N-terminal domain 4 134 3.2E-58 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS19135 3fb335023432720a3fe5fe1093272e53 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 28-03-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19135 3fb335023432720a3fe5fe1093272e53 433 SUPERFAMILY SSF51604 143 428 2.69E-125 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL549_RS19135 3fb335023432720a3fe5fe1093272e53 433 SMART SM01193 4 134 1.7E-92 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS19135 3fb335023432720a3fe5fe1093272e53 433 SUPERFAMILY SSF54826 3 138 4.12E-56 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS19135 3fb335023432720a3fe5fe1093272e53 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 2.2E-206 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS19135 3fb335023432720a3fe5fe1093272e53 433 SMART SM01192 143 431 6.3E-212 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS19135 3fb335023432720a3fe5fe1093272e53 433 Gene3D G3DSA:3.30.390.10 3 127 1.8E-50 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS19135 3fb335023432720a3fe5fe1093272e53 433 Hamap MF_00318 Enolase [eno]. 2 417 44.279 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS19135 3fb335023432720a3fe5fe1093272e53 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS19135 3fb335023432720a3fe5fe1093272e53 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS19135 3fb335023432720a3fe5fe1093272e53 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS19135 3fb335023432720a3fe5fe1093272e53 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS19135 3fb335023432720a3fe5fe1093272e53 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS19135 3fb335023432720a3fe5fe1093272e53 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS06310 d13649ea2c11ee251fb4224d7ee9c6e4 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 8.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS06310 d13649ea2c11ee251fb4224d7ee9c6e4 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 8.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS06310 d13649ea2c11ee251fb4224d7ee9c6e4 275 Gene3D G3DSA:2.60.120.10 16 224 3.4E-13 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS06310 d13649ea2c11ee251fb4224d7ee9c6e4 275 Pfam PF12833 Helix-turn-helix domain 190 267 1.0E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS06310 d13649ea2c11ee251fb4224d7ee9c6e4 275 SUPERFAMILY SSF46689 220 270 1.25E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS06310 d13649ea2c11ee251fb4224d7ee9c6e4 275 SMART SM00342 184 266 1.7E-26 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS06310 d13649ea2c11ee251fb4224d7ee9c6e4 275 Gene3D G3DSA:1.10.10.60 225 275 1.3E-12 T 28-03-2018 AL549_RS06310 d13649ea2c11ee251fb4224d7ee9c6e4 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 217 262 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL549_RS02345 1105f333b3fa3e4b2051aac79c723250 215 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 203 7.4E-30 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL549_RS02345 1105f333b3fa3e4b2051aac79c723250 215 SUPERFAMILY SSF51366 1 214 6.28E-37 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL549_RS02345 1105f333b3fa3e4b2051aac79c723250 215 Gene3D G3DSA:3.20.20.70 1 215 7.7E-30 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS02345 1105f333b3fa3e4b2051aac79c723250 215 SMART SM00934 5 206 3.4E-26 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL549_RS20155 2844afc9595ae4a5c2bb25c826b6b752 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL549_RS20155 2844afc9595ae4a5c2bb25c826b6b752 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 64.065 T 28-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AL549_RS20155 2844afc9595ae4a5c2bb25c826b6b752 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL549_RS20155 2844afc9595ae4a5c2bb25c826b6b752 378 SUPERFAMILY SSF53187 3 176 5.14E-55 T 28-03-2018 AL549_RS20155 2844afc9595ae4a5c2bb25c826b6b752 378 SUPERFAMILY SSF53187 301 377 5.14E-55 T 28-03-2018 AL549_RS20155 2844afc9595ae4a5c2bb25c826b6b752 378 Gene3D G3DSA:3.40.630.10 5 283 1.9E-49 T 28-03-2018 AL549_RS20155 2844afc9595ae4a5c2bb25c826b6b752 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 1.6E-127 T 28-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AL549_RS20155 2844afc9595ae4a5c2bb25c826b6b752 378 Pfam PF07687 Peptidase dimerisation domain 174 285 2.0E-24 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL549_RS20155 2844afc9595ae4a5c2bb25c826b6b752 378 Pfam PF01546 Peptidase family M20/M25/M40 72 374 1.4E-31 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL549_RS20155 2844afc9595ae4a5c2bb25c826b6b752 378 SUPERFAMILY SSF55031 177 291 1.64E-22 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL549_RS06780 b9ceb397e67489928be7b2ae231d8ae8 635 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 600 3.5E-41 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS06780 b9ceb397e67489928be7b2ae231d8ae8 635 Gene3D G3DSA:3.30.450.20 162 279 9.4E-16 T 28-03-2018 AL549_RS06780 b9ceb397e67489928be7b2ae231d8ae8 635 SUPERFAMILY SSF58104 325 634 3.66E-72 T 28-03-2018 AL549_RS06780 b9ceb397e67489928be7b2ae231d8ae8 635 SMART SM00304 303 357 2.3E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS06780 b9ceb397e67489928be7b2ae231d8ae8 635 Gene3D G3DSA:3.30.450.20 28 161 7.7E-16 T 28-03-2018 AL549_RS06780 b9ceb397e67489928be7b2ae231d8ae8 635 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 9.2E-6 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS06780 b9ceb397e67489928be7b2ae231d8ae8 635 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 499 528 9.2E-6 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS06780 b9ceb397e67489928be7b2ae231d8ae8 635 Gene3D G3DSA:1.10.287.950 280 384 0.019 T 28-03-2018 AL549_RS06780 b9ceb397e67489928be7b2ae231d8ae8 635 Gene3D G3DSA:1.10.287.950 386 596 6.4E-51 T 28-03-2018 AL549_RS06780 b9ceb397e67489928be7b2ae231d8ae8 635 SUPERFAMILY SSF103190 119 185 1.62E-10 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL549_RS06780 b9ceb397e67489928be7b2ae231d8ae8 635 SMART SM00283 372 633 2.0E-65 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS06780 b9ceb397e67489928be7b2ae231d8ae8 635 Pfam PF02743 Cache domain 35 265 2.3E-21 T 28-03-2018 IPR033479 Double Cache domain 1 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 Gene3D G3DSA:3.40.50.2300 975 1096 1.9E-24 T 28-03-2018 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 Gene3D G3DSA:3.40.50.2300 1097 1241 1.6E-24 T 28-03-2018 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 SUPERFAMILY SSF47384 655 737 6.08E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 SUPERFAMILY SSF52172 1106 1222 1.57E-21 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 SMART SM00387 783 906 6.5E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 783 904 1.8E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 SMART SM00388 668 736 1.9E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 Gene3D G3DSA:3.30.565.10 740 915 1.4E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 Gene3D G3DSA:3.40.50.2300 1242 1370 9.0E-39 T 28-03-2018 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 SUPERFAMILY SSF55781 380 541 1.1E-17 T 28-03-2018 IPR029016 GAF domain-like AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 SMART SM00448 1251 1365 6.0E-39 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 SMART SM00448 1105 1219 4.2E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 SMART SM00448 983 1093 6.0E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 Pfam PF02743 Cache domain 41 302 3.5E-14 T 28-03-2018 IPR033479 Double Cache domain 1 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 Gene3D G3DSA:3.30.450.20 187 319 3.7E-13 T 28-03-2018 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 SUPERFAMILY SSF52172 981 1096 8.4E-26 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 Pfam PF13185 GAF domain 409 540 1.1E-12 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 Gene3D G3DSA:1.10.287.130 658 732 6.4E-16 T 28-03-2018 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 849 859 3.9E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 831 845 3.9E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 890 903 3.9E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 866 884 3.9E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 Gene3D G3DSA:3.30.450.40 381 589 5.5E-14 T 28-03-2018 IPR029016 GAF domain-like AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 Pfam PF00512 His Kinase A (phospho-acceptor) domain 669 736 1.9E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 Pfam PF00672 HAMP domain 353 389 6.7E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 SUPERFAMILY SSF158472 341 389 3.92E-9 T 28-03-2018 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 SMART SM00304 340 392 6.9E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 SUPERFAMILY SSF52172 1249 1369 4.41E-38 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 SUPERFAMILY SSF55874 725 904 5.76E-42 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 Pfam PF00072 Response regulator receiver domain 986 1092 6.7E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 Pfam PF00072 Response regulator receiver domain 1108 1215 8.1E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 Pfam PF00072 Response regulator receiver domain 1253 1365 3.9E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS05380 7394bf2a2038e8daf869d6557de1accf 1370 Gene3D G3DSA:3.30.450.20 71 186 4.1E-7 T 28-03-2018 AL549_RS06870 7191aef39c6879303d64068d5b1934b9 200 SUPERFAMILY SSF50249 2 63 2.25E-7 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS06870 7191aef39c6879303d64068d5b1934b9 200 Gene3D G3DSA:2.40.50.140 1 66 1.0E-9 T 28-03-2018 AL549_RS06870 7191aef39c6879303d64068d5b1934b9 200 Pfam PF06961 Protein of unknown function (DUF1294) 103 157 1.2E-15 T 28-03-2018 IPR010718 Protein of unknown function DUF1294 AL549_RS10245 568a6abad0681678c68ccef730e32c3d 217 SMART SM00479 18 204 3.0E-30 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL549_RS10245 568a6abad0681678c68ccef730e32c3d 217 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 8.1E-100 T 28-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AL549_RS10245 568a6abad0681678c68ccef730e32c3d 217 Hamap MF_00157 Ribonuclease T [rnt]. 1 217 115.696 T 28-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AL549_RS10245 568a6abad0681678c68ccef730e32c3d 217 Pfam PF00929 Exonuclease 20 195 4.4E-45 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL549_RS10245 568a6abad0681678c68ccef730e32c3d 217 Gene3D G3DSA:3.30.420.10 10 206 3.2E-31 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS10245 568a6abad0681678c68ccef730e32c3d 217 SUPERFAMILY SSF53098 10 208 1.17E-56 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS09600 fb8d43f28f1b088138aa5237a66a5e6b 390 SUPERFAMILY SSF47819 213 320 1.41E-23 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AL549_RS09600 fb8d43f28f1b088138aa5237a66a5e6b 390 Pfam PF00570 HRDC domain 232 298 1.6E-10 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AL549_RS09600 fb8d43f28f1b088138aa5237a66a5e6b 390 SUPERFAMILY SSF53098 17 228 8.86E-71 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS09600 fb8d43f28f1b088138aa5237a66a5e6b 390 Gene3D G3DSA:3.30.420.10 20 212 2.5E-47 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS09600 fb8d43f28f1b088138aa5237a66a5e6b 390 SMART SM00474 22 190 6.3E-46 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AL549_RS09600 fb8d43f28f1b088138aa5237a66a5e6b 390 Hamap MF_01899 Ribonuclease D [rnd]. 22 389 42.593 T 28-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AL549_RS09600 fb8d43f28f1b088138aa5237a66a5e6b 390 Pfam PF01612 3'-5' exonuclease 22 189 1.3E-41 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AL549_RS09600 fb8d43f28f1b088138aa5237a66a5e6b 390 TIGRFAM TIGR01388 rnd: ribonuclease D 24 389 4.7E-142 T 28-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AL549_RS09600 fb8d43f28f1b088138aa5237a66a5e6b 390 SUPERFAMILY SSF47819 315 390 1.11E-19 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AL549_RS09600 fb8d43f28f1b088138aa5237a66a5e6b 390 Gene3D G3DSA:1.10.150.80 213 312 8.5E-15 T 28-03-2018 AL549_RS01785 fa40b442bc815cafe19cbe983f8a80c3 481 SUPERFAMILY SSF46689 112 159 1.12E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS01785 fa40b442bc815cafe19cbe983f8a80c3 481 SUPERFAMILY SSF57884 27 111 8.24E-34 T 28-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AL549_RS01785 fa40b442bc815cafe19cbe983f8a80c3 481 Pfam PF02805 Metal binding domain of Ada 34 97 4.6E-29 T 28-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AL549_RS01785 fa40b442bc815cafe19cbe983f8a80c3 481 Pfam PF12833 Helix-turn-helix domain 132 210 1.2E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS01785 fa40b442bc815cafe19cbe983f8a80c3 481 SUPERFAMILY SSF48150 331 479 5.41E-28 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL549_RS01785 fa40b442bc815cafe19cbe983f8a80c3 481 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 163 205 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL549_RS01785 fa40b442bc815cafe19cbe983f8a80c3 481 Pfam PF06029 AlkA N-terminal domain 222 339 5.8E-33 T 28-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AL549_RS01785 fa40b442bc815cafe19cbe983f8a80c3 481 SMART SM01009 221 339 8.8E-28 T 28-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AL549_RS01785 fa40b442bc815cafe19cbe983f8a80c3 481 Gene3D G3DSA:3.40.10.10 23 99 1.0E-26 T 28-03-2018 IPR035451 Ada-like domain AL549_RS01785 fa40b442bc815cafe19cbe983f8a80c3 481 SUPERFAMILY SSF46689 164 211 3.45E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS01785 fa40b442bc815cafe19cbe983f8a80c3 481 Gene3D G3DSA:1.10.10.60 109 163 2.9E-10 T 28-03-2018 AL549_RS01785 fa40b442bc815cafe19cbe983f8a80c3 481 SUPERFAMILY SSF55945 222 321 5.02E-25 T 28-03-2018 AL549_RS01785 fa40b442bc815cafe19cbe983f8a80c3 481 Gene3D G3DSA:1.10.10.60 164 222 1.1E-9 T 28-03-2018 AL549_RS01785 fa40b442bc815cafe19cbe983f8a80c3 481 Gene3D G3DSA:3.30.310.20 223 338 6.1E-24 T 28-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AL549_RS01785 fa40b442bc815cafe19cbe983f8a80c3 481 Gene3D G3DSA:1.10.340.30 339 441 9.6E-16 T 28-03-2018 AL549_RS01785 fa40b442bc815cafe19cbe983f8a80c3 481 Gene3D G3DSA:1.10.1670.10 443 481 0.0037 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AL549_RS01785 fa40b442bc815cafe19cbe983f8a80c3 481 SMART SM00342 126 209 2.0E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS01020 9f18fab57b1d7745e71f0611472f632c 136 SUPERFAMILY SSF54427 25 135 1.44E-15 T 28-03-2018 IPR032710 NTF2-like domain AL549_RS01020 9f18fab57b1d7745e71f0611472f632c 136 Pfam PF14534 Domain of unknown function (DUF4440) 29 126 7.9E-7 T 28-03-2018 IPR027843 Domain of unknown function DUF4440 AL549_RS01020 9f18fab57b1d7745e71f0611472f632c 136 Gene3D G3DSA:3.10.450.50 23 129 9.8E-12 T 28-03-2018 AL549_RS12550 3f54cd2f0b8cb77ecbea49a9f544b1da 441 Gene3D G3DSA:3.90.350.10 111 333 1.4E-18 T 28-03-2018 IPR014736 Transposase, Tn5-like, core AL549_RS12550 3f54cd2f0b8cb77ecbea49a9f544b1da 441 SUPERFAMILY SSF53098 100 357 2.2E-28 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS12550 3f54cd2f0b8cb77ecbea49a9f544b1da 441 Pfam PF13006 Insertion element 4 transposase N-terminal 18 109 2.8E-29 T 28-03-2018 IPR024473 Transposase, IS4, N-terminal AL549_RS12550 3f54cd2f0b8cb77ecbea49a9f544b1da 441 Pfam PF01609 Transposase DDE domain 128 352 3.2E-24 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL549_RS01920 3f54cd2f0b8cb77ecbea49a9f544b1da 441 Gene3D G3DSA:3.90.350.10 111 333 1.4E-18 T 28-03-2018 IPR014736 Transposase, Tn5-like, core AL549_RS01920 3f54cd2f0b8cb77ecbea49a9f544b1da 441 SUPERFAMILY SSF53098 100 357 2.2E-28 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS01920 3f54cd2f0b8cb77ecbea49a9f544b1da 441 Pfam PF13006 Insertion element 4 transposase N-terminal 18 109 2.8E-29 T 28-03-2018 IPR024473 Transposase, IS4, N-terminal AL549_RS01920 3f54cd2f0b8cb77ecbea49a9f544b1da 441 Pfam PF01609 Transposase DDE domain 128 352 3.2E-24 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL549_RS16170 3f54cd2f0b8cb77ecbea49a9f544b1da 441 Gene3D G3DSA:3.90.350.10 111 333 1.4E-18 T 28-03-2018 IPR014736 Transposase, Tn5-like, core AL549_RS16170 3f54cd2f0b8cb77ecbea49a9f544b1da 441 SUPERFAMILY SSF53098 100 357 2.2E-28 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS16170 3f54cd2f0b8cb77ecbea49a9f544b1da 441 Pfam PF13006 Insertion element 4 transposase N-terminal 18 109 2.8E-29 T 28-03-2018 IPR024473 Transposase, IS4, N-terminal AL549_RS16170 3f54cd2f0b8cb77ecbea49a9f544b1da 441 Pfam PF01609 Transposase DDE domain 128 352 3.2E-24 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL549_RS09120 3f54cd2f0b8cb77ecbea49a9f544b1da 441 Gene3D G3DSA:3.90.350.10 111 333 1.4E-18 T 28-03-2018 IPR014736 Transposase, Tn5-like, core AL549_RS09120 3f54cd2f0b8cb77ecbea49a9f544b1da 441 SUPERFAMILY SSF53098 100 357 2.2E-28 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS09120 3f54cd2f0b8cb77ecbea49a9f544b1da 441 Pfam PF13006 Insertion element 4 transposase N-terminal 18 109 2.8E-29 T 28-03-2018 IPR024473 Transposase, IS4, N-terminal AL549_RS09120 3f54cd2f0b8cb77ecbea49a9f544b1da 441 Pfam PF01609 Transposase DDE domain 128 352 3.2E-24 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL549_RS17585 3f54cd2f0b8cb77ecbea49a9f544b1da 441 Gene3D G3DSA:3.90.350.10 111 333 1.4E-18 T 28-03-2018 IPR014736 Transposase, Tn5-like, core AL549_RS17585 3f54cd2f0b8cb77ecbea49a9f544b1da 441 SUPERFAMILY SSF53098 100 357 2.2E-28 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS17585 3f54cd2f0b8cb77ecbea49a9f544b1da 441 Pfam PF13006 Insertion element 4 transposase N-terminal 18 109 2.8E-29 T 28-03-2018 IPR024473 Transposase, IS4, N-terminal AL549_RS17585 3f54cd2f0b8cb77ecbea49a9f544b1da 441 Pfam PF01609 Transposase DDE domain 128 352 3.2E-24 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL549_RS10065 e011111d2bcacc60de97819b23cd2f08 678 SUPERFAMILY SSF58104 378 677 7.15E-65 T 28-03-2018 AL549_RS10065 e011111d2bcacc60de97819b23cd2f08 678 SUPERFAMILY SSF103190 115 211 1.22E-12 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL549_RS10065 e011111d2bcacc60de97819b23cd2f08 678 Pfam PF17201 Cache 3/Cache 2 fusion domain 40 323 3.1E-65 T 28-03-2018 IPR033462 Cache 3/Cache 2 fusion domain AL549_RS10065 e011111d2bcacc60de97819b23cd2f08 678 Gene3D G3DSA:3.30.450.20 41 322 2.3E-18 T 28-03-2018 AL549_RS10065 e011111d2bcacc60de97819b23cd2f08 678 Gene3D G3DSA:1.10.287.950 458 678 2.3E-48 T 28-03-2018 AL549_RS10065 e011111d2bcacc60de97819b23cd2f08 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 515 542 1.7E-21 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS10065 e011111d2bcacc60de97819b23cd2f08 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 544 573 1.7E-21 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS10065 e011111d2bcacc60de97819b23cd2f08 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 438 467 1.7E-21 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS10065 e011111d2bcacc60de97819b23cd2f08 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 490 644 3.5E-42 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS10065 e011111d2bcacc60de97819b23cd2f08 678 SMART SM00283 417 678 1.5E-67 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS10065 e011111d2bcacc60de97819b23cd2f08 678 Gene3D G3DSA:1.10.287.850 378 457 2.1E-6 T 28-03-2018 AL549_RS03205 381a652e08fd989364ae39353a30d0e8 170 PIRSF PIRSF011443 2 170 3.4E-73 T 28-03-2018 IPR026267 Inner membrane protein YgjV AL549_RS03205 381a652e08fd989364ae39353a30d0e8 170 Pfam PF10688 Bacterial inner membrane protein 7 163 5.0E-57 T 28-03-2018 IPR019629 Uncharacterised protein family HI1736/YgjV AL549_RS06500 40689aa3a9bd87b6bb69f0df45e78c1e 519 SMART SM00387 412 519 5.9E-10 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS06500 40689aa3a9bd87b6bb69f0df45e78c1e 519 SUPERFAMILY SSF55785 204 296 3.43E-5 T 28-03-2018 IPR000014 PAS domain AL549_RS06500 40689aa3a9bd87b6bb69f0df45e78c1e 519 SUPERFAMILY SSF55874 382 518 1.44E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS06500 40689aa3a9bd87b6bb69f0df45e78c1e 519 Gene3D G3DSA:3.30.565.10 369 519 5.4E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS06500 40689aa3a9bd87b6bb69f0df45e78c1e 519 SMART SM00091 210 279 0.0094 T 28-03-2018 IPR000014 PAS domain AL549_RS06500 40689aa3a9bd87b6bb69f0df45e78c1e 519 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 314 357 6.5E-8 T 28-03-2018 AL549_RS06500 40689aa3a9bd87b6bb69f0df45e78c1e 519 SUPERFAMILY SSF103190 36 161 1.06E-30 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL549_RS06500 40689aa3a9bd87b6bb69f0df45e78c1e 519 SUPERFAMILY SSF55890 317 386 1.44E-9 T 28-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 AL549_RS06500 40689aa3a9bd87b6bb69f0df45e78c1e 519 Gene3D G3DSA:3.30.450.20 194 319 4.8E-7 T 28-03-2018 AL549_RS06500 40689aa3a9bd87b6bb69f0df45e78c1e 519 Gene3D G3DSA:1.10.287.130 320 368 1.5E-10 T 28-03-2018 AL549_RS06500 40689aa3a9bd87b6bb69f0df45e78c1e 519 Gene3D G3DSA:3.30.450.20 27 161 8.6E-21 T 28-03-2018 AL549_RS06500 40689aa3a9bd87b6bb69f0df45e78c1e 519 Pfam PF17203 Single cache domain 3 33 157 4.0E-19 T 28-03-2018 IPR033463 Single cache domain 3 AL549_RS06500 40689aa3a9bd87b6bb69f0df45e78c1e 519 Pfam PF14501 GHKL domain 413 516 3.4E-15 T 28-03-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain AL549_RS01385 4246bc05d3c150986e9cff2ac9da97cd 615 SUPERFAMILY SSF49785 456 615 2.85E-29 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS01385 4246bc05d3c150986e9cff2ac9da97cd 615 Gene3D G3DSA:2.60.120.430 461 614 6.4E-14 T 28-03-2018 AL549_RS01385 4246bc05d3c150986e9cff2ac9da97cd 615 SUPERFAMILY SSF51445 84 404 1.04E-42 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS01385 4246bc05d3c150986e9cff2ac9da97cd 615 Gene3D G3DSA:3.20.20.80 69 409 4.8E-48 T 28-03-2018 AL549_RS02125 9de5a28f64a06bdf32ff9f38832bd0d5 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 8.4E-29 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL549_RS02125 9de5a28f64a06bdf32ff9f38832bd0d5 96 PRINTS PR00297 10kDa chaperonin signature 82 95 5.6E-24 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL549_RS02125 9de5a28f64a06bdf32ff9f38832bd0d5 96 PRINTS PR00297 10kDa chaperonin signature 25 46 5.6E-24 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL549_RS02125 9de5a28f64a06bdf32ff9f38832bd0d5 96 PRINTS PR00297 10kDa chaperonin signature 3 18 5.6E-24 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL549_RS02125 9de5a28f64a06bdf32ff9f38832bd0d5 96 PRINTS PR00297 10kDa chaperonin signature 60 72 5.6E-24 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL549_RS02125 9de5a28f64a06bdf32ff9f38832bd0d5 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 22.498 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL549_RS02125 9de5a28f64a06bdf32ff9f38832bd0d5 96 Gene3D G3DSA:2.30.33.40 1 96 7.8E-30 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL549_RS02125 9de5a28f64a06bdf32ff9f38832bd0d5 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 28-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AL549_RS02125 9de5a28f64a06bdf32ff9f38832bd0d5 96 SUPERFAMILY SSF50129 1 96 8.12E-28 T 28-03-2018 IPR011032 GroES-like AL549_RS02125 9de5a28f64a06bdf32ff9f38832bd0d5 96 SMART SM00883 2 95 2.6E-39 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL549_RS21095 9acf244688f0b2e943079fd29a95917e 263 Gene3D G3DSA:3.40.50.1860 128 250 1.9E-26 T 28-03-2018 AL549_RS21095 9acf244688f0b2e943079fd29a95917e 263 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 215 1.2E-25 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS21095 9acf244688f0b2e943079fd29a95917e 263 SUPERFAMILY SSF53681 111 260 4.91E-34 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS21095 9acf244688f0b2e943079fd29a95917e 263 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 224 1.7E-68 T 28-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS21095 9acf244688f0b2e943079fd29a95917e 263 SUPERFAMILY SSF53681 8 108 8.5E-30 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS21095 9acf244688f0b2e943079fd29a95917e 263 Gene3D G3DSA:3.40.50.1860 5 127 4.4E-28 T 28-03-2018 AL549_RS21095 9acf244688f0b2e943079fd29a95917e 263 Hamap MF_00258 Glutamate racemase [murI]. 7 254 32.808 T 28-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS21095 9acf244688f0b2e943079fd29a95917e 263 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 28-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS07385 5ac6232e3831bf1fe6ef917be26b2b6a 211 Pfam PF00293 NUDIX domain 59 201 1.5E-10 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL549_RS07385 5ac6232e3831bf1fe6ef917be26b2b6a 211 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 198 1.2E-60 T 28-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AL549_RS07385 5ac6232e3831bf1fe6ef917be26b2b6a 211 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL549_RS07385 5ac6232e3831bf1fe6ef917be26b2b6a 211 Gene3D G3DSA:3.90.79.10 1 208 6.5E-41 T 28-03-2018 AL549_RS07385 5ac6232e3831bf1fe6ef917be26b2b6a 211 SUPERFAMILY SSF55811 11 206 7.99E-45 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL549_RS10680 c6ec254b05819701c4cc623657336217 315 Gene3D G3DSA:3.30.2350.10 93 315 1.6E-68 T 28-03-2018 AL549_RS10680 c6ec254b05819701c4cc623657336217 315 SUPERFAMILY SSF55120 96 312 1.76E-65 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS10680 c6ec254b05819701c4cc623657336217 315 Pfam PF01479 S4 domain 20 66 8.8E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS10680 c6ec254b05819701c4cc623657336217 315 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS10680 c6ec254b05819701c4cc623657336217 315 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 312 2.7E-92 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS10680 c6ec254b05819701c4cc623657336217 315 SMART SM00363 20 77 2.6E-8 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS10680 c6ec254b05819701c4cc623657336217 315 Gene3D G3DSA:3.10.290.10 5 78 3.2E-14 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS10680 c6ec254b05819701c4cc623657336217 315 Pfam PF00849 RNA pseudouridylate synthase 102 247 3.2E-32 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS10680 c6ec254b05819701c4cc623657336217 315 SUPERFAMILY SSF55174 19 71 3.79E-9 T 28-03-2018 AL549_RS04160 4326af4a1bbfc931425236307944b6ea 208 SMART SM00421 143 200 1.1E-23 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS04160 4326af4a1bbfc931425236307944b6ea 208 Pfam PF00072 Response regulator receiver domain 4 115 1.1E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS04160 4326af4a1bbfc931425236307944b6ea 208 SMART SM00448 2 115 2.4E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS04160 4326af4a1bbfc931425236307944b6ea 208 Gene3D G3DSA:1.10.10.10 128 205 1.7E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS04160 4326af4a1bbfc931425236307944b6ea 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 1.8E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS04160 4326af4a1bbfc931425236307944b6ea 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 1.8E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS04160 4326af4a1bbfc931425236307944b6ea 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 1.8E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS04160 4326af4a1bbfc931425236307944b6ea 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 199 1.2E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS04160 4326af4a1bbfc931425236307944b6ea 208 Gene3D G3DSA:3.40.50.2300 1 127 1.7E-36 T 28-03-2018 AL549_RS04160 4326af4a1bbfc931425236307944b6ea 208 SUPERFAMILY SSF46894 128 202 9.86E-21 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS04160 4326af4a1bbfc931425236307944b6ea 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS04160 4326af4a1bbfc931425236307944b6ea 208 SUPERFAMILY SSF52172 3 131 4.55E-33 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS01560 8d3b788119f064827f45db5722aa59b9 393 Gene3D G3DSA:2.10.10.20 349 393 1.5E-16 T 28-03-2018 AL549_RS01560 8d3b788119f064827f45db5722aa59b9 393 SMART SM00495 350 393 7.4E-8 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS01560 8d3b788119f064827f45db5722aa59b9 393 SUPERFAMILY SSF81296 26 216 1.34E-47 T 28-03-2018 IPR014756 Immunoglobulin E-set AL549_RS01560 8d3b788119f064827f45db5722aa59b9 393 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 26 214 4.1E-35 T 28-03-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AL549_RS01560 8d3b788119f064827f45db5722aa59b9 393 SUPERFAMILY SSF51055 347 392 1.44E-12 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS01560 8d3b788119f064827f45db5722aa59b9 393 Gene3D G3DSA:2.70.50.50 26 217 9.3E-54 T 28-03-2018 AL549_RS06100 a1bab2f78fd656f07120cbedca4c652d 342 Gene3D G3DSA:2.40.50.100 140 336 3.3E-7 T 28-03-2018 AL549_RS06100 a1bab2f78fd656f07120cbedca4c652d 342 Gene3D G3DSA:1.10.287.470 96 139 1.5E-13 T 28-03-2018 AL549_RS06100 a1bab2f78fd656f07120cbedca4c652d 342 SUPERFAMILY SSF111369 42 259 3.4E-33 T 28-03-2018 AL549_RS06100 a1bab2f78fd656f07120cbedca4c652d 342 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 254 2.5E-13 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL549_RS06100 a1bab2f78fd656f07120cbedca4c652d 342 Gene3D G3DSA:3.90.1170.30 30 95 1.1E-4 T 28-03-2018 AL549_RS06100 a1bab2f78fd656f07120cbedca4c652d 342 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 26 336 3.9E-71 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL549_RS20830 5224df04ba216ef92445db76a521f0f5 650 Gene3D G3DSA:3.40.50.980 267 429 1.6E-36 T 28-03-2018 AL549_RS20830 5224df04ba216ef92445db76a521f0f5 650 Gene3D G3DSA:3.40.50.980 74 266 3.9E-54 T 28-03-2018 AL549_RS20830 5224df04ba216ef92445db76a521f0f5 650 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 2.5E-20 T 28-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AL549_RS20830 5224df04ba216ef92445db76a521f0f5 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL549_RS20830 5224df04ba216ef92445db76a521f0f5 650 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 0.0 T 28-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AL549_RS20830 5224df04ba216ef92445db76a521f0f5 650 SUPERFAMILY SSF56801 10 644 8.11E-185 T 28-03-2018 AL549_RS20830 5224df04ba216ef92445db76a521f0f5 650 Gene3D G3DSA:3.30.300.30 519 649 4.7E-27 T 28-03-2018 AL549_RS20830 5224df04ba216ef92445db76a521f0f5 650 Gene3D G3DSA:2.30.38.10 430 516 1.4E-12 T 28-03-2018 AL549_RS20830 5224df04ba216ef92445db76a521f0f5 650 Pfam PF00501 AMP-binding enzyme 84 523 1.2E-94 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL549_RS20830 5224df04ba216ef92445db76a521f0f5 650 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 53.042 T 28-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AL549_RS20830 5224df04ba216ef92445db76a521f0f5 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 8.7E-27 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL549_RS23160 795111451cfcfe04bee9730d43c306a4 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 28-03-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23160 795111451cfcfe04bee9730d43c306a4 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 1.6E-58 T 28-03-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AL549_RS23160 795111451cfcfe04bee9730d43c306a4 123 SMART SM01374 1 123 1.2E-85 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL549_RS23160 795111451cfcfe04bee9730d43c306a4 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.259 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL549_RS23160 795111451cfcfe04bee9730d43c306a4 123 SUPERFAMILY SSF50193 2 122 3.66E-51 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL549_RS23160 795111451cfcfe04bee9730d43c306a4 123 Gene3D G3DSA:2.40.150.20 1 123 9.8E-53 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL549_RS23160 795111451cfcfe04bee9730d43c306a4 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 1.6E-54 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL549_RS08105 dfb9bb75b44ce82e4837725f78b6f0bd 556 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 287 547 2.4E-76 T 28-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AL549_RS08105 dfb9bb75b44ce82e4837725f78b6f0bd 556 SUPERFAMILY SSF161098 285 537 9.03E-36 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS08105 dfb9bb75b44ce82e4837725f78b6f0bd 556 Gene3D G3DSA:1.10.3720.10 5 540 3.2E-42 T 28-03-2018 AL549_RS08105 dfb9bb75b44ce82e4837725f78b6f0bd 556 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 323 537 1.0E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS05040 a84e839c6a6d3f82120abb050f1cd953 722 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 227 239 - T 28-03-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AL549_RS05040 a84e839c6a6d3f82120abb050f1cd953 722 SMART SM00220 100 399 7.3E-36 T 28-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AL549_RS05040 a84e839c6a6d3f82120abb050f1cd953 722 Gene3D G3DSA:3.30.200.20 95 174 1.4E-17 T 28-03-2018 AL549_RS05040 a84e839c6a6d3f82120abb050f1cd953 722 Gene3D G3DSA:1.10.510.10 175 717 1.9E-41 T 28-03-2018 AL549_RS05040 a84e839c6a6d3f82120abb050f1cd953 722 SUPERFAMILY SSF56112 94 346 3.78E-53 T 28-03-2018 IPR011009 Protein kinase-like domain AL549_RS05040 a84e839c6a6d3f82120abb050f1cd953 722 Pfam PF00069 Protein kinase domain 100 317 4.1E-37 T 28-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AL549_RS22115 b73e6968fae48c86b8bc382f9a03eb98 423 SUPERFAMILY SSF103473 35 409 4.97E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS22115 b73e6968fae48c86b8bc382f9a03eb98 423 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 35 385 6.7E-69 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AL549_RS22115 b73e6968fae48c86b8bc382f9a03eb98 423 Gene3D G3DSA:1.20.1250.20 227 412 4.9E-11 T 28-03-2018 AL549_RS22115 b73e6968fae48c86b8bc382f9a03eb98 423 Gene3D G3DSA:1.20.1250.20 34 226 3.6E-32 T 28-03-2018 AL549_RS22115 b73e6968fae48c86b8bc382f9a03eb98 423 Pfam PF07690 Major Facilitator Superfamily 42 378 7.0E-48 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS22115 b73e6968fae48c86b8bc382f9a03eb98 423 ProSitePatterns PS00216 Sugar transport proteins signature 1. 91 107 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL549_RS10445 eb4e24a6fdfa6dfa8ca3dc94e820c0a6 293 Gene3D G3DSA:3.20.20.140 1 261 9.4E-48 T 28-03-2018 AL549_RS10445 eb4e24a6fdfa6dfa8ca3dc94e820c0a6 293 SMART SM00481 3 70 7.8E-17 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL549_RS10445 eb4e24a6fdfa6dfa8ca3dc94e820c0a6 293 Pfam PF02811 PHP domain 4 163 2.0E-10 T 28-03-2018 IPR004013 PHP domain GO:0003824 AL549_RS10445 eb4e24a6fdfa6dfa8ca3dc94e820c0a6 293 SUPERFAMILY SSF89550 165 275 5.49E-55 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL549_RS10445 eb4e24a6fdfa6dfa8ca3dc94e820c0a6 293 SUPERFAMILY SSF89550 1 83 5.49E-55 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL549_RS20205 22d8e0e040d6e3f97273b0fda12770a9 335 Gene3D G3DSA:3.40.50.2300 55 175 7.4E-29 T 28-03-2018 AL549_RS20205 22d8e0e040d6e3f97273b0fda12770a9 335 SUPERFAMILY SSF47413 1 59 2.44E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS20205 22d8e0e040d6e3f97273b0fda12770a9 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 1.6E-40 T 28-03-2018 AL549_RS20205 22d8e0e040d6e3f97273b0fda12770a9 335 Gene3D G3DSA:3.40.50.2300 176 312 6.1E-47 T 28-03-2018 AL549_RS20205 22d8e0e040d6e3f97273b0fda12770a9 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS20205 22d8e0e040d6e3f97273b0fda12770a9 335 SMART SM00354 1 71 8.8E-33 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS20205 22d8e0e040d6e3f97273b0fda12770a9 335 Gene3D G3DSA:1.10.260.40 2 54 7.3E-22 T 28-03-2018 AL549_RS20205 22d8e0e040d6e3f97273b0fda12770a9 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 AL549_RS20205 22d8e0e040d6e3f97273b0fda12770a9 335 SUPERFAMILY SSF53822 60 332 3.53E-88 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS20965 1bd850a174b175b398a6292e3a004ade 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.384 T 28-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AL549_RS20965 1bd850a174b175b398a6292e3a004ade 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 3.8E-53 T 28-03-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AL549_RS20965 1bd850a174b175b398a6292e3a004ade 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 28-03-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS20965 1bd850a174b175b398a6292e3a004ade 233 PIRSF PIRSF002155 1 227 1.4E-79 T 28-03-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS20965 1bd850a174b175b398a6292e3a004ade 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 2.0E-106 T 28-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AL549_RS20965 1bd850a174b175b398a6292e3a004ade 233 Gene3D G3DSA:3.30.190.20 150 228 6.4E-22 T 28-03-2018 AL549_RS20965 1bd850a174b175b398a6292e3a004ade 233 SUPERFAMILY SSF56808 6 225 3.01E-83 T 28-03-2018 IPR023674 Ribosomal protein L1-like AL549_RS20965 1bd850a174b175b398a6292e3a004ade 233 Gene3D G3DSA:3.40.50.790 68 149 5.8E-35 T 28-03-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AL549_RS20190 e7bdfcbde14910b865bd786ed4535de6 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 28-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AL549_RS20190 e7bdfcbde14910b865bd786ed4535de6 425 Pfam PF00390 Malic enzyme, N-terminal domain 30 125 4.1E-21 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL549_RS20190 e7bdfcbde14910b865bd786ed4535de6 425 SUPERFAMILY SSF53223 20 171 4.03E-52 T 28-03-2018 AL549_RS20190 e7bdfcbde14910b865bd786ed4535de6 425 SUPERFAMILY SSF51735 173 421 3.72E-79 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS20190 e7bdfcbde14910b865bd786ed4535de6 425 Gene3D G3DSA:3.40.50.10380 15 170 6.6E-36 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL549_RS20190 e7bdfcbde14910b865bd786ed4535de6 425 SMART SM01274 28 161 1.2E-75 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL549_RS20190 e7bdfcbde14910b865bd786ed4535de6 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 366 1.7E-24 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL549_RS20190 e7bdfcbde14910b865bd786ed4535de6 425 Gene3D G3DSA:3.40.50.720 171 425 2.8E-82 T 28-03-2018 AL549_RS20190 e7bdfcbde14910b865bd786ed4535de6 425 PIRSF PIRSF000106 25 425 1.5E-71 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL549_RS20190 e7bdfcbde14910b865bd786ed4535de6 425 SMART SM00919 173 409 2.2E-136 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL549_RS20320 779865bbb20783bcab07be1ec311974a 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 8.0E-62 T 28-03-2018 IPR013559 YheO-like AL549_RS20320 779865bbb20783bcab07be1ec311974a 240 Pfam PF08348 YheO-like PAS domain 31 139 8.7E-36 T 28-03-2018 IPR013559 YheO-like AL549_RS20320 779865bbb20783bcab07be1ec311974a 240 Pfam PF13309 HTH domain 174 231 6.4E-18 T 28-03-2018 AL549_RS20320 779865bbb20783bcab07be1ec311974a 240 Gene3D G3DSA:1.10.10.60 149 240 2.0E-4 T 28-03-2018 AL549_RS06010 4c6dc8171d9b7bf63151a350d5dcf8eb 292 Gene3D G3DSA:1.10.10.60 187 243 2.2E-13 T 28-03-2018 AL549_RS06010 4c6dc8171d9b7bf63151a350d5dcf8eb 292 SUPERFAMILY SSF46689 193 244 2.33E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS06010 4c6dc8171d9b7bf63151a350d5dcf8eb 292 SUPERFAMILY SSF46689 246 290 7.17E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS06010 4c6dc8171d9b7bf63151a350d5dcf8eb 292 Pfam PF12833 Helix-turn-helix domain 216 290 1.4E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS06010 4c6dc8171d9b7bf63151a350d5dcf8eb 292 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 181 1.9E-33 T 28-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal AL549_RS06010 4c6dc8171d9b7bf63151a350d5dcf8eb 292 Gene3D G3DSA:1.10.10.60 244 292 1.2E-10 T 28-03-2018 AL549_RS06010 4c6dc8171d9b7bf63151a350d5dcf8eb 292 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 247 289 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL549_RS06010 4c6dc8171d9b7bf63151a350d5dcf8eb 292 SMART SM00342 210 292 3.9E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS16375 5b4bbb5e05af16c9b7e055df553f7b2e 968 Gene3D G3DSA:2.10.109.10 842 968 1.5E-8 T 28-03-2018 AL549_RS16375 5b4bbb5e05af16c9b7e055df553f7b2e 968 Pfam PF04851 Type III restriction enzyme, res subunit 216 365 6.5E-33 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL549_RS16375 5b4bbb5e05af16c9b7e055df553f7b2e 968 Gene3D G3DSA:3.40.50.300 430 767 3.4E-19 T 28-03-2018 AL549_RS16375 5b4bbb5e05af16c9b7e055df553f7b2e 968 SMART SM00487 214 392 4.9E-17 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS16375 5b4bbb5e05af16c9b7e055df553f7b2e 968 Gene3D G3DSA:3.40.50.300 204 382 1.1E-25 T 28-03-2018 AL549_RS16375 5b4bbb5e05af16c9b7e055df553f7b2e 968 Pfam PF13091 PLD-like domain 25 161 1.8E-8 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL549_RS16375 5b4bbb5e05af16c9b7e055df553f7b2e 968 SUPERFAMILY SSF52540 264 405 8.59E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16375 5b4bbb5e05af16c9b7e055df553f7b2e 968 SUPERFAMILY SSF52540 433 558 8.59E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16375 5b4bbb5e05af16c9b7e055df553f7b2e 968 SUPERFAMILY SSF56024 15 154 4.32E-6 T 28-03-2018 AL549_RS16375 5b4bbb5e05af16c9b7e055df553f7b2e 968 Pfam PF00271 Helicase conserved C-terminal domain 436 542 1.9E-10 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS16375 5b4bbb5e05af16c9b7e055df553f7b2e 968 SMART SM00490 460 544 2.2E-8 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS16375 5b4bbb5e05af16c9b7e055df553f7b2e 968 SUPERFAMILY SSF51306 834 956 9.42E-12 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL549_RS16375 5b4bbb5e05af16c9b7e055df553f7b2e 968 Gene3D G3DSA:3.30.870.10 4 187 2.0E-13 T 28-03-2018 AL549_RS05385 ffac497f6b6ecb443179e3906a9a125d 225 Gene3D G3DSA:3.10.129.10 73 224 1.4E-24 T 28-03-2018 AL549_RS05385 ffac497f6b6ecb443179e3906a9a125d 225 SUPERFAMILY SSF54637 79 218 2.68E-28 T 28-03-2018 IPR029069 HotDog domain AL549_RS05385 ffac497f6b6ecb443179e3906a9a125d 225 Pfam PF01575 MaoC like domain 82 200 1.2E-22 T 28-03-2018 IPR002539 MaoC-like domain AL549_RS13000 3ef1ab6b5cdd3704e2117f1087f14c91 173 Gene3D G3DSA:3.40.630.30 8 160 3.9E-17 T 28-03-2018 AL549_RS13000 3ef1ab6b5cdd3704e2117f1087f14c91 173 Pfam PF13527 Acetyltransferase (GNAT) domain 9 125 7.3E-10 T 28-03-2018 AL549_RS13000 3ef1ab6b5cdd3704e2117f1087f14c91 173 SUPERFAMILY SSF55729 9 132 3.21E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS10745 dc763e25f158b50eb3f2fdf2a911b417 318 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 205 312 1.5E-19 T 28-03-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS10745 dc763e25f158b50eb3f2fdf2a911b417 318 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 11 194 4.7E-59 T 28-03-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS10745 dc763e25f158b50eb3f2fdf2a911b417 318 SUPERFAMILY SSF48019 205 317 3.74E-23 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL549_RS10745 dc763e25f158b50eb3f2fdf2a911b417 318 SUPERFAMILY SSF52540 3 192 1.45E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS10745 dc763e25f158b50eb3f2fdf2a911b417 318 Gene3D G3DSA:3.40.50.300 8 164 2.2E-25 T 28-03-2018 AL549_RS10745 dc763e25f158b50eb3f2fdf2a911b417 318 Pfam PF13177 DNA polymerase III, delta subunit 10 165 4.7E-43 T 28-03-2018 AL549_RS08600 f987f2a9480a29760405bea3e34aee44 415 SUPERFAMILY SSF53474 46 411 2.17E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS08600 f987f2a9480a29760405bea3e34aee44 415 Gene3D G3DSA:1.20.1440.110 49 150 2.0E-20 T 28-03-2018 AL549_RS08600 f987f2a9480a29760405bea3e34aee44 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 414 1.9E-235 T 28-03-2018 IPR010520 UPF0255 family AL549_RS08600 f987f2a9480a29760405bea3e34aee44 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 53.755 T 28-03-2018 IPR010520 UPF0255 family AL549_RS08600 f987f2a9480a29760405bea3e34aee44 415 Gene3D G3DSA:3.40.50.1820 151 394 2.8E-21 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS06380 577e677e394bed24d29fc5db950db1cf 185 Gene3D G3DSA:1.10.3820.10 6 185 5.0E-19 T 28-03-2018 AL549_RS06380 577e677e394bed24d29fc5db950db1cf 185 SUPERFAMILY SSF48695 8 182 1.47E-30 T 28-03-2018 IPR011031 Multihaem cytochrome AL549_RS06380 577e677e394bed24d29fc5db950db1cf 185 PIRSF PIRSF000013 1 185 7.3E-71 T 28-03-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 AL549_RS06380 577e677e394bed24d29fc5db950db1cf 185 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 9 182 6.6E-57 T 28-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AL549_RS21975 119be8a4715cff079418a5c3a4e4a616 367 SUPERFAMILY SSF102405 81 286 4.27E-40 T 28-03-2018 AL549_RS21975 119be8a4715cff079418a5c3a4e4a616 367 Pfam PF02481 DNA recombination-mediator protein A 76 278 1.7E-74 T 28-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AL549_RS21975 119be8a4715cff079418a5c3a4e4a616 367 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 75 286 2.8E-77 T 28-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AL549_RS21975 119be8a4715cff079418a5c3a4e4a616 367 Gene3D G3DSA:3.40.50.450 113 251 4.5E-40 T 28-03-2018 AL549_RS21975 119be8a4715cff079418a5c3a4e4a616 367 Gene3D G3DSA:1.10.10.10 252 363 3.7E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS11845 cfd75ea9f3c0bcd8e1158625f07769a7 398 Gene3D G3DSA:3.30.70.270 229 398 2.0E-48 T 28-03-2018 AL549_RS11845 cfd75ea9f3c0bcd8e1158625f07769a7 398 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 234 397 7.2E-44 T 28-03-2018 IPR000160 GGDEF domain AL549_RS11845 cfd75ea9f3c0bcd8e1158625f07769a7 398 SUPERFAMILY SSF55073 243 397 1.57E-43 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS11845 cfd75ea9f3c0bcd8e1158625f07769a7 398 Pfam PF00990 Diguanylate cyclase, GGDEF domain 240 393 1.6E-42 T 28-03-2018 IPR000160 GGDEF domain AL549_RS11845 cfd75ea9f3c0bcd8e1158625f07769a7 398 SMART SM00267 227 397 1.4E-55 T 28-03-2018 IPR000160 GGDEF domain AL549_RS02310 dc65ce9a45ace95850d7b075e91ecd0f 389 Gene3D G3DSA:1.50.10.10 15 387 2.3E-80 T 28-03-2018 AL549_RS02310 dc65ce9a45ace95850d7b075e91ecd0f 389 Pfam PF07470 Glycosyl Hydrolase Family 88 47 379 1.5E-25 T 28-03-2018 IPR010905 Glycosyl hydrolase, family 88 AL549_RS02310 dc65ce9a45ace95850d7b075e91ecd0f 389 SUPERFAMILY SSF48208 20 389 1.47E-98 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL549_RS07525 87c6eb2c6a78c071370b29dcf215c344 453 Gene3D G3DSA:3.40.1190.10 90 311 5.5E-58 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL549_RS07525 87c6eb2c6a78c071370b29dcf215c344 453 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 448 3.9E-144 T 28-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS07525 87c6eb2c6a78c071370b29dcf215c344 453 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 449 33.204 T 28-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS07525 87c6eb2c6a78c071370b29dcf215c344 453 SUPERFAMILY SSF63418 1 96 5.49E-24 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL549_RS07525 87c6eb2c6a78c071370b29dcf215c344 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 395 1.4E-12 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL549_RS07525 87c6eb2c6a78c071370b29dcf215c344 453 Pfam PF01225 Mur ligase family, catalytic domain 27 84 1.8E-7 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL549_RS07525 87c6eb2c6a78c071370b29dcf215c344 453 SUPERFAMILY SSF53623 100 311 8.11E-58 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL549_RS07525 87c6eb2c6a78c071370b29dcf215c344 453 SUPERFAMILY SSF53244 314 448 1.22E-34 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL549_RS07525 87c6eb2c6a78c071370b29dcf215c344 453 Gene3D G3DSA:3.90.190.20 314 453 9.0E-37 T 28-03-2018 AL549_RS07525 87c6eb2c6a78c071370b29dcf215c344 453 Pfam PF08245 Mur ligase middle domain 105 293 1.0E-48 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL549_RS07525 87c6eb2c6a78c071370b29dcf215c344 453 Gene3D G3DSA:3.40.1390.10 1 89 3.0E-23 T 28-03-2018 AL549_RS02315 77da9761eacb5b5dddf0d2abbe6886f9 728 TIGRFAM TIGR02336 TIGR02336: 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase 6 727 0.0 T 28-03-2018 IPR012711 Lacto-N-biose phosphorylase/D-galactosyl-beta-1->4-L-rhamnose phosphorylase GO:0004645 AL549_RS02315 77da9761eacb5b5dddf0d2abbe6886f9 728 SUPERFAMILY SSF52317 475 665 3.43E-18 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS02315 77da9761eacb5b5dddf0d2abbe6886f9 728 Pfam PF17385 Lacto-N-biose phosphorylase central domain 444 669 1.0E-78 T 28-03-2018 IPR035363 Lacto-N-biose phosphorylase, central domain AL549_RS02315 77da9761eacb5b5dddf0d2abbe6886f9 728 Gene3D G3DSA:3.20.20.80 139 435 1.5E-119 T 28-03-2018 AL549_RS02315 77da9761eacb5b5dddf0d2abbe6886f9 728 Gene3D G3DSA:3.20.20.80 27 138 4.3E-18 T 28-03-2018 AL549_RS02315 77da9761eacb5b5dddf0d2abbe6886f9 728 Pfam PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain 9 439 9.3E-181 T 28-03-2018 IPR035080 Lacto-N-biose phosphorylase-like, N-terminal TIM barrel domain AL549_RS02315 77da9761eacb5b5dddf0d2abbe6886f9 728 Gene3D G3DSA:3.40.50.880 604 671 5.1E-11 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS02315 77da9761eacb5b5dddf0d2abbe6886f9 728 Gene3D G3DSA:3.40.50.880 441 603 1.1E-55 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS02315 77da9761eacb5b5dddf0d2abbe6886f9 728 Pfam PF17386 Lacto-N-biose phosphorylase C-terminal domain 674 726 7.2E-19 T 28-03-2018 IPR035356 Lacto-N-biose phosphorylase, C-terminal domain AL549_RS02315 77da9761eacb5b5dddf0d2abbe6886f9 728 Gene3D G3DSA:2.60.40.1180 674 727 5.3E-16 T 28-03-2018 AL549_RS04490 be23ee9685fdcd9802f03095a660dae7 294 Pfam PF00510 Cytochrome c oxidase subunit III 8 293 1.7E-49 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04490 be23ee9685fdcd9802f03095a660dae7 294 Gene3D G3DSA:1.10.287.70 1 78 3.0E-20 T 28-03-2018 AL549_RS04490 be23ee9685fdcd9802f03095a660dae7 294 Gene3D G3DSA:1.20.120.80 79 294 9.7E-64 T 28-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04490 be23ee9685fdcd9802f03095a660dae7 294 SUPERFAMILY SSF81452 3 294 7.72E-78 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS16785 ae3216cbbe412c2fd32620e3bcfe7b04 166 SUPERFAMILY SSF116960 1 166 1.83E-62 T 28-03-2018 AL549_RS16785 ae3216cbbe412c2fd32620e3bcfe7b04 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 9.0E-96 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AL549_RS16785 ae3216cbbe412c2fd32620e3bcfe7b04 166 Gene3D G3DSA:1.10.3190.10 54 166 9.0E-42 T 28-03-2018 IPR023146 YfbU, alpha-helical bundle domain AL549_RS16785 ae3216cbbe412c2fd32620e3bcfe7b04 166 Gene3D G3DSA:1.10.287.680 1 47 5.0E-25 T 28-03-2018 IPR023145 YfbU, helix-hairpin domain AL549_RS16785 ae3216cbbe412c2fd32620e3bcfe7b04 166 PIRSF PIRSF006272 1 166 3.6E-76 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AL549_RS16785 ae3216cbbe412c2fd32620e3bcfe7b04 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 39.844 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AL549_RS16785 ae3216cbbe412c2fd32620e3bcfe7b04 166 Pfam PF03887 YfbU domain 1 166 4.3E-70 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AL549_RS21900 eaf944fc14849ac848e97333e66081a1 507 SUPERFAMILY SSF54211 2 169 2.96E-30 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS21900 eaf944fc14849ac848e97333e66081a1 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.6E-5 T 28-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AL549_RS21900 eaf944fc14849ac848e97333e66081a1 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.6E-5 T 28-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AL549_RS21900 eaf944fc14849ac848e97333e66081a1 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.6E-5 T 28-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AL549_RS21900 eaf944fc14849ac848e97333e66081a1 507 Gene3D G3DSA:3.30.230.10 3 181 8.7E-39 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL549_RS21900 eaf944fc14849ac848e97333e66081a1 507 SMART SM00382 210 390 9.0E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS21900 eaf944fc14849ac848e97333e66081a1 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 2.2E-90 T 28-03-2018 IPR000523 Magnesium chelatase ChlI domain AL549_RS21900 eaf944fc14849ac848e97333e66081a1 507 Gene3D G3DSA:3.40.50.300 182 431 6.5E-22 T 28-03-2018 AL549_RS21900 eaf944fc14849ac848e97333e66081a1 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 2.0E-209 T 28-03-2018 IPR004482 Mg chelatase-related protein AL549_RS21900 eaf944fc14849ac848e97333e66081a1 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.9E-47 T 28-03-2018 AL549_RS21900 eaf944fc14849ac848e97333e66081a1 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 1.4E-31 T 28-03-2018 IPR025158 Mg chelatase-related protein, C-terminal domain AL549_RS21900 eaf944fc14849ac848e97333e66081a1 507 SUPERFAMILY SSF52540 187 500 1.91E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS19615 7d95f949944955a88e7be5ba8f2f11a1 101 SUPERFAMILY SSF52794 1 101 9.68E-36 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS19615 7d95f949944955a88e7be5ba8f2f11a1 101 Gene3D G3DSA:3.40.50.2300 2 101 1.2E-37 T 28-03-2018 AL549_RS19615 7d95f949944955a88e7be5ba8f2f11a1 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 4.7E-24 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 SUPERFAMILY SSF53850 61 273 4.2E-23 T 28-03-2018 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 Gene3D G3DSA:3.40.190.10 291 512 4.3E-13 T 28-03-2018 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 Gene3D G3DSA:3.40.50.2300 1009 1114 6.5E-30 T 28-03-2018 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 SMART SM00387 802 913 1.4E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 81 263 1.3E-18 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 298 504 6.8E-12 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 SUPERFAMILY SSF47384 676 756 7.85E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 Gene3D G3DSA:3.30.450.20 540 688 5.3E-10 T 28-03-2018 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 Gene3D G3DSA:3.40.190.10 141 230 2.9E-4 T 28-03-2018 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 SUPERFAMILY SSF53850 294 510 7.06E-19 T 28-03-2018 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 Pfam PF00512 His Kinase A (phospho-acceptor) domain 690 754 2.0E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 SMART SM00448 993 1109 3.4E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 Pfam PF00072 Response regulator receiver domain 995 1108 8.8E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 SMART SM00388 690 755 8.2E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 803 911 8.3E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 SUPERFAMILY SSF47226 1092 1196 1.57E-8 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 SMART SM00062 295 510 0.0035 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 SMART SM00062 60 280 1.2E-7 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 Gene3D G3DSA:1.10.287.130 689 751 2.4E-16 T 28-03-2018 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 Gene3D G3DSA:1.20.120.160 1115 1217 1.1E-5 T 28-03-2018 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 SUPERFAMILY SSF52172 994 1121 4.98E-32 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 Gene3D G3DSA:3.40.190.10 49 140 1.2E-7 T 28-03-2018 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 PRINTS PR00344 Bacterial sensor protein C-terminal signature 897 910 3.0E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 PRINTS PR00344 Bacterial sensor protein C-terminal signature 873 891 3.0E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 PRINTS PR00344 Bacterial sensor protein C-terminal signature 856 866 3.0E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 PRINTS PR00344 Bacterial sensor protein C-terminal signature 838 852 3.0E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 Pfam PF01627 Hpt domain 1127 1216 1.7E-6 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 Gene3D G3DSA:3.30.565.10 774 1008 9.9E-46 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS06350 13914447fd7220a56d8ac4cc620d0dde 1223 SUPERFAMILY SSF55874 744 911 2.88E-42 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 Pfam PF01627 Hpt domain 897 969 1.2E-12 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 Pfam PF00072 Response regulator receiver domain 729 842 2.0E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 SUPERFAMILY SSF52172 726 850 3.7E-32 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 SMART SM00388 484 549 8.8E-23 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 SMART SM00387 596 709 7.1E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 Gene3D G3DSA:1.20.120.160 867 984 8.3E-15 T 28-03-2018 AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 Gene3D G3DSA:3.30.565.10 553 715 1.9E-48 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 SUPERFAMILY SSF47226 874 983 3.93E-20 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 SUPERFAMILY SSF47384 473 550 1.18E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 PIRSF PIRSF036437 15 984 0.0 T 28-03-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 649 1.4E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 PRINTS PR00344 Bacterial sensor protein C-terminal signature 693 706 1.4E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 663 1.4E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 PRINTS PR00344 Bacterial sensor protein C-terminal signature 669 687 1.4E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 21 980 0.0 T 28-03-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 SUPERFAMILY SSF55874 538 713 8.91E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 Gene3D G3DSA:1.10.287.130 475 545 8.4E-19 T 28-03-2018 AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 SMART SM00448 727 842 6.6E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 SMART SM00073 887 983 1.2E-5 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 Pfam PF00512 His Kinase A (phospho-acceptor) domain 484 549 6.1E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 596 708 2.0E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS06405 52f099cd670f1183940ee831ba40433f 984 Gene3D G3DSA:3.40.50.2300 719 859 8.0E-33 T 28-03-2018 AL549_RS16970 3613d7323d3428f2bd8ea8fd34830650 350 SUPERFAMILY SSF55073 200 343 3.84E-34 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS16970 3613d7323d3428f2bd8ea8fd34830650 350 SMART SM00267 184 344 2.7E-43 T 28-03-2018 IPR000160 GGDEF domain AL549_RS16970 3613d7323d3428f2bd8ea8fd34830650 350 Pfam PF00990 Diguanylate cyclase, GGDEF domain 196 339 1.0E-33 T 28-03-2018 IPR000160 GGDEF domain AL549_RS16970 3613d7323d3428f2bd8ea8fd34830650 350 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 191 343 1.3E-33 T 28-03-2018 IPR000160 GGDEF domain AL549_RS16970 3613d7323d3428f2bd8ea8fd34830650 350 Gene3D G3DSA:3.30.70.270 185 345 7.7E-39 T 28-03-2018 AL549_RS19170 f3575341d8d9c74025d676f709a1489e 137 SUPERFAMILY SSF53850 16 125 5.43E-8 T 28-03-2018 AL549_RS19170 f3575341d8d9c74025d676f709a1489e 137 Gene3D G3DSA:3.40.190.10 20 134 3.6E-7 T 28-03-2018 AL549_RS08195 62945cba300701ad2f9ccc62c2cf7dc0 618 PRINTS PR00702 Acriflavin resistance protein family signature 581 604 3.6E-5 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS08195 62945cba300701ad2f9ccc62c2cf7dc0 618 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 3.6E-5 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS08195 62945cba300701ad2f9ccc62c2cf7dc0 618 PRINTS PR00702 Acriflavin resistance protein family signature 506 530 3.6E-5 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS08195 62945cba300701ad2f9ccc62c2cf7dc0 618 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 618 49.638 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AL549_RS08195 62945cba300701ad2f9ccc62c2cf7dc0 618 Pfam PF07549 SecD/SecF GG Motif 115 141 3.6E-7 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL549_RS08195 62945cba300701ad2f9ccc62c2cf7dc0 618 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 604 2.6E-151 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AL549_RS08195 62945cba300701ad2f9ccc62c2cf7dc0 618 Pfam PF13721 SecD export protein N-terminal TM region 2 103 1.4E-37 T 28-03-2018 IPR027398 SecD export protein N-terminal TM domain AL549_RS08195 62945cba300701ad2f9ccc62c2cf7dc0 618 Pfam PF02355 Protein export membrane protein 436 597 5.3E-19 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL549_RS08195 62945cba300701ad2f9ccc62c2cf7dc0 618 Gene3D G3DSA:1.20.1640.10 391 609 3.0E-30 T 28-03-2018 AL549_RS08195 62945cba300701ad2f9ccc62c2cf7dc0 618 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 597 1.3E-82 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL549_RS08195 62945cba300701ad2f9ccc62c2cf7dc0 618 SUPERFAMILY SSF82866 413 609 4.19E-45 T 28-03-2018 AL549_RS20635 a465c6f9004e9a2b192e26c311e024da 387 Gene3D G3DSA:1.20.5.170 42 131 2.5E-8 T 28-03-2018 AL549_RS20635 a465c6f9004e9a2b192e26c311e024da 387 SUPERFAMILY SSF51261 162 385 5.23E-47 T 28-03-2018 IPR011055 Duplicated hybrid motif AL549_RS20635 a465c6f9004e9a2b192e26c311e024da 387 Pfam PF01551 Peptidase family M23 288 381 3.2E-24 T 28-03-2018 IPR016047 Peptidase M23 AL549_RS20635 a465c6f9004e9a2b192e26c311e024da 387 Gene3D G3DSA:2.70.70.10 162 387 3.3E-34 T 28-03-2018 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 Gene3D G3DSA:2.60.40.10 217 329 2.7E-20 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 48 215 5.1E-55 T 28-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 SUPERFAMILY SSF74650 737 1028 4.55E-90 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 443 457 - T 28-03-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 SUPERFAMILY SSF49303 219 329 1.06E-21 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 Gene3D G3DSA:2.60.120.260 1 215 7.1E-67 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 Gene3D G3DSA:2.70.98.10 733 1029 3.0E-81 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 SUPERFAMILY SSF49785 9 215 1.56E-64 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 Pfam PF02929 Beta galactosidase small chain 757 1025 1.4E-63 T 28-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 Pfam PF00703 Glycosyl hydrolases family 2 219 329 4.0E-15 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 SMART SM01038 753 1027 1.4E-98 T 28-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 Gene3D G3DSA:3.20.20.80 330 620 1.0E-85 T 28-03-2018 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 SUPERFAMILY SSF49303 633 727 2.54E-25 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 Gene3D G3DSA:2.60.40.10 623 726 6.2E-22 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 Pfam PF16353 Domain of unknown function(DUF4981) 638 723 5.1E-19 T 28-03-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 PRINTS PR00132 Glycosyl hydrolase family 2 signature 340 354 3.2E-38 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 PRINTS PR00132 Glycosyl hydrolase family 2 signature 527 542 3.2E-38 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 PRINTS PR00132 Glycosyl hydrolase family 2 signature 371 389 3.2E-38 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 PRINTS PR00132 Glycosyl hydrolase family 2 signature 443 458 3.2E-38 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 PRINTS PR00132 Glycosyl hydrolase family 2 signature 143 158 3.2E-38 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 331 623 4.6E-111 T 28-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 Hamap MF_01687 Beta-galactosidase [lacZ]. 2 1029 16.997 T 28-03-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL549_RS01265 b24acf226f74198bdcdef42b651f0894 1031 SUPERFAMILY SSF51445 330 618 4.94E-99 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS19400 fb94ce4335a824390915b33906938c9b 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL549_RS19400 fb94ce4335a824390915b33906938c9b 345 Gene3D G3DSA:3.40.50.300 121 273 3.9E-29 T 28-03-2018 AL549_RS19400 fb94ce4335a824390915b33906938c9b 345 Gene3D G3DSA:3.40.50.300 274 343 8.8E-12 T 28-03-2018 AL549_RS19400 fb94ce4335a824390915b33906938c9b 345 SUPERFAMILY SSF52540 5 335 1.59E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS19400 fb94ce4335a824390915b33906938c9b 345 Gene3D G3DSA:3.30.450.90 1 100 4.5E-26 T 28-03-2018 AL549_RS19400 fb94ce4335a824390915b33906938c9b 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 333 1.4E-152 T 28-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 AL549_RS19400 fb94ce4335a824390915b33906938c9b 345 Pfam PF00437 Type II/IV secretion system protein 12 270 4.2E-46 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL549_RS08760 619619b0cdcce0f5027d9fc6a5863d02 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS08760 619619b0cdcce0f5027d9fc6a5863d02 344 SUPERFAMILY SSF55021 248 343 1.14E-26 T 28-03-2018 AL549_RS08760 619619b0cdcce0f5027d9fc6a5863d02 344 Pfam PF09383 NIL domain 268 339 2.0E-21 T 28-03-2018 IPR018449 NIL domain AL549_RS08760 619619b0cdcce0f5027d9fc6a5863d02 344 Gene3D G3DSA:3.30.70.260 254 344 7.3E-28 T 28-03-2018 AL549_RS08760 619619b0cdcce0f5027d9fc6a5863d02 344 SMART SM00382 30 235 7.3E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS08760 619619b0cdcce0f5027d9fc6a5863d02 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 6.1E-199 T 28-03-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 AL549_RS08760 619619b0cdcce0f5027d9fc6a5863d02 344 Pfam PF00005 ABC transporter 21 169 1.3E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS08760 619619b0cdcce0f5027d9fc6a5863d02 344 SMART SM00930 265 340 1.5E-29 T 28-03-2018 IPR018449 NIL domain AL549_RS08760 619619b0cdcce0f5027d9fc6a5863d02 344 SUPERFAMILY SSF52540 1 239 2.21E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS08760 619619b0cdcce0f5027d9fc6a5863d02 344 Gene3D G3DSA:3.40.50.300 1 253 1.2E-74 T 28-03-2018 AL549_RS23185 4a0d61b8b8d7e489cd4f1d0743d78d99 177 PIRSF PIRSF002162 1 177 1.1E-42 T 28-03-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23185 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Pfam PF00347 Ribosomal protein L6 11 82 8.1E-21 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23185 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Pfam PF00347 Ribosomal protein L6 91 164 2.0E-17 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23185 4a0d61b8b8d7e489cd4f1d0743d78d99 177 SUPERFAMILY SSF56053 1 82 4.68E-25 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23185 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.168 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL549_RS23185 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Gene3D G3DSA:3.90.930.12 5 85 9.8E-27 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23185 4a0d61b8b8d7e489cd4f1d0743d78d99 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.4E-33 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL549_RS23185 4a0d61b8b8d7e489cd4f1d0743d78d99 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.4E-33 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL549_RS23185 4a0d61b8b8d7e489cd4f1d0743d78d99 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.4E-33 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL549_RS23185 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Gene3D G3DSA:3.90.930.12 86 177 6.8E-38 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23185 4a0d61b8b8d7e489cd4f1d0743d78d99 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 28-03-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23185 4a0d61b8b8d7e489cd4f1d0743d78d99 177 SUPERFAMILY SSF56053 83 177 2.88E-34 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23185 4a0d61b8b8d7e489cd4f1d0743d78d99 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.3E-73 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL549_RS09900 ce7864d3a65e3ae0599bfa8c499d75c9 440 Gene3D G3DSA:3.60.120.10 3 432 1.6E-93 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AL549_RS09900 ce7864d3a65e3ae0599bfa8c499d75c9 440 Hamap MF_01935 Isochorismate synthase MenF [menF]. 8 432 31.892 T 28-03-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AL549_RS09900 ce7864d3a65e3ae0599bfa8c499d75c9 440 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 90 429 9.7E-101 T 28-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AL549_RS09900 ce7864d3a65e3ae0599bfa8c499d75c9 440 SUPERFAMILY SSF56322 29 430 2.35E-103 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AL549_RS09900 ce7864d3a65e3ae0599bfa8c499d75c9 440 Pfam PF00425 chorismate binding enzyme 169 422 4.1E-71 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AL549_RS19675 780b68140e2b4dd34088dc55b097863a 164 Gene3D G3DSA:3.40.630.30 1 153 1.4E-22 T 28-03-2018 AL549_RS19675 780b68140e2b4dd34088dc55b097863a 164 SUPERFAMILY SSF55729 5 162 1.34E-28 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS19675 780b68140e2b4dd34088dc55b097863a 164 Pfam PF13508 Acetyltransferase (GNAT) domain 58 142 8.8E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS17385 3c0e441507c605553ba5910991cca358 246 PIRSF PIRSF002884 13 246 2.7E-96 T 28-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AL549_RS17385 3c0e441507c605553ba5910991cca358 246 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 246 3.7E-75 T 28-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AL549_RS17385 3c0e441507c605553ba5910991cca358 246 SUPERFAMILY SSF75708 27 245 1.7E-65 T 28-03-2018 AL549_RS17385 3c0e441507c605553ba5910991cca358 246 Gene3D G3DSA:1.10.287.500 56 189 2.9E-17 T 28-03-2018 AL549_RS05735 71b58465adb7e128d26eccb26935ed8e 712 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 27 712 2.6E-196 T 28-03-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AL549_RS05735 71b58465adb7e128d26eccb26935ed8e 712 Gene3D G3DSA:2.170.130.10 18 161 4.3E-31 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL549_RS05735 71b58465adb7e128d26eccb26935ed8e 712 Gene3D G3DSA:2.40.170.20 162 712 6.1E-75 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL549_RS05735 71b58465adb7e128d26eccb26935ed8e 712 SUPERFAMILY SSF56935 30 712 2.82E-113 T 28-03-2018 AL549_RS05735 71b58465adb7e128d26eccb26935ed8e 712 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 28 712 5.2E-197 T 28-03-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AL549_RS05735 71b58465adb7e128d26eccb26935ed8e 712 Pfam PF00593 TonB dependent receptor 245 710 4.4E-61 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL549_RS05735 71b58465adb7e128d26eccb26935ed8e 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 152 4.9E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL549_RS11035 25f6cca024b9bd0fcd7f5bfa04ddf55e 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL549_RS11035 25f6cca024b9bd0fcd7f5bfa04ddf55e 241 Pfam PF00106 short chain dehydrogenase 3 182 1.6E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS11035 25f6cca024b9bd0fcd7f5bfa04ddf55e 241 Gene3D G3DSA:3.40.50.720 147 217 1.4E-8 T 28-03-2018 AL549_RS11035 25f6cca024b9bd0fcd7f5bfa04ddf55e 241 Gene3D G3DSA:3.40.50.720 2 146 2.8E-30 T 28-03-2018 AL549_RS11035 25f6cca024b9bd0fcd7f5bfa04ddf55e 241 SUPERFAMILY SSF51735 4 235 5.82E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS11035 25f6cca024b9bd0fcd7f5bfa04ddf55e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 9.5E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS11035 25f6cca024b9bd0fcd7f5bfa04ddf55e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 9.5E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS11035 25f6cca024b9bd0fcd7f5bfa04ddf55e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 9.5E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS11395 aa3ebe23b6afbc20fa0224d7dfb0ae3e 587 SUPERFAMILY SSF161098 25 295 1.31E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS11395 aa3ebe23b6afbc20fa0224d7dfb0ae3e 587 Gene3D G3DSA:1.10.3720.10 67 300 2.1E-19 T 28-03-2018 AL549_RS11395 aa3ebe23b6afbc20fa0224d7dfb0ae3e 587 SUPERFAMILY SSF161098 319 558 5.12E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS11395 aa3ebe23b6afbc20fa0224d7dfb0ae3e 587 Gene3D G3DSA:1.10.3720.10 355 566 3.5E-12 T 28-03-2018 AL549_RS18810 eb4127eefb750be8e839d44aa598b706 238 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 229 3.2E-75 T 28-03-2018 IPR005224 Sugar fermentation stimulation protein AL549_RS18810 eb4127eefb750be8e839d44aa598b706 238 Pfam PF03749 Sugar fermentation stimulation protein 14 229 1.4E-76 T 28-03-2018 IPR005224 Sugar fermentation stimulation protein AL549_RS18810 eb4127eefb750be8e839d44aa598b706 238 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 237 54.071 T 28-03-2018 IPR005224 Sugar fermentation stimulation protein AL549_RS20230 1182860fec68453a478cde89bc14cc43 173 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 8.5E-69 T 28-03-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AL549_RS20230 1182860fec68453a478cde89bc14cc43 173 SUPERFAMILY SSF89562 2 158 6.02E-48 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL549_RS20230 1182860fec68453a478cde89bc14cc43 173 Gene3D G3DSA:3.50.30.40 1 170 8.7E-41 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL549_RS20230 1182860fec68453a478cde89bc14cc43 173 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 159 1.6E-81 T 28-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AL549_RS20230 1182860fec68453a478cde89bc14cc43 173 Pfam PF03737 Aldolase/RraA 6 152 2.1E-40 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL549_RS20230 1182860fec68453a478cde89bc14cc43 173 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.777 T 28-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AL549_RS05545 c2d9c9029b37a1ec5b15c71bedb15125 155 Pfam PF04143 Sulphur transport 47 140 2.8E-6 T 28-03-2018 IPR007272 Sulphur transport domain AL549_RS11140 866250307c8793e8ef2efef9d3bbaa65 257 Pfam PF00977 Histidine biosynthesis protein 5 239 1.9E-79 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 AL549_RS11140 866250307c8793e8ef2efef9d3bbaa65 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 4.9E-115 T 28-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AL549_RS11140 866250307c8793e8ef2efef9d3bbaa65 257 Gene3D G3DSA:3.20.20.70 4 252 2.0E-58 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS11140 866250307c8793e8ef2efef9d3bbaa65 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.972 T 28-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AL549_RS11140 866250307c8793e8ef2efef9d3bbaa65 257 SUPERFAMILY SSF51366 1 256 1.26E-74 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL549_RS06180 7cf793127e1ed050462885255ae5b7a1 368 Pfam PF13776 Domain of unknown function (DUF4172) 2 82 8.5E-28 T 28-03-2018 IPR025230 Domain of unknown function DUF4172 AL549_RS06180 7cf793127e1ed050462885255ae5b7a1 368 SUPERFAMILY SSF140931 94 293 4.32E-38 T 28-03-2018 IPR003812 Fido domain AL549_RS06180 7cf793127e1ed050462885255ae5b7a1 368 Gene3D G3DSA:1.10.10.10 298 364 3.1E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS06180 7cf793127e1ed050462885255ae5b7a1 368 Gene3D G3DSA:1.10.3290.10 36 295 5.0E-46 T 28-03-2018 IPR003812 Fido domain AL549_RS06180 7cf793127e1ed050462885255ae5b7a1 368 Pfam PF02661 Fic/DOC family 111 223 3.4E-15 T 28-03-2018 IPR003812 Fido domain AL549_RS08540 bfb594c213b7b5a1fb889842c904e5f2 294 SUPERFAMILY SSF46785 6 90 2.54E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS08540 bfb594c213b7b5a1fb889842c904e5f2 294 Gene3D G3DSA:3.40.190.10 178 260 1.1E-24 T 28-03-2018 AL549_RS08540 bfb594c213b7b5a1fb889842c904e5f2 294 Gene3D G3DSA:1.10.10.10 2 86 1.5E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS08540 bfb594c213b7b5a1fb889842c904e5f2 294 Pfam PF03466 LysR substrate binding domain 90 290 1.1E-44 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS08540 bfb594c213b7b5a1fb889842c904e5f2 294 SUPERFAMILY SSF53850 91 291 2.17E-46 T 28-03-2018 AL549_RS08540 bfb594c213b7b5a1fb889842c904e5f2 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 65 1.5E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS08540 bfb594c213b7b5a1fb889842c904e5f2 294 Gene3D G3DSA:3.40.190.10 88 177 2.1E-17 T 28-03-2018 AL549_RS16425 6b071fa0a779e81349f4e0fff10bcd28 260 Gene3D G3DSA:1.25.40.10 138 216 5.7E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS16425 6b071fa0a779e81349f4e0fff10bcd28 260 Pfam PF07719 Tetratricopeptide repeat 217 249 1.2E-5 T 28-03-2018 IPR013105 Tetratricopeptide repeat 2 AL549_RS16425 6b071fa0a779e81349f4e0fff10bcd28 260 Gene3D G3DSA:1.20.5.170 40 127 0.0019 T 28-03-2018 AL549_RS16425 6b071fa0a779e81349f4e0fff10bcd28 260 SMART SM00028 217 250 0.0034 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS16425 6b071fa0a779e81349f4e0fff10bcd28 260 SMART SM00028 181 214 33.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS16425 6b071fa0a779e81349f4e0fff10bcd28 260 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 260 17.088 T 28-03-2018 IPR034706 Cell division coordinator CpoB GO:0051301 AL549_RS16425 6b071fa0a779e81349f4e0fff10bcd28 260 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 144 260 1.8E-35 T 28-03-2018 IPR014162 Cell division coordinator CpoB, C-terminal AL549_RS16425 6b071fa0a779e81349f4e0fff10bcd28 260 Gene3D G3DSA:1.25.40.10 217 260 2.6E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS16425 6b071fa0a779e81349f4e0fff10bcd28 260 Pfam PF16331 TolA binding protein trimerisation 50 121 4.5E-25 T 28-03-2018 IPR032519 YbgF, trimerisation domain GO:0070206 AL549_RS16425 6b071fa0a779e81349f4e0fff10bcd28 260 SUPERFAMILY SSF48452 143 256 4.38E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS16425 6b071fa0a779e81349f4e0fff10bcd28 260 Pfam PF13432 Tetratricopeptide repeat 155 207 8.9E-9 T 28-03-2018 AL549_RS17375 30e02f5c5293edc4adad7bcca3c8dbf2 376 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 374 38.585 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL549_RS17375 30e02f5c5293edc4adad7bcca3c8dbf2 376 SUPERFAMILY SSF52172 2 109 1.39E-26 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS17375 30e02f5c5293edc4adad7bcca3c8dbf2 376 Gene3D G3DSA:3.40.50.2300 2 153 2.5E-29 T 28-03-2018 AL549_RS17375 30e02f5c5293edc4adad7bcca3c8dbf2 376 Pfam PF01339 CheB methylesterase 191 368 4.8E-58 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL549_RS17375 30e02f5c5293edc4adad7bcca3c8dbf2 376 PIRSF PIRSF000876 1 374 2.2E-126 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL549_RS17375 30e02f5c5293edc4adad7bcca3c8dbf2 376 Gene3D G3DSA:3.40.50.180 178 373 1.1E-68 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL549_RS17375 30e02f5c5293edc4adad7bcca3c8dbf2 376 Pfam PF00072 Response regulator receiver domain 5 109 6.3E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS17375 30e02f5c5293edc4adad7bcca3c8dbf2 376 SMART SM00448 3 126 2.7E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS17375 30e02f5c5293edc4adad7bcca3c8dbf2 376 SUPERFAMILY SSF52738 185 370 1.7E-62 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL549_RS09560 e6b048ae88ef52577a7a24b44087929a 277 Gene3D G3DSA:3.30.70.260 1 82 1.9E-10 T 28-03-2018 AL549_RS09560 e6b048ae88ef52577a7a24b44087929a 277 SUPERFAMILY SSF53328 82 276 1.31E-59 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL549_RS09560 e6b048ae88ef52577a7a24b44087929a 277 Pfam PF00551 Formyl transferase 82 259 2.2E-47 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL549_RS09560 e6b048ae88ef52577a7a24b44087929a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 7.7E-65 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL549_RS09560 e6b048ae88ef52577a7a24b44087929a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 7.7E-65 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL549_RS09560 e6b048ae88ef52577a7a24b44087929a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 7.7E-65 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL549_RS09560 e6b048ae88ef52577a7a24b44087929a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 7.7E-65 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL549_RS09560 e6b048ae88ef52577a7a24b44087929a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 7.7E-65 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL549_RS09560 e6b048ae88ef52577a7a24b44087929a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 7.7E-65 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL549_RS09560 e6b048ae88ef52577a7a24b44087929a 277 PIRSF PIRSF036480 1 277 1.2E-111 T 28-03-2018 AL549_RS09560 e6b048ae88ef52577a7a24b44087929a 277 Gene3D G3DSA:3.40.50.170 83 277 1.9E-53 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL549_RS09560 e6b048ae88ef52577a7a24b44087929a 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 44.723 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL549_RS09560 e6b048ae88ef52577a7a24b44087929a 277 Pfam PF01842 ACT domain 5 52 2.2E-6 T 28-03-2018 IPR002912 ACT domain AL549_RS09560 e6b048ae88ef52577a7a24b44087929a 277 SUPERFAMILY SSF55021 4 54 3.04E-8 T 28-03-2018 AL549_RS09560 e6b048ae88ef52577a7a24b44087929a 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 8.5E-122 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL549_RS15415 54ca67ad3da92f8c75f290705025e9fe 221 PRINTS PR01021 OMPA domain signature 162 178 8.3E-10 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS15415 54ca67ad3da92f8c75f290705025e9fe 221 PRINTS PR01021 OMPA domain signature 117 139 8.3E-10 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS15415 54ca67ad3da92f8c75f290705025e9fe 221 PRINTS PR01021 OMPA domain signature 147 162 8.3E-10 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS15415 54ca67ad3da92f8c75f290705025e9fe 221 Pfam PF13488 Glycine zipper 38 85 3.9E-12 T 28-03-2018 AL549_RS15415 54ca67ad3da92f8c75f290705025e9fe 221 Pfam PF00691 OmpA family 117 211 2.1E-18 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS15415 54ca67ad3da92f8c75f290705025e9fe 221 Gene3D G3DSA:3.30.1330.60 79 221 2.6E-35 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS15415 54ca67ad3da92f8c75f290705025e9fe 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 162 179 7.0E-5 T 28-03-2018 AL549_RS15415 54ca67ad3da92f8c75f290705025e9fe 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 180 199 7.0E-5 T 28-03-2018 AL549_RS15415 54ca67ad3da92f8c75f290705025e9fe 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 200 220 7.0E-5 T 28-03-2018 AL549_RS15415 54ca67ad3da92f8c75f290705025e9fe 221 SUPERFAMILY SSF103088 105 220 1.44E-34 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS07665 666ecfcc08060552a4af8a0cdc151277 1512 Gene3D G3DSA:3.60.20.10 21 453 9.6E-154 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL549_RS07665 666ecfcc08060552a4af8a0cdc151277 1512 Gene3D G3DSA:3.20.20.70 454 800 1.2E-94 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS07665 666ecfcc08060552a4af8a0cdc151277 1512 Gene3D G3DSA:3.20.20.70 801 1240 1.5E-161 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS07665 666ecfcc08060552a4af8a0cdc151277 1512 Pfam PF01493 GXGXG motif 1267 1452 4.1E-84 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AL549_RS07665 666ecfcc08060552a4af8a0cdc151277 1512 Pfam PF00310 Glutamine amidotransferases class-II 21 443 1.3E-185 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain AL549_RS07665 666ecfcc08060552a4af8a0cdc151277 1512 SUPERFAMILY SSF56235 21 446 4.7E-151 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL549_RS07665 666ecfcc08060552a4af8a0cdc151277 1512 Pfam PF01645 Conserved region in glutamate synthase 817 1187 9.9E-152 T 28-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AL549_RS07665 666ecfcc08060552a4af8a0cdc151277 1512 Pfam PF04898 Glutamate synthase central domain 472 756 4.2E-116 T 28-03-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AL549_RS07665 666ecfcc08060552a4af8a0cdc151277 1512 Gene3D G3DSA:2.160.20.60 1242 1512 6.5E-109 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AL549_RS07665 666ecfcc08060552a4af8a0cdc151277 1512 SUPERFAMILY SSF51395 461 1220 1.69E-270 T 28-03-2018 AL549_RS07665 666ecfcc08060552a4af8a0cdc151277 1512 SUPERFAMILY SSF69336 1235 1498 2.75E-95 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AL549_RS12635 dc101647141a87488e9be0301aa82baf 202 Gene3D G3DSA:3.30.70.20 114 199 5.4E-15 T 28-03-2018 AL549_RS12635 dc101647141a87488e9be0301aa82baf 202 Gene3D G3DSA:3.30.70.20 72 113 1.9E-18 T 28-03-2018 AL549_RS12635 dc101647141a87488e9be0301aa82baf 202 Gene3D G3DSA:3.30.70.20 2 71 5.8E-11 T 28-03-2018 AL549_RS12635 dc101647141a87488e9be0301aa82baf 202 SUPERFAMILY SSF54862 1 183 2.72E-48 T 28-03-2018 AL549_RS12635 dc101647141a87488e9be0301aa82baf 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS12635 dc101647141a87488e9be0301aa82baf 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 9.8E-10 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS18165 1955e8d086b63ee0d096c3f92892f78c 283 SUPERFAMILY SSF81338 8 253 2.09E-74 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL549_RS18165 1955e8d086b63ee0d096c3f92892f78c 283 Pfam PF00230 Major intrinsic protein 5 251 2.7E-63 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL549_RS18165 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 86 105 6.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL549_RS18165 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 49 73 6.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL549_RS18165 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 234 254 6.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL549_RS18165 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 185 207 6.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL549_RS18165 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 10 29 6.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL549_RS18165 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 152 170 6.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL549_RS18165 1955e8d086b63ee0d096c3f92892f78c 283 ProSitePatterns PS00221 MIP family signature. 67 75 - T 28-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL549_RS18165 1955e8d086b63ee0d096c3f92892f78c 283 TIGRFAM TIGR00861 MIP: MIP family channel proteins 14 251 1.1E-68 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL549_RS18165 1955e8d086b63ee0d096c3f92892f78c 283 Gene3D G3DSA:1.20.1080.10 2 259 1.1E-78 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL549_RS12425 82745de200d16c7c649b6cb947cd56ea 707 Gene3D G3DSA:3.40.50.150 497 706 1.7E-42 T 28-03-2018 AL549_RS12425 82745de200d16c7c649b6cb947cd56ea 707 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 434 667 1.2E-26 T 28-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AL549_RS12425 82745de200d16c7c649b6cb947cd56ea 707 Pfam PF02926 THUMP domain 32 153 7.4E-12 T 28-03-2018 IPR004114 THUMP domain GO:0003723 AL549_RS12425 82745de200d16c7c649b6cb947cd56ea 707 Gene3D G3DSA:3.40.50.150 93 367 1.7E-32 T 28-03-2018 AL549_RS12425 82745de200d16c7c649b6cb947cd56ea 707 Gene3D G3DSA:3.30.750.80 396 496 2.3E-7 T 28-03-2018 AL549_RS12425 82745de200d16c7c649b6cb947cd56ea 707 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 1.4E-61 T 28-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS12425 82745de200d16c7c649b6cb947cd56ea 707 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 28-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS12425 82745de200d16c7c649b6cb947cd56ea 707 PIRSF PIRSF037618 1 707 2.5E-297 T 28-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS12425 82745de200d16c7c649b6cb947cd56ea 707 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.563 T 28-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS12425 82745de200d16c7c649b6cb947cd56ea 707 SUPERFAMILY SSF53335 258 371 3.54E-41 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS12425 82745de200d16c7c649b6cb947cd56ea 707 SUPERFAMILY SSF53335 139 217 3.54E-41 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS12425 82745de200d16c7c649b6cb947cd56ea 707 SMART SM00981 56 154 3.3E-20 T 28-03-2018 IPR004114 THUMP domain GO:0003723 AL549_RS12425 82745de200d16c7c649b6cb947cd56ea 707 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL549_RS12425 82745de200d16c7c649b6cb947cd56ea 707 SUPERFAMILY SSF53335 399 706 9.09E-71 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS07730 cf5fa6a009932b9a53602d9529847a13 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 41.06 T 28-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AL549_RS07730 cf5fa6a009932b9a53602d9529847a13 125 Pfam PF01228 Glycine radical 15 106 1.4E-22 T 28-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AL549_RS07730 cf5fa6a009932b9a53602d9529847a13 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL549_RS07730 cf5fa6a009932b9a53602d9529847a13 125 Gene3D G3DSA:3.20.70.20 26 125 7.5E-30 T 28-03-2018 AL549_RS07730 cf5fa6a009932b9a53602d9529847a13 125 PIRSF PIRSF000378 2 125 5.9E-54 T 28-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AL549_RS07730 cf5fa6a009932b9a53602d9529847a13 125 SUPERFAMILY SSF51998 65 124 1.1E-23 T 28-03-2018 AL549_RS07730 cf5fa6a009932b9a53602d9529847a13 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 7.8E-69 T 28-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AL549_RS15775 9fb89b6b3b8e07107876bb139895d9a0 437 Gene3D G3DSA:3.30.70.270 244 421 3.6E-55 T 28-03-2018 AL549_RS15775 9fb89b6b3b8e07107876bb139895d9a0 437 SMART SM00267 250 422 2.0E-56 T 28-03-2018 IPR000160 GGDEF domain AL549_RS15775 9fb89b6b3b8e07107876bb139895d9a0 437 SUPERFAMILY SSF55073 266 420 1.49E-46 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS15775 9fb89b6b3b8e07107876bb139895d9a0 437 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 415 6.0E-45 T 28-03-2018 IPR000160 GGDEF domain AL549_RS15775 9fb89b6b3b8e07107876bb139895d9a0 437 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 260 416 5.3E-44 T 28-03-2018 IPR000160 GGDEF domain AL549_RS10525 21bfe6825c3690d12b6b6a59a50abde8 959 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 35 467 3.8E-158 T 28-03-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855 AL549_RS10525 21bfe6825c3690d12b6b6a59a50abde8 959 Gene3D G3DSA:3.90.1150.10 343 478 8.2E-31 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS10525 21bfe6825c3690d12b6b6a59a50abde8 959 Gene3D G3DSA:3.90.1150.10 847 958 2.6E-19 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS10525 21bfe6825c3690d12b6b6a59a50abde8 959 SUPERFAMILY SSF53383 43 465 2.04E-113 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS10525 21bfe6825c3690d12b6b6a59a50abde8 959 Gene3D G3DSA:3.40.640.10 79 342 7.6E-67 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS10525 21bfe6825c3690d12b6b6a59a50abde8 959 Pfam PF00202 Aminotransferase class-III 52 465 4.2E-94 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL549_RS10525 21bfe6825c3690d12b6b6a59a50abde8 959 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 533 892 3.6E-63 T 28-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AL549_RS10525 21bfe6825c3690d12b6b6a59a50abde8 959 Gene3D G3DSA:3.40.640.10 571 846 2.6E-54 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS10525 21bfe6825c3690d12b6b6a59a50abde8 959 SUPERFAMILY SSF53383 513 957 1.35E-114 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS10525 21bfe6825c3690d12b6b6a59a50abde8 959 Gene3D G3DSA:1.20.1650.10 479 560 3.8E-33 T 28-03-2018 AL549_RS11740 d9f683f94825a0b02d9b1808c5992440 186 Pfam PF07209 Protein of unknown function (DUF1415) 10 178 6.2E-66 T 28-03-2018 IPR009858 Protein of unknown function DUF1415 AL549_RS18180 4e4199e29c75c0641910a812033e0cc0 513 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 17 34 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL549_RS18180 4e4199e29c75c0641910a812033e0cc0 513 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 389 494 5.2E-11 T 28-03-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL549_RS18180 4e4199e29c75c0641910a812033e0cc0 513 SUPERFAMILY SSF54373 234 327 3.14E-7 T 28-03-2018 AL549_RS18180 4e4199e29c75c0641910a812033e0cc0 513 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 360 370 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL549_RS18180 4e4199e29c75c0641910a812033e0cc0 513 Gene3D G3DSA:3.30.9.10 91 188 3.3E-19 T 28-03-2018 AL549_RS18180 4e4199e29c75c0641910a812033e0cc0 513 Gene3D G3DSA:3.30.9.10 189 328 2.8E-38 T 28-03-2018 AL549_RS18180 4e4199e29c75c0641910a812033e0cc0 513 Pfam PF01266 FAD dependent oxidoreductase 13 331 2.5E-51 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL549_RS18180 4e4199e29c75c0641910a812033e0cc0 513 Gene3D G3DSA:3.50.50.60 2 81 6.3E-4 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS18180 4e4199e29c75c0641910a812033e0cc0 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 321 327 2.7E-29 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL549_RS18180 4e4199e29c75c0641910a812033e0cc0 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 41 53 2.7E-29 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL549_RS18180 4e4199e29c75c0641910a812033e0cc0 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 355 367 2.7E-29 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL549_RS18180 4e4199e29c75c0641910a812033e0cc0 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 25 35 2.7E-29 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL549_RS18180 4e4199e29c75c0641910a812033e0cc0 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 12 24 2.7E-29 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL549_RS18180 4e4199e29c75c0641910a812033e0cc0 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 86 98 2.7E-29 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL549_RS18180 4e4199e29c75c0641910a812033e0cc0 513 SUPERFAMILY SSF51905 11 268 7.96E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS18180 4e4199e29c75c0641910a812033e0cc0 513 SUPERFAMILY SSF51905 320 330 7.96E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS19320 a2cdc27eb2ed546e5b725097b61d5336 287 Pfam PF05552 Conserved TM helix 21 69 1.0E-12 T 28-03-2018 IPR008910 Conserved TM helix AL549_RS19320 a2cdc27eb2ed546e5b725097b61d5336 287 SUPERFAMILY SSF82861 33 118 6.67E-18 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AL549_RS19320 a2cdc27eb2ed546e5b725097b61d5336 287 Gene3D G3DSA:2.30.30.60 135 184 3.2E-17 T 28-03-2018 AL549_RS19320 a2cdc27eb2ed546e5b725097b61d5336 287 SUPERFAMILY SSF50182 120 185 1.21E-17 T 28-03-2018 IPR010920 LSM domain AL549_RS19320 a2cdc27eb2ed546e5b725097b61d5336 287 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 28-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AL549_RS19320 a2cdc27eb2ed546e5b725097b61d5336 287 Gene3D G3DSA:3.30.70.100 185 279 4.5E-30 T 28-03-2018 AL549_RS19320 a2cdc27eb2ed546e5b725097b61d5336 287 Pfam PF00924 Mechanosensitive ion channel 77 274 2.0E-57 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL549_RS19320 a2cdc27eb2ed546e5b725097b61d5336 287 SUPERFAMILY SSF82689 187 284 1.7E-34 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AL549_RS04990 17f6be8d61092dc9262d516bd831302a 680 Gene3D G3DSA:3.30.300.30 553 678 4.8E-13 T 28-03-2018 AL549_RS04990 17f6be8d61092dc9262d516bd831302a 680 Gene3D G3DSA:3.40.50.980 114 304 1.1E-30 T 28-03-2018 AL549_RS04990 17f6be8d61092dc9262d516bd831302a 680 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 27 672 2.6E-241 T 28-03-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 AL549_RS04990 17f6be8d61092dc9262d516bd831302a 680 Pfam PF00501 AMP-binding enzyme 125 554 3.0E-48 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL549_RS04990 17f6be8d61092dc9262d516bd831302a 680 Gene3D G3DSA:3.40.50.980 305 464 4.2E-24 T 28-03-2018 AL549_RS04990 17f6be8d61092dc9262d516bd831302a 680 SUPERFAMILY SSF56801 55 672 5.23E-123 T 28-03-2018 AL549_RS04990 17f6be8d61092dc9262d516bd831302a 680 ProSitePatterns PS00455 Putative AMP-binding domain signature. 299 310 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL549_RS00305 efe7f975f530cf9970c974663d1ca8ab 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.441 T 28-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL549_RS00305 efe7f975f530cf9970c974663d1ca8ab 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 2.6E-111 T 28-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL549_RS00305 efe7f975f530cf9970c974663d1ca8ab 236 Gene3D G3DSA:3.40.50.1580 9 236 5.4E-55 T 28-03-2018 AL549_RS00305 efe7f975f530cf9970c974663d1ca8ab 236 Pfam PF01048 Phosphorylase superfamily 17 217 1.5E-34 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL549_RS00305 efe7f975f530cf9970c974663d1ca8ab 236 SUPERFAMILY SSF53167 3 234 2.88E-91 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL549_RS21845 f50477ca2a47fd6b4f70fa3c99c223dd 140 Gene3D G3DSA:2.60.15.10 2 91 3.7E-28 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21845 f50477ca2a47fd6b4f70fa3c99c223dd 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 4.0E-40 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21845 f50477ca2a47fd6b4f70fa3c99c223dd 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 2.0E-10 T 28-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21845 f50477ca2a47fd6b4f70fa3c99c223dd 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.511 T 28-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21845 f50477ca2a47fd6b4f70fa3c99c223dd 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 3.4E-28 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21845 f50477ca2a47fd6b4f70fa3c99c223dd 140 Gene3D G3DSA:1.20.5.440 92 132 1.7E-10 T 28-03-2018 AL549_RS21845 f50477ca2a47fd6b4f70fa3c99c223dd 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 1.6E-43 T 28-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21845 f50477ca2a47fd6b4f70fa3c99c223dd 140 SUPERFAMILY SSF51344 5 87 2.62E-24 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21845 f50477ca2a47fd6b4f70fa3c99c223dd 140 SUPERFAMILY SSF46604 89 138 2.28E-13 T 28-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS09160 150eded8e54afda423ab501251076559 235 Pfam PF13861 FlgD Tudor-like domain 93 229 3.9E-15 T 28-03-2018 IPR025963 FlgD Tudor-like domain AL549_RS09160 150eded8e54afda423ab501251076559 235 Pfam PF13860 FlgD Ig-like domain 117 184 5.1E-19 T 28-03-2018 IPR025965 FlgD Ig-like domain AL549_RS09160 150eded8e54afda423ab501251076559 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 85 2.7E-22 T 28-03-2018 IPR005648 Flagellar hook capping protein AL549_RS21860 4f8b2bb0bcf1fdbb96e8587384ff0772 258 Gene3D G3DSA:3.40.190.10 180 257 0.0014 T 28-03-2018 AL549_RS21860 4f8b2bb0bcf1fdbb96e8587384ff0772 258 SMART SM00062 33 257 2.7E-38 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS21860 4f8b2bb0bcf1fdbb96e8587384ff0772 258 SUPERFAMILY SSF53850 1 255 4.23E-50 T 28-03-2018 AL549_RS21860 4f8b2bb0bcf1fdbb96e8587384ff0772 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL549_RS21860 4f8b2bb0bcf1fdbb96e8587384ff0772 258 Gene3D G3DSA:3.40.190.10 22 179 1.5E-30 T 28-03-2018 AL549_RS21860 4f8b2bb0bcf1fdbb96e8587384ff0772 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 254 3.0E-37 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS16940 26cb5e756dfb885468defd4049d0c820 711 Gene3D G3DSA:3.90.1150.10 425 594 2.0E-55 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS16940 26cb5e756dfb885468defd4049d0c820 711 SUPERFAMILY SSF55904 568 708 1.44E-42 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AL549_RS16940 26cb5e756dfb885468defd4049d0c820 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 2.1E-29 T 28-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AL549_RS16940 26cb5e756dfb885468defd4049d0c820 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AL549_RS16940 26cb5e756dfb885468defd4049d0c820 711 Gene3D G3DSA:3.40.50.2300 15 129 0.002 T 28-03-2018 AL549_RS16940 26cb5e756dfb885468defd4049d0c820 711 Gene3D G3DSA:3.90.100.10 595 711 1.3E-35 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AL549_RS16940 26cb5e756dfb885468defd4049d0c820 711 SUPERFAMILY SSF53383 130 562 7.24E-106 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS16940 26cb5e756dfb885468defd4049d0c820 711 Gene3D G3DSA:3.40.640.10 130 424 2.8E-35 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS16940 26cb5e756dfb885468defd4049d0c820 711 PIRSF PIRSF009393 1 711 1.2E-287 T 28-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AL549_RS16940 26cb5e756dfb885468defd4049d0c820 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.6E-44 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AL549_RS16940 26cb5e756dfb885468defd4049d0c820 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.6E-186 T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AL549_RS19380 183e382c6e232900f2fbb0d4812a9fe3 317 Gene3D G3DSA:3.40.50.20 2 129 2.1E-53 T 28-03-2018 AL549_RS19380 183e382c6e232900f2fbb0d4812a9fe3 317 SUPERFAMILY SSF52440 2 122 6.91E-47 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL549_RS19380 183e382c6e232900f2fbb0d4812a9fe3 317 Gene3D G3DSA:3.30.1490.20 138 190 8.1E-21 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL549_RS19380 183e382c6e232900f2fbb0d4812a9fe3 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 8.6E-140 T 28-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL549_RS19380 183e382c6e232900f2fbb0d4812a9fe3 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 1.6E-48 T 28-03-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL549_RS19380 183e382c6e232900f2fbb0d4812a9fe3 317 SUPERFAMILY SSF56059 123 313 3.76E-58 T 28-03-2018 AL549_RS19380 183e382c6e232900f2fbb0d4812a9fe3 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 178.522 T 28-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL549_RS19380 183e382c6e232900f2fbb0d4812a9fe3 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 2.4E-79 T 28-03-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL549_RS19380 183e382c6e232900f2fbb0d4812a9fe3 317 Gene3D G3DSA:3.30.470.20 191 300 5.6E-17 T 28-03-2018 AL549_RS20765 84b9cdf592fcbfa96925ed0af64758bd 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 434 3.5E-180 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL549_RS20765 84b9cdf592fcbfa96925ed0af64758bd 435 PIRSF PIRSF004539 1 435 1.1E-177 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL549_RS20765 84b9cdf592fcbfa96925ed0af64758bd 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 2.6E-145 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL549_RS21360 4f0e388c83cf213a4bb61345e5cbc5b1 393 SUPERFAMILY SSF48452 252 392 2.21E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS21360 4f0e388c83cf213a4bb61345e5cbc5b1 393 SMART SM00028 327 360 0.0056 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS21360 4f0e388c83cf213a4bb61345e5cbc5b1 393 Pfam PF07219 HemY protein N-terminus 26 132 3.9E-26 T 28-03-2018 IPR010817 HemY, N-terminal AL549_RS21360 4f0e388c83cf213a4bb61345e5cbc5b1 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 6.9E-114 T 28-03-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 AL549_RS21360 4f0e388c83cf213a4bb61345e5cbc5b1 393 Gene3D G3DSA:1.25.40.10 310 393 1.6E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS21360 4f0e388c83cf213a4bb61345e5cbc5b1 393 Gene3D G3DSA:1.25.40.10 79 157 0.26 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS21360 4f0e388c83cf213a4bb61345e5cbc5b1 393 Gene3D G3DSA:1.25.40.10 158 309 2.2E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS21360 4f0e388c83cf213a4bb61345e5cbc5b1 393 SUPERFAMILY SSF48452 85 294 8.43E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS03005 f88567ad4db0bb766910ab4e9a48d7d9 546 Gene3D G3DSA:3.40.50.1820 22 496 2.0E-17 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS03005 f88567ad4db0bb766910ab4e9a48d7d9 546 Pfam PF07519 Tannase and feruloyl esterase 87 539 3.0E-85 T 28-03-2018 IPR011118 Tannase/feruloyl esterase MetaCyc: PWY-6784 AL549_RS03005 f88567ad4db0bb766910ab4e9a48d7d9 546 SUPERFAMILY SSF53474 74 223 1.13E-12 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS03005 f88567ad4db0bb766910ab4e9a48d7d9 546 SUPERFAMILY SSF53474 415 481 1.13E-12 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS18610 864958f0cd5c79704bf9cd42d1561882 653 Pfam PF06480 FtsH Extracellular 8 96 4.5E-12 T 28-03-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 AL549_RS18610 864958f0cd5c79704bf9cd42d1561882 653 SUPERFAMILY SSF52540 147 395 1.2E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18610 864958f0cd5c79704bf9cd42d1561882 653 Gene3D G3DSA:3.40.50.300 132 335 4.2E-62 T 28-03-2018 AL549_RS18610 864958f0cd5c79704bf9cd42d1561882 653 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 6.7E-46 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL549_RS18610 864958f0cd5c79704bf9cd42d1561882 653 SUPERFAMILY SSF140990 406 601 4.97E-75 T 28-03-2018 AL549_RS18610 864958f0cd5c79704bf9cd42d1561882 653 SMART SM00382 188 327 3.6E-26 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS18610 864958f0cd5c79704bf9cd42d1561882 653 Pfam PF01434 Peptidase family M41 386 595 4.3E-81 T 28-03-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AL549_RS18610 864958f0cd5c79704bf9cd42d1561882 653 Gene3D G3DSA:1.10.8.60 336 415 1.4E-23 T 28-03-2018 AL549_RS18610 864958f0cd5c79704bf9cd42d1561882 653 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 597 1.0E-241 T 28-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AL549_RS18610 864958f0cd5c79704bf9cd42d1561882 653 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 28-03-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AL549_RS18610 864958f0cd5c79704bf9cd42d1561882 653 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 628 37.213 T 28-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AL549_RS12785 7b4bd627deba48b7f4689091826108fa 206 SUPERFAMILY SSF63380 1 93 1.7E-26 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL549_RS12785 7b4bd627deba48b7f4689091826108fa 206 PIRSF PIRSF000498 1 204 1.7E-67 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS12785 7b4bd627deba48b7f4689091826108fa 206 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 200 4.0E-77 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS12785 7b4bd627deba48b7f4689091826108fa 206 Gene3D G3DSA:2.40.30.20 94 192 2.2E-25 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS12785 7b4bd627deba48b7f4689091826108fa 206 Pfam PF00677 Lumazine binding domain 3 87 1.3E-20 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS12785 7b4bd627deba48b7f4689091826108fa 206 Pfam PF00677 Lumazine binding domain 100 185 3.9E-21 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS12785 7b4bd627deba48b7f4689091826108fa 206 SUPERFAMILY SSF63380 93 198 5.87E-30 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL549_RS12785 7b4bd627deba48b7f4689091826108fa 206 Gene3D G3DSA:2.40.30.20 1 93 3.8E-27 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21725 66a918d4e7d98b88101795b9755d4524 366 SUPERFAMILY SSF55979 126 244 9.42E-28 T 28-03-2018 AL549_RS21725 66a918d4e7d98b88101795b9755d4524 366 Gene3D G3DSA:3.10.150.10 248 366 3.0E-27 T 28-03-2018 AL549_RS21725 66a918d4e7d98b88101795b9755d4524 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.1E-108 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS21725 66a918d4e7d98b88101795b9755d4524 366 Gene3D G3DSA:3.10.150.10 1 123 1.3E-28 T 28-03-2018 AL549_RS21725 66a918d4e7d98b88101795b9755d4524 366 PIRSF PIRSF000804 1 366 5.6E-118 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS21725 66a918d4e7d98b88101795b9755d4524 366 Gene3D G3DSA:3.10.150.10 124 247 1.2E-33 T 28-03-2018 AL549_RS21725 66a918d4e7d98b88101795b9755d4524 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 4.2E-38 T 28-03-2018 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS21725 66a918d4e7d98b88101795b9755d4524 366 SUPERFAMILY SSF55979 245 366 8.37E-36 T 28-03-2018 AL549_RS21725 66a918d4e7d98b88101795b9755d4524 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 4.7E-35 T 28-03-2018 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS21725 66a918d4e7d98b88101795b9755d4524 366 SUPERFAMILY SSF55979 1 118 1.48E-29 T 28-03-2018 AL549_RS21725 66a918d4e7d98b88101795b9755d4524 366 SMART SM00480 17 362 8.2E-146 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS21725 66a918d4e7d98b88101795b9755d4524 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.7E-38 T 28-03-2018 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS03335 d5b5a153fb28c471487bb580b7e44c4b 115 SMART SM00418 5 84 1.4E-23 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS03335 d5b5a153fb28c471487bb580b7e44c4b 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 2.8E-20 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS03335 d5b5a153fb28c471487bb580b7e44c4b 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 2.8E-20 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS03335 d5b5a153fb28c471487bb580b7e44c4b 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 2.8E-20 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS03335 d5b5a153fb28c471487bb580b7e44c4b 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 2.8E-20 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS03335 d5b5a153fb28c471487bb580b7e44c4b 115 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 30 48 - T 28-03-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 AL549_RS03335 d5b5a153fb28c471487bb580b7e44c4b 115 Pfam PF01022 Bacterial regulatory protein, arsR family 14 58 4.4E-15 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS03335 d5b5a153fb28c471487bb580b7e44c4b 115 Gene3D G3DSA:1.10.10.10 5 93 1.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03335 d5b5a153fb28c471487bb580b7e44c4b 115 SUPERFAMILY SSF46785 7 84 2.87E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS04140 e7f7aec9d296d05b24c2aa7d32192fde 829 Gene3D G3DSA:3.40.50.740 101 268 2.3E-35 T 28-03-2018 AL549_RS04140 e7f7aec9d296d05b24c2aa7d32192fde 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 28-03-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 AL549_RS04140 e7f7aec9d296d05b24c2aa7d32192fde 829 SUPERFAMILY SSF53706 38 698 1.57E-199 T 28-03-2018 AL549_RS04140 e7f7aec9d296d05b24c2aa7d32192fde 829 Gene3D G3DSA:2.40.40.20 669 828 1.5E-36 T 28-03-2018 AL549_RS04140 e7f7aec9d296d05b24c2aa7d32192fde 829 SMART SM00926 41 95 1.9E-13 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS04140 e7f7aec9d296d05b24c2aa7d32192fde 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 8.8E-28 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL549_RS04140 e7f7aec9d296d05b24c2aa7d32192fde 829 Gene3D G3DSA:2.20.25.90 34 100 6.6E-14 T 28-03-2018 AL549_RS04140 e7f7aec9d296d05b24c2aa7d32192fde 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 3.6E-88 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS04140 e7f7aec9d296d05b24c2aa7d32192fde 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AL549_RS04140 e7f7aec9d296d05b24c2aa7d32192fde 829 Hamap MF_01630 Nitrate reductase [napA]. 1 828 29.02 T 28-03-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 AL549_RS04140 e7f7aec9d296d05b24c2aa7d32192fde 829 SUPERFAMILY SSF50692 688 828 5.18E-44 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AL549_RS04140 e7f7aec9d296d05b24c2aa7d32192fde 829 Gene3D G3DSA:3.40.50.740 306 668 5.0E-62 T 28-03-2018 AL549_RS04140 e7f7aec9d296d05b24c2aa7d32192fde 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 1.9E-16 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS20855 756b8622d49308e8771e6e5d8c3f9908 322 Pfam PF01207 Dihydrouridine synthase (Dus) 13 314 4.3E-112 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL549_RS20855 756b8622d49308e8771e6e5d8c3f9908 322 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 50.219 T 28-03-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 AL549_RS20855 756b8622d49308e8771e6e5d8c3f9908 322 PIRSF PIRSF006621 1 321 2.7E-102 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL549_RS20855 756b8622d49308e8771e6e5d8c3f9908 322 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 3.3E-134 T 28-03-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AL549_RS20855 756b8622d49308e8771e6e5d8c3f9908 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL549_RS20855 756b8622d49308e8771e6e5d8c3f9908 322 Gene3D G3DSA:1.10.1200.80 252 322 2.6E-20 T 28-03-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AL549_RS20855 756b8622d49308e8771e6e5d8c3f9908 322 Gene3D G3DSA:3.20.20.70 8 240 8.3E-58 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS20855 756b8622d49308e8771e6e5d8c3f9908 322 SUPERFAMILY SSF51395 10 319 1.03E-90 T 28-03-2018 AL549_RS06305 99ccda19d8ded5c2bd716b55380c818f 664 SUPERFAMILY SSF50249 568 649 1.14E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS06305 99ccda19d8ded5c2bd716b55380c818f 664 SMART SM00955 193 523 1.2E-115 T 28-03-2018 AL549_RS06305 99ccda19d8ded5c2bd716b55380c818f 664 ProSitePatterns PS01175 Ribonuclease II family signature. 490 514 - T 28-03-2018 IPR022966 Ribonuclease II/R, conserved site AL549_RS06305 99ccda19d8ded5c2bd716b55380c818f 664 SUPERFAMILY SSF50249 8 80 1.86E-14 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS06305 99ccda19d8ded5c2bd716b55380c818f 664 Pfam PF00773 RNB domain 193 521 2.0E-87 T 28-03-2018 AL549_RS06305 99ccda19d8ded5c2bd716b55380c818f 664 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 649 0.0 T 28-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 AL549_RS06305 99ccda19d8ded5c2bd716b55380c818f 664 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 650 43.085 T 28-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 AL549_RS06305 99ccda19d8ded5c2bd716b55380c818f 664 SMART SM00357 23 79 3.8E-9 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AL549_RS06305 99ccda19d8ded5c2bd716b55380c818f 664 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 648 1.4E-184 T 28-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AL549_RS06305 99ccda19d8ded5c2bd716b55380c818f 664 SUPERFAMILY SSF50249 186 563 2.31E-108 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS06305 99ccda19d8ded5c2bd716b55380c818f 664 Pfam PF00575 S1 RNA binding domain 566 645 6.7E-9 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL549_RS06305 99ccda19d8ded5c2bd716b55380c818f 664 Gene3D G3DSA:2.40.50.140 566 651 3.5E-6 T 28-03-2018 AL549_RS06305 99ccda19d8ded5c2bd716b55380c818f 664 SMART SM00316 566 650 1.6E-4 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL549_RS06305 99ccda19d8ded5c2bd716b55380c818f 664 Pfam PF08206 Ribonuclease B OB domain 24 80 1.0E-17 T 28-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain AL549_RS06305 99ccda19d8ded5c2bd716b55380c818f 664 SUPERFAMILY SSF50249 83 173 6.74E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 5.4E-25 T 28-03-2018 IPR003711 CarD-like/TRCF domain AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 5.1E-21 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 SUPERFAMILY SSF52540 352 466 1.33E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 SUPERFAMILY SSF52540 782 990 5.59E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 SUPERFAMILY SSF143517 998 1146 7.85E-43 T 28-03-2018 AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 SMART SM00487 600 790 2.5E-34 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 Pfam PF00271 Helicase conserved C-terminal domain 806 909 4.7E-16 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 SMART SM00982 1008 1108 6.1E-47 T 28-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 Gene3D G3DSA:3.40.50.300 789 956 5.8E-25 T 28-03-2018 AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 SUPERFAMILY SSF52540 523 783 3.46E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 Gene3D G3DSA:3.30.2060.10 132 198 0.0039 T 28-03-2018 AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 Gene3D G3DSA:3.40.50.300 306 788 2.3E-41 T 28-03-2018 AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 SUPERFAMILY SSF52540 11 340 1.31E-99 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1081 0.0 T 28-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 Pfam PF03461 TRCF domain 1010 1101 3.3E-28 T 28-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 SMART SM00490 826 910 5.3E-19 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 28 1141 28.878 T 28-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 SUPERFAMILY SSF141259 470 548 4.58E-24 T 28-03-2018 IPR003711 CarD-like/TRCF domain AL549_RS16860 72f9217acfd61efb55d0724c6151f76d 1153 SMART SM01058 479 576 1.6E-50 T 28-03-2018 IPR003711 CarD-like/TRCF domain AL549_RS15380 33b2d47c6861ea89ccf8e34dbead25f8 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.432 T 28-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL549_RS15380 33b2d47c6861ea89ccf8e34dbead25f8 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 28-03-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AL549_RS15380 33b2d47c6861ea89ccf8e34dbead25f8 511 SUPERFAMILY SSF48557 5 506 1.96E-192 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL549_RS15380 33b2d47c6861ea89ccf8e34dbead25f8 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 503 6.4E-216 T 28-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL549_RS15380 33b2d47c6861ea89ccf8e34dbead25f8 511 Gene3D G3DSA:1.20.200.10 199 506 3.7E-122 T 28-03-2018 AL549_RS15380 33b2d47c6861ea89ccf8e34dbead25f8 511 Gene3D G3DSA:1.10.275.10 2 197 2.3E-72 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AL549_RS15380 33b2d47c6861ea89ccf8e34dbead25f8 511 Pfam PF00221 Aromatic amino acid lyase 11 471 1.1E-187 T 28-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AL549_RS08340 ff7754d6c073c281cb6359c4484eb1c9 563 Gene3D G3DSA:2.10.10.20 518 559 0.011 T 28-03-2018 AL549_RS08340 ff7754d6c073c281cb6359c4484eb1c9 563 SUPERFAMILY SSF53955 88 349 4.5E-52 T 28-03-2018 IPR023346 Lysozyme-like domain AL549_RS08340 ff7754d6c073c281cb6359c4484eb1c9 563 Gene3D G3DSA:2.10.10.20 432 475 1.5E-16 T 28-03-2018 AL549_RS08340 ff7754d6c073c281cb6359c4484eb1c9 563 SUPERFAMILY SSF51055 434 475 1.02E-14 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS08340 ff7754d6c073c281cb6359c4484eb1c9 563 SMART SM00495 515 560 1.4 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS08340 ff7754d6c073c281cb6359c4484eb1c9 563 SMART SM00495 433 475 4.9E-16 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS08340 ff7754d6c073c281cb6359c4484eb1c9 563 Gene3D G3DSA:1.10.530.10 84 342 1.8E-53 T 28-03-2018 AL549_RS08340 ff7754d6c073c281cb6359c4484eb1c9 563 Pfam PF00182 Chitinase class I 105 325 2.0E-30 T 28-03-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL549_RS08340 ff7754d6c073c281cb6359c4484eb1c9 563 Pfam PF02839 Carbohydrate binding domain 450 472 4.8E-5 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS16205 789d3a444798755359247db875a785dd 644 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 38 141 1.4E-8 T 28-03-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 AL549_RS16205 789d3a444798755359247db875a785dd 644 Gene3D G3DSA:2.60.40.1180 558 644 2.4E-15 T 28-03-2018 AL549_RS16205 789d3a444798755359247db875a785dd 644 SMART SM00642 158 554 2.0E-91 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS16205 789d3a444798755359247db875a785dd 644 SUPERFAMILY SSF81296 33 141 3.27E-25 T 28-03-2018 IPR014756 Immunoglobulin E-set AL549_RS16205 789d3a444798755359247db875a785dd 644 Gene3D G3DSA:2.60.40.10 33 146 3.0E-18 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS16205 789d3a444798755359247db875a785dd 644 SUPERFAMILY SSF51445 146 563 1.02E-101 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS16205 789d3a444798755359247db875a785dd 644 PIRSF PIRSF036918 33 644 1.2E-271 T 28-03-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 AL549_RS16205 789d3a444798755359247db875a785dd 644 Gene3D G3DSA:3.20.20.80 147 556 2.0E-97 T 28-03-2018 AL549_RS16205 789d3a444798755359247db875a785dd 644 SUPERFAMILY SSF51011 563 643 9.26E-11 T 28-03-2018 AL549_RS16205 789d3a444798755359247db875a785dd 644 Pfam PF00128 Alpha amylase, catalytic domain 210 527 2.2E-80 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 28-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 337 454 7.4E-17 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 231 1.1E-7 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.7E-24 T 28-03-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 28-03-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 Gene3D G3DSA:3.90.1100.10 19 239 1.1E-50 T 28-03-2018 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 Gene3D G3DSA:3.90.1100.10 648 713 2.2E-14 T 28-03-2018 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 Gene3D G3DSA:3.90.1100.10 249 647 8.4E-79 T 28-03-2018 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 1.6E-156 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.8E-27 T 28-03-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 28-03-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 Gene3D G3DSA:2.40.50.150 814 949 6.0E-30 T 28-03-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 Gene3D G3DSA:2.40.270.10 1023 1241 1.4E-77 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 SUPERFAMILY SSF64484 343 939 0.0 T 28-03-2018 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 SUPERFAMILY SSF64484 11 226 0.0 T 28-03-2018 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 28-03-2018 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 Gene3D G3DSA:2.40.50.100 715 795 3.0E-26 T 28-03-2018 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 Gene3D G3DSA:3.90.1800.10 1266 1308 7.6E-12 T 28-03-2018 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.1E-57 T 28-03-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20950 3d60ad867c1d084cf046b6c07cf9f823 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.293 T 28-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS06110 e38cd01601d561d515b027166f3d060e 364 Gene3D G3DSA:2.40.10.10 138 288 2.3E-29 T 28-03-2018 AL549_RS06110 e38cd01601d561d515b027166f3d060e 364 Pfam PF00089 Trypsin 57 280 2.8E-33 T 28-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL549_RS06110 e38cd01601d561d515b027166f3d060e 364 Gene3D G3DSA:2.40.10.10 30 70 1.2E-8 T 28-03-2018 AL549_RS06110 e38cd01601d561d515b027166f3d060e 364 SMART SM00020 29 280 6.0E-32 T 28-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL549_RS06110 e38cd01601d561d515b027166f3d060e 364 Gene3D G3DSA:2.40.10.10 71 137 6.4E-13 T 28-03-2018 AL549_RS06110 e38cd01601d561d515b027166f3d060e 364 SUPERFAMILY SSF50494 14 287 2.16E-52 T 28-03-2018 IPR009003 Peptidase S1, PA clan AL549_RS06110 e38cd01601d561d515b027166f3d060e 364 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 65 80 1.8E-11 T 28-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL549_RS06110 e38cd01601d561d515b027166f3d060e 364 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 227 239 1.8E-11 T 28-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL549_RS06110 e38cd01601d561d515b027166f3d060e 364 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 129 143 1.8E-11 T 28-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL549_RS06110 e38cd01601d561d515b027166f3d060e 364 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 228 239 - T 28-03-2018 IPR033116 Serine proteases, trypsin family, serine active site AL549_RS06110 e38cd01601d561d515b027166f3d060e 364 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 75 80 - T 28-03-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AL549_RS10460 276f379ed29e6789512d69b5e3f815f9 320 SUPERFAMILY SSF55120 68 235 2.26E-42 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS10460 276f379ed29e6789512d69b5e3f815f9 320 Pfam PF00849 RNA pseudouridylate synthase 68 200 4.9E-17 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS10460 276f379ed29e6789512d69b5e3f815f9 320 SUPERFAMILY SSF55174 4 96 8.92E-12 T 28-03-2018 AL549_RS10460 276f379ed29e6789512d69b5e3f815f9 320 Pfam PF01479 S4 domain 4 44 1.7E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS10460 276f379ed29e6789512d69b5e3f815f9 320 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 2.7E-54 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL549_RS10460 276f379ed29e6789512d69b5e3f815f9 320 Gene3D G3DSA:3.30.70.580 62 148 6.3E-19 T 28-03-2018 AL549_RS10460 276f379ed29e6789512d69b5e3f815f9 320 Gene3D G3DSA:3.30.70.1560 149 218 9.0E-18 T 28-03-2018 AL549_RS10460 276f379ed29e6789512d69b5e3f815f9 320 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL549_RS10460 276f379ed29e6789512d69b5e3f815f9 320 Gene3D G3DSA:3.10.290.10 1 60 2.6E-13 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS10460 276f379ed29e6789512d69b5e3f815f9 320 SMART SM00363 3 73 5.8E-9 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS09205 9c269bcc4881d0014e9ebd6fd668f785 385 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.4E-42 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL549_RS09205 9c269bcc4881d0014e9ebd6fd668f785 385 SUPERFAMILY SSF64518 1 384 9.81E-97 T 28-03-2018 AL549_RS09205 9c269bcc4881d0014e9ebd6fd668f785 385 PRINTS PR00207 Flagellin signature 76 95 1.0E-24 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL549_RS09205 9c269bcc4881d0014e9ebd6fd668f785 385 PRINTS PR00207 Flagellin signature 37 54 1.0E-24 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL549_RS09205 9c269bcc4881d0014e9ebd6fd668f785 385 PRINTS PR00207 Flagellin signature 111 134 1.0E-24 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL549_RS09205 9c269bcc4881d0014e9ebd6fd668f785 385 Pfam PF00700 Bacterial flagellin C-terminal helical region 298 383 1.6E-26 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL549_RS09205 9c269bcc4881d0014e9ebd6fd668f785 385 Gene3D G3DSA:1.20.1330.10 40 356 2.8E-69 T 28-03-2018 AL549_RS09205 9c269bcc4881d0014e9ebd6fd668f785 385 Pfam PF07196 Flagellin hook IN motif 209 252 2.0E-8 T 28-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL549_RS20265 64397f510c23b01e22dadb72f321b8af 256 Pfam PF00121 Triosephosphate isomerase 5 247 1.8E-87 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS20265 64397f510c23b01e22dadb72f321b8af 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 251 39.689 T 28-03-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS20265 64397f510c23b01e22dadb72f321b8af 256 SUPERFAMILY SSF51351 2 250 3.67E-89 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS20265 64397f510c23b01e22dadb72f321b8af 256 Gene3D G3DSA:3.20.20.70 1 256 3.3E-96 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS20265 64397f510c23b01e22dadb72f321b8af 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 6.9E-79 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS20265 64397f510c23b01e22dadb72f321b8af 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 28-03-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS17990 cc106d8cc7fd0410dab821c986d3b2f2 416 SMART SM00448 15 127 3.7E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS17990 cc106d8cc7fd0410dab821c986d3b2f2 416 SMART SM00448 136 250 2.7E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS17990 cc106d8cc7fd0410dab821c986d3b2f2 416 SUPERFAMILY SSF52172 16 135 7.97E-21 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS17990 cc106d8cc7fd0410dab821c986d3b2f2 416 Gene3D G3DSA:3.30.70.270 262 416 2.2E-40 T 28-03-2018 AL549_RS17990 cc106d8cc7fd0410dab821c986d3b2f2 416 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 265 414 5.9E-38 T 28-03-2018 IPR000160 GGDEF domain AL549_RS17990 cc106d8cc7fd0410dab821c986d3b2f2 416 SMART SM00267 256 416 1.2E-41 T 28-03-2018 IPR000160 GGDEF domain AL549_RS17990 cc106d8cc7fd0410dab821c986d3b2f2 416 Pfam PF00990 Diguanylate cyclase, GGDEF domain 267 412 6.2E-33 T 28-03-2018 IPR000160 GGDEF domain AL549_RS17990 cc106d8cc7fd0410dab821c986d3b2f2 416 SUPERFAMILY SSF52172 136 273 1.21E-31 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS17990 cc106d8cc7fd0410dab821c986d3b2f2 416 Gene3D G3DSA:3.40.50.2300 133 261 1.5E-29 T 28-03-2018 AL549_RS17990 cc106d8cc7fd0410dab821c986d3b2f2 416 SUPERFAMILY SSF55073 272 414 4.39E-35 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS17990 cc106d8cc7fd0410dab821c986d3b2f2 416 Pfam PF00072 Response regulator receiver domain 139 247 9.7E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS17990 cc106d8cc7fd0410dab821c986d3b2f2 416 Pfam PF00072 Response regulator receiver domain 17 116 8.0E-12 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS17990 cc106d8cc7fd0410dab821c986d3b2f2 416 Gene3D G3DSA:3.40.50.2300 10 132 9.5E-20 T 28-03-2018 AL549_RS23535 45f781eccdee883797fb1cef047712df 310 PIRSF PIRSF000102 1 305 2.5E-62 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AL549_RS23535 45f781eccdee883797fb1cef047712df 310 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 9.8E-130 T 28-03-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 AL549_RS23535 45f781eccdee883797fb1cef047712df 310 Gene3D G3DSA:3.40.50.720 2 147 3.3E-41 T 28-03-2018 AL549_RS23535 45f781eccdee883797fb1cef047712df 310 SUPERFAMILY SSF56327 146 309 2.16E-41 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL549_RS23535 45f781eccdee883797fb1cef047712df 310 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 28-03-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AL549_RS23535 45f781eccdee883797fb1cef047712df 310 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 308 1.1E-47 T 28-03-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AL549_RS23535 45f781eccdee883797fb1cef047712df 310 Gene3D G3DSA:3.90.110.10 148 310 3.0E-44 T 28-03-2018 AL549_RS23535 45f781eccdee883797fb1cef047712df 310 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 310 57.735 T 28-03-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AL549_RS23535 45f781eccdee883797fb1cef047712df 310 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 2.5E-47 T 28-03-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AL549_RS23535 45f781eccdee883797fb1cef047712df 310 SUPERFAMILY SSF51735 1 145 1.4E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS12955 6387735c154ceccdfbbc136c348c6a60 47 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 6.4E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS03785 d1421c7577553f0940eacb9aee5ec5fb 219 Gene3D G3DSA:3.40.50.10420 35 217 3.4E-38 T 28-03-2018 AL549_RS03785 d1421c7577553f0940eacb9aee5ec5fb 219 Pfam PF02589 LUD domain 43 216 3.3E-30 T 28-03-2018 IPR003741 LUD domain AL549_RS03785 d1421c7577553f0940eacb9aee5ec5fb 219 SUPERFAMILY SSF100950 36 216 3.14E-42 T 28-03-2018 AL549_RS03085 ae83cd530f8d4b3324ca1b9ed5d3c175 480 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 380 463 1.2E-16 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL549_RS03085 ae83cd530f8d4b3324ca1b9ed5d3c175 480 SUPERFAMILY SSF55604 404 476 1.11E-19 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL549_RS03085 ae83cd530f8d4b3324ca1b9ed5d3c175 480 Gene3D G3DSA:3.30.1360.60 402 477 7.5E-24 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL549_RS03085 ae83cd530f8d4b3324ca1b9ed5d3c175 480 Pfam PF00367 phosphotransferase system, EIIB 407 439 3.8E-14 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL549_RS03085 ae83cd530f8d4b3324ca1b9ed5d3c175 480 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 4 478 1.8E-227 T 28-03-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 AL549_RS03085 ae83cd530f8d4b3324ca1b9ed5d3c175 480 Pfam PF02378 Phosphotransferase system, EIIC 14 322 6.8E-81 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL549_RS03085 ae83cd530f8d4b3324ca1b9ed5d3c175 480 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 417 434 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL549_RS11295 2cc356c2313eaa33ba0b0a90f701d18e 538 Gene3D G3DSA:3.40.190.10 207 302 2.4E-20 T 28-03-2018 AL549_RS11295 2cc356c2313eaa33ba0b0a90f701d18e 538 SUPERFAMILY SSF53850 35 534 5.79E-128 T 28-03-2018 AL549_RS11295 2cc356c2313eaa33ba0b0a90f701d18e 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 454 7.5E-81 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL549_RS11295 2cc356c2313eaa33ba0b0a90f701d18e 538 Gene3D G3DSA:3.90.76.10 43 206 2.1E-30 T 28-03-2018 AL549_RS11295 2cc356c2313eaa33ba0b0a90f701d18e 538 PIRSF PIRSF002741 2 537 3.7E-87 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL549_RS11295 2cc356c2313eaa33ba0b0a90f701d18e 538 Gene3D G3DSA:3.10.105.10 303 509 1.6E-52 T 28-03-2018 AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 Gene3D G3DSA:3.30.230.10 3 207 3.0E-57 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 PRINTS PR00959 Mevalonate kinase family signature 26 50 4.3E-44 T 28-03-2018 AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 PRINTS PR00959 Mevalonate kinase family signature 120 142 4.3E-44 T 28-03-2018 AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 PRINTS PR00959 Mevalonate kinase family signature 329 346 4.3E-44 T 28-03-2018 AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 PRINTS PR00959 Mevalonate kinase family signature 163 182 4.3E-44 T 28-03-2018 AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 28-03-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 SUPERFAMILY SSF54211 2 204 4.33E-65 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 1.4E-148 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 Pfam PF00288 GHMP kinases N terminal domain 115 181 7.9E-11 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 28-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 PRINTS PR00473 Galactokinase signature 93 104 9.4E-30 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 PRINTS PR00473 Galactokinase signature 264 278 9.4E-30 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 PRINTS PR00473 Galactokinase signature 113 131 9.4E-30 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 PRINTS PR00473 Galactokinase signature 28 46 9.4E-30 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 Gene3D G3DSA:3.30.70.890 208 382 2.7E-58 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 PIRSF PIRSF000530 1 385 1.8E-128 T 28-03-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 Pfam PF10509 Galactokinase galactose-binding signature 11 59 6.8E-22 T 28-03-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 Hamap MF_00246 Galactokinase [galK]. 26 382 44.126 T 28-03-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 Pfam PF08544 GHMP kinases C terminal 280 361 7.5E-11 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AL549_RS18235 bf135dee771a7e253c5c3ad836ed13a3 386 SUPERFAMILY SSF55060 206 382 2.88E-53 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AL549_RS15805 b1ff285c3adb2c4b452383c174081141 401 SUPERFAMILY SSF53756 1 399 8.24E-72 T 28-03-2018 AL549_RS15805 b1ff285c3adb2c4b452383c174081141 401 Gene3D G3DSA:3.40.50.2000 1 210 7.7E-14 T 28-03-2018 AL549_RS15805 b1ff285c3adb2c4b452383c174081141 401 Pfam PF00534 Glycosyl transferases group 1 228 377 8.7E-28 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL549_RS15805 b1ff285c3adb2c4b452383c174081141 401 Pfam PF13439 Glycosyltransferase Family 4 14 219 4.1E-15 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL549_RS15805 b1ff285c3adb2c4b452383c174081141 401 Gene3D G3DSA:3.40.50.2000 211 383 6.6E-37 T 28-03-2018 AL549_RS17740 7bf475537088f7c653d2b85133ad81ca 284 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 67 271 2.1E-8 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS17740 7bf475537088f7c653d2b85133ad81ca 284 Gene3D G3DSA:3.60.10.10 47 279 9.9E-17 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS17740 7bf475537088f7c653d2b85133ad81ca 284 SUPERFAMILY SSF56219 60 279 2.22E-23 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS17740 7bf475537088f7c653d2b85133ad81ca 284 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 279 59.581 T 28-03-2018 IPR022958 Uncharacterised protein family UPF0294 AL549_RS05365 009d73c8c9e866ebfa1f9583728c45f2 338 Gene3D G3DSA:3.30.70.270 160 330 8.9E-53 T 28-03-2018 AL549_RS05365 009d73c8c9e866ebfa1f9583728c45f2 338 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 163 327 5.7E-53 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05365 009d73c8c9e866ebfa1f9583728c45f2 338 Pfam PF00990 Diguanylate cyclase, GGDEF domain 165 325 1.5E-50 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05365 009d73c8c9e866ebfa1f9583728c45f2 338 SUPERFAMILY SSF52172 3 144 5.69E-34 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS05365 009d73c8c9e866ebfa1f9583728c45f2 338 SMART SM00267 153 329 5.3E-64 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05365 009d73c8c9e866ebfa1f9583728c45f2 338 SUPERFAMILY SSF55073 169 327 1.41E-48 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS05365 009d73c8c9e866ebfa1f9583728c45f2 338 Gene3D G3DSA:3.40.50.2300 1 159 5.2E-34 T 28-03-2018 AL549_RS05365 009d73c8c9e866ebfa1f9583728c45f2 338 SMART SM00448 5 119 8.4E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS05365 009d73c8c9e866ebfa1f9583728c45f2 338 Pfam PF00072 Response regulator receiver domain 8 112 7.4E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS22215 7015cb51e6989e5b4a6cad7f806cab8c 617 Gene3D G3DSA:1.20.5.570 589 616 1.1E-14 T 28-03-2018 AL549_RS22215 7015cb51e6989e5b4a6cad7f806cab8c 617 Gene3D G3DSA:3.40.1670.10 323 465 3.9E-43 T 28-03-2018 AL549_RS22215 7015cb51e6989e5b4a6cad7f806cab8c 617 Gene3D G3DSA:3.40.1670.10 477 588 2.2E-25 T 28-03-2018 AL549_RS22215 7015cb51e6989e5b4a6cad7f806cab8c 617 SUPERFAMILY SSF143968 480 615 8.76E-32 T 28-03-2018 AL549_RS22215 7015cb51e6989e5b4a6cad7f806cab8c 617 SUPERFAMILY SSF50475 3 322 1.61E-122 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL549_RS22215 7015cb51e6989e5b4a6cad7f806cab8c 617 SUPERFAMILY SSF143968 323 459 9.68E-51 T 28-03-2018 AL549_RS22215 7015cb51e6989e5b4a6cad7f806cab8c 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 480 568 8.5E-18 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AL549_RS22215 7015cb51e6989e5b4a6cad7f806cab8c 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 430 1.0E-159 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AL549_RS22215 7015cb51e6989e5b4a6cad7f806cab8c 617 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 6.7E-162 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AL549_RS16030 d7837a4701cdca5bee46a314eaf12afe 185 SUPERFAMILY SSF111126 1 177 4.03E-50 T 28-03-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain AL549_RS16030 d7837a4701cdca5bee46a314eaf12afe 185 Pfam PF07700 Haem-NO-binding 2 162 1.4E-38 T 28-03-2018 IPR011644 Heme-NO binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 AL549_RS16030 d7837a4701cdca5bee46a314eaf12afe 185 Gene3D G3DSA:3.90.1520.10 1 184 1.9E-40 T 28-03-2018 AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 Gene3D G3DSA:3.30.450.20 24 162 9.4E-10 T 28-03-2018 AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 Gene3D G3DSA:3.30.450.20 287 422 1.7E-7 T 28-03-2018 AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 527 556 1.6E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 604 631 1.6E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 681 710 1.6E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 633 662 1.6E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 SMART SM00283 506 753 1.9E-97 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 Pfam PF13188 PAS domain 165 217 0.0047 T 28-03-2018 IPR000014 PAS domain AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 Pfam PF13188 PAS domain 40 94 0.0046 T 28-03-2018 IPR000014 PAS domain AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 SUPERFAMILY SSF55785 153 271 5.06E-6 T 28-03-2018 IPR000014 PAS domain AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 SMART SM00091 292 361 6.7 T 28-03-2018 IPR000014 PAS domain AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 SMART SM00091 38 101 12.0 T 28-03-2018 IPR000014 PAS domain AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 SMART SM00091 165 232 2.2 T 28-03-2018 IPR000014 PAS domain AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 SMART SM00304 506 558 74.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 SMART SM00304 453 505 8.1E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 565 721 7.3E-54 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 Pfam PF13426 PAS domain 306 408 0.045 T 28-03-2018 IPR000014 PAS domain AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 SUPERFAMILY SSF58104 473 754 3.79E-75 T 28-03-2018 AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 Gene3D G3DSA:3.30.450.20 163 284 6.0E-11 T 28-03-2018 AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 Gene3D G3DSA:1.10.287.950 558 757 5.2E-49 T 28-03-2018 AL549_RS01995 9a6577cf8fc3555b39dce403d9beb23b 807 Gene3D G3DSA:1.10.287.950 423 557 8.2E-13 T 28-03-2018 AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82693 285 338 2.33E-18 T 28-03-2018 AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82693 151 197 2.33E-18 T 28-03-2018 AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82693 55 150 3.31E-23 T 28-03-2018 AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:3.30.70.1430 574 675 5.2E-12 T 28-03-2018 AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 PRINTS PR00702 Acriflavin resistance protein family signature 347 370 5.8E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 PRINTS PR00702 Acriflavin resistance protein family signature 53 71 5.8E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 PRINTS PR00702 Acriflavin resistance protein family signature 25 49 5.8E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 PRINTS PR00702 Acriflavin resistance protein family signature 454 477 5.8E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 PRINTS PR00702 Acriflavin resistance protein family signature 401 425 5.8E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 5.8E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82714 729 804 1.7E-8 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82866 307 506 5.49E-34 T 28-03-2018 AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:1.20.1640.10 820 1031 1.2E-40 T 28-03-2018 AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:1.20.1640.10 283 508 1.4E-29 T 28-03-2018 AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:3.30.2090.10 725 806 1.8E-10 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 Pfam PF00873 AcrB/AcrD/AcrF family 19 1029 2.1E-171 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:3.30.2090.10 196 282 2.4E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:3.30.70.1430 55 159 3.2E-32 T 28-03-2018 AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82866 810 1032 4.05E-47 T 28-03-2018 AL549_RS11330 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82714 199 282 8.37E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS16460 9cd622e54b8a443a8a2360426b4e16f7 100 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 20 96 2.2E-28 T 28-03-2018 IPR011846 Cyd operon protein YbgE AL549_RS16460 9cd622e54b8a443a8a2360426b4e16f7 100 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 8 99 1.0E-35 T 28-03-2018 IPR011846 Cyd operon protein YbgE AL549_RS16240 a87c87f4671a20b53ca621ef4aec127e 778 Gene3D G3DSA:3.20.20.210 390 759 5.2E-125 T 28-03-2018 AL549_RS16240 a87c87f4671a20b53ca621ef4aec127e 778 SUPERFAMILY SSF51726 396 757 7.46E-115 T 28-03-2018 AL549_RS16240 a87c87f4671a20b53ca621ef4aec127e 778 SUPERFAMILY SSF51726 5 393 2.88E-108 T 28-03-2018 AL549_RS16240 a87c87f4671a20b53ca621ef4aec127e 778 PIRSF PIRSF000382 2 763 0.0 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL549_RS16240 a87c87f4671a20b53ca621ef4aec127e 778 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 757 0.0 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL549_RS16240 a87c87f4671a20b53ca621ef4aec127e 778 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.918 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL549_RS16240 a87c87f4671a20b53ca621ef4aec127e 778 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 3.4E-151 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL549_RS16240 a87c87f4671a20b53ca621ef4aec127e 778 Gene3D G3DSA:3.20.20.210 3 389 3.7E-137 T 28-03-2018 AL549_RS16240 a87c87f4671a20b53ca621ef4aec127e 778 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 4.8E-119 T 28-03-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 SMART SM00493 3 138 5.8E-36 T 28-03-2018 IPR006171 TOPRIM domain AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 SUPERFAMILY SSF57783 813 869 3.57E-21 T 28-03-2018 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 Pfam PF08272 Topoisomerase I zinc-ribbon-like 828 868 9.8E-19 T 28-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 Pfam PF08272 Topoisomerase I zinc-ribbon-like 761 797 8.9E-11 T 28-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 639 1.2E-246 T 28-03-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 SUPERFAMILY SSF57783 748 811 2.72E-18 T 28-03-2018 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 Pfam PF01751 Toprim domain 5 148 7.7E-32 T 28-03-2018 IPR006171 TOPRIM domain AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 SUPERFAMILY SSF56712 3 614 5.76E-198 T 28-03-2018 IPR023405 DNA topoisomerase, type IA, core domain AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 Gene3D G3DSA:2.70.20.10 352 473 1.2E-37 T 28-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 Gene3D G3DSA:3.40.50.140 1 169 5.2E-49 T 28-03-2018 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 Pfam PF01131 DNA topoisomerase 163 569 7.8E-128 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 SMART SM00437 278 532 2.9E-119 T 28-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 Gene3D G3DSA:3.30.65.10 750 811 1.7E-8 T 28-03-2018 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 Gene3D G3DSA:3.30.65.10 699 749 1.5E-8 T 28-03-2018 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 Gene3D G3DSA:3.30.65.10 588 649 2.1E-10 T 28-03-2018 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 Gene3D G3DSA:2.20.25.10 813 867 7.5E-27 T 28-03-2018 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 712 749 4.4E-9 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 602 627 1.0E-4 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 SMART SM00436 139 227 1.3E-47 T 28-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 Gene3D G3DSA:1.10.460.10 474 587 2.8E-25 T 28-03-2018 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 Gene3D G3DSA:1.10.460.10 170 348 3.3E-45 T 28-03-2018 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 SUPERFAMILY SSF57783 704 746 2.21E-5 T 28-03-2018 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 112 125 1.9E-35 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 495 509 1.9E-35 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 1.9E-35 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 1.9E-35 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 1.9E-35 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 28-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AL549_RS16625 5e4b570ad918bd0b614f7230f977917f 874 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 727 53.546 T 28-03-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AL549_RS00905 1ce2d940651b59c5695c9a47aba06bd2 357 SUPERFAMILY SSF55781 32 182 5.23E-18 T 28-03-2018 IPR029016 GAF domain-like AL549_RS00905 1ce2d940651b59c5695c9a47aba06bd2 357 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 190 350 1.7E-51 T 28-03-2018 IPR000160 GGDEF domain AL549_RS00905 1ce2d940651b59c5695c9a47aba06bd2 357 Gene3D G3DSA:3.30.450.40 20 189 1.8E-14 T 28-03-2018 IPR029016 GAF domain-like AL549_RS00905 1ce2d940651b59c5695c9a47aba06bd2 357 Gene3D G3DSA:3.30.70.270 190 355 4.1E-55 T 28-03-2018 AL549_RS00905 1ce2d940651b59c5695c9a47aba06bd2 357 Pfam PF01590 GAF domain 47 178 8.6E-7 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL549_RS00905 1ce2d940651b59c5695c9a47aba06bd2 357 SUPERFAMILY SSF55073 196 350 1.57E-49 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS00905 1ce2d940651b59c5695c9a47aba06bd2 357 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 348 1.3E-48 T 28-03-2018 IPR000160 GGDEF domain AL549_RS00905 1ce2d940651b59c5695c9a47aba06bd2 357 SMART SM00267 181 352 4.1E-59 T 28-03-2018 IPR000160 GGDEF domain AL549_RS00905 1ce2d940651b59c5695c9a47aba06bd2 357 SMART SM00065 44 188 1.2E-4 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL549_RS02190 ffa68f611f73dc8d66658a6bf31d083d 1043 Gene3D G3DSA:3.40.309.10 827 1017 3.7E-46 T 28-03-2018 AL549_RS02190 ffa68f611f73dc8d66658a6bf31d083d 1043 SUPERFAMILY SSF81935 17 188 2.48E-64 T 28-03-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL549_RS02190 ffa68f611f73dc8d66658a6bf31d083d 1043 Gene3D G3DSA:1.20.5.550 18 66 5.5E-13 T 28-03-2018 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL549_RS02190 ffa68f611f73dc8d66658a6bf31d083d 1043 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 526 1036 5.3E-250 T 28-03-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL549_RS02190 ffa68f611f73dc8d66658a6bf31d083d 1043 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 74 187 8.9E-46 T 28-03-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL549_RS02190 ffa68f611f73dc8d66658a6bf31d083d 1043 PIRSF PIRSF000197 3 1042 0.0 T 28-03-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL549_RS02190 ffa68f611f73dc8d66658a6bf31d083d 1043 Pfam PF01619 Proline dehydrogenase 197 490 1.7E-93 T 28-03-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 AL549_RS02190 ffa68f611f73dc8d66658a6bf31d083d 1043 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 838 849 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL549_RS02190 ffa68f611f73dc8d66658a6bf31d083d 1043 Gene3D G3DSA:3.20.20.220 106 528 1.5E-108 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like AL549_RS02190 ffa68f611f73dc8d66658a6bf31d083d 1043 Gene3D G3DSA:3.40.605.10 547 826 2.0E-76 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL549_RS02190 ffa68f611f73dc8d66658a6bf31d083d 1043 SUPERFAMILY SSF51730 190 532 5.89E-115 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like AL549_RS02190 ffa68f611f73dc8d66658a6bf31d083d 1043 SUPERFAMILY SSF53720 553 1037 2.88E-128 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL549_RS02190 ffa68f611f73dc8d66658a6bf31d083d 1043 Pfam PF00171 Aldehyde dehydrogenase family 582 1036 1.6E-118 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL549_RS22345 d57bda5eacdee73a0d468b94d48edfad 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.2E-51 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL549_RS22345 d57bda5eacdee73a0d468b94d48edfad 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.2E-51 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL549_RS22345 d57bda5eacdee73a0d468b94d48edfad 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.2E-51 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL549_RS22345 d57bda5eacdee73a0d468b94d48edfad 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.2E-51 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL549_RS22345 d57bda5eacdee73a0d468b94d48edfad 249 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 241 18.177 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL549_RS22345 d57bda5eacdee73a0d468b94d48edfad 249 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 1.4E-74 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL549_RS22345 d57bda5eacdee73a0d468b94d48edfad 249 ProSitePatterns PS01218 TatC family signature. 155 174 - T 28-03-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site AL549_RS22345 d57bda5eacdee73a0d468b94d48edfad 249 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 1.3E-66 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL549_RS10115 2258275cd3f8420fff3ff2ad9974e81b 656 Pfam PF01751 Toprim domain 4 134 6.5E-17 T 28-03-2018 IPR006171 TOPRIM domain AL549_RS10115 2258275cd3f8420fff3ff2ad9974e81b 656 Gene3D G3DSA:1.10.460.10 486 656 1.3E-24 T 28-03-2018 AL549_RS10115 2258275cd3f8420fff3ff2ad9974e81b 656 Gene3D G3DSA:2.70.20.10 371 485 4.4E-23 T 28-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AL549_RS10115 2258275cd3f8420fff3ff2ad9974e81b 656 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 647 65.196 T 28-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AL549_RS10115 2258275cd3f8420fff3ff2ad9974e81b 656 SMART SM00436 129 224 1.5E-32 T 28-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AL549_RS10115 2258275cd3f8420fff3ff2ad9974e81b 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.9E-26 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL549_RS10115 2258275cd3f8420fff3ff2ad9974e81b 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.9E-26 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL549_RS10115 2258275cd3f8420fff3ff2ad9974e81b 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.9E-26 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL549_RS10115 2258275cd3f8420fff3ff2ad9974e81b 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.9E-26 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL549_RS10115 2258275cd3f8420fff3ff2ad9974e81b 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.9E-26 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL549_RS10115 2258275cd3f8420fff3ff2ad9974e81b 656 Pfam PF01131 DNA topoisomerase 159 597 2.9E-113 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL549_RS10115 2258275cd3f8420fff3ff2ad9974e81b 656 Gene3D G3DSA:1.10.460.10 162 364 2.7E-39 T 28-03-2018 AL549_RS10115 2258275cd3f8420fff3ff2ad9974e81b 656 SMART SM00437 284 563 1.6E-86 T 28-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AL549_RS10115 2258275cd3f8420fff3ff2ad9974e81b 656 SUPERFAMILY SSF56712 3 612 6.02E-185 T 28-03-2018 IPR023405 DNA topoisomerase, type IA, core domain AL549_RS10115 2258275cd3f8420fff3ff2ad9974e81b 656 Gene3D G3DSA:3.40.50.140 2 157 2.9E-39 T 28-03-2018 AL549_RS10115 2258275cd3f8420fff3ff2ad9974e81b 656 SMART SM00493 2 125 1.8E-27 T 28-03-2018 IPR006171 TOPRIM domain AL549_RS10115 2258275cd3f8420fff3ff2ad9974e81b 656 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 28-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AL549_RS10115 2258275cd3f8420fff3ff2ad9974e81b 656 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 638 8.9E-235 T 28-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 SUPERFAMILY SSF50677 226 414 3.14E-56 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 Gene3D G3DSA:3.40.50.620 1 228 1.3E-79 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 Gene3D G3DSA:1.10.730.10 646 793 1.8E-32 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 856 23.405 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 3.1E-79 T 28-03-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 SUPERFAMILY SSF52374 4 226 4.86E-147 T 28-03-2018 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 SUPERFAMILY SSF52374 415 666 4.86E-147 T 28-03-2018 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 649 1.8E-7 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 570 5.0E-9 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 1.4E-25 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 Pfam PF08264 Anticodon-binding domain of tRNA 699 820 2.0E-16 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 SUPERFAMILY SSF47323 660 856 2.8E-34 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.2E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 7.2E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 7.2E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 522 544 7.2E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 555 565 7.2E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.2E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.2E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 856 0.0 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 Gene3D G3DSA:3.90.740.10 229 401 1.9E-55 T 28-03-2018 AL549_RS08855 641339a60f369be5d0ec53dab6f5221e 857 Gene3D G3DSA:3.40.50.620 402 645 2.0E-58 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS20235 3fba9d6adeda795dfe253e4048d2c9d3 80 Gene3D G3DSA:1.20.5.370 45 80 5.1E-9 T 28-03-2018 AL549_RS20235 3fba9d6adeda795dfe253e4048d2c9d3 80 Gene3D G3DSA:1.20.5.370 13 44 2.5E-11 T 28-03-2018 AL549_RS20235 3fba9d6adeda795dfe253e4048d2c9d3 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.654 T 28-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 AL549_RS20235 3fba9d6adeda795dfe253e4048d2c9d3 80 Pfam PF06005 Cell division protein ZapB 1 77 6.0E-24 T 28-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 AL549_RS12355 65b1ccf3478acebddd22de9d62bb5527 278 PIRSF PIRSF012524 1 278 3.1E-99 T 28-03-2018 IPR014464 Conserved virulence factor B AL549_RS12355 65b1ccf3478acebddd22de9d62bb5527 278 Pfam PF13509 S1 domain 71 132 2.1E-5 T 28-03-2018 AL549_RS12355 65b1ccf3478acebddd22de9d62bb5527 278 Pfam PF13509 S1 domain 4 63 4.3E-22 T 28-03-2018 AL549_RS12355 65b1ccf3478acebddd22de9d62bb5527 278 Gene3D G3DSA:1.10.10.10 218 275 8.1E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS12355 65b1ccf3478acebddd22de9d62bb5527 278 Gene3D G3DSA:2.40.50.140 5 57 0.25 T 28-03-2018 AL549_RS12355 65b1ccf3478acebddd22de9d62bb5527 278 Gene3D G3DSA:2.40.50.140 58 209 2.6E-15 T 28-03-2018 AL549_RS10290 a7517b0b1d3981f44949329ff3a90bc4 198 Pfam PF04060 Putative Fe-S cluster 44 75 1.0E-14 T 28-03-2018 IPR007202 4Fe-4S domain GO:0051536 AL549_RS10290 a7517b0b1d3981f44949329ff3a90bc4 198 PIRSF PIRSF005784 3 188 1.4E-86 T 28-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 AL549_RS10290 a7517b0b1d3981f44949329ff3a90bc4 198 Gene3D G3DSA:3.30.70.20 145 179 1.9E-6 T 28-03-2018 AL549_RS10290 a7517b0b1d3981f44949329ff3a90bc4 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS10290 a7517b0b1d3981f44949329ff3a90bc4 198 Gene3D G3DSA:3.30.70.20 25 122 1.9E-10 T 28-03-2018 AL549_RS10290 a7517b0b1d3981f44949329ff3a90bc4 198 SUPERFAMILY SSF54862 37 173 4.45E-31 T 28-03-2018 AL549_RS10290 a7517b0b1d3981f44949329ff3a90bc4 198 Gene3D G3DSA:3.30.70.20 123 144 4.8E-10 T 28-03-2018 AL549_RS10290 a7517b0b1d3981f44949329ff3a90bc4 198 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 182 42.78 T 28-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 AL549_RS10290 a7517b0b1d3981f44949329ff3a90bc4 198 Pfam PF14697 4Fe-4S dicluster domain 107 161 6.3E-18 T 28-03-2018 AL549_RS10290 a7517b0b1d3981f44949329ff3a90bc4 198 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 186 2.7E-86 T 28-03-2018 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 AL549_RS22895 2c56f30737160ca58729e64ae06df762 422 Gene3D G3DSA:3.40.50.2000 234 407 1.3E-15 T 28-03-2018 AL549_RS22895 2c56f30737160ca58729e64ae06df762 422 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 212 8.6E-60 T 28-03-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AL549_RS22895 2c56f30737160ca58729e64ae06df762 422 SUPERFAMILY SSF53756 60 407 2.51E-17 T 28-03-2018 AL549_RS22895 2c56f30737160ca58729e64ae06df762 422 Pfam PF00534 Glycosyl transferases group 1 247 402 2.8E-8 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL549_RS22895 2c56f30737160ca58729e64ae06df762 422 Gene3D G3DSA:3.20.20.20 49 233 0.0013 T 28-03-2018 AL549_RS11735 22091e805b44ad1d1f932e458d253675 191 Gene3D G3DSA:1.10.3420.10 55 145 3.0E-17 T 28-03-2018 AL549_RS11735 22091e805b44ad1d1f932e458d253675 191 Gene3D G3DSA:1.10.3420.10 9 54 2.4E-4 T 28-03-2018 AL549_RS11735 22091e805b44ad1d1f932e458d253675 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 1.4E-9 T 28-03-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AL549_RS13780 d2dffe2d9cf45e12bf4007937f26874b 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.3E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS22010 d85f4f106e445e0287d17ec6050fff29 277 Gene3D G3DSA:3.40.50.720 115 277 1.3E-31 T 28-03-2018 AL549_RS22010 d85f4f106e445e0287d17ec6050fff29 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 32.674 T 28-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AL549_RS22010 d85f4f106e445e0287d17ec6050fff29 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 1.9E-14 T 28-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AL549_RS22010 d85f4f106e445e0287d17ec6050fff29 277 Gene3D G3DSA:3.40.50.10860 1 114 1.1E-36 T 28-03-2018 AL549_RS22010 d85f4f106e445e0287d17ec6050fff29 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 1.4E-87 T 28-03-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AL549_RS22010 d85f4f106e445e0287d17ec6050fff29 277 SUPERFAMILY SSF53223 6 105 8.63E-32 T 28-03-2018 AL549_RS22010 d85f4f106e445e0287d17ec6050fff29 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 2.9E-24 T 28-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AL549_RS22010 d85f4f106e445e0287d17ec6050fff29 277 SUPERFAMILY SSF51735 106 273 7.08E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS18860 5c44d97a15ec7a7841eccefe514bd66e 222 SUPERFAMILY SSF53056 2 212 3.01E-73 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL549_RS18860 5c44d97a15ec7a7841eccefe514bd66e 222 Pfam PF00484 Carbonic anhydrase 38 188 1.5E-48 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL549_RS18860 5c44d97a15ec7a7841eccefe514bd66e 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL549_RS18860 5c44d97a15ec7a7841eccefe514bd66e 222 SMART SM00947 30 192 3.2E-63 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL549_RS18860 5c44d97a15ec7a7841eccefe514bd66e 222 Gene3D G3DSA:3.40.1050.10 1 220 4.9E-72 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL549_RS18860 5c44d97a15ec7a7841eccefe514bd66e 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL549_RS06635 d063ebaf6663559a41e3a62cf5266e70 519 SUPERFAMILY SSF58104 231 518 2.49E-69 T 28-03-2018 AL549_RS06635 d063ebaf6663559a41e3a62cf5266e70 519 SUPERFAMILY SSF55785 22 115 2.51E-26 T 28-03-2018 IPR000014 PAS domain AL549_RS06635 d063ebaf6663559a41e3a62cf5266e70 519 Gene3D G3DSA:1.10.287.950 285 487 1.6E-51 T 28-03-2018 AL549_RS06635 d063ebaf6663559a41e3a62cf5266e70 519 SMART SM00086 80 121 0.0051 T 28-03-2018 IPR001610 PAC motif AL549_RS06635 d063ebaf6663559a41e3a62cf5266e70 519 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 300 483 7.4E-42 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS06635 d063ebaf6663559a41e3a62cf5266e70 519 SMART SM00283 256 517 5.2E-63 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS06635 d063ebaf6663559a41e3a62cf5266e70 519 Gene3D G3DSA:3.40.50.10600 17 128 2.4E-29 T 28-03-2018 AL549_RS06635 d063ebaf6663559a41e3a62cf5266e70 519 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 110 2.2E-12 T 28-03-2018 IPR000014 PAS domain AL549_RS06635 d063ebaf6663559a41e3a62cf5266e70 519 Pfam PF08447 PAS fold 31 115 3.7E-21 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 AL549_RS06635 d063ebaf6663559a41e3a62cf5266e70 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 412 3.1E-5 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS06635 d063ebaf6663559a41e3a62cf5266e70 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 270 299 3.1E-5 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS06635 d063ebaf6663559a41e3a62cf5266e70 519 Gene3D G3DSA:1.10.287.950 189 284 0.0023 T 28-03-2018 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 Gene3D G3DSA:3.40.50.720 164 335 5.2E-28 T 28-03-2018 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 9.5E-30 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 4.1E-60 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 2.4E-28 T 28-03-2018 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.4E-28 T 28-03-2018 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.4E-28 T 28-03-2018 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.4E-28 T 28-03-2018 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 2.4E-28 T 28-03-2018 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 PIRSF PIRSF000350 1 463 5.4E-71 T 28-03-2018 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 SUPERFAMILY SSF55424 344 463 1.89E-30 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 Gene3D G3DSA:3.30.390.30 336 463 2.5E-34 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 65.336 T 28-03-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 Gene3D G3DSA:3.50.50.60 3 163 1.8E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 7.3E-52 T 28-03-2018 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 7.3E-52 T 28-03-2018 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 7.3E-52 T 28-03-2018 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 7.3E-52 T 28-03-2018 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 7.3E-52 T 28-03-2018 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 7.3E-52 T 28-03-2018 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 7.3E-52 T 28-03-2018 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 7.3E-52 T 28-03-2018 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 7.3E-52 T 28-03-2018 AL549_RS21125 1dc51d1e3c87f631ee57c7295b0b175e 466 SUPERFAMILY SSF51905 5 319 2.35E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS23770 4bce0595e48c0848885869d870f5d21e 160 Gene3D G3DSA:3.30.70.560 1 156 2.0E-37 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL549_RS23770 4bce0595e48c0848885869d870f5d21e 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 129 2.1E-29 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL549_RS23770 4bce0595e48c0848885869d870f5d21e 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 7.1E-25 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL549_RS23770 4bce0595e48c0848885869d870f5d21e 160 SUPERFAMILY SSF55083 1 149 4.97E-38 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL549_RS05710 a459d705acca24a42e265175cb3c7f03 124 Pfam PF11782 Protein of unknown function (DUF3319) 1 89 6.8E-47 T 28-03-2018 IPR021753 Protein of unknown function DUF3319 AL549_RS05750 b80bdc806b09cbc03ff50125f3d10c2b 268 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 25 268 41.055 T 28-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AL549_RS05750 b80bdc806b09cbc03ff50125f3d10c2b 268 SUPERFAMILY SSF88713 26 266 4.6E-92 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL549_RS05750 b80bdc806b09cbc03ff50125f3d10c2b 268 Gene3D G3DSA:3.20.20.370 26 268 4.4E-98 T 28-03-2018 AL549_RS05750 b80bdc806b09cbc03ff50125f3d10c2b 268 Pfam PF03746 LamB/YcsF family 27 265 3.6E-96 T 28-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AL549_RS04475 68fec07a3aae257063eebd92ba725aa5 372 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 268 342 2.2E-12 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS04475 68fec07a3aae257063eebd92ba725aa5 372 PRINTS PR01166 Cytochrome c oxidase subunit II signature 196 213 6.8E-40 T 28-03-2018 AL549_RS04475 68fec07a3aae257063eebd92ba725aa5 372 PRINTS PR01166 Cytochrome c oxidase subunit II signature 71 83 6.8E-40 T 28-03-2018 AL549_RS04475 68fec07a3aae257063eebd92ba725aa5 372 PRINTS PR01166 Cytochrome c oxidase subunit II signature 152 173 6.8E-40 T 28-03-2018 AL549_RS04475 68fec07a3aae257063eebd92ba725aa5 372 PRINTS PR01166 Cytochrome c oxidase subunit II signature 176 196 6.8E-40 T 28-03-2018 AL549_RS04475 68fec07a3aae257063eebd92ba725aa5 372 PRINTS PR01166 Cytochrome c oxidase subunit II signature 105 124 6.8E-40 T 28-03-2018 AL549_RS04475 68fec07a3aae257063eebd92ba725aa5 372 PRINTS PR01166 Cytochrome c oxidase subunit II signature 214 231 6.8E-40 T 28-03-2018 AL549_RS04475 68fec07a3aae257063eebd92ba725aa5 372 PRINTS PR01166 Cytochrome c oxidase subunit II signature 83 103 6.8E-40 T 28-03-2018 AL549_RS04475 68fec07a3aae257063eebd92ba725aa5 372 SUPERFAMILY SSF46626 252 357 2.58E-24 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS04475 68fec07a3aae257063eebd92ba725aa5 372 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 177 225 - T 28-03-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04475 68fec07a3aae257063eebd92ba725aa5 372 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 109 231 2.5E-36 T 28-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04475 68fec07a3aae257063eebd92ba725aa5 372 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 23 241 2.7E-60 T 28-03-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04475 68fec07a3aae257063eebd92ba725aa5 372 Gene3D G3DSA:1.10.287.90 11 105 2.0E-26 T 28-03-2018 AL549_RS04475 68fec07a3aae257063eebd92ba725aa5 372 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 11 94 6.1E-15 T 28-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04475 68fec07a3aae257063eebd92ba725aa5 372 SUPERFAMILY SSF81464 12 103 1.96E-27 T 28-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04475 68fec07a3aae257063eebd92ba725aa5 372 SUPERFAMILY SSF49503 101 301 2.59E-52 T 28-03-2018 IPR008972 Cupredoxin AL549_RS04475 68fec07a3aae257063eebd92ba725aa5 372 Gene3D G3DSA:1.10.760.10 237 347 8.2E-22 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS04475 68fec07a3aae257063eebd92ba725aa5 372 Gene3D G3DSA:2.60.40.420 106 236 2.5E-47 T 28-03-2018 IPR008972 Cupredoxin AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 SUPERFAMILY SSF55008 1 62 3.67E-7 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 327 903 8.3E-183 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 Gene3D G3DSA:3.30.70.100 1 62 4.4E-7 T 28-03-2018 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 SUPERFAMILY SSF81665 343 398 2.48E-9 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 SUPERFAMILY SSF81665 495 590 2.48E-9 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 Gene3D G3DSA:3.30.70.100 167 259 2.0E-17 T 28-03-2018 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 36 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 817 829 2.8E-27 T 28-03-2018 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 596 610 2.8E-27 T 28-03-2018 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 794 813 2.8E-27 T 28-03-2018 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 719 730 2.8E-27 T 28-03-2018 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 741 751 2.8E-27 T 28-03-2018 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 444 458 2.8E-27 T 28-03-2018 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 825 850 3.9E-5 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 794 810 3.9E-5 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 366 871 9.9E-89 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 Gene3D G3DSA:1.20.1110.10 359 614 6.9E-44 T 28-03-2018 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 ProSitePatterns PS01047 Heavy-metal-associated domain. 175 204 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 Gene3D G3DSA:3.30.70.100 63 127 2.2E-5 T 28-03-2018 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 SUPERFAMILY SSF81653 397 494 4.84E-26 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 308 904 4.0E-186 T 28-03-2018 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 SUPERFAMILY SSF55008 171 237 3.8E-15 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 Pfam PF00403 Heavy-metal-associated domain 175 234 1.7E-12 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 Pfam PF00403 Heavy-metal-associated domain 5 61 3.1E-6 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 SUPERFAMILY SSF56784 594 614 5.63E-60 T 28-03-2018 IPR023214 HAD-like domain AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 SUPERFAMILY SSF56784 652 900 5.63E-60 T 28-03-2018 IPR023214 HAD-like domain AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 Pfam PF00122 E1-E2 ATPase 395 575 3.4E-50 T 28-03-2018 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 598 604 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 Gene3D G3DSA:3.40.1110.10 615 721 3.6E-21 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 Gene3D G3DSA:3.40.50.1000 722 859 2.8E-45 T 28-03-2018 IPR023214 HAD-like domain AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 SUPERFAMILY SSF55008 66 125 1.57E-7 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL549_RS09075 0e08fa62997bfac62310aeda44b6854e 912 Pfam PF00702 haloacid dehalogenase-like hydrolase 592 808 1.1E-43 T 28-03-2018 AL549_RS17060 704950e0fae3b6e7bfeb5c0a3beb668f 285 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 28-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL549_RS17060 704950e0fae3b6e7bfeb5c0a3beb668f 285 Gene3D G3DSA:3.40.50.10860 11 140 3.1E-49 T 28-03-2018 AL549_RS17060 704950e0fae3b6e7bfeb5c0a3beb668f 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 28-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL549_RS17060 704950e0fae3b6e7bfeb5c0a3beb668f 285 SUPERFAMILY SSF53223 1 122 1.25E-39 T 28-03-2018 AL549_RS17060 704950e0fae3b6e7bfeb5c0a3beb668f 285 Gene3D G3DSA:3.40.50.720 141 264 9.1E-40 T 28-03-2018 AL549_RS17060 704950e0fae3b6e7bfeb5c0a3beb668f 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 6.8E-39 T 28-03-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL549_RS17060 704950e0fae3b6e7bfeb5c0a3beb668f 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.04 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL549_RS17060 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.0E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL549_RS17060 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.0E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL549_RS17060 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.0E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL549_RS17060 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.0E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL549_RS17060 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.0E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL549_RS17060 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.0E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL549_RS17060 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.0E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL549_RS17060 704950e0fae3b6e7bfeb5c0a3beb668f 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 4.0E-68 T 28-03-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL549_RS17060 704950e0fae3b6e7bfeb5c0a3beb668f 285 SUPERFAMILY SSF51735 123 280 1.06E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS00170 cf7d3e190ab326a7b2953e18d91b4e03 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 4.3E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00170 cf7d3e190ab326a7b2953e18d91b4e03 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 4.3E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00170 cf7d3e190ab326a7b2953e18d91b4e03 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 4.3E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00170 cf7d3e190ab326a7b2953e18d91b4e03 224 SMART SM00421 156 213 1.6E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00170 cf7d3e190ab326a7b2953e18d91b4e03 224 ProSitePatterns PS00622 LuxR-type HTH domain signature. 173 200 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00170 cf7d3e190ab326a7b2953e18d91b4e03 224 SUPERFAMILY SSF46894 153 216 1.84E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS00170 cf7d3e190ab326a7b2953e18d91b4e03 224 Gene3D G3DSA:1.10.10.10 120 219 2.4E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00170 cf7d3e190ab326a7b2953e18d91b4e03 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 4.8E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS03770 6d2469f3c2688221fa0314b9bb1b34b9 687 SUPERFAMILY SSF53300 307 476 1.02E-29 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS03770 6d2469f3c2688221fa0314b9bb1b34b9 687 Pfam PF08487 Vault protein inter-alpha-trypsin domain 48 158 2.8E-27 T 28-03-2018 IPR013694 VIT domain AL549_RS03770 6d2469f3c2688221fa0314b9bb1b34b9 687 Pfam PF13768 von Willebrand factor type A domain 312 460 8.9E-17 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS03770 6d2469f3c2688221fa0314b9bb1b34b9 687 SMART SM00327 308 481 1.2E-9 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS03770 6d2469f3c2688221fa0314b9bb1b34b9 687 SMART SM00609 32 160 1.6E-6 T 28-03-2018 IPR013694 VIT domain AL549_RS03770 6d2469f3c2688221fa0314b9bb1b34b9 687 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 663 684 0.0031 T 28-03-2018 IPR020008 GlyGly-CTERM domain AL549_RS03770 6d2469f3c2688221fa0314b9bb1b34b9 687 Gene3D G3DSA:3.40.50.410 295 485 2.3E-27 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS02130 24f006148f0b65fb4c0a61236d439fa4 532 Gene3D G3DSA:1.10.560.10 374 516 5.6E-24 T 28-03-2018 IPR027413 GroEL-like equatorial domain AL549_RS02130 24f006148f0b65fb4c0a61236d439fa4 532 PRINTS PR00298 60kDa chaperonin signature 350 375 2.8E-72 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL549_RS02130 24f006148f0b65fb4c0a61236d439fa4 532 PRINTS PR00298 60kDa chaperonin signature 27 53 2.8E-72 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL549_RS02130 24f006148f0b65fb4c0a61236d439fa4 532 PRINTS PR00298 60kDa chaperonin signature 83 110 2.8E-72 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL549_RS02130 24f006148f0b65fb4c0a61236d439fa4 532 PRINTS PR00298 60kDa chaperonin signature 398 419 2.8E-72 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL549_RS02130 24f006148f0b65fb4c0a61236d439fa4 532 PRINTS PR00298 60kDa chaperonin signature 268 291 2.8E-72 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL549_RS02130 24f006148f0b65fb4c0a61236d439fa4 532 Hamap MF_00600 60 kDa chaperonin [groL]. 2 532 39.881 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL549_RS02130 24f006148f0b65fb4c0a61236d439fa4 532 SUPERFAMILY SSF48592 406 521 7.16E-77 T 28-03-2018 AL549_RS02130 24f006148f0b65fb4c0a61236d439fa4 532 SUPERFAMILY SSF48592 7 134 7.16E-77 T 28-03-2018 AL549_RS02130 24f006148f0b65fb4c0a61236d439fa4 532 SUPERFAMILY SSF54849 137 203 1.37E-24 T 28-03-2018 AL549_RS02130 24f006148f0b65fb4c0a61236d439fa4 532 Gene3D G3DSA:3.50.7.10 189 373 1.6E-94 T 28-03-2018 IPR027409 GroEL-like apical domain AL549_RS02130 24f006148f0b65fb4c0a61236d439fa4 532 SUPERFAMILY SSF52029 185 376 4.36E-80 T 28-03-2018 IPR027409 GroEL-like apical domain AL549_RS02130 24f006148f0b65fb4c0a61236d439fa4 532 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 28-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL549_RS02130 24f006148f0b65fb4c0a61236d439fa4 532 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.4E-98 T 28-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AL549_RS02130 24f006148f0b65fb4c0a61236d439fa4 532 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 524 2.4E-250 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL549_RS02130 24f006148f0b65fb4c0a61236d439fa4 532 Gene3D G3DSA:1.10.560.10 1 188 1.4E-42 T 28-03-2018 IPR027413 GroEL-like equatorial domain AL549_RS18960 7a863519309dcbf9e5e98ba7c595d9b7 458 Gene3D G3DSA:3.40.50.1970 110 199 7.6E-5 T 28-03-2018 AL549_RS18960 7a863519309dcbf9e5e98ba7c595d9b7 458 Pfam PF02978 Signal peptide binding domain 329 427 3.5E-34 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AL549_RS18960 7a863519309dcbf9e5e98ba7c595d9b7 458 Gene3D G3DSA:1.20.120.140 1 91 7.5E-30 T 28-03-2018 AL549_RS18960 7a863519309dcbf9e5e98ba7c595d9b7 458 SMART SM00382 99 247 2.2E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS18960 7a863519309dcbf9e5e98ba7c595d9b7 458 Gene3D G3DSA:1.20.120.140 200 310 2.6E-33 T 28-03-2018 AL549_RS18960 7a863519309dcbf9e5e98ba7c595d9b7 458 SUPERFAMILY SSF52540 42 353 2.1E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18960 7a863519309dcbf9e5e98ba7c595d9b7 458 SUPERFAMILY SSF47446 329 430 1.08E-38 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AL549_RS18960 7a863519309dcbf9e5e98ba7c595d9b7 458 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.251 T 28-03-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 AL549_RS18960 7a863519309dcbf9e5e98ba7c595d9b7 458 SMART SM00962 100 296 6.1E-114 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL549_RS18960 7a863519309dcbf9e5e98ba7c595d9b7 458 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL549_RS18960 7a863519309dcbf9e5e98ba7c595d9b7 458 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 5.9E-22 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL549_RS18960 7a863519309dcbf9e5e98ba7c595d9b7 458 SMART SM00963 1 86 1.1E-36 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL549_RS18960 7a863519309dcbf9e5e98ba7c595d9b7 458 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 9.0E-74 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL549_RS18960 7a863519309dcbf9e5e98ba7c595d9b7 458 Gene3D G3DSA:1.10.260.30 328 432 1.6E-39 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AL549_RS18960 7a863519309dcbf9e5e98ba7c595d9b7 458 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.8E-179 T 28-03-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AL549_RS12290 81da7b24412c20c17c81b6db2f234425 497 Gene3D G3DSA:1.10.10.60 384 491 4.7E-14 T 28-03-2018 AL549_RS12290 81da7b24412c20c17c81b6db2f234425 497 SUPERFAMILY SSF46689 439 492 7.17E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS12290 81da7b24412c20c17c81b6db2f234425 497 Pfam PF02954 Bacterial regulatory protein, Fis family 451 487 1.1E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS12290 81da7b24412c20c17c81b6db2f234425 497 Gene3D G3DSA:3.40.50.2300 1 127 9.5E-27 T 28-03-2018 AL549_RS12290 81da7b24412c20c17c81b6db2f234425 497 Gene3D G3DSA:3.40.50.300 128 313 2.6E-22 T 28-03-2018 AL549_RS12290 81da7b24412c20c17c81b6db2f234425 497 SUPERFAMILY SSF52540 142 385 2.55E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS12290 81da7b24412c20c17c81b6db2f234425 497 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL549_RS12290 81da7b24412c20c17c81b6db2f234425 497 Gene3D G3DSA:1.10.8.60 314 383 4.4E-25 T 28-03-2018 AL549_RS12290 81da7b24412c20c17c81b6db2f234425 497 SMART SM00448 3 114 2.6E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS12290 81da7b24412c20c17c81b6db2f234425 497 Pfam PF00072 Response regulator receiver domain 5 114 1.3E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS12290 81da7b24412c20c17c81b6db2f234425 497 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL549_RS12290 81da7b24412c20c17c81b6db2f234425 497 SUPERFAMILY SSF52172 3 186 3.98E-36 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS12290 81da7b24412c20c17c81b6db2f234425 497 SMART SM00382 162 304 1.3E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS12290 81da7b24412c20c17c81b6db2f234425 497 Pfam PF00158 Sigma-54 interaction domain 143 309 1.1E-67 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL549_RS09235 1270934fb842d2a3fdfddd6c1b9d292b 322 Gene3D G3DSA:3.40.50.1100 138 322 2.2E-59 T 28-03-2018 AL549_RS09235 1270934fb842d2a3fdfddd6c1b9d292b 322 Gene3D G3DSA:3.40.50.1100 40 137 1.9E-32 T 28-03-2018 AL549_RS09235 1270934fb842d2a3fdfddd6c1b9d292b 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 3.9E-68 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL549_RS09235 1270934fb842d2a3fdfddd6c1b9d292b 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 4.7E-143 T 28-03-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AL549_RS09235 1270934fb842d2a3fdfddd6c1b9d292b 322 SUPERFAMILY SSF53686 3 313 2.36E-96 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL549_RS09235 1270934fb842d2a3fdfddd6c1b9d292b 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 4.5E-136 T 28-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AL549_RS09235 1270934fb842d2a3fdfddd6c1b9d292b 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AL549_RS06070 77aff0d890ff4ce75ec16bdb3a95606a 380 PRINTS PR00107 Phosphocarrier protein signature 302 318 5.5E-16 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS06070 77aff0d890ff4ce75ec16bdb3a95606a 380 PRINTS PR00107 Phosphocarrier protein signature 330 345 5.5E-16 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS06070 77aff0d890ff4ce75ec16bdb3a95606a 380 PRINTS PR00107 Phosphocarrier protein signature 345 362 5.5E-16 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS06070 77aff0d890ff4ce75ec16bdb3a95606a 380 Pfam PF00381 PTS HPr component phosphorylation site 295 373 6.0E-25 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS06070 77aff0d890ff4ce75ec16bdb3a95606a 380 SUPERFAMILY SSF55804 145 276 2.27E-15 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS06070 77aff0d890ff4ce75ec16bdb3a95606a 380 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 302 309 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL549_RS06070 77aff0d890ff4ce75ec16bdb3a95606a 380 SUPERFAMILY SSF55804 4 141 1.7E-38 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS06070 77aff0d890ff4ce75ec16bdb3a95606a 380 Gene3D G3DSA:3.30.1340.10 287 374 3.2E-26 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS06070 77aff0d890ff4ce75ec16bdb3a95606a 380 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 140 7.4E-32 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AL549_RS06070 77aff0d890ff4ce75ec16bdb3a95606a 380 Gene3D G3DSA:3.40.930.10 145 278 5.8E-4 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS06070 77aff0d890ff4ce75ec16bdb3a95606a 380 Gene3D G3DSA:3.40.930.10 3 143 1.2E-31 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS06070 77aff0d890ff4ce75ec16bdb3a95606a 380 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain AL549_RS06070 77aff0d890ff4ce75ec16bdb3a95606a 380 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 294 373 2.2E-22 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS06070 77aff0d890ff4ce75ec16bdb3a95606a 380 SUPERFAMILY SSF55594 294 379 2.75E-23 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS22755 6dff2c26798d17d8469c47dc72b9584e 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 3.2E-25 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AL549_RS22755 6dff2c26798d17d8469c47dc72b9584e 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 42.456 T 28-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AL549_RS22755 6dff2c26798d17d8469c47dc72b9584e 269 SMART SM01232 129 221 2.0E-44 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AL549_RS22755 6dff2c26798d17d8469c47dc72b9584e 269 SUPERFAMILY SSF57716 217 268 3.71E-16 T 28-03-2018 AL549_RS22755 6dff2c26798d17d8469c47dc72b9584e 269 SUPERFAMILY SSF81624 2 134 7.72E-39 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AL549_RS22755 6dff2c26798d17d8469c47dc72b9584e 269 Gene3D G3DSA:1.10.8.50 131 269 2.4E-49 T 28-03-2018 AL549_RS22755 6dff2c26798d17d8469c47dc72b9584e 269 Gene3D G3DSA:3.20.190.10 1 130 4.3E-34 T 28-03-2018 AL549_RS22755 6dff2c26798d17d8469c47dc72b9584e 269 SUPERFAMILY SSF46946 130 221 1.15E-28 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AL549_RS22755 6dff2c26798d17d8469c47dc72b9584e 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 268 1.5E-7 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AL549_RS22755 6dff2c26798d17d8469c47dc72b9584e 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 28-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AL549_RS22755 6dff2c26798d17d8469c47dc72b9584e 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 5.8E-94 T 28-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AL549_RS22755 6dff2c26798d17d8469c47dc72b9584e 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 4.3E-30 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AL549_RS22755 6dff2c26798d17d8469c47dc72b9584e 269 SMART SM00898 2 115 6.6E-52 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AL549_RS23645 e41dd8658e7ece2ded71ee640962ac2a 348 Gene3D G3DSA:3.40.50.2000 186 314 1.3E-7 T 28-03-2018 AL549_RS23645 e41dd8658e7ece2ded71ee640962ac2a 348 Gene3D G3DSA:3.40.50.2000 1 185 8.9E-6 T 28-03-2018 AL549_RS23645 e41dd8658e7ece2ded71ee640962ac2a 348 SUPERFAMILY SSF53756 1 306 5.5E-13 T 28-03-2018 AL549_RS23645 e41dd8658e7ece2ded71ee640962ac2a 348 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 310 6.1E-99 T 28-03-2018 IPR005262 Conserved hypothetical protein CHP00661 AL549_RS23645 e41dd8658e7ece2ded71ee640962ac2a 348 Pfam PF13528 Glycosyl transferase family 1 1 300 3.8E-44 T 28-03-2018 AL549_RS16315 82fb23314a8e5b743f3e9709ddf887c0 331 Gene3D G3DSA:3.40.50.720 117 301 2.2E-50 T 28-03-2018 AL549_RS16315 82fb23314a8e5b743f3e9709ddf887c0 331 SUPERFAMILY SSF52283 1 136 6.8E-42 T 28-03-2018 AL549_RS16315 82fb23314a8e5b743f3e9709ddf887c0 331 SUPERFAMILY SSF51735 103 299 1.17E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS16315 82fb23314a8e5b743f3e9709ddf887c0 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL549_RS16315 82fb23314a8e5b743f3e9709ddf887c0 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AL549_RS16315 82fb23314a8e5b743f3e9709ddf887c0 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL549_RS16315 82fb23314a8e5b743f3e9709ddf887c0 331 Gene3D G3DSA:3.40.50.720 2 116 1.1E-25 T 28-03-2018 AL549_RS16315 82fb23314a8e5b743f3e9709ddf887c0 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 328 2.6E-34 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AL549_RS16315 82fb23314a8e5b743f3e9709ddf887c0 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 6.3E-51 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL549_RS08655 733af52926620083e2449771ebed63f5 167 Gene3D G3DSA:1.10.3760.10 50 162 8.2E-40 T 28-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AL549_RS08655 733af52926620083e2449771ebed63f5 167 SUPERFAMILY SSF101307 8 160 2.49E-47 T 28-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AL549_RS08655 733af52926620083e2449771ebed63f5 167 Pfam PF04608 Phosphatidylglycerophosphatase A 15 159 2.5E-51 T 28-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AL549_RS08655 733af52926620083e2449771ebed63f5 167 PIRSF PIRSF006162 5 166 4.4E-52 T 28-03-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AL549_RS03195 685e2b5522ceca89e3215905f5c8413d 260 SUPERFAMILY SSF55781 74 256 4.25E-50 T 28-03-2018 IPR029016 GAF domain-like AL549_RS03195 685e2b5522ceca89e3215905f5c8413d 260 SMART SM00346 10 99 1.6E-28 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL549_RS03195 685e2b5522ceca89e3215905f5c8413d 260 Pfam PF01614 Bacterial transcriptional regulator 126 251 9.6E-39 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL549_RS03195 685e2b5522ceca89e3215905f5c8413d 260 Gene3D G3DSA:3.30.450.40 98 260 3.3E-46 T 28-03-2018 IPR029016 GAF domain-like AL549_RS03195 685e2b5522ceca89e3215905f5c8413d 260 Pfam PF09339 IclR helix-turn-helix domain 12 62 1.0E-13 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL549_RS03195 685e2b5522ceca89e3215905f5c8413d 260 SUPERFAMILY SSF46785 10 81 5.64E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03195 685e2b5522ceca89e3215905f5c8413d 260 Gene3D G3DSA:1.10.10.10 3 97 1.1E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS09610 43704d4d1715d0ddbeeddb4cd9a06a37 270 SUPERFAMILY SSF52540 1 268 1.03E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS09610 43704d4d1715d0ddbeeddb4cd9a06a37 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.5E-109 T 28-03-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 AL549_RS09610 43704d4d1715d0ddbeeddb4cd9a06a37 270 Pfam PF13614 AAA domain 3 159 8.4E-20 T 28-03-2018 IPR025669 AAA domain AL549_RS09610 43704d4d1715d0ddbeeddb4cd9a06a37 270 PIRSF PIRSF003092 1 270 2.3E-94 T 28-03-2018 IPR025501 ATP binding protein MinD AL549_RS09610 43704d4d1715d0ddbeeddb4cd9a06a37 270 Gene3D G3DSA:3.40.50.300 1 257 1.3E-53 T 28-03-2018 AL549_RS05990 3321e1535750a99582d73f6f5de2a920 434 SUPERFAMILY SSF53613 338 417 7.89E-45 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS05990 3321e1535750a99582d73f6f5de2a920 434 SUPERFAMILY SSF53613 34 305 7.89E-45 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS05990 3321e1535750a99582d73f6f5de2a920 434 Pfam PF00294 pfkB family carbohydrate kinase 139 294 2.1E-11 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AL549_RS05990 3321e1535750a99582d73f6f5de2a920 434 Gene3D G3DSA:3.40.1190.20 32 431 3.4E-44 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS08870 ceec95278a26740c99a9343278d00dbf 291 SUPERFAMILY SSF56176 201 282 2.64E-23 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL549_RS08870 ceec95278a26740c99a9343278d00dbf 291 SUPERFAMILY SSF54631 57 199 1.95E-33 T 28-03-2018 AL549_RS08870 ceec95278a26740c99a9343278d00dbf 291 Gene3D G3DSA:3.10.580.10 48 197 3.2E-35 T 28-03-2018 AL549_RS08870 ceec95278a26740c99a9343278d00dbf 291 Gene3D G3DSA:3.30.465.10 198 280 5.2E-27 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL549_RS08870 ceec95278a26740c99a9343278d00dbf 291 SMART SM00116 76 125 0.19 T 28-03-2018 IPR000644 CBS domain AL549_RS08870 ceec95278a26740c99a9343278d00dbf 291 SMART SM00116 139 187 0.025 T 28-03-2018 IPR000644 CBS domain AL549_RS08870 ceec95278a26740c99a9343278d00dbf 291 Pfam PF03471 Transporter associated domain 204 279 8.5E-22 T 28-03-2018 IPR005170 Transporter-associated domain AL549_RS08870 ceec95278a26740c99a9343278d00dbf 291 Pfam PF00571 CBS domain 67 124 2.3E-7 T 28-03-2018 IPR000644 CBS domain AL549_RS08870 ceec95278a26740c99a9343278d00dbf 291 Pfam PF00571 CBS domain 137 187 2.5E-6 T 28-03-2018 IPR000644 CBS domain AL549_RS08870 ceec95278a26740c99a9343278d00dbf 291 SMART SM01091 203 281 3.6E-30 T 28-03-2018 IPR005170 Transporter-associated domain AL549_RS03905 8a96d353353022f1dc9f3ff42ddd1336 149 Pfam PF01037 Lrp/AsnC ligand binding domain 76 140 5.6E-11 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL549_RS03905 8a96d353353022f1dc9f3ff42ddd1336 149 SUPERFAMILY SSF54909 76 146 1.74E-12 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL549_RS03905 8a96d353353022f1dc9f3ff42ddd1336 149 SUPERFAMILY SSF46785 1 58 5.31E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03905 8a96d353353022f1dc9f3ff42ddd1336 149 Gene3D G3DSA:3.30.70.920 54 149 5.3E-15 T 28-03-2018 AL549_RS03905 8a96d353353022f1dc9f3ff42ddd1336 149 SMART SM00344 1 111 3.2E-21 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL549_RS03905 8a96d353353022f1dc9f3ff42ddd1336 149 Gene3D G3DSA:1.10.10.10 1 52 4.8E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03905 8a96d353353022f1dc9f3ff42ddd1336 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL549_RS03905 8a96d353353022f1dc9f3ff42ddd1336 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.5E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS03905 8a96d353353022f1dc9f3ff42ddd1336 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.5E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS03905 8a96d353353022f1dc9f3ff42ddd1336 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.5E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS03905 8a96d353353022f1dc9f3ff42ddd1336 149 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 2.9E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS16790 3a2d9a5891306cbb6cb84aba006776d4 644 SUPERFAMILY SSF52540 236 368 6.12E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16790 3a2d9a5891306cbb6cb84aba006776d4 644 SUPERFAMILY SSF52540 73 156 6.12E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16790 3a2d9a5891306cbb6cb84aba006776d4 644 SMART SM00763 19 380 8.1E-217 T 28-03-2018 IPR013153 PrkA AAA domain AL549_RS16790 3a2d9a5891306cbb6cb84aba006776d4 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 4.5E-73 T 28-03-2018 IPR010650 PrkA C-terminal domain AL549_RS16790 3a2d9a5891306cbb6cb84aba006776d4 644 Gene3D G3DSA:3.40.50.300 62 368 9.7E-11 T 28-03-2018 AL549_RS16790 3a2d9a5891306cbb6cb84aba006776d4 644 Pfam PF08298 PrkA AAA domain 19 380 4.2E-175 T 28-03-2018 IPR013153 PrkA AAA domain AL549_RS16790 3a2d9a5891306cbb6cb84aba006776d4 644 PIRSF PIRSF000549 1 644 8.9E-288 T 28-03-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 AL549_RS11645 e033f146e2b48aa636f3a5154d177d63 781 Pfam PF04408 Helicase associated domain (HA2) 373 444 3.6E-5 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 AL549_RS11645 e033f146e2b48aa636f3a5154d177d63 781 SMART SM00847 372 460 0.0083 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 AL549_RS11645 e033f146e2b48aa636f3a5154d177d63 781 SMART SM00490 219 315 2.7E-14 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS11645 e033f146e2b48aa636f3a5154d177d63 781 SMART SM00487 1 174 1.8E-13 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS11645 e033f146e2b48aa636f3a5154d177d63 781 Pfam PF00270 DEAD/DEAH box helicase 13 153 1.1E-8 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL549_RS11645 e033f146e2b48aa636f3a5154d177d63 781 Pfam PF00271 Helicase conserved C-terminal domain 195 314 1.1E-14 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS11645 e033f146e2b48aa636f3a5154d177d63 781 Gene3D G3DSA:3.40.50.300 3 151 2.3E-21 T 28-03-2018 AL549_RS11645 e033f146e2b48aa636f3a5154d177d63 781 SUPERFAMILY SSF52540 18 326 2.11E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11645 e033f146e2b48aa636f3a5154d177d63 781 Gene3D G3DSA:3.40.50.300 168 333 3.5E-38 T 28-03-2018 AL549_RS06225 3389738fe1ec7cce06b64b39143d9cef 440 Pfam PF13186 Iron-sulfur cluster-binding domain 303 363 1.5E-8 T 28-03-2018 IPR023885 4Fe4S-binding SPASM domain AL549_RS06225 3389738fe1ec7cce06b64b39143d9cef 440 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 18 408 1.4E-147 T 28-03-2018 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 AL549_RS06225 3389738fe1ec7cce06b64b39143d9cef 440 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 252 323 1.0E-6 T 28-03-2018 AL549_RS06225 3389738fe1ec7cce06b64b39143d9cef 440 Pfam PF04055 Radical SAM superfamily 24 196 3.4E-11 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS06225 3389738fe1ec7cce06b64b39143d9cef 440 Gene3D G3DSA:3.20.20.70 8 368 2.8E-33 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS06225 3389738fe1ec7cce06b64b39143d9cef 440 SUPERFAMILY SSF102114 255 372 7.19E-38 T 28-03-2018 AL549_RS06225 3389738fe1ec7cce06b64b39143d9cef 440 SUPERFAMILY SSF102114 24 227 7.19E-38 T 28-03-2018 AL549_RS06225 3389738fe1ec7cce06b64b39143d9cef 440 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 302 391 5.5E-18 T 28-03-2018 IPR023885 4Fe4S-binding SPASM domain AL549_RS00895 a7c426b19279c29181786b63b94a1217 261 SMART SM00062 33 250 0.0012 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS00895 a7c426b19279c29181786b63b94a1217 261 SUPERFAMILY SSF53850 34 244 1.09E-30 T 28-03-2018 AL549_RS00895 a7c426b19279c29181786b63b94a1217 261 Gene3D G3DSA:3.40.190.10 155 260 2.2E-4 T 28-03-2018 AL549_RS00895 a7c426b19279c29181786b63b94a1217 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 244 1.5E-18 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS00895 a7c426b19279c29181786b63b94a1217 261 Gene3D G3DSA:3.40.190.10 29 154 7.4E-14 T 28-03-2018 AL549_RS00620 f2ce22a13e50b9832da0162f574ec3e0 249 SMART SM00481 5 79 1.3E-6 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL549_RS00620 f2ce22a13e50b9832da0162f574ec3e0 249 SUPERFAMILY SSF89550 4 243 9.55E-60 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL549_RS00620 f2ce22a13e50b9832da0162f574ec3e0 249 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 53.693 T 28-03-2018 IPR023710 Probable phosphatase YcdX GO:0008270 AL549_RS00620 f2ce22a13e50b9832da0162f574ec3e0 249 Gene3D G3DSA:3.20.20.140 3 247 3.2E-31 T 28-03-2018 AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 Pfam PF14684 Tricorn protease C1 domain 711 778 2.0E-25 T 28-03-2018 IPR028204 Tricorn protease C1 domain AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 SUPERFAMILY SSF52096 708 787 1.23E-59 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 SUPERFAMILY SSF52096 875 1085 1.23E-59 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 Pfam PF07676 WD40-like Beta Propeller Repeat 229 264 3.3E-6 T 28-03-2018 IPR011659 WD40-like Beta Propeller AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 Pfam PF07676 WD40-like Beta Propeller Repeat 517 548 2.8E-8 T 28-03-2018 IPR011659 WD40-like Beta Propeller AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 Pfam PF07676 WD40-like Beta Propeller Repeat 73 105 7.1E-7 T 28-03-2018 IPR011659 WD40-like Beta Propeller AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 Pfam PF07676 WD40-like Beta Propeller Repeat 370 404 1.1E-6 T 28-03-2018 IPR011659 WD40-like Beta Propeller AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 Pfam PF07676 WD40-like Beta Propeller Repeat 43 56 0.058 T 28-03-2018 IPR011659 WD40-like Beta Propeller AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 Gene3D G3DSA:2.30.42.10 796 892 9.8E-11 T 28-03-2018 AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 PIRSF PIRSF036421 28 1088 1.2E-202 T 28-03-2018 IPR012393 Tricorn protease GO:0008236 AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 SMART SM00228 789 862 1.1E-4 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 SUPERFAMILY SSF50156 793 871 5.78E-14 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 Gene3D G3DSA:3.30.750.44 711 778 2.3E-18 T 28-03-2018 AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 SMART SM00245 864 1059 2.5E-4 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 SUPERFAMILY SSF82171 157 544 3.53E-32 T 28-03-2018 AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 SUPERFAMILY SSF69304 42 306 9.55E-36 T 28-03-2018 AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 Pfam PF14685 Tricorn protease PDZ domain 822 863 3.2E-6 T 28-03-2018 IPR029414 Tricorn protease, PDZ domain AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 Gene3D G3DSA:2.120.10.30 311 490 1.9E-13 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 Gene3D G3DSA:2.130.10.150 199 310 1.0E-8 T 28-03-2018 AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 Gene3D G3DSA:2.130.10.150 491 696 4.9E-13 T 28-03-2018 AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 Gene3D G3DSA:3.90.226.10 893 1088 6.7E-26 T 28-03-2018 AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 Pfam PF03572 Peptidase family S41 903 1057 7.2E-20 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL549_RS00355 fba86db9d652ffbafbe6184cd02bccb0 1088 Gene3D G3DSA:2.140.10.30 9 195 6.2E-25 T 28-03-2018 AL549_RS00130 f52b32167f8ca01dd0377ba2ca8b684a 277 Gene3D G3DSA:3.40.50.300 4 211 4.9E-7 T 28-03-2018 AL549_RS00130 f52b32167f8ca01dd0377ba2ca8b684a 277 SUPERFAMILY SSF52540 17 145 2.29E-8 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS00130 f52b32167f8ca01dd0377ba2ca8b684a 277 Pfam PF10364 Putative capsular polysaccharide synthesis protein 121 257 9.0E-62 T 28-03-2018 IPR018831 Uncharacterised protein family NKWYS AL549_RS20140 b0c692d0c98357d72c61946582e3b5bb 403 Gene3D G3DSA:3.90.1260.10 168 358 1.6E-81 T 28-03-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL549_RS20140 b0c692d0c98357d72c61946582e3b5bb 403 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 52.007 T 28-03-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL549_RS20140 b0c692d0c98357d72c61946582e3b5bb 403 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 28-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL549_RS20140 b0c692d0c98357d72c61946582e3b5bb 403 SUPERFAMILY SSF69864 177 402 4.05E-87 T 28-03-2018 AL549_RS20140 b0c692d0c98357d72c61946582e3b5bb 403 Gene3D G3DSA:1.20.5.470 369 400 1.7E-13 T 28-03-2018 AL549_RS20140 b0c692d0c98357d72c61946582e3b5bb 403 Gene3D G3DSA:3.40.50.620 3 167 9.7E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS20140 b0c692d0c98357d72c61946582e3b5bb 403 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 28-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL549_RS20140 b0c692d0c98357d72c61946582e3b5bb 403 SUPERFAMILY SSF52402 7 170 2.43E-47 T 28-03-2018 AL549_RS20140 b0c692d0c98357d72c61946582e3b5bb 403 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 7.7E-137 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL549_RS20140 b0c692d0c98357d72c61946582e3b5bb 403 Pfam PF00764 Arginosuccinate synthase 10 396 1.0E-145 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL549_RS16230 a0e8637c77cd5188242631059fa62da6 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 2.6E-174 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS16230 a0e8637c77cd5188242631059fa62da6 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS16230 a0e8637c77cd5188242631059fa62da6 398 Pfam PF00871 Acetokinase family 5 390 4.5E-169 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS16230 a0e8637c77cd5188242631059fa62da6 398 Gene3D G3DSA:3.30.420.40 4 194 6.4E-72 T 28-03-2018 AL549_RS16230 a0e8637c77cd5188242631059fa62da6 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 191.208 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS16230 a0e8637c77cd5188242631059fa62da6 398 SUPERFAMILY SSF53067 155 395 4.58E-86 T 28-03-2018 AL549_RS16230 a0e8637c77cd5188242631059fa62da6 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS16230 a0e8637c77cd5188242631059fa62da6 398 Gene3D G3DSA:3.30.420.40 195 397 2.6E-80 T 28-03-2018 AL549_RS16230 a0e8637c77cd5188242631059fa62da6 398 PRINTS PR00471 Acetate kinase family signature 172 185 2.5E-45 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS16230 a0e8637c77cd5188242631059fa62da6 398 PRINTS PR00471 Acetate kinase family signature 377 389 2.5E-45 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS16230 a0e8637c77cd5188242631059fa62da6 398 PRINTS PR00471 Acetate kinase family signature 298 311 2.5E-45 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS16230 a0e8637c77cd5188242631059fa62da6 398 PRINTS PR00471 Acetate kinase family signature 321 337 2.5E-45 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS16230 a0e8637c77cd5188242631059fa62da6 398 PRINTS PR00471 Acetate kinase family signature 202 223 2.5E-45 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS16230 a0e8637c77cd5188242631059fa62da6 398 PRINTS PR00471 Acetate kinase family signature 5 16 2.5E-45 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS16230 a0e8637c77cd5188242631059fa62da6 398 SUPERFAMILY SSF53067 3 195 2.78E-66 T 28-03-2018 AL549_RS16230 a0e8637c77cd5188242631059fa62da6 398 PIRSF PIRSF000722 1 397 4.5E-150 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS07970 4d5e7f9ffcbafe4e6e10f41683464fd2 124 PIRSF PIRSF028141 1 120 3.6E-43 T 28-03-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type AL549_RS07970 4d5e7f9ffcbafe4e6e10f41683464fd2 124 Gene3D G3DSA:2.40.10.220 1 124 7.0E-21 T 28-03-2018 AL549_RS07970 4d5e7f9ffcbafe4e6e10f41683464fd2 124 Pfam PF07238 PilZ domain 3 100 3.2E-15 T 28-03-2018 IPR009875 PilZ domain GO:0035438 AL549_RS07970 4d5e7f9ffcbafe4e6e10f41683464fd2 124 SUPERFAMILY SSF141371 1 120 2.55E-33 T 28-03-2018 AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 Gene3D G3DSA:3.40.50.2300 1009 1143 4.5E-19 T 28-03-2018 AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 Gene3D G3DSA:1.10.287.130 765 847 2.6E-11 T 28-03-2018 AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 Gene3D G3DSA:3.30.450.20 612 761 6.0E-19 T 28-03-2018 AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 Gene3D G3DSA:3.30.565.10 848 1006 3.5E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 SUPERFAMILY SSF55785 626 741 2.3E-9 T 28-03-2018 IPR000014 PAS domain AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 SMART SM00387 897 1006 4.1E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 SUPERFAMILY SSF52172 1025 1142 9.11E-20 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 SMART SM00448 1026 1139 7.3E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 1.1E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 Pfam PF12860 PAS fold 634 748 3.9E-44 T 28-03-2018 AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 9.6E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 9.6E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 9.6E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 9.6E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 Pfam PF00072 Response regulator receiver domain 1028 1139 2.1E-12 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 SUPERFAMILY SSF55874 843 1002 1.31E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 SUPERFAMILY SSF47384 774 854 2.75E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1004 8.3E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS20810 a970d8522bbdc93bcf8bac088bd832af 1143 SMART SM00388 788 853 1.2E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS18800 e8b824cf297d662dcbd74db38a413b63 789 Pfam PF00912 Transglycosylase 189 360 1.3E-59 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AL549_RS18800 e8b824cf297d662dcbd74db38a413b63 789 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 48 770 0.0 T 28-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL549_RS18800 e8b824cf297d662dcbd74db38a413b63 789 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 193 727 1.9E-154 T 28-03-2018 AL549_RS18800 e8b824cf297d662dcbd74db38a413b63 789 Gene3D G3DSA:3.40.710.10 387 780 1.1E-95 T 28-03-2018 AL549_RS18800 e8b824cf297d662dcbd74db38a413b63 789 Pfam PF14814 Bifunctional transglycosylase second domain 93 177 7.4E-26 T 28-03-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL549_RS18800 e8b824cf297d662dcbd74db38a413b63 789 Gene3D G3DSA:1.20.5.100 22 75 9.3E-14 T 28-03-2018 AL549_RS18800 e8b824cf297d662dcbd74db38a413b63 789 Gene3D G3DSA:3.30.2060.10 92 179 9.9E-27 T 28-03-2018 AL549_RS18800 e8b824cf297d662dcbd74db38a413b63 789 SUPERFAMILY SSF56601 342 364 1.3E-108 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL549_RS18800 e8b824cf297d662dcbd74db38a413b63 789 SUPERFAMILY SSF56601 392 769 1.3E-108 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL549_RS18800 e8b824cf297d662dcbd74db38a413b63 789 SUPERFAMILY SSF53955 186 382 2.81E-69 T 28-03-2018 IPR023346 Lysozyme-like domain AL549_RS18800 e8b824cf297d662dcbd74db38a413b63 789 Pfam PF00905 Penicillin binding protein transpeptidase domain 452 690 3.6E-24 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL549_RS18800 e8b824cf297d662dcbd74db38a413b63 789 Gene3D G3DSA:1.10.3810.10 192 386 1.7E-67 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AL549_RS18800 e8b824cf297d662dcbd74db38a413b63 789 PIRSF PIRSF002799 5 789 0.0 T 28-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL549_RS20175 066141edacd7b1d1b0f0dc0fb379e5b2 803 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 647 669 - T 28-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL549_RS20175 066141edacd7b1d1b0f0dc0fb379e5b2 803 SUPERFAMILY SSF53633 5 291 5.63E-58 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL549_RS20175 066141edacd7b1d1b0f0dc0fb379e5b2 803 Gene3D G3DSA:3.40.1160.10 2 278 8.5E-48 T 28-03-2018 AL549_RS20175 066141edacd7b1d1b0f0dc0fb379e5b2 803 SUPERFAMILY SSF55347 601 784 5.23E-45 T 28-03-2018 AL549_RS20175 066141edacd7b1d1b0f0dc0fb379e5b2 803 Pfam PF00742 Homoserine dehydrogenase 601 796 1.2E-42 T 28-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL549_RS20175 066141edacd7b1d1b0f0dc0fb379e5b2 803 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 4.9E-65 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS20175 066141edacd7b1d1b0f0dc0fb379e5b2 803 Gene3D G3DSA:3.30.360.10 623 780 2.4E-51 T 28-03-2018 AL549_RS20175 066141edacd7b1d1b0f0dc0fb379e5b2 803 Pfam PF00696 Amino acid kinase family 5 272 5.9E-43 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL549_RS20175 066141edacd7b1d1b0f0dc0fb379e5b2 803 PIRSF PIRSF000727 5 803 8.8E-300 T 28-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS20175 066141edacd7b1d1b0f0dc0fb379e5b2 803 Gene3D G3DSA:3.40.50.720 447 622 4.9E-24 T 28-03-2018 AL549_RS20175 066141edacd7b1d1b0f0dc0fb379e5b2 803 SUPERFAMILY SSF51735 448 623 1.11E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS20175 066141edacd7b1d1b0f0dc0fb379e5b2 803 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 593 4.5E-15 T 28-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AL549_RS20175 066141edacd7b1d1b0f0dc0fb379e5b2 803 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS15580 b84dee7e107e242137e2a6e768951e7d 234 Gene3D G3DSA:2.20.25.10 201 233 2.5E-8 T 28-03-2018 AL549_RS15580 b84dee7e107e242137e2a6e768951e7d 234 Pfam PF04397 LytTr DNA-binding domain 138 232 1.2E-18 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AL549_RS15580 b84dee7e107e242137e2a6e768951e7d 234 Pfam PF00072 Response regulator receiver domain 4 109 1.7E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS15580 b84dee7e107e242137e2a6e768951e7d 234 Gene3D G3DSA:3.40.50.2300 1 127 3.0E-22 T 28-03-2018 AL549_RS15580 b84dee7e107e242137e2a6e768951e7d 234 SUPERFAMILY SSF52172 1 115 9.53E-26 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS15580 b84dee7e107e242137e2a6e768951e7d 234 SMART SM00448 2 110 1.5E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS15580 b84dee7e107e242137e2a6e768951e7d 234 Gene3D G3DSA:2.40.50.40 128 196 3.0E-15 T 28-03-2018 AL549_RS15580 b84dee7e107e242137e2a6e768951e7d 234 SMART SM00850 136 233 1.0E-23 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AL549_RS00070 0a14c84846516d73c0df37561e6bf212 161 Gene3D G3DSA:3.10.129.10 4 150 2.7E-38 T 28-03-2018 AL549_RS00070 0a14c84846516d73c0df37561e6bf212 161 SUPERFAMILY SSF54637 6 154 5.61E-41 T 28-03-2018 IPR029069 HotDog domain AL549_RS00070 0a14c84846516d73c0df37561e6bf212 161 Pfam PF03061 Thioesterase superfamily 22 96 2.4E-16 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL549_RS15840 b7b2600e41b5a0a6abb99139a70a0d6b 471 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 21 471 3.3E-141 T 28-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AL549_RS15840 b7b2600e41b5a0a6abb99139a70a0d6b 471 SUPERFAMILY SSF51735 145 272 4.53E-8 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS15840 b7b2600e41b5a0a6abb99139a70a0d6b 471 Pfam PF13727 CoA-binding domain 62 245 1.1E-29 T 28-03-2018 AL549_RS15840 b7b2600e41b5a0a6abb99139a70a0d6b 471 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 22 471 2.1E-157 T 28-03-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 AL549_RS15840 b7b2600e41b5a0a6abb99139a70a0d6b 471 Pfam PF02397 Bacterial sugar transferase 281 463 1.9E-64 T 28-03-2018 IPR003362 Bacterial sugar transferase AL549_RS15840 b7b2600e41b5a0a6abb99139a70a0d6b 471 Gene3D G3DSA:3.40.50.720 144 269 3.0E-14 T 28-03-2018 AL549_RS23675 655f3813d826f369db301e23d8f748f7 220 Gene3D G3DSA:1.10.10.10 1 64 1.4E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS23675 655f3813d826f369db301e23d8f748f7 220 SUPERFAMILY SSF46785 2 78 1.16E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS23675 655f3813d826f369db301e23d8f748f7 220 Pfam PF07729 FCD domain 78 207 5.8E-14 T 28-03-2018 IPR011711 GntR, C-terminal AL549_RS23675 655f3813d826f369db301e23d8f748f7 220 SMART SM00345 10 68 1.5E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS23675 655f3813d826f369db301e23d8f748f7 220 SUPERFAMILY SSF48008 74 215 4.45E-15 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL549_RS23675 655f3813d826f369db301e23d8f748f7 220 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 1.8E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS23675 655f3813d826f369db301e23d8f748f7 220 SMART SM00895 78 208 5.3E-7 T 28-03-2018 IPR011711 GntR, C-terminal AL549_RS23675 655f3813d826f369db301e23d8f748f7 220 Gene3D G3DSA:1.20.120.530 65 220 1.2E-20 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL549_RS13875 f99618cbeb3b982614c50482e28e3650 171 SUPERFAMILY SSF55729 2 150 2.17E-33 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS13875 f99618cbeb3b982614c50482e28e3650 171 Pfam PF13302 Acetyltransferase (GNAT) domain 9 147 4.3E-26 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS13875 f99618cbeb3b982614c50482e28e3650 171 Gene3D G3DSA:3.40.630.30 1 170 8.4E-19 T 28-03-2018 AL549_RS09995 ef7b66eb6862301c33fe522632c64268 112 SUPERFAMILY SSF158757 15 91 8.76E-36 T 28-03-2018 IPR023163 SMc04008-like domain AL549_RS09995 ef7b66eb6862301c33fe522632c64268 112 Gene3D G3DSA:1.10.3340.10 16 98 4.7E-39 T 28-03-2018 IPR023163 SMc04008-like domain AL549_RS09995 ef7b66eb6862301c33fe522632c64268 112 Pfam PF06844 Protein of unknown function (DUF1244) 42 108 3.2E-35 T 28-03-2018 IPR023163 SMc04008-like domain AL549_RS22770 7845066333ff91fd38789331674b0d03 344 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 304 1.2E-15 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AL549_RS22770 7845066333ff91fd38789331674b0d03 344 Gene3D G3DSA:3.40.50.2000 1 150 1.9E-32 T 28-03-2018 AL549_RS22770 7845066333ff91fd38789331674b0d03 344 SUPERFAMILY SSF53756 2 330 3.45E-66 T 28-03-2018 AL549_RS22770 7845066333ff91fd38789331674b0d03 344 Gene3D G3DSA:3.40.50.2000 168 343 4.5E-24 T 28-03-2018 AL549_RS15615 75732e1ea45d8624fe5d8d14eabcb98f 1310 Pfam PF04408 Helicase associated domain (HA2) 478 569 2.0E-19 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 AL549_RS15615 75732e1ea45d8624fe5d8d14eabcb98f 1310 Pfam PF11898 Domain of unknown function (DUF3418) 724 1308 5.1E-232 T 28-03-2018 IPR024590 RNA helicase HrpA, C-terminal AL549_RS15615 75732e1ea45d8624fe5d8d14eabcb98f 1310 Pfam PF00270 DEAD/DEAH box helicase 101 246 2.4E-7 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL549_RS15615 75732e1ea45d8624fe5d8d14eabcb98f 1310 Gene3D G3DSA:3.40.50.300 266 436 2.3E-45 T 28-03-2018 AL549_RS15615 75732e1ea45d8624fe5d8d14eabcb98f 1310 SMART SM00847 476 571 7.8E-39 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 AL549_RS15615 75732e1ea45d8624fe5d8d14eabcb98f 1310 SMART SM00487 85 272 1.9E-29 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS15615 75732e1ea45d8624fe5d8d14eabcb98f 1310 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 27 1308 0.0 T 28-03-2018 IPR010222 RNA helicase HrpA GO:0004004 AL549_RS15615 75732e1ea45d8624fe5d8d14eabcb98f 1310 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 634 710 4.8E-22 T 28-03-2018 IPR011709 Domain of unknown function DUF1605 AL549_RS15615 75732e1ea45d8624fe5d8d14eabcb98f 1310 SMART SM00382 105 396 3.8E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS15615 75732e1ea45d8624fe5d8d14eabcb98f 1310 SUPERFAMILY SSF52540 87 613 3.43E-115 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS15615 75732e1ea45d8624fe5d8d14eabcb98f 1310 SMART SM00490 316 416 7.2E-15 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS15615 75732e1ea45d8624fe5d8d14eabcb98f 1310 Gene3D G3DSA:3.40.50.300 89 248 2.7E-31 T 28-03-2018 AL549_RS15615 75732e1ea45d8624fe5d8d14eabcb98f 1310 Pfam PF00271 Helicase conserved C-terminal domain 302 415 3.1E-11 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS03280 75e2bc6be4a88ecc8c092afc4c436690 687 PIRSF PIRSF036917 1 685 0.0 T 28-03-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 AL549_RS03280 75e2bc6be4a88ecc8c092afc4c436690 687 Gene3D G3DSA:3.20.20.80 194 651 3.6E-87 T 28-03-2018 AL549_RS03280 75e2bc6be4a88ecc8c092afc4c436690 687 Pfam PF00128 Alpha amylase, catalytic domain 236 606 2.9E-53 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS03280 75e2bc6be4a88ecc8c092afc4c436690 687 SMART SM00642 203 646 2.4E-95 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS03280 75e2bc6be4a88ecc8c092afc4c436690 687 SUPERFAMILY SSF51445 189 654 1.74E-97 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS03280 75e2bc6be4a88ecc8c092afc4c436690 687 Gene3D G3DSA:2.60.40.1180 652 684 0.27 T 28-03-2018 AL549_RS03280 75e2bc6be4a88ecc8c092afc4c436690 687 Gene3D G3DSA:2.60.40.1180 92 181 0.0043 T 28-03-2018 AL549_RS22760 2b2776cc4d7ad26df027968a8da134da 658 Pfam PF00884 Sulfatase 282 572 2.4E-21 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL549_RS22760 2b2776cc4d7ad26df027968a8da134da 658 SUPERFAMILY SSF53649 280 651 4.36E-25 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS22760 2b2776cc4d7ad26df027968a8da134da 658 Gene3D G3DSA:3.40.720.10 275 573 7.2E-23 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS12010 d4121b91520af0bbcab5a88ff3b03538 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 366 510 1.8E-44 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS12010 d4121b91520af0bbcab5a88ff3b03538 545 SMART SM00304 214 268 1.0E-15 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS12010 d4121b91520af0bbcab5a88ff3b03538 545 SMART SM00304 303 370 42.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS12010 d4121b91520af0bbcab5a88ff3b03538 545 SMART SM00283 283 544 1.9E-76 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS12010 d4121b91520af0bbcab5a88ff3b03538 545 Pfam PF00672 HAMP domain 215 264 6.2E-12 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS12010 d4121b91520af0bbcab5a88ff3b03538 545 SUPERFAMILY SSF58104 236 544 7.06E-79 T 28-03-2018 AL549_RS12010 d4121b91520af0bbcab5a88ff3b03538 545 Gene3D G3DSA:1.10.287.950 318 545 3.9E-54 T 28-03-2018 AL549_RS12010 d4121b91520af0bbcab5a88ff3b03538 545 Gene3D G3DSA:1.10.287.950 60 317 1.2E-5 T 28-03-2018 AL549_RS21265 0f1a197e72f00790d77e9f32a6ce6592 407 SUPERFAMILY SSF141868 4 198 4.71E-28 T 28-03-2018 IPR001633 EAL domain AL549_RS21265 0f1a197e72f00790d77e9f32a6ce6592 407 Gene3D G3DSA:3.20.20.450 2 198 9.5E-20 T 28-03-2018 IPR001633 EAL domain AL549_RS21265 0f1a197e72f00790d77e9f32a6ce6592 407 Gene3D G3DSA:1.10.3210.10 199 402 2.0E-17 T 28-03-2018 AL549_RS21265 0f1a197e72f00790d77e9f32a6ce6592 407 Pfam PF00563 EAL domain 75 194 6.9E-12 T 28-03-2018 IPR001633 EAL domain AL549_RS21265 0f1a197e72f00790d77e9f32a6ce6592 407 SMART SM00052 2 199 3.7E-4 T 28-03-2018 IPR001633 EAL domain AL549_RS21265 0f1a197e72f00790d77e9f32a6ce6592 407 SUPERFAMILY SSF109604 185 404 1.1E-41 T 28-03-2018 AL549_RS21265 0f1a197e72f00790d77e9f32a6ce6592 407 PIRSF PIRSF003180 1 407 8.0E-172 T 28-03-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AL549_RS21265 0f1a197e72f00790d77e9f32a6ce6592 407 Pfam PF08668 HDOD domain 207 324 1.0E-13 T 28-03-2018 IPR013976 Metal-dependent hydrolase HDOD AL549_RS07900 a83a569dbcfae7dba31f860c5584c37f 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 3.0E-18 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL549_RS07900 a83a569dbcfae7dba31f860c5584c37f 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 3.0E-18 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL549_RS07900 a83a569dbcfae7dba31f860c5584c37f 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 3.0E-18 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL549_RS07900 a83a569dbcfae7dba31f860c5584c37f 168 Pfam PF01252 Signal peptidase (SPase) II 19 161 3.9E-38 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL549_RS07900 a83a569dbcfae7dba31f860c5584c37f 168 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL549_RS07900 a83a569dbcfae7dba31f860c5584c37f 168 TIGRFAM TIGR00077 lspA: signal peptidase II 6 167 8.1E-49 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL549_RS07900 a83a569dbcfae7dba31f860c5584c37f 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 16.785 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL549_RS08290 c832dc0b66d854aacb73813c2c5dd754 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 9.5E-44 T 28-03-2018 AL549_RS08290 c832dc0b66d854aacb73813c2c5dd754 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.524 T 28-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AL549_RS08290 c832dc0b66d854aacb73813c2c5dd754 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 5.1E-157 T 28-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AL549_RS08290 c832dc0b66d854aacb73813c2c5dd754 422 Pfam PF03129 Anticodon binding domain 329 420 8.9E-11 T 28-03-2018 IPR004154 Anticodon-binding AL549_RS08290 c832dc0b66d854aacb73813c2c5dd754 422 Gene3D G3DSA:3.30.930.10 2 324 1.9E-72 T 28-03-2018 AL549_RS08290 c832dc0b66d854aacb73813c2c5dd754 422 SUPERFAMILY SSF52954 327 422 1.8E-26 T 28-03-2018 IPR004154 Anticodon-binding AL549_RS08290 c832dc0b66d854aacb73813c2c5dd754 422 PIRSF PIRSF001549 2 422 8.9E-125 T 28-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AL549_RS08290 c832dc0b66d854aacb73813c2c5dd754 422 Gene3D G3DSA:3.40.50.800 325 422 7.6E-17 T 28-03-2018 IPR004154 Anticodon-binding AL549_RS08290 c832dc0b66d854aacb73813c2c5dd754 422 SUPERFAMILY SSF55681 5 320 9.36E-105 T 28-03-2018 AL549_RS02450 ed4e092574c5f5174da295b2ea62de25 412 Pfam PF00271 Helicase conserved C-terminal domain 223 331 5.7E-26 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS02450 ed4e092574c5f5174da295b2ea62de25 412 Pfam PF00270 DEAD/DEAH box helicase 24 185 3.9E-47 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL549_RS02450 ed4e092574c5f5174da295b2ea62de25 412 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 145 153 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL549_RS02450 ed4e092574c5f5174da295b2ea62de25 412 SUPERFAMILY SSF52540 68 348 3.37E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS02450 ed4e092574c5f5174da295b2ea62de25 412 SMART SM00487 19 212 9.6E-49 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS02450 ed4e092574c5f5174da295b2ea62de25 412 Gene3D G3DSA:3.40.50.300 4 213 2.4E-61 T 28-03-2018 AL549_RS02450 ed4e092574c5f5174da295b2ea62de25 412 SMART SM00490 250 331 2.4E-29 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS02450 ed4e092574c5f5174da295b2ea62de25 412 Gene3D G3DSA:3.40.50.300 214 412 1.1E-42 T 28-03-2018 AL549_RS00860 d935fd02b04db7c77e26fe5a6829c9d7 429 SMART SM00388 210 275 1.1E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS00860 d935fd02b04db7c77e26fe5a6829c9d7 429 SMART SM00304 157 209 8.2E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS00860 d935fd02b04db7c77e26fe5a6829c9d7 429 Gene3D G3DSA:3.30.565.10 280 429 4.2E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS00860 d935fd02b04db7c77e26fe5a6829c9d7 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 1.3E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS00860 d935fd02b04db7c77e26fe5a6829c9d7 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 1.3E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS00860 d935fd02b04db7c77e26fe5a6829c9d7 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 1.3E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS00860 d935fd02b04db7c77e26fe5a6829c9d7 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 1.3E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS00860 d935fd02b04db7c77e26fe5a6829c9d7 429 Gene3D G3DSA:1.10.287.130 200 271 3.0E-10 T 28-03-2018 AL549_RS00860 d935fd02b04db7c77e26fe5a6829c9d7 429 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 274 6.6E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS00860 d935fd02b04db7c77e26fe5a6829c9d7 429 SUPERFAMILY SSF47384 194 275 2.55E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS00860 d935fd02b04db7c77e26fe5a6829c9d7 429 SUPERFAMILY SSF55874 265 425 2.23E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS00860 d935fd02b04db7c77e26fe5a6829c9d7 429 Pfam PF00672 HAMP domain 159 204 2.5E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS00860 d935fd02b04db7c77e26fe5a6829c9d7 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 426 8.2E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS00860 d935fd02b04db7c77e26fe5a6829c9d7 429 SMART SM00387 318 428 1.1E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS00860 d935fd02b04db7c77e26fe5a6829c9d7 429 SUPERFAMILY SSF158472 158 208 9.94E-5 T 28-03-2018 AL549_RS07720 47f1cb75d2ea85613abcfa8f6662dc89 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 1.8E-13 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AL549_RS07720 47f1cb75d2ea85613abcfa8f6662dc89 318 Pfam PF08544 GHMP kinases C terminal 218 292 1.2E-9 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AL549_RS07720 47f1cb75d2ea85613abcfa8f6662dc89 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 313 1.2E-108 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AL549_RS07720 47f1cb75d2ea85613abcfa8f6662dc89 318 Hamap MF_00384 Homoserine kinase [thrB]. 3 313 30.078 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AL549_RS07720 47f1cb75d2ea85613abcfa8f6662dc89 318 PRINTS PR00958 Homoserine kinase signature 181 198 2.1E-31 T 28-03-2018 AL549_RS07720 47f1cb75d2ea85613abcfa8f6662dc89 318 PRINTS PR00958 Homoserine kinase signature 103 118 2.1E-31 T 28-03-2018 AL549_RS07720 47f1cb75d2ea85613abcfa8f6662dc89 318 PRINTS PR00958 Homoserine kinase signature 10 25 2.1E-31 T 28-03-2018 AL549_RS07720 47f1cb75d2ea85613abcfa8f6662dc89 318 PRINTS PR00958 Homoserine kinase signature 143 156 2.1E-31 T 28-03-2018 AL549_RS07720 47f1cb75d2ea85613abcfa8f6662dc89 318 PRINTS PR00958 Homoserine kinase signature 260 275 2.1E-31 T 28-03-2018 AL549_RS07720 47f1cb75d2ea85613abcfa8f6662dc89 318 PIRSF PIRSF000676 1 316 1.2E-78 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AL549_RS07720 47f1cb75d2ea85613abcfa8f6662dc89 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 28-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AL549_RS07720 47f1cb75d2ea85613abcfa8f6662dc89 318 SUPERFAMILY SSF55060 178 294 1.15E-32 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AL549_RS07720 47f1cb75d2ea85613abcfa8f6662dc89 318 Gene3D G3DSA:3.30.70.890 174 305 4.2E-30 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AL549_RS07720 47f1cb75d2ea85613abcfa8f6662dc89 318 SUPERFAMILY SSF54211 3 191 6.83E-36 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS07720 47f1cb75d2ea85613abcfa8f6662dc89 318 Gene3D G3DSA:3.30.230.10 1 164 1.4E-25 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL549_RS16455 3b269f458c629d3ca685a0ad9579ed5c 139 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 8 132 1.8E-49 T 28-03-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 AL549_RS16455 3b269f458c629d3ca685a0ad9579ed5c 139 SUPERFAMILY SSF54637 6 134 1.83E-40 T 28-03-2018 IPR029069 HotDog domain AL549_RS16455 3b269f458c629d3ca685a0ad9579ed5c 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 11 127 9.3E-38 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AL549_RS16455 3b269f458c629d3ca685a0ad9579ed5c 139 Gene3D G3DSA:3.10.129.10 3 137 3.5E-38 T 28-03-2018 AL549_RS16455 3b269f458c629d3ca685a0ad9579ed5c 139 Pfam PF03061 Thioesterase superfamily 22 107 5.9E-17 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL549_RS16455 3b269f458c629d3ca685a0ad9579ed5c 139 PIRSF PIRSF003230 2 138 1.0E-46 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AL549_RS04520 c0cb4ba0528f94ca5d5df952dffe0fbc 357 SUPERFAMILY SSF56925 24 183 4.45E-33 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS04520 c0cb4ba0528f94ca5d5df952dffe0fbc 357 SUPERFAMILY SSF103088 234 344 2.49E-36 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS04520 c0cb4ba0528f94ca5d5df952dffe0fbc 357 Pfam PF00691 OmpA family 243 338 5.5E-25 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS04520 c0cb4ba0528f94ca5d5df952dffe0fbc 357 PRINTS PR01021 OMPA domain signature 274 289 6.5E-12 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS04520 c0cb4ba0528f94ca5d5df952dffe0fbc 357 PRINTS PR01021 OMPA domain signature 244 266 6.5E-12 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS04520 c0cb4ba0528f94ca5d5df952dffe0fbc 357 PRINTS PR01021 OMPA domain signature 289 305 6.5E-12 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS04520 c0cb4ba0528f94ca5d5df952dffe0fbc 357 Pfam PF01389 OmpA-like transmembrane domain 27 182 1.9E-21 T 28-03-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AL549_RS04520 c0cb4ba0528f94ca5d5df952dffe0fbc 357 ProSitePatterns PS01068 OmpA-like domain. 276 320 - T 28-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AL549_RS04520 c0cb4ba0528f94ca5d5df952dffe0fbc 357 Gene3D G3DSA:2.40.160.20 9 231 1.2E-33 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS04520 c0cb4ba0528f94ca5d5df952dffe0fbc 357 Gene3D G3DSA:3.30.1330.60 232 357 1.3E-38 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS21400 15c34c3513b54ad690e1c9e66080ae18 1048 SUPERFAMILY SSF55073 618 774 9.42E-40 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS21400 15c34c3513b54ad690e1c9e66080ae18 1048 Pfam PF13426 PAS domain 502 600 6.9E-9 T 28-03-2018 IPR000014 PAS domain AL549_RS21400 15c34c3513b54ad690e1c9e66080ae18 1048 Gene3D G3DSA:3.30.70.270 615 774 7.2E-46 T 28-03-2018 AL549_RS21400 15c34c3513b54ad690e1c9e66080ae18 1048 SUPERFAMILY SSF55785 476 599 6.6E-19 T 28-03-2018 IPR000014 PAS domain AL549_RS21400 15c34c3513b54ad690e1c9e66080ae18 1048 SUPERFAMILY SSF141868 792 1040 4.58E-68 T 28-03-2018 IPR001633 EAL domain AL549_RS21400 15c34c3513b54ad690e1c9e66080ae18 1048 Pfam PF00563 EAL domain 794 1028 1.6E-54 T 28-03-2018 IPR001633 EAL domain AL549_RS21400 15c34c3513b54ad690e1c9e66080ae18 1048 SUPERFAMILY SSF55785 354 477 3.84E-8 T 28-03-2018 IPR000014 PAS domain AL549_RS21400 15c34c3513b54ad690e1c9e66080ae18 1048 Gene3D G3DSA:3.30.450.20 352 475 9.2E-12 T 28-03-2018 AL549_RS21400 15c34c3513b54ad690e1c9e66080ae18 1048 SMART SM00091 491 556 0.0099 T 28-03-2018 IPR000014 PAS domain AL549_RS21400 15c34c3513b54ad690e1c9e66080ae18 1048 SMART SM00091 366 432 14.0 T 28-03-2018 IPR000014 PAS domain AL549_RS21400 15c34c3513b54ad690e1c9e66080ae18 1048 Pfam PF00990 Diguanylate cyclase, GGDEF domain 613 770 5.0E-35 T 28-03-2018 IPR000160 GGDEF domain AL549_RS21400 15c34c3513b54ad690e1c9e66080ae18 1048 Gene3D G3DSA:3.30.450.20 476 614 3.5E-24 T 28-03-2018 AL549_RS21400 15c34c3513b54ad690e1c9e66080ae18 1048 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 609 773 2.7E-34 T 28-03-2018 IPR000160 GGDEF domain AL549_RS21400 15c34c3513b54ad690e1c9e66080ae18 1048 SMART SM00052 786 1033 7.4E-54 T 28-03-2018 IPR001633 EAL domain AL549_RS21400 15c34c3513b54ad690e1c9e66080ae18 1048 SMART SM00267 602 774 2.3E-45 T 28-03-2018 IPR000160 GGDEF domain AL549_RS21400 15c34c3513b54ad690e1c9e66080ae18 1048 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 489 609 9.2E-15 T 28-03-2018 IPR000014 PAS domain AL549_RS21400 15c34c3513b54ad690e1c9e66080ae18 1048 Gene3D G3DSA:3.20.20.450 775 1037 5.7E-70 T 28-03-2018 IPR001633 EAL domain AL549_RS05970 380d8cb1ca944b25abceb60c1830d2e8 259 Gene3D G3DSA:3.40.50.1000 39 67 0.0028 T 28-03-2018 IPR023214 HAD-like domain AL549_RS05970 380d8cb1ca944b25abceb60c1830d2e8 259 Gene3D G3DSA:1.10.150.240 68 116 3.7E-11 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AL549_RS05970 380d8cb1ca944b25abceb60c1830d2e8 259 SUPERFAMILY SSF56784 42 255 1.87E-44 T 28-03-2018 IPR023214 HAD-like domain AL549_RS05970 380d8cb1ca944b25abceb60c1830d2e8 259 Pfam PF13419 Haloacid dehalogenase-like hydrolase 46 225 4.5E-26 T 28-03-2018 IPR023214 HAD-like domain AL549_RS05970 380d8cb1ca944b25abceb60c1830d2e8 259 Gene3D G3DSA:3.40.50.1000 117 259 3.0E-21 T 28-03-2018 IPR023214 HAD-like domain AL549_RS05970 380d8cb1ca944b25abceb60c1830d2e8 259 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 114 225 3.7E-11 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS05535 eaade0d761eebe59196ea84ff6c6eca2 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 26 41 4.7E-11 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS05535 eaade0d761eebe59196ea84ff6c6eca2 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 4.7E-11 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS05535 eaade0d761eebe59196ea84ff6c6eca2 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 73 88 4.7E-11 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS05535 eaade0d761eebe59196ea84ff6c6eca2 106 Gene3D G3DSA:1.10.10.10 4 101 7.4E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS05535 eaade0d761eebe59196ea84ff6c6eca2 106 SUPERFAMILY SSF46785 14 105 1.03E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS05535 eaade0d761eebe59196ea84ff6c6eca2 106 SMART SM00418 24 102 9.6E-18 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS05535 eaade0d761eebe59196ea84ff6c6eca2 106 Pfam PF01022 Bacterial regulatory protein, arsR family 31 76 6.6E-9 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS00885 50661338db0d4d323cd3476e7a8a75a0 683 Gene3D G3DSA:2.60.40.10 573 679 1.9E-6 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS00885 50661338db0d4d323cd3476e7a8a75a0 683 Gene3D G3DSA:3.20.20.80 51 451 1.2E-64 T 28-03-2018 AL549_RS00885 50661338db0d4d323cd3476e7a8a75a0 683 Pfam PF00128 Alpha amylase, catalytic domain 205 390 2.4E-14 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS00885 50661338db0d4d323cd3476e7a8a75a0 683 Pfam PF00128 Alpha amylase, catalytic domain 88 175 4.1E-27 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS00885 50661338db0d4d323cd3476e7a8a75a0 683 SUPERFAMILY SSF51011 459 534 2.56E-7 T 28-03-2018 AL549_RS00885 50661338db0d4d323cd3476e7a8a75a0 683 SUPERFAMILY SSF51445 51 456 1.63E-70 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS00885 50661338db0d4d323cd3476e7a8a75a0 683 SMART SM00642 62 446 9.7E-32 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS00885 50661338db0d4d323cd3476e7a8a75a0 683 Gene3D G3DSA:2.60.40.1180 452 534 4.0E-10 T 28-03-2018 AL549_RS23320 e5be2ee4dd7480dbfc52f81e4d96f2b9 234 SUPERFAMILY SSF52540 5 225 8.8E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS23320 e5be2ee4dd7480dbfc52f81e4d96f2b9 234 Pfam PF00005 ABC transporter 30 180 2.5E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS23320 e5be2ee4dd7480dbfc52f81e4d96f2b9 234 Gene3D G3DSA:3.40.50.300 6 232 1.3E-51 T 28-03-2018 AL549_RS23320 e5be2ee4dd7480dbfc52f81e4d96f2b9 234 SMART SM00382 35 228 3.0E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS04085 c64c95690062d6073d5f5775a6f09b0c 238 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 37 227 1.9E-83 T 28-03-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 AL549_RS04085 c64c95690062d6073d5f5775a6f09b0c 238 SUPERFAMILY SSF51366 14 224 4.71E-50 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL549_RS04085 c64c95690062d6073d5f5775a6f09b0c 238 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 13 227 34.515 T 28-03-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 AL549_RS04085 c64c95690062d6073d5f5775a6f09b0c 238 Gene3D G3DSA:3.20.20.70 2 234 1.7E-31 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS04470 b5b42bd0ca765bd1aff5eadab45dc5a6 568 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 487 537 3.8E-8 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS04470 b5b42bd0ca765bd1aff5eadab45dc5a6 568 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS04470 b5b42bd0ca765bd1aff5eadab45dc5a6 568 SUPERFAMILY SSF53738 301 445 3.57E-31 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS04470 b5b42bd0ca765bd1aff5eadab45dc5a6 568 Gene3D G3DSA:3.40.120.10 334 447 3.2E-35 T 28-03-2018 AL549_RS04470 b5b42bd0ca765bd1aff5eadab45dc5a6 568 Gene3D G3DSA:3.40.120.10 14 208 4.0E-62 T 28-03-2018 AL549_RS04470 b5b42bd0ca765bd1aff5eadab45dc5a6 568 SUPERFAMILY SSF53738 203 308 3.3E-21 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS04470 b5b42bd0ca765bd1aff5eadab45dc5a6 568 Gene3D G3DSA:3.40.120.10 209 333 5.4E-32 T 28-03-2018 AL549_RS04470 b5b42bd0ca765bd1aff5eadab45dc5a6 568 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 321 438 3.1E-17 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS04470 b5b42bd0ca765bd1aff5eadab45dc5a6 568 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 226 245 1.0E-7 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS04470 b5b42bd0ca765bd1aff5eadab45dc5a6 568 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 293 308 1.0E-7 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS04470 b5b42bd0ca765bd1aff5eadab45dc5a6 568 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 1.0E-7 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS04470 b5b42bd0ca765bd1aff5eadab45dc5a6 568 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 204 309 8.3E-24 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS04470 b5b42bd0ca765bd1aff5eadab45dc5a6 568 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 180 2.0E-43 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS04470 b5b42bd0ca765bd1aff5eadab45dc5a6 568 SUPERFAMILY SSF53738 30 218 3.61E-45 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS04470 b5b42bd0ca765bd1aff5eadab45dc5a6 568 SUPERFAMILY SSF55957 434 459 3.01E-14 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS04470 b5b42bd0ca765bd1aff5eadab45dc5a6 568 SUPERFAMILY SSF55957 498 541 3.01E-14 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS04470 b5b42bd0ca765bd1aff5eadab45dc5a6 568 Gene3D G3DSA:3.30.310.50 461 566 7.1E-20 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS10070 cc99ae3ed0b1cd3735344153ccb049e6 294 Pfam PF01263 Aldose 1-epimerase 27 291 4.0E-51 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AL549_RS10070 cc99ae3ed0b1cd3735344153ccb049e6 294 SUPERFAMILY SSF74650 6 288 4.4E-75 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AL549_RS10070 cc99ae3ed0b1cd3735344153ccb049e6 294 Gene3D G3DSA:2.70.98.10 7 293 9.2E-64 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL549_RS10070 cc99ae3ed0b1cd3735344153ccb049e6 294 PIRSF PIRSF016020 5 294 6.8E-62 T 28-03-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 AL549_RS03435 6787402593be33b309a4ba89f36514e7 685 Pfam PF13426 PAS domain 398 499 2.2E-12 T 28-03-2018 IPR000014 PAS domain AL549_RS03435 6787402593be33b309a4ba89f36514e7 685 Pfam PF00990 Diguanylate cyclase, GGDEF domain 512 669 5.1E-52 T 28-03-2018 IPR000160 GGDEF domain AL549_RS03435 6787402593be33b309a4ba89f36514e7 685 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 389 508 1.4E-16 T 28-03-2018 IPR000014 PAS domain AL549_RS03435 6787402593be33b309a4ba89f36514e7 685 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 259 386 3.7E-12 T 28-03-2018 IPR000014 PAS domain AL549_RS03435 6787402593be33b309a4ba89f36514e7 685 SMART SM00086 336 379 1.1E-9 T 28-03-2018 IPR001610 PAC motif AL549_RS03435 6787402593be33b309a4ba89f36514e7 685 SMART SM00086 459 501 3.4 T 28-03-2018 IPR001610 PAC motif AL549_RS03435 6787402593be33b309a4ba89f36514e7 685 Gene3D G3DSA:3.40.50.10600 386 506 8.2E-21 T 28-03-2018 AL549_RS03435 6787402593be33b309a4ba89f36514e7 685 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 508 672 5.9E-45 T 28-03-2018 IPR000160 GGDEF domain AL549_RS03435 6787402593be33b309a4ba89f36514e7 685 SMART SM00267 501 674 4.2E-69 T 28-03-2018 IPR000160 GGDEF domain AL549_RS03435 6787402593be33b309a4ba89f36514e7 685 Pfam PF08447 PAS fold 285 373 3.9E-22 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 AL549_RS03435 6787402593be33b309a4ba89f36514e7 685 SUPERFAMILY SSF55785 267 380 1.27E-21 T 28-03-2018 IPR000014 PAS domain AL549_RS03435 6787402593be33b309a4ba89f36514e7 685 SUPERFAMILY SSF55785 398 510 1.74E-22 T 28-03-2018 IPR000014 PAS domain AL549_RS03435 6787402593be33b309a4ba89f36514e7 685 SMART SM00091 260 329 0.035 T 28-03-2018 IPR000014 PAS domain AL549_RS03435 6787402593be33b309a4ba89f36514e7 685 SMART SM00091 387 456 3.4E-5 T 28-03-2018 IPR000014 PAS domain AL549_RS03435 6787402593be33b309a4ba89f36514e7 685 SUPERFAMILY SSF55073 517 676 1.96E-51 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS03435 6787402593be33b309a4ba89f36514e7 685 Gene3D G3DSA:3.30.70.270 507 677 4.9E-62 T 28-03-2018 AL549_RS03435 6787402593be33b309a4ba89f36514e7 685 Gene3D G3DSA:3.30.450.20 248 385 1.9E-27 T 28-03-2018 AL549_RS22090 998f800da9053a7070d3db89a5715219 69 SUPERFAMILY SSF54285 5 69 3.78E-15 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AL549_RS22090 998f800da9053a7070d3db89a5715219 69 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 6 69 2.1E-20 T 28-03-2018 IPR010035 ThiS, thiamine-biosynthesis AL549_RS22090 998f800da9053a7070d3db89a5715219 69 Gene3D G3DSA:3.10.20.30 4 69 4.1E-19 T 28-03-2018 IPR012675 Beta-grasp domain AL549_RS22090 998f800da9053a7070d3db89a5715219 69 Pfam PF02597 ThiS family 7 69 1.6E-13 T 28-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 AL549_RS06385 efc6ee5abf2b4d02c017a8459d8cdebb 615 Pfam PF03781 Sulfatase-modifying factor enzyme 1 394 613 2.1E-50 T 28-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AL549_RS06385 efc6ee5abf2b4d02c017a8459d8cdebb 615 Gene3D G3DSA:3.90.1580.10 378 615 3.2E-54 T 28-03-2018 AL549_RS06385 efc6ee5abf2b4d02c017a8459d8cdebb 615 Pfam PF08308 PEGA domain 307 371 1.4E-24 T 28-03-2018 IPR013229 PEGA AL549_RS06385 efc6ee5abf2b4d02c017a8459d8cdebb 615 SUPERFAMILY SSF56436 391 613 1.7E-57 T 28-03-2018 IPR016187 C-type lectin fold AL549_RS05785 1053daac33f6a7ce7284823d560ae6c6 400 Pfam PF07055 Enoyl reductase FAD binding domain 327 390 1.1E-24 T 28-03-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL549_RS05785 1053daac33f6a7ce7284823d560ae6c6 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 396 53.512 T 28-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL549_RS05785 1053daac33f6a7ce7284823d560ae6c6 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3 81 2.0E-32 T 28-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL549_RS05785 1053daac33f6a7ce7284823d560ae6c6 400 SUPERFAMILY SSF51735 109 148 4.89E-5 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS05785 1053daac33f6a7ce7284823d560ae6c6 400 SUPERFAMILY SSF51735 42 77 4.89E-5 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS05785 1053daac33f6a7ce7284823d560ae6c6 400 Gene3D G3DSA:3.40.50.720 19 222 8.5E-5 T 28-03-2018 AL549_RS05785 1053daac33f6a7ce7284823d560ae6c6 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 320 1.2E-95 T 28-03-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL549_RS10535 a0651f98f508e12599655ee311becf13 380 SUPERFAMILY SSF50621 215 361 1.15E-22 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL549_RS10535 a0651f98f508e12599655ee311becf13 380 Gene3D G3DSA:2.40.37.10 242 373 1.2E-19 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL549_RS10535 a0651f98f508e12599655ee311becf13 380 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 9 373 1.1E-164 T 28-03-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 AL549_RS10535 a0651f98f508e12599655ee311becf13 380 PIRSF PIRSF038941 1 375 3.6E-129 T 28-03-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 AL549_RS10535 a0651f98f508e12599655ee311becf13 380 SUPERFAMILY SSF51419 17 245 4.36E-42 T 28-03-2018 IPR029066 PLP-binding barrel AL549_RS10535 a0651f98f508e12599655ee311becf13 380 Gene3D G3DSA:3.20.20.10 18 241 6.2E-38 T 28-03-2018 IPR029066 PLP-binding barrel AL549_RS22580 5b1b7fddafda17a6ca387ed18d0230e7 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 276 2.7E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS22580 5b1b7fddafda17a6ca387ed18d0230e7 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 429 5.4E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS22580 5b1b7fddafda17a6ca387ed18d0230e7 432 Gene3D G3DSA:1.10.287.130 212 278 3.9E-12 T 28-03-2018 AL549_RS22580 5b1b7fddafda17a6ca387ed18d0230e7 432 SMART SM00304 169 221 1.8E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS22580 5b1b7fddafda17a6ca387ed18d0230e7 432 Pfam PF00672 HAMP domain 169 217 1.4E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS22580 5b1b7fddafda17a6ca387ed18d0230e7 432 SUPERFAMILY SSF47384 215 277 8.83E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS22580 5b1b7fddafda17a6ca387ed18d0230e7 432 Gene3D G3DSA:3.30.565.10 283 432 2.3E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS22580 5b1b7fddafda17a6ca387ed18d0230e7 432 SUPERFAMILY SSF55874 285 429 3.67E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS22580 5b1b7fddafda17a6ca387ed18d0230e7 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 7.5E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS22580 5b1b7fddafda17a6ca387ed18d0230e7 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 7.5E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS22580 5b1b7fddafda17a6ca387ed18d0230e7 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 7.5E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS22580 5b1b7fddafda17a6ca387ed18d0230e7 432 SMART SM00388 222 282 1.7E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS22580 5b1b7fddafda17a6ca387ed18d0230e7 432 SUPERFAMILY SSF158472 171 218 2.62E-5 T 28-03-2018 AL549_RS22580 5b1b7fddafda17a6ca387ed18d0230e7 432 SMART SM00387 321 431 1.9E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS23585 dc344f333fbb5b970a06292b25b56b8e 268 SUPERFAMILY SSF53335 7 264 2.39E-79 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS23585 dc344f333fbb5b970a06292b25b56b8e 268 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 6.2E-88 T 28-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AL549_RS23585 dc344f333fbb5b970a06292b25b56b8e 268 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 28-03-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AL549_RS23585 dc344f333fbb5b970a06292b25b56b8e 268 Gene3D G3DSA:1.10.8.100 209 263 8.5E-19 T 28-03-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 AL549_RS23585 dc344f333fbb5b970a06292b25b56b8e 268 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 3.2E-77 T 28-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AL549_RS23585 dc344f333fbb5b970a06292b25b56b8e 268 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.382 T 28-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AL549_RS23585 dc344f333fbb5b970a06292b25b56b8e 268 Gene3D G3DSA:3.40.50.150 2 208 8.9E-58 T 28-03-2018 AL549_RS23585 dc344f333fbb5b970a06292b25b56b8e 268 SMART SM00650 25 197 5.1E-89 T 28-03-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AL549_RS18725 aa384a4ab8490b5c20f77a4b18604abd 296 SUPERFAMILY SSF53067 1 111 3.98E-24 T 28-03-2018 AL549_RS18725 aa384a4ab8490b5c20f77a4b18604abd 296 Gene3D G3DSA:3.30.420.40 128 270 2.2E-28 T 28-03-2018 AL549_RS18725 aa384a4ab8490b5c20f77a4b18604abd 296 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 1.2E-45 T 28-03-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 AL549_RS18725 aa384a4ab8490b5c20f77a4b18604abd 296 Gene3D G3DSA:3.30.420.40 1 127 2.4E-19 T 28-03-2018 AL549_RS18725 aa384a4ab8490b5c20f77a4b18604abd 296 SUPERFAMILY SSF53067 114 283 3.33E-43 T 28-03-2018 AL549_RS10035 881123ec4a2506093b2f44be7fbdc033 657 Gene3D G3DSA:3.40.190.10 113 191 1.7E-6 T 28-03-2018 AL549_RS10035 881123ec4a2506093b2f44be7fbdc033 657 Gene3D G3DSA:3.30.70.270 502 655 8.9E-34 T 28-03-2018 AL549_RS10035 881123ec4a2506093b2f44be7fbdc033 657 SUPERFAMILY SSF53850 252 465 1.4E-25 T 28-03-2018 AL549_RS10035 881123ec4a2506093b2f44be7fbdc033 657 Gene3D G3DSA:3.40.190.10 39 112 2.1E-7 T 28-03-2018 AL549_RS10035 881123ec4a2506093b2f44be7fbdc033 657 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 505 653 1.7E-27 T 28-03-2018 IPR000160 GGDEF domain AL549_RS10035 881123ec4a2506093b2f44be7fbdc033 657 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 255 436 4.3E-21 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS10035 881123ec4a2506093b2f44be7fbdc033 657 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 185 4.9E-19 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS10035 881123ec4a2506093b2f44be7fbdc033 657 SUPERFAMILY SSF55073 513 652 1.88E-27 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS10035 881123ec4a2506093b2f44be7fbdc033 657 SUPERFAMILY SSF53850 41 209 3.7E-23 T 28-03-2018 AL549_RS10035 881123ec4a2506093b2f44be7fbdc033 657 Gene3D G3DSA:3.40.190.10 242 329 6.8E-7 T 28-03-2018 AL549_RS10035 881123ec4a2506093b2f44be7fbdc033 657 SMART SM00062 26 220 3.4E-8 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS10035 881123ec4a2506093b2f44be7fbdc033 657 Gene3D G3DSA:3.40.190.10 330 421 3.7E-11 T 28-03-2018 AL549_RS10035 881123ec4a2506093b2f44be7fbdc033 657 Pfam PF00990 Diguanylate cyclase, GGDEF domain 509 653 1.8E-26 T 28-03-2018 IPR000160 GGDEF domain AL549_RS10035 881123ec4a2506093b2f44be7fbdc033 657 SMART SM00267 497 656 5.2E-23 T 28-03-2018 IPR000160 GGDEF domain AL549_RS00605 be2b61b50ed0e28c6f13cc52e4aae6bb 157 Pfam PF12796 Ankyrin repeats (3 copies) 43 122 1.7E-10 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL549_RS00605 be2b61b50ed0e28c6f13cc52e4aae6bb 157 SMART SM00248 68 97 0.0085 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL549_RS00605 be2b61b50ed0e28c6f13cc52e4aae6bb 157 SMART SM00248 101 132 1900.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL549_RS00605 be2b61b50ed0e28c6f13cc52e4aae6bb 157 SMART SM00248 35 64 4400.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL549_RS00605 be2b61b50ed0e28c6f13cc52e4aae6bb 157 SUPERFAMILY SSF48403 39 155 3.48E-23 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL549_RS00605 be2b61b50ed0e28c6f13cc52e4aae6bb 157 Gene3D G3DSA:1.25.40.20 39 157 3.3E-23 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL549_RS00875 d7a6c076855fbe4b5f2b61fd4679786c 643 SUPERFAMILY SSF53649 279 607 5.5E-70 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS00875 d7a6c076855fbe4b5f2b61fd4679786c 643 Gene3D G3DSA:3.40.720.10 270 556 1.6E-55 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS00875 d7a6c076855fbe4b5f2b61fd4679786c 643 PIRSF PIRSF005091 7 642 3.8E-102 T 28-03-2018 IPR012160 Lipoteichoic acid synthase-like AL549_RS00875 d7a6c076855fbe4b5f2b61fd4679786c 643 Pfam PF00884 Sulfatase 281 551 1.4E-48 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL549_RS11810 b9e0d3b1abcea2029295848b4b152214 222 Gene3D G3DSA:1.20.1050.10 90 222 9.6E-17 T 28-03-2018 AL549_RS11810 b9e0d3b1abcea2029295848b4b152214 222 Gene3D G3DSA:3.40.30.10 1 89 2.9E-25 T 28-03-2018 AL549_RS11810 b9e0d3b1abcea2029295848b4b152214 222 SUPERFAMILY SSF47616 95 219 4.35E-20 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL549_RS11810 b9e0d3b1abcea2029295848b4b152214 222 SUPERFAMILY SSF52833 4 89 6.73E-22 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS11810 b9e0d3b1abcea2029295848b4b152214 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 83 7.6E-16 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL549_RS11810 b9e0d3b1abcea2029295848b4b152214 222 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 6 220 7.8E-79 T 28-03-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 AL549_RS00030 b631c61069aee68bc09caebadbdb16f5 276 Pfam PF02540 NAD synthase 21 270 3.2E-61 T 28-03-2018 IPR022310 NAD/GMP synthase AL549_RS00030 b631c61069aee68bc09caebadbdb16f5 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 20 272 2.7E-62 T 28-03-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 AL549_RS00030 b631c61069aee68bc09caebadbdb16f5 276 Gene3D G3DSA:3.40.50.620 1 276 3.3E-58 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS00030 b631c61069aee68bc09caebadbdb16f5 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 15 274 30.916 T 28-03-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 AL549_RS00030 b631c61069aee68bc09caebadbdb16f5 276 SUPERFAMILY SSF52402 2 276 7.15E-80 T 28-03-2018 AL549_RS10135 399a4344cbc09d79128ce7c4a63fc041 524 Gene3D G3DSA:3.30.870.10 40 256 7.6E-28 T 28-03-2018 AL549_RS10135 399a4344cbc09d79128ce7c4a63fc041 524 Gene3D G3DSA:3.30.870.10 257 469 4.3E-23 T 28-03-2018 AL549_RS10135 399a4344cbc09d79128ce7c4a63fc041 524 SMART SM00155 184 211 0.3 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL549_RS10135 399a4344cbc09d79128ce7c4a63fc041 524 SMART SM00155 418 445 0.025 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL549_RS10135 399a4344cbc09d79128ce7c4a63fc041 524 SUPERFAMILY SSF56024 36 261 3.14E-40 T 28-03-2018 AL549_RS10135 399a4344cbc09d79128ce7c4a63fc041 524 SUPERFAMILY SSF56024 300 468 1.55E-34 T 28-03-2018 AL549_RS10135 399a4344cbc09d79128ce7c4a63fc041 524 Pfam PF13091 PLD-like domain 96 243 1.5E-15 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL549_RS10135 399a4344cbc09d79128ce7c4a63fc041 524 Pfam PF13091 PLD-like domain 330 464 8.8E-22 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL549_RS09935 67f5ed7bdabecdb3678a9d07b48ab2ab 624 Gene3D G3DSA:1.20.1250.20 3 201 1.0E-10 T 28-03-2018 AL549_RS09935 67f5ed7bdabecdb3678a9d07b48ab2ab 624 Gene3D G3DSA:1.20.1250.20 214 418 1.2E-12 T 28-03-2018 AL549_RS09935 67f5ed7bdabecdb3678a9d07b48ab2ab 624 Pfam PF07690 Major Facilitator Superfamily 19 381 3.8E-18 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS09935 67f5ed7bdabecdb3678a9d07b48ab2ab 624 SUPERFAMILY SSF103473 13 423 9.68E-26 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS09935 67f5ed7bdabecdb3678a9d07b48ab2ab 624 SMART SM00563 456 570 1.5E-35 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS09935 67f5ed7bdabecdb3678a9d07b48ab2ab 624 SUPERFAMILY SSF69593 402 570 7.19E-30 T 28-03-2018 AL549_RS09935 67f5ed7bdabecdb3678a9d07b48ab2ab 624 Gene3D G3DSA:3.40.1130.10 419 621 5.5E-39 T 28-03-2018 AL549_RS09935 67f5ed7bdabecdb3678a9d07b48ab2ab 624 Pfam PF01553 Acyltransferase 442 567 3.1E-24 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS00165 e1654784ba59dd41ee655a6b000c353b 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 175 202 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00165 e1654784ba59dd41ee655a6b000c353b 219 SUPERFAMILY SSF46894 155 217 2.72E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS00165 e1654784ba59dd41ee655a6b000c353b 219 Gene3D G3DSA:1.10.10.10 119 219 2.4E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00165 e1654784ba59dd41ee655a6b000c353b 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 191 6.1E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00165 e1654784ba59dd41ee655a6b000c353b 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 203 6.1E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00165 e1654784ba59dd41ee655a6b000c353b 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 175 6.1E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00165 e1654784ba59dd41ee655a6b000c353b 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 161 215 1.5E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00165 e1654784ba59dd41ee655a6b000c353b 219 SMART SM00421 158 215 9.4E-23 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS12670 ad7931e829be131267d44206d8527377 275 Gene3D G3DSA:3.40.140.10 132 271 2.3E-47 T 28-03-2018 AL549_RS12670 ad7931e829be131267d44206d8527377 275 Pfam PF02634 FdhD/NarQ family 35 266 2.3E-73 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL549_RS12670 ad7931e829be131267d44206d8527377 275 SUPERFAMILY SSF53927 15 267 2.95E-70 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL549_RS12670 ad7931e829be131267d44206d8527377 275 PIRSF PIRSF015626 1 271 8.7E-97 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL549_RS12670 ad7931e829be131267d44206d8527377 275 Gene3D G3DSA:3.10.20.10 36 117 1.6E-9 T 28-03-2018 AL549_RS12670 ad7931e829be131267d44206d8527377 275 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 11 267 25.451 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL549_RS08845 5a157c5923af6ff36cc5b349a35d9bed 341 Pfam PF06144 DNA polymerase III, delta subunit 20 189 9.3E-50 T 28-03-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 AL549_RS08845 5a157c5923af6ff36cc5b349a35d9bed 341 SUPERFAMILY SSF48019 211 332 5.78E-30 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL549_RS08845 5a157c5923af6ff36cc5b349a35d9bed 341 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 328 1.9E-34 T 28-03-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS08845 5a157c5923af6ff36cc5b349a35d9bed 341 Gene3D G3DSA:1.10.8.60 142 219 2.9E-18 T 28-03-2018 AL549_RS08845 5a157c5923af6ff36cc5b349a35d9bed 341 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 330 2.0E-106 T 28-03-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AL549_RS08845 5a157c5923af6ff36cc5b349a35d9bed 341 Gene3D G3DSA:3.40.50.300 1 139 5.0E-25 T 28-03-2018 AL549_RS08845 5a157c5923af6ff36cc5b349a35d9bed 341 Gene3D G3DSA:1.20.272.10 220 336 2.1E-20 T 28-03-2018 AL549_RS08845 5a157c5923af6ff36cc5b349a35d9bed 341 SUPERFAMILY SSF52540 1 208 6.37E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS08730 8d95f408edfff17c20bb736ea20e790d 754 Pfam PF13424 Tetratricopeptide repeat 248 311 2.0E-7 T 28-03-2018 AL549_RS08730 8d95f408edfff17c20bb736ea20e790d 754 Gene3D G3DSA:3.30.70.270 507 692 2.4E-6 T 28-03-2018 AL549_RS08730 8d95f408edfff17c20bb736ea20e790d 754 Gene3D G3DSA:1.25.40.10 340 482 0.0016 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS08730 8d95f408edfff17c20bb736ea20e790d 754 SMART SM00028 288 321 0.13 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS08730 8d95f408edfff17c20bb736ea20e790d 754 SMART SM00028 82 115 11.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS08730 8d95f408edfff17c20bb736ea20e790d 754 SMART SM00028 328 361 11.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS08730 8d95f408edfff17c20bb736ea20e790d 754 SMART SM00028 168 201 35.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS08730 8d95f408edfff17c20bb736ea20e790d 754 SMART SM00028 248 281 54.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS08730 8d95f408edfff17c20bb736ea20e790d 754 Gene3D G3DSA:1.25.40.10 38 163 2.2E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS08730 8d95f408edfff17c20bb736ea20e790d 754 Gene3D G3DSA:1.10.150.160 290 339 3.1E-7 T 28-03-2018 AL549_RS08730 8d95f408edfff17c20bb736ea20e790d 754 SUPERFAMILY SSF48452 169 356 1.38E-19 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS08730 8d95f408edfff17c20bb736ea20e790d 754 Gene3D G3DSA:1.25.40.10 164 289 1.7E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS01655 f223fb75d118a17f5441ff344bcf046e 726 PIRSF PIRSF009393 1 726 5.6E-287 T 28-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AL549_RS01655 f223fb75d118a17f5441ff344bcf046e 726 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 725 0.0 T 28-03-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 AL549_RS01655 f223fb75d118a17f5441ff344bcf046e 726 SUPERFAMILY SSF53383 117 574 5.69E-117 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS01655 f223fb75d118a17f5441ff344bcf046e 726 Gene3D G3DSA:3.90.100.10 608 726 4.8E-35 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AL549_RS01655 f223fb75d118a17f5441ff344bcf046e 726 Gene3D G3DSA:3.40.50.220 3 116 2.5E-25 T 28-03-2018 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 AL549_RS01655 f223fb75d118a17f5441ff344bcf046e 726 Gene3D G3DSA:3.40.640.10 117 426 7.9E-35 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS01655 f223fb75d118a17f5441ff344bcf046e 726 SUPERFAMILY SSF55904 578 725 6.28E-44 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AL549_RS01655 f223fb75d118a17f5441ff344bcf046e 726 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 117 557 6.4E-187 T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AL549_RS01655 f223fb75d118a17f5441ff344bcf046e 726 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 358 372 - T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AL549_RS01655 f223fb75d118a17f5441ff344bcf046e 726 Gene3D G3DSA:3.90.1150.10 429 607 7.4E-51 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS01655 f223fb75d118a17f5441ff344bcf046e 726 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 19 111 4.7E-13 T 28-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AL549_RS01655 f223fb75d118a17f5441ff344bcf046e 726 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 583 711 2.4E-46 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AL549_RS01655 f223fb75d118a17f5441ff344bcf046e 726 SUPERFAMILY SSF52172 1 116 5.47E-25 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS15430 dca75ccc37107f04c9bbbfe4ff3938ae 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 51.183 T 28-03-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AL549_RS15430 dca75ccc37107f04c9bbbfe4ff3938ae 295 SUPERFAMILY SSF53927 152 290 1.29E-40 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL549_RS15430 dca75ccc37107f04c9bbbfe4ff3938ae 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL549_RS15430 dca75ccc37107f04c9bbbfe4ff3938ae 295 PIRSF PIRSF006334 14 295 1.1E-112 T 28-03-2018 AL549_RS15430 dca75ccc37107f04c9bbbfe4ff3938ae 295 Gene3D G3DSA:3.40.140.10 182 292 4.5E-18 T 28-03-2018 AL549_RS15430 dca75ccc37107f04c9bbbfe4ff3938ae 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 2.4E-44 T 28-03-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AL549_RS15430 dca75ccc37107f04c9bbbfe4ff3938ae 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 140 2.9E-12 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AL549_RS15430 dca75ccc37107f04c9bbbfe4ff3938ae 295 SUPERFAMILY SSF53927 1 147 3.51E-41 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL549_RS15430 dca75ccc37107f04c9bbbfe4ff3938ae 295 Gene3D G3DSA:3.40.140.10 41 171 2.6E-27 T 28-03-2018 AL549_RS15430 dca75ccc37107f04c9bbbfe4ff3938ae 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 295 6.6E-101 T 28-03-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AL549_RS20850 280ab013ce4ee55ac998fbd644167bfe 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 4.5E-104 T 28-03-2018 AL549_RS20850 280ab013ce4ee55ac998fbd644167bfe 295 Gene3D G3DSA:3.40.50.150 100 293 1.1E-33 T 28-03-2018 AL549_RS20850 280ab013ce4ee55ac998fbd644167bfe 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 4.1E-108 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AL549_RS20850 280ab013ce4ee55ac998fbd644167bfe 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.178 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AL549_RS20850 280ab013ce4ee55ac998fbd644167bfe 295 SUPERFAMILY SSF53335 44 274 2.28E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS20850 280ab013ce4ee55ac998fbd644167bfe 295 PIRSF PIRSF000401 1 295 8.5E-99 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AL549_RS02805 07d28c88380834e6db3b4a42dc031584 231 Pfam PF00072 Response regulator receiver domain 4 113 3.9E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS02805 07d28c88380834e6db3b4a42dc031584 231 Gene3D G3DSA:1.10.10.10 126 228 2.6E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02805 07d28c88380834e6db3b4a42dc031584 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 3.5E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS02805 07d28c88380834e6db3b4a42dc031584 231 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 222 8.5E-101 T 28-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 AL549_RS02805 07d28c88380834e6db3b4a42dc031584 231 SUPERFAMILY SSF52172 1 178 2.87E-39 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS02805 07d28c88380834e6db3b4a42dc031584 231 Gene3D G3DSA:3.40.50.2300 1 125 2.2E-33 T 28-03-2018 AL549_RS02805 07d28c88380834e6db3b4a42dc031584 231 SMART SM00862 147 222 3.6E-24 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS02805 07d28c88380834e6db3b4a42dc031584 231 SMART SM00448 1 112 2.1E-39 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS17405 e652d5e6410a5d8debac64bdc730c59c 497 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 91 372 3.8E-70 T 28-03-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 AL549_RS17405 e652d5e6410a5d8debac64bdc730c59c 497 SMART SM00962 284 477 1.8E-65 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL549_RS17405 e652d5e6410a5d8debac64bdc730c59c 497 SUPERFAMILY SSF52540 280 472 1.02E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS17405 e652d5e6410a5d8debac64bdc730c59c 497 Gene3D G3DSA:3.40.50.300 281 478 1.2E-23 T 28-03-2018 AL549_RS17405 e652d5e6410a5d8debac64bdc730c59c 497 SMART SM00382 283 450 2.2E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS17405 e652d5e6410a5d8debac64bdc730c59c 497 Pfam PF00448 SRP54-type protein, GTPase domain 286 474 5.5E-39 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 551 612 5.9E-11 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 SUPERFAMILY SSF51905 147 305 3.49E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 PIRSF PIRSF037149 1 826 0.0 T 28-03-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 SUPERFAMILY SSF56014 624 799 1.22E-50 T 28-03-2018 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 Gene3D G3DSA:3.50.50.60 2 102 5.5E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 Gene3D G3DSA:3.90.480.10 404 619 8.5E-19 T 28-03-2018 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 Gene3D G3DSA:3.50.50.60 103 240 4.3E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 4 791 0.0 T 28-03-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 Gene3D G3DSA:3.50.50.60 244 343 3.2E-6 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 283 3.0E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 1.3E-10 T 28-03-2018 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 1.3E-10 T 28-03-2018 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 1.3E-10 T 28-03-2018 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.3E-10 T 28-03-2018 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 623 748 3.0E-19 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 SUPERFAMILY SSF51905 3 189 5.07E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 SUPERFAMILY SSF55124 493 632 2.94E-27 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 670 686 - T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 5.0E-16 T 28-03-2018 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.0E-16 T 28-03-2018 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 5.0E-16 T 28-03-2018 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 5.0E-16 T 28-03-2018 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 5.0E-16 T 28-03-2018 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 Pfam PF04324 BFD-like [2Fe-2S] binding domain 414 462 1.0E-14 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 Gene3D G3DSA:3.30.413.10 621 793 1.1E-39 T 28-03-2018 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 PRINTS PR00397 Sirohaem Fe-binding site signature 670 688 8.5E-7 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS05315 dc52b34d0ab0cfd279f2a9cde0935daf 827 PRINTS PR00397 Sirohaem Fe-binding site signature 627 645 8.5E-7 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS18445 b68c07a7fcba3eaf00811e4dc83d9a98 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 3.4E-159 T 28-03-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS18445 b68c07a7fcba3eaf00811e4dc83d9a98 442 Gene3D G3DSA:3.40.1030.10 69 342 8.6E-84 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS18445 b68c07a7fcba3eaf00811e4dc83d9a98 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 1.5E-20 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS18445 b68c07a7fcba3eaf00811e4dc83d9a98 442 SUPERFAMILY SSF47648 2 70 4.32E-21 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS18445 b68c07a7fcba3eaf00811e4dc83d9a98 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 28-03-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS18445 b68c07a7fcba3eaf00811e4dc83d9a98 442 SMART SM00941 350 424 2.8E-28 T 28-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS18445 b68c07a7fcba3eaf00811e4dc83d9a98 442 PIRSF PIRSF000478 1 439 9.1E-149 T 28-03-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS18445 b68c07a7fcba3eaf00811e4dc83d9a98 442 Gene3D G3DSA:1.20.970.10 3 67 5.8E-23 T 28-03-2018 AL549_RS18445 b68c07a7fcba3eaf00811e4dc83d9a98 442 SUPERFAMILY SSF54680 337 437 8.89E-29 T 28-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS18445 b68c07a7fcba3eaf00811e4dc83d9a98 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 9.0E-49 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS18445 b68c07a7fcba3eaf00811e4dc83d9a98 442 Gene3D G3DSA:3.90.1170.30 343 429 8.0E-26 T 28-03-2018 AL549_RS18445 b68c07a7fcba3eaf00811e4dc83d9a98 442 SUPERFAMILY SSF52418 73 334 2.75E-89 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS18445 b68c07a7fcba3eaf00811e4dc83d9a98 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 8.8E-24 T 28-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS18445 b68c07a7fcba3eaf00811e4dc83d9a98 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 437 45.254 T 28-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 AL549_RS18445 b68c07a7fcba3eaf00811e4dc83d9a98 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 4.8E-213 T 28-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 AL549_RS11795 9399bbbb32a728738b033daf389d2197 357 Gene3D G3DSA:3.10.180.10 158 355 2.1E-61 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS11795 9399bbbb32a728738b033daf389d2197 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 8.4E-58 T 28-03-2018 AL549_RS11795 9399bbbb32a728738b033daf389d2197 357 PIRSF PIRSF009283 1 355 3.6E-127 T 28-03-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AL549_RS11795 9399bbbb32a728738b033daf389d2197 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 1.3E-134 T 28-03-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AL549_RS11795 9399bbbb32a728738b033daf389d2197 357 SUPERFAMILY SSF54593 5 341 5.15E-81 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS11795 9399bbbb32a728738b033daf389d2197 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 275 5.4E-15 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL549_RS11795 9399bbbb32a728738b033daf389d2197 357 Gene3D G3DSA:3.10.180.10 3 155 7.6E-17 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS08065 ebf4b01fb0b316c51d52fd59fb919207 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL549_RS08065 ebf4b01fb0b316c51d52fd59fb919207 466 Pfam PF16325 Peptidase family U32 C-terminal domain 371 452 6.3E-21 T 28-03-2018 IPR032525 Peptidase family U32, C-terminal AL549_RS08065 ebf4b01fb0b316c51d52fd59fb919207 466 Gene3D G3DSA:3.20.20.70 7 177 9.7E-5 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS08065 ebf4b01fb0b316c51d52fd59fb919207 466 Pfam PF01136 Peptidase family U32 80 355 9.3E-96 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL549_RS16915 ed549b91a40e3b878092e53fb0d73e3d 386 Gene3D G3DSA:3.40.1350.10 240 383 3.9E-38 T 28-03-2018 AL549_RS16915 ed549b91a40e3b878092e53fb0d73e3d 386 Gene3D G3DSA:1.10.10.680 166 239 1.3E-35 T 28-03-2018 AL549_RS16915 ed549b91a40e3b878092e53fb0d73e3d 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 3.6E-169 T 28-03-2018 IPR015093 Protein of unknown function DUF1887 AL549_RS16915 ed549b91a40e3b878092e53fb0d73e3d 386 SUPERFAMILY SSF52980 1 382 4.11E-121 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL549_RS16915 ed549b91a40e3b878092e53fb0d73e3d 386 Gene3D G3DSA:3.40.50.10770 1 140 4.5E-19 T 28-03-2018 AL549_RS07065 d8398ea38f760c27b17d4d2e4fe1c23c 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 265 302 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL549_RS07065 d8398ea38f760c27b17d4d2e4fe1c23c 459 PIRSF PIRSF000521 8 158 1.7E-6 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL549_RS07065 d8398ea38f760c27b17d4d2e4fe1c23c 459 PIRSF PIRSF000521 151 452 2.1E-20 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL549_RS07065 d8398ea38f760c27b17d4d2e4fe1c23c 459 Pfam PF00202 Aminotransferase class-III 57 449 6.9E-86 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL549_RS07065 d8398ea38f760c27b17d4d2e4fe1c23c 459 Gene3D G3DSA:3.90.1150.10 337 453 9.7E-27 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS07065 d8398ea38f760c27b17d4d2e4fe1c23c 459 Gene3D G3DSA:3.40.640.10 213 336 1.9E-27 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS07065 d8398ea38f760c27b17d4d2e4fe1c23c 459 Gene3D G3DSA:3.90.1150.10 19 191 1.7E-30 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS07065 d8398ea38f760c27b17d4d2e4fe1c23c 459 SUPERFAMILY SSF53383 57 450 5.36E-106 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS08505 ee7d51d7eac30c346e6c2871a51c45ce 170 Pfam PF12019 Type II transport protein GspH 42 138 2.1E-8 T 28-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AL549_RS08505 ee7d51d7eac30c346e6c2871a51c45ce 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 3.6E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS08505 ee7d51d7eac30c346e6c2871a51c45ce 170 Gene3D G3DSA:3.30.700.10 5 165 1.1E-10 T 28-03-2018 AL549_RS08505 ee7d51d7eac30c346e6c2871a51c45ce 170 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS08505 ee7d51d7eac30c346e6c2871a51c45ce 170 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 24 2.6E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS08505 ee7d51d7eac30c346e6c2871a51c45ce 170 SUPERFAMILY SSF54523 5 149 3.22E-15 T 28-03-2018 AL549_RS08505 ee7d51d7eac30c346e6c2871a51c45ce 170 PIRSF PIRSF024622 1 170 1.1E-82 T 28-03-2018 IPR016824 Tfp pilus assembly protein FimT AL549_RS01430 a036437a613397446da874b57aee8622 340 Pfam PF13377 Periplasmic binding protein-like domain 178 335 8.4E-38 T 28-03-2018 AL549_RS01430 a036437a613397446da874b57aee8622 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 13 31 - T 28-03-2018 AL549_RS01430 a036437a613397446da874b57aee8622 340 SUPERFAMILY SSF53822 70 336 1.4E-78 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS01430 a036437a613397446da874b57aee8622 340 Gene3D G3DSA:1.10.260.40 12 68 9.2E-16 T 28-03-2018 AL549_RS01430 a036437a613397446da874b57aee8622 340 SUPERFAMILY SSF47413 11 60 4.98E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS01430 a036437a613397446da874b57aee8622 340 Gene3D G3DSA:3.40.50.2300 69 174 6.4E-26 T 28-03-2018 AL549_RS01430 a036437a613397446da874b57aee8622 340 Gene3D G3DSA:3.40.50.2300 175 338 2.2E-52 T 28-03-2018 AL549_RS01430 a036437a613397446da874b57aee8622 340 SMART SM00354 10 80 1.4E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS01430 a036437a613397446da874b57aee8622 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 57 9.2E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS22225 9463a5d6af25a20a8494eb69eb25a8e8 237 Gene3D G3DSA:2.40.30.10 1 102 1.1E-14 T 28-03-2018 AL549_RS22225 9463a5d6af25a20a8494eb69eb25a8e8 237 Gene3D G3DSA:3.40.50.80 103 237 3.0E-23 T 28-03-2018 AL549_RS22225 9463a5d6af25a20a8494eb69eb25a8e8 237 SUPERFAMILY SSF52343 104 235 1.44E-33 T 28-03-2018 AL549_RS22225 9463a5d6af25a20a8494eb69eb25a8e8 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 2.8E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL549_RS22225 9463a5d6af25a20a8494eb69eb25a8e8 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 2.8E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL549_RS22225 9463a5d6af25a20a8494eb69eb25a8e8 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 2.8E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL549_RS22225 9463a5d6af25a20a8494eb69eb25a8e8 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 2.8E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL549_RS22225 9463a5d6af25a20a8494eb69eb25a8e8 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 2.8E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL549_RS22225 9463a5d6af25a20a8494eb69eb25a8e8 237 SUPERFAMILY SSF63380 2 101 8.37E-18 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL549_RS22225 9463a5d6af25a20a8494eb69eb25a8e8 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 214 1.6E-20 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL549_RS08220 fd9842cf51db04c61394bf00e3efc61b 242 SUPERFAMILY SSF75217 5 175 2.88E-37 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AL549_RS08220 fd9842cf51db04c61394bf00e3efc61b 242 Gene3D G3DSA:3.40.1280.10 1 165 5.5E-41 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL549_RS08220 fd9842cf51db04c61394bf00e3efc61b 242 PIRSF PIRSF004808 1 242 1.2E-73 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AL549_RS08220 fd9842cf51db04c61394bf00e3efc61b 242 Pfam PF00588 SpoU rRNA Methylase family 5 153 7.7E-34 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL549_RS08220 fd9842cf51db04c61394bf00e3efc61b 242 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 239 7.7E-83 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AL549_RS18300 4af40ab1d45f2e05dbce1b19f0aaa1ad 346 Pfam PF07719 Tetratricopeptide repeat 219 249 9.6E-8 T 28-03-2018 IPR013105 Tetratricopeptide repeat 2 AL549_RS18300 4af40ab1d45f2e05dbce1b19f0aaa1ad 346 Gene3D G3DSA:1.25.40.10 267 345 2.3E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS18300 4af40ab1d45f2e05dbce1b19f0aaa1ad 346 SUPERFAMILY SSF48452 56 325 5.69E-30 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS18300 4af40ab1d45f2e05dbce1b19f0aaa1ad 346 Gene3D G3DSA:1.10.150.200 129 163 8.6E-5 T 28-03-2018 AL549_RS18300 4af40ab1d45f2e05dbce1b19f0aaa1ad 346 SMART SM00028 121 154 1.7 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS18300 4af40ab1d45f2e05dbce1b19f0aaa1ad 346 SMART SM00028 216 249 4.3E-4 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS18300 4af40ab1d45f2e05dbce1b19f0aaa1ad 346 SMART SM00028 182 215 0.05 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS18300 4af40ab1d45f2e05dbce1b19f0aaa1ad 346 SMART SM00028 87 120 6.1E-4 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS18300 4af40ab1d45f2e05dbce1b19f0aaa1ad 346 SMART SM00028 280 313 1.6E-4 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS18300 4af40ab1d45f2e05dbce1b19f0aaa1ad 346 Gene3D G3DSA:1.25.40.10 52 128 3.8E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS18300 4af40ab1d45f2e05dbce1b19f0aaa1ad 346 Gene3D G3DSA:1.25.40.10 227 266 1.3E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS18300 4af40ab1d45f2e05dbce1b19f0aaa1ad 346 Pfam PF13432 Tetratricopeptide repeat 91 148 3.2E-6 T 28-03-2018 AL549_RS18300 4af40ab1d45f2e05dbce1b19f0aaa1ad 346 Pfam PF13432 Tetratricopeptide repeat 180 214 0.012 T 28-03-2018 AL549_RS18300 4af40ab1d45f2e05dbce1b19f0aaa1ad 346 Gene3D G3DSA:1.25.40.10 178 226 3.6E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS18300 4af40ab1d45f2e05dbce1b19f0aaa1ad 346 Pfam PF13181 Tetratricopeptide repeat 281 308 0.018 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS19630 58a6d4073ff89f28cd8f93d11e2e4d49 158 Pfam PF06271 RDD family 9 148 1.7E-21 T 28-03-2018 IPR010432 RDD AL549_RS05680 79a2c2f71121f1899d02e02e6ecb7db1 220 Gene3D G3DSA:1.10.10.10 124 220 2.5E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS05680 79a2c2f71121f1899d02e02e6ecb7db1 220 SUPERFAMILY SSF46894 124 218 2.64E-29 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS05680 79a2c2f71121f1899d02e02e6ecb7db1 220 SMART SM00448 3 111 9.5E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS05680 79a2c2f71121f1899d02e02e6ecb7db1 220 Pfam PF00072 Response regulator receiver domain 6 112 1.5E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS05680 79a2c2f71121f1899d02e02e6ecb7db1 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 2.2E-24 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS05680 79a2c2f71121f1899d02e02e6ecb7db1 220 SUPERFAMILY SSF52172 4 116 1.42E-27 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS05680 79a2c2f71121f1899d02e02e6ecb7db1 220 Gene3D G3DSA:3.40.50.2300 2 123 6.9E-23 T 28-03-2018 AL549_RS05680 79a2c2f71121f1899d02e02e6ecb7db1 220 SMART SM00862 147 218 1.1E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS02595 1794e87233db4768974f8835e96b550e 178 SUPERFAMILY SSF55729 1 137 5.66E-20 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS02595 1794e87233db4768974f8835e96b550e 178 Gene3D G3DSA:3.40.630.30 1 150 7.9E-16 T 28-03-2018 AL549_RS02595 1794e87233db4768974f8835e96b550e 178 Pfam PF13508 Acetyltransferase (GNAT) domain 52 131 5.8E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS09480 95d817a6f98a8de701cd265c811c29ed 588 PIRSF PIRSF000171 1 580 4.9E-49 T 28-03-2018 AL549_RS09480 95d817a6f98a8de701cd265c811c29ed 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 28-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS09480 95d817a6f98a8de701cd265c811c29ed 588 Gene3D G3DSA:3.50.50.60 302 430 8.5E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS09480 95d817a6f98a8de701cd265c811c29ed 588 Gene3D G3DSA:3.50.50.60 4 294 7.4E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS09480 95d817a6f98a8de701cd265c811c29ed 588 Pfam PF00890 FAD binding domain 9 405 6.9E-118 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS09480 95d817a6f98a8de701cd265c811c29ed 588 Gene3D G3DSA:1.20.58.100 431 540 1.4E-34 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS09480 95d817a6f98a8de701cd265c811c29ed 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 1.5E-274 T 28-03-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS09480 95d817a6f98a8de701cd265c811c29ed 588 SUPERFAMILY SSF51905 5 259 1.76E-71 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS09480 95d817a6f98a8de701cd265c811c29ed 588 SUPERFAMILY SSF51905 359 440 1.76E-71 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS09480 95d817a6f98a8de701cd265c811c29ed 588 Gene3D G3DSA:4.10.80.40 541 588 4.9E-14 T 28-03-2018 AL549_RS09480 95d817a6f98a8de701cd265c811c29ed 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 1.5E-36 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS09480 95d817a6f98a8de701cd265c811c29ed 588 SUPERFAMILY SSF46977 451 588 1.96E-46 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS09480 95d817a6f98a8de701cd265c811c29ed 588 SUPERFAMILY SSF56425 236 356 2.69E-42 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS09480 95d817a6f98a8de701cd265c811c29ed 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 5.0E-240 T 28-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS02790 c8f8f2700db9727847f2518cb2db7fe8 354 Pfam PF13533 Biotin-lipoyl like 44 88 7.2E-17 T 28-03-2018 AL549_RS02790 c8f8f2700db9727847f2518cb2db7fe8 354 Pfam PF13437 HlyD family secretion protein 200 272 2.0E-8 T 28-03-2018 AL549_RS02790 c8f8f2700db9727847f2518cb2db7fe8 354 Gene3D G3DSA:2.40.50.100 44 112 2.3E-12 T 28-03-2018 AL549_RS02790 c8f8f2700db9727847f2518cb2db7fe8 354 Gene3D G3DSA:2.40.50.100 198 314 0.083 T 28-03-2018 AL549_RS02790 c8f8f2700db9727847f2518cb2db7fe8 354 SUPERFAMILY SSF111369 38 96 7.32E-9 T 28-03-2018 AL549_RS02790 c8f8f2700db9727847f2518cb2db7fe8 354 SUPERFAMILY SSF111369 109 152 3.92E-8 T 28-03-2018 AL549_RS02790 c8f8f2700db9727847f2518cb2db7fe8 354 SUPERFAMILY SSF111369 184 252 3.92E-8 T 28-03-2018 AL549_RS02790 c8f8f2700db9727847f2518cb2db7fe8 354 Gene3D G3DSA:1.10.287.470 113 165 3.2E-9 T 28-03-2018 AL549_RS16370 493ab8c421e1a8761bc63ddb9022320c 195 SUPERFAMILY SSF53335 5 156 1.48E-29 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS16370 493ab8c421e1a8761bc63ddb9022320c 195 Gene3D G3DSA:3.40.50.150 2 195 1.2E-29 T 28-03-2018 AL549_RS16370 493ab8c421e1a8761bc63ddb9022320c 195 Pfam PF13489 Methyltransferase domain 21 135 8.6E-16 T 28-03-2018 AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 SUPERFAMILY SSF50800 74 169 7.15E-25 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 Gene3D G3DSA:3.20.20.60 171 327 2.4E-54 T 28-03-2018 AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 PRINTS PR01050 Pyruvate kinase family signature 250 274 2.2E-55 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 PRINTS PR01050 Pyruvate kinase family signature 63 79 2.2E-55 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 PRINTS PR01050 Pyruvate kinase family signature 275 299 2.2E-55 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 PRINTS PR01050 Pyruvate kinase family signature 190 204 2.2E-55 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 PRINTS PR01050 Pyruvate kinase family signature 300 318 2.2E-55 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 PRINTS PR01050 Pyruvate kinase family signature 223 249 2.2E-55 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 PRINTS PR01050 Pyruvate kinase family signature 319 335 2.2E-55 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 2.1E-28 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 28-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 2.8E-167 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 4.5E-130 T 28-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 Gene3D G3DSA:2.40.33.10 79 170 4.7E-22 T 28-03-2018 AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 SUPERFAMILY SSF52935 329 480 7.98E-38 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 Gene3D G3DSA:3.20.20.60 1 78 5.1E-16 T 28-03-2018 AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 SUPERFAMILY SSF51621 171 345 1.02E-85 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 SUPERFAMILY SSF51621 4 79 1.02E-85 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL549_RS10790 994ce486c258ce6d42a0eb336e55a131 482 Gene3D G3DSA:3.40.1380.20 328 481 1.4E-43 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS10685 ae9b234a498a6e150c6ee5885a9c0a53 194 Pfam PF02545 Maf-like protein 5 187 4.6E-46 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AL549_RS10685 ae9b234a498a6e150c6ee5885a9c0a53 194 PIRSF PIRSF006305 1 192 1.1E-44 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AL549_RS10685 ae9b234a498a6e150c6ee5885a9c0a53 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 8.2E-54 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AL549_RS10685 ae9b234a498a6e150c6ee5885a9c0a53 194 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 29.709 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AL549_RS10685 ae9b234a498a6e150c6ee5885a9c0a53 194 Gene3D G3DSA:3.90.950.10 4 194 1.3E-56 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL549_RS10685 ae9b234a498a6e150c6ee5885a9c0a53 194 SUPERFAMILY SSF52972 2 186 4.71E-57 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL549_RS01465 ca822321253dad0a89cf80bda8c89185 437 SUPERFAMILY SSF56935 79 437 2.14E-91 T 28-03-2018 AL549_RS01465 ca822321253dad0a89cf80bda8c89185 437 Gene3D G3DSA:2.40.170.10 78 437 2.5E-78 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AL549_RS01465 ca822321253dad0a89cf80bda8c89185 437 Pfam PF02264 LamB porin 80 437 1.5E-73 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AL549_RS01465 ca822321253dad0a89cf80bda8c89185 437 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 108 407 1.0E-39 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AL549_RS07130 402cf57b98bac2b058891151e97e0eeb 132 Gene3D G3DSA:3.30.300.20 35 132 4.3E-16 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL549_RS07130 402cf57b98bac2b058891151e97e0eeb 132 Gene3D G3DSA:2.20.25.10 1 29 2.2E-14 T 28-03-2018 AL549_RS07130 402cf57b98bac2b058891151e97e0eeb 132 SUPERFAMILY SSF82784 1 131 1.02E-38 T 28-03-2018 IPR003718 OsmC/Ohr family AL549_RS07130 402cf57b98bac2b058891151e97e0eeb 132 Pfam PF02566 OsmC-like protein 29 127 6.0E-16 T 28-03-2018 IPR003718 OsmC/Ohr family AL549_RS23125 c15d807e206cf4d443a8cc0ef803210b 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 28-03-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23125 c15d807e206cf4d443a8cc0ef803210b 274 SUPERFAMILY SSF50249 2 125 1.37E-49 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS23125 c15d807e206cf4d443a8cc0ef803210b 274 SMART SM01383 42 118 3.5E-47 T 28-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23125 c15d807e206cf4d443a8cc0ef803210b 274 Gene3D G3DSA:2.30.30.30 119 195 8.7E-31 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 AL549_RS23125 c15d807e206cf4d443a8cc0ef803210b 274 Gene3D G3DSA:2.40.50.140 1 114 3.2E-47 T 28-03-2018 AL549_RS23125 c15d807e206cf4d443a8cc0ef803210b 274 PIRSF PIRSF002158 13 274 2.0E-101 T 28-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23125 c15d807e206cf4d443a8cc0ef803210b 274 SMART SM01382 124 252 1.7E-91 T 28-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AL549_RS23125 c15d807e206cf4d443a8cc0ef803210b 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.815 T 28-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AL549_RS23125 c15d807e206cf4d443a8cc0ef803210b 274 SUPERFAMILY SSF50104 127 272 4.03E-61 T 28-03-2018 IPR008991 Translation protein SH3-like domain AL549_RS23125 c15d807e206cf4d443a8cc0ef803210b 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 1.2E-129 T 28-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AL549_RS23125 c15d807e206cf4d443a8cc0ef803210b 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 6.1E-56 T 28-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AL549_RS23125 c15d807e206cf4d443a8cc0ef803210b 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 4.0E-34 T 28-03-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23125 c15d807e206cf4d443a8cc0ef803210b 274 Gene3D G3DSA:4.10.950.10 197 273 7.0E-37 T 28-03-2018 IPR014726 Ribosomal protein L2, domain 3 AL549_RS18230 d0adefb751d21da0b9d2b670916204c6 352 PIRSF PIRSF005096 3 352 5.7E-117 T 28-03-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AL549_RS18230 d0adefb751d21da0b9d2b670916204c6 352 Gene3D G3DSA:2.70.98.10 9 352 2.6E-107 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL549_RS18230 d0adefb751d21da0b9d2b670916204c6 352 Pfam PF01263 Aldose 1-epimerase 22 349 7.8E-87 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AL549_RS18230 d0adefb751d21da0b9d2b670916204c6 352 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 17 350 1.2E-155 T 28-03-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AL549_RS18230 d0adefb751d21da0b9d2b670916204c6 352 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 176 185 - T 28-03-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AL549_RS18230 d0adefb751d21da0b9d2b670916204c6 352 SUPERFAMILY SSF74650 8 350 5.97E-107 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AL549_RS15730 1b7950c5c3ba8f870e15453ba92fe933 515 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 355 513 3.4E-34 T 28-03-2018 IPR000160 GGDEF domain AL549_RS15730 1b7950c5c3ba8f870e15453ba92fe933 515 Pfam PF00990 Diguanylate cyclase, GGDEF domain 360 509 6.6E-35 T 28-03-2018 IPR000160 GGDEF domain AL549_RS15730 1b7950c5c3ba8f870e15453ba92fe933 515 Pfam PF03924 CHASE domain 85 274 1.2E-28 T 28-03-2018 IPR006189 CHASE domain AL549_RS15730 1b7950c5c3ba8f870e15453ba92fe933 515 SMART SM00267 348 514 2.9E-38 T 28-03-2018 IPR000160 GGDEF domain AL549_RS15730 1b7950c5c3ba8f870e15453ba92fe933 515 SUPERFAMILY SSF55073 364 513 2.04E-38 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS15730 1b7950c5c3ba8f870e15453ba92fe933 515 SMART SM01079 80 276 8.4E-37 T 28-03-2018 IPR006189 CHASE domain AL549_RS15730 1b7950c5c3ba8f870e15453ba92fe933 515 Gene3D G3DSA:3.30.70.270 342 515 2.7E-46 T 28-03-2018 AL549_RS03960 5a24c2fcfae7d0d7411a0c551f7effac 442 PIRSF PIRSF006603 2 441 5.0E-82 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS03960 5a24c2fcfae7d0d7411a0c551f7effac 442 Pfam PF01554 MatE 237 388 3.7E-14 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS03960 5a24c2fcfae7d0d7411a0c551f7effac 442 Pfam PF01554 MatE 18 178 3.5E-22 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS03960 5a24c2fcfae7d0d7411a0c551f7effac 442 TIGRFAM TIGR00797 matE: MATE efflux family protein 18 400 1.9E-46 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS11365 1bef155f78c9c37307ff02c6e418bba8 310 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 309 3.0E-168 T 28-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AL549_RS11365 1bef155f78c9c37307ff02c6e418bba8 310 SUPERFAMILY SSF53335 4 287 2.67E-50 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS11365 1bef155f78c9c37307ff02c6e418bba8 310 Gene3D G3DSA:3.40.50.150 135 300 2.0E-20 T 28-03-2018 AL549_RS02305 30b1830b5cb70c2a35231a7c9479b577 253 SUPERFAMILY SSF51735 6 252 8.23E-76 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS02305 30b1830b5cb70c2a35231a7c9479b577 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 4.4E-129 T 28-03-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 AL549_RS02305 30b1830b5cb70c2a35231a7c9479b577 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL549_RS02305 30b1830b5cb70c2a35231a7c9479b577 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 7.6E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS02305 30b1830b5cb70c2a35231a7c9479b577 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 7.6E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS02305 30b1830b5cb70c2a35231a7c9479b577 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 7.6E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS02305 30b1830b5cb70c2a35231a7c9479b577 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 7.6E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS02305 30b1830b5cb70c2a35231a7c9479b577 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 7.6E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS02305 30b1830b5cb70c2a35231a7c9479b577 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 7.6E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS02305 30b1830b5cb70c2a35231a7c9479b577 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 250 3.3E-57 T 28-03-2018 AL549_RS02305 30b1830b5cb70c2a35231a7c9479b577 253 Gene3D G3DSA:3.40.50.720 47 253 9.0E-60 T 28-03-2018 AL549_RS02305 30b1830b5cb70c2a35231a7c9479b577 253 Gene3D G3DSA:3.40.50.720 3 46 1.8E-7 T 28-03-2018 AL549_RS02305 30b1830b5cb70c2a35231a7c9479b577 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.7E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS02305 30b1830b5cb70c2a35231a7c9479b577 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 3.7E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS02305 30b1830b5cb70c2a35231a7c9479b577 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.7E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS12130 953dc00880b96cb097cfbbab9f1db9e0 211 PIRSF PIRSF006324 1 210 4.8E-56 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL549_RS12130 953dc00880b96cb097cfbbab9f1db9e0 211 Pfam PF01810 LysE type translocator 15 208 2.0E-31 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL549_RS18670 b1fae8e4842fda2d9dd0793ea33ed84b 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.897 T 28-03-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 AL549_RS18670 b1fae8e4842fda2d9dd0793ea33ed84b 113 SUPERFAMILY SSF89360 7 99 1.14E-29 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL549_RS18670 b1fae8e4842fda2d9dd0793ea33ed84b 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 4.7E-37 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AL549_RS18670 b1fae8e4842fda2d9dd0793ea33ed84b 113 Gene3D G3DSA:2.60.300.12 7 113 2.1E-37 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL549_RS18670 b1fae8e4842fda2d9dd0793ea33ed84b 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 5.0E-19 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL549_RS18670 b1fae8e4842fda2d9dd0793ea33ed84b 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AL549_RS22570 516401142fe83c67cdc680bdedc53762 160 Gene3D G3DSA:1.10.287.180 3 75 1.6E-27 T 28-03-2018 AL549_RS22570 516401142fe83c67cdc680bdedc53762 160 SUPERFAMILY SSF54534 80 156 3.4E-20 T 28-03-2018 AL549_RS22570 516401142fe83c67cdc680bdedc53762 160 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 27.236 T 28-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AL549_RS22570 516401142fe83c67cdc680bdedc53762 160 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 6.1E-25 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AL549_RS22570 516401142fe83c67cdc680bdedc53762 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 1.4E-23 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL549_RS22570 516401142fe83c67cdc680bdedc53762 160 PIRSF PIRSF006092 1 158 1.9E-44 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AL549_RS22570 516401142fe83c67cdc680bdedc53762 160 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 3.1E-72 T 28-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AL549_RS22570 516401142fe83c67cdc680bdedc53762 160 SUPERFAMILY SSF46557 3 77 2.49E-26 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AL549_RS22570 516401142fe83c67cdc680bdedc53762 160 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL549_RS22570 516401142fe83c67cdc680bdedc53762 160 Gene3D G3DSA:3.10.50.30 76 160 2.2E-24 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL549_RS22570 516401142fe83c67cdc680bdedc53762 160 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL549_RS22570 516401142fe83c67cdc680bdedc53762 160 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 50.933 T 28-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AL549_RS02010 9794ae4f78aabc06bbb468b7b5937b13 345 Pfam PF01339 CheB methylesterase 161 339 5.7E-58 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL549_RS02010 9794ae4f78aabc06bbb468b7b5937b13 345 PIRSF PIRSF000876 3 345 1.5E-131 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL549_RS02010 9794ae4f78aabc06bbb468b7b5937b13 345 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 6 345 39.328 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL549_RS02010 9794ae4f78aabc06bbb468b7b5937b13 345 Gene3D G3DSA:3.40.50.2300 1 155 1.2E-28 T 28-03-2018 AL549_RS02010 9794ae4f78aabc06bbb468b7b5937b13 345 SMART SM00448 6 119 4.2E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS02010 9794ae4f78aabc06bbb468b7b5937b13 345 SUPERFAMILY SSF52172 4 111 9.68E-28 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS02010 9794ae4f78aabc06bbb468b7b5937b13 345 SUPERFAMILY SSF52738 156 344 2.22E-67 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL549_RS02010 9794ae4f78aabc06bbb468b7b5937b13 345 Pfam PF00072 Response regulator receiver domain 8 111 2.5E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS02010 9794ae4f78aabc06bbb468b7b5937b13 345 Gene3D G3DSA:3.40.50.180 156 345 3.1E-72 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL549_RS10330 2b95b7701ef8f0433b5bf236c318b65d 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 5.7E-37 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS10330 2b95b7701ef8f0433b5bf236c318b65d 170 PIRSF PIRSF006443 1 166 3.0E-66 T 28-03-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 AL549_RS10330 2b95b7701ef8f0433b5bf236c318b65d 170 Gene3D G3DSA:3.40.980.10 3 170 3.1E-33 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS10330 2b95b7701ef8f0433b5bf236c318b65d 170 SMART SM00852 14 158 2.9E-27 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS10330 2b95b7701ef8f0433b5bf236c318b65d 170 SUPERFAMILY SSF53218 7 168 5.63E-47 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS10330 2b95b7701ef8f0433b5bf236c318b65d 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 3.4E-34 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS10330 2b95b7701ef8f0433b5bf236c318b65d 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AL549_RS10330 2b95b7701ef8f0433b5bf236c318b65d 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 8.1E-85 T 28-03-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 AL549_RS06025 6a593bba16ccda19d068c14c20832ce5 787 SUPERFAMILY SSF55874 634 785 1.09E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS06025 6a593bba16ccda19d068c14c20832ce5 787 Gene3D G3DSA:1.10.287.130 539 629 4.8E-7 T 28-03-2018 AL549_RS06025 6a593bba16ccda19d068c14c20832ce5 787 Gene3D G3DSA:3.30.565.10 636 787 2.3E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS06025 6a593bba16ccda19d068c14c20832ce5 787 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 682 785 2.4E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS06025 6a593bba16ccda19d068c14c20832ce5 787 SMART SM00388 565 633 4.8E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS06025 6a593bba16ccda19d068c14c20832ce5 787 Pfam PF00512 His Kinase A (phospho-acceptor) domain 567 631 8.6E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS06025 6a593bba16ccda19d068c14c20832ce5 787 PIRSF PIRSF037119 1 787 0.0 T 28-03-2018 IPR017116 Signal transduction histidine kinase, PgtB AL549_RS06025 6a593bba16ccda19d068c14c20832ce5 787 SUPERFAMILY SSF47384 561 633 1.57E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS06025 6a593bba16ccda19d068c14c20832ce5 787 SMART SM00387 676 787 8.3E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS06025 6a593bba16ccda19d068c14c20832ce5 787 SMART SM00304 346 398 0.0015 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS06025 6a593bba16ccda19d068c14c20832ce5 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 747 765 6.7E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS06025 6a593bba16ccda19d068c14c20832ce5 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 736 746 6.7E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS06025 6a593bba16ccda19d068c14c20832ce5 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 771 784 6.7E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS06025 6a593bba16ccda19d068c14c20832ce5 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 718 732 6.7E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS06025 6a593bba16ccda19d068c14c20832ce5 787 Gene3D G3DSA:3.30.450.20 390 517 4.6E-7 T 28-03-2018 AL549_RS03345 7c163f51655673798027d3f8d90d09c7 157 Gene3D G3DSA:3.30.428.10 1 143 1.4E-30 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL549_RS03345 7c163f51655673798027d3f8d90d09c7 157 ProSitePatterns PS00892 HIT domain signature. 90 108 - T 28-03-2018 IPR019808 Histidine triad, conserved site AL549_RS03345 7c163f51655673798027d3f8d90d09c7 157 SUPERFAMILY SSF54197 5 146 1.84E-32 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL549_RS03345 7c163f51655673798027d3f8d90d09c7 157 Pfam PF01230 HIT domain 20 111 3.1E-18 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AL549_RS20975 98f17b9fee2d42ba618b2b0eb6663b30 182 SMART SM00738 6 115 3.2E-51 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL549_RS20975 98f17b9fee2d42ba618b2b0eb6663b30 182 SUPERFAMILY SSF82679 6 116 1.44E-40 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL549_RS20975 98f17b9fee2d42ba618b2b0eb6663b30 182 Gene3D G3DSA:3.30.70.940 6 119 7.7E-42 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL549_RS20975 98f17b9fee2d42ba618b2b0eb6663b30 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 1.1E-70 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL549_RS20975 98f17b9fee2d42ba618b2b0eb6663b30 182 Gene3D G3DSA:2.30.30.30 123 181 4.1E-20 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 AL549_RS20975 98f17b9fee2d42ba618b2b0eb6663b30 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 26.01 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL549_RS20975 98f17b9fee2d42ba618b2b0eb6663b30 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 28-03-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AL549_RS20975 98f17b9fee2d42ba618b2b0eb6663b30 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL549_RS20975 98f17b9fee2d42ba618b2b0eb6663b30 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL549_RS20975 98f17b9fee2d42ba618b2b0eb6663b30 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL549_RS20975 98f17b9fee2d42ba618b2b0eb6663b30 182 Pfam PF00467 KOW motif 130 162 2.3E-7 T 28-03-2018 IPR005824 KOW AL549_RS20975 98f17b9fee2d42ba618b2b0eb6663b30 182 SUPERFAMILY SSF50104 126 181 1.05E-19 T 28-03-2018 IPR008991 Translation protein SH3-like domain AL549_RS20975 98f17b9fee2d42ba618b2b0eb6663b30 182 Pfam PF02357 Transcription termination factor nusG 7 112 4.4E-27 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL549_RS20975 98f17b9fee2d42ba618b2b0eb6663b30 182 SMART SM00739 127 154 7.0E-5 T 28-03-2018 IPR005824 KOW AL549_RS18485 1379737e1f0c411ee034904ada437ff0 138 Gene3D G3DSA:3.40.50.10220 42 138 2.3E-27 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS18485 1379737e1f0c411ee034904ada437ff0 138 Pfam PF03603 DNA polymerase III psi subunit 8 135 1.4E-36 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS18485 1379737e1f0c411ee034904ada437ff0 138 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 41 134 5.0E-5 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS18485 1379737e1f0c411ee034904ada437ff0 138 PIRSF PIRSF029225 7 138 1.5E-48 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS18485 1379737e1f0c411ee034904ada437ff0 138 SUPERFAMILY SSF102220 35 138 8.76E-31 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS19015 460d1d8cbc8fbc83b90b9d3e8c22e0c8 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 1.5E-20 T 28-03-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AL549_RS19015 460d1d8cbc8fbc83b90b9d3e8c22e0c8 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 36.329 T 28-03-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AL549_RS19015 460d1d8cbc8fbc83b90b9d3e8c22e0c8 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 81 1.6E-21 T 28-03-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AL549_RS18500 15a8aa586565a4635a74109d14e558ab 679 Pfam PF13188 PAS domain 132 183 9.7E-7 T 28-03-2018 IPR000014 PAS domain AL549_RS18500 15a8aa586565a4635a74109d14e558ab 679 Gene3D G3DSA:3.20.20.450 419 679 5.2E-96 T 28-03-2018 IPR001633 EAL domain AL549_RS18500 15a8aa586565a4635a74109d14e558ab 679 Pfam PF08448 PAS fold 15 120 6.2E-9 T 28-03-2018 IPR013656 PAS fold-4 AL549_RS18500 15a8aa586565a4635a74109d14e558ab 679 Gene3D G3DSA:3.30.450.20 120 238 2.6E-9 T 28-03-2018 AL549_RS18500 15a8aa586565a4635a74109d14e558ab 679 SMART SM00052 420 666 3.1E-104 T 28-03-2018 IPR001633 EAL domain AL549_RS18500 15a8aa586565a4635a74109d14e558ab 679 SUPERFAMILY SSF55785 13 118 3.66E-10 T 28-03-2018 IPR000014 PAS domain AL549_RS18500 15a8aa586565a4635a74109d14e558ab 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 120 6.8E-9 T 28-03-2018 IPR000014 PAS domain AL549_RS18500 15a8aa586565a4635a74109d14e558ab 679 SUPERFAMILY SSF55785 118 201 2.27E-7 T 28-03-2018 IPR000014 PAS domain AL549_RS18500 15a8aa586565a4635a74109d14e558ab 679 SUPERFAMILY SSF55073 258 412 1.49E-45 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS18500 15a8aa586565a4635a74109d14e558ab 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 406 5.0E-42 T 28-03-2018 IPR000160 GGDEF domain AL549_RS18500 15a8aa586565a4635a74109d14e558ab 679 Gene3D G3DSA:3.30.450.20 3 119 2.4E-12 T 28-03-2018 AL549_RS18500 15a8aa586565a4635a74109d14e558ab 679 SUPERFAMILY SSF141868 427 674 1.57E-84 T 28-03-2018 IPR001633 EAL domain AL549_RS18500 15a8aa586565a4635a74109d14e558ab 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 407 8.8E-36 T 28-03-2018 IPR000160 GGDEF domain AL549_RS18500 15a8aa586565a4635a74109d14e558ab 679 Pfam PF00563 EAL domain 427 661 3.6E-72 T 28-03-2018 IPR001633 EAL domain AL549_RS18500 15a8aa586565a4635a74109d14e558ab 679 SMART SM00091 8 74 1.2E-4 T 28-03-2018 IPR000014 PAS domain AL549_RS18500 15a8aa586565a4635a74109d14e558ab 679 SMART SM00091 131 197 0.012 T 28-03-2018 IPR000014 PAS domain AL549_RS18500 15a8aa586565a4635a74109d14e558ab 679 Gene3D G3DSA:3.30.70.270 254 418 1.8E-52 T 28-03-2018 AL549_RS18500 15a8aa586565a4635a74109d14e558ab 679 SMART SM00267 238 410 1.3E-51 T 28-03-2018 IPR000160 GGDEF domain AL549_RS17725 76356da9b72b07192613476f2045dd71 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 44.695 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL549_RS17725 76356da9b72b07192613476f2045dd71 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 2.8E-26 T 28-03-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL549_RS17725 76356da9b72b07192613476f2045dd71 252 SUPERFAMILY SSF56281 2 252 3.14E-70 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS17725 76356da9b72b07192613476f2045dd71 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 1.1E-102 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL549_RS17725 76356da9b72b07192613476f2045dd71 252 PIRSF PIRSF005457 1 252 5.1E-97 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL549_RS17725 76356da9b72b07192613476f2045dd71 252 SMART SM00849 12 166 1.8E-32 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS17725 76356da9b72b07192613476f2045dd71 252 Gene3D G3DSA:3.60.15.10 1 252 1.1E-72 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS17725 76356da9b72b07192613476f2045dd71 252 Pfam PF00753 Metallo-beta-lactamase superfamily 14 166 1.0E-19 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS17095 b7940d26b0484333510f6c46c508a6e4 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 4.2E-14 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AL549_RS17095 b7940d26b0484333510f6c46c508a6e4 97 SUPERFAMILY SSF54909 1 92 5.37E-27 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL549_RS17095 b7940d26b0484333510f6c46c508a6e4 97 Gene3D G3DSA:3.30.70.100 1 93 1.6E-21 T 28-03-2018 AL549_RS20050 938c23feb2234aa067d34f57176a6ecc 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.8E-55 T 28-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS20050 938c23feb2234aa067d34f57176a6ecc 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 6.6E-22 T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20050 938c23feb2234aa067d34f57176a6ecc 149 SUPERFAMILY SSF55658 1 57 1.52E-19 T 28-03-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AL549_RS20050 938c23feb2234aa067d34f57176a6ecc 149 SUPERFAMILY SSF55653 60 149 7.06E-26 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal AL549_RS20050 938c23feb2234aa067d34f57176a6ecc 149 Gene3D G3DSA:3.10.430.100 63 148 9.3E-26 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal AL549_RS20050 938c23feb2234aa067d34f57176a6ecc 149 Gene3D G3DSA:3.40.5.10 1 49 1.0E-22 T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20050 938c23feb2234aa067d34f57176a6ecc 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20050 938c23feb2234aa067d34f57176a6ecc 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.707 T 28-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS20050 938c23feb2234aa067d34f57176a6ecc 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 3.2E-25 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal AL549_RS04295 994c9bc41b94d9b1304f993a15da4d1b 138 Gene3D G3DSA:1.10.10.10 1 138 2.5E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS04295 994c9bc41b94d9b1304f993a15da4d1b 138 SUPERFAMILY SSF46785 6 136 7.01E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS04295 994c9bc41b94d9b1304f993a15da4d1b 138 Pfam PF01047 MarR family 32 88 7.4E-15 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS04295 994c9bc41b94d9b1304f993a15da4d1b 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 3.9E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS04295 994c9bc41b94d9b1304f993a15da4d1b 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 3.9E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS04295 994c9bc41b94d9b1304f993a15da4d1b 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 3.9E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS04295 994c9bc41b94d9b1304f993a15da4d1b 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 3.9E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS04295 994c9bc41b94d9b1304f993a15da4d1b 138 SMART SM00347 24 124 3.2E-21 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS20660 4922c568f20539545a355063c71eb246 605 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 1.0E-9 T 28-03-2018 AL549_RS20660 4922c568f20539545a355063c71eb246 605 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.0E-9 T 28-03-2018 AL549_RS20660 4922c568f20539545a355063c71eb246 605 Gene3D G3DSA:1.20.58.100 423 541 2.1E-29 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS20660 4922c568f20539545a355063c71eb246 605 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 28-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS20660 4922c568f20539545a355063c71eb246 605 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.5E-37 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS20660 4922c568f20539545a355063c71eb246 605 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 4 582 0.0 T 28-03-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 AL549_RS20660 4922c568f20539545a355063c71eb246 605 Pfam PF00890 FAD binding domain 7 397 2.9E-114 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS20660 4922c568f20539545a355063c71eb246 605 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.5E-5 T 28-03-2018 AL549_RS20660 4922c568f20539545a355063c71eb246 605 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.5E-5 T 28-03-2018 AL549_RS20660 4922c568f20539545a355063c71eb246 605 Gene3D G3DSA:3.50.50.60 1 240 1.7E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS20660 4922c568f20539545a355063c71eb246 605 PIRSF PIRSF000171 1 575 1.1E-44 T 28-03-2018 AL549_RS20660 4922c568f20539545a355063c71eb246 605 SUPERFAMILY SSF51905 3 250 2.74E-74 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS20660 4922c568f20539545a355063c71eb246 605 SUPERFAMILY SSF51905 361 439 2.74E-74 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS20660 4922c568f20539545a355063c71eb246 605 SUPERFAMILY SSF56425 227 358 3.74E-41 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS20660 4922c568f20539545a355063c71eb246 605 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 4.4E-236 T 28-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS20660 4922c568f20539545a355063c71eb246 605 SUPERFAMILY SSF46977 444 582 9.03E-43 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS20660 4922c568f20539545a355063c71eb246 605 Gene3D G3DSA:4.10.80.40 543 576 9.3E-11 T 28-03-2018 AL549_RS20660 4922c568f20539545a355063c71eb246 605 Gene3D G3DSA:3.90.700.10 241 352 1.1E-28 T 28-03-2018 AL549_RS07015 bf0a9983920a2336623e8bc784169be4 261 Gene3D G3DSA:1.10.510.10 20 193 6.1E-24 T 28-03-2018 AL549_RS07015 bf0a9983920a2336623e8bc784169be4 261 Pfam PF01636 Phosphotransferase enzyme family 106 164 7.7E-14 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase AL549_RS07015 bf0a9983920a2336623e8bc784169be4 261 SUPERFAMILY SSF56112 8 209 6.12E-30 T 28-03-2018 IPR011009 Protein kinase-like domain AL549_RS18515 5a881b9b0c9f03e4f0bbb7c0a34e9375 444 TIGRFAM TIGR00797 matE: MATE efflux family protein 16 411 8.9E-48 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS18515 5a881b9b0c9f03e4f0bbb7c0a34e9375 444 Pfam PF01554 MatE 241 399 4.5E-9 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS18515 5a881b9b0c9f03e4f0bbb7c0a34e9375 444 Pfam PF01554 MatE 16 177 8.0E-26 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS18515 5a881b9b0c9f03e4f0bbb7c0a34e9375 444 PIRSF PIRSF006603 1 442 2.4E-66 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS02185 80b28fce7a569b46ef27a2131c7b9afc 272 SUPERFAMILY SSF46689 220 269 6.72E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS02185 80b28fce7a569b46ef27a2131c7b9afc 272 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 220 262 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL549_RS02185 80b28fce7a569b46ef27a2131c7b9afc 272 SUPERFAMILY SSF46689 170 216 5.38E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS02185 80b28fce7a569b46ef27a2131c7b9afc 272 SMART SM00342 183 266 2.1E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS02185 80b28fce7a569b46ef27a2131c7b9afc 272 Gene3D G3DSA:1.10.10.60 220 272 8.1E-12 T 28-03-2018 AL549_RS02185 80b28fce7a569b46ef27a2131c7b9afc 272 Gene3D G3DSA:1.10.10.60 159 219 1.8E-11 T 28-03-2018 AL549_RS02185 80b28fce7a569b46ef27a2131c7b9afc 272 Pfam PF12833 Helix-turn-helix domain 189 267 2.7E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS02185 80b28fce7a569b46ef27a2131c7b9afc 272 SUPERFAMILY SSF51215 30 133 2.48E-5 T 28-03-2018 AL549_RS02185 80b28fce7a569b46ef27a2131c7b9afc 272 Gene3D G3DSA:2.60.120.280 22 158 7.3E-8 T 28-03-2018 AL549_RS02185 80b28fce7a569b46ef27a2131c7b9afc 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 9.5E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS02185 80b28fce7a569b46ef27a2131c7b9afc 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 9.5E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS12440 ec985af9888824caf960ab7a5f83204c 568 Pfam PF11949 Protein of unknown function (DUF3466) 7 179 4.5E-11 T 28-03-2018 IPR022562 Protein of unknown function DUF3466 AL549_RS12440 ec985af9888824caf960ab7a5f83204c 568 Pfam PF11949 Protein of unknown function (DUF3466) 234 568 1.6E-54 T 28-03-2018 IPR022562 Protein of unknown function DUF3466 AL549_RS12440 ec985af9888824caf960ab7a5f83204c 568 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 548 568 0.0016 T 28-03-2018 IPR020008 GlyGly-CTERM domain AL549_RS21190 6c285cc91db329f1762b2ff5516a3668 225 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 3.6E-90 T 28-03-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 AL549_RS21190 6c285cc91db329f1762b2ff5516a3668 225 Gene3D G3DSA:3.40.50.300 1 223 2.1E-61 T 28-03-2018 AL549_RS21190 6c285cc91db329f1762b2ff5516a3668 225 SMART SM00382 27 214 6.0E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS21190 6c285cc91db329f1762b2ff5516a3668 225 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS21190 6c285cc91db329f1762b2ff5516a3668 225 SUPERFAMILY SSF52540 1 220 1.46E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS21190 6c285cc91db329f1762b2ff5516a3668 225 Pfam PF00005 ABC transporter 18 165 9.8E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS11805 084ad18e8dd0818642c8ee236ac466ec 339 Gene3D G3DSA:3.90.850.10 26 323 3.5E-51 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL549_RS11805 084ad18e8dd0818642c8ee236ac466ec 339 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 333 1.6E-40 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL549_RS11805 084ad18e8dd0818642c8ee236ac466ec 339 SUPERFAMILY SSF56529 77 333 4.06E-56 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL549_RS07850 79e4114eb2485ab03389755fb2f461e7 271 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AL549_RS07850 79e4114eb2485ab03389755fb2f461e7 271 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.225 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AL549_RS07850 79e4114eb2485ab03389755fb2f461e7 271 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 2.5E-83 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AL549_RS07850 79e4114eb2485ab03389755fb2f461e7 271 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 263 2.4E-92 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AL549_RS21650 4cdb7c73d8f717f8b3691139f8c43b8c 387 SUPERFAMILY SSF53901 1 258 7.86E-80 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS21650 4cdb7c73d8f717f8b3691139f8c43b8c 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.743 T 28-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AL549_RS21650 4cdb7c73d8f717f8b3691139f8c43b8c 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 6.0E-143 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL549_RS21650 4cdb7c73d8f717f8b3691139f8c43b8c 387 SUPERFAMILY SSF53901 263 386 1.12E-44 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS21650 4cdb7c73d8f717f8b3691139f8c43b8c 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AL549_RS21650 4cdb7c73d8f717f8b3691139f8c43b8c 387 Gene3D G3DSA:3.40.47.10 258 384 7.2E-34 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS21650 4cdb7c73d8f717f8b3691139f8c43b8c 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AL549_RS21650 4cdb7c73d8f717f8b3691139f8c43b8c 387 PIRSF PIRSF000429 1 387 2.2E-133 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL549_RS21650 4cdb7c73d8f717f8b3691139f8c43b8c 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 5.0E-84 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL549_RS21650 4cdb7c73d8f717f8b3691139f8c43b8c 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 9.7E-50 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL549_RS21650 4cdb7c73d8f717f8b3691139f8c43b8c 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AL549_RS21650 4cdb7c73d8f717f8b3691139f8c43b8c 387 Gene3D G3DSA:3.40.47.10 1 257 6.5E-53 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS21650 4cdb7c73d8f717f8b3691139f8c43b8c 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 1.8E-244 T 28-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AL549_RS03550 e91954487bbfcdd63bcd86a4e228ff8d 260 SMART SM00849 17 216 6.0E-20 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS03550 e91954487bbfcdd63bcd86a4e228ff8d 260 SUPERFAMILY SSF56281 6 239 7.6E-38 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS03550 e91954487bbfcdd63bcd86a4e228ff8d 260 Pfam PF00753 Metallo-beta-lactamase superfamily 20 216 2.5E-18 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS03550 e91954487bbfcdd63bcd86a4e228ff8d 260 Gene3D G3DSA:3.60.15.10 4 247 3.6E-28 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS10425 621cd2e8a76f81a4d5bc1072df631ca0 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 330 2.0E-127 T 28-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AL549_RS10425 621cd2e8a76f81a4d5bc1072df631ca0 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 62 1.4E-15 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS10425 621cd2e8a76f81a4d5bc1072df631ca0 332 Gene3D G3DSA:3.40.1030.10 68 332 1.3E-95 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS10425 621cd2e8a76f81a4d5bc1072df631ca0 332 SUPERFAMILY SSF47648 2 67 2.35E-17 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS10425 621cd2e8a76f81a4d5bc1072df631ca0 332 Pfam PF00591 Glycosyl transferase family, a/b domain 72 322 1.6E-103 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS10425 621cd2e8a76f81a4d5bc1072df631ca0 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 39.381 T 28-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AL549_RS10425 621cd2e8a76f81a4d5bc1072df631ca0 332 SUPERFAMILY SSF52418 70 329 1.24E-93 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS10425 621cd2e8a76f81a4d5bc1072df631ca0 332 Gene3D G3DSA:1.20.970.10 3 67 1.0E-16 T 28-03-2018 AL549_RS02895 fdc11de797dd9c7f49e0eb1d98813f1e 178 SUPERFAMILY SSF48452 2 174 8.34E-68 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS02895 fdc11de797dd9c7f49e0eb1d98813f1e 178 Gene3D G3DSA:1.25.40.10 78 178 1.3E-36 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS02895 fdc11de797dd9c7f49e0eb1d98813f1e 178 Pfam PF06041 Bacterial protein of unknown function (DUF924) 5 175 5.4E-63 T 28-03-2018 IPR010323 Protein of unknown function DUF924 AL549_RS02895 fdc11de797dd9c7f49e0eb1d98813f1e 178 Gene3D G3DSA:1.20.58.320 1 77 1.4E-25 T 28-03-2018 AL549_RS20885 60adfb448d4585a7dca61a8a4fc31607 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.2E-34 T 28-03-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL549_RS20885 60adfb448d4585a7dca61a8a4fc31607 429 SUPERFAMILY SSF56059 104 322 1.73E-69 T 28-03-2018 AL549_RS20885 60adfb448d4585a7dca61a8a4fc31607 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.274 T 28-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL549_RS20885 60adfb448d4585a7dca61a8a4fc31607 429 Gene3D G3DSA:3.40.50.20 2 95 2.5E-36 T 28-03-2018 AL549_RS20885 60adfb448d4585a7dca61a8a4fc31607 429 SUPERFAMILY SSF51246 329 424 4.29E-33 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL549_RS20885 60adfb448d4585a7dca61a8a4fc31607 429 Gene3D G3DSA:3.30.470.20 191 329 1.0E-63 T 28-03-2018 AL549_RS20885 60adfb448d4585a7dca61a8a4fc31607 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 7.4E-83 T 28-03-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL549_RS20885 60adfb448d4585a7dca61a8a4fc31607 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 28-03-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL549_RS20885 60adfb448d4585a7dca61a8a4fc31607 429 SUPERFAMILY SSF52440 1 103 3.74E-36 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL549_RS20885 60adfb448d4585a7dca61a8a4fc31607 429 Gene3D G3DSA:3.30.1490.20 134 189 1.8E-24 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL549_RS20885 60adfb448d4585a7dca61a8a4fc31607 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 1.6E-29 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL549_RS20885 60adfb448d4585a7dca61a8a4fc31607 429 SMART SM01209 103 296 2.7E-143 T 28-03-2018 AL549_RS20885 60adfb448d4585a7dca61a8a4fc31607 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 4.0E-186 T 28-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL549_RS20885 60adfb448d4585a7dca61a8a4fc31607 429 SMART SM01210 330 423 6.3E-55 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL549_RS20885 60adfb448d4585a7dca61a8a4fc31607 429 Gene3D G3DSA:3.90.600.10 330 423 7.3E-35 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL549_RS08185 600e2825480cd0cd8f87af63cb5b385d 378 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 370 1.3E-178 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL549_RS08185 600e2825480cd0cd8f87af63cb5b385d 378 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 371 2.3E-187 T 28-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL549_RS08185 600e2825480cd0cd8f87af63cb5b385d 378 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 1.2E-96 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL549_RS08185 600e2825480cd0cd8f87af63cb5b385d 378 SUPERFAMILY SSF51713 3 366 1.96E-164 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL549_RS08185 600e2825480cd0cd8f87af63cb5b385d 378 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 366 57.61 T 28-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL549_RS08185 600e2825480cd0cd8f87af63cb5b385d 378 Gene3D G3DSA:3.20.20.105 1 371 2.8E-162 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL549_RS07670 3595d99948f72475655c1dec966a26ba 318 Pfam PF16199 Radical_SAM C-terminal domain 209 279 9.8E-18 T 28-03-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 AL549_RS07670 3595d99948f72475655c1dec966a26ba 318 SUPERFAMILY SSF102114 13 268 2.09E-49 T 28-03-2018 AL549_RS07670 3595d99948f72475655c1dec966a26ba 318 Gene3D G3DSA:3.20.20.70 1 310 4.2E-37 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS07670 3595d99948f72475655c1dec966a26ba 318 Pfam PF04055 Radical SAM superfamily 43 198 4.8E-16 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS07670 3595d99948f72475655c1dec966a26ba 318 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 300 7.8E-136 T 28-03-2018 IPR005911 Protein YhcC-like GO:0051536 AL549_RS07670 3595d99948f72475655c1dec966a26ba 318 SMART SM00729 23 247 1.7E-43 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL549_RS04515 0e05b089c75554c4fc7c66d08bba9cdb 299 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 15 296 19.435 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AL549_RS04515 0e05b089c75554c4fc7c66d08bba9cdb 299 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 18 294 8.8E-98 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AL549_RS04515 0e05b089c75554c4fc7c66d08bba9cdb 299 Pfam PF01040 UbiA prenyltransferase family 32 277 3.5E-63 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AL549_RS04515 0e05b089c75554c4fc7c66d08bba9cdb 299 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 28-03-2018 IPR030470 UbiA prenyltransferase conserved site AL549_RS07460 55ce84a55994a23a86002adb8008ea26 245 Pfam PF02167 Cytochrome C1 family 34 244 3.6E-17 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AL549_RS07460 55ce84a55994a23a86002adb8008ea26 245 Gene3D G3DSA:1.20.5.100 213 245 1.4E-14 T 28-03-2018 AL549_RS07460 55ce84a55994a23a86002adb8008ea26 245 SUPERFAMILY SSF46626 17 208 1.72E-49 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS07460 55ce84a55994a23a86002adb8008ea26 245 Gene3D G3DSA:1.10.760.10 26 210 2.4E-55 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS07460 55ce84a55994a23a86002adb8008ea26 245 PRINTS PR00603 Cytochrome C1 signature 105 129 9.6E-8 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AL549_RS07460 55ce84a55994a23a86002adb8008ea26 245 PRINTS PR00603 Cytochrome C1 signature 191 210 9.6E-8 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AL549_RS07460 55ce84a55994a23a86002adb8008ea26 245 PRINTS PR00603 Cytochrome C1 signature 42 61 9.6E-8 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AL549_RS07460 55ce84a55994a23a86002adb8008ea26 245 PRINTS PR00603 Cytochrome C1 signature 210 225 9.6E-8 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AL549_RS10580 dc6fcca53e8b402e685ac6422aac4d5d 903 SUPERFAMILY SSF56719 30 520 1.11E-187 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL549_RS10580 dc6fcca53e8b402e685ac6422aac4d5d 903 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 865 24.654 T 28-03-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS10580 dc6fcca53e8b402e685ac6422aac4d5d 903 Gene3D G3DSA:3.90.199.10 34 284 1.7E-118 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AL549_RS10580 dc6fcca53e8b402e685ac6422aac4d5d 903 Gene3D G3DSA:2.120.10.90 532 881 2.1E-131 T 28-03-2018 AL549_RS10580 dc6fcca53e8b402e685ac6422aac4d5d 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 767 813 7.4E-14 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL549_RS10580 dc6fcca53e8b402e685ac6422aac4d5d 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 709 0.64 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL549_RS10580 dc6fcca53e8b402e685ac6422aac4d5d 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 817 863 1.6E-12 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL549_RS10580 dc6fcca53e8b402e685ac6422aac4d5d 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 8.3E-11 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL549_RS10580 dc6fcca53e8b402e685ac6422aac4d5d 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 4.3E-7 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL549_RS10580 dc6fcca53e8b402e685ac6422aac4d5d 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 3.2E-8 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL549_RS10580 dc6fcca53e8b402e685ac6422aac4d5d 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 735 761 1.8E-6 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL549_RS10580 dc6fcca53e8b402e685ac6422aac4d5d 903 Gene3D G3DSA:3.90.199.10 285 374 1.2E-9 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AL549_RS10580 dc6fcca53e8b402e685ac6422aac4d5d 903 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 863 0.0 T 28-03-2018 AL549_RS10580 dc6fcca53e8b402e685ac6422aac4d5d 903 SUPERFAMILY SSF101904 532 874 1.03E-105 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AL549_RS10580 dc6fcca53e8b402e685ac6422aac4d5d 903 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.7E-158 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS10580 dc6fcca53e8b402e685ac6422aac4d5d 903 Gene3D G3DSA:1.10.268.10 375 496 6.1E-49 T 28-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS10580 dc6fcca53e8b402e685ac6422aac4d5d 903 SMART SM00434 11 498 5.0E-302 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS09070 9c3fdbac65f6ccd1ef4630119fcb605d 149 Pfam PF04214 Protein of unknown function, DUF 48 118 8.3E-29 T 28-03-2018 IPR007332 Protein of unknown function DUF411 AL549_RS10710 cd5614e9ff46a2e9b7c9675398c65961 307 Gene3D G3DSA:3.40.366.10 185 307 3.5E-31 T 28-03-2018 AL549_RS10710 cd5614e9ff46a2e9b7c9675398c65961 307 Gene3D G3DSA:3.40.366.10 1 184 4.7E-52 T 28-03-2018 AL549_RS10710 cd5614e9ff46a2e9b7c9675398c65961 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 1.8E-127 T 28-03-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AL549_RS10710 cd5614e9ff46a2e9b7c9675398c65961 307 Pfam PF00698 Acyl transferase domain 7 297 1.5E-36 T 28-03-2018 IPR014043 Acyl transferase AL549_RS10710 cd5614e9ff46a2e9b7c9675398c65961 307 SUPERFAMILY SSF52151 190 305 2.07E-81 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL549_RS10710 cd5614e9ff46a2e9b7c9675398c65961 307 SUPERFAMILY SSF52151 4 122 2.07E-81 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL549_RS10710 cd5614e9ff46a2e9b7c9675398c65961 307 PIRSF PIRSF000446 1 307 2.2E-137 T 28-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AL549_RS10710 cd5614e9ff46a2e9b7c9675398c65961 307 SUPERFAMILY SSF55048 128 197 1.23E-18 T 28-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AL549_RS10710 cd5614e9ff46a2e9b7c9675398c65961 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 306 7.2E-41 T 28-03-2018 IPR020801 Polyketide synthase, acyl transferase domain AL549_RS03210 73241dbdce3f209963762d019eb2dfae 106 PIRSF PIRSF029883 1 106 1.9E-37 T 28-03-2018 IPR025499 Pectin degradation protein KdgF AL549_RS03210 73241dbdce3f209963762d019eb2dfae 106 Gene3D G3DSA:2.60.120.10 1 106 2.1E-21 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS03210 73241dbdce3f209963762d019eb2dfae 106 SUPERFAMILY SSF51182 10 104 4.59E-23 T 28-03-2018 IPR011051 RmlC-like cupin domain AL549_RS03210 73241dbdce3f209963762d019eb2dfae 106 Pfam PF07883 Cupin domain 32 87 2.8E-14 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL549_RS09485 2d18228f54f593bc4b03cce3d413cd04 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS09485 2d18228f54f593bc4b03cce3d413cd04 236 Gene3D G3DSA:1.10.1060.10 105 236 4.2E-30 T 28-03-2018 AL549_RS09485 2d18228f54f593bc4b03cce3d413cd04 236 SUPERFAMILY SSF54292 1 104 1.78E-29 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL549_RS09485 2d18228f54f593bc4b03cce3d413cd04 236 SUPERFAMILY SSF46548 105 233 8.72E-40 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL549_RS09485 2d18228f54f593bc4b03cce3d413cd04 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 228 2.8E-85 T 28-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS09485 2d18228f54f593bc4b03cce3d413cd04 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 1.4E-10 T 28-03-2018 AL549_RS09485 2d18228f54f593bc4b03cce3d413cd04 236 Gene3D G3DSA:3.10.20.30 1 104 6.5E-32 T 28-03-2018 IPR012675 Beta-grasp domain AL549_RS09485 2d18228f54f593bc4b03cce3d413cd04 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 5.6E-30 T 28-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS11890 c0bde5b684c6e1b099190edcb75c0493 434 Gene3D G3DSA:3.40.190.10 26 159 3.8E-13 T 28-03-2018 AL549_RS11890 c0bde5b684c6e1b099190edcb75c0493 434 SUPERFAMILY SSF53850 26 421 9.83E-69 T 28-03-2018 AL549_RS11890 c0bde5b684c6e1b099190edcb75c0493 434 Pfam PF13416 Bacterial extracellular solute-binding protein 45 367 2.4E-38 T 28-03-2018 AL549_RS11890 c0bde5b684c6e1b099190edcb75c0493 434 Gene3D G3DSA:3.40.190.10 160 364 3.2E-37 T 28-03-2018 AL549_RS11890 c0bde5b684c6e1b099190edcb75c0493 434 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 141 158 - T 28-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 Gene3D G3DSA:3.30.420.40 211 360 7.2E-37 T 28-03-2018 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 SUPERFAMILY SSF53067 20 196 3.37E-50 T 28-03-2018 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 Gene3D G3DSA:1.20.1270.10 529 616 4.8E-14 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 Gene3D G3DSA:3.30.420.40 18 210 5.8E-58 T 28-03-2018 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 Gene3D G3DSA:2.60.34.10 387 528 4.1E-50 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 SUPERFAMILY SSF100934 504 615 6.08E-34 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 1.0E-52 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.0E-52 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 1.0E-52 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 1.0E-52 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.0E-52 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 1.0E-52 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.0E-52 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.0E-52 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 46.382 T 28-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 SUPERFAMILY SSF100920 384 537 4.58E-52 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 SUPERFAMILY SSF53067 200 377 3.41E-49 T 28-03-2018 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 Pfam PF00012 Hsp70 protein 22 601 1.5E-187 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL549_RS08250 c445d1bfaf0f5b9500cbe6d360570fdd 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 8.2E-267 T 28-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AL549_RS11625 6fb2fa97579b3712df5e160f02ead2e8 442 SUPERFAMILY SSF49785 40 212 3.23E-16 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS11625 6fb2fa97579b3712df5e160f02ead2e8 442 SMART SM00267 264 431 5.0E-49 T 28-03-2018 IPR000160 GGDEF domain AL549_RS11625 6fb2fa97579b3712df5e160f02ead2e8 442 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 273 431 2.9E-42 T 28-03-2018 IPR000160 GGDEF domain AL549_RS11625 6fb2fa97579b3712df5e160f02ead2e8 442 Pfam PF00990 Diguanylate cyclase, GGDEF domain 275 427 6.8E-39 T 28-03-2018 IPR000160 GGDEF domain AL549_RS11625 6fb2fa97579b3712df5e160f02ead2e8 442 Gene3D G3DSA:3.30.70.270 258 431 5.9E-47 T 28-03-2018 AL549_RS11625 6fb2fa97579b3712df5e160f02ead2e8 442 SUPERFAMILY SSF55073 280 430 1.33E-39 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS11625 6fb2fa97579b3712df5e160f02ead2e8 442 Gene3D G3DSA:2.60.120.430 34 213 3.0E-10 T 28-03-2018 AL549_RS06815 9aec7f4d606d1143899923232bdb43d7 595 Gene3D G3DSA:3.10.450.40 112 178 5.5E-4 T 28-03-2018 AL549_RS06815 9aec7f4d606d1143899923232bdb43d7 595 SUPERFAMILY SSF55486 180 489 9.52E-75 T 28-03-2018 AL549_RS06815 9aec7f4d606d1143899923232bdb43d7 595 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 333 489 2.6E-40 T 28-03-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 AL549_RS06815 9aec7f4d606d1143899923232bdb43d7 595 Gene3D G3DSA:3.10.170.10 180 334 6.8E-35 T 28-03-2018 AL549_RS06815 9aec7f4d606d1143899923232bdb43d7 595 Gene3D G3DSA:1.10.390.10 335 490 1.7E-42 T 28-03-2018 AL549_RS06815 9aec7f4d606d1143899923232bdb43d7 595 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 181 330 2.0E-35 T 28-03-2018 IPR013856 Peptidase M4 domain GO:0004222 AL549_RS06815 9aec7f4d606d1143899923232bdb43d7 595 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 285 305 5.9E-25 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL549_RS06815 9aec7f4d606d1143899923232bdb43d7 595 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 342 353 5.9E-25 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL549_RS06815 9aec7f4d606d1143899923232bdb43d7 595 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 321 337 5.9E-25 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL549_RS06815 9aec7f4d606d1143899923232bdb43d7 595 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 406 422 5.9E-25 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL549_RS00640 6e658534b5f0cc5e12986d50dfbecf94 296 Pfam PF03466 LysR substrate binding domain 93 291 4.8E-24 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS00640 6e658534b5f0cc5e12986d50dfbecf94 296 SUPERFAMILY SSF53850 93 292 1.54E-27 T 28-03-2018 AL549_RS00640 6e658534b5f0cc5e12986d50dfbecf94 296 Gene3D G3DSA:3.40.190.10 178 264 7.7E-15 T 28-03-2018 AL549_RS00640 6e658534b5f0cc5e12986d50dfbecf94 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.2E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS00640 6e658534b5f0cc5e12986d50dfbecf94 296 Gene3D G3DSA:1.10.10.10 1 87 1.3E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00640 6e658534b5f0cc5e12986d50dfbecf94 296 SUPERFAMILY SSF46785 6 113 5.17E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00640 6e658534b5f0cc5e12986d50dfbecf94 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.5E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS00640 6e658534b5f0cc5e12986d50dfbecf94 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.5E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS00640 6e658534b5f0cc5e12986d50dfbecf94 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.5E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS00640 6e658534b5f0cc5e12986d50dfbecf94 296 Gene3D G3DSA:3.40.190.10 92 177 1.5E-11 T 28-03-2018 AL549_RS07520 50e4f464a2a9543e32d03aaa2a333ac6 493 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 421 1.7E-24 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL549_RS07520 50e4f464a2a9543e32d03aaa2a333ac6 493 Gene3D G3DSA:3.40.1390.10 5 107 2.8E-21 T 28-03-2018 AL549_RS07520 50e4f464a2a9543e32d03aaa2a333ac6 493 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 489 34.805 T 28-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AL549_RS07520 50e4f464a2a9543e32d03aaa2a333ac6 493 SUPERFAMILY SSF53244 338 489 2.44E-50 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL549_RS07520 50e4f464a2a9543e32d03aaa2a333ac6 493 SUPERFAMILY SSF53623 109 335 7.85E-74 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL549_RS07520 50e4f464a2a9543e32d03aaa2a333ac6 493 Gene3D G3DSA:3.90.190.20 342 492 2.5E-48 T 28-03-2018 AL549_RS07520 50e4f464a2a9543e32d03aaa2a333ac6 493 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 489 3.6E-175 T 28-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AL549_RS07520 50e4f464a2a9543e32d03aaa2a333ac6 493 Pfam PF01225 Mur ligase family, catalytic domain 25 103 2.5E-13 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL549_RS07520 50e4f464a2a9543e32d03aaa2a333ac6 493 Gene3D G3DSA:3.40.1190.10 108 341 1.4E-53 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL549_RS07520 50e4f464a2a9543e32d03aaa2a333ac6 493 SUPERFAMILY SSF63418 5 107 1.44E-22 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL549_RS07520 50e4f464a2a9543e32d03aaa2a333ac6 493 Pfam PF08245 Mur ligase middle domain 115 316 3.9E-53 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL549_RS01635 399695e745fe882039016811a7368f69 353 Pfam PF03193 RsgA GTPase 85 258 3.3E-49 T 28-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AL549_RS01635 399695e745fe882039016811a7368f69 353 SUPERFAMILY SSF52540 103 319 1.27E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS01635 399695e745fe882039016811a7368f69 353 Gene3D G3DSA:3.40.50.300 98 258 1.1E-23 T 28-03-2018 AL549_RS01635 399695e745fe882039016811a7368f69 353 Gene3D G3DSA:1.10.40.50 261 327 7.8E-20 T 28-03-2018 AL549_RS01635 399695e745fe882039016811a7368f69 353 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 35 322 31.836 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AL549_RS01635 399695e745fe882039016811a7368f69 353 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 69 314 1.8E-48 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 Gene3D G3DSA:3.30.70.20 695 725 6.6E-5 T 28-03-2018 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 Pfam PF12838 4Fe-4S dicluster domain 634 700 1.4E-6 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 SUPERFAMILY SSF54862 566 706 2.93E-22 T 28-03-2018 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 720 1390 2.8E-245 T 28-03-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 Pfam PF01568 Molydopterin dinucleotide binding domain 1282 1386 4.0E-30 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 Gene3D G3DSA:3.40.50.720 191 282 4.1E-14 T 28-03-2018 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 1145 1162 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 Gene3D G3DSA:3.30.70.20 657 694 1.6E-6 T 28-03-2018 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 686 697 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 96 175 8.5E-18 T 28-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 Gene3D G3DSA:1.10.1060.10 57 190 4.1E-27 T 28-03-2018 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 Gene3D G3DSA:1.10.1060.10 520 656 3.6E-15 T 28-03-2018 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 SUPERFAMILY SSF54292 1 98 4.85E-27 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 75 1.7E-11 T 28-03-2018 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 Gene3D G3DSA:3.50.50.60 336 509 6.2E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 191 488 1.5E-29 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 SUPERFAMILY SSF46548 89 200 2.3E-17 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 Gene3D G3DSA:3.40.50.740 774 971 1.5E-47 T 28-03-2018 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 SMART SM00926 715 770 1.2E-18 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 Pfam PF00384 Molybdopterin oxidoreductase 773 1199 2.9E-88 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 SUPERFAMILY SSF50692 1250 1392 1.81E-42 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 Gene3D G3DSA:3.40.50.740 972 1241 2.3E-83 T 28-03-2018 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 716 769 7.8E-17 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 Gene3D G3DSA:2.40.40.20 1242 1392 1.0E-37 T 28-03-2018 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 720 737 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 SUPERFAMILY SSF51971 190 430 2.53E-62 T 28-03-2018 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 SUPERFAMILY SSF53706 711 1247 7.2E-203 T 28-03-2018 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 Gene3D G3DSA:2.20.25.90 726 771 6.3E-18 T 28-03-2018 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 PRINTS PR00419 Adrenodoxin reductase family signature 192 214 1.6E-16 T 28-03-2018 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 PRINTS PR00419 Adrenodoxin reductase family signature 323 337 1.6E-16 T 28-03-2018 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 PRINTS PR00419 Adrenodoxin reductase family signature 257 267 1.6E-16 T 28-03-2018 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 PRINTS PR00419 Adrenodoxin reductase family signature 215 228 1.6E-16 T 28-03-2018 AL549_RS01105 9390d91c3685db8d41ebd841eaa6e67f 1399 Gene3D G3DSA:3.50.50.60 283 335 5.6E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS03635 c0b87639b39258788b6a6e407b92f4eb 1022 Gene3D G3DSA:1.10.1200.10 438 530 3.7E-15 T 28-03-2018 AL549_RS03635 c0b87639b39258788b6a6e407b92f4eb 1022 SUPERFAMILY SSF47336 452 520 1.31E-11 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL549_RS03635 c0b87639b39258788b6a6e407b92f4eb 1022 Pfam PF00668 Condensation domain 557 999 5.1E-43 T 28-03-2018 IPR001242 Condensation domain AL549_RS03635 c0b87639b39258788b6a6e407b92f4eb 1022 Gene3D G3DSA:3.30.559.10 5 202 6.7E-12 T 28-03-2018 AL549_RS03635 c0b87639b39258788b6a6e407b92f4eb 1022 Pfam PF00550 Phosphopantetheine attachment site 469 520 8.5E-9 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL549_RS03635 c0b87639b39258788b6a6e407b92f4eb 1022 SUPERFAMILY SSF52777 29 177 3.56E-14 T 28-03-2018 AL549_RS03635 c0b87639b39258788b6a6e407b92f4eb 1022 SUPERFAMILY SSF52777 744 1002 5.23E-30 T 28-03-2018 AL549_RS03635 c0b87639b39258788b6a6e407b92f4eb 1022 SUPERFAMILY SSF52777 556 756 1.56E-33 T 28-03-2018 AL549_RS03635 c0b87639b39258788b6a6e407b92f4eb 1022 ProSitePatterns PS00012 Phosphopantetheine attachment site. 481 496 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AL549_RS03635 c0b87639b39258788b6a6e407b92f4eb 1022 Gene3D G3DSA:3.30.559.10 531 750 1.4E-26 T 28-03-2018 AL549_RS03635 c0b87639b39258788b6a6e407b92f4eb 1022 SMART SM00823 Phosphopantetheine attachment site 454 526 0.0038 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL549_RS11055 a12e812d1ab4c6ff1baa04c0d3ee7fc0 171 Pfam PF11086 Protein of unknown function (DUF2878) 4 149 1.4E-31 T 28-03-2018 IPR021306 Protein of unknown function DUF2878 AL549_RS06900 fad679a556b0bbbd4a22e8a447a79e32 438 Pfam PF00890 FAD binding domain 5 411 2.4E-70 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS06900 fad679a556b0bbbd4a22e8a447a79e32 438 SUPERFAMILY SSF51905 143 191 4.76E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS06900 fad679a556b0bbbd4a22e8a447a79e32 438 SUPERFAMILY SSF51905 94 103 4.76E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS06900 fad679a556b0bbbd4a22e8a447a79e32 438 SUPERFAMILY SSF51905 1 36 4.76E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS06900 fad679a556b0bbbd4a22e8a447a79e32 438 SUPERFAMILY SSF51905 258 428 4.76E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS06900 fad679a556b0bbbd4a22e8a447a79e32 438 PIRSF PIRSF000141 2 430 1.4E-181 T 28-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AL549_RS06900 fad679a556b0bbbd4a22e8a447a79e32 438 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 2 427 50.45 T 28-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AL549_RS06900 fad679a556b0bbbd4a22e8a447a79e32 438 Gene3D G3DSA:3.50.50.60 2 435 1.4E-19 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS06900 fad679a556b0bbbd4a22e8a447a79e32 438 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 4 423 1.4E-190 T 28-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AL549_RS08555 dd7490d4ccce5bfe38c5379f03947a01 529 Gene3D G3DSA:3.40.190.10 170 287 0.01 T 28-03-2018 AL549_RS08555 dd7490d4ccce5bfe38c5379f03947a01 529 Gene3D G3DSA:1.10.530.10 291 469 5.7E-35 T 28-03-2018 AL549_RS08555 dd7490d4ccce5bfe38c5379f03947a01 529 Pfam PF01464 Transglycosylase SLT domain 318 419 4.1E-21 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AL549_RS08555 dd7490d4ccce5bfe38c5379f03947a01 529 SUPERFAMILY SSF53955 265 416 6.91E-36 T 28-03-2018 IPR023346 Lysozyme-like domain AL549_RS08555 dd7490d4ccce5bfe38c5379f03947a01 529 SUPERFAMILY SSF53955 451 468 6.91E-36 T 28-03-2018 IPR023346 Lysozyme-like domain AL549_RS08555 dd7490d4ccce5bfe38c5379f03947a01 529 SUPERFAMILY SSF53850 44 286 6.0E-33 T 28-03-2018 AL549_RS08555 dd7490d4ccce5bfe38c5379f03947a01 529 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 328 356 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AL549_RS08555 dd7490d4ccce5bfe38c5379f03947a01 529 Gene3D G3DSA:3.40.190.10 7 169 2.4E-15 T 28-03-2018 AL549_RS08555 dd7490d4ccce5bfe38c5379f03947a01 529 SMART SM00062 43 287 3.9E-21 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS08555 dd7490d4ccce5bfe38c5379f03947a01 529 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 286 5.9E-28 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS08555 dd7490d4ccce5bfe38c5379f03947a01 529 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 9 494 47.982 T 28-03-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 AL549_RS11800 468d8a4d759fbd8d9197dcd5d485b19a 378 Gene3D G3DSA:2.60.120.10 161 352 4.4E-43 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS11800 468d8a4d759fbd8d9197dcd5d485b19a 378 Pfam PF04209 homogentisate 1,2-dioxygenase 88 375 1.1E-20 T 28-03-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 AL549_RS11800 468d8a4d759fbd8d9197dcd5d485b19a 378 Gene3D G3DSA:2.60.120.10 22 160 1.6E-8 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS11800 468d8a4d759fbd8d9197dcd5d485b19a 378 SUPERFAMILY SSF51182 45 375 7.44E-89 T 28-03-2018 IPR011051 RmlC-like cupin domain AL549_RS07035 90a08825384605878d82791df754d858 234 Gene3D G3DSA:3.40.1410.10 65 231 9.0E-32 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL549_RS07035 90a08825384605878d82791df754d858 234 SUPERFAMILY SSF64288 53 228 3.93E-41 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL549_RS07035 90a08825384605878d82791df754d858 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 3.0E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS07035 90a08825384605878d82791df754d858 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 3.0E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS07035 90a08825384605878d82791df754d858 234 SMART SM00345 6 65 1.9E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS07035 90a08825384605878d82791df754d858 234 SUPERFAMILY SSF46785 3 75 2.09E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS07035 90a08825384605878d82791df754d858 234 Pfam PF07702 UTRA domain 86 223 4.7E-36 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL549_RS07035 90a08825384605878d82791df754d858 234 SMART SM00866 86 225 6.2E-32 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL549_RS07035 90a08825384605878d82791df754d858 234 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 2 229 8.5E-113 T 28-03-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR AL549_RS07035 90a08825384605878d82791df754d858 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 4.3E-18 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS07035 90a08825384605878d82791df754d858 234 Gene3D G3DSA:1.10.10.10 2 64 7.4E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS05730 8aefa0c56309fe0a2ba8ce7c5c2f12c2 295 SUPERFAMILY SSF46785 6 86 1.34E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS05730 8aefa0c56309fe0a2ba8ce7c5c2f12c2 295 Gene3D G3DSA:1.10.10.10 1 87 9.2E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS05730 8aefa0c56309fe0a2ba8ce7c5c2f12c2 295 Gene3D G3DSA:3.40.190.10 96 179 9.8E-4 T 28-03-2018 AL549_RS05730 8aefa0c56309fe0a2ba8ce7c5c2f12c2 295 Gene3D G3DSA:3.40.190.10 180 264 9.1E-6 T 28-03-2018 AL549_RS05730 8aefa0c56309fe0a2ba8ce7c5c2f12c2 295 SUPERFAMILY SSF53850 96 291 1.19E-16 T 28-03-2018 AL549_RS05730 8aefa0c56309fe0a2ba8ce7c5c2f12c2 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.5E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS05730 8aefa0c56309fe0a2ba8ce7c5c2f12c2 295 Pfam PF03466 LysR substrate binding domain 122 291 3.3E-13 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS09940 a724c2f9c0035622052d97e4131be054 196 SUPERFAMILY SSF46689 2 77 2.33E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS09940 a724c2f9c0035622052d97e4131be054 196 Gene3D G3DSA:1.10.10.60 2 64 1.2E-8 T 28-03-2018 AL549_RS09940 a724c2f9c0035622052d97e4131be054 196 Gene3D G3DSA:1.10.357.10 65 195 6.7E-20 T 28-03-2018 AL549_RS09940 a724c2f9c0035622052d97e4131be054 196 SUPERFAMILY SSF48498 87 193 1.78E-20 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL549_RS09940 a724c2f9c0035622052d97e4131be054 196 Pfam PF13305 WHG domain 92 172 9.7E-13 T 28-03-2018 IPR025996 WHG domain AL549_RS21910 9daf635327cfff35844e64fbe4e2fe0e 293 SUPERFAMILY SSF69593 16 289 2.88E-27 T 28-03-2018 AL549_RS21910 9daf635327cfff35844e64fbe4e2fe0e 293 SMART SM00563 85 227 7.5E-21 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS21910 9daf635327cfff35844e64fbe4e2fe0e 293 Gene3D G3DSA:3.40.1130.10 36 256 1.3E-24 T 28-03-2018 AL549_RS21910 9daf635327cfff35844e64fbe4e2fe0e 293 Pfam PF01553 Acyltransferase 73 226 1.7E-14 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS05825 1c6e0584b5b47ab917a8a99d4333f574 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 5.1E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS05825 1c6e0584b5b47ab917a8a99d4333f574 304 Gene3D G3DSA:1.10.10.10 2 87 8.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS05825 1c6e0584b5b47ab917a8a99d4333f574 304 SUPERFAMILY SSF53850 90 302 1.76E-17 T 28-03-2018 AL549_RS05825 1c6e0584b5b47ab917a8a99d4333f574 304 SUPERFAMILY SSF46785 4 86 1.75E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS05825 1c6e0584b5b47ab917a8a99d4333f574 304 Gene3D G3DSA:3.40.190.10 88 212 5.6E-10 T 28-03-2018 AL549_RS05825 1c6e0584b5b47ab917a8a99d4333f574 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 3.9E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS05825 1c6e0584b5b47ab917a8a99d4333f574 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 3.9E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS05825 1c6e0584b5b47ab917a8a99d4333f574 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 3.9E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS05825 1c6e0584b5b47ab917a8a99d4333f574 304 Pfam PF03466 LysR substrate binding domain 87 302 2.5E-14 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS03875 43775501a5a8a5e84406f816d9416c8e 466 SUPERFAMILY SSF47384 207 284 2.75E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS03875 43775501a5a8a5e84406f816d9416c8e 466 SMART SM00388 222 286 1.5E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS03875 43775501a5a8a5e84406f816d9416c8e 466 SMART SM00387 331 441 1.5E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS03875 43775501a5a8a5e84406f816d9416c8e 466 SUPERFAMILY SSF55874 330 441 4.32E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS03875 43775501a5a8a5e84406f816d9416c8e 466 Gene3D G3DSA:1.10.287.130 212 274 7.0E-12 T 28-03-2018 AL549_RS03875 43775501a5a8a5e84406f816d9416c8e 466 Gene3D G3DSA:3.30.565.10 275 443 1.6E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS03875 43775501a5a8a5e84406f816d9416c8e 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 285 2.1E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS03875 43775501a5a8a5e84406f816d9416c8e 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 8.9E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS03875 43775501a5a8a5e84406f816d9416c8e 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 438 8.9E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS03875 43775501a5a8a5e84406f816d9416c8e 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 8.9E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS03875 43775501a5a8a5e84406f816d9416c8e 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 439 1.0E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS10875 33329dadf550a7f853db342427083d8c 288 SMART SM00382 35 244 2.6E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS10875 33329dadf550a7f853db342427083d8c 288 Gene3D G3DSA:3.40.50.300 3 282 2.8E-75 T 28-03-2018 AL549_RS10875 33329dadf550a7f853db342427083d8c 288 SUPERFAMILY SSF52540 6 257 1.1E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS10875 33329dadf550a7f853db342427083d8c 288 Pfam PF00005 ABC transporter 26 186 1.1E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS10875 33329dadf550a7f853db342427083d8c 288 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS07805 726a9ab821f24cc846a49561158a8964 510 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 24 509 43.196 T 28-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL549_RS07805 726a9ab821f24cc846a49561158a8964 510 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 506 7.4E-81 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS07805 726a9ab821f24cc846a49561158a8964 510 SUPERFAMILY SSF55681 161 507 1.71E-118 T 28-03-2018 AL549_RS07805 726a9ab821f24cc846a49561158a8964 510 Gene3D G3DSA:2.40.50.140 18 153 1.1E-27 T 28-03-2018 AL549_RS07805 726a9ab821f24cc846a49561158a8964 510 Gene3D G3DSA:3.30.930.10 155 506 3.6E-99 T 28-03-2018 AL549_RS07805 726a9ab821f24cc846a49561158a8964 510 SUPERFAMILY SSF50249 16 154 1.27E-33 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS07805 726a9ab821f24cc846a49561158a8964 510 Pfam PF01336 OB-fold nucleic acid binding domain 73 145 7.1E-8 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL549_RS07805 726a9ab821f24cc846a49561158a8964 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 7.7E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL549_RS07805 726a9ab821f24cc846a49561158a8964 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 7.7E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL549_RS07805 726a9ab821f24cc846a49561158a8964 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 7.7E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL549_RS07805 726a9ab821f24cc846a49561158a8964 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 7.7E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL549_RS07805 726a9ab821f24cc846a49561158a8964 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 7.7E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL549_RS07805 726a9ab821f24cc846a49561158a8964 510 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 509 3.7E-199 T 28-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL549_RS16615 10ec962d298ba8899520d9082b0528c7 405 SUPERFAMILY SSF51161 293 403 3.68E-14 T 28-03-2018 IPR011004 Trimeric LpxA-like AL549_RS16615 10ec962d298ba8899520d9082b0528c7 405 Gene3D G3DSA:3.90.550.10 4 306 2.7E-62 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS16615 10ec962d298ba8899520d9082b0528c7 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.508 T 28-03-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL549_RS16615 10ec962d298ba8899520d9082b0528c7 405 Gene3D G3DSA:2.160.10.10 307 405 3.3E-8 T 28-03-2018 AL549_RS16615 10ec962d298ba8899520d9082b0528c7 405 SUPERFAMILY SSF53448 4 275 4.22E-70 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS16615 10ec962d298ba8899520d9082b0528c7 405 SUPERFAMILY SSF53448 341 358 4.22E-70 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS16615 10ec962d298ba8899520d9082b0528c7 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL549_RS16615 10ec962d298ba8899520d9082b0528c7 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL549_RS16615 10ec962d298ba8899520d9082b0528c7 405 Pfam PF00483 Nucleotidyl transferase 6 273 1.1E-63 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL549_RS16615 10ec962d298ba8899520d9082b0528c7 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL549_RS16615 10ec962d298ba8899520d9082b0528c7 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 1.3E-153 T 28-03-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL549_RS09860 f394b9404a525ba89dd3b41c54d65e96 90 Gene3D G3DSA:4.10.520.10 1 90 6.9E-34 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL549_RS09860 f394b9404a525ba89dd3b41c54d65e96 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.9E-21 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS09860 f394b9404a525ba89dd3b41c54d65e96 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.9E-21 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS09860 f394b9404a525ba89dd3b41c54d65e96 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.9E-21 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS09860 f394b9404a525ba89dd3b41c54d65e96 90 SUPERFAMILY SSF47729 1 90 1.32E-31 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL549_RS09860 f394b9404a525ba89dd3b41c54d65e96 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.3E-33 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS09860 f394b9404a525ba89dd3b41c54d65e96 90 SMART SM00411 1 90 4.3E-43 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS09860 f394b9404a525ba89dd3b41c54d65e96 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AL549_RS02625 f4b16e0def807c89e0bb4f9324207fd6 256 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 3.4E-16 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS02625 f4b16e0def807c89e0bb4f9324207fd6 256 SMART SM01134 73 234 1.0E-66 T 28-03-2018 AL549_RS02625 f4b16e0def807c89e0bb4f9324207fd6 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL549_RS02625 f4b16e0def807c89e0bb4f9324207fd6 256 SUPERFAMILY SSF100950 74 234 2.16E-30 T 28-03-2018 AL549_RS02625 f4b16e0def807c89e0bb4f9324207fd6 256 SUPERFAMILY SSF46785 4 61 7.86E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02625 f4b16e0def807c89e0bb4f9324207fd6 256 Pfam PF00455 DeoR C terminal sensor domain 75 233 1.2E-50 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AL549_RS02625 f4b16e0def807c89e0bb4f9324207fd6 256 SMART SM00420 6 58 3.9E-14 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS02625 f4b16e0def807c89e0bb4f9324207fd6 256 Gene3D G3DSA:3.40.50.1360 83 239 8.6E-41 T 28-03-2018 AL549_RS02625 f4b16e0def807c89e0bb4f9324207fd6 256 Gene3D G3DSA:1.10.10.10 1 82 2.2E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS16275 4d3ea8905bbfb4592291285740e2a7e9 807 SMART SM00052 548 794 4.4E-98 T 28-03-2018 IPR001633 EAL domain AL549_RS16275 4d3ea8905bbfb4592291285740e2a7e9 807 Pfam PF08269 Cache domain 13 305 1.9E-88 T 28-03-2018 IPR004010 Double Cache domain 2 AL549_RS16275 4d3ea8905bbfb4592291285740e2a7e9 807 SUPERFAMILY SSF141868 553 800 1.05E-81 T 28-03-2018 IPR001633 EAL domain AL549_RS16275 4d3ea8905bbfb4592291285740e2a7e9 807 Pfam PF00563 EAL domain 554 789 1.6E-65 T 28-03-2018 IPR001633 EAL domain AL549_RS16275 4d3ea8905bbfb4592291285740e2a7e9 807 Pfam PF00990 Diguanylate cyclase, GGDEF domain 377 533 3.2E-42 T 28-03-2018 IPR000160 GGDEF domain AL549_RS16275 4d3ea8905bbfb4592291285740e2a7e9 807 Gene3D G3DSA:3.30.70.270 370 541 2.5E-55 T 28-03-2018 AL549_RS16275 4d3ea8905bbfb4592291285740e2a7e9 807 SMART SM00267 366 538 3.6E-62 T 28-03-2018 IPR000160 GGDEF domain AL549_RS16275 4d3ea8905bbfb4592291285740e2a7e9 807 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 374 536 4.4E-39 T 28-03-2018 IPR000160 GGDEF domain AL549_RS16275 4d3ea8905bbfb4592291285740e2a7e9 807 SUPERFAMILY SSF55073 382 540 4.39E-44 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS16275 4d3ea8905bbfb4592291285740e2a7e9 807 SMART SM01049 50 143 1.8E-23 T 28-03-2018 IPR033480 Single Cache domain 2 AL549_RS16275 4d3ea8905bbfb4592291285740e2a7e9 807 Gene3D G3DSA:3.30.450.20 203 326 6.2E-22 T 28-03-2018 AL549_RS16275 4d3ea8905bbfb4592291285740e2a7e9 807 Gene3D G3DSA:3.30.450.20 9 202 2.9E-39 T 28-03-2018 AL549_RS16275 4d3ea8905bbfb4592291285740e2a7e9 807 Gene3D G3DSA:3.20.20.450 542 807 3.1E-87 T 28-03-2018 IPR001633 EAL domain AL549_RS22190 c3b6b9b7d6083f7da992f230e54e27f0 497 SUPERFAMILY SSF53067 9 129 8.42E-37 T 28-03-2018 AL549_RS22190 c3b6b9b7d6083f7da992f230e54e27f0 497 PIRSF PIRSF001267 1 497 2.1E-178 T 28-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AL549_RS22190 c3b6b9b7d6083f7da992f230e54e27f0 497 SUPERFAMILY SSF53067 134 305 9.99E-43 T 28-03-2018 AL549_RS22190 c3b6b9b7d6083f7da992f230e54e27f0 497 Pfam PF02541 Ppx/GppA phosphatase family 23 303 3.7E-88 T 28-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AL549_RS22190 c3b6b9b7d6083f7da992f230e54e27f0 497 SUPERFAMILY SSF109604 309 495 1.32E-41 T 28-03-2018 AL549_RS22190 c3b6b9b7d6083f7da992f230e54e27f0 497 Gene3D G3DSA:3.30.420.150 123 301 4.7E-33 T 28-03-2018 AL549_RS22190 c3b6b9b7d6083f7da992f230e54e27f0 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 495 59.241 T 28-03-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 AL549_RS22190 c3b6b9b7d6083f7da992f230e54e27f0 497 Gene3D G3DSA:3.30.420.40 1 122 5.5E-39 T 28-03-2018 AL549_RS22005 575f30b23c352056f22956ccdc79605e 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 55.895 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL549_RS22005 575f30b23c352056f22956ccdc79605e 305 Gene3D G3DSA:3.40.1500.10 2 305 8.5E-140 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL549_RS22005 575f30b23c352056f22956ccdc79605e 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 28-03-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL549_RS22005 575f30b23c352056f22956ccdc79605e 305 SUPERFAMILY SSF102886 5 305 6.54E-138 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL549_RS22005 575f30b23c352056f22956ccdc79605e 305 PIRSF PIRSF000166 2 305 6.8E-129 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL549_RS22005 575f30b23c352056f22956ccdc79605e 305 PRINTS PR00073 Coprogen oxidase signature 166 195 3.7E-69 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL549_RS22005 575f30b23c352056f22956ccdc79605e 305 PRINTS PR00073 Coprogen oxidase signature 238 265 3.7E-69 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL549_RS22005 575f30b23c352056f22956ccdc79605e 305 PRINTS PR00073 Coprogen oxidase signature 94 118 3.7E-69 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL549_RS22005 575f30b23c352056f22956ccdc79605e 305 PRINTS PR00073 Coprogen oxidase signature 31 47 3.7E-69 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL549_RS22005 575f30b23c352056f22956ccdc79605e 305 PRINTS PR00073 Coprogen oxidase signature 266 292 3.7E-69 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL549_RS22005 575f30b23c352056f22956ccdc79605e 305 PRINTS PR00073 Coprogen oxidase signature 129 151 3.7E-69 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL549_RS22005 575f30b23c352056f22956ccdc79605e 305 Pfam PF01218 Coproporphyrinogen III oxidase 9 305 3.7E-132 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL549_RS23455 18544608a2a0f799f6d246984c6319b6 187 PIRSF PIRSF028513 2 185 1.8E-32 T 28-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AL549_RS23455 18544608a2a0f799f6d246984c6319b6 187 Gene3D G3DSA:2.60.450.10 86 185 5.3E-9 T 28-03-2018 AL549_RS23455 18544608a2a0f799f6d246984c6319b6 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 24.422 T 28-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AL549_RS23455 18544608a2a0f799f6d246984c6319b6 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 8 183 7.4E-49 T 28-03-2018 IPR010664 Lipopolysaccharide assembly, LptC-related AL549_RS23455 18544608a2a0f799f6d246984c6319b6 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 2.3E-52 T 28-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AL549_RS18605 022cacb613a5714651888337ac6c172d 276 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 2.6E-104 T 28-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AL549_RS18605 022cacb613a5714651888337ac6c172d 276 SUPERFAMILY SSF51717 4 274 2.09E-106 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL549_RS18605 022cacb613a5714651888337ac6c172d 276 Gene3D G3DSA:3.20.20.20 2 276 2.9E-111 T 28-03-2018 AL549_RS18605 022cacb613a5714651888337ac6c172d 276 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL549_RS18605 022cacb613a5714651888337ac6c172d 276 Pfam PF00809 Pterin binding enzyme 18 257 5.6E-92 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL549_RS18605 022cacb613a5714651888337ac6c172d 276 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL549_RS00080 4fb5d7f3f880301647824e221917cae7 296 Gene3D G3DSA:1.10.3720.10 1 283 1.8E-44 T 28-03-2018 AL549_RS00080 4fb5d7f3f880301647824e221917cae7 296 SUPERFAMILY SSF161098 10 296 2.09E-68 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS00080 4fb5d7f3f880301647824e221917cae7 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 2.5E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS02985 b60566649abe3facd8e7991cc5fdc3a0 259 SUPERFAMILY SSF51182 29 123 5.87E-7 T 28-03-2018 IPR011051 RmlC-like cupin domain AL549_RS02985 b60566649abe3facd8e7991cc5fdc3a0 259 Pfam PF02311 AraC-like ligand binding domain 19 95 2.7E-5 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL549_RS02985 b60566649abe3facd8e7991cc5fdc3a0 259 Gene3D G3DSA:1.10.10.60 211 258 2.7E-10 T 28-03-2018 AL549_RS02985 b60566649abe3facd8e7991cc5fdc3a0 259 Pfam PF12833 Helix-turn-helix domain 177 252 4.1E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS02985 b60566649abe3facd8e7991cc5fdc3a0 259 SUPERFAMILY SSF46689 154 206 8.96E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS02985 b60566649abe3facd8e7991cc5fdc3a0 259 SMART SM00342 171 253 1.4E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS02985 b60566649abe3facd8e7991cc5fdc3a0 259 Gene3D G3DSA:1.10.10.60 161 210 1.1E-10 T 28-03-2018 AL549_RS02985 b60566649abe3facd8e7991cc5fdc3a0 259 Gene3D G3DSA:2.60.120.10 9 160 1.1E-6 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS02985 b60566649abe3facd8e7991cc5fdc3a0 259 SUPERFAMILY SSF46689 207 252 3.49E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS02985 b60566649abe3facd8e7991cc5fdc3a0 259 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 249 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL549_RS06495 e063f24d13d8aad70634962b6320dfef 226 Gene3D G3DSA:1.10.10.10 155 221 1.1E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS06495 e063f24d13d8aad70634962b6320dfef 226 SUPERFAMILY SSF52172 2 133 4.84E-29 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS06495 e063f24d13d8aad70634962b6320dfef 226 PIRSF PIRSF006171 2 224 2.4E-65 T 28-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 AL549_RS06495 e063f24d13d8aad70634962b6320dfef 226 SMART SM00448 4 117 3.0E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS06495 e063f24d13d8aad70634962b6320dfef 226 Pfam PF00072 Response regulator receiver domain 6 116 1.7E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS06495 e063f24d13d8aad70634962b6320dfef 226 Gene3D G3DSA:3.40.50.2300 3 141 1.3E-23 T 28-03-2018 AL549_RS21965 304b7fa8d7bd46431140168b91148361 191 Hamap MF_00163 Peptide deformylase [def]. 23 183 31.113 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS21965 304b7fa8d7bd46431140168b91148361 191 PRINTS PR01576 Peptide deformylase signature 110 121 1.0E-37 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS21965 304b7fa8d7bd46431140168b91148361 191 PRINTS PR01576 Peptide deformylase signature 54 83 1.0E-37 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS21965 304b7fa8d7bd46431140168b91148361 191 PRINTS PR01576 Peptide deformylase signature 141 170 1.0E-37 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS21965 304b7fa8d7bd46431140168b91148361 191 PRINTS PR01576 Peptide deformylase signature 122 140 1.0E-37 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS21965 304b7fa8d7bd46431140168b91148361 191 SUPERFAMILY SSF56420 24 186 2.09E-62 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS21965 304b7fa8d7bd46431140168b91148361 191 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 25 180 1.6E-62 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS21965 304b7fa8d7bd46431140168b91148361 191 Gene3D G3DSA:3.90.45.10 10 191 1.0E-61 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS21965 304b7fa8d7bd46431140168b91148361 191 PIRSF PIRSF004749 6 191 5.3E-57 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS21965 304b7fa8d7bd46431140168b91148361 191 Pfam PF01327 Polypeptide deformylase 25 173 8.0E-51 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS02355 730b1e0454733a62a97db68ac1c16ee9 230 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 1.9E-43 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL549_RS02355 730b1e0454733a62a97db68ac1c16ee9 230 SUPERFAMILY SSF53639 2 220 4.71E-65 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL549_RS02355 730b1e0454733a62a97db68ac1c16ee9 230 Gene3D G3DSA:3.40.225.10 1 229 4.9E-55 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL549_RS02355 730b1e0454733a62a97db68ac1c16ee9 230 SMART SM01007 7 197 1.0E-65 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL549_RS11615 c77a84e822b350d4d6bb26ae2676d2e0 414 SUPERFAMILY SSF53383 5 410 2.69E-97 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS11615 c77a84e822b350d4d6bb26ae2676d2e0 414 Gene3D G3DSA:3.90.1150.10 270 414 1.7E-35 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS11615 c77a84e822b350d4d6bb26ae2676d2e0 414 Gene3D G3DSA:3.40.640.10 33 269 7.6E-49 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS11615 c77a84e822b350d4d6bb26ae2676d2e0 414 Pfam PF00266 Aminotransferase class-V 26 401 1.2E-70 T 28-03-2018 IPR000192 Aminotransferase class V domain AL549_RS11615 c77a84e822b350d4d6bb26ae2676d2e0 414 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 5 404 9.4E-165 T 28-03-2018 IPR011340 Cysteine desulfurase-related AL549_RS21885 916f62b9c8b1e3a24b08ec69af459945 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 28-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL549_RS21885 916f62b9c8b1e3a24b08ec69af459945 312 Gene3D G3DSA:3.30.470.10 1 142 1.7E-42 T 28-03-2018 AL549_RS21885 916f62b9c8b1e3a24b08ec69af459945 312 SUPERFAMILY SSF56752 7 307 3.66E-103 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL549_RS21885 916f62b9c8b1e3a24b08ec69af459945 312 Pfam PF01063 Amino-transferase class IV 36 268 5.1E-47 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL549_RS21885 916f62b9c8b1e3a24b08ec69af459945 312 Gene3D G3DSA:3.20.10.10 143 303 1.2E-50 T 28-03-2018 AL549_RS21885 916f62b9c8b1e3a24b08ec69af459945 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 2.1E-143 T 28-03-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 AL549_RS03190 47c3bb131fbd51227f2761c2fb67bea9 621 Gene3D G3DSA:2.60.120.10 8 145 1.9E-15 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS03190 47c3bb131fbd51227f2761c2fb67bea9 621 SUPERFAMILY SSF51206 11 143 1.15E-14 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AL549_RS03190 47c3bb131fbd51227f2761c2fb67bea9 621 Pfam PF00571 CBS domain 158 208 6.8E-4 T 28-03-2018 IPR000644 CBS domain AL549_RS03190 47c3bb131fbd51227f2761c2fb67bea9 621 Pfam PF00571 CBS domain 224 273 2.8E-7 T 28-03-2018 IPR000644 CBS domain AL549_RS03190 47c3bb131fbd51227f2761c2fb67bea9 621 SMART SM00116 230 277 2.3E-7 T 28-03-2018 IPR000644 CBS domain AL549_RS03190 47c3bb131fbd51227f2761c2fb67bea9 621 SMART SM00116 165 213 4.1 T 28-03-2018 IPR000644 CBS domain AL549_RS03190 47c3bb131fbd51227f2761c2fb67bea9 621 SUPERFAMILY SSF54631 154 274 1.77E-24 T 28-03-2018 AL549_RS03190 47c3bb131fbd51227f2761c2fb67bea9 621 Gene3D G3DSA:3.30.460.10 331 468 3.5E-4 T 28-03-2018 AL549_RS03190 47c3bb131fbd51227f2761c2fb67bea9 621 Gene3D G3DSA:3.10.580.10 146 223 2.0E-9 T 28-03-2018 AL549_RS03190 47c3bb131fbd51227f2761c2fb67bea9 621 Gene3D G3DSA:3.10.580.10 224 330 2.5E-11 T 28-03-2018 AL549_RS03190 47c3bb131fbd51227f2761c2fb67bea9 621 Pfam PF03445 Putative nucleotidyltransferase DUF294 303 436 1.4E-46 T 28-03-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AL549_RS03190 47c3bb131fbd51227f2761c2fb67bea9 621 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 475 618 1.7E-44 T 28-03-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AL549_RS14135 6c18dbae82c5ce39e8e149da4b376012 36 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 6.6E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS10285 f0820014eb83d867a99563fbc39b4ecb 919 Pfam PF10531 SLBB domain 296 345 4.3E-10 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS10285 f0820014eb83d867a99563fbc39b4ecb 919 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 1.6E-189 T 28-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AL549_RS10285 f0820014eb83d867a99563fbc39b4ecb 919 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 1.4E-36 T 28-03-2018 IPR026902 RnfC Barrel sandwich hybrid domain AL549_RS10285 f0820014eb83d867a99563fbc39b4ecb 919 Gene3D G3DSA:3.30.70.20 374 488 3.7E-15 T 28-03-2018 AL549_RS10285 f0820014eb83d867a99563fbc39b4ecb 919 Pfam PF12838 4Fe-4S dicluster domain 378 430 3.6E-7 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS10285 f0820014eb83d867a99563fbc39b4ecb 919 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 769 248.923 T 28-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AL549_RS10285 f0820014eb83d867a99563fbc39b4ecb 919 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS10285 f0820014eb83d867a99563fbc39b4ecb 919 SUPERFAMILY SSF142019 96 302 2.09E-59 T 28-03-2018 AL549_RS10285 f0820014eb83d867a99563fbc39b4ecb 919 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 3.6E-48 T 28-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS10285 f0820014eb83d867a99563fbc39b4ecb 919 SUPERFAMILY SSF46548 336 446 1.26E-19 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL549_RS23200 e59cf10e460999beb540b76881ed0a06 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.14 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23200 e59cf10e460999beb540b76881ed0a06 58 PIRSF PIRSF002211 1 58 8.9E-29 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23200 e59cf10e460999beb540b76881ed0a06 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 4.5E-27 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23200 e59cf10e460999beb540b76881ed0a06 58 SUPERFAMILY SSF55129 1 58 2.75E-23 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AL549_RS23200 e59cf10e460999beb540b76881ed0a06 58 Gene3D G3DSA:3.30.1390.20 4 58 4.3E-26 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AL549_RS23200 e59cf10e460999beb540b76881ed0a06 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 4.0E-21 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AL549_RS23200 e59cf10e460999beb540b76881ed0a06 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 28-03-2018 IPR018038 Ribosomal protein L30, conserved site AL549_RS23210 bdad69aaaab1403a5c9fcb34ac7b740f 444 PIRSF PIRSF004557 10 442 1.4E-121 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL549_RS23210 bdad69aaaab1403a5c9fcb34ac7b740f 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.188 T 28-03-2018 IPR026593 Protein translocase subunit SecY AL549_RS23210 bdad69aaaab1403a5c9fcb34ac7b740f 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 5.7E-134 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL549_RS23210 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.9E-95 T 28-03-2018 AL549_RS23210 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.9E-95 T 28-03-2018 AL549_RS23210 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.9E-95 T 28-03-2018 AL549_RS23210 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-95 T 28-03-2018 AL549_RS23210 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-95 T 28-03-2018 AL549_RS23210 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.9E-95 T 28-03-2018 AL549_RS23210 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-95 T 28-03-2018 AL549_RS23210 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.9E-95 T 28-03-2018 AL549_RS23210 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.9E-95 T 28-03-2018 AL549_RS23210 bdad69aaaab1403a5c9fcb34ac7b740f 444 SUPERFAMILY SSF103491 15 425 7.06E-131 T 28-03-2018 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL549_RS23210 bdad69aaaab1403a5c9fcb34ac7b740f 444 Pfam PF00344 SecY translocase 76 418 5.6E-118 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL549_RS23210 bdad69aaaab1403a5c9fcb34ac7b740f 444 Gene3D G3DSA:1.10.3370.10 10 440 1.3E-157 T 28-03-2018 AL549_RS23210 bdad69aaaab1403a5c9fcb34ac7b740f 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 28-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL549_RS23210 bdad69aaaab1403a5c9fcb34ac7b740f 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 28-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL549_RS09840 d8c889cdaf42e281530e625962012a0a 432 TIGRFAM TIGR00115 tig: trigger factor 11 412 1.6E-142 T 28-03-2018 IPR005215 Trigger factor GO:0015031 AL549_RS09840 d8c889cdaf42e281530e625962012a0a 432 SUPERFAMILY SSF109998 248 429 3.53E-49 T 28-03-2018 IPR027304 Trigger factor/SurA domain AL549_RS09840 d8c889cdaf42e281530e625962012a0a 432 SUPERFAMILY SSF54534 90 241 8.84E-37 T 28-03-2018 AL549_RS09840 d8c889cdaf42e281530e625962012a0a 432 Gene3D G3DSA:1.10.3120.10 211 389 5.8E-49 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AL549_RS09840 d8c889cdaf42e281530e625962012a0a 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 2.1E-40 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AL549_RS09840 d8c889cdaf42e281530e625962012a0a 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 5.4E-13 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL549_RS09840 d8c889cdaf42e281530e625962012a0a 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 5.2E-43 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AL549_RS09840 d8c889cdaf42e281530e625962012a0a 432 PIRSF PIRSF003095 1 432 1.1E-127 T 28-03-2018 IPR005215 Trigger factor GO:0015031 AL549_RS09840 d8c889cdaf42e281530e625962012a0a 432 Hamap MF_00303 Trigger factor [tig]. 1 418 21.786 T 28-03-2018 IPR005215 Trigger factor GO:0015031 AL549_RS09840 d8c889cdaf42e281530e625962012a0a 432 SUPERFAMILY SSF102735 1 131 4.05E-41 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AL549_RS09840 d8c889cdaf42e281530e625962012a0a 432 Gene3D G3DSA:3.30.70.1050 1 118 6.4E-36 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AL549_RS06765 d3f6658bf34b77ef200efc2e4a3160c1 299 Pfam PF00892 EamA-like transporter family 7 139 8.0E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS06765 d3f6658bf34b77ef200efc2e4a3160c1 299 Pfam PF00892 EamA-like transporter family 152 283 1.2E-7 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS06765 d3f6658bf34b77ef200efc2e4a3160c1 299 TIGRFAM TIGR00688 rarD: protein RarD 7 259 1.1E-48 T 28-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 AL549_RS06765 d3f6658bf34b77ef200efc2e4a3160c1 299 SUPERFAMILY SSF103481 207 283 6.54E-8 T 28-03-2018 AL549_RS06765 d3f6658bf34b77ef200efc2e4a3160c1 299 SUPERFAMILY SSF103481 62 140 1.57E-9 T 28-03-2018 AL549_RS22860 c617d9254fbe6486a6327732a1548d9c 76 SUPERFAMILY SSF47336 4 75 9.03E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL549_RS22860 c617d9254fbe6486a6327732a1548d9c 76 Gene3D G3DSA:1.10.1200.10 1 76 2.8E-11 T 28-03-2018 AL549_RS22860 c617d9254fbe6486a6327732a1548d9c 76 Pfam PF00550 Phosphopantetheine attachment site 5 72 1.5E-4 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL549_RS15095 150e6655fc9b95bc79babd338b67aac9 81 Pfam PF07362 Post-segregation antitoxin CcdA 11 81 9.1E-29 T 28-03-2018 IPR009956 Post-segregation antitoxin CcdA AL549_RS23460 9b8895c0f0d32d18af2fd0e39de92c62 185 PIRSF PIRSF006118 10 185 4.9E-75 T 28-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL549_RS23460 9b8895c0f0d32d18af2fd0e39de92c62 185 SUPERFAMILY SSF56784 21 178 1.84E-39 T 28-03-2018 IPR023214 HAD-like domain AL549_RS23460 9b8895c0f0d32d18af2fd0e39de92c62 185 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 23 174 5.8E-62 T 28-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL549_RS23460 9b8895c0f0d32d18af2fd0e39de92c62 185 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 157 1.6E-7 T 28-03-2018 IPR023214 HAD-like domain AL549_RS23460 9b8895c0f0d32d18af2fd0e39de92c62 185 Gene3D G3DSA:3.40.50.1000 11 185 3.7E-25 T 28-03-2018 IPR023214 HAD-like domain AL549_RS15690 0d1791c355fcdcee83ba65f0fba9638c 143 Pfam PF01478 Type IV leader peptidase family 10 109 3.3E-8 T 28-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AL549_RS08015 a8dd9534bbf9da09e5faedb4b7ab44ee 239 SUPERFAMILY SSF64438 2 239 2.38E-83 T 28-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AL549_RS08015 a8dd9534bbf9da09e5faedb4b7ab44ee 239 Gene3D G3DSA:3.60.140.10 1 239 2.6E-89 T 28-03-2018 AL549_RS08015 a8dd9534bbf9da09e5faedb4b7ab44ee 239 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 18 237 1.4E-72 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase AL549_RS08015 a8dd9534bbf9da09e5faedb4b7ab44ee 239 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 29 238 8.0E-59 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase AL549_RS12735 945fa7e1d020f17d0084b62d76ac054a 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AL549_RS12735 945fa7e1d020f17d0084b62d76ac054a 303 Pfam PF00480 ROK family 2 300 3.3E-73 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AL549_RS12735 945fa7e1d020f17d0084b62d76ac054a 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 65.686 T 28-03-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 AL549_RS12735 945fa7e1d020f17d0084b62d76ac054a 303 Gene3D G3DSA:3.30.420.40 114 302 2.1E-45 T 28-03-2018 AL549_RS12735 945fa7e1d020f17d0084b62d76ac054a 303 Gene3D G3DSA:3.30.420.40 1 113 2.5E-22 T 28-03-2018 AL549_RS12735 945fa7e1d020f17d0084b62d76ac054a 303 SUPERFAMILY SSF53067 1 299 6.49E-57 T 28-03-2018 AL549_RS22525 109974524ada82306538ade6db55ad34 163 Pfam PF04612 Type II secretion system (T2SS), protein M 7 162 1.1E-54 T 28-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 AL549_RS22525 109974524ada82306538ade6db55ad34 163 Gene3D G3DSA:3.30.1360.100 87 161 1.6E-25 T 28-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain AL549_RS22525 109974524ada82306538ade6db55ad34 163 SUPERFAMILY SSF103054 85 162 5.23E-24 T 28-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain AL549_RS22525 109974524ada82306538ade6db55ad34 163 PIRSF PIRSF006291 2 162 1.1E-39 T 28-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 AL549_RS10715 1c63044d74d46ac9635bcc83a4858e5c 248 SUPERFAMILY SSF51735 9 247 8.2E-88 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS10715 1c63044d74d46ac9635bcc83a4858e5c 248 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 12 246 4.7E-101 T 28-03-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL549_RS10715 1c63044d74d46ac9635bcc83a4858e5c 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 219 6.2E-6 T 28-03-2018 AL549_RS10715 1c63044d74d46ac9635bcc83a4858e5c 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL549_RS10715 1c63044d74d46ac9635bcc83a4858e5c 248 Gene3D G3DSA:3.40.50.720 52 248 7.5E-69 T 28-03-2018 AL549_RS10715 1c63044d74d46ac9635bcc83a4858e5c 248 Gene3D G3DSA:3.40.50.720 2 51 3.1E-11 T 28-03-2018 AL549_RS10715 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.2E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS10715 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.2E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS10715 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.2E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS10715 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.2E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS10715 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.2E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS10715 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.2E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS10715 1c63044d74d46ac9635bcc83a4858e5c 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 245 3.3E-68 T 28-03-2018 AL549_RS10715 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.4E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS10715 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.4E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS10715 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.4E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS01795 b840dea64c7cb468972f94ed5cff74e2 299 SUPERFAMILY SSF53850 90 277 3.44E-14 T 28-03-2018 AL549_RS01795 b840dea64c7cb468972f94ed5cff74e2 299 Gene3D G3DSA:3.40.190.10 87 167 0.0016 T 28-03-2018 AL549_RS01795 b840dea64c7cb468972f94ed5cff74e2 299 Gene3D G3DSA:3.40.190.10 168 246 2.0E-5 T 28-03-2018 AL549_RS01795 b840dea64c7cb468972f94ed5cff74e2 299 Pfam PF03466 LysR substrate binding domain 92 276 2.7E-8 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS01795 b840dea64c7cb468972f94ed5cff74e2 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 7.1E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01795 b840dea64c7cb468972f94ed5cff74e2 299 SUPERFAMILY SSF46785 1 82 5.99E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01795 b840dea64c7cb468972f94ed5cff74e2 299 Gene3D G3DSA:1.10.10.10 1 83 6.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01795 b840dea64c7cb468972f94ed5cff74e2 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01795 b840dea64c7cb468972f94ed5cff74e2 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01795 b840dea64c7cb468972f94ed5cff74e2 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS15400 3b565f26a9490fe47674ecfef972fc5c 1014 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS15400 3b565f26a9490fe47674ecfef972fc5c 1014 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 4.6E-60 T 28-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AL549_RS15400 3b565f26a9490fe47674ecfef972fc5c 1014 Gene3D G3DSA:1.10.1060.10 536 702 1.6E-12 T 28-03-2018 AL549_RS15400 3b565f26a9490fe47674ecfef972fc5c 1014 Gene3D G3DSA:3.30.465.10 107 299 1.4E-44 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL549_RS15400 3b565f26a9490fe47674ecfef972fc5c 1014 SUPERFAMILY SSF55103 253 537 1.49E-51 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AL549_RS15400 3b565f26a9490fe47674ecfef972fc5c 1014 Gene3D G3DSA:3.30.43.10 36 106 8.6E-16 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AL549_RS15400 3b565f26a9490fe47674ecfef972fc5c 1014 Pfam PF01565 FAD binding domain 52 191 2.2E-35 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL549_RS15400 3b565f26a9490fe47674ecfef972fc5c 1014 Gene3D G3DSA:1.10.45.10 468 534 2.0E-11 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AL549_RS15400 3b565f26a9490fe47674ecfef972fc5c 1014 SUPERFAMILY SSF46548 649 685 1.13E-6 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL549_RS15400 3b565f26a9490fe47674ecfef972fc5c 1014 SUPERFAMILY SSF46548 563 617 1.13E-6 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL549_RS15400 3b565f26a9490fe47674ecfef972fc5c 1014 SUPERFAMILY SSF56176 18 192 2.24E-50 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL549_RS15400 3b565f26a9490fe47674ecfef972fc5c 1014 SUPERFAMILY SSF56176 235 277 2.24E-50 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL549_RS15400 3b565f26a9490fe47674ecfef972fc5c 1014 Pfam PF13183 4Fe-4S dicluster domain 570 681 2.4E-12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS10130 af44f091afbed509029aa8e56d5ef516 304 SMART SM00267 134 296 3.2E-49 T 28-03-2018 IPR000160 GGDEF domain AL549_RS10130 af44f091afbed509029aa8e56d5ef516 304 SUPERFAMILY SSF55073 150 294 2.59E-40 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS10130 af44f091afbed509029aa8e56d5ef516 304 Gene3D G3DSA:3.40.50.2300 5 147 5.7E-37 T 28-03-2018 AL549_RS10130 af44f091afbed509029aa8e56d5ef516 304 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 141 295 1.5E-38 T 28-03-2018 IPR000160 GGDEF domain AL549_RS10130 af44f091afbed509029aa8e56d5ef516 304 Pfam PF00072 Response regulator receiver domain 10 121 3.4E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS10130 af44f091afbed509029aa8e56d5ef516 304 SMART SM00448 8 121 5.5E-40 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS10130 af44f091afbed509029aa8e56d5ef516 304 SUPERFAMILY SSF52172 5 144 6.69E-42 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS10130 af44f091afbed509029aa8e56d5ef516 304 Pfam PF00990 Diguanylate cyclase, GGDEF domain 145 292 1.4E-36 T 28-03-2018 IPR000160 GGDEF domain AL549_RS10130 af44f091afbed509029aa8e56d5ef516 304 Gene3D G3DSA:3.30.70.270 148 297 3.6E-49 T 28-03-2018 AL549_RS16110 0d946d1b76d8072955394b4485b07ad1 625 SMART SM00116 159 212 0.22 T 28-03-2018 IPR000644 CBS domain AL549_RS16110 0d946d1b76d8072955394b4485b07ad1 625 SMART SM00116 229 276 1.4E-7 T 28-03-2018 IPR000644 CBS domain AL549_RS16110 0d946d1b76d8072955394b4485b07ad1 625 SMART SM00100 17 134 1.6E-8 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL549_RS16110 0d946d1b76d8072955394b4485b07ad1 625 Pfam PF00027 Cyclic nucleotide-binding domain 37 119 7.3E-14 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL549_RS16110 0d946d1b76d8072955394b4485b07ad1 625 Pfam PF00571 CBS domain 153 210 8.2E-8 T 28-03-2018 IPR000644 CBS domain AL549_RS16110 0d946d1b76d8072955394b4485b07ad1 625 Pfam PF00571 CBS domain 222 274 1.2E-9 T 28-03-2018 IPR000644 CBS domain AL549_RS16110 0d946d1b76d8072955394b4485b07ad1 625 SUPERFAMILY SSF51206 5 135 2.09E-25 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AL549_RS16110 0d946d1b76d8072955394b4485b07ad1 625 Pfam PF03445 Putative nucleotidyltransferase DUF294 301 438 1.1E-45 T 28-03-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AL549_RS16110 0d946d1b76d8072955394b4485b07ad1 625 Gene3D G3DSA:3.10.580.10 145 323 3.8E-27 T 28-03-2018 AL549_RS16110 0d946d1b76d8072955394b4485b07ad1 625 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 474 618 7.9E-47 T 28-03-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AL549_RS16110 0d946d1b76d8072955394b4485b07ad1 625 Gene3D G3DSA:2.60.120.10 1 144 9.0E-23 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS16110 0d946d1b76d8072955394b4485b07ad1 625 SUPERFAMILY SSF54631 146 275 7.71E-27 T 28-03-2018 AL549_RS12420 400566676338f6ff2f63cf50c5762873 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 38.392 T 28-03-2018 IPR009809 Cell division protein ZapC AL549_RS12420 400566676338f6ff2f63cf50c5762873 180 PIRSF PIRSF010252 1 178 9.9E-69 T 28-03-2018 IPR009809 Cell division protein ZapC AL549_RS12420 400566676338f6ff2f63cf50c5762873 180 Pfam PF07126 Cell-division protein ZapC 1 168 9.4E-63 T 28-03-2018 IPR009809 Cell division protein ZapC AL549_RS13900 4b564ef2a6097acfdd4be04fa3b65d24 143 Gene3D G3DSA:3.90.79.10 2 136 1.0E-13 T 28-03-2018 AL549_RS13900 4b564ef2a6097acfdd4be04fa3b65d24 143 SUPERFAMILY SSF55811 10 136 1.21E-14 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL549_RS13900 4b564ef2a6097acfdd4be04fa3b65d24 143 Pfam PF00293 NUDIX domain 15 98 2.3E-8 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL549_RS14820 4b564ef2a6097acfdd4be04fa3b65d24 143 Gene3D G3DSA:3.90.79.10 2 136 1.0E-13 T 28-03-2018 AL549_RS14820 4b564ef2a6097acfdd4be04fa3b65d24 143 SUPERFAMILY SSF55811 10 136 1.21E-14 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL549_RS14820 4b564ef2a6097acfdd4be04fa3b65d24 143 Pfam PF00293 NUDIX domain 15 98 2.3E-8 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL549_RS19105 2d7f84d93094f4888391bee6bf842399 208 Gene3D G3DSA:3.40.50.150 3 206 3.3E-33 T 28-03-2018 AL549_RS19105 2d7f84d93094f4888391bee6bf842399 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 203 2.1E-67 T 28-03-2018 AL549_RS19105 2d7f84d93094f4888391bee6bf842399 208 SUPERFAMILY SSF53335 13 204 4.56E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS19105 2d7f84d93094f4888391bee6bf842399 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 3 206 2.1E-76 T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AL549_RS19105 2d7f84d93094f4888391bee6bf842399 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 37.793 T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AL549_RS19105 2d7f84d93094f4888391bee6bf842399 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AL549_RS16325 7572a47ef2429383475e415d6774f3b3 228 Gene3D G3DSA:3.40.50.1000 68 219 3.9E-29 T 28-03-2018 IPR023214 HAD-like domain AL549_RS16325 7572a47ef2429383475e415d6774f3b3 228 SUPERFAMILY SSF56784 21 226 6.1E-46 T 28-03-2018 IPR023214 HAD-like domain AL549_RS16325 7572a47ef2429383475e415d6774f3b3 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 88 202 8.6E-19 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS16325 7572a47ef2429383475e415d6774f3b3 228 Gene3D G3DSA:3.40.50.1000 16 49 0.01 T 28-03-2018 IPR023214 HAD-like domain AL549_RS16325 7572a47ef2429383475e415d6774f3b3 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 25 203 2.2E-32 T 28-03-2018 IPR023214 HAD-like domain AL549_RS06505 62d6b1d93197a00bcd311e2fc5607505 467 PIRSF PIRSF002457 2 467 9.2E-138 T 28-03-2018 IPR030676 Citrate carrier CitT-related AL549_RS06505 62d6b1d93197a00bcd311e2fc5607505 467 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 22 461 8.6E-116 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL549_RS06505 62d6b1d93197a00bcd311e2fc5607505 467 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 467 5.2E-139 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL549_RS06490 eb2bc30914ba7ede59abe5c4b0e790f8 203 Gene3D G3DSA:2.160.10.10 1 192 1.7E-51 T 28-03-2018 AL549_RS06490 eb2bc30914ba7ede59abe5c4b0e790f8 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 164 3.1E-12 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS06490 eb2bc30914ba7ede59abe5c4b0e790f8 203 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL549_RS06490 eb2bc30914ba7ede59abe5c4b0e790f8 203 SUPERFAMILY SSF51161 3 194 3.05E-55 T 28-03-2018 IPR011004 Trimeric LpxA-like AL549_RS06490 eb2bc30914ba7ede59abe5c4b0e790f8 203 Pfam PF12464 Maltose acetyltransferase 6 57 6.2E-11 T 28-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL549_RS06490 eb2bc30914ba7ede59abe5c4b0e790f8 203 SMART SM01266 4 58 1.6E-16 T 28-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL549_RS01965 86c8425dbbb9122113c58f85a85d5bf4 675 SUPERFAMILY SSF55729 374 547 2.8E-12 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS01965 86c8425dbbb9122113c58f85a85d5bf4 675 Pfam PF05127 Helicase 181 348 1.3E-56 T 28-03-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 AL549_RS01965 86c8425dbbb9122113c58f85a85d5bf4 675 Gene3D G3DSA:3.40.630.30 372 555 8.2E-16 T 28-03-2018 AL549_RS01965 86c8425dbbb9122113c58f85a85d5bf4 675 SUPERFAMILY SSF52540 155 287 2.06E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS01965 86c8425dbbb9122113c58f85a85d5bf4 675 Pfam PF08351 Domain of unknown function (DUF1726) 69 114 9.5E-6 T 28-03-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 AL549_RS01965 86c8425dbbb9122113c58f85a85d5bf4 675 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 19 675 43.425 T 28-03-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 AL549_RS01965 86c8425dbbb9122113c58f85a85d5bf4 675 Pfam PF13718 GNAT acetyltransferase 2 383 497 7.3E-19 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS01965 86c8425dbbb9122113c58f85a85d5bf4 675 Gene3D G3DSA:3.40.50.300 151 326 1.4E-10 T 28-03-2018 AL549_RS07140 d005bca18200dd7dd02f5b7d50c47c6d 338 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 334 2.5E-41 T 28-03-2018 IPR000160 GGDEF domain AL549_RS07140 d005bca18200dd7dd02f5b7d50c47c6d 338 Gene3D G3DSA:3.30.70.270 172 337 4.3E-49 T 28-03-2018 AL549_RS07140 d005bca18200dd7dd02f5b7d50c47c6d 338 Gene3D G3DSA:1.10.1660.10 73 171 0.0031 T 28-03-2018 AL549_RS07140 d005bca18200dd7dd02f5b7d50c47c6d 338 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 176 335 3.7E-43 T 28-03-2018 IPR000160 GGDEF domain AL549_RS07140 d005bca18200dd7dd02f5b7d50c47c6d 338 SMART SM00267 168 338 9.7E-53 T 28-03-2018 IPR000160 GGDEF domain AL549_RS07140 d005bca18200dd7dd02f5b7d50c47c6d 338 SUPERFAMILY SSF55073 184 336 2.28E-42 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS22395 e4f488a79cb11383948b67531ab24c58 843 Gene3D G3DSA:3.30.70.270 430 590 2.6E-34 T 28-03-2018 AL549_RS22395 e4f488a79cb11383948b67531ab24c58 843 Gene3D G3DSA:3.20.20.450 591 843 1.8E-90 T 28-03-2018 IPR001633 EAL domain AL549_RS22395 e4f488a79cb11383948b67531ab24c58 843 Pfam PF00990 Diguanylate cyclase, GGDEF domain 431 575 2.1E-27 T 28-03-2018 IPR000160 GGDEF domain AL549_RS22395 e4f488a79cb11383948b67531ab24c58 843 SMART SM00052 592 839 2.7E-98 T 28-03-2018 IPR001633 EAL domain AL549_RS22395 e4f488a79cb11383948b67531ab24c58 843 SUPERFAMILY SSF55073 434 575 4.32E-29 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS22395 e4f488a79cb11383948b67531ab24c58 843 Pfam PF00563 EAL domain 599 834 1.3E-71 T 28-03-2018 IPR001633 EAL domain AL549_RS22395 e4f488a79cb11383948b67531ab24c58 843 Gene3D G3DSA:3.30.450.20 209 349 1.7E-14 T 28-03-2018 AL549_RS22395 e4f488a79cb11383948b67531ab24c58 843 SMART SM00267 418 582 1.6E-26 T 28-03-2018 IPR000160 GGDEF domain AL549_RS22395 e4f488a79cb11383948b67531ab24c58 843 Pfam PF02743 Cache domain 43 318 1.2E-18 T 28-03-2018 IPR033479 Double Cache domain 1 AL549_RS22395 e4f488a79cb11383948b67531ab24c58 843 SUPERFAMILY SSF158472 371 420 3.14E-8 T 28-03-2018 AL549_RS22395 e4f488a79cb11383948b67531ab24c58 843 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 426 575 1.4E-21 T 28-03-2018 IPR000160 GGDEF domain AL549_RS22395 e4f488a79cb11383948b67531ab24c58 843 Gene3D G3DSA:3.30.450.20 80 208 2.0E-17 T 28-03-2018 AL549_RS22395 e4f488a79cb11383948b67531ab24c58 843 SUPERFAMILY SSF141868 600 841 2.35E-80 T 28-03-2018 IPR001633 EAL domain AL549_RS22395 e4f488a79cb11383948b67531ab24c58 843 SMART SM00304 370 423 1.5E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS09215 eaeba016357bb984ee9912fb7d83ef91 375 Pfam PF07196 Flagellin hook IN motif 194 243 1.7E-5 T 28-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL549_RS09215 eaeba016357bb984ee9912fb7d83ef91 375 Pfam PF00700 Bacterial flagellin C-terminal helical region 290 374 7.6E-21 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL549_RS09215 eaeba016357bb984ee9912fb7d83ef91 375 SUPERFAMILY SSF64518 1 374 3.92E-78 T 28-03-2018 AL549_RS09215 eaeba016357bb984ee9912fb7d83ef91 375 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 2.1E-34 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL549_RS09215 eaeba016357bb984ee9912fb7d83ef91 375 PRINTS PR00207 Flagellin signature 75 94 5.1E-21 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL549_RS09215 eaeba016357bb984ee9912fb7d83ef91 375 PRINTS PR00207 Flagellin signature 36 53 5.1E-21 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL549_RS09215 eaeba016357bb984ee9912fb7d83ef91 375 PRINTS PR00207 Flagellin signature 110 133 5.1E-21 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL549_RS09215 eaeba016357bb984ee9912fb7d83ef91 375 Gene3D G3DSA:1.20.1330.10 39 347 4.9E-58 T 28-03-2018 AL549_RS20220 709dd45c367dd9b1524f4ccba535f0c0 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 4.1E-5 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL549_RS20220 709dd45c367dd9b1524f4ccba535f0c0 443 Gene3D G3DSA:1.10.8.60 335 431 2.0E-29 T 28-03-2018 AL549_RS20220 709dd45c367dd9b1524f4ccba535f0c0 443 SMART SM01086 335 429 3.3E-19 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL549_RS20220 709dd45c367dd9b1524f4ccba535f0c0 443 Gene3D G3DSA:1.10.8.10 201 243 1.2E-16 T 28-03-2018 AL549_RS20220 709dd45c367dd9b1524f4ccba535f0c0 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 2.7E-222 T 28-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AL549_RS20220 709dd45c367dd9b1524f4ccba535f0c0 443 SMART SM00382 49 332 7.8E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS20220 709dd45c367dd9b1524f4ccba535f0c0 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 100 8.7E-7 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL549_RS20220 709dd45c367dd9b1524f4ccba535f0c0 443 SUPERFAMILY SSF52540 3 441 1.68E-95 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20220 709dd45c367dd9b1524f4ccba535f0c0 443 Gene3D G3DSA:1.10.8.10 119 200 5.2E-31 T 28-03-2018 AL549_RS20220 709dd45c367dd9b1524f4ccba535f0c0 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.088 T 28-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AL549_RS20220 709dd45c367dd9b1524f4ccba535f0c0 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 171 329 1.5E-43 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL549_RS20220 709dd45c367dd9b1524f4ccba535f0c0 443 Gene3D G3DSA:3.40.50.300 46 118 4.6E-5 T 28-03-2018 AL549_RS17655 505518a4c0c18c4ce7d9882697791273 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 338 6.5E-38 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL549_RS17655 505518a4c0c18c4ce7d9882697791273 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 1.3E-150 T 28-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL549_RS17655 505518a4c0c18c4ce7d9882697791273 346 Gene3D G3DSA:3.30.1330.10 36 162 4.4E-54 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL549_RS17655 505518a4c0c18c4ce7d9882697791273 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 165 2.5E-15 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL549_RS17655 505518a4c0c18c4ce7d9882697791273 346 Gene3D G3DSA:3.90.650.10 172 346 3.2E-64 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL549_RS17655 505518a4c0c18c4ce7d9882697791273 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.545 T 28-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL549_RS17655 505518a4c0c18c4ce7d9882697791273 346 SUPERFAMILY SSF56042 172 342 2.84E-60 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL549_RS17655 505518a4c0c18c4ce7d9882697791273 346 SUPERFAMILY SSF55326 8 171 1.94E-54 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL549_RS09830 7d23a709cb3266856684ad3bdc77790a 446 Gene3D G3DSA:3.40.50.2300 2 140 7.8E-29 T 28-03-2018 AL549_RS09830 7d23a709cb3266856684ad3bdc77790a 446 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 9.0E-8 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS09830 7d23a709cb3266856684ad3bdc77790a 446 Gene3D G3DSA:1.10.8.60 317 396 2.2E-22 T 28-03-2018 AL549_RS09830 7d23a709cb3266856684ad3bdc77790a 446 Gene3D G3DSA:1.10.10.60 397 441 1.7E-14 T 28-03-2018 AL549_RS09830 7d23a709cb3266856684ad3bdc77790a 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL549_RS09830 7d23a709cb3266856684ad3bdc77790a 446 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL549_RS09830 7d23a709cb3266856684ad3bdc77790a 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL549_RS09830 7d23a709cb3266856684ad3bdc77790a 446 SUPERFAMILY SSF52540 144 373 7.05E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS09830 7d23a709cb3266856684ad3bdc77790a 446 SMART SM00448 2 114 2.0E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS09830 7d23a709cb3266856684ad3bdc77790a 446 Gene3D G3DSA:3.40.50.300 141 316 5.2E-26 T 28-03-2018 AL549_RS09830 7d23a709cb3266856684ad3bdc77790a 446 SUPERFAMILY SSF46689 387 440 9.86E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS09830 7d23a709cb3266856684ad3bdc77790a 446 SUPERFAMILY SSF52172 4 188 1.99E-38 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS09830 7d23a709cb3266856684ad3bdc77790a 446 SMART SM00382 164 307 2.0E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS09830 7d23a709cb3266856684ad3bdc77790a 446 Pfam PF00072 Response regulator receiver domain 5 114 9.5E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS09830 7d23a709cb3266856684ad3bdc77790a 446 Pfam PF00158 Sigma-54 interaction domain 144 310 1.3E-70 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL549_RS07650 99bede4586bd4c1907df51f9ced39e6b 470 Gene3D G3DSA:3.40.50.720 147 242 1.3E-16 T 28-03-2018 AL549_RS07650 99bede4586bd4c1907df51f9ced39e6b 470 Gene3D G3DSA:3.50.50.60 400 470 3.2E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS07650 99bede4586bd4c1907df51f9ced39e6b 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.1E-36 T 28-03-2018 AL549_RS07650 99bede4586bd4c1907df51f9ced39e6b 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 1.1E-36 T 28-03-2018 AL549_RS07650 99bede4586bd4c1907df51f9ced39e6b 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 1.1E-36 T 28-03-2018 AL549_RS07650 99bede4586bd4c1907df51f9ced39e6b 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 1.1E-36 T 28-03-2018 AL549_RS07650 99bede4586bd4c1907df51f9ced39e6b 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.1E-36 T 28-03-2018 AL549_RS07650 99bede4586bd4c1907df51f9ced39e6b 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 469 3.9E-253 T 28-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 AL549_RS07650 99bede4586bd4c1907df51f9ced39e6b 470 Gene3D G3DSA:1.10.1060.10 2 146 2.3E-41 T 28-03-2018 AL549_RS07650 99bede4586bd4c1907df51f9ced39e6b 470 SUPERFAMILY SSF51971 145 399 1.35E-69 T 28-03-2018 AL549_RS07650 99bede4586bd4c1907df51f9ced39e6b 470 SUPERFAMILY SSF46548 6 157 1.46E-40 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL549_RS07650 99bede4586bd4c1907df51f9ced39e6b 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 7.0E-39 T 28-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AL549_RS07650 99bede4586bd4c1907df51f9ced39e6b 470 Gene3D G3DSA:3.50.50.60 313 399 4.6E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS07650 99bede4586bd4c1907df51f9ced39e6b 470 Gene3D G3DSA:3.50.50.60 243 312 4.8E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS07650 99bede4586bd4c1907df51f9ced39e6b 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 7.0E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS15435 9abd3339a55863a8373b535359c3c013 391 Gene3D G3DSA:3.40.50.20 12 110 2.6E-21 T 28-03-2018 AL549_RS15435 9abd3339a55863a8373b535359c3c013 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 2.0E-188 T 28-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AL549_RS15435 9abd3339a55863a8373b535359c3c013 391 SUPERFAMILY SSF51246 317 389 1.35E-17 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL549_RS15435 9abd3339a55863a8373b535359c3c013 391 Pfam PF02222 ATP-grasp domain 121 293 5.3E-58 T 28-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AL549_RS15435 9abd3339a55863a8373b535359c3c013 391 Gene3D G3DSA:3.30.470.20 195 389 1.1E-35 T 28-03-2018 AL549_RS15435 9abd3339a55863a8373b535359c3c013 391 SUPERFAMILY SSF52440 2 110 6.91E-34 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL549_RS15435 9abd3339a55863a8373b535359c3c013 391 SUPERFAMILY SSF56059 111 313 1.94E-56 T 28-03-2018 AL549_RS15435 9abd3339a55863a8373b535359c3c013 391 Gene3D G3DSA:3.30.1490.20 127 194 1.0E-18 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL549_RS15435 9abd3339a55863a8373b535359c3c013 391 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 6 390 51.342 T 28-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AL549_RS15900 ae8758681f8645a398314df1430f937b 288 Gene3D G3DSA:3.40.1090.10 1 272 6.9E-25 T 28-03-2018 AL549_RS15900 ae8758681f8645a398314df1430f937b 288 Pfam PF01734 Patatin-like phospholipase 4 168 2.7E-14 T 28-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AL549_RS15900 ae8758681f8645a398314df1430f937b 288 SUPERFAMILY SSF52151 3 260 7.85E-32 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL549_RS04565 c5a4e02b0d8d9f246dd4d5c92487d547 758 Gene3D G3DSA:3.30.450.20 50 181 3.1E-8 T 28-03-2018 AL549_RS04565 c5a4e02b0d8d9f246dd4d5c92487d547 758 SMART SM00267 325 492 1.9E-52 T 28-03-2018 IPR000160 GGDEF domain AL549_RS04565 c5a4e02b0d8d9f246dd4d5c92487d547 758 SUPERFAMILY SSF141868 507 754 3.79E-83 T 28-03-2018 IPR001633 EAL domain AL549_RS04565 c5a4e02b0d8d9f246dd4d5c92487d547 758 Pfam PF00990 Diguanylate cyclase, GGDEF domain 336 486 8.7E-42 T 28-03-2018 IPR000160 GGDEF domain AL549_RS04565 c5a4e02b0d8d9f246dd4d5c92487d547 758 Gene3D G3DSA:3.30.70.270 330 499 1.0E-49 T 28-03-2018 AL549_RS04565 c5a4e02b0d8d9f246dd4d5c92487d547 758 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 332 488 8.1E-34 T 28-03-2018 IPR000160 GGDEF domain AL549_RS04565 c5a4e02b0d8d9f246dd4d5c92487d547 758 SMART SM00052 502 747 1.9E-101 T 28-03-2018 IPR001633 EAL domain AL549_RS04565 c5a4e02b0d8d9f246dd4d5c92487d547 758 Gene3D G3DSA:3.20.20.450 500 758 2.2E-90 T 28-03-2018 IPR001633 EAL domain AL549_RS04565 c5a4e02b0d8d9f246dd4d5c92487d547 758 Pfam PF00563 EAL domain 508 742 1.8E-68 T 28-03-2018 IPR001633 EAL domain AL549_RS04565 c5a4e02b0d8d9f246dd4d5c92487d547 758 SUPERFAMILY SSF55073 341 489 1.65E-40 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 SUPERFAMILY SSF82866 295 495 7.59E-32 T 28-03-2018 AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 SUPERFAMILY SSF82714 711 788 6.02E-11 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 Gene3D G3DSA:3.30.70.1430 555 656 9.3E-14 T 28-03-2018 AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 SUPERFAMILY SSF82714 187 269 2.35E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 Pfam PF00873 AcrB/AcrD/AcrF family 5 1007 3.6E-164 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 Gene3D G3DSA:3.30.2090.10 705 791 5.0E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 SUPERFAMILY SSF82693 41 137 3.66E-17 T 28-03-2018 AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 SUPERFAMILY SSF82866 792 1012 1.44E-44 T 28-03-2018 AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 Gene3D G3DSA:1.20.1640.10 286 506 8.0E-29 T 28-03-2018 AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 Gene3D G3DSA:1.20.1640.10 800 1011 3.8E-38 T 28-03-2018 AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 Gene3D G3DSA:3.30.70.1430 41 146 1.9E-28 T 28-03-2018 AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 Gene3D G3DSA:3.30.2090.10 183 271 1.5E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.4E-23 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.4E-23 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.4E-23 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.4E-23 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 1.4E-23 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 1.4E-23 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 SUPERFAMILY SSF82693 557 651 2.62E-6 T 28-03-2018 AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 SUPERFAMILY SSF82693 138 184 1.02E-18 T 28-03-2018 AL549_RS06825 c647c0aa921e0774517779a472d00e4c 1016 SUPERFAMILY SSF82693 272 324 1.02E-18 T 28-03-2018 AL549_RS08165 9b2e29ee9b0f8334758dd2a1d2e9dea7 437 PIRSF PIRSF001362 1 437 5.6E-224 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL549_RS08165 9b2e29ee9b0f8334758dd2a1d2e9dea7 437 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 28-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 AL549_RS08165 9b2e29ee9b0f8334758dd2a1d2e9dea7 437 Pfam PF00463 Isocitrate lyase family 15 257 1.2E-62 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL549_RS08165 9b2e29ee9b0f8334758dd2a1d2e9dea7 437 Pfam PF00463 Isocitrate lyase family 259 436 5.7E-53 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL549_RS08165 9b2e29ee9b0f8334758dd2a1d2e9dea7 437 Gene3D G3DSA:3.20.20.60 2 419 5.9E-148 T 28-03-2018 AL549_RS08165 9b2e29ee9b0f8334758dd2a1d2e9dea7 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 2.5E-90 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL549_RS08165 9b2e29ee9b0f8334758dd2a1d2e9dea7 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 11 257 8.9E-114 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL549_RS08165 9b2e29ee9b0f8334758dd2a1d2e9dea7 437 SUPERFAMILY SSF51621 6 436 6.28E-153 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL549_RS02040 7a9d9231a46637c8b1c47bd73b18917d 305 Pfam PF13353 4Fe-4S single cluster domain 19 112 2.3E-5 T 28-03-2018 AL549_RS02040 7a9d9231a46637c8b1c47bd73b18917d 305 Gene3D G3DSA:3.20.20.70 3 296 7.5E-19 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS02040 7a9d9231a46637c8b1c47bd73b18917d 305 SUPERFAMILY SSF102114 13 256 7.46E-25 T 28-03-2018 AL549_RS22170 cfe632d48942f1b7d9827ac0d6eba4d9 611 SMART SM00487 25 221 5.4E-28 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS22170 cfe632d48942f1b7d9827ac0d6eba4d9 611 Pfam PF09382 RQC domain 409 517 8.6E-37 T 28-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AL549_RS22170 cfe632d48942f1b7d9827ac0d6eba4d9 611 Pfam PF00570 HRDC domain 537 603 1.3E-22 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AL549_RS22170 cfe632d48942f1b7d9827ac0d6eba4d9 611 Gene3D G3DSA:1.10.10.10 406 526 6.5E-36 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS22170 cfe632d48942f1b7d9827ac0d6eba4d9 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 1.7E-189 T 28-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AL549_RS22170 cfe632d48942f1b7d9827ac0d6eba4d9 611 SUPERFAMILY SSF52540 17 203 1.08E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS22170 cfe632d48942f1b7d9827ac0d6eba4d9 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 606 1.9E-253 T 28-03-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 AL549_RS22170 cfe632d48942f1b7d9827ac0d6eba4d9 611 Gene3D G3DSA:1.10.150.80 527 611 4.1E-27 T 28-03-2018 AL549_RS22170 cfe632d48942f1b7d9827ac0d6eba4d9 611 Pfam PF00270 DEAD/DEAH box helicase 32 190 3.0E-18 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL549_RS22170 cfe632d48942f1b7d9827ac0d6eba4d9 611 SMART SM00341 533 611 2.9E-22 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AL549_RS22170 cfe632d48942f1b7d9827ac0d6eba4d9 611 Pfam PF16124 RecQ zinc-binding 346 407 8.7E-18 T 28-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AL549_RS22170 cfe632d48942f1b7d9827ac0d6eba4d9 611 SMART SM00490 253 334 4.0E-29 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS22170 cfe632d48942f1b7d9827ac0d6eba4d9 611 SUPERFAMILY SSF52540 211 458 1.3E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS22170 cfe632d48942f1b7d9827ac0d6eba4d9 611 SUPERFAMILY SSF47819 534 608 5.23E-26 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AL549_RS22170 cfe632d48942f1b7d9827ac0d6eba4d9 611 Pfam PF00271 Helicase conserved C-terminal domain 229 333 5.0E-20 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS22170 cfe632d48942f1b7d9827ac0d6eba4d9 611 Gene3D G3DSA:3.40.50.300 10 211 2.5E-33 T 28-03-2018 AL549_RS22170 cfe632d48942f1b7d9827ac0d6eba4d9 611 Gene3D G3DSA:3.40.50.300 213 405 2.1E-50 T 28-03-2018 AL549_RS22170 cfe632d48942f1b7d9827ac0d6eba4d9 611 SMART SM00956 414 517 3.0E-50 T 28-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AL549_RS19310 5662f1d48d2410929b59934af3c346af 298 Gene3D G3DSA:3.40.190.10 180 266 8.9E-9 T 28-03-2018 AL549_RS19310 5662f1d48d2410929b59934af3c346af 298 Gene3D G3DSA:3.40.190.10 94 179 9.2E-34 T 28-03-2018 AL549_RS19310 5662f1d48d2410929b59934af3c346af 298 SUPERFAMILY SSF46785 4 113 1.4E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS19310 5662f1d48d2410929b59934af3c346af 298 SUPERFAMILY SSF53850 95 295 4.52E-21 T 28-03-2018 AL549_RS19310 5662f1d48d2410929b59934af3c346af 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 1.3E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS19310 5662f1d48d2410929b59934af3c346af 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 295 1.2E-106 T 28-03-2018 IPR017685 HTH-type transcriptional regulator ArgP AL549_RS19310 5662f1d48d2410929b59934af3c346af 298 Gene3D G3DSA:1.10.10.10 1 88 6.5E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS19310 5662f1d48d2410929b59934af3c346af 298 Pfam PF03466 LysR substrate binding domain 95 274 2.5E-12 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS19310 5662f1d48d2410929b59934af3c346af 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS19310 5662f1d48d2410929b59934af3c346af 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS19310 5662f1d48d2410929b59934af3c346af 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS19310 5662f1d48d2410929b59934af3c346af 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 54.759 T 28-03-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria AL549_RS12525 f1431420457592e8b9018db436090bc5 56 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 46 2.0E-15 T 28-03-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AL549_RS12525 f1431420457592e8b9018db436090bc5 56 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 7.7E-21 T 28-03-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AL549_RS09915 4e391ef209e6ad9eef70413e4172b6cf 288 Gene3D G3DSA:1.10.12.10 228 276 1.5E-13 T 28-03-2018 IPR014748 Crontonase, C-terminal AL549_RS09915 4e391ef209e6ad9eef70413e4172b6cf 288 SUPERFAMILY SSF52096 19 284 1.14E-78 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS09915 4e391ef209e6ad9eef70413e4172b6cf 288 Gene3D G3DSA:3.90.226.10 5 225 2.6E-63 T 28-03-2018 AL549_RS09915 4e391ef209e6ad9eef70413e4172b6cf 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.633 T 28-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 AL549_RS09915 4e391ef209e6ad9eef70413e4172b6cf 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 2.0E-146 T 28-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 AL549_RS09915 4e391ef209e6ad9eef70413e4172b6cf 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 1.1E-77 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL549_RS09915 4e391ef209e6ad9eef70413e4172b6cf 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AL549_RS20845 f2d61f85d5ba42f4b46079441454725c 448 SUPERFAMILY SSF52440 1 113 4.6E-46 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL549_RS20845 f2d61f85d5ba42f4b46079441454725c 448 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 8.9E-38 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL549_RS20845 f2d61f85d5ba42f4b46079441454725c 448 SUPERFAMILY SSF56059 83 346 1.18E-68 T 28-03-2018 AL549_RS20845 f2d61f85d5ba42f4b46079441454725c 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL549_RS20845 f2d61f85d5ba42f4b46079441454725c 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 2.5E-83 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL549_RS20845 f2d61f85d5ba42f4b46079441454725c 448 Gene3D G3DSA:3.40.50.20 1 123 1.7E-50 T 28-03-2018 AL549_RS20845 f2d61f85d5ba42f4b46079441454725c 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 1.3E-243 T 28-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AL549_RS20845 f2d61f85d5ba42f4b46079441454725c 448 SMART SM00878 336 441 6.3E-65 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL549_RS20845 f2d61f85d5ba42f4b46079441454725c 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL549_RS20845 f2d61f85d5ba42f4b46079441454725c 448 SUPERFAMILY SSF51246 331 444 9.94E-44 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL549_RS20845 f2d61f85d5ba42f4b46079441454725c 448 Gene3D G3DSA:3.30.1490.20 124 210 9.7E-20 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL549_RS20845 f2d61f85d5ba42f4b46079441454725c 448 Gene3D G3DSA:3.30.470.20 211 444 3.6E-99 T 28-03-2018 AL549_RS20845 f2d61f85d5ba42f4b46079441454725c 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.9E-43 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL549_RS00440 b6859b7303955da20bed52da98e7f826 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 1.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00440 b6859b7303955da20bed52da98e7f826 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 1.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00440 b6859b7303955da20bed52da98e7f826 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 1.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00440 b6859b7303955da20bed52da98e7f826 199 SUPERFAMILY SSF46894 127 196 1.9E-16 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS00440 b6859b7303955da20bed52da98e7f826 199 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00440 b6859b7303955da20bed52da98e7f826 199 SUPERFAMILY SSF52172 4 129 3.27E-27 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS00440 b6859b7303955da20bed52da98e7f826 199 SMART SM00448 5 118 1.7E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS00440 b6859b7303955da20bed52da98e7f826 199 Gene3D G3DSA:3.40.50.2300 2 129 2.3E-25 T 28-03-2018 AL549_RS00440 b6859b7303955da20bed52da98e7f826 199 Gene3D G3DSA:1.10.10.10 132 198 7.8E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00440 b6859b7303955da20bed52da98e7f826 199 Pfam PF00072 Response regulator receiver domain 8 118 8.0E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS00440 b6859b7303955da20bed52da98e7f826 199 SMART SM00421 140 197 6.8E-17 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00440 b6859b7303955da20bed52da98e7f826 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 196 2.8E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS08805 8f626a3091c4810b8a4a8c241eb9e6c2 218 SUPERFAMILY SSF55681 3 205 6.55E-71 T 28-03-2018 AL549_RS08805 8f626a3091c4810b8a4a8c241eb9e6c2 218 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 3.0E-25 T 28-03-2018 AL549_RS08805 8f626a3091c4810b8a4a8c241eb9e6c2 218 Gene3D G3DSA:3.30.930.10 1 203 1.8E-63 T 28-03-2018 AL549_RS08805 8f626a3091c4810b8a4a8c241eb9e6c2 218 PIRSF PIRSF016262 1 217 7.2E-63 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL549_RS08805 8f626a3091c4810b8a4a8c241eb9e6c2 218 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 28-03-2018 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AL549_RS08805 8f626a3091c4810b8a4a8c241eb9e6c2 218 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 25 203 6.4E-72 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL549_RS08805 8f626a3091c4810b8a4a8c241eb9e6c2 218 Pfam PF03099 Biotin/lipoate A/B protein ligase family 58 158 2.4E-8 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AL549_RS08805 8f626a3091c4810b8a4a8c241eb9e6c2 218 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 38.414 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL549_RS19885 24264c242f84347e898982c1f679eca0 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL549_RS19885 24264c242f84347e898982c1f679eca0 373 Gene3D G3DSA:3.90.1150.10 265 373 5.6E-35 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS19885 24264c242f84347e898982c1f679eca0 373 SUPERFAMILY SSF53383 9 371 2.64E-102 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS19885 24264c242f84347e898982c1f679eca0 373 Gene3D G3DSA:3.40.640.10 22 264 7.2E-37 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS19885 24264c242f84347e898982c1f679eca0 373 Pfam PF00266 Aminotransferase class-V 13 356 2.5E-37 T 28-03-2018 IPR000192 Aminotransferase class V domain AL549_RS19885 24264c242f84347e898982c1f679eca0 373 PIRSF PIRSF000524 5 373 6.4E-112 T 28-03-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 AL549_RS02360 b873bc0208c6d8bbbd69569a0c434e3a 158 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 152 4.2E-34 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AL549_RS02360 b873bc0208c6d8bbbd69569a0c434e3a 158 SUPERFAMILY SSF55804 5 152 1.83E-32 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS02360 b873bc0208c6d8bbbd69569a0c434e3a 158 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain AL549_RS02360 b873bc0208c6d8bbbd69569a0c434e3a 158 Gene3D G3DSA:3.40.930.10 2 153 2.3E-30 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS06020 3de1fd07762746bf649a0a278005313c 431 Gene3D G3DSA:1.10.10.60 380 425 4.9E-14 T 28-03-2018 AL549_RS06020 3de1fd07762746bf649a0a278005313c 431 Gene3D G3DSA:3.40.50.300 148 299 9.5E-11 T 28-03-2018 AL549_RS06020 3de1fd07762746bf649a0a278005313c 431 SUPERFAMILY SSF52540 152 356 1.21E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06020 3de1fd07762746bf649a0a278005313c 431 SUPERFAMILY SSF52172 14 197 7.26E-36 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS06020 3de1fd07762746bf649a0a278005313c 431 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 340 349 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL549_RS06020 3de1fd07762746bf649a0a278005313c 431 Gene3D G3DSA:1.10.8.60 300 379 1.6E-21 T 28-03-2018 AL549_RS06020 3de1fd07762746bf649a0a278005313c 431 SUPERFAMILY SSF46689 373 423 1.22E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS06020 3de1fd07762746bf649a0a278005313c 431 Gene3D G3DSA:3.40.50.2300 13 147 4.6E-30 T 28-03-2018 AL549_RS06020 3de1fd07762746bf649a0a278005313c 431 SMART SM00448 16 127 6.9E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS06020 3de1fd07762746bf649a0a278005313c 431 Pfam PF02954 Bacterial regulatory protein, Fis family 381 421 5.6E-9 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS06020 3de1fd07762746bf649a0a278005313c 431 Pfam PF14532 Sigma-54 interaction domain 153 298 9.5E-18 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL549_RS06020 3de1fd07762746bf649a0a278005313c 431 Pfam PF00072 Response regulator receiver domain 18 127 1.0E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS23375 1802912bed60b58f05ab43f4128315c8 338 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 28-03-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL549_RS23375 1802912bed60b58f05ab43f4128315c8 338 PIRSF PIRSF000904 1 337 9.2E-125 T 28-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL549_RS23375 1802912bed60b58f05ab43f4128315c8 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 2.6E-76 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL549_RS23375 1802912bed60b58f05ab43f4128315c8 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 2.6E-76 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL549_RS23375 1802912bed60b58f05ab43f4128315c8 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 2.6E-76 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL549_RS23375 1802912bed60b58f05ab43f4128315c8 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 2.6E-76 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL549_RS23375 1802912bed60b58f05ab43f4128315c8 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 2.6E-76 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL549_RS23375 1802912bed60b58f05ab43f4128315c8 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 2.6E-76 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL549_RS23375 1802912bed60b58f05ab43f4128315c8 338 Gene3D G3DSA:3.30.540.10 9 202 5.3E-64 T 28-03-2018 AL549_RS23375 1802912bed60b58f05ab43f4128315c8 338 SUPERFAMILY SSF56655 3 331 4.65E-114 T 28-03-2018 AL549_RS23375 1802912bed60b58f05ab43f4128315c8 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.0E-77 T 28-03-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL549_RS23375 1802912bed60b58f05ab43f4128315c8 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 42.886 T 28-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL549_RS23375 1802912bed60b58f05ab43f4128315c8 338 PIRSF PIRSF500210 1 336 2.0E-127 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL549_RS23375 1802912bed60b58f05ab43f4128315c8 338 Gene3D G3DSA:3.40.190.80 203 334 7.6E-59 T 28-03-2018 AL549_RS22870 e7d43e0a03672f6f09f023475257c7d7 374 SUPERFAMILY SSF56796 10 373 2.36E-76 T 28-03-2018 AL549_RS22870 e7d43e0a03672f6f09f023475257c7d7 374 Gene3D G3DSA:1.20.1090.10 188 374 4.5E-36 T 28-03-2018 AL549_RS22870 e7d43e0a03672f6f09f023475257c7d7 374 Gene3D G3DSA:3.40.50.1970 9 187 2.3E-32 T 28-03-2018 AL549_RS22870 e7d43e0a03672f6f09f023475257c7d7 374 Pfam PF00465 Iron-containing alcohol dehydrogenase 16 366 1.9E-77 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL549_RS06255 f4cfb24b7dd984e2a7937d06d7c3c42b 362 Gene3D G3DSA:3.40.50.410 100 324 3.7E-41 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS06255 f4cfb24b7dd984e2a7937d06d7c3c42b 362 SUPERFAMILY SSF53300 103 299 9.64E-36 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS06255 f4cfb24b7dd984e2a7937d06d7c3c42b 362 Pfam PF00092 von Willebrand factor type A domain 107 294 2.5E-25 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS06255 f4cfb24b7dd984e2a7937d06d7c3c42b 362 SMART SM00327 105 304 1.8E-24 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS10420 494cf37a089f5eb44e343e22287c0425 476 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 69 87 - T 28-03-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 AL549_RS10420 494cf37a089f5eb44e343e22287c0425 476 Gene3D G3DSA:3.20.20.70 279 476 2.4E-58 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS10420 494cf37a089f5eb44e343e22287c0425 476 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 277 476 30.137 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AL549_RS10420 494cf37a089f5eb44e343e22287c0425 476 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 279 470 3.9E-54 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AL549_RS10420 494cf37a089f5eb44e343e22287c0425 476 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 22 276 34.903 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AL549_RS10420 494cf37a089f5eb44e343e22287c0425 476 Pfam PF00218 Indole-3-glycerol phosphate synthase 24 273 2.2E-96 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AL549_RS10420 494cf37a089f5eb44e343e22287c0425 476 Gene3D G3DSA:3.20.20.70 23 275 1.1E-60 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS10420 494cf37a089f5eb44e343e22287c0425 476 SUPERFAMILY SSF51366 279 474 6.28E-56 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL549_RS10420 494cf37a089f5eb44e343e22287c0425 476 SUPERFAMILY SSF51366 20 273 1.53E-79 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL549_RS22325 8a0b1f0ae437e97cc5688fe859515cdc 201 SUPERFAMILY SSF55718 13 117 4.71E-10 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AL549_RS22325 8a0b1f0ae437e97cc5688fe859515cdc 201 Pfam PF02036 SCP-2 sterol transfer family 18 111 4.2E-22 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AL549_RS22325 8a0b1f0ae437e97cc5688fe859515cdc 201 Gene3D G3DSA:3.30.1050.10 10 121 1.1E-8 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AL549_RS21895 82c236552c9bbda8689d49e357f768b7 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 322 8.6E-40 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL549_RS21895 82c236552c9bbda8689d49e357f768b7 548 Gene3D G3DSA:3.40.50.970 329 535 3.7E-45 T 28-03-2018 AL549_RS21895 82c236552c9bbda8689d49e357f768b7 548 SUPERFAMILY SSF52518 1 178 1.72E-62 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS21895 82c236552c9bbda8689d49e357f768b7 548 SUPERFAMILY SSF52518 358 545 2.5E-66 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS21895 82c236552c9bbda8689d49e357f768b7 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 1.0E-55 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL549_RS21895 82c236552c9bbda8689d49e357f768b7 548 SUPERFAMILY SSF52467 182 342 5.57E-55 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL549_RS21895 82c236552c9bbda8689d49e357f768b7 548 Gene3D G3DSA:3.40.50.1220 186 327 1.1E-44 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL549_RS21895 82c236552c9bbda8689d49e357f768b7 548 Gene3D G3DSA:3.40.50.970 1 185 2.3E-62 T 28-03-2018 AL549_RS21895 82c236552c9bbda8689d49e357f768b7 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 3.2E-210 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL549_RS21895 82c236552c9bbda8689d49e357f768b7 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AL549_RS21895 82c236552c9bbda8689d49e357f768b7 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 1.8E-48 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL549_RS23475 ed48143c9a87bf3ecd03a8452c70a2ab 267 Pfam PF00005 ABC transporter 23 170 1.4E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS23475 ed48143c9a87bf3ecd03a8452c70a2ab 267 Gene3D G3DSA:3.40.50.300 3 262 2.3E-64 T 28-03-2018 AL549_RS23475 ed48143c9a87bf3ecd03a8452c70a2ab 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS23475 ed48143c9a87bf3ecd03a8452c70a2ab 267 SMART SM00382 31 228 6.1E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS23475 ed48143c9a87bf3ecd03a8452c70a2ab 267 SUPERFAMILY SSF52540 6 242 2.21E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS08215 2c652cad16a9467cdacfdd7d8587ff31 267 Gene3D G3DSA:3.30.540.10 1 149 1.9E-45 T 28-03-2018 AL549_RS08215 2c652cad16a9467cdacfdd7d8587ff31 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 28-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AL549_RS08215 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 2.2E-33 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL549_RS08215 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 2.2E-33 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL549_RS08215 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 2.2E-33 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL549_RS08215 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 2.2E-33 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL549_RS08215 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 6.0E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL549_RS08215 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 6.0E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL549_RS08215 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 6.0E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL549_RS08215 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 6.0E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL549_RS08215 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 6.0E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL549_RS08215 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 6.0E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL549_RS08215 2c652cad16a9467cdacfdd7d8587ff31 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site AL549_RS08215 2c652cad16a9467cdacfdd7d8587ff31 267 SUPERFAMILY SSF56655 1 259 2.49E-85 T 28-03-2018 AL549_RS08215 2c652cad16a9467cdacfdd7d8587ff31 267 Pfam PF00459 Inositol monophosphatase family 2 258 8.8E-71 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL549_RS08215 2c652cad16a9467cdacfdd7d8587ff31 267 Gene3D G3DSA:3.40.190.80 150 267 7.4E-37 T 28-03-2018 AL549_RS18075 b52ccfdae467b859f7cb86362a8e5b3b 264 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 264 9.2E-98 T 28-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AL549_RS18075 b52ccfdae467b859f7cb86362a8e5b3b 264 Gene3D G3DSA:2.40.230.20 25 264 8.8E-83 T 28-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AL549_RS18075 b52ccfdae467b859f7cb86362a8e5b3b 264 SUPERFAMILY SSF111364 30 264 9.55E-85 T 28-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AL549_RS18075 b52ccfdae467b859f7cb86362a8e5b3b 264 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 52 76 9.9E-6 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AL549_RS18075 b52ccfdae467b859f7cb86362a8e5b3b 264 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 144 169 9.9E-6 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AL549_RS18075 b52ccfdae467b859f7cb86362a8e5b3b 264 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 109 129 9.9E-6 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AL549_RS20315 3cfbd80e08449e53f142d7f317f8af48 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 1.1E-54 T 28-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 AL549_RS20315 3cfbd80e08449e53f142d7f317f8af48 131 SUPERFAMILY SSF75169 6 131 2.94E-38 T 28-03-2018 IPR027396 DsrEFH-like AL549_RS20315 3cfbd80e08449e53f142d7f317f8af48 131 Gene3D G3DSA:3.40.1260.10 4 131 3.2E-30 T 28-03-2018 AL549_RS20315 3cfbd80e08449e53f142d7f317f8af48 131 Pfam PF02635 DsrE/DsrF-like family 6 131 3.6E-29 T 28-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein AL549_RS22080 e09e6945ea956a4dfcabfb69816a1bed 444 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 224 411 5.8E-44 T 28-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL549_RS22080 e09e6945ea956a4dfcabfb69816a1bed 444 Pfam PF02581 Thiamine monophosphate synthase 222 400 2.0E-53 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL549_RS22080 e09e6945ea956a4dfcabfb69816a1bed 444 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 189 418 19.025 T 28-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL549_RS22080 e09e6945ea956a4dfcabfb69816a1bed 444 SUPERFAMILY SSF51391 211 417 8.24E-61 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL549_RS22080 e09e6945ea956a4dfcabfb69816a1bed 444 Gene3D G3DSA:3.20.20.70 139 418 2.7E-37 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS12100 09e70b9d2d4175a3f590ad815a0992c7 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 3.8E-31 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS12100 09e70b9d2d4175a3f590ad815a0992c7 342 SUPERFAMILY SSF53850 29 259 2.45E-50 T 28-03-2018 AL549_RS12100 09e70b9d2d4175a3f590ad815a0992c7 342 Gene3D G3DSA:3.40.190.10 28 140 5.3E-20 T 28-03-2018 AL549_RS12100 09e70b9d2d4175a3f590ad815a0992c7 342 Gene3D G3DSA:3.40.190.10 141 230 3.7E-18 T 28-03-2018 AL549_RS12100 09e70b9d2d4175a3f590ad815a0992c7 342 SMART SM00062 38 267 2.1E-56 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS04590 2f4a666b421449c39a30884e0d2b4060 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.543 T 28-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL549_RS04590 2f4a666b421449c39a30884e0d2b4060 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 28-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL549_RS04590 2f4a666b421449c39a30884e0d2b4060 217 Pfam PF01227 GTP cyclohydrolase I 38 215 4.5E-64 T 28-03-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL549_RS04590 2f4a666b421449c39a30884e0d2b4060 217 Gene3D G3DSA:1.10.286.10 7 83 1.2E-24 T 28-03-2018 AL549_RS04590 2f4a666b421449c39a30884e0d2b4060 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 3.2E-79 T 28-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL549_RS04590 2f4a666b421449c39a30884e0d2b4060 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 28-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL549_RS04590 2f4a666b421449c39a30884e0d2b4060 217 Gene3D G3DSA:3.30.1130.10 87 217 2.5E-46 T 28-03-2018 AL549_RS04590 2f4a666b421449c39a30884e0d2b4060 217 SUPERFAMILY SSF55620 9 216 8.15E-74 T 28-03-2018 AL549_RS04570 71e78bafc59f698e5aa9b84ead672b88 276 SUPERFAMILY SSF52821 156 275 1.01E-31 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS04570 71e78bafc59f698e5aa9b84ead672b88 276 SMART SM00450 152 272 6.2E-19 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS04570 71e78bafc59f698e5aa9b84ead672b88 276 SMART SM00450 5 128 6.9E-15 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS04570 71e78bafc59f698e5aa9b84ead672b88 276 Gene3D G3DSA:3.40.250.10 1 149 3.9E-27 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS04570 71e78bafc59f698e5aa9b84ead672b88 276 SUPERFAMILY SSF52821 2 135 2.75E-33 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS04570 71e78bafc59f698e5aa9b84ead672b88 276 Pfam PF00581 Rhodanese-like domain 160 268 3.3E-11 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS04570 71e78bafc59f698e5aa9b84ead672b88 276 Pfam PF00581 Rhodanese-like domain 6 123 6.4E-15 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS04570 71e78bafc59f698e5aa9b84ead672b88 276 Gene3D G3DSA:3.40.250.10 150 276 2.8E-25 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS15935 b2f8fa0e235914ab8d7c22d9e56bd527 911 SMART SM00267 475 638 2.0E-7 T 28-03-2018 IPR000160 GGDEF domain AL549_RS15935 b2f8fa0e235914ab8d7c22d9e56bd527 911 SUPERFAMILY SSF55785 354 472 1.15E-11 T 28-03-2018 IPR000014 PAS domain AL549_RS15935 b2f8fa0e235914ab8d7c22d9e56bd527 911 Pfam PF13426 PAS domain 374 474 8.6E-11 T 28-03-2018 IPR000014 PAS domain AL549_RS15935 b2f8fa0e235914ab8d7c22d9e56bd527 911 SUPERFAMILY SSF141868 659 907 1.14E-80 T 28-03-2018 IPR001633 EAL domain AL549_RS15935 b2f8fa0e235914ab8d7c22d9e56bd527 911 Gene3D G3DSA:3.30.70.270 487 651 3.8E-18 T 28-03-2018 AL549_RS15935 b2f8fa0e235914ab8d7c22d9e56bd527 911 SMART SM00052 653 903 6.0E-97 T 28-03-2018 IPR001633 EAL domain AL549_RS15935 b2f8fa0e235914ab8d7c22d9e56bd527 911 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 361 480 1.4E-9 T 28-03-2018 IPR000014 PAS domain AL549_RS15935 b2f8fa0e235914ab8d7c22d9e56bd527 911 Pfam PF05228 CHASE4 domain 60 216 4.1E-27 T 28-03-2018 IPR007892 CHASE4 AL549_RS15935 b2f8fa0e235914ab8d7c22d9e56bd527 911 SUPERFAMILY SSF55073 492 633 6.75E-16 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS15935 b2f8fa0e235914ab8d7c22d9e56bd527 911 Gene3D G3DSA:3.20.20.450 652 911 1.7E-86 T 28-03-2018 IPR001633 EAL domain AL549_RS15935 b2f8fa0e235914ab8d7c22d9e56bd527 911 Pfam PF00990 Diguanylate cyclase, GGDEF domain 488 617 6.6E-13 T 28-03-2018 IPR000160 GGDEF domain AL549_RS15935 b2f8fa0e235914ab8d7c22d9e56bd527 911 Pfam PF00563 EAL domain 659 898 2.8E-70 T 28-03-2018 IPR001633 EAL domain AL549_RS15935 b2f8fa0e235914ab8d7c22d9e56bd527 911 Gene3D G3DSA:3.30.450.20 348 486 2.3E-14 T 28-03-2018 AL549_RS06415 a1d0b65d779c4e600c4360cc6a0bd3be 151 Gene3D G3DSA:3.40.50.1380 1 151 5.7E-45 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL549_RS06415 a1d0b65d779c4e600c4360cc6a0bd3be 151 SMART SM00851 25 118 3.3E-24 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL549_RS06415 a1d0b65d779c4e600c4360cc6a0bd3be 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 36.202 T 28-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AL549_RS06415 a1d0b65d779c4e600c4360cc6a0bd3be 151 PIRSF PIRSF006614 8 151 7.2E-64 T 28-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AL549_RS06415 a1d0b65d779c4e600c4360cc6a0bd3be 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 28-03-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AL549_RS06415 a1d0b65d779c4e600c4360cc6a0bd3be 151 SUPERFAMILY SSF52335 3 150 1.31E-58 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL549_RS06415 a1d0b65d779c4e600c4360cc6a0bd3be 151 Pfam PF02142 MGS-like domain 25 118 5.4E-19 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL549_RS06415 a1d0b65d779c4e600c4360cc6a0bd3be 151 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 9.4E-65 T 28-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AL549_RS10605 821a17a12118fd33821468a4e0250515 228 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 228 9.4E-134 T 28-03-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein AL549_RS10605 821a17a12118fd33821468a4e0250515 228 Gene3D G3DSA:3.30.70.20 26 55 5.7E-4 T 28-03-2018 AL549_RS10605 821a17a12118fd33821468a4e0250515 228 Gene3D G3DSA:3.30.70.20 116 151 2.6E-20 T 28-03-2018 AL549_RS10605 821a17a12118fd33821468a4e0250515 228 Gene3D G3DSA:3.30.70.20 152 228 1.9E-23 T 28-03-2018 AL549_RS10605 821a17a12118fd33821468a4e0250515 228 Pfam PF12800 4Fe-4S binding domain 52 63 0.28 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS10605 821a17a12118fd33821468a4e0250515 228 Gene3D G3DSA:3.30.70.20 56 115 7.6E-17 T 28-03-2018 AL549_RS10605 821a17a12118fd33821468a4e0250515 228 SUPERFAMILY SSF54862 42 224 2.62E-63 T 28-03-2018 AL549_RS10605 821a17a12118fd33821468a4e0250515 228 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 132 143 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS10605 821a17a12118fd33821468a4e0250515 228 Pfam PF13247 4Fe-4S dicluster domain 91 188 4.2E-26 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS18410 37507d0b468ccd25a9a5e61b7a8b9073 511 SUPERFAMILY SSF55073 371 508 1.57E-31 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS18410 37507d0b468ccd25a9a5e61b7a8b9073 511 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 365 508 3.1E-24 T 28-03-2018 IPR000160 GGDEF domain AL549_RS18410 37507d0b468ccd25a9a5e61b7a8b9073 511 SMART SM00267 356 511 2.4E-29 T 28-03-2018 IPR000160 GGDEF domain AL549_RS18410 37507d0b468ccd25a9a5e61b7a8b9073 511 Gene3D G3DSA:3.30.70.270 350 511 3.0E-35 T 28-03-2018 AL549_RS18410 37507d0b468ccd25a9a5e61b7a8b9073 511 Pfam PF07695 7TM diverse intracellular signalling 151 343 2.0E-17 T 28-03-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 AL549_RS18410 37507d0b468ccd25a9a5e61b7a8b9073 511 Pfam PF00990 Diguanylate cyclase, GGDEF domain 366 507 4.4E-28 T 28-03-2018 IPR000160 GGDEF domain AL549_RS18410 37507d0b468ccd25a9a5e61b7a8b9073 511 Gene3D G3DSA:2.60.120.380 33 131 0.0013 T 28-03-2018 AL549_RS09620 becabf95160719e8b10b46dcf0bf4837 93 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 69 5.0E-35 T 28-03-2018 IPR027354 YcgL domain AL549_RS09620 becabf95160719e8b10b46dcf0bf4837 93 SUPERFAMILY SSF160191 1 91 1.44E-37 T 28-03-2018 AL549_RS09620 becabf95160719e8b10b46dcf0bf4837 93 Pfam PF05166 YcgL domain 3 74 1.8E-31 T 28-03-2018 IPR027354 YcgL domain AL549_RS09620 becabf95160719e8b10b46dcf0bf4837 93 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.24 T 28-03-2018 IPR027354 YcgL domain AL549_RS12435 f75e4ebee9e3f2a7277920cc6675e685 639 SUPERFAMILY SSF52540 126 238 3.58E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS12435 f75e4ebee9e3f2a7277920cc6675e685 639 SUPERFAMILY SSF52540 4 94 3.58E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS12435 f75e4ebee9e3f2a7277920cc6675e685 639 Pfam PF12848 ABC transporter 224 296 3.3E-11 T 28-03-2018 IPR032781 ABC-transporter extension domain AL549_RS12435 f75e4ebee9e3f2a7277920cc6675e685 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS12435 f75e4ebee9e3f2a7277920cc6675e685 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS12435 f75e4ebee9e3f2a7277920cc6675e685 639 SUPERFAMILY SSF52540 312 521 4.56E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS12435 f75e4ebee9e3f2a7277920cc6675e685 639 Gene3D G3DSA:3.40.50.300 292 551 8.4E-58 T 28-03-2018 AL549_RS12435 f75e4ebee9e3f2a7277920cc6675e685 639 SMART SM00382 28 230 2.9E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS12435 f75e4ebee9e3f2a7277920cc6675e685 639 SMART SM00382 344 514 3.6E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS12435 f75e4ebee9e3f2a7277920cc6675e685 639 Gene3D G3DSA:3.40.50.300 14 94 4.2E-8 T 28-03-2018 AL549_RS12435 f75e4ebee9e3f2a7277920cc6675e685 639 Pfam PF16326 ABC transporter C-terminal domain 565 633 2.5E-20 T 28-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AL549_RS12435 f75e4ebee9e3f2a7277920cc6675e685 639 Gene3D G3DSA:3.40.50.300 97 291 6.7E-44 T 28-03-2018 AL549_RS12435 f75e4ebee9e3f2a7277920cc6675e685 639 Pfam PF00005 ABC transporter 19 185 9.0E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS12435 f75e4ebee9e3f2a7277920cc6675e685 639 Pfam PF00005 ABC transporter 336 469 1.1E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS00890 da71150678c92939f5343c0f65d8dd61 543 Pfam PF04231 Endonuclease I 300 535 4.1E-101 T 28-03-2018 IPR007346 Endonuclease I GO:0004518 AL549_RS00890 da71150678c92939f5343c0f65d8dd61 543 SUPERFAMILY SSF54060 296 535 4.47E-49 T 28-03-2018 AL549_RS00890 da71150678c92939f5343c0f65d8dd61 543 Gene3D G3DSA:2.60.120.260 22 165 6.1E-19 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS00890 da71150678c92939f5343c0f65d8dd61 543 SUPERFAMILY SSF49785 23 164 4.76E-29 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS00890 da71150678c92939f5343c0f65d8dd61 543 Pfam PF02018 Carbohydrate binding domain 21 135 2.0E-9 T 28-03-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 AL549_RS00975 090478107e9f0fea7be8ec296f47281a 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 2.7E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS00975 090478107e9f0fea7be8ec296f47281a 201 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 144 198 8.8E-12 T 28-03-2018 AL549_RS00975 090478107e9f0fea7be8ec296f47281a 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.3E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS00975 090478107e9f0fea7be8ec296f47281a 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.3E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS00975 090478107e9f0fea7be8ec296f47281a 201 SUPERFAMILY SSF46689 6 76 1.55E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS00975 090478107e9f0fea7be8ec296f47281a 201 Gene3D G3DSA:1.10.10.60 5 65 3.5E-16 T 28-03-2018 AL549_RS00975 090478107e9f0fea7be8ec296f47281a 201 Gene3D G3DSA:1.10.357.10 66 201 1.2E-16 T 28-03-2018 AL549_RS00975 090478107e9f0fea7be8ec296f47281a 201 SUPERFAMILY SSF48498 84 199 8.4E-8 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL549_RS18925 83136e13ca19a2024dddc9159f0c3b6b 202 Pfam PF01121 Dephospho-CoA kinase 3 181 2.2E-76 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AL549_RS18925 83136e13ca19a2024dddc9159f0c3b6b 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 27.712 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AL549_RS18925 83136e13ca19a2024dddc9159f0c3b6b 202 SUPERFAMILY SSF52540 1 193 1.97E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18925 83136e13ca19a2024dddc9159f0c3b6b 202 Gene3D G3DSA:3.40.50.300 2 202 3.0E-40 T 28-03-2018 AL549_RS18925 83136e13ca19a2024dddc9159f0c3b6b 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 188 1.0E-67 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AL549_RS23730 49093642fe448de279058b007c61c618 624 Pfam PF04546 Sigma-70, non-essential region 139 359 4.5E-68 T 28-03-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS23730 49093642fe448de279058b007c61c618 624 SUPERFAMILY SSF88659 463 536 2.25E-20 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS23730 49093642fe448de279058b007c61c618 624 Gene3D G3DSA:1.10.601.10 13 114 2.5E-14 T 28-03-2018 AL549_RS23730 49093642fe448de279058b007c61c618 624 Gene3D G3DSA:1.10.601.10 115 459 1.7E-102 T 28-03-2018 AL549_RS23730 49093642fe448de279058b007c61c618 624 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 386 611 1.5E-37 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS23730 49093642fe448de279058b007c61c618 624 Gene3D G3DSA:1.10.10.10 553 623 8.4E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS23730 49093642fe448de279058b007c61c618 624 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 414 427 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS23730 49093642fe448de279058b007c61c618 624 Gene3D G3DSA:1.10.10.10 460 510 6.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS23730 49093642fe448de279058b007c61c618 624 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 583 609 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS23730 49093642fe448de279058b007c61c618 624 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 623 45.832 T 28-03-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AL549_RS23730 49093642fe448de279058b007c61c618 624 SUPERFAMILY SSF88659 520 622 1.37E-25 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS23730 49093642fe448de279058b007c61c618 624 Pfam PF03979 Sigma-70 factor, region 1.1 5 80 2.2E-28 T 28-03-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AL549_RS23730 49093642fe448de279058b007c61c618 624 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.8E-12 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS23730 49093642fe448de279058b007c61c618 624 SUPERFAMILY SSF88946 115 457 1.44E-97 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS23730 49093642fe448de279058b007c61c618 624 Pfam PF04542 Sigma-70 region 2 390 459 1.7E-21 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS23730 49093642fe448de279058b007c61c618 624 Pfam PF04539 Sigma-70 region 3 469 544 1.3E-28 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS23730 49093642fe448de279058b007c61c618 624 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 386 622 1.5E-120 T 28-03-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AL549_RS23730 49093642fe448de279058b007c61c618 624 Pfam PF04545 Sigma-70, region 4 558 611 1.8E-19 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS23730 49093642fe448de279058b007c61c618 624 PRINTS PR00046 Major sigma-70 factor signature 414 427 3.3E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS23730 49093642fe448de279058b007c61c618 624 PRINTS PR00046 Major sigma-70 factor signature 583 598 3.3E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS23730 49093642fe448de279058b007c61c618 624 PRINTS PR00046 Major sigma-70 factor signature 438 446 3.3E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS23730 49093642fe448de279058b007c61c618 624 PRINTS PR00046 Major sigma-70 factor signature 562 574 3.3E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS23730 49093642fe448de279058b007c61c618 624 PRINTS PR00046 Major sigma-70 factor signature 598 609 3.3E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 SUPERFAMILY SSF88723 7 170 1.86E-58 T 28-03-2018 IPR029060 PIN domain-like AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:3.30.420.10 322 544 3.7E-48 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 Pfam PF01612 3'-5' exonuclease 332 516 2.5E-38 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 657 679 2.1E-78 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 702 725 2.1E-78 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 756 781 2.1E-78 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 815 826 2.1E-78 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 793 804 2.1E-78 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 680 695 2.1E-78 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 878 891 2.1E-78 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 732 745 2.1E-78 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 847 863 2.1E-78 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 Pfam PF00476 DNA polymerase family A 553 928 3.7E-157 T 28-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:3.30.70.370 756 931 1.4E-50 T 28-03-2018 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:3.30.70.370 659 754 3.9E-18 T 28-03-2018 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 ProSitePatterns PS00447 DNA polymerase family A signature. 756 775 - T 28-03-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 6.5E-55 T 28-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 SMART SM00482 688 895 5.6E-119 T 28-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 SUPERFAMILY SSF56672 526 931 5.56E-159 T 28-03-2018 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:1.10.150.20 181 250 1.4E-23 T 28-03-2018 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:1.20.1060.10 545 658 1.0E-33 T 28-03-2018 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 SMART SM00474 332 519 9.8E-41 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 SUPERFAMILY SSF47807 171 291 2.54E-29 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 5.6E-28 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 SUPERFAMILY SSF53098 335 520 5.24E-54 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:3.40.50.1010 7 180 9.2E-69 T 28-03-2018 IPR029060 PIN domain-like AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 SMART SM00475 7 267 9.8E-123 T 28-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 SMART SM00279 173 208 1.2E-13 T 28-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AL549_RS22360 80f34bf5ad1ff879346e8bc5a5073679 931 TIGRFAM TIGR00593 pola: DNA polymerase I 9 931 1.4E-288 T 28-03-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS05005 991534e75b781d268622cb13c1574676 532 Gene3D G3DSA:3.20.20.450 267 530 8.0E-87 T 28-03-2018 IPR001633 EAL domain AL549_RS05005 991534e75b781d268622cb13c1574676 532 Pfam PF00563 EAL domain 275 513 1.8E-64 T 28-03-2018 IPR001633 EAL domain AL549_RS05005 991534e75b781d268622cb13c1574676 532 SMART SM00052 269 518 2.2E-85 T 28-03-2018 IPR001633 EAL domain AL549_RS05005 991534e75b781d268622cb13c1574676 532 SUPERFAMILY SSF55073 102 261 3.22E-43 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS05005 991534e75b781d268622cb13c1574676 532 Gene3D G3DSA:3.30.70.270 91 266 2.6E-52 T 28-03-2018 AL549_RS05005 991534e75b781d268622cb13c1574676 532 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 93 258 3.1E-46 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05005 991534e75b781d268622cb13c1574676 532 SUPERFAMILY SSF141868 274 524 2.75E-79 T 28-03-2018 IPR001633 EAL domain AL549_RS05005 991534e75b781d268622cb13c1574676 532 SMART SM00267 86 258 2.2E-44 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05005 991534e75b781d268622cb13c1574676 532 Pfam PF00990 Diguanylate cyclase, GGDEF domain 99 252 1.4E-42 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 Gene3D G3DSA:3.90.480.10 497 630 2.3E-8 T 28-03-2018 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 561 623 2.9E-11 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 634 773 3.2E-13 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 Gene3D G3DSA:3.40.50.720 128 309 3.6E-32 T 28-03-2018 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 SUPERFAMILY SSF55124 503 629 3.11E-31 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 Gene3D G3DSA:3.30.413.10 632 808 1.0E-33 T 28-03-2018 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 SUPERFAMILY SSF56014 634 809 1.57E-45 T 28-03-2018 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 PIRSF PIRSF037149 1 836 0.0 T 28-03-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 28-03-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 7.2E-11 T 28-03-2018 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 7.2E-11 T 28-03-2018 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 7.2E-11 T 28-03-2018 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 7.2E-11 T 28-03-2018 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 7.3E-6 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 7.3E-6 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 Gene3D G3DSA:3.50.50.60 1 127 1.7E-10 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 6.9E-15 T 28-03-2018 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 6.9E-15 T 28-03-2018 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.9E-15 T 28-03-2018 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 6.9E-15 T 28-03-2018 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 6.9E-15 T 28-03-2018 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 SUPERFAMILY SSF51905 144 311 2.42E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 472 3.1E-14 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 1.5E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05410 73a075c52d85f326b6b9e07d74f16387 853 SUPERFAMILY SSF51905 3 187 9.55E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS09650 40115cd3b3a3faf15dc75e2088c54909 418 SMART SM00388 220 286 8.5E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS09650 40115cd3b3a3faf15dc75e2088c54909 418 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 284 2.1E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS09650 40115cd3b3a3faf15dc75e2088c54909 418 SUPERFAMILY SSF47384 205 284 3.92E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS09650 40115cd3b3a3faf15dc75e2088c54909 418 SUPERFAMILY SSF55874 286 407 9.49E-12 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS09650 40115cd3b3a3faf15dc75e2088c54909 418 Gene3D G3DSA:3.30.565.10 287 418 2.8E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS09650 40115cd3b3a3faf15dc75e2088c54909 418 Gene3D G3DSA:1.10.287.130 211 282 1.9E-8 T 28-03-2018 AL549_RS23505 dfe70747ec4dca2a4c410b589cb0fb46 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 407 1.6E-122 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL549_RS23505 dfe70747ec4dca2a4c410b589cb0fb46 421 SUPERFAMILY SSF55205 6 418 2.78E-142 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AL549_RS23505 dfe70747ec4dca2a4c410b589cb0fb46 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 2.9E-182 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS23505 dfe70747ec4dca2a4c410b589cb0fb46 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 43.595 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS23505 dfe70747ec4dca2a4c410b589cb0fb46 421 Gene3D G3DSA:3.65.10.10 22 220 1.1E-51 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL549_RS23505 dfe70747ec4dca2a4c410b589cb0fb46 421 Gene3D G3DSA:3.65.10.10 221 419 7.3E-45 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL549_RS01575 1d16f43c14f9f343c6627266c62cf9c1 146 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 5.2E-17 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL549_RS01575 1d16f43c14f9f343c6627266c62cf9c1 146 SMART SM00344 1 110 2.6E-39 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL549_RS01575 1d16f43c14f9f343c6627266c62cf9c1 146 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 2.0E-18 T 28-03-2018 AL549_RS01575 1d16f43c14f9f343c6627266c62cf9c1 146 Gene3D G3DSA:1.10.10.10 1 52 4.5E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01575 1d16f43c14f9f343c6627266c62cf9c1 146 Gene3D G3DSA:3.30.70.920 53 146 2.4E-21 T 28-03-2018 AL549_RS01575 1d16f43c14f9f343c6627266c62cf9c1 146 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL549_RS01575 1d16f43c14f9f343c6627266c62cf9c1 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.0E-17 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS01575 1d16f43c14f9f343c6627266c62cf9c1 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.0E-17 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS01575 1d16f43c14f9f343c6627266c62cf9c1 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.0E-17 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS01575 1d16f43c14f9f343c6627266c62cf9c1 146 SUPERFAMILY SSF54909 63 145 8.18E-17 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL549_RS01575 1d16f43c14f9f343c6627266c62cf9c1 146 SUPERFAMILY SSF46785 1 60 5.41E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS17855 c52a8c2edcdaaebc4ad0736d887c439f 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 5.7E-58 T 28-03-2018 IPR020911 Uncharacterised protein family UPF0325 AL549_RS17855 c52a8c2edcdaaebc4ad0736d887c439f 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 5.0E-68 T 28-03-2018 IPR020911 Uncharacterised protein family UPF0325 AL549_RS17855 c52a8c2edcdaaebc4ad0736d887c439f 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 32.09 T 28-03-2018 IPR020911 Uncharacterised protein family UPF0325 AL549_RS13350 34e26ef28ae512f61fdd22cec3983f4a 215 Gene3D G3DSA:3.40.30.10 2 89 3.5E-19 T 28-03-2018 AL549_RS13350 34e26ef28ae512f61fdd22cec3983f4a 215 SUPERFAMILY SSF52833 2 83 2.24E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS13350 34e26ef28ae512f61fdd22cec3983f4a 215 SUPERFAMILY SSF47616 80 206 1.06E-19 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL549_RS13350 34e26ef28ae512f61fdd22cec3983f4a 215 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 72 3.7E-14 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL549_RS13350 34e26ef28ae512f61fdd22cec3983f4a 215 Gene3D G3DSA:1.20.1050.10 90 215 7.7E-17 T 28-03-2018 AL549_RS13350 34e26ef28ae512f61fdd22cec3983f4a 215 Pfam PF00043 Glutathione S-transferase, C-terminal domain 127 192 4.5E-8 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL549_RS11010 d654efc6e1a009988b3c6d97e740eee8 385 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 378 1.1E-130 T 28-03-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AL549_RS11010 d654efc6e1a009988b3c6d97e740eee8 385 Gene3D G3DSA:3.40.640.10 84 280 4.0E-45 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS11010 d654efc6e1a009988b3c6d97e740eee8 385 Gene3D G3DSA:3.90.1150.10 281 385 2.3E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS11010 d654efc6e1a009988b3c6d97e740eee8 385 Pfam PF00155 Aminotransferase class I and II 43 377 8.0E-50 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL549_RS11010 d654efc6e1a009988b3c6d97e740eee8 385 SUPERFAMILY SSF53383 6 378 4.87E-98 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS11010 d654efc6e1a009988b3c6d97e740eee8 385 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 5 382 43.693 T 28-03-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AL549_RS05105 036c074e9374ccee20cbffb958ff5dc8 157 SUPERFAMILY SSF160719 33 142 6.28E-9 T 28-03-2018 AL549_RS05105 036c074e9374ccee20cbffb958ff5dc8 157 Gene3D G3DSA:3.10.450.40 9 148 7.7E-18 T 28-03-2018 AL549_RS05105 036c074e9374ccee20cbffb958ff5dc8 157 Pfam PF04965 Gene 25-like lysozyme 33 133 1.8E-16 T 28-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AL549_RS05105 036c074e9374ccee20cbffb958ff5dc8 157 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 8 147 1.9E-34 T 28-03-2018 IPR017737 Type VI secretion system, lysozyme-related protein AL549_RS18885 1016ffdb10942f964eed9336087a4736 886 PIRSF PIRSF000156 1 886 0.0 T 28-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AL549_RS18885 1016ffdb10942f964eed9336087a4736 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 298 2.8E-10 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL549_RS18885 1016ffdb10942f964eed9336087a4736 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 360 426 1.9E-4 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL549_RS18885 1016ffdb10942f964eed9336087a4736 886 SUPERFAMILY SSF52518 475 700 1.65E-97 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS18885 1016ffdb10942f964eed9336087a4736 886 Gene3D G3DSA:3.40.50.920 706 886 1.8E-37 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL549_RS18885 1016ffdb10942f964eed9336087a4736 886 Gene3D G3DSA:3.40.50.970 472 705 9.0E-68 T 28-03-2018 AL549_RS18885 1016ffdb10942f964eed9336087a4736 886 SUPERFAMILY SSF52518 56 469 6.11E-140 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS18885 1016ffdb10942f964eed9336087a4736 886 SUPERFAMILY SSF52922 701 885 1.04E-57 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL549_RS18885 1016ffdb10942f964eed9336087a4736 886 Gene3D G3DSA:3.40.50.970 55 471 5.7E-84 T 28-03-2018 AL549_RS18885 1016ffdb10942f964eed9336087a4736 886 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 885 0.0 T 28-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AL549_RS17800 f9846c069a5ec572f2e3a297ca83b0b7 804 Pfam PF07244 Surface antigen variable number repeat 266 344 2.2E-11 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL549_RS17800 f9846c069a5ec572f2e3a297ca83b0b7 804 Pfam PF07244 Surface antigen variable number repeat 176 263 2.5E-15 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL549_RS17800 f9846c069a5ec572f2e3a297ca83b0b7 804 Pfam PF07244 Surface antigen variable number repeat 92 172 3.5E-12 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL549_RS17800 f9846c069a5ec572f2e3a297ca83b0b7 804 Pfam PF07244 Surface antigen variable number repeat 347 420 5.4E-16 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL549_RS17800 f9846c069a5ec572f2e3a297ca83b0b7 804 Gene3D G3DSA:2.40.160.50 387 804 5.9E-80 T 28-03-2018 AL549_RS17800 f9846c069a5ec572f2e3a297ca83b0b7 804 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 804 4.7E-279 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AL549_RS17800 f9846c069a5ec572f2e3a297ca83b0b7 804 Gene3D G3DSA:3.10.20.310 92 173 1.9E-14 T 28-03-2018 AL549_RS17800 f9846c069a5ec572f2e3a297ca83b0b7 804 Gene3D G3DSA:3.10.20.310 266 346 5.5E-10 T 28-03-2018 AL549_RS17800 f9846c069a5ec572f2e3a297ca83b0b7 804 Gene3D G3DSA:3.10.20.310 350 386 0.008 T 28-03-2018 AL549_RS17800 f9846c069a5ec572f2e3a297ca83b0b7 804 Gene3D G3DSA:3.10.20.310 19 91 5.6E-8 T 28-03-2018 AL549_RS17800 f9846c069a5ec572f2e3a297ca83b0b7 804 Pfam PF01103 Surface antigen 448 804 2.2E-89 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AL549_RS17800 f9846c069a5ec572f2e3a297ca83b0b7 804 PIRSF PIRSF006076 1 804 1.9E-245 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AL549_RS17800 f9846c069a5ec572f2e3a297ca83b0b7 804 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 804 25.771 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AL549_RS17800 f9846c069a5ec572f2e3a297ca83b0b7 804 Gene3D G3DSA:3.10.20.310 174 264 6.8E-20 T 28-03-2018 AL549_RS23345 6a62ab44f30814f46c5c83289454222e 209 Gene3D G3DSA:3.30.1060.10 25 202 1.9E-78 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL549_RS23345 6a62ab44f30814f46c5c83289454222e 209 SUPERFAMILY SSF55068 3 207 2.75E-79 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL549_RS23345 6a62ab44f30814f46c5c83289454222e 209 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 37.458 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL549_RS23345 6a62ab44f30814f46c5c83289454222e 209 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 1.7E-67 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL549_RS23345 6a62ab44f30814f46c5c83289454222e 209 Pfam PF01625 Peptide methionine sulfoxide reductase 45 197 1.4E-65 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 229 242 - T 28-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 4.2E-167 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 2.5E-29 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 2.5E-29 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 2.5E-29 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 2.5E-29 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 Gene3D G3DSA:2.40.37.10 269 417 2.3E-40 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 SUPERFAMILY SSF51419 27 284 7.07E-82 T 28-03-2018 IPR029066 PLP-binding barrel AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 6.8E-73 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 5.0E-25 T 28-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 SUPERFAMILY SSF50621 261 414 1.05E-51 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 Gene3D G3DSA:3.20.20.10 35 268 9.8E-64 T 28-03-2018 IPR029066 PLP-binding barrel AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 40.891 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 28-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 6.9E-27 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 6.9E-27 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 6.9E-27 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 6.9E-27 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL549_RS21325 8988b19f4f52871ba040ad74cb42552d 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 6.9E-27 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL549_RS08715 1cd64cb1a3908a3b2b9a419fc41f2c4a 259 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 46.302 T 28-03-2018 IPR022895 Flap endonuclease Xni GO:0048256 AL549_RS08715 1cd64cb1a3908a3b2b9a419fc41f2c4a 259 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 159 2.1E-31 T 28-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AL549_RS08715 1cd64cb1a3908a3b2b9a419fc41f2c4a 259 SUPERFAMILY SSF88723 4 164 2.11E-38 T 28-03-2018 IPR029060 PIN domain-like AL549_RS08715 1cd64cb1a3908a3b2b9a419fc41f2c4a 259 Gene3D G3DSA:1.10.150.20 178 255 3.2E-16 T 28-03-2018 AL549_RS08715 1cd64cb1a3908a3b2b9a419fc41f2c4a 259 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 255 1.3E-18 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AL549_RS08715 1cd64cb1a3908a3b2b9a419fc41f2c4a 259 SMART SM00475 3 254 9.9E-64 T 28-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AL549_RS08715 1cd64cb1a3908a3b2b9a419fc41f2c4a 259 Gene3D G3DSA:3.40.50.1010 3 177 3.6E-44 T 28-03-2018 IPR029060 PIN domain-like AL549_RS08715 1cd64cb1a3908a3b2b9a419fc41f2c4a 259 SMART SM00279 167 202 5.6E-8 T 28-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AL549_RS08715 1cd64cb1a3908a3b2b9a419fc41f2c4a 259 SUPERFAMILY SSF47807 164 254 4.49E-17 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AL549_RS22780 6686b7fa141424bfcb148430160c590d 353 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 74 303 3.4E-60 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AL549_RS22780 6686b7fa141424bfcb148430160c590d 353 Gene3D G3DSA:3.40.50.2000 161 348 1.3E-41 T 28-03-2018 AL549_RS22780 6686b7fa141424bfcb148430160c590d 353 Gene3D G3DSA:3.40.50.2000 4 160 7.6E-33 T 28-03-2018 AL549_RS22780 6686b7fa141424bfcb148430160c590d 353 SUPERFAMILY SSF53756 10 342 6.12E-85 T 28-03-2018 AL549_RS21775 5e32666004c3aff28687637feb65fd9f 144 SUPERFAMILY SSF52218 2 143 2.39E-38 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS21775 5e32666004c3aff28687637feb65fd9f 144 Gene3D G3DSA:3.40.50.360 1 144 3.9E-25 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS21775 5e32666004c3aff28687637feb65fd9f 144 Pfam PF00258 Flavodoxin 4 136 3.5E-21 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL549_RS21145 9a4c3f5a6856ceadeb19efe892cb3662 809 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 28-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AL549_RS21145 9a4c3f5a6856ceadeb19efe892cb3662 809 Pfam PF01553 Acyltransferase 289 424 9.2E-24 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS21145 9a4c3f5a6856ceadeb19efe892cb3662 809 PIRSF PIRSF500064 3 809 0.0 T 28-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AL549_RS21145 9a4c3f5a6856ceadeb19efe892cb3662 809 PIRSF PIRSF000437 19 809 0.0 T 28-03-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 AL549_RS21145 9a4c3f5a6856ceadeb19efe892cb3662 809 SMART SM00563 300 427 3.2E-27 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS21145 9a4c3f5a6856ceadeb19efe892cb3662 809 SUPERFAMILY SSF69593 281 488 4.71E-25 T 28-03-2018 AL549_RS21145 9a4c3f5a6856ceadeb19efe892cb3662 809 Gene3D G3DSA:3.40.1130.10 233 531 2.1E-36 T 28-03-2018 AL549_RS21145 9a4c3f5a6856ceadeb19efe892cb3662 809 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.619 T 28-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AL549_RS10435 b14c6f270ff9db10c096db1db93294e5 521 PIRSF PIRSF001373 3 521 1.2E-259 T 28-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL549_RS10435 b14c6f270ff9db10c096db1db93294e5 521 SUPERFAMILY SSF56322 14 516 1.44E-156 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AL549_RS10435 b14c6f270ff9db10c096db1db93294e5 521 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 518 6.8E-227 T 28-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL549_RS10435 b14c6f270ff9db10c096db1db93294e5 521 Pfam PF04715 Anthranilate synthase component I, N terminal region 25 198 1.5E-12 T 28-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL549_RS10435 b14c6f270ff9db10c096db1db93294e5 521 Pfam PF00425 chorismate binding enzyme 246 506 9.8E-84 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AL549_RS10435 b14c6f270ff9db10c096db1db93294e5 521 Gene3D G3DSA:3.60.120.10 6 521 2.9E-159 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AL549_RS10435 b14c6f270ff9db10c096db1db93294e5 521 PRINTS PR00095 Anthranilate synthase component I signature 448 462 6.1E-23 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL549_RS10435 b14c6f270ff9db10c096db1db93294e5 521 PRINTS PR00095 Anthranilate synthase component I signature 368 381 6.1E-23 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL549_RS10435 b14c6f270ff9db10c096db1db93294e5 521 PRINTS PR00095 Anthranilate synthase component I signature 354 367 6.1E-23 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL549_RS10435 b14c6f270ff9db10c096db1db93294e5 521 PRINTS PR00095 Anthranilate synthase component I signature 463 477 6.1E-23 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL549_RS18095 3852254fab6fb2f73582dee691011d34 142 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 141 3.3E-48 T 28-03-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE AL549_RS18095 3852254fab6fb2f73582dee691011d34 142 Pfam PF02657 Fe-S metabolism associated domain 21 139 2.8E-47 T 28-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AL549_RS18095 3852254fab6fb2f73582dee691011d34 142 SUPERFAMILY SSF82649 4 141 1.99E-50 T 28-03-2018 AL549_RS18095 3852254fab6fb2f73582dee691011d34 142 Gene3D G3DSA:3.90.1010.10 2 142 5.1E-50 T 28-03-2018 AL549_RS19075 0e3ef372192a5bff1fdce24aecf14f1e 153 Pfam PF02631 RecX family 36 150 9.9E-29 T 28-03-2018 IPR003783 Regulatory protein RecX GO:0006282 AL549_RS19075 0e3ef372192a5bff1fdce24aecf14f1e 153 Gene3D G3DSA:1.10.10.10 104 153 6.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS19075 0e3ef372192a5bff1fdce24aecf14f1e 153 Gene3D G3DSA:1.10.10.10 58 101 2.5E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS19075 0e3ef372192a5bff1fdce24aecf14f1e 153 Gene3D G3DSA:1.10.10.10 10 57 5.0E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS19075 0e3ef372192a5bff1fdce24aecf14f1e 153 Hamap MF_01114 Regulatory protein RecX [recX]. 11 152 13.262 T 28-03-2018 IPR003783 Regulatory protein RecX GO:0006282 AL549_RS04455 c61937dfef5cc3091a217db1f3016592 276 SUPERFAMILY SSF51215 31 156 1.7E-17 T 28-03-2018 AL549_RS04455 c61937dfef5cc3091a217db1f3016592 276 Pfam PF02311 AraC-like ligand binding domain 18 150 1.1E-25 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL549_RS04455 c61937dfef5cc3091a217db1f3016592 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 1.4E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS04455 c61937dfef5cc3091a217db1f3016592 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 1.4E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS04455 c61937dfef5cc3091a217db1f3016592 276 SUPERFAMILY SSF46689 174 224 1.79E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS04455 c61937dfef5cc3091a217db1f3016592 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 268 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL549_RS04455 c61937dfef5cc3091a217db1f3016592 276 Pfam PF12833 Helix-turn-helix domain 196 273 1.1E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS04455 c61937dfef5cc3091a217db1f3016592 276 Gene3D G3DSA:2.60.120.10 27 234 2.0E-12 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS04455 c61937dfef5cc3091a217db1f3016592 276 SUPERFAMILY SSF46689 227 274 2.15E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS04455 c61937dfef5cc3091a217db1f3016592 276 Gene3D G3DSA:1.10.10.60 235 276 7.0E-17 T 28-03-2018 AL549_RS04455 c61937dfef5cc3091a217db1f3016592 276 SMART SM00342 190 272 9.6E-30 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS01925 45a9a7bcdd9df2508b827bde7b5f39e2 351 Pfam PF08719 Domain of unknown function (DUF1768) 6 145 2.6E-36 T 28-03-2018 IPR012816 NADAR AL549_RS01925 45a9a7bcdd9df2508b827bde7b5f39e2 351 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 5 144 2.3E-34 T 28-03-2018 IPR012816 NADAR AL549_RS01925 45a9a7bcdd9df2508b827bde7b5f39e2 351 SUPERFAMILY SSF143990 3 146 2.48E-51 T 28-03-2018 AL549_RS01925 45a9a7bcdd9df2508b827bde7b5f39e2 351 PIRSF PIRSF001259 133 351 2.9E-93 T 28-03-2018 AL549_RS01925 45a9a7bcdd9df2508b827bde7b5f39e2 351 PIRSF PIRSF001259 6 148 0.0039 T 28-03-2018 AL549_RS01925 45a9a7bcdd9df2508b827bde7b5f39e2 351 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 151 346 44.3 T 28-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL549_RS01925 45a9a7bcdd9df2508b827bde7b5f39e2 351 Pfam PF00925 GTP cyclohydrolase II 158 320 5.9E-66 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL549_RS01925 45a9a7bcdd9df2508b827bde7b5f39e2 351 SUPERFAMILY SSF142695 152 322 9.55E-64 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL549_RS01925 45a9a7bcdd9df2508b827bde7b5f39e2 351 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 157 343 4.6E-81 T 28-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL549_RS20705 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 SUPERFAMILY SSF48592 373 525 2.44E-31 T 28-03-2018 AL549_RS20705 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 41.501 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL549_RS20705 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Gene3D G3DSA:1.10.560.10 1 185 8.3E-45 T 28-03-2018 IPR027413 GroEL-like equatorial domain AL549_RS20705 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 2.8E-254 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL549_RS20705 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 SUPERFAMILY SSF52029 185 376 4.49E-84 T 28-03-2018 IPR027409 GroEL-like apical domain AL549_RS20705 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 SUPERFAMILY SSF48592 3 230 1.02E-67 T 28-03-2018 AL549_RS20705 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Gene3D G3DSA:1.10.560.10 374 516 6.8E-25 T 28-03-2018 IPR027413 GroEL-like equatorial domain AL549_RS20705 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Gene3D G3DSA:3.50.7.10 186 373 3.2E-98 T 28-03-2018 IPR027409 GroEL-like apical domain AL549_RS20705 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 350 375 1.6E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL549_RS20705 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 83 110 1.6E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL549_RS20705 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 27 53 1.6E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL549_RS20705 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 398 419 1.6E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL549_RS20705 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 268 291 1.6E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL549_RS20705 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 5.4E-96 T 28-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AL549_RS20705 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 28-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL549_RS03325 5a2a02a82cd7d215213a30aa5ffb51a7 352 Gene3D G3DSA:2.60.40.1610 64 188 6.4E-14 T 28-03-2018 IPR010679 Domain of unknown function DUF1254 AL549_RS03325 5a2a02a82cd7d215213a30aa5ffb51a7 352 Pfam PF06863 Protein of unknown function (DUF1254) 65 174 1.6E-11 T 28-03-2018 IPR010679 Domain of unknown function DUF1254 AL549_RS03325 5a2a02a82cd7d215213a30aa5ffb51a7 352 SUPERFAMILY SSF160935 11 350 3.4E-54 T 28-03-2018 AL549_RS03325 5a2a02a82cd7d215213a30aa5ffb51a7 352 Gene3D G3DSA:2.60.120.600 194 352 2.1E-23 T 28-03-2018 IPR010621 Domain of unknown function DUF1214 AL549_RS03325 5a2a02a82cd7d215213a30aa5ffb51a7 352 Pfam PF06742 Protein of unknown function (DUF1214) 251 334 1.5E-11 T 28-03-2018 IPR010621 Domain of unknown function DUF1214 AL549_RS07545 5076906d9cfd202d51dbec7e70d42b26 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 2.1E-116 T 28-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL549_RS07545 5076906d9cfd202d51dbec7e70d42b26 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 1.9E-46 T 28-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL549_RS07545 5076906d9cfd202d51dbec7e70d42b26 355 SUPERFAMILY SSF53756 5 352 1.5E-123 T 28-03-2018 AL549_RS07545 5076906d9cfd202d51dbec7e70d42b26 355 Gene3D G3DSA:3.40.50.2000 174 346 2.2E-32 T 28-03-2018 AL549_RS07545 5076906d9cfd202d51dbec7e70d42b26 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.392 T 28-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL549_RS07545 5076906d9cfd202d51dbec7e70d42b26 355 Gene3D G3DSA:3.40.50.2000 1 173 9.4E-46 T 28-03-2018 AL549_RS07545 5076906d9cfd202d51dbec7e70d42b26 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 334 1.9E-32 T 28-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 AL549_RS02645 18195ed4fc1cdb48d289b14d116f3663 391 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 16 379 7.7E-187 T 28-03-2018 IPR014180 Sugar isomerase, AgaS GO:0016861 AL549_RS02645 18195ed4fc1cdb48d289b14d116f3663 391 Gene3D G3DSA:3.40.50.10490 212 371 2.6E-15 T 28-03-2018 AL549_RS02645 18195ed4fc1cdb48d289b14d116f3663 391 Gene3D G3DSA:3.40.50.10490 3 199 2.2E-23 T 28-03-2018 AL549_RS02645 18195ed4fc1cdb48d289b14d116f3663 391 Pfam PF01380 SIS domain 53 191 5.5E-13 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL549_RS02645 18195ed4fc1cdb48d289b14d116f3663 391 SUPERFAMILY SSF53697 20 370 1.62E-48 T 28-03-2018 AL549_RS16100 1762801da83607a236522d8eba093ab2 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 9.9E-38 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL549_RS16100 1762801da83607a236522d8eba093ab2 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 9.9E-38 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL549_RS16100 1762801da83607a236522d8eba093ab2 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 9.9E-38 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL549_RS16100 1762801da83607a236522d8eba093ab2 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 9.9E-38 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL549_RS16100 1762801da83607a236522d8eba093ab2 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AL549_RS16100 1762801da83607a236522d8eba093ab2 396 Pfam PF00155 Aminotransferase class I and II 27 392 2.9E-83 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL549_RS16100 1762801da83607a236522d8eba093ab2 396 Gene3D G3DSA:3.90.1150.10 241 396 7.9E-51 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS16100 1762801da83607a236522d8eba093ab2 396 Gene3D G3DSA:3.90.1150.10 1 155 1.8E-27 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS16100 1762801da83607a236522d8eba093ab2 396 SUPERFAMILY SSF53383 1 395 6.12E-114 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS15495 6a6d0620c686b1e1cc74aa584c531dc7 795 Pfam PF03176 MMPL family 64 388 4.1E-20 T 28-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AL549_RS15495 6a6d0620c686b1e1cc74aa584c531dc7 795 Pfam PF03176 MMPL family 595 769 9.1E-14 T 28-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AL549_RS15495 6a6d0620c686b1e1cc74aa584c531dc7 795 Gene3D G3DSA:1.20.1640.10 568 784 9.2E-32 T 28-03-2018 AL549_RS15495 6a6d0620c686b1e1cc74aa584c531dc7 795 Gene3D G3DSA:1.20.1640.10 181 398 3.4E-33 T 28-03-2018 AL549_RS15495 6a6d0620c686b1e1cc74aa584c531dc7 795 SUPERFAMILY SSF82866 581 772 2.49E-32 T 28-03-2018 AL549_RS15495 6a6d0620c686b1e1cc74aa584c531dc7 795 SUPERFAMILY SSF82866 170 386 5.89E-32 T 28-03-2018 AL549_RS21830 2f1da5cb47d2bb0b69897fb1bd444af8 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.3E-72 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL549_RS21830 2f1da5cb47d2bb0b69897fb1bd444af8 513 SUPERFAMILY SSF52540 96 381 1.16E-94 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS21830 2f1da5cb47d2bb0b69897fb1bd444af8 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL549_RS21830 2f1da5cb47d2bb0b69897fb1bd444af8 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 1.7E-250 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21830 2f1da5cb47d2bb0b69897fb1bd444af8 513 Gene3D G3DSA:3.40.50.300 83 375 1.3E-112 T 28-03-2018 AL549_RS21830 2f1da5cb47d2bb0b69897fb1bd444af8 513 Gene3D G3DSA:2.40.30.20 3 82 1.7E-28 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21830 2f1da5cb47d2bb0b69897fb1bd444af8 513 SUPERFAMILY SSF47917 383 511 6.02E-45 T 28-03-2018 AL549_RS21830 2f1da5cb47d2bb0b69897fb1bd444af8 513 Gene3D G3DSA:1.20.150.20 384 510 3.5E-44 T 28-03-2018 AL549_RS21830 2f1da5cb47d2bb0b69897fb1bd444af8 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.1E-43 T 28-03-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21830 2f1da5cb47d2bb0b69897fb1bd444af8 513 SUPERFAMILY SSF50615 10 94 3.73E-26 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL549_RS21830 2f1da5cb47d2bb0b69897fb1bd444af8 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 5.5E-14 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL549_RS21830 2f1da5cb47d2bb0b69897fb1bd444af8 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.539 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS02020 f06d0986f07b66af5cb8545019cd8d28 99 Pfam PF01740 STAS domain 6 96 2.7E-10 T 28-03-2018 IPR002645 STAS domain AL549_RS02020 f06d0986f07b66af5cb8545019cd8d28 99 Gene3D G3DSA:3.30.750.24 1 98 6.6E-16 T 28-03-2018 IPR002645 STAS domain AL549_RS02020 f06d0986f07b66af5cb8545019cd8d28 99 SUPERFAMILY SSF52091 7 98 1.28E-21 T 28-03-2018 IPR002645 STAS domain AL549_RS10595 cdd4eb7395f4f51e96028180010f78e2 474 Pfam PF02335 Cytochrome c552 40 469 4.1E-179 T 28-03-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AL549_RS10595 cdd4eb7395f4f51e96028180010f78e2 474 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 35 472 9.1E-248 T 28-03-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AL549_RS10595 cdd4eb7395f4f51e96028180010f78e2 474 PIRSF PIRSF000243 2 474 6.0E-128 T 28-03-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AL549_RS10595 cdd4eb7395f4f51e96028180010f78e2 474 Gene3D G3DSA:1.10.1130.10 38 340 1.5E-78 T 28-03-2018 AL549_RS10595 cdd4eb7395f4f51e96028180010f78e2 474 SUPERFAMILY SSF48695 36 469 1.12E-161 T 28-03-2018 IPR011031 Multihaem cytochrome AL549_RS10595 cdd4eb7395f4f51e96028180010f78e2 474 Hamap MF_01182 Cytochrome c-552 [nrfA]. 3 474 59.232 T 28-03-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AL549_RS09865 7eaaeb3474cfb8e7b0c7fc3099d7995e 619 Gene3D G3DSA:3.10.50.40 394 498 0.012 T 28-03-2018 AL549_RS09865 7eaaeb3474cfb8e7b0c7fc3099d7995e 619 Gene3D G3DSA:3.10.50.40 233 262 0.39 T 28-03-2018 AL549_RS09865 7eaaeb3474cfb8e7b0c7fc3099d7995e 619 Gene3D G3DSA:3.10.50.40 263 387 1.6E-41 T 28-03-2018 AL549_RS09865 7eaaeb3474cfb8e7b0c7fc3099d7995e 619 Gene3D G3DSA:1.10.4030.10 36 171 1.8E-23 T 28-03-2018 AL549_RS09865 7eaaeb3474cfb8e7b0c7fc3099d7995e 619 Gene3D G3DSA:1.10.4030.10 203 232 0.16 T 28-03-2018 AL549_RS09865 7eaaeb3474cfb8e7b0c7fc3099d7995e 619 SUPERFAMILY SSF109998 203 242 3.73E-39 T 28-03-2018 IPR027304 Trigger factor/SurA domain AL549_RS09865 7eaaeb3474cfb8e7b0c7fc3099d7995e 619 SUPERFAMILY SSF109998 39 169 3.73E-39 T 28-03-2018 IPR027304 Trigger factor/SurA domain AL549_RS09865 7eaaeb3474cfb8e7b0c7fc3099d7995e 619 SUPERFAMILY SSF54534 224 361 1.9E-30 T 28-03-2018 AL549_RS09865 7eaaeb3474cfb8e7b0c7fc3099d7995e 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AL549_RS09865 7eaaeb3474cfb8e7b0c7fc3099d7995e 619 Pfam PF13616 PPIC-type PPIASE domain 262 361 3.4E-25 T 28-03-2018 AL549_RS09865 7eaaeb3474cfb8e7b0c7fc3099d7995e 619 Pfam PF13624 SurA N-terminal domain 1 166 2.5E-50 T 28-03-2018 AL549_RS17340 e88e2b0991173370460473f0e14bc4e3 247 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 5.1E-85 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17340 e88e2b0991173370460473f0e14bc4e3 247 Pfam PF01578 Cytochrome C assembly protein 16 184 1.1E-31 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL549_RS17340 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 2.6E-65 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17340 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 2.6E-65 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17340 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 2.6E-65 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17340 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 2.6E-65 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17340 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 2.6E-65 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17340 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 2.6E-65 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS04820 64a7ff453d820809bb309e9c86d38aa9 405 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 400 4.1E-124 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL549_RS04820 64a7ff453d820809bb309e9c86d38aa9 405 SUPERFAMILY SSF53901 5 268 2.39E-75 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS04820 64a7ff453d820809bb309e9c86d38aa9 405 ProSitePatterns PS00099 Thiolases active site. 384 397 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AL549_RS04820 64a7ff453d820809bb309e9c86d38aa9 405 PIRSF PIRSF000429 1 403 2.6E-108 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL549_RS04820 64a7ff453d820809bb309e9c86d38aa9 405 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AL549_RS04820 64a7ff453d820809bb309e9c86d38aa9 405 Gene3D G3DSA:3.40.47.10 1 267 6.2E-54 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS04820 64a7ff453d820809bb309e9c86d38aa9 405 Pfam PF00108 Thiolase, N-terminal domain 6 259 2.2E-84 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL549_RS04820 64a7ff453d820809bb309e9c86d38aa9 405 SUPERFAMILY SSF53901 269 401 1.26E-32 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS04820 64a7ff453d820809bb309e9c86d38aa9 405 Pfam PF02803 Thiolase, C-terminal domain 269 401 2.1E-34 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL549_RS04820 64a7ff453d820809bb309e9c86d38aa9 405 Gene3D G3DSA:3.40.47.10 268 400 7.6E-27 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS15870 2eb5f09127002aa6b25a3b0c2096e5d3 157 Pfam PF00210 Ferritin-like domain 19 157 4.4E-25 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AL549_RS15870 2eb5f09127002aa6b25a3b0c2096e5d3 157 Gene3D G3DSA:1.20.1260.10 4 157 3.7E-41 T 28-03-2018 IPR012347 Ferritin-related AL549_RS15870 2eb5f09127002aa6b25a3b0c2096e5d3 157 ProSitePatterns PS00819 Dps protein family signature 2. 65 79 - T 28-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AL549_RS15870 2eb5f09127002aa6b25a3b0c2096e5d3 157 ProSitePatterns PS00818 Dps protein family signature 1. 39 55 - T 28-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AL549_RS15870 2eb5f09127002aa6b25a3b0c2096e5d3 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 39 55 3.8E-13 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AL549_RS15870 2eb5f09127002aa6b25a3b0c2096e5d3 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 134 152 3.8E-13 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AL549_RS15870 2eb5f09127002aa6b25a3b0c2096e5d3 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 63 79 3.8E-13 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AL549_RS15870 2eb5f09127002aa6b25a3b0c2096e5d3 157 SUPERFAMILY SSF47240 4 157 4.06E-43 T 28-03-2018 IPR009078 Ferritin-like superfamily AL549_RS15870 2eb5f09127002aa6b25a3b0c2096e5d3 157 PIRSF PIRSF005900 1 157 1.6E-44 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AL549_RS03650 939b0fdba145b3b1605ee76937e7d88a 680 Gene3D G3DSA:3.40.190.10 29 655 2.5E-6 T 28-03-2018 AL549_RS03650 939b0fdba145b3b1605ee76937e7d88a 680 SUPERFAMILY SSF101898 470 519 2.09E-6 T 28-03-2018 AL549_RS03650 939b0fdba145b3b1605ee76937e7d88a 680 SUPERFAMILY SSF101898 331 422 2.09E-6 T 28-03-2018 AL549_RS03650 939b0fdba145b3b1605ee76937e7d88a 680 SUPERFAMILY SSF101898 552 637 2.09E-6 T 28-03-2018 AL549_RS03650 939b0fdba145b3b1605ee76937e7d88a 680 Pfam PF05787 Bacterial protein of unknown function (DUF839) 76 643 2.7E-151 T 28-03-2018 IPR008557 Protein of unknown function DUF839 AL549_RS15950 2cccb68d2b4240acf8e13b8ec614cafe 571 Pfam PF00563 EAL domain 320 554 3.4E-63 T 28-03-2018 IPR001633 EAL domain AL549_RS15950 2cccb68d2b4240acf8e13b8ec614cafe 571 Gene3D G3DSA:3.30.70.270 150 311 2.3E-20 T 28-03-2018 AL549_RS15950 2cccb68d2b4240acf8e13b8ec614cafe 571 SMART SM00267 134 303 1.2E-7 T 28-03-2018 IPR000160 GGDEF domain AL549_RS15950 2cccb68d2b4240acf8e13b8ec614cafe 571 Gene3D G3DSA:3.20.20.450 315 570 1.5E-76 T 28-03-2018 IPR001633 EAL domain AL549_RS15950 2cccb68d2b4240acf8e13b8ec614cafe 571 Pfam PF00990 Diguanylate cyclase, GGDEF domain 145 296 4.1E-12 T 28-03-2018 IPR000160 GGDEF domain AL549_RS15950 2cccb68d2b4240acf8e13b8ec614cafe 571 SUPERFAMILY SSF141868 318 564 1.7E-72 T 28-03-2018 IPR001633 EAL domain AL549_RS15950 2cccb68d2b4240acf8e13b8ec614cafe 571 SUPERFAMILY SSF55073 152 304 1.18E-14 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS15950 2cccb68d2b4240acf8e13b8ec614cafe 571 Pfam PF08447 PAS fold 45 121 4.8E-11 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 AL549_RS15950 2cccb68d2b4240acf8e13b8ec614cafe 571 Gene3D G3DSA:3.30.450.20 17 149 4.6E-22 T 28-03-2018 AL549_RS15950 2cccb68d2b4240acf8e13b8ec614cafe 571 SMART SM00086 94 134 1.0E-5 T 28-03-2018 IPR001610 PAC motif AL549_RS15950 2cccb68d2b4240acf8e13b8ec614cafe 571 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 138 2.0E-12 T 28-03-2018 IPR000014 PAS domain AL549_RS15950 2cccb68d2b4240acf8e13b8ec614cafe 571 SUPERFAMILY SSF55785 26 136 1.5E-16 T 28-03-2018 IPR000014 PAS domain AL549_RS15950 2cccb68d2b4240acf8e13b8ec614cafe 571 SMART SM00052 313 559 1.1E-66 T 28-03-2018 IPR001633 EAL domain AL549_RS23220 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 28-03-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23220 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 4.0E-32 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23220 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 Gene3D G3DSA:4.10.910.10 85 118 1.4E-25 T 28-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23220 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 Gene3D G3DSA:4.10.910.10 67 84 1.3E-19 T 28-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23220 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 PIRSF PIRSF002134 1 118 3.3E-41 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23220 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.795 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23220 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 SUPERFAMILY SSF46946 2 114 6.62E-45 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AL549_RS23220 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 Gene3D G3DSA:1.10.8.50 1 66 1.7E-23 T 28-03-2018 AL549_RS23220 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.2E-53 T 28-03-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS06035 e41948874cfdd859b46ec3ccd042a64f 459 PIRSF PIRSF002808 9 454 5.3E-103 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AL549_RS06035 e41948874cfdd859b46ec3ccd042a64f 459 Gene3D G3DSA:1.20.1250.20 21 214 3.5E-24 T 28-03-2018 AL549_RS06035 e41948874cfdd859b46ec3ccd042a64f 459 SUPERFAMILY SSF103473 19 449 1.83E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS06035 e41948874cfdd859b46ec3ccd042a64f 459 Gene3D G3DSA:1.20.1250.20 236 452 1.7E-23 T 28-03-2018 AL549_RS06035 e41948874cfdd859b46ec3ccd042a64f 459 Pfam PF07690 Major Facilitator Superfamily 36 392 9.9E-43 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS08095 adbbf779762fad5178c36ff4d1cc0ad1 700 Gene3D G3DSA:3.30.870.10 500 686 6.0E-34 T 28-03-2018 AL549_RS08095 adbbf779762fad5178c36ff4d1cc0ad1 700 Pfam PF02503 Polyphosphate kinase middle domain 119 319 6.0E-46 T 28-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AL549_RS08095 adbbf779762fad5178c36ff4d1cc0ad1 700 SUPERFAMILY SSF56024 500 683 8.75E-68 T 28-03-2018 AL549_RS08095 adbbf779762fad5178c36ff4d1cc0ad1 700 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 9.6E-147 T 28-03-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AL549_RS08095 adbbf779762fad5178c36ff4d1cc0ad1 700 Gene3D G3DSA:3.30.1840.10 109 307 1.1E-55 T 28-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AL549_RS08095 adbbf779762fad5178c36ff4d1cc0ad1 700 Gene3D G3DSA:1.20.58.310 9 108 1.9E-33 T 28-03-2018 AL549_RS08095 adbbf779762fad5178c36ff4d1cc0ad1 700 SUPERFAMILY SSF56024 315 494 1.95E-56 T 28-03-2018 AL549_RS08095 adbbf779762fad5178c36ff4d1cc0ad1 700 Gene3D G3DSA:3.30.870.10 321 499 1.8E-23 T 28-03-2018 AL549_RS08095 adbbf779762fad5178c36ff4d1cc0ad1 700 Hamap MF_00347 Polyphosphate kinase [ppk]. 5 681 27.215 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AL549_RS08095 adbbf779762fad5178c36ff4d1cc0ad1 700 SUPERFAMILY SSF143724 107 313 5.1E-63 T 28-03-2018 AL549_RS08095 adbbf779762fad5178c36ff4d1cc0ad1 700 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 6.1E-265 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AL549_RS08095 adbbf779762fad5178c36ff4d1cc0ad1 700 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 1.1E-30 T 28-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AL549_RS08095 adbbf779762fad5178c36ff4d1cc0ad1 700 SUPERFAMILY SSF140356 4 105 3.53E-32 T 28-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AL549_RS08095 adbbf779762fad5178c36ff4d1cc0ad1 700 PIRSF PIRSF015589 1 694 4.4E-254 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AL549_RS03285 c2253c89369d5c74e87eb3025ffb3ae2 129 SUPERFAMILY SSF103247 1 126 2.35E-36 T 28-03-2018 IPR005180 Domain of unknown function DUF302 AL549_RS03285 c2253c89369d5c74e87eb3025ffb3ae2 129 Pfam PF03625 Domain of unknown function DUF302 34 97 3.7E-27 T 28-03-2018 IPR005180 Domain of unknown function DUF302 AL549_RS03285 c2253c89369d5c74e87eb3025ffb3ae2 129 Gene3D G3DSA:3.30.310.70 1 128 1.4E-35 T 28-03-2018 IPR005180 Domain of unknown function DUF302 AL549_RS03285 c2253c89369d5c74e87eb3025ffb3ae2 129 PIRSF PIRSF021774 1 129 2.1E-46 T 28-03-2018 IPR016796 Uncharacterised conserved protein UCP021774 AL549_RS01435 5bdbaf8bcd82529306d56bd1eaee369a 365 SUPERFAMILY SSF50331 237 360 1.73E-15 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL549_RS01435 5bdbaf8bcd82529306d56bd1eaee369a 365 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS01435 5bdbaf8bcd82529306d56bd1eaee369a 365 SMART SM00382 28 210 1.8E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS01435 5bdbaf8bcd82529306d56bd1eaee369a 365 Gene3D G3DSA:3.40.50.300 2 242 5.8E-74 T 28-03-2018 AL549_RS01435 5bdbaf8bcd82529306d56bd1eaee369a 365 SUPERFAMILY SSF52540 4 243 1.0E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS01435 5bdbaf8bcd82529306d56bd1eaee369a 365 Pfam PF00005 ABC transporter 20 161 1.8E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS01435 5bdbaf8bcd82529306d56bd1eaee369a 365 Gene3D G3DSA:2.40.50.100 302 362 0.35 T 28-03-2018 AL549_RS01435 5bdbaf8bcd82529306d56bd1eaee369a 365 Gene3D G3DSA:2.40.50.100 243 299 5.1E-8 T 28-03-2018 AL549_RS09275 f83fd44d1f240ae390306b648a59bb91 284 Gene3D G3DSA:1.25.40.10 117 196 5.4E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS09275 f83fd44d1f240ae390306b648a59bb91 284 SUPERFAMILY SSF48452 120 243 7.3E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS09275 f83fd44d1f240ae390306b648a59bb91 284 Pfam PF14559 Tetratricopeptide repeat 125 190 1.2E-11 T 28-03-2018 AL549_RS09275 f83fd44d1f240ae390306b648a59bb91 284 Pfam PF00085 Thioredoxin 7 109 3.1E-13 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 AL549_RS09275 f83fd44d1f240ae390306b648a59bb91 284 SUPERFAMILY SSF52833 4 111 4.62E-25 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS09275 f83fd44d1f240ae390306b648a59bb91 284 Gene3D G3DSA:1.25.40.10 197 284 1.4E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS09275 f83fd44d1f240ae390306b648a59bb91 284 Pfam PF14561 Tetratricopeptide repeat 197 284 3.2E-25 T 28-03-2018 AL549_RS09275 f83fd44d1f240ae390306b648a59bb91 284 Gene3D G3DSA:3.40.30.10 5 116 1.0E-21 T 28-03-2018 AL549_RS04545 26de63437eb8ade36db59db03d52ed5a 663 Gene3D G3DSA:3.40.50.970 1 362 8.9E-128 T 28-03-2018 AL549_RS04545 26de63437eb8ade36db59db03d52ed5a 663 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 3.9E-48 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL549_RS04545 26de63437eb8ade36db59db03d52ed5a 663 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL549_RS04545 26de63437eb8ade36db59db03d52ed5a 663 SMART SM00861 353 524 5.8E-68 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL549_RS04545 26de63437eb8ade36db59db03d52ed5a 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 332 8.1E-168 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL549_RS04545 26de63437eb8ade36db59db03d52ed5a 663 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL549_RS04545 26de63437eb8ade36db59db03d52ed5a 663 Gene3D G3DSA:3.40.50.920 540 663 7.9E-34 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL549_RS04545 26de63437eb8ade36db59db03d52ed5a 663 Pfam PF02780 Transketolase, C-terminal domain 540 654 1.9E-21 T 28-03-2018 IPR033248 Transketolase, C-terminal domain AL549_RS04545 26de63437eb8ade36db59db03d52ed5a 663 SUPERFAMILY SSF52518 4 319 3.75E-121 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS04545 26de63437eb8ade36db59db03d52ed5a 663 SUPERFAMILY SSF52922 532 663 2.62E-45 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL549_RS04545 26de63437eb8ade36db59db03d52ed5a 663 Gene3D G3DSA:3.40.50.970 363 539 1.3E-42 T 28-03-2018 AL549_RS04545 26de63437eb8ade36db59db03d52ed5a 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 4 662 0.0 T 28-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AL549_RS04545 26de63437eb8ade36db59db03d52ed5a 663 SUPERFAMILY SSF52518 332 525 1.43E-68 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS08710 956b097a3c833ba26bd2fc3410cc9195 247 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 98 106 - T 28-03-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 AL549_RS08710 956b097a3c833ba26bd2fc3410cc9195 247 Pfam PF01223 DNA/RNA non-specific endonuclease 22 229 4.2E-57 T 28-03-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 AL549_RS08710 956b097a3c833ba26bd2fc3410cc9195 247 Gene3D G3DSA:3.40.570.10 20 241 6.6E-70 T 28-03-2018 AL549_RS08710 956b097a3c833ba26bd2fc3410cc9195 247 SMART SM00892 38 230 1.4E-64 T 28-03-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 AL549_RS08710 956b097a3c833ba26bd2fc3410cc9195 247 SMART SM00477 39 230 6.1E-64 T 28-03-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 AL549_RS08710 956b097a3c833ba26bd2fc3410cc9195 247 SUPERFAMILY SSF54060 21 239 4.24E-70 T 28-03-2018 AL549_RS03245 f43470e7d7596ec77b038b04601fdb40 155 SUPERFAMILY SSF49785 21 144 1.56E-20 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS03245 f43470e7d7596ec77b038b04601fdb40 155 Gene3D G3DSA:2.60.120.260 17 149 3.4E-18 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS03245 f43470e7d7596ec77b038b04601fdb40 155 Pfam PF00754 F5/8 type C domain 26 132 9.5E-13 T 28-03-2018 IPR000421 Coagulation factor 5/8 C-terminal domain AL549_RS23175 3f16209064057c8aae87abe0bb031afc 101 Gene3D G3DSA:4.10.830.10 1 101 5.6E-33 T 28-03-2018 AL549_RS23175 3f16209064057c8aae87abe0bb031afc 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.0E-24 T 28-03-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23175 3f16209064057c8aae87abe0bb031afc 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.871 T 28-03-2018 IPR023036 Ribosomal protein S14, bacterial/plastid AL549_RS23175 3f16209064057c8aae87abe0bb031afc 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 28-03-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23175 3f16209064057c8aae87abe0bb031afc 101 SUPERFAMILY SSF57716 2 101 5.99E-37 T 28-03-2018 AL549_RS04700 9c5d6022174155d7105ccb88ca5aabe1 69 SUPERFAMILY SSF50249 3 68 8.81E-24 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS04700 9c5d6022174155d7105ccb88ca5aabe1 69 Gene3D G3DSA:2.40.50.140 1 69 1.0E-27 T 28-03-2018 AL549_RS04700 9c5d6022174155d7105ccb88ca5aabe1 69 SMART SM00357 6 69 3.9E-30 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AL549_RS04700 9c5d6022174155d7105ccb88ca5aabe1 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 28-03-2018 IPR019844 Cold-shock conserved site AL549_RS04700 9c5d6022174155d7105ccb88ca5aabe1 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 4.9E-29 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL549_RS04700 9c5d6022174155d7105ccb88ca5aabe1 69 PIRSF PIRSF002599 1 69 2.2E-23 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 AL549_RS04700 9c5d6022174155d7105ccb88ca5aabe1 69 PRINTS PR00050 Cold shock protein signature 7 22 7.1E-17 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL549_RS04700 9c5d6022174155d7105ccb88ca5aabe1 69 PRINTS PR00050 Cold shock protein signature 42 60 7.1E-17 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL549_RS04700 9c5d6022174155d7105ccb88ca5aabe1 69 PRINTS PR00050 Cold shock protein signature 27 36 7.1E-17 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL549_RS06240 d74d4675d6dd7b0add98341fe5f17501 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS06240 d74d4675d6dd7b0add98341fe5f17501 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS06240 d74d4675d6dd7b0add98341fe5f17501 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS06240 d74d4675d6dd7b0add98341fe5f17501 301 Gene3D G3DSA:3.40.190.10 95 180 1.9E-13 T 28-03-2018 AL549_RS06240 d74d4675d6dd7b0add98341fe5f17501 301 SUPERFAMILY SSF53850 88 294 5.79E-37 T 28-03-2018 AL549_RS06240 d74d4675d6dd7b0add98341fe5f17501 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.6E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS06240 d74d4675d6dd7b0add98341fe5f17501 301 Gene3D G3DSA:3.40.190.10 255 300 1.2E-4 T 28-03-2018 AL549_RS06240 d74d4675d6dd7b0add98341fe5f17501 301 Pfam PF03466 LysR substrate binding domain 96 296 1.1E-24 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS06240 d74d4675d6dd7b0add98341fe5f17501 301 SUPERFAMILY SSF46785 2 82 9.8E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS06240 d74d4675d6dd7b0add98341fe5f17501 301 Gene3D G3DSA:1.10.10.10 1 94 2.1E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS06240 d74d4675d6dd7b0add98341fe5f17501 301 Gene3D G3DSA:3.40.190.10 181 254 6.2E-9 T 28-03-2018 AL549_RS05550 c27804c8bb025488359c8786252873a9 334 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 29 326 2.7E-60 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL549_RS05550 c27804c8bb025488359c8786252873a9 334 SUPERFAMILY SSF111369 39 267 4.05E-26 T 28-03-2018 AL549_RS05550 c27804c8bb025488359c8786252873a9 334 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 259 2.8E-16 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL549_RS05550 c27804c8bb025488359c8786252873a9 334 Gene3D G3DSA:3.90.1170.30 7 93 5.2E-7 T 28-03-2018 AL549_RS05550 c27804c8bb025488359c8786252873a9 334 Gene3D G3DSA:1.10.287.470 94 151 4.0E-10 T 28-03-2018 AL549_RS05550 c27804c8bb025488359c8786252873a9 334 Gene3D G3DSA:2.40.50.100 152 232 3.0E-9 T 28-03-2018 AL549_RS07855 8abd770796337a055dd2ce38c16f53e0 283 SUPERFAMILY SSF55831 2 283 2.88E-91 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL549_RS07855 8abd770796337a055dd2ce38c16f53e0 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 7.7E-14 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL549_RS07855 8abd770796337a055dd2ce38c16f53e0 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 7.7E-14 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL549_RS07855 8abd770796337a055dd2ce38c16f53e0 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 7.7E-14 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL549_RS07855 8abd770796337a055dd2ce38c16f53e0 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 7.7E-14 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL549_RS07855 8abd770796337a055dd2ce38c16f53e0 283 Pfam PF00303 Thymidylate synthase 2 283 1.4E-74 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL549_RS07855 8abd770796337a055dd2ce38c16f53e0 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 28-03-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL549_RS07855 8abd770796337a055dd2ce38c16f53e0 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 1.6E-42 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL549_RS07855 8abd770796337a055dd2ce38c16f53e0 283 Gene3D G3DSA:3.30.572.10 1 283 9.3E-80 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL549_RS07855 8abd770796337a055dd2ce38c16f53e0 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 33.406 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL549_RS01480 10ebdcdd3a5dec87d5cb282acff0b2ee 363 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 212 360 9.4E-31 T 28-03-2018 IPR000160 GGDEF domain AL549_RS01480 10ebdcdd3a5dec87d5cb282acff0b2ee 363 Gene3D G3DSA:3.30.70.270 210 363 9.5E-41 T 28-03-2018 AL549_RS01480 10ebdcdd3a5dec87d5cb282acff0b2ee 363 SUPERFAMILY SSF55073 219 361 7.77E-37 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS01480 10ebdcdd3a5dec87d5cb282acff0b2ee 363 SMART SM00267 202 363 7.9E-32 T 28-03-2018 IPR000160 GGDEF domain AL549_RS01480 10ebdcdd3a5dec87d5cb282acff0b2ee 363 Pfam PF00990 Diguanylate cyclase, GGDEF domain 215 360 8.5E-35 T 28-03-2018 IPR000160 GGDEF domain AL549_RS17245 ee32bd45e834d7e4596fc6e6a1483a4c 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL549_RS17245 ee32bd45e834d7e4596fc6e6a1483a4c 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL549_RS17245 ee32bd45e834d7e4596fc6e6a1483a4c 361 Gene3D G3DSA:3.60.150.10 3 359 2.6E-164 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL549_RS17245 ee32bd45e834d7e4596fc6e6a1483a4c 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 38.041 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL549_RS17245 ee32bd45e834d7e4596fc6e6a1483a4c 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 9.2E-145 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL549_RS17245 ee32bd45e834d7e4596fc6e6a1483a4c 361 SUPERFAMILY SSF103263 4 354 3.53E-151 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL549_RS17245 ee32bd45e834d7e4596fc6e6a1483a4c 361 PIRSF PIRSF001456 3 360 9.4E-145 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL549_RS17245 ee32bd45e834d7e4596fc6e6a1483a4c 361 Pfam PF01264 Chorismate synthase 10 345 2.1E-145 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL549_RS17245 ee32bd45e834d7e4596fc6e6a1483a4c 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL549_RS08175 ab220e77a1001a7112018169926bc063 400 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 136 150 7.0E-15 T 28-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL549_RS08175 ab220e77a1001a7112018169926bc063 400 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 263 275 7.0E-15 T 28-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL549_RS08175 ab220e77a1001a7112018169926bc063 400 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 52 67 7.0E-15 T 28-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL549_RS08175 ab220e77a1001a7112018169926bc063 400 Gene3D G3DSA:2.40.10.10 148 323 1.5E-24 T 28-03-2018 AL549_RS08175 ab220e77a1001a7112018169926bc063 400 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 378 398 1.8E-5 T 28-03-2018 IPR020008 GlyGly-CTERM domain AL549_RS08175 ab220e77a1001a7112018169926bc063 400 SMART SM00020 24 315 2.3E-29 T 28-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL549_RS08175 ab220e77a1001a7112018169926bc063 400 Pfam PF00089 Trypsin 36 315 4.8E-29 T 28-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL549_RS08175 ab220e77a1001a7112018169926bc063 400 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 264 275 - T 28-03-2018 IPR033116 Serine proteases, trypsin family, serine active site AL549_RS08175 ab220e77a1001a7112018169926bc063 400 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 62 67 - T 28-03-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AL549_RS08175 ab220e77a1001a7112018169926bc063 400 Gene3D G3DSA:2.40.10.10 57 147 1.2E-17 T 28-03-2018 AL549_RS08175 ab220e77a1001a7112018169926bc063 400 Gene3D G3DSA:2.40.10.10 23 56 3.0E-9 T 28-03-2018 AL549_RS08175 ab220e77a1001a7112018169926bc063 400 SUPERFAMILY SSF50494 36 319 2.54E-41 T 28-03-2018 IPR009003 Peptidase S1, PA clan AL549_RS11535 3788b2a46102bc1aa866953428125bb6 415 Gene3D G3DSA:1.20.1090.10 183 390 4.7E-39 T 28-03-2018 AL549_RS11535 3788b2a46102bc1aa866953428125bb6 415 Gene3D G3DSA:3.40.50.1970 8 179 3.6E-38 T 28-03-2018 AL549_RS11535 3788b2a46102bc1aa866953428125bb6 415 SUPERFAMILY SSF56796 1 380 5.63E-89 T 28-03-2018 AL549_RS11535 3788b2a46102bc1aa866953428125bb6 415 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 2.3E-91 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL549_RS14300 54de5c4444671663861b8d0f36f8d006 135 SUPERFAMILY SSF55811 9 134 4.47E-22 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL549_RS14300 54de5c4444671663861b8d0f36f8d006 135 PRINTS PR00502 NUDIX hydrolase family signature 48 63 3.1E-6 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL549_RS14300 54de5c4444671663861b8d0f36f8d006 135 PRINTS PR00502 NUDIX hydrolase family signature 34 48 3.1E-6 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL549_RS14300 54de5c4444671663861b8d0f36f8d006 135 Pfam PF00293 NUDIX domain 14 115 1.0E-11 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL549_RS14300 54de5c4444671663861b8d0f36f8d006 135 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL549_RS14300 54de5c4444671663861b8d0f36f8d006 135 Gene3D G3DSA:3.90.79.10 7 134 5.0E-18 T 28-03-2018 AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82866 289 490 2.35E-41 T 28-03-2018 AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82714 184 263 1.18E-10 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 Pfam PF00873 AcrB/AcrD/AcrF family 9 1021 1.9E-169 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 8.4E-28 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 8.4E-28 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 8.4E-28 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 8.4E-28 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 8.4E-28 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 8.4E-28 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82714 706 788 4.05E-5 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:3.30.70.1430 41 142 6.0E-24 T 28-03-2018 AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82693 41 133 2.17E-22 T 28-03-2018 AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:3.30.2090.10 180 265 5.3E-11 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:3.30.2090.10 705 790 7.6E-9 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:1.20.1640.10 266 492 1.7E-42 T 28-03-2018 AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:1.20.1640.10 791 1024 4.2E-44 T 28-03-2018 AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:3.30.70.1430 567 655 5.0E-7 T 28-03-2018 AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82693 267 325 4.39E-13 T 28-03-2018 AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82693 147 181 4.39E-13 T 28-03-2018 AL549_RS18660 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82866 787 1023 2.62E-49 T 28-03-2018 AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 Gene3D G3DSA:2.40.10.10 140 257 1.1E-42 T 28-03-2018 AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 SUPERFAMILY SSF50156 381 452 1.58E-14 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 1.5E-57 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 1.5E-57 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 1.5E-57 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 1.5E-57 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 1.5E-57 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 1.5E-57 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 Gene3D G3DSA:2.30.42.10 262 366 2.0E-29 T 28-03-2018 AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 SUPERFAMILY SSF50494 89 275 2.7E-64 T 28-03-2018 IPR009003 Peptidase S1, PA clan AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 SUPERFAMILY SSF50494 11 58 2.7E-64 T 28-03-2018 IPR009003 Peptidase S1, PA clan AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 Gene3D G3DSA:2.40.10.10 29 139 4.0E-32 T 28-03-2018 AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 SMART SM00228 374 447 3.6E-7 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 SMART SM00228 267 349 6.2E-16 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 2.2E-31 T 28-03-2018 AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 373 444 2.0E-7 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 1.2E-164 T 28-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 SUPERFAMILY SSF50156 233 350 8.25E-24 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 Pfam PF13180 PDZ domain 269 358 7.7E-17 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL549_RS07420 41e549eec986ff5589ef642f22272a55 455 Gene3D G3DSA:2.30.42.10 367 455 1.3E-13 T 28-03-2018 AL549_RS00220 294be68609dea3148b8d9e4a77ff8676 279 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 34 279 2.7E-125 T 28-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AL549_RS00220 294be68609dea3148b8d9e4a77ff8676 279 SMART SM00382 58 250 1.2E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS00220 294be68609dea3148b8d9e4a77ff8676 279 Gene3D G3DSA:3.40.50.300 20 277 2.8E-58 T 28-03-2018 AL549_RS00220 294be68609dea3148b8d9e4a77ff8676 279 ProSitePatterns PS00211 ABC transporters family signature. 176 190 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS00220 294be68609dea3148b8d9e4a77ff8676 279 Pfam PF00005 ABC transporter 49 204 4.4E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS00220 294be68609dea3148b8d9e4a77ff8676 279 SUPERFAMILY SSF52540 32 265 3.03E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS09365 d9c1ade862632a7d27523bff8bc598cb 168 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 165 3.1E-62 T 28-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 AL549_RS09365 d9c1ade862632a7d27523bff8bc598cb 168 SUPERFAMILY SSF50104 116 165 2.51E-5 T 28-03-2018 IPR008991 Translation protein SH3-like domain AL549_RS09365 d9c1ade862632a7d27523bff8bc598cb 168 Gene3D G3DSA:2.30.30.30 115 166 9.3E-6 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 AL549_RS09365 d9c1ade862632a7d27523bff8bc598cb 168 SUPERFAMILY SSF82679 1 104 7.06E-30 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL549_RS09365 d9c1ade862632a7d27523bff8bc598cb 168 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 167 46.13 T 28-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 AL549_RS09365 d9c1ade862632a7d27523bff8bc598cb 168 Pfam PF02357 Transcription termination factor nusG 2 94 1.1E-21 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL549_RS09365 d9c1ade862632a7d27523bff8bc598cb 168 SMART SM00738 1 101 3.3E-29 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL549_RS09365 d9c1ade862632a7d27523bff8bc598cb 168 Gene3D G3DSA:3.30.70.940 1 104 1.3E-21 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL549_RS04790 a4876806930848ac039b4786bbf89d55 185 Gene3D G3DSA:3.30.1020.10 151 181 1.4E-9 T 28-03-2018 AL549_RS04790 a4876806930848ac039b4786bbf89d55 185 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 154 179 1.5E-6 T 28-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL549_RS04790 a4876806930848ac039b4786bbf89d55 185 Pfam PF00578 AhpC/TSA family 7 131 2.4E-33 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL549_RS04790 a4876806930848ac039b4786bbf89d55 185 Gene3D G3DSA:3.40.30.10 2 150 1.8E-33 T 28-03-2018 AL549_RS04790 a4876806930848ac039b4786bbf89d55 185 SUPERFAMILY SSF52833 2 184 5.74E-55 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS04790 a4876806930848ac039b4786bbf89d55 185 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 185 1.4E-103 T 28-03-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL549_RS04790 a4876806930848ac039b4786bbf89d55 185 PIRSF PIRSF000239 1 185 7.3E-53 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL549_RS08345 30c341e80d3ef626e6d9bcb6ee6ff1c1 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 175 1.0E-35 T 28-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 AL549_RS08345 30c341e80d3ef626e6d9bcb6ee6ff1c1 197 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 28-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 AL549_RS07835 389b2d48e0f5cf720bab8b76b089ec83 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 7.5E-8 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL549_RS07835 389b2d48e0f5cf720bab8b76b089ec83 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 7.5E-8 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL549_RS07835 389b2d48e0f5cf720bab8b76b089ec83 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL549_RS07835 389b2d48e0f5cf720bab8b76b089ec83 172 Pfam PF00293 NUDIX domain 7 145 3.1E-27 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL549_RS07835 389b2d48e0f5cf720bab8b76b089ec83 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.482 T 28-03-2018 IPR022927 RNA pyrophosphohydrolase RppH AL549_RS07835 389b2d48e0f5cf720bab8b76b089ec83 172 SUPERFAMILY SSF55811 6 152 1.22E-31 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL549_RS07835 389b2d48e0f5cf720bab8b76b089ec83 172 Gene3D G3DSA:3.90.79.10 1 164 6.1E-33 T 28-03-2018 AL549_RS15220 3e8f1842d5f1085b9c43333530c381d7 44 Pfam PF11665 Protein of unknown function (DUF3265) 17 44 1.3E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS13970 3e8f1842d5f1085b9c43333530c381d7 44 Pfam PF11665 Protein of unknown function (DUF3265) 17 44 1.3E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS09175 982f589fee58374ffa26f77c1b2896f3 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AL549_RS09175 982f589fee58374ffa26f77c1b2896f3 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 1.1E-30 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL549_RS09175 982f589fee58374ffa26f77c1b2896f3 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 3.7E-38 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL549_RS09175 982f589fee58374ffa26f77c1b2896f3 262 SUPERFAMILY SSF117143 93 223 5.75E-33 T 28-03-2018 AL549_RS09175 982f589fee58374ffa26f77c1b2896f3 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 4.5E-24 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL549_RS09175 982f589fee58374ffa26f77c1b2896f3 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 1.7E-115 T 28-03-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AL549_RS09175 982f589fee58374ffa26f77c1b2896f3 262 Pfam PF00460 Flagella basal body rod protein 5 35 6.9E-11 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL549_RS16135 e39e2688071dde0348c18fea5c4ef5bb 212 Gene3D G3DSA:1.10.10.10 130 212 8.7E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS16135 e39e2688071dde0348c18fea5c4ef5bb 212 Pfam PF00072 Response regulator receiver domain 7 119 2.6E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS16135 e39e2688071dde0348c18fea5c4ef5bb 212 SMART SM00448 5 118 7.9E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS16135 e39e2688071dde0348c18fea5c4ef5bb 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 5.8E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS16135 e39e2688071dde0348c18fea5c4ef5bb 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 5.8E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS16135 e39e2688071dde0348c18fea5c4ef5bb 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 5.8E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS16135 e39e2688071dde0348c18fea5c4ef5bb 212 SUPERFAMILY SSF52172 4 135 5.69E-36 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS16135 e39e2688071dde0348c18fea5c4ef5bb 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 7.2E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS16135 e39e2688071dde0348c18fea5c4ef5bb 212 SUPERFAMILY SSF46894 139 211 1.29E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS16135 e39e2688071dde0348c18fea5c4ef5bb 212 SMART SM00421 148 205 5.6E-21 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS16135 e39e2688071dde0348c18fea5c4ef5bb 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS16135 e39e2688071dde0348c18fea5c4ef5bb 212 Gene3D G3DSA:3.40.50.2300 4 129 1.0E-38 T 28-03-2018 AL549_RS02120 d2373330db96de20461346bf245e4ec5 206 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 149 183 5.4E-10 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS02120 d2373330db96de20461346bf245e4ec5 206 Gene3D G3DSA:2.160.10.10 17 205 6.6E-50 T 28-03-2018 AL549_RS02120 d2373330db96de20461346bf245e4ec5 206 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 157 185 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL549_RS02120 d2373330db96de20461346bf245e4ec5 206 SUPERFAMILY SSF51161 22 202 7.35E-52 T 28-03-2018 IPR011004 Trimeric LpxA-like AL549_RS02120 d2373330db96de20461346bf245e4ec5 206 SMART SM01266 24 77 2.4E-13 T 28-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL549_RS02120 d2373330db96de20461346bf245e4ec5 206 Pfam PF12464 Maltose acetyltransferase 26 68 3.8E-12 T 28-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL549_RS01845 1f75924a0d34aa7b3d8ed19e83697bca 268 Pfam PF14247 Putative metallopeptidase 41 263 8.1E-67 T 28-03-2018 IPR025644 Putative metallopeptidase AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 SUPERFAMILY SSF47384 275 356 1.04E-22 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 Gene3D G3DSA:3.40.50.2300 659 823 5.4E-39 T 28-03-2018 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 SMART SM00073 826 924 3.9E-6 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 SUPERFAMILY SSF55874 344 517 1.02E-44 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 SUPERFAMILY SSF158472 200 247 4.84E-6 T 28-03-2018 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 SUPERFAMILY SSF52172 664 782 2.7E-36 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 SMART SM00304 198 250 3.3E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 Pfam PF01627 Hpt domain 836 917 1.5E-11 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 Gene3D G3DSA:1.10.287.130 280 351 1.1E-21 T 28-03-2018 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 Pfam PF00072 Response regulator receiver domain 668 778 1.4E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 516 1.1E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 SUPERFAMILY SSF52172 532 644 1.24E-5 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 SMART SM00388 290 355 3.4E-24 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 SMART SM00387 402 518 5.0E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 Gene3D G3DSA:1.20.120.160 824 928 6.4E-15 T 28-03-2018 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 2.8E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 SUPERFAMILY SSF47226 762 775 1.3E-20 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 SUPERFAMILY SSF47226 816 916 1.3E-20 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 9.3E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 9.3E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 9.3E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 9.3E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 Gene3D G3DSA:3.30.565.10 359 525 2.2E-49 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 SMART SM00448 666 779 7.4E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 Gene3D G3DSA:3.40.50.2300 526 649 0.026 T 28-03-2018 AL549_RS19160 f632c1a3916b7cc866b05acb032efccf 928 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 175 2.4E-50 T 28-03-2018 IPR019247 Histidine kinase BarA, N-terminal AL549_RS10740 b62b83239ba9604b43b9d961b205db76 212 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 27.325 T 28-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL549_RS10740 b62b83239ba9604b43b9d961b205db76 212 Pfam PF02223 Thymidylate kinase 9 199 3.7E-58 T 28-03-2018 AL549_RS10740 b62b83239ba9604b43b9d961b205db76 212 Gene3D G3DSA:3.40.50.300 1 207 9.0E-49 T 28-03-2018 AL549_RS10740 b62b83239ba9604b43b9d961b205db76 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 8.0E-64 T 28-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL549_RS10740 b62b83239ba9604b43b9d961b205db76 212 SUPERFAMILY SSF52540 1 210 1.4E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS10740 b62b83239ba9604b43b9d961b205db76 212 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 28-03-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL549_RS01685 6b36006aaf4144c21917b711fcdd1d14 392 Gene3D G3DSA:3.40.190.10 28 220 1.3E-30 T 28-03-2018 AL549_RS01685 6b36006aaf4144c21917b711fcdd1d14 392 Pfam PF13416 Bacterial extracellular solute-binding protein 47 327 2.0E-42 T 28-03-2018 AL549_RS01685 6b36006aaf4144c21917b711fcdd1d14 392 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 129 146 - T 28-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 AL549_RS01685 6b36006aaf4144c21917b711fcdd1d14 392 Gene3D G3DSA:3.40.190.10 221 389 3.3E-6 T 28-03-2018 AL549_RS01685 6b36006aaf4144c21917b711fcdd1d14 392 PRINTS PR00181 Maltose binding protein signature 147 166 2.6E-66 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL549_RS01685 6b36006aaf4144c21917b711fcdd1d14 392 PRINTS PR00181 Maltose binding protein signature 167 186 2.6E-66 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL549_RS01685 6b36006aaf4144c21917b711fcdd1d14 392 PRINTS PR00181 Maltose binding protein signature 66 84 2.6E-66 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL549_RS01685 6b36006aaf4144c21917b711fcdd1d14 392 PRINTS PR00181 Maltose binding protein signature 295 316 2.6E-66 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL549_RS01685 6b36006aaf4144c21917b711fcdd1d14 392 PRINTS PR00181 Maltose binding protein signature 353 372 2.6E-66 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL549_RS01685 6b36006aaf4144c21917b711fcdd1d14 392 PRINTS PR00181 Maltose binding protein signature 229 248 2.6E-66 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL549_RS01685 6b36006aaf4144c21917b711fcdd1d14 392 PRINTS PR00181 Maltose binding protein signature 126 145 2.6E-66 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL549_RS01685 6b36006aaf4144c21917b711fcdd1d14 392 PRINTS PR00181 Maltose binding protein signature 32 50 2.6E-66 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL549_RS01685 6b36006aaf4144c21917b711fcdd1d14 392 SUPERFAMILY SSF53850 23 391 1.38E-89 T 28-03-2018 AL549_RS00560 bea67019c1b1e2a88ceb84d69459af6f 674 Pfam PF01483 Proprotein convertase P-domain 595 673 7.0E-20 T 28-03-2018 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 AL549_RS00560 bea67019c1b1e2a88ceb84d69459af6f 674 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 488 498 - T 28-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AL549_RS00560 bea67019c1b1e2a88ceb84d69459af6f 674 SUPERFAMILY SSF54897 41 119 6.38E-6 T 28-03-2018 IPR009020 Protease propeptides/proteinase inhibitor I9 AL549_RS00560 bea67019c1b1e2a88ceb84d69459af6f 674 Gene3D G3DSA:3.30.70.80 35 123 9.9E-8 T 28-03-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AL549_RS00560 bea67019c1b1e2a88ceb84d69459af6f 674 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 186 196 - T 28-03-2018 IPR022398 Peptidase S8, subtilisin, His-active site AL549_RS00560 bea67019c1b1e2a88ceb84d69459af6f 674 SUPERFAMILY SSF49785 563 673 1.57E-20 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS00560 bea67019c1b1e2a88ceb84d69459af6f 674 SUPERFAMILY SSF52743 123 548 4.37E-102 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AL549_RS00560 bea67019c1b1e2a88ceb84d69459af6f 674 Pfam PF05922 Peptidase inhibitor I9 43 120 1.4E-7 T 28-03-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AL549_RS00560 bea67019c1b1e2a88ceb84d69459af6f 674 Gene3D G3DSA:3.40.50.200 124 557 1.8E-79 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AL549_RS00560 bea67019c1b1e2a88ceb84d69459af6f 674 PRINTS PR00723 Subtilisin serine protease family (S8) signature 182 195 6.6E-16 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related AL549_RS00560 bea67019c1b1e2a88ceb84d69459af6f 674 PRINTS PR00723 Subtilisin serine protease family (S8) signature 487 503 6.6E-16 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related AL549_RS00560 bea67019c1b1e2a88ceb84d69459af6f 674 PRINTS PR00723 Subtilisin serine protease family (S8) signature 142 161 6.6E-16 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related AL549_RS00560 bea67019c1b1e2a88ceb84d69459af6f 674 Gene3D G3DSA:2.60.120.260 559 674 3.0E-23 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS00560 bea67019c1b1e2a88ceb84d69459af6f 674 Pfam PF00082 Subtilase family 474 538 4.9E-13 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AL549_RS00560 bea67019c1b1e2a88ceb84d69459af6f 674 Pfam PF00082 Subtilase family 146 345 1.2E-27 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AL549_RS20105 f0095ac62320b40e7416ecfd9878de1c 196 Gene3D G3DSA:3.30.70.60 92 196 1.6E-21 T 28-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AL549_RS20105 f0095ac62320b40e7416ecfd9878de1c 196 Gene3D G3DSA:1.10.287.540 56 91 2.5E-5 T 28-03-2018 AL549_RS20105 f0095ac62320b40e7416ecfd9878de1c 196 Pfam PF04350 Pilus assembly protein, PilO 47 189 8.6E-46 T 28-03-2018 IPR007445 Pilus assembly protein, PilO AL549_RS20105 f0095ac62320b40e7416ecfd9878de1c 196 PIRSF PIRSF016482 1 196 1.6E-66 T 28-03-2018 IPR007445 Pilus assembly protein, PilO AL549_RS23715 a6f227647786086df79416d24d23b2fd 585 Pfam PF13444 Acetyltransferase (GNAT) domain 333 433 1.6E-21 T 28-03-2018 AL549_RS23715 a6f227647786086df79416d24d23b2fd 585 Gene3D G3DSA:3.40.630.30 313 470 2.2E-18 T 28-03-2018 AL549_RS23715 a6f227647786086df79416d24d23b2fd 585 SMART SM00563 75 199 1.4E-5 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS23715 a6f227647786086df79416d24d23b2fd 585 Pfam PF01553 Acyltransferase 66 193 1.3E-5 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS23715 a6f227647786086df79416d24d23b2fd 585 SUPERFAMILY SSF69593 59 243 1.83E-7 T 28-03-2018 AL549_RS23715 a6f227647786086df79416d24d23b2fd 585 Gene3D G3DSA:3.40.1130.10 18 264 2.3E-21 T 28-03-2018 AL549_RS23715 a6f227647786086df79416d24d23b2fd 585 SUPERFAMILY SSF55729 315 455 1.11E-22 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS20750 1b93835f72cc20f04746b8a96e234f26 157 SUPERFAMILY SSF75217 2 155 1.31E-43 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AL549_RS20750 1b93835f72cc20f04746b8a96e234f26 157 Gene3D G3DSA:3.40.1280.10 1 157 2.0E-38 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL549_RS20750 1b93835f72cc20f04746b8a96e234f26 157 PIRSF PIRSF029256 1 157 7.8E-67 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AL549_RS20750 1b93835f72cc20f04746b8a96e234f26 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 156 1.4E-57 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AL549_RS20750 1b93835f72cc20f04746b8a96e234f26 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 154 32.501 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AL549_RS20750 1b93835f72cc20f04746b8a96e234f26 157 Pfam PF00588 SpoU rRNA Methylase family 3 144 6.6E-35 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL549_RS04980 522640f57c5e144b83a1b2f8b81cc598 292 Gene3D G3DSA:3.40.190.10 80 200 2.1E-12 T 28-03-2018 AL549_RS04980 522640f57c5e144b83a1b2f8b81cc598 292 Pfam PF03466 LysR substrate binding domain 111 285 4.6E-15 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS04980 522640f57c5e144b83a1b2f8b81cc598 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.6E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS04980 522640f57c5e144b83a1b2f8b81cc598 292 Gene3D G3DSA:1.10.10.10 1 79 1.4E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS04980 522640f57c5e144b83a1b2f8b81cc598 292 SUPERFAMILY SSF53850 96 289 3.26E-23 T 28-03-2018 AL549_RS04980 522640f57c5e144b83a1b2f8b81cc598 292 SUPERFAMILY SSF46785 1 85 1.77E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS04980 522640f57c5e144b83a1b2f8b81cc598 292 Gene3D G3DSA:3.40.190.10 206 257 0.24 T 28-03-2018 AL549_RS01220 c45507c81a44b746d5ce641fa8b91fdc 309 SUPERFAMILY SSF46689 68 118 1.79E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS01220 c45507c81a44b746d5ce641fa8b91fdc 309 SMART SM00342 31 114 5.7E-32 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS01220 c45507c81a44b746d5ce641fa8b91fdc 309 SMART SM00871 142 307 1.1E-17 T 28-03-2018 IPR010499 Bacterial transcription activator, effector binding AL549_RS01220 c45507c81a44b746d5ce641fa8b91fdc 309 Gene3D G3DSA:1.10.10.60 69 124 5.8E-14 T 28-03-2018 AL549_RS01220 c45507c81a44b746d5ce641fa8b91fdc 309 SUPERFAMILY SSF55136 143 308 4.53E-23 T 28-03-2018 AL549_RS01220 c45507c81a44b746d5ce641fa8b91fdc 309 Gene3D G3DSA:1.10.10.60 4 68 3.4E-14 T 28-03-2018 AL549_RS01220 c45507c81a44b746d5ce641fa8b91fdc 309 SUPERFAMILY SSF46689 15 65 2.6E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS01220 c45507c81a44b746d5ce641fa8b91fdc 309 Pfam PF06445 GyrI-like small molecule binding domain 189 306 4.5E-16 T 28-03-2018 IPR029442 GyrI-like small molecule binding domain AL549_RS01220 c45507c81a44b746d5ce641fa8b91fdc 309 Pfam PF12833 Helix-turn-helix domain 37 116 2.3E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS01220 c45507c81a44b746d5ce641fa8b91fdc 309 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 68 110 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL549_RS01220 c45507c81a44b746d5ce641fa8b91fdc 309 Gene3D G3DSA:3.20.80.10 141 308 2.4E-28 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain AL549_RS01220 c45507c81a44b746d5ce641fa8b91fdc 309 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 98 114 2.1E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS01220 c45507c81a44b746d5ce641fa8b91fdc 309 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 83 98 2.1E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 SUPERFAMILY SSF54980 600 689 2.34E-29 T 28-03-2018 IPR035647 EF-G domain III/V-like AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 SMART SM00889 477 595 1.2E-62 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 SUPERFAMILY SSF54980 401 478 8.99E-21 T 28-03-2018 IPR035647 EF-G domain III/V-like AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 Gene3D G3DSA:3.30.230.10 489 610 1.9E-39 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 Pfam PF00679 Elongation factor G C-terminus 597 683 2.0E-28 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 1.6E-16 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 Gene3D G3DSA:3.30.70.240 611 688 2.9E-29 T 28-03-2018 AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 101.874 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 SUPERFAMILY SSF54211 476 596 1.09E-40 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 Pfam PF03764 Elongation factor G, domain IV 476 594 4.1E-44 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 Gene3D G3DSA:3.30.70.870 393 488 6.2E-31 T 28-03-2018 AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.2E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.2E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.2E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.2E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 SMART SM00838 597 684 2.2E-46 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 SUPERFAMILY SSF52540 3 278 1.11E-99 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 SUPERFAMILY SSF50447 261 399 5.52E-32 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 Gene3D G3DSA:2.40.30.10 271 392 3.6E-29 T 28-03-2018 AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 689 1.6E-297 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 174 3.5E-25 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 Gene3D G3DSA:3.40.50.300 1 270 5.5E-54 T 28-03-2018 AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 Pfam PF14492 Elongation Factor G, domain II 401 474 3.0E-29 T 28-03-2018 AL549_RS18395 dd1704f40460a019941edac47c9dbd3f 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 278 3.7E-60 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS04180 1264ddfde66e7cf67a9badbc06880394 498 Gene3D G3DSA:3.40.50.10260 1 232 1.1E-68 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL549_RS04180 1264ddfde66e7cf67a9badbc06880394 498 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 435 445 - T 28-03-2018 IPR017953 Carbohydrate kinase, predicted, conserved site AL549_RS04180 1264ddfde66e7cf67a9badbc06880394 498 Pfam PF03853 YjeF-related protein N-terminus 33 194 1.1E-47 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL549_RS04180 1264ddfde66e7cf67a9badbc06880394 498 Pfam PF01256 Carbohydrate kinase 253 492 5.9E-62 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AL549_RS04180 1264ddfde66e7cf67a9badbc06880394 498 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 238 496 1.0E-71 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AL549_RS04180 1264ddfde66e7cf67a9badbc06880394 498 Gene3D G3DSA:3.40.1190.20 233 497 1.1E-50 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS04180 1264ddfde66e7cf67a9badbc06880394 498 SUPERFAMILY SSF53613 228 496 1.21E-79 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS04180 1264ddfde66e7cf67a9badbc06880394 498 SUPERFAMILY SSF64153 10 252 2.35E-66 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL549_RS04180 1264ddfde66e7cf67a9badbc06880394 498 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 230 496 22.691 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AL549_RS04180 1264ddfde66e7cf67a9badbc06880394 498 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 12 215 25.162 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL549_RS04180 1264ddfde66e7cf67a9badbc06880394 498 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 14 214 3.6E-53 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL549_RS04180 1264ddfde66e7cf67a9badbc06880394 498 PIRSF PIRSF017184 8 497 4.7E-145 T 28-03-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AL549_RS16820 46ac3b928ad649a04f5744eeaaeb87fa 335 Gene3D G3DSA:3.20.20.70 28 307 5.5E-5 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS16820 46ac3b928ad649a04f5744eeaaeb87fa 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 327 2.3E-91 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AL549_RS16820 46ac3b928ad649a04f5744eeaaeb87fa 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 323 7.6E-111 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AL549_RS16820 46ac3b928ad649a04f5744eeaaeb87fa 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 328 40.28 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AL549_RS16820 46ac3b928ad649a04f5744eeaaeb87fa 335 SUPERFAMILY SSF52540 50 198 6.77E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS22365 ca6d989e18a60a6ab4aff7debe78572c 216 Pfam PF01926 50S ribosome-binding GTPase 29 147 1.2E-20 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS22365 ca6d989e18a60a6ab4aff7debe78572c 216 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 27.303 T 28-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AL549_RS22365 ca6d989e18a60a6ab4aff7debe78572c 216 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 6.4E-73 T 28-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AL549_RS22365 ca6d989e18a60a6ab4aff7debe78572c 216 SUPERFAMILY SSF52540 16 201 1.2E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS22365 ca6d989e18a60a6ab4aff7debe78572c 216 Gene3D G3DSA:3.40.50.300 3 203 2.3E-26 T 28-03-2018 AL549_RS00110 749da48568007ec60a41c9022dc1bb68 404 Pfam PF10082 Putative beta-barrel porin 2 33 402 7.4E-31 T 28-03-2018 IPR018759 Putative beta-barrel porin 2 AL549_RS00110 749da48568007ec60a41c9022dc1bb68 404 Gene3D G3DSA:2.40.160.60 50 404 3.5E-10 T 28-03-2018 AL549_RS03665 b184e76470753ff72534bb11030b3dfa 255 SMART SM00062 24 252 3.3E-9 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS03665 b184e76470753ff72534bb11030b3dfa 255 Gene3D G3DSA:3.40.190.10 145 252 3.7E-11 T 28-03-2018 AL549_RS03665 b184e76470753ff72534bb11030b3dfa 255 SUPERFAMILY SSF53850 25 249 5.74E-37 T 28-03-2018 AL549_RS03665 b184e76470753ff72534bb11030b3dfa 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 249 1.4E-23 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS03665 b184e76470753ff72534bb11030b3dfa 255 Gene3D G3DSA:3.40.190.10 16 144 3.8E-16 T 28-03-2018 AL549_RS18225 102ccfb0bb1d2b0ecfe4f52a6d700ed2 533 SMART SM01049 36 123 2.1E-21 T 28-03-2018 IPR033480 Single Cache domain 2 AL549_RS18225 102ccfb0bb1d2b0ecfe4f52a6d700ed2 533 Gene3D G3DSA:1.10.287.950 312 533 3.6E-52 T 28-03-2018 AL549_RS18225 102ccfb0bb1d2b0ecfe4f52a6d700ed2 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 320 498 2.1E-42 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS18225 102ccfb0bb1d2b0ecfe4f52a6d700ed2 533 Pfam PF00672 HAMP domain 204 249 9.4E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS18225 102ccfb0bb1d2b0ecfe4f52a6d700ed2 533 SMART SM00304 204 256 3.7E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS18225 102ccfb0bb1d2b0ecfe4f52a6d700ed2 533 SMART SM00304 257 309 57.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS18225 102ccfb0bb1d2b0ecfe4f52a6d700ed2 533 SMART SM00283 271 532 1.7E-68 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS18225 102ccfb0bb1d2b0ecfe4f52a6d700ed2 533 Gene3D G3DSA:3.30.450.20 30 187 6.5E-35 T 28-03-2018 AL549_RS18225 102ccfb0bb1d2b0ecfe4f52a6d700ed2 533 SUPERFAMILY SSF58104 224 533 2.35E-72 T 28-03-2018 AL549_RS18225 102ccfb0bb1d2b0ecfe4f52a6d700ed2 533 Pfam PF17200 Single Cache domain 2 40 180 1.8E-28 T 28-03-2018 IPR033480 Single Cache domain 2 AL549_RS18225 102ccfb0bb1d2b0ecfe4f52a6d700ed2 533 Gene3D G3DSA:1.10.287.1060 227 311 2.0E-4 T 28-03-2018 AL549_RS07980 8be138415b523d15b17ed32ac4c09943 651 Gene3D G3DSA:1.10.1240.20 416 479 1.1E-15 T 28-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AL549_RS07980 8be138415b523d15b17ed32ac4c09943 651 Pfam PF01464 Transglycosylase SLT domain 492 604 7.5E-30 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AL549_RS07980 8be138415b523d15b17ed32ac4c09943 651 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 508 536 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AL549_RS07980 8be138415b523d15b17ed32ac4c09943 651 SUPERFAMILY SSF53955 487 645 7.95E-49 T 28-03-2018 IPR023346 Lysozyme-like domain AL549_RS07980 8be138415b523d15b17ed32ac4c09943 651 Gene3D G3DSA:1.25.20.10 35 397 1.4E-39 T 28-03-2018 AL549_RS07980 8be138415b523d15b17ed32ac4c09943 651 Gene3D G3DSA:1.10.530.10 480 651 4.3E-38 T 28-03-2018 AL549_RS07980 8be138415b523d15b17ed32ac4c09943 651 SUPERFAMILY SSF48435 36 484 1.16E-126 T 28-03-2018 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 AL549_RS07980 8be138415b523d15b17ed32ac4c09943 651 Pfam PF14718 Soluble lytic murein transglycosylase L domain 414 479 1.6E-23 T 28-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AL549_RS18390 5695c37b0930d821d4bc88114a8dd81c 307 SUPERFAMILY SSF46785 4 87 5.9E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS18390 5695c37b0930d821d4bc88114a8dd81c 307 Gene3D G3DSA:3.40.190.10 178 261 2.8E-12 T 28-03-2018 AL549_RS18390 5695c37b0930d821d4bc88114a8dd81c 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 6.3E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS18390 5695c37b0930d821d4bc88114a8dd81c 307 Pfam PF03466 LysR substrate binding domain 94 287 6.9E-23 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS18390 5695c37b0930d821d4bc88114a8dd81c 307 SUPERFAMILY SSF53850 95 293 2.17E-27 T 28-03-2018 AL549_RS18390 5695c37b0930d821d4bc88114a8dd81c 307 Gene3D G3DSA:3.40.190.10 92 177 2.5E-11 T 28-03-2018 AL549_RS18390 5695c37b0930d821d4bc88114a8dd81c 307 Gene3D G3DSA:1.10.10.10 3 91 1.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS18390 5695c37b0930d821d4bc88114a8dd81c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS18390 5695c37b0930d821d4bc88114a8dd81c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS18390 5695c37b0930d821d4bc88114a8dd81c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS18775 0d982e11784c1fefebbdabb9c405cef9 398 Pfam PF13556 PucR C-terminal helix-turn-helix domain 321 378 2.6E-20 T 28-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain AL549_RS18775 0d982e11784c1fefebbdabb9c405cef9 398 Gene3D G3DSA:1.10.10.60 310 357 4.2E-7 T 28-03-2018 AL549_RS18775 0d982e11784c1fefebbdabb9c405cef9 398 Pfam PF05651 Putative sugar diacid recognition 3 136 2.9E-53 T 28-03-2018 IPR008599 Putative sugar diacid recognition AL549_RS07700 ccf82cdfae796eaac92a7a4d0541f74c 135 Pfam PF11697 Protein of unknown function (DUF3293) 36 105 2.1E-19 T 28-03-2018 IPR021710 Protein of unknown function DUF3293 AL549_RS16655 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AL549_RS16655 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.7E-27 T 28-03-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AL549_RS16655 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS16655 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL549_RS16655 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AL549_RS16655 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 72 5.0E-36 T 28-03-2018 AL549_RS04355 3b7fd6497389a1c89c0c1b77baf98046 130 Gene3D G3DSA:3.30.1330.40 16 130 2.2E-30 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL549_RS04355 3b7fd6497389a1c89c0c1b77baf98046 130 SUPERFAMILY SSF55298 18 126 6.6E-30 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL549_RS04355 3b7fd6497389a1c89c0c1b77baf98046 130 Pfam PF01042 Endoribonuclease L-PSP 20 123 2.4E-22 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AL549_RS19460 0fc62c55139b9efeae00918bf75a3b08 90 Gene3D G3DSA:1.10.3880.10 2 89 6.2E-42 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL549_RS19460 0fc62c55139b9efeae00918bf75a3b08 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.501 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL549_RS19460 0fc62c55139b9efeae00918bf75a3b08 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 6.0E-40 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL549_RS19460 0fc62c55139b9efeae00918bf75a3b08 90 SUPERFAMILY SSF111148 1 89 7.98E-41 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL549_RS19460 0fc62c55139b9efeae00918bf75a3b08 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.3E-42 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL549_RS19460 0fc62c55139b9efeae00918bf75a3b08 90 PIRSF PIRSF029827 1 90 1.9E-43 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL549_RS08990 9e989601cd571fa110a788009c79931a 295 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 11 272 31.397 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AL549_RS08990 9e989601cd571fa110a788009c79931a 295 SUPERFAMILY SSF55060 167 282 1.34E-34 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AL549_RS08990 9e989601cd571fa110a788009c79931a 295 Pfam PF00288 GHMP kinases N terminal domain 94 150 1.8E-7 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AL549_RS08990 9e989601cd571fa110a788009c79931a 295 SUPERFAMILY SSF54211 11 164 2.35E-45 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS08990 9e989601cd571fa110a788009c79931a 295 PIRSF PIRSF010376 9 285 2.8E-86 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AL549_RS08990 9e989601cd571fa110a788009c79931a 295 Gene3D G3DSA:3.30.230.10 11 166 4.1E-43 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL549_RS08990 9e989601cd571fa110a788009c79931a 295 Pfam PF08544 GHMP kinases C terminal 211 264 4.0E-5 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AL549_RS08990 9e989601cd571fa110a788009c79931a 295 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 11 284 2.3E-97 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AL549_RS08990 9e989601cd571fa110a788009c79931a 295 Gene3D G3DSA:3.30.70.890 167 285 4.9E-24 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AL549_RS09155 1a0657c02b7dc05812b710f6dbe9875a 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 136 3.1E-12 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL549_RS09155 1a0657c02b7dc05812b710f6dbe9875a 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 1.9E-51 T 28-03-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AL549_RS09155 1a0657c02b7dc05812b710f6dbe9875a 138 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL549_RS09155 1a0657c02b7dc05812b710f6dbe9875a 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AL549_RS15810 0f7f2c132082b9d3d5027d30038e30d3 332 Pfam PF00535 Glycosyl transferase family 2 8 122 1.1E-14 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL549_RS15810 0f7f2c132082b9d3d5027d30038e30d3 332 Gene3D G3DSA:3.90.550.10 2 247 1.7E-34 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS15810 0f7f2c132082b9d3d5027d30038e30d3 332 SUPERFAMILY SSF53448 3 216 1.13E-37 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS10845 854b4319ba2245be50916f078978f392 88 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 86 19.208 T 28-03-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 AL549_RS10845 854b4319ba2245be50916f078978f392 88 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 85 3.5E-18 T 28-03-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AL549_RS08200 85cf79c51991ea7a4105c87d2a1d32a0 315 SUPERFAMILY SSF82866 74 293 3.92E-41 T 28-03-2018 AL549_RS08200 85cf79c51991ea7a4105c87d2a1d32a0 315 Pfam PF02355 Protein export membrane protein 111 292 8.3E-72 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL549_RS08200 85cf79c51991ea7a4105c87d2a1d32a0 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 9.2E-88 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AL549_RS08200 85cf79c51991ea7a4105c87d2a1d32a0 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.9E-32 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL549_RS08200 85cf79c51991ea7a4105c87d2a1d32a0 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.9E-32 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL549_RS08200 85cf79c51991ea7a4105c87d2a1d32a0 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.9E-32 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL549_RS08200 85cf79c51991ea7a4105c87d2a1d32a0 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.9E-32 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL549_RS08200 85cf79c51991ea7a4105c87d2a1d32a0 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 29.224 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AL549_RS08200 85cf79c51991ea7a4105c87d2a1d32a0 315 Pfam PF07549 SecD/SecF GG Motif 35 60 7.3E-11 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL549_RS08200 85cf79c51991ea7a4105c87d2a1d32a0 315 Gene3D G3DSA:1.20.1640.10 62 299 1.3E-32 T 28-03-2018 AL549_RS08200 85cf79c51991ea7a4105c87d2a1d32a0 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 117 282 6.8E-57 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL549_RS03950 2834f9354aa532a6eeef0e105be01cb8 152 Gene3D G3DSA:3.40.190.10 30 146 1.3E-6 T 28-03-2018 AL549_RS03950 2834f9354aa532a6eeef0e105be01cb8 152 SUPERFAMILY SSF53850 31 141 2.5E-6 T 28-03-2018 AL549_RS04340 c8a61dafddc7254fc4e2005db2787496 287 SUPERFAMILY SSF53697 95 264 2.04E-35 T 28-03-2018 AL549_RS04340 c8a61dafddc7254fc4e2005db2787496 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 78 1.3E-15 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL549_RS04340 c8a61dafddc7254fc4e2005db2787496 287 SUPERFAMILY SSF46689 5 79 5.29E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS04340 c8a61dafddc7254fc4e2005db2787496 287 Gene3D G3DSA:1.10.10.10 1 81 3.9E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS04340 c8a61dafddc7254fc4e2005db2787496 287 Pfam PF01380 SIS domain 124 250 6.0E-15 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL549_RS04340 c8a61dafddc7254fc4e2005db2787496 287 Gene3D G3DSA:3.40.50.10490 91 279 4.2E-33 T 28-03-2018 AL549_RS22615 9bd5b5726f8b7a186754ba9586f92afe 405 Gene3D G3DSA:1.25.40.10 155 233 9.9E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS22615 9bd5b5726f8b7a186754ba9586f92afe 405 SUPERFAMILY SSF48452 72 247 3.15E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS22615 9bd5b5726f8b7a186754ba9586f92afe 405 Gene3D G3DSA:1.25.40.10 234 308 1.3E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS22615 9bd5b5726f8b7a186754ba9586f92afe 405 Gene3D G3DSA:1.25.40.10 309 392 0.0013 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS22615 9bd5b5726f8b7a186754ba9586f92afe 405 Pfam PF13181 Tetratricopeptide repeat 149 180 0.0083 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS22615 9bd5b5726f8b7a186754ba9586f92afe 405 SMART SM00028 149 182 0.37 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS22615 9bd5b5726f8b7a186754ba9586f92afe 405 SMART SM00028 72 105 26.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS22615 9bd5b5726f8b7a186754ba9586f92afe 405 SMART SM00028 292 322 89.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS22615 9bd5b5726f8b7a186754ba9586f92afe 405 SMART SM00028 358 391 190.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS22615 9bd5b5726f8b7a186754ba9586f92afe 405 Gene3D G3DSA:1.25.40.10 37 154 1.0E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS22615 9bd5b5726f8b7a186754ba9586f92afe 405 SUPERFAMILY SSF48452 213 386 1.25E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS22485 8bc5a9ddfd7368e428e6fa5129c64ad2 499 SUPERFAMILY SSF52540 106 496 1.4E-108 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS22485 8bc5a9ddfd7368e428e6fa5129c64ad2 499 SMART SM00382 252 375 2.9E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS22485 8bc5a9ddfd7368e428e6fa5129c64ad2 499 Pfam PF00437 Type II/IV secretion system protein 126 391 4.4E-91 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL549_RS22485 8bc5a9ddfd7368e428e6fa5129c64ad2 499 Gene3D G3DSA:3.30.450.90 67 224 1.9E-48 T 28-03-2018 AL549_RS22485 8bc5a9ddfd7368e428e6fa5129c64ad2 499 SUPERFAMILY SSF160246 12 78 9.94E-17 T 28-03-2018 AL549_RS22485 8bc5a9ddfd7368e428e6fa5129c64ad2 499 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 319 333 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL549_RS22485 8bc5a9ddfd7368e428e6fa5129c64ad2 499 Gene3D G3DSA:3.40.50.300 225 499 5.5E-70 T 28-03-2018 AL549_RS22485 8bc5a9ddfd7368e428e6fa5129c64ad2 499 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 12 496 8.9E-229 T 28-03-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 AL549_RS08440 ff87526c9298f92d330930bbe1a4291e 117 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 25.694 T 28-03-2018 IPR005346 RnfH protein AL549_RS08440 ff87526c9298f92d330930bbe1a4291e 117 Pfam PF03658 RnfH family Ubiquitin 8 90 4.0E-34 T 28-03-2018 IPR005346 RnfH protein AL549_RS08440 ff87526c9298f92d330930bbe1a4291e 117 SUPERFAMILY SSF54285 6 82 2.05E-26 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AL549_RS08440 ff87526c9298f92d330930bbe1a4291e 117 Gene3D G3DSA:3.10.20.280 2 91 1.7E-34 T 28-03-2018 IPR005346 RnfH protein AL549_RS07785 3c861d0dfff227a4a2d2d8580a4d4332 305 Gene3D G3DSA:1.10.150.130 13 119 5.2E-22 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AL549_RS07785 3c861d0dfff227a4a2d2d8580a4d4332 305 Pfam PF00589 Phage integrase family 120 291 8.7E-53 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL549_RS07785 3c861d0dfff227a4a2d2d8580a4d4332 305 SUPERFAMILY SSF56349 113 303 2.21E-57 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL549_RS07785 3c861d0dfff227a4a2d2d8580a4d4332 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 305 61.19 T 28-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AL549_RS07785 3c861d0dfff227a4a2d2d8580a4d4332 305 Gene3D G3DSA:1.10.443.10 120 299 5.1E-49 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL549_RS07785 3c861d0dfff227a4a2d2d8580a4d4332 305 SUPERFAMILY SSF47823 11 107 2.55E-34 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal AL549_RS07785 3c861d0dfff227a4a2d2d8580a4d4332 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 305 56.274 T 28-03-2018 IPR023009 Tyrosine recombinase XerC/XerD AL549_RS07785 3c861d0dfff227a4a2d2d8580a4d4332 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 16 305 5.1E-116 T 28-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AL549_RS07785 3c861d0dfff227a4a2d2d8580a4d4332 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 97 5.1E-19 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AL549_RS17715 2028626d0acc86571709fc854046902f 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.473 T 28-03-2018 IPR022892 Ribonuclease HI GO:0004523 AL549_RS17715 2028626d0acc86571709fc854046902f 155 Pfam PF00075 RNase H 3 141 2.1E-53 T 28-03-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AL549_RS17715 2028626d0acc86571709fc854046902f 155 Gene3D G3DSA:3.30.420.10 1 153 1.3E-51 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS17715 2028626d0acc86571709fc854046902f 155 SUPERFAMILY SSF53098 3 143 1.21E-57 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS14640 e161afd13781f0fc661597f6581a6c97 198 SUPERFAMILY SSF52317 1 173 5.73E-20 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS14640 e161afd13781f0fc661597f6581a6c97 198 Pfam PF01965 DJ-1/PfpI family 3 155 2.8E-8 T 28-03-2018 IPR002818 DJ-1/PfpI AL549_RS14640 e161afd13781f0fc661597f6581a6c97 198 Gene3D G3DSA:3.40.50.880 1 189 1.6E-20 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS22725 0bdf12072d793ebaeb1936c9a24eae69 401 Gene3D G3DSA:3.40.50.1950 1 184 3.7E-56 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL549_RS22725 0bdf12072d793ebaeb1936c9a24eae69 401 SUPERFAMILY SSF52507 1 182 1.27E-61 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL549_RS22725 0bdf12072d793ebaeb1936c9a24eae69 401 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 2.0E-152 T 28-03-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 AL549_RS22725 0bdf12072d793ebaeb1936c9a24eae69 401 SUPERFAMILY SSF102645 184 399 2.62E-81 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AL549_RS22725 0bdf12072d793ebaeb1936c9a24eae69 401 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 370 6.6E-77 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AL549_RS22725 0bdf12072d793ebaeb1936c9a24eae69 401 Gene3D G3DSA:3.40.50.10300 185 401 1.6E-71 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AL549_RS22725 0bdf12072d793ebaeb1936c9a24eae69 401 Pfam PF02441 Flavoprotein 7 179 9.0E-45 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL549_RS03465 09861b72745271ad1ac6eae45404d50f 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.2E-49 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS03465 09861b72745271ad1ac6eae45404d50f 168 SUPERFAMILY SSF56420 2 165 3.01E-57 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS03465 09861b72745271ad1ac6eae45404d50f 168 Gene3D G3DSA:3.90.45.10 4 168 3.7E-55 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS03465 09861b72745271ad1ac6eae45404d50f 168 PIRSF PIRSF004749 1 168 6.1E-53 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS03465 09861b72745271ad1ac6eae45404d50f 168 PRINTS PR01576 Peptide deformylase signature 33 62 1.2E-31 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS03465 09861b72745271ad1ac6eae45404d50f 168 PRINTS PR01576 Peptide deformylase signature 101 119 1.2E-31 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS03465 09861b72745271ad1ac6eae45404d50f 168 PRINTS PR01576 Peptide deformylase signature 89 100 1.2E-31 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS03465 09861b72745271ad1ac6eae45404d50f 168 PRINTS PR01576 Peptide deformylase signature 120 149 1.2E-31 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS03465 09861b72745271ad1ac6eae45404d50f 168 Hamap MF_00163 Peptide deformylase [def]. 2 162 29.876 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS03465 09861b72745271ad1ac6eae45404d50f 168 Pfam PF01327 Polypeptide deformylase 4 152 1.6E-47 T 28-03-2018 IPR023635 Peptide deformylase AL549_RS07765 e12637e21cd09e9dfee611fd8a06c316 408 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL549_RS07765 e12637e21cd09e9dfee611fd8a06c316 408 SUPERFAMILY SSF52540 76 358 2.47E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS07765 e12637e21cd09e9dfee611fd8a06c316 408 Gene3D G3DSA:3.40.50.300 229 386 4.4E-46 T 28-03-2018 AL549_RS07765 e12637e21cd09e9dfee611fd8a06c316 408 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 408 50.017 T 28-03-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 AL549_RS07765 e12637e21cd09e9dfee611fd8a06c316 408 Pfam PF00270 DEAD/DEAH box helicase 27 195 8.7E-46 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL549_RS07765 e12637e21cd09e9dfee611fd8a06c316 408 Pfam PF00271 Helicase conserved C-terminal domain 234 341 4.8E-32 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS07765 e12637e21cd09e9dfee611fd8a06c316 408 Gene3D G3DSA:3.40.50.300 1 228 2.0E-58 T 28-03-2018 AL549_RS07765 e12637e21cd09e9dfee611fd8a06c316 408 SMART SM00487 22 224 1.3E-56 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS07765 e12637e21cd09e9dfee611fd8a06c316 408 SMART SM00490 260 341 2.8E-31 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS01000 2c3c38af37b9e4d934a23d626ca54f34 304 SUPERFAMILY SSF53850 94 301 1.09E-39 T 28-03-2018 AL549_RS01000 2c3c38af37b9e4d934a23d626ca54f34 304 SUPERFAMILY SSF46785 10 117 7.91E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01000 2c3c38af37b9e4d934a23d626ca54f34 304 Pfam PF03466 LysR substrate binding domain 94 300 7.5E-41 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS01000 2c3c38af37b9e4d934a23d626ca54f34 304 Gene3D G3DSA:3.40.190.10 183 269 1.2E-28 T 28-03-2018 AL549_RS01000 2c3c38af37b9e4d934a23d626ca54f34 304 Gene3D G3DSA:1.10.10.10 9 93 2.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01000 2c3c38af37b9e4d934a23d626ca54f34 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 7.0E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01000 2c3c38af37b9e4d934a23d626ca54f34 304 Gene3D G3DSA:3.40.190.10 95 182 1.4E-13 T 28-03-2018 AL549_RS08075 e0b0cdf3ff7666562ac5749d6b266cfe 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 5.9E-113 T 28-03-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AL549_RS08075 e0b0cdf3ff7666562ac5749d6b266cfe 229 Pfam PF00072 Response regulator receiver domain 5 116 7.0E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS08075 e0b0cdf3ff7666562ac5749d6b266cfe 229 Gene3D G3DSA:1.10.10.10 124 229 5.3E-35 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS08075 e0b0cdf3ff7666562ac5749d6b266cfe 229 Gene3D G3DSA:3.40.50.2300 1 123 3.0E-37 T 28-03-2018 AL549_RS08075 e0b0cdf3ff7666562ac5749d6b266cfe 229 SMART SM00448 3 116 1.0E-45 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS08075 e0b0cdf3ff7666562ac5749d6b266cfe 229 SUPERFAMILY SSF52172 3 184 1.81E-43 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS08075 e0b0cdf3ff7666562ac5749d6b266cfe 229 SMART SM00862 150 225 2.4E-28 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS08075 e0b0cdf3ff7666562ac5749d6b266cfe 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.4E-28 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 Gene3D G3DSA:1.20.1640.10 800 1023 2.8E-44 T 28-03-2018 AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 SUPERFAMILY SSF82693 38 131 7.32E-18 T 28-03-2018 AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 Gene3D G3DSA:3.30.70.1430 557 664 4.7E-9 T 28-03-2018 AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 1.8E-157 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 SUPERFAMILY SSF82714 725 797 1.15E-8 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 SUPERFAMILY SSF82866 797 1022 2.49E-47 T 28-03-2018 AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 SUPERFAMILY SSF82693 136 175 6.02E-8 T 28-03-2018 AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 SUPERFAMILY SSF82693 262 317 6.02E-8 T 28-03-2018 AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 SUPERFAMILY SSF82714 177 259 2.09E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 Gene3D G3DSA:3.30.2090.10 715 799 1.0E-10 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 SUPERFAMILY SSF82866 286 480 4.71E-34 T 28-03-2018 AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 Gene3D G3DSA:3.30.70.1430 38 136 4.8E-16 T 28-03-2018 AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 Gene3D G3DSA:1.20.1640.10 275 495 4.7E-34 T 28-03-2018 AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 Gene3D G3DSA:3.30.2090.10 174 262 2.1E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 PRINTS PR00702 Acriflavin resistance protein family signature 324 347 1.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 PRINTS PR00702 Acriflavin resistance protein family signature 378 402 1.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 PRINTS PR00702 Acriflavin resistance protein family signature 431 454 1.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS01300 d11ce05c70d9caf9dfaefc285a568d59 1033 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 1.9E-277 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.3E-71 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.3E-71 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.3E-71 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.3E-71 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 3.3E-71 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.3E-71 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.3E-71 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.3E-71 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 3.3E-71 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 SUPERFAMILY SSF82693 40 134 6.28E-25 T 28-03-2018 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 SUPERFAMILY SSF82693 139 181 3.4E-19 T 28-03-2018 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 SUPERFAMILY SSF82693 268 324 3.4E-19 T 28-03-2018 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 SUPERFAMILY SSF82693 554 657 5.75E-17 T 28-03-2018 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 SUPERFAMILY SSF82714 183 266 1.83E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 Gene3D G3DSA:1.20.1640.10 790 1011 7.5E-44 T 28-03-2018 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 Gene3D G3DSA:1.20.1640.10 267 491 1.0E-42 T 28-03-2018 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 Gene3D G3DSA:3.30.70.1430 40 141 1.2E-27 T 28-03-2018 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 SUPERFAMILY SSF82866 794 1011 2.49E-49 T 28-03-2018 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 SUPERFAMILY SSF82866 290 489 4.45E-46 T 28-03-2018 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 Gene3D G3DSA:3.30.2090.10 703 789 8.2E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 Gene3D G3DSA:3.30.70.1430 556 655 3.7E-10 T 28-03-2018 AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 SUPERFAMILY SSF82714 704 788 7.06E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS09985 4911a174e1159b8d52389228195eb64c 1037 Gene3D G3DSA:3.30.2090.10 181 266 2.0E-15 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS01585 49eac10b3108c8d09c7092bc8b33ab21 469 Gene3D G3DSA:2.40.50.140 406 469 9.3E-23 T 28-03-2018 AL549_RS01585 49eac10b3108c8d09c7092bc8b33ab21 469 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 170 190 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AL549_RS01585 49eac10b3108c8d09c7092bc8b33ab21 469 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 34 466 63.384 T 28-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AL549_RS01585 49eac10b3108c8d09c7092bc8b33ab21 469 Pfam PF04055 Radical SAM superfamily 172 349 1.2E-29 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS01585 49eac10b3108c8d09c7092bc8b33ab21 469 SMART SM00729 166 391 1.0E-53 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL549_RS01585 49eac10b3108c8d09c7092bc8b33ab21 469 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 35 464 6.5E-186 T 28-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AL549_RS01585 49eac10b3108c8d09c7092bc8b33ab21 469 SUPERFAMILY SSF102114 145 396 1.44E-52 T 28-03-2018 AL549_RS01585 49eac10b3108c8d09c7092bc8b33ab21 469 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 35 464 1.3E-108 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AL549_RS01585 49eac10b3108c8d09c7092bc8b33ab21 469 Pfam PF00919 Uncharacterized protein family UPF0004 35 119 7.0E-22 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AL549_RS01585 49eac10b3108c8d09c7092bc8b33ab21 469 Gene3D G3DSA:3.80.30.20 163 405 2.2E-47 T 28-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe AL549_RS23180 a7e1c65688b12c11eba96fb883cdc2dc 130 SUPERFAMILY SSF56047 2 129 4.97E-44 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23180 a7e1c65688b12c11eba96fb883cdc2dc 130 Gene3D G3DSA:3.30.1490.10 74 129 1.5E-21 T 28-03-2018 AL549_RS23180 a7e1c65688b12c11eba96fb883cdc2dc 130 Gene3D G3DSA:3.30.1370.30 1 66 1.2E-22 T 28-03-2018 AL549_RS23180 a7e1c65688b12c11eba96fb883cdc2dc 130 Pfam PF00410 Ribosomal protein S8 5 129 7.4E-47 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23180 a7e1c65688b12c11eba96fb883cdc2dc 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23180 a7e1c65688b12c11eba96fb883cdc2dc 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.189 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 Gene3D G3DSA:3.50.50.60 442 521 7.1E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 Gene3D G3DSA:3.40.30.10 103 197 4.8E-7 T 28-03-2018 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 SUPERFAMILY SSF51905 204 516 4.34E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 354 378 3.2E-60 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 3.2E-60 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 317 325 3.2E-60 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 406 422 3.2E-60 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 480 498 3.2E-60 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 3.2E-60 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 339 351 3.2E-60 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 445 466 3.2E-60 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 3.2E-60 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 Gene3D G3DSA:3.50.50.60 198 337 8.9E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 Gene3D G3DSA:3.50.50.60 338 441 7.4E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 PIRSF PIRSF000238 1 522 1.8E-257 T 28-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 520 6.8E-255 T 28-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 Gene3D G3DSA:3.40.30.10 1 94 4.0E-26 T 28-03-2018 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 506 1.1E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 SUPERFAMILY SSF52833 104 197 4.09E-23 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 346 366 - T 28-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 SUPERFAMILY SSF52833 1 101 5.26E-28 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 Pfam PF13192 Thioredoxin domain 120 195 3.9E-11 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 443 459 1.2E-34 T 28-03-2018 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 316 334 1.2E-34 T 28-03-2018 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 1.2E-34 T 28-03-2018 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 376 1.2E-34 T 28-03-2018 AL549_RS04785 2c08723731dc7e89ec9e13064e06714c 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 470 492 1.2E-34 T 28-03-2018 AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 324 906 1.1E-285 T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 SUPERFAMILY SSF50447 579 661 3.12E-24 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 SUPERFAMILY SSF52540 400 573 4.29E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 Pfam PF11987 Translation-initiation factor 2 691 796 9.7E-37 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 Gene3D G3DSA:2.40.30.10 807 905 3.5E-30 T 28-03-2018 AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 Gene3D G3DSA:3.30.56.50 333 374 1.6E-10 T 28-03-2018 AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 Gene3D G3DSA:3.30.56.50 4 45 1.5E-10 T 28-03-2018 AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 Gene3D G3DSA:2.40.30.10 570 671 5.4E-14 T 28-03-2018 AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 SUPERFAMILY SSF52156 684 813 1.83E-38 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 Gene3D G3DSA:3.40.50.300 403 569 1.2E-37 T 28-03-2018 AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 1.6E-15 T 28-03-2018 IPR013575 Initiation factor 2 associated domain, bacterial AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 SUPERFAMILY SSF46955 3 50 1.43E-12 T 28-03-2018 IPR009061 Putative DNA-binding domain AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 ProSitePatterns PS01176 Initiation factor 2 signature. 857 879 - T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 904 17.696 T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 331 381 4.0E-15 T 28-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.3E-8 T 28-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 410 565 8.8E-34 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 Pfam PF00009 Elongation factor Tu GTP binding domain 410 567 7.5E-33 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 SUPERFAMILY SSF50447 808 904 2.55E-34 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL549_RS18570 78475a5b222d5da41b37779ff21c5090 907 Gene3D G3DSA:3.40.50.10050 704 785 2.6E-26 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AL549_RS05915 85b204ea0c1135436342da4cdff0f3d2 157 Pfam PF06496 Protein of unknown function (DUF1097) 9 141 4.5E-39 T 28-03-2018 IPR009476 Protein of unknown function DUF1097 AL549_RS21200 315db0fadeb7a94d91df6791d4181ff5 197 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 16 196 1.2E-61 T 28-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AL549_RS21200 315db0fadeb7a94d91df6791d4181ff5 197 PIRSF PIRSF004553 18 197 5.8E-56 T 28-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AL549_RS21200 315db0fadeb7a94d91df6791d4181ff5 197 SUPERFAMILY SSF53335 19 195 5.08E-56 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS21200 315db0fadeb7a94d91df6791d4181ff5 197 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL549_RS21200 315db0fadeb7a94d91df6791d4181ff5 197 Pfam PF03602 Conserved hypothetical protein 95 19 195 9.5E-63 T 28-03-2018 AL549_RS21200 315db0fadeb7a94d91df6791d4181ff5 197 Gene3D G3DSA:3.40.50.150 4 197 3.0E-41 T 28-03-2018 AL549_RS01455 21405ebb8e3095a9d9be79b25b2619bc 414 Gene3D G3DSA:3.40.190.10 15 186 3.4E-32 T 28-03-2018 AL549_RS01455 21405ebb8e3095a9d9be79b25b2619bc 414 SUPERFAMILY SSF53850 23 409 1.14E-61 T 28-03-2018 AL549_RS01455 21405ebb8e3095a9d9be79b25b2619bc 414 Gene3D G3DSA:3.40.190.10 202 369 1.5E-12 T 28-03-2018 AL549_RS01455 21405ebb8e3095a9d9be79b25b2619bc 414 Pfam PF13416 Bacterial extracellular solute-binding protein 45 345 1.8E-39 T 28-03-2018 AL549_RS12455 75c77b4b397fe92964f7914fd695a0e7 547 Gene3D G3DSA:3.30.230.10 293 533 4.3E-29 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL549_RS12455 75c77b4b397fe92964f7914fd695a0e7 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 1.2E-10 T 28-03-2018 AL549_RS12455 75c77b4b397fe92964f7914fd695a0e7 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 1.2E-10 T 28-03-2018 AL549_RS12455 75c77b4b397fe92964f7914fd695a0e7 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 1.2E-10 T 28-03-2018 AL549_RS12455 75c77b4b397fe92964f7914fd695a0e7 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 1.2E-10 T 28-03-2018 AL549_RS12455 75c77b4b397fe92964f7914fd695a0e7 547 SUPERFAMILY SSF54211 314 506 1.02E-33 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS12455 75c77b4b397fe92964f7914fd695a0e7 547 Pfam PF13654 AAA domain 106 288 4.9E-20 T 28-03-2018 AL549_RS12455 75c77b4b397fe92964f7914fd695a0e7 547 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 506 2.8E-10 T 28-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AL549_RS21320 53dc64b050e1f907dedfda4d55638e89 276 Gene3D G3DSA:3.10.310.10 1 126 3.9E-49 T 28-03-2018 AL549_RS21320 53dc64b050e1f907dedfda4d55638e89 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.743 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL549_RS21320 53dc64b050e1f907dedfda4d55638e89 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 1.0E-101 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL549_RS21320 53dc64b050e1f907dedfda4d55638e89 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 28-03-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL549_RS21320 53dc64b050e1f907dedfda4d55638e89 276 Pfam PF01678 Diaminopimelate epimerase 154 269 1.4E-31 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL549_RS21320 53dc64b050e1f907dedfda4d55638e89 276 Pfam PF01678 Diaminopimelate epimerase 5 125 9.7E-33 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL549_RS21320 53dc64b050e1f907dedfda4d55638e89 276 SUPERFAMILY SSF54506 2 274 4.29E-53 T 28-03-2018 AL549_RS21320 53dc64b050e1f907dedfda4d55638e89 276 Gene3D G3DSA:3.10.310.10 127 263 7.0E-50 T 28-03-2018 AL549_RS03580 c0612e04008ebfac65e7a2370df639a9 302 SUPERFAMILY SSF53807 23 281 4.71E-60 T 28-03-2018 AL549_RS03580 c0612e04008ebfac65e7a2370df639a9 302 Gene3D G3DSA:3.40.50.1980 21 138 4.5E-27 T 28-03-2018 AL549_RS03580 c0612e04008ebfac65e7a2370df639a9 302 Gene3D G3DSA:3.40.50.1980 139 300 2.5E-27 T 28-03-2018 AL549_RS03580 c0612e04008ebfac65e7a2370df639a9 302 Pfam PF01497 Periplasmic binding protein 41 275 1.3E-23 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL549_RS20490 04ae93e77955ac0ce323422e58cc7883 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.9E-28 T 28-03-2018 IPR032305 GTP-binding protein, middle domain AL549_RS20490 04ae93e77955ac0ce323422e58cc7883 429 SUPERFAMILY SSF52540 197 371 1.46E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20490 04ae93e77955ac0ce323422e58cc7883 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.0E-155 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 AL549_RS20490 04ae93e77955ac0ce323422e58cc7883 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 5.5E-21 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS20490 04ae93e77955ac0ce323422e58cc7883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 4.6E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS20490 04ae93e77955ac0ce323422e58cc7883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 4.6E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS20490 04ae93e77955ac0ce323422e58cc7883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 4.6E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS20490 04ae93e77955ac0ce323422e58cc7883 429 Gene3D G3DSA:3.40.50.300 230 372 1.9E-19 T 28-03-2018 AL549_RS20490 04ae93e77955ac0ce323422e58cc7883 429 SUPERFAMILY SSF54980 365 428 3.88E-18 T 28-03-2018 IPR035647 EF-G domain III/V-like AL549_RS20490 04ae93e77955ac0ce323422e58cc7883 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.1E-30 T 28-03-2018 IPR025121 GTPase HflX, N-terminal AL549_RS20490 04ae93e77955ac0ce323422e58cc7883 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 45.871 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 AL549_RS20490 04ae93e77955ac0ce323422e58cc7883 429 Gene3D G3DSA:3.40.50.300 165 229 2.3E-11 T 28-03-2018 AL549_RS20490 04ae93e77955ac0ce323422e58cc7883 429 PIRSF PIRSF006809 3 423 1.4E-151 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 AL549_RS09190 8fcb54962b8f009770a13f95ee3430f3 306 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 2.7E-28 T 28-03-2018 AL549_RS09190 8fcb54962b8f009770a13f95ee3430f3 306 PRINTS PR01002 Flagellar protein FlgJ signature 221 242 2.7E-28 T 28-03-2018 AL549_RS09190 8fcb54962b8f009770a13f95ee3430f3 306 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 2.7E-28 T 28-03-2018 AL549_RS09190 8fcb54962b8f009770a13f95ee3430f3 306 PRINTS PR01002 Flagellar protein FlgJ signature 156 179 2.7E-28 T 28-03-2018 AL549_RS09190 8fcb54962b8f009770a13f95ee3430f3 306 PRINTS PR01002 Flagellar protein FlgJ signature 243 264 2.7E-28 T 28-03-2018 AL549_RS09190 8fcb54962b8f009770a13f95ee3430f3 306 PRINTS PR01002 Flagellar protein FlgJ signature 286 304 2.7E-28 T 28-03-2018 AL549_RS09190 8fcb54962b8f009770a13f95ee3430f3 306 PRINTS PR01002 Flagellar protein FlgJ signature 180 198 2.7E-28 T 28-03-2018 AL549_RS09190 8fcb54962b8f009770a13f95ee3430f3 306 Pfam PF10135 Rod binding protein 53 102 8.3E-14 T 28-03-2018 IPR019301 Flagellar protein FlgJ, N-terminal AL549_RS09190 8fcb54962b8f009770a13f95ee3430f3 306 Gene3D G3DSA:1.10.530.10 151 306 1.2E-34 T 28-03-2018 AL549_RS09190 8fcb54962b8f009770a13f95ee3430f3 306 SMART SM00047 146 305 1.0E-50 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AL549_RS09190 8fcb54962b8f009770a13f95ee3430f3 306 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 303 3.0E-111 T 28-03-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 AL549_RS09190 8fcb54962b8f009770a13f95ee3430f3 306 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 167 303 1.8E-21 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AL549_RS05605 58b88a54719b8f4fb7e82053396f566f 483 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 480 2.2E-153 T 28-03-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 AL549_RS05605 58b88a54719b8f4fb7e82053396f566f 483 Gene3D G3DSA:3.40.50.880 243 479 1.2E-22 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS05605 58b88a54719b8f4fb7e82053396f566f 483 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 483 195.888 T 28-03-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 AL549_RS05605 58b88a54719b8f4fb7e82053396f566f 483 Gene3D G3DSA:3.40.50.300 3 242 1.1E-52 T 28-03-2018 AL549_RS05605 58b88a54719b8f4fb7e82053396f566f 483 SUPERFAMILY SSF52540 7 241 8.86E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS05605 58b88a54719b8f4fb7e82053396f566f 483 SUPERFAMILY SSF52317 254 447 2.81E-40 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS05605 58b88a54719b8f4fb7e82053396f566f 483 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 233 6.1E-22 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AL549_RS05605 58b88a54719b8f4fb7e82053396f566f 483 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 438 2.8E-57 T 28-03-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 Gene3D G3DSA:2.40.50.140 54 154 6.3E-40 T 28-03-2018 AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 Gene3D G3DSA:3.50.40.10 195 395 2.6E-73 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 Gene3D G3DSA:3.30.70.380 698 794 7.4E-25 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 Pfam PF03483 B3/4 domain 212 385 1.9E-70 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 SUPERFAMILY SSF50249 38 197 2.94E-46 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 Gene3D G3DSA:3.30.56.10 1 53 2.7E-12 T 28-03-2018 AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 SMART SM00896 701 794 3.5E-45 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 46.254 T 28-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 Gene3D G3DSA:3.30.56.10 402 475 5.2E-24 T 28-03-2018 AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 SUPERFAMILY SSF56037 195 394 1.62E-76 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.3E-28 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 3.0E-17 T 28-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 SUPERFAMILY SSF46955 403 475 1.37E-19 T 28-03-2018 IPR009061 Putative DNA-binding domain AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 Gene3D G3DSA:3.30.930.10 489 690 9.2E-40 T 28-03-2018 AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 SMART SM00874 403 471 1.7E-28 T 28-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 Pfam PF01588 Putative tRNA binding domain 45 145 1.7E-25 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 SUPERFAMILY SSF55681 467 689 2.78E-54 T 28-03-2018 AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 SUPERFAMILY SSF54991 697 794 6.54E-30 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 SMART SM00873 212 385 3.2E-99 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AL549_RS15470 fece2c0fa1dd95e7b7e2f3f2b085dc66 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 6.9E-277 T 28-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AL549_RS02865 496d82c3c7fbefa3acb850a331ce0c7f 578 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 388 544 1.7E-41 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS02865 496d82c3c7fbefa3acb850a331ce0c7f 578 SMART SM00283 316 577 1.8E-59 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS02865 496d82c3c7fbefa3acb850a331ce0c7f 578 Gene3D G3DSA:1.10.287.950 344 541 4.0E-47 T 28-03-2018 AL549_RS02865 496d82c3c7fbefa3acb850a331ce0c7f 578 SMART SM00304 304 354 76.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS02865 496d82c3c7fbefa3acb850a331ce0c7f 578 SMART SM00304 248 301 0.0037 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS02865 496d82c3c7fbefa3acb850a331ce0c7f 578 Gene3D G3DSA:1.10.287.950 133 343 0.18 T 28-03-2018 AL549_RS02865 496d82c3c7fbefa3acb850a331ce0c7f 578 SUPERFAMILY SSF58104 269 577 6.28E-67 T 28-03-2018 AL549_RS02865 496d82c3c7fbefa3acb850a331ce0c7f 578 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 16 41 3.7E-21 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS02865 496d82c3c7fbefa3acb850a331ce0c7f 578 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 443 472 3.7E-21 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS02865 496d82c3c7fbefa3acb850a331ce0c7f 578 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 414 441 3.7E-21 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS00445 334aea044ab1b1a16482d92521c47142 451 SMART SM00267 292 450 5.7E-39 T 28-03-2018 IPR000160 GGDEF domain AL549_RS00445 334aea044ab1b1a16482d92521c47142 451 Gene3D G3DSA:3.30.450.20 39 206 4.2E-5 T 28-03-2018 AL549_RS00445 334aea044ab1b1a16482d92521c47142 451 Gene3D G3DSA:3.30.70.270 284 451 5.7E-42 T 28-03-2018 AL549_RS00445 334aea044ab1b1a16482d92521c47142 451 SUPERFAMILY SSF55073 308 451 5.18E-35 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS00445 334aea044ab1b1a16482d92521c47142 451 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 303 451 5.5E-37 T 28-03-2018 IPR000160 GGDEF domain AL549_RS00445 334aea044ab1b1a16482d92521c47142 451 Pfam PF00990 Diguanylate cyclase, GGDEF domain 305 451 5.8E-37 T 28-03-2018 IPR000160 GGDEF domain AL549_RS02925 3e09613349b2a1910bcb04d29b14221c 432 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 53 61 2.5E-8 T 28-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AL549_RS02925 3e09613349b2a1910bcb04d29b14221c 432 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 140 154 2.5E-8 T 28-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AL549_RS02925 3e09613349b2a1910bcb04d29b14221c 432 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 83 94 2.5E-8 T 28-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AL549_RS02925 3e09613349b2a1910bcb04d29b14221c 432 SUPERFAMILY SSF53474 33 170 1.34E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS02925 3e09613349b2a1910bcb04d29b14221c 432 SUPERFAMILY SSF53474 263 421 1.34E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS02925 3e09613349b2a1910bcb04d29b14221c 432 Gene3D G3DSA:3.40.50.1820 29 423 9.3E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS02925 3e09613349b2a1910bcb04d29b14221c 432 Pfam PF00561 alpha/beta hydrolase fold 51 224 7.0E-21 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS12065 a7d75c8f4d28c6a1f4f8bc8d10528eb3 90 SUPERFAMILY SSF54975 5 89 3.49E-27 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL549_RS12065 a7d75c8f4d28c6a1f4f8bc8d10528eb3 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 28-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL549_RS12065 a7d75c8f4d28c6a1f4f8bc8d10528eb3 90 Gene3D G3DSA:3.30.70.100 1 90 1.1E-27 T 28-03-2018 AL549_RS12065 a7d75c8f4d28c6a1f4f8bc8d10528eb3 90 Pfam PF00708 Acylphosphatase 7 89 2.1E-24 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL549_RS12065 a7d75c8f4d28c6a1f4f8bc8d10528eb3 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 28-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL549_RS15025 c90dde9af12a7b7b41253ec6bb926561 135 SUPERFAMILY SSF55811 9 134 2.3E-22 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL549_RS15025 c90dde9af12a7b7b41253ec6bb926561 135 PRINTS PR00502 NUDIX hydrolase family signature 48 63 3.1E-6 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL549_RS15025 c90dde9af12a7b7b41253ec6bb926561 135 PRINTS PR00502 NUDIX hydrolase family signature 34 48 3.1E-6 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL549_RS15025 c90dde9af12a7b7b41253ec6bb926561 135 Gene3D G3DSA:3.90.79.10 6 134 1.3E-18 T 28-03-2018 AL549_RS15025 c90dde9af12a7b7b41253ec6bb926561 135 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL549_RS15025 c90dde9af12a7b7b41253ec6bb926561 135 Pfam PF00293 NUDIX domain 10 115 4.3E-12 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL549_RS18020 08cdfd1567764b6cdaf28df3ab699489 255 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 5 252 35.565 T 28-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 AL549_RS18020 08cdfd1567764b6cdaf28df3ab699489 255 PIRSF PIRSF009437 1 255 1.3E-104 T 28-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 AL549_RS18020 08cdfd1567764b6cdaf28df3ab699489 255 Pfam PF04205 FMN-binding domain 142 237 1.4E-15 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL549_RS18020 08cdfd1567764b6cdaf28df3ab699489 255 SMART SM00900 142 240 1.0E-32 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL549_RS18020 08cdfd1567764b6cdaf28df3ab699489 255 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 4 248 6.2E-96 T 28-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 AL549_RS16200 228e759c4966f2dd84db3aa543ab48dd 515 SUPERFAMILY SSF55073 358 507 4.55E-36 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS16200 228e759c4966f2dd84db3aa543ab48dd 515 SMART SM00267 341 508 1.6E-34 T 28-03-2018 IPR000160 GGDEF domain AL549_RS16200 228e759c4966f2dd84db3aa543ab48dd 515 Pfam PF00990 Diguanylate cyclase, GGDEF domain 354 503 2.3E-33 T 28-03-2018 IPR000160 GGDEF domain AL549_RS16200 228e759c4966f2dd84db3aa543ab48dd 515 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 351 507 7.0E-40 T 28-03-2018 IPR000160 GGDEF domain AL549_RS16200 228e759c4966f2dd84db3aa543ab48dd 515 Gene3D G3DSA:3.30.70.270 343 509 5.6E-43 T 28-03-2018 AL549_RS16200 228e759c4966f2dd84db3aa543ab48dd 515 Gene3D G3DSA:3.30.450.20 156 268 0.0026 T 28-03-2018 AL549_RS04280 c7108579128e74ecbb18c67e31fed104 509 SMART SM00487 20 221 4.1E-63 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS04280 c7108579128e74ecbb18c67e31fed104 509 Pfam PF00271 Helicase conserved C-terminal domain 230 338 8.7E-27 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS04280 c7108579128e74ecbb18c67e31fed104 509 SMART SM00490 257 338 3.8E-31 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS04280 c7108579128e74ecbb18c67e31fed104 509 Pfam PF00270 DEAD/DEAH box helicase 26 194 3.7E-47 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL549_RS04280 c7108579128e74ecbb18c67e31fed104 509 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL549_RS04280 c7108579128e74ecbb18c67e31fed104 509 Gene3D G3DSA:3.40.50.300 225 472 2.7E-46 T 28-03-2018 AL549_RS04280 c7108579128e74ecbb18c67e31fed104 509 Gene3D G3DSA:3.40.50.300 1 224 2.7E-60 T 28-03-2018 AL549_RS04280 c7108579128e74ecbb18c67e31fed104 509 SUPERFAMILY SSF52540 73 359 3.26E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS04280 c7108579128e74ecbb18c67e31fed104 509 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 507 50.962 T 28-03-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 AL549_RS18465 c55e6a8cb7fcce7f2846a0f42f9ee192 529 SUPERFAMILY SSF50447 262 393 3.77E-27 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL549_RS18465 c55e6a8cb7fcce7f2846a0f42f9ee192 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 163 1.9E-19 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL549_RS18465 c55e6a8cb7fcce7f2846a0f42f9ee192 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 7.6E-47 T 28-03-2018 IPR032090 Peptide chain release factor 3, C-terminal AL549_RS18465 c55e6a8cb7fcce7f2846a0f42f9ee192 529 SUPERFAMILY SSF52540 10 277 1.5E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18465 c55e6a8cb7fcce7f2846a0f42f9ee192 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AL549_RS18465 c55e6a8cb7fcce7f2846a0f42f9ee192 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 8.5E-8 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL549_RS18465 c55e6a8cb7fcce7f2846a0f42f9ee192 529 Gene3D G3DSA:3.30.70.870 395 469 1.8E-10 T 28-03-2018 AL549_RS18465 c55e6a8cb7fcce7f2846a0f42f9ee192 529 SUPERFAMILY SSF54980 393 468 3.6E-17 T 28-03-2018 IPR035647 EF-G domain III/V-like AL549_RS18465 c55e6a8cb7fcce7f2846a0f42f9ee192 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.032 T 28-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AL549_RS18465 c55e6a8cb7fcce7f2846a0f42f9ee192 529 Gene3D G3DSA:3.40.50.300 8 284 2.6E-36 T 28-03-2018 AL549_RS18465 c55e6a8cb7fcce7f2846a0f42f9ee192 529 Gene3D G3DSA:2.40.30.10 293 394 1.8E-17 T 28-03-2018 AL549_RS18465 c55e6a8cb7fcce7f2846a0f42f9ee192 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 1.8E-303 T 28-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AL549_RS18465 c55e6a8cb7fcce7f2846a0f42f9ee192 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 3.7E-46 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS18465 c55e6a8cb7fcce7f2846a0f42f9ee192 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS18465 c55e6a8cb7fcce7f2846a0f42f9ee192 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS18465 c55e6a8cb7fcce7f2846a0f42f9ee192 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS18465 c55e6a8cb7fcce7f2846a0f42f9ee192 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS16830 5e6b5c35fac8e7bfcba6e30a7373c740 749 SMART SM00849 505 687 3.7E-11 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS16830 5e6b5c35fac8e7bfcba6e30a7373c740 749 SUPERFAMILY SSF56281 496 729 2.44E-39 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS16830 5e6b5c35fac8e7bfcba6e30a7373c740 749 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 133 714 5.6E-115 T 28-03-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 AL549_RS16830 5e6b5c35fac8e7bfcba6e30a7373c740 749 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 405 3.0E-26 T 28-03-2018 IPR004477 ComEC/Rec2-related protein AL549_RS16830 5e6b5c35fac8e7bfcba6e30a7373c740 749 Gene3D G3DSA:3.60.15.10 487 729 2.3E-21 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS16830 5e6b5c35fac8e7bfcba6e30a7373c740 749 Pfam PF03772 Competence protein 208 467 9.6E-51 T 28-03-2018 IPR004477 ComEC/Rec2-related protein AL549_RS16830 5e6b5c35fac8e7bfcba6e30a7373c740 749 Pfam PF00753 Metallo-beta-lactamase superfamily 503 682 3.9E-12 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS16830 5e6b5c35fac8e7bfcba6e30a7373c740 749 Pfam PF13567 Domain of unknown function (DUF4131) 27 173 1.0E-8 T 28-03-2018 IPR025405 Domain of unknown function DUF4131 AL549_RS05330 89820c5a707bcbfb2fec27de565fa3e7 654 SUPERFAMILY SSF55073 496 648 1.96E-31 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS05330 89820c5a707bcbfb2fec27de565fa3e7 654 Pfam PF00990 Diguanylate cyclase, GGDEF domain 492 646 5.2E-32 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05330 89820c5a707bcbfb2fec27de565fa3e7 654 Gene3D G3DSA:1.25.40.10 118 233 5.1E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS05330 89820c5a707bcbfb2fec27de565fa3e7 654 Gene3D G3DSA:1.25.40.10 302 460 2.1E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS05330 89820c5a707bcbfb2fec27de565fa3e7 654 SUPERFAMILY SSF48452 179 302 1.55E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS05330 89820c5a707bcbfb2fec27de565fa3e7 654 Pfam PF13181 Tetratricopeptide repeat 264 290 0.021 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS05330 89820c5a707bcbfb2fec27de565fa3e7 654 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 487 648 3.6E-32 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05330 89820c5a707bcbfb2fec27de565fa3e7 654 SUPERFAMILY SSF48452 263 442 4.74E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS05330 89820c5a707bcbfb2fec27de565fa3e7 654 Gene3D G3DSA:1.25.40.10 234 301 2.6E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS05330 89820c5a707bcbfb2fec27de565fa3e7 654 Pfam PF13424 Tetratricopeptide repeat 183 250 4.3E-8 T 28-03-2018 AL549_RS05330 89820c5a707bcbfb2fec27de565fa3e7 654 SMART SM00267 480 650 1.8E-33 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05330 89820c5a707bcbfb2fec27de565fa3e7 654 SMART SM00028 219 252 0.0095 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS05330 89820c5a707bcbfb2fec27de565fa3e7 654 SMART SM00028 261 294 1.2 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS05330 89820c5a707bcbfb2fec27de565fa3e7 654 SMART SM00028 179 212 54.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS05330 89820c5a707bcbfb2fec27de565fa3e7 654 SMART SM00028 381 414 56.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS05330 89820c5a707bcbfb2fec27de565fa3e7 654 SMART SM00028 301 334 150.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS05330 89820c5a707bcbfb2fec27de565fa3e7 654 Gene3D G3DSA:3.30.70.270 485 652 2.5E-37 T 28-03-2018 AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 SMART SM00089 600 690 3.0E-7 T 28-03-2018 IPR022409 PKD/Chitinase domain AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 SMART SM00089 700 786 0.15 T 28-03-2018 IPR022409 PKD/Chitinase domain AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 SMART SM00089 51 134 3.8 T 28-03-2018 IPR022409 PKD/Chitinase domain AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 SUPERFAMILY SSF51445 135 461 5.69E-90 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 SUPERFAMILY SSF51445 548 588 5.69E-90 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 Gene3D G3DSA:3.40.1850.10 605 698 4.8E-21 T 28-03-2018 AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 SMART SM00636 159 575 2.0E-162 T 28-03-2018 IPR011583 Chitinase II GO:0008061 AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 SUPERFAMILY SSF49299 596 688 1.69E-8 T 28-03-2018 IPR000601 PKD domain AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 Pfam PF08329 Chitinase A, N-terminal domain 21 156 6.9E-56 T 28-03-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 Gene3D G3DSA:2.60.40.10 21 131 3.8E-20 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 Gene3D G3DSA:2.60.40.10 699 785 1.4E-15 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 Gene3D G3DSA:3.20.20.80 133 604 2.5E-89 T 28-03-2018 AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 Gene3D G3DSA:2.10.10.20 793 837 1.1E-15 T 28-03-2018 AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 ProSitePatterns PS01095 Chitinases family 18 active site. 307 315 - T 28-03-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 SMART SM00495 794 839 4.4E-14 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 Pfam PF00704 Glycosyl hydrolases family 18 161 575 5.1E-88 T 28-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 SUPERFAMILY SSF51055 783 841 1.22E-14 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 SUPERFAMILY SSF54556 461 546 2.33E-17 T 28-03-2018 IPR029070 Chitinase insertion domain AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 SUPERFAMILY SSF49299 696 783 7.85E-5 T 28-03-2018 IPR000601 PKD domain AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 Pfam PF02010 REJ domain 604 738 2.8E-6 T 28-03-2018 IPR002859 PKD/REJ-like domain AL549_RS01740 0d45dbb20bf604763a8c96b813409ca7 845 SUPERFAMILY SSF81296 21 133 1.68E-32 T 28-03-2018 IPR014756 Immunoglobulin E-set AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 SUPERFAMILY SSF158472 175 221 1.12E-5 T 28-03-2018 AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 SMART SM00304 172 224 2.4E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 Pfam PF01627 Hpt domain 665 747 1.9E-8 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 SUPERFAMILY SSF55874 293 462 9.82E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 SUPERFAMILY SSF47226 640 753 2.36E-19 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 Gene3D G3DSA:1.20.120.160 637 754 1.5E-14 T 28-03-2018 AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 SMART SM00388 239 304 8.2E-22 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 Gene3D G3DSA:3.30.565.10 309 475 1.1E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 SMART SM00448 490 605 2.7E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 SMART SM00387 351 466 2.2E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 SUPERFAMILY SSF47384 223 304 3.34E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 6.9E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 6.9E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 463 6.9E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 444 6.9E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 Gene3D G3DSA:1.10.287.130 229 300 2.1E-18 T 28-03-2018 AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 Gene3D G3DSA:3.40.50.2300 484 636 7.1E-39 T 28-03-2018 AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 463 7.7E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 Pfam PF00072 Response regulator receiver domain 492 605 2.4E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 303 6.3E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS12295 f69caa3bc1b071642321d198dbf3b069 762 SUPERFAMILY SSF52172 487 610 7.97E-37 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS17810 48953e6d000a910d6c27da5acfa0a6e7 402 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 2.3E-37 T 28-03-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL549_RS17810 48953e6d000a910d6c27da5acfa0a6e7 402 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 1.4E-46 T 28-03-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL549_RS17810 48953e6d000a910d6c27da5acfa0a6e7 402 SUPERFAMILY SSF55347 126 274 7.19E-63 T 28-03-2018 AL549_RS17810 48953e6d000a910d6c27da5acfa0a6e7 402 Gene3D G3DSA:1.10.1740.10 312 400 4.1E-28 T 28-03-2018 AL549_RS17810 48953e6d000a910d6c27da5acfa0a6e7 402 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 397 7.3E-163 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL549_RS17810 48953e6d000a910d6c27da5acfa0a6e7 402 PIRSF PIRSF006205 1 402 1.6E-153 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL549_RS17810 48953e6d000a910d6c27da5acfa0a6e7 402 Gene3D G3DSA:3.40.50.720 1 150 8.9E-48 T 28-03-2018 AL549_RS17810 48953e6d000a910d6c27da5acfa0a6e7 402 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.807 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL549_RS17810 48953e6d000a910d6c27da5acfa0a6e7 402 SUPERFAMILY SSF69055 302 399 7.19E-30 T 28-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL549_RS17810 48953e6d000a910d6c27da5acfa0a6e7 402 SUPERFAMILY SSF51735 2 150 3.2E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS17810 48953e6d000a910d6c27da5acfa0a6e7 402 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 2.0E-39 T 28-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL549_RS18005 8338632259edc8db2aa6e332d7bc94ea 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.129 T 28-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AL549_RS18005 8338632259edc8db2aa6e332d7bc94ea 407 SUPERFAMILY SSF63380 105 272 1.7E-34 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL549_RS18005 8338632259edc8db2aa6e332d7bc94ea 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 9.3E-228 T 28-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AL549_RS18005 8338632259edc8db2aa6e332d7bc94ea 407 Gene3D G3DSA:3.40.50.80 257 401 1.4E-26 T 28-03-2018 AL549_RS18005 8338632259edc8db2aa6e332d7bc94ea 407 Pfam PF00970 Oxidoreductase FAD-binding domain 202 266 9.7E-9 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AL549_RS18005 8338632259edc8db2aa6e332d7bc94ea 407 SUPERFAMILY SSF52343 258 402 2.62E-35 T 28-03-2018 AL549_RS18005 8338632259edc8db2aa6e332d7bc94ea 407 SUPERFAMILY SSF54292 36 124 6.56E-22 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL549_RS18005 8338632259edc8db2aa6e332d7bc94ea 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 43 115 2.4E-10 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL549_RS18005 8338632259edc8db2aa6e332d7bc94ea 407 Gene3D G3DSA:3.10.20.30 29 136 4.7E-20 T 28-03-2018 IPR012675 Beta-grasp domain AL549_RS18005 8338632259edc8db2aa6e332d7bc94ea 407 PIRSF PIRSF000044 1 407 2.5E-217 T 28-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AL549_RS18005 8338632259edc8db2aa6e332d7bc94ea 407 Gene3D G3DSA:2.40.30.10 137 256 9.7E-31 T 28-03-2018 AL549_RS18005 8338632259edc8db2aa6e332d7bc94ea 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 2.8E-16 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL549_RS15590 9ef41e46ad7a7ff4d9caff817fd04d8e 314 Pfam PF00561 alpha/beta hydrolase fold 37 138 1.4E-15 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS15590 9ef41e46ad7a7ff4d9caff817fd04d8e 314 SUPERFAMILY SSF53474 32 310 2.92E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS15590 9ef41e46ad7a7ff4d9caff817fd04d8e 314 Gene3D G3DSA:3.40.50.1820 30 314 2.7E-39 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS21195 fc84372d37d7f69442923dbca83b6673 395 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 365 378 - T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL549_RS21195 fc84372d37d7f69442923dbca83b6673 395 SMART SM00382 190 370 2.5E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS21195 fc84372d37d7f69442923dbca83b6673 395 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 119 391 3.2E-116 T 28-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AL549_RS21195 fc84372d37d7f69442923dbca83b6673 395 Gene3D G3DSA:1.20.120.140 302 395 4.2E-20 T 28-03-2018 AL549_RS21195 fc84372d37d7f69442923dbca83b6673 395 SMART SM00963 96 176 2.0E-26 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL549_RS21195 fc84372d37d7f69442923dbca83b6673 395 Pfam PF02881 SRP54-type protein, helical bundle domain 111 172 7.6E-14 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL549_RS21195 fc84372d37d7f69442923dbca83b6673 395 SMART SM00962 191 392 1.1E-124 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL549_RS21195 fc84372d37d7f69442923dbca83b6673 395 Gene3D G3DSA:1.20.120.140 83 172 1.6E-24 T 28-03-2018 AL549_RS21195 fc84372d37d7f69442923dbca83b6673 395 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 119 392 65.184 T 28-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AL549_RS21195 fc84372d37d7f69442923dbca83b6673 395 Pfam PF00448 SRP54-type protein, GTPase domain 192 391 4.5E-78 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL549_RS21195 fc84372d37d7f69442923dbca83b6673 395 SUPERFAMILY SSF47364 91 170 1.07E-22 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL549_RS21195 fc84372d37d7f69442923dbca83b6673 395 SUPERFAMILY SSF52540 189 392 3.02E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS21195 fc84372d37d7f69442923dbca83b6673 395 Gene3D G3DSA:3.40.50.300 173 301 5.8E-24 T 28-03-2018 AL549_RS02830 c375e38d9ec083340506babd60ff84d8 458 SUPERFAMILY SSF52540 155 377 4.86E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS02830 c375e38d9ec083340506babd60ff84d8 458 Gene3D G3DSA:1.10.10.60 413 452 5.3E-8 T 28-03-2018 AL549_RS02830 c375e38d9ec083340506babd60ff84d8 458 SUPERFAMILY SSF46689 395 450 1.08E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS02830 c375e38d9ec083340506babd60ff84d8 458 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 241 256 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL549_RS02830 c375e38d9ec083340506babd60ff84d8 458 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL549_RS02830 c375e38d9ec083340506babd60ff84d8 458 Pfam PF02954 Bacterial regulatory protein, Fis family 409 448 7.5E-6 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS02830 c375e38d9ec083340506babd60ff84d8 458 SMART SM00448 14 125 5.3E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS02830 c375e38d9ec083340506babd60ff84d8 458 Gene3D G3DSA:1.10.8.60 324 412 3.4E-17 T 28-03-2018 AL549_RS02830 c375e38d9ec083340506babd60ff84d8 458 SMART SM00382 175 315 1.6E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS02830 c375e38d9ec083340506babd60ff84d8 458 Gene3D G3DSA:3.40.50.2300 10 148 6.1E-33 T 28-03-2018 AL549_RS02830 c375e38d9ec083340506babd60ff84d8 458 Gene3D G3DSA:3.40.50.300 149 323 1.6E-24 T 28-03-2018 AL549_RS02830 c375e38d9ec083340506babd60ff84d8 458 SUPERFAMILY SSF52172 14 198 1.31E-41 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS02830 c375e38d9ec083340506babd60ff84d8 458 Pfam PF00072 Response regulator receiver domain 16 125 2.6E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS02830 c375e38d9ec083340506babd60ff84d8 458 Pfam PF00158 Sigma-54 interaction domain 155 318 8.2E-65 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL549_RS02830 c375e38d9ec083340506babd60ff84d8 458 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 SUPERFAMILY SSF82693 136 182 3.31E-22 T 28-03-2018 AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 SUPERFAMILY SSF82693 270 325 3.31E-22 T 28-03-2018 AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 Gene3D G3DSA:1.20.1640.10 283 503 7.4E-35 T 28-03-2018 AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 SUPERFAMILY SSF82866 795 1015 5.1E-44 T 28-03-2018 AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 Gene3D G3DSA:3.30.2090.10 720 792 2.5E-10 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 Gene3D G3DSA:3.30.2090.10 181 270 3.9E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 SUPERFAMILY SSF82693 40 135 2.75E-20 T 28-03-2018 AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 Pfam PF00873 AcrB/AcrD/AcrF family 3 1011 1.3E-175 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 Gene3D G3DSA:3.30.70.1430 40 144 1.6E-29 T 28-03-2018 AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 Gene3D G3DSA:3.30.70.1430 557 719 3.3E-12 T 28-03-2018 AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 SUPERFAMILY SSF82714 184 266 3.4E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 SUPERFAMILY SSF82866 292 491 6.15E-38 T 28-03-2018 AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 Gene3D G3DSA:1.20.1640.10 808 1013 1.7E-36 T 28-03-2018 AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 SUPERFAMILY SSF82714 708 788 1.09E-9 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 4.7E-25 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 4.7E-25 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 4.7E-25 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 4.7E-25 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.7E-25 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS06090 a647e519f7d4aff88c8cec645b61c279 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.7E-25 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS07355 c72264e979908980ee858676ca83e5a2 505 Gene3D G3DSA:2.40.320.10 1 201 7.1E-40 T 28-03-2018 AL549_RS07355 c72264e979908980ee858676ca83e5a2 505 Pfam PF01928 CYTH domain 3 197 6.3E-34 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AL549_RS07355 c72264e979908980ee858676ca83e5a2 505 SUPERFAMILY SSF55154 1 214 9.16E-50 T 28-03-2018 IPR033469 CYTH-like domain Reactome: R-HSA-196819 AL549_RS07355 c72264e979908980ee858676ca83e5a2 505 SMART SM01118 2 203 3.7E-43 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AL549_RS07355 c72264e979908980ee858676ca83e5a2 505 Pfam PF05235 CHAD domain 231 433 1.7E-8 T 28-03-2018 IPR007899 CHAD domain AL549_RS07355 c72264e979908980ee858676ca83e5a2 505 SMART SM00880 229 497 4.8E-29 T 28-03-2018 IPR007899 CHAD domain AL549_RS12655 47a9db5d6a9197992a64d965ff17f2b5 552 Pfam PF00037 4Fe-4S binding domain 445 465 7.7E-5 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS12655 47a9db5d6a9197992a64d965ff17f2b5 552 Gene3D G3DSA:3.30.70.20 429 452 2.4E-9 T 28-03-2018 AL549_RS12655 47a9db5d6a9197992a64d965ff17f2b5 552 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 419 430 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS12655 47a9db5d6a9197992a64d965ff17f2b5 552 SUPERFAMILY SSF54862 149 237 3.42E-37 T 28-03-2018 AL549_RS12655 47a9db5d6a9197992a64d965ff17f2b5 552 SUPERFAMILY SSF54862 410 510 3.42E-37 T 28-03-2018 AL549_RS12655 47a9db5d6a9197992a64d965ff17f2b5 552 Pfam PF12838 4Fe-4S dicluster domain 184 230 1.1E-8 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS12655 47a9db5d6a9197992a64d965ff17f2b5 552 Gene3D G3DSA:3.30.70.20 453 498 1.0E-6 T 28-03-2018 AL549_RS12655 47a9db5d6a9197992a64d965ff17f2b5 552 Gene3D G3DSA:3.30.70.20 161 217 2.7E-11 T 28-03-2018 AL549_RS12655 47a9db5d6a9197992a64d965ff17f2b5 552 Gene3D G3DSA:3.30.70.20 218 428 2.3E-10 T 28-03-2018 AL549_RS12655 47a9db5d6a9197992a64d965ff17f2b5 552 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 450 461 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS14585 bfbf4916ed2f052a1904ad741ff8c83b 193 Pfam PF06940 Domain of unknown function (DUF1287) 26 191 2.9E-65 T 28-03-2018 IPR009706 Protein of unknown function DUF1287 AL549_RS14585 bfbf4916ed2f052a1904ad741ff8c83b 193 PIRSF PIRSF011444 6 193 1.2E-71 T 28-03-2018 IPR009706 Protein of unknown function DUF1287 AL549_RS14585 bfbf4916ed2f052a1904ad741ff8c83b 193 ProDom PD357862 YIJF PERIPLASMIC ECS4873 PRECURSOR CC1379 SIGNAL DOMAIN PM0035 18 191 5.0E-48 T 28-03-2018 IPR009706 Protein of unknown function DUF1287 AL549_RS14585 bfbf4916ed2f052a1904ad741ff8c83b 193 Gene3D G3DSA:3.90.1720.10 26 193 9.6E-6 T 28-03-2018 AL549_RS23250 9df70e406f446e75e603f1f108251a3c 206 Gene3D G3DSA:1.10.287.460 2 94 3.1E-19 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AL549_RS23250 9df70e406f446e75e603f1f108251a3c 206 SUPERFAMILY SSF54534 7 205 5.7E-54 T 28-03-2018 AL549_RS23250 9df70e406f446e75e603f1f108251a3c 206 Gene3D G3DSA:3.10.50.40 95 206 2.4E-39 T 28-03-2018 AL549_RS23250 9df70e406f446e75e603f1f108251a3c 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 203 4.5E-26 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL549_RS23250 9df70e406f446e75e603f1f108251a3c 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 3.8E-22 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AL549_RS19390 8316d03d12650647b032e2f7b9aac5e4 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.45 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AL549_RS19390 8316d03d12650647b032e2f7b9aac5e4 140 Gene3D G3DSA:3.30.420.140 1 139 4.8E-37 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AL549_RS19390 8316d03d12650647b032e2f7b9aac5e4 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 3.5E-49 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AL549_RS19390 8316d03d12650647b032e2f7b9aac5e4 140 SMART SM00732 3 104 5.9E-35 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AL549_RS19390 8316d03d12650647b032e2f7b9aac5e4 140 SUPERFAMILY SSF53098 3 136 3.19E-37 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS19390 8316d03d12650647b032e2f7b9aac5e4 140 Pfam PF03652 Holliday junction resolvase 4 136 4.7E-36 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AL549_RS04530 99652ac4e7f730acf42caebf5577703b 520 SUPERFAMILY SSF55785 20 114 2.97E-24 T 28-03-2018 IPR000014 PAS domain AL549_RS04530 99652ac4e7f730acf42caebf5577703b 520 Gene3D G3DSA:1.10.287.950 185 284 1.5E-4 T 28-03-2018 AL549_RS04530 99652ac4e7f730acf42caebf5577703b 520 Gene3D G3DSA:1.10.287.950 285 520 9.9E-41 T 28-03-2018 AL549_RS04530 99652ac4e7f730acf42caebf5577703b 520 SMART SM00283 257 518 3.7E-46 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS04530 99652ac4e7f730acf42caebf5577703b 520 Gene3D G3DSA:3.40.50.10600 5 125 4.1E-29 T 28-03-2018 AL549_RS04530 99652ac4e7f730acf42caebf5577703b 520 Pfam PF08447 PAS fold 31 114 5.0E-13 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 AL549_RS04530 99652ac4e7f730acf42caebf5577703b 520 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 110 4.7E-11 T 28-03-2018 IPR000014 PAS domain AL549_RS04530 99652ac4e7f730acf42caebf5577703b 520 SUPERFAMILY SSF58104 238 518 7.06E-59 T 28-03-2018 AL549_RS04530 99652ac4e7f730acf42caebf5577703b 520 SMART SM00091 8 75 0.0094 T 28-03-2018 IPR000014 PAS domain AL549_RS04530 99652ac4e7f730acf42caebf5577703b 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 482 4.9E-34 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS09110 de69bb3e83ffbe228f1e3a3338fd66ad 211 PIRSF PIRSF028688 1 211 2.5E-124 T 28-03-2018 IPR014549 Flagellar protein FlgO AL549_RS09110 de69bb3e83ffbe228f1e3a3338fd66ad 211 Gene3D G3DSA:3.40.50.10070 55 187 6.7E-12 T 28-03-2018 AL549_RS18790 5b02c3b70fa2c778b73f37cbc40614df 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL549_RS18790 5b02c3b70fa2c778b73f37cbc40614df 865 Gene3D G3DSA:3.30.499.10 683 865 2.9E-50 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS18790 5b02c3b70fa2c778b73f37cbc40614df 865 Gene3D G3DSA:3.20.19.10 162 363 4.0E-35 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL549_RS18790 5b02c3b70fa2c778b73f37cbc40614df 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.3E-65 T 28-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL549_RS18790 5b02c3b70fa2c778b73f37cbc40614df 865 SUPERFAMILY SSF74778 2 160 1.57E-67 T 28-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL549_RS18790 5b02c3b70fa2c778b73f37cbc40614df 865 Gene3D G3DSA:3.40.1060.10 521 682 3.0E-28 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS18790 5b02c3b70fa2c778b73f37cbc40614df 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.7E-99 T 28-03-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL549_RS18790 5b02c3b70fa2c778b73f37cbc40614df 865 PIRSF PIRSF036687 1 859 0.0 T 28-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL549_RS18790 5b02c3b70fa2c778b73f37cbc40614df 865 SUPERFAMILY SSF53732 379 860 1.26E-146 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS18790 5b02c3b70fa2c778b73f37cbc40614df 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 2.2E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS18790 5b02c3b70fa2c778b73f37cbc40614df 865 Gene3D G3DSA:3.30.499.10 402 520 1.1E-10 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS18790 5b02c3b70fa2c778b73f37cbc40614df 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL549_RS18790 5b02c3b70fa2c778b73f37cbc40614df 865 SUPERFAMILY SSF52016 162 372 4.12E-71 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL549_RS18790 5b02c3b70fa2c778b73f37cbc40614df 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 28-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL549_RS19620 1b730bbe14a904a68b4e94dc532ebad0 427 Pfam PF01522 Polysaccharide deacetylase 23 129 8.2E-14 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AL549_RS19620 1b730bbe14a904a68b4e94dc532ebad0 427 SUPERFAMILY SSF51055 383 426 2.94E-13 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS19620 1b730bbe14a904a68b4e94dc532ebad0 427 Gene3D G3DSA:2.10.10.20 384 426 4.4E-6 T 28-03-2018 AL549_RS19620 1b730bbe14a904a68b4e94dc532ebad0 427 Gene3D G3DSA:2.10.10.20 339 377 7.2E-9 T 28-03-2018 AL549_RS19620 1b730bbe14a904a68b4e94dc532ebad0 427 Gene3D G3DSA:3.20.20.370 15 338 1.1E-30 T 28-03-2018 AL549_RS19620 1b730bbe14a904a68b4e94dc532ebad0 427 SUPERFAMILY SSF88713 24 102 6.18E-27 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL549_RS19620 1b730bbe14a904a68b4e94dc532ebad0 427 SUPERFAMILY SSF88713 190 237 6.18E-27 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL549_RS19620 1b730bbe14a904a68b4e94dc532ebad0 427 SUPERFAMILY SSF88713 130 147 6.18E-27 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL549_RS19620 1b730bbe14a904a68b4e94dc532ebad0 427 SUPERFAMILY SSF88713 270 338 6.18E-27 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL549_RS19620 1b730bbe14a904a68b4e94dc532ebad0 427 SUPERFAMILY SSF51055 334 377 1.83E-13 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS19620 1b730bbe14a904a68b4e94dc532ebad0 427 SMART SM00495 332 378 7.7E-6 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS19620 1b730bbe14a904a68b4e94dc532ebad0 427 SMART SM00495 381 427 5.0 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS16715 4e415fc61a12aab8aeb748830c2c21d8 705 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 489 671 2.4E-40 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS16715 4e415fc61a12aab8aeb748830c2c21d8 705 Pfam PF00672 HAMP domain 376 425 1.7E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS16715 4e415fc61a12aab8aeb748830c2c21d8 705 Gene3D G3DSA:1.10.287.1060 372 461 0.047 T 28-03-2018 AL549_RS16715 4e415fc61a12aab8aeb748830c2c21d8 705 SUPERFAMILY SSF58104 396 705 8.24E-73 T 28-03-2018 AL549_RS16715 4e415fc61a12aab8aeb748830c2c21d8 705 Gene3D G3DSA:1.10.287.950 462 676 1.8E-46 T 28-03-2018 AL549_RS16715 4e415fc61a12aab8aeb748830c2c21d8 705 SMART SM00283 443 704 7.4E-63 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS16715 4e415fc61a12aab8aeb748830c2c21d8 705 Gene3D G3DSA:3.30.450.20 83 220 2.2E-10 T 28-03-2018 AL549_RS16715 4e415fc61a12aab8aeb748830c2c21d8 705 SMART SM00304 374 428 4.4E-13 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS16715 4e415fc61a12aab8aeb748830c2c21d8 705 Gene3D G3DSA:3.30.450.20 221 342 5.1E-13 T 28-03-2018 AL549_RS16715 4e415fc61a12aab8aeb748830c2c21d8 705 Pfam PF02743 Cache domain 50 324 2.7E-14 T 28-03-2018 IPR033479 Double Cache domain 1 AL549_RS23300 4bad2250fc4cba849228a2b1059a9a52 207 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.171 T 28-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AL549_RS23300 4bad2250fc4cba849228a2b1059a9a52 207 SUPERFAMILY SSF52540 25 198 6.13E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS23300 4bad2250fc4cba849228a2b1059a9a52 207 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 198 3.0E-83 T 28-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AL549_RS23300 4bad2250fc4cba849228a2b1059a9a52 207 Gene3D G3DSA:3.40.50.300 27 206 4.2E-51 T 28-03-2018 AL549_RS23300 4bad2250fc4cba849228a2b1059a9a52 207 Pfam PF01583 Adenylylsulphate kinase 31 182 7.0E-72 T 28-03-2018 AL549_RS22490 572fdc188365ca42648c9b69f02c00f3 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 4.8E-36 T 28-03-2018 IPR003004 GspF/PilC family AL549_RS22490 572fdc188365ca42648c9b69f02c00f3 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 4.8E-36 T 28-03-2018 IPR003004 GspF/PilC family AL549_RS22490 572fdc188365ca42648c9b69f02c00f3 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 4.8E-36 T 28-03-2018 IPR003004 GspF/PilC family AL549_RS22490 572fdc188365ca42648c9b69f02c00f3 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 4.8E-36 T 28-03-2018 IPR003004 GspF/PilC family AL549_RS22490 572fdc188365ca42648c9b69f02c00f3 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 165 193 - T 28-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AL549_RS22490 572fdc188365ca42648c9b69f02c00f3 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 2.7E-33 T 28-03-2018 IPR018076 Type II secretion system F domain AL549_RS22490 572fdc188365ca42648c9b69f02c00f3 405 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 2.5E-24 T 28-03-2018 IPR018076 Type II secretion system F domain AL549_RS22490 572fdc188365ca42648c9b69f02c00f3 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 402 1.4E-154 T 28-03-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 AL549_RS07810 85015549800db911e247b36d5efb51be 444 Gene3D G3DSA:3.40.50.300 141 311 8.9E-16 T 28-03-2018 AL549_RS07810 85015549800db911e247b36d5efb51be 444 Pfam PF00158 Sigma-54 interaction domain 146 305 8.7E-34 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL549_RS07810 85015549800db911e247b36d5efb51be 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL549_RS07810 85015549800db911e247b36d5efb51be 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 3.6E-5 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS07810 85015549800db911e247b36d5efb51be 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 3.6E-5 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS07810 85015549800db911e247b36d5efb51be 444 Gene3D G3DSA:1.10.10.60 384 443 2.8E-13 T 28-03-2018 AL549_RS07810 85015549800db911e247b36d5efb51be 444 SUPERFAMILY SSF46689 351 438 2.69E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS07810 85015549800db911e247b36d5efb51be 444 Gene3D G3DSA:1.10.8.60 312 383 1.4E-21 T 28-03-2018 AL549_RS07810 85015549800db911e247b36d5efb51be 444 SMART SM00382 166 303 0.0054 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS07810 85015549800db911e247b36d5efb51be 444 SUPERFAMILY SSF52540 146 379 7.07E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS07810 85015549800db911e247b36d5efb51be 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 5.7E-8 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS17790 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 8.1E-116 T 28-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AL549_RS17790 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 148 179 7.9E-9 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS17790 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 1.9E-9 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS17790 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 257 0.0029 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS17790 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 SUPERFAMILY SSF51161 32 316 7.15E-83 T 28-03-2018 IPR011004 Trimeric LpxA-like AL549_RS17790 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 35.178 T 28-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AL549_RS17790 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 88 8.4E-22 T 28-03-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 AL549_RS17790 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 106 134 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL549_RS17790 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 Gene3D G3DSA:2.160.10.10 23 134 9.8E-17 T 28-03-2018 AL549_RS17790 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 Gene3D G3DSA:2.160.10.10 135 309 9.5E-45 T 28-03-2018 AL549_RS04130 61fb8aa0665acde274895463b110a4ec 191 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 184 1.3E-70 T 28-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AL549_RS04130 61fb8aa0665acde274895463b110a4ec 191 PIRSF PIRSF000013 1 191 9.1E-94 T 28-03-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 AL549_RS04130 61fb8aa0665acde274895463b110a4ec 191 Gene3D G3DSA:1.10.468.10 58 188 1.2E-26 T 28-03-2018 AL549_RS04130 61fb8aa0665acde274895463b110a4ec 191 SUPERFAMILY SSF48695 16 190 7.03E-56 T 28-03-2018 IPR011031 Multihaem cytochrome AL549_RS04130 61fb8aa0665acde274895463b110a4ec 191 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 4 185 5.8E-95 T 28-03-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 SMART SM00388 459 527 1.2E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 SMART SM00091 874 939 2.4E-5 T 28-03-2018 IPR000014 PAS domain AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 1.5E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 4.2E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 Pfam PF00072 Response regulator receiver domain 726 837 3.8E-31 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 Pfam PF00989 PAS fold 877 926 6.1E-6 T 28-03-2018 IPR013767 PAS fold GO:0006355 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 SMART SM00304 377 430 2.2E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 SUPERFAMILY SSF158472 378 428 6.8E-11 T 28-03-2018 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 SMART SM00387 573 684 1.9E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 Gene3D G3DSA:3.30.450.20 877 971 2.2E-8 T 28-03-2018 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 Gene3D G3DSA:3.40.50.2300 717 876 3.3E-43 T 28-03-2018 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 SUPERFAMILY SSF55874 516 688 4.98E-46 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 Gene3D G3DSA:3.30.565.10 531 693 2.2E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 SUPERFAMILY SSF52172 719 841 4.7E-41 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 Gene3D G3DSA:1.10.287.130 449 523 1.2E-17 T 28-03-2018 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 SUPERFAMILY SSF47384 445 527 3.73E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 Gene3D G3DSA:3.30.450.20 235 346 7.1E-5 T 28-03-2018 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 Pfam PF00672 HAMP domain 379 427 8.8E-12 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 Gene3D G3DSA:3.30.450.20 107 234 0.0014 T 28-03-2018 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 SMART SM00448 723 836 8.6E-45 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 3.0E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 3.0E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 3.0E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 3.0E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS18690 638aadd6a0b89671910082efa303d480 1129 SUPERFAMILY SSF55785 861 930 8.03E-9 T 28-03-2018 IPR000014 PAS domain AL549_RS01960 6a1a04f09f9b8beab915962cb534cf7c 324 SUPERFAMILY SSF110849 75 150 1.41E-8 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL549_RS01960 6a1a04f09f9b8beab915962cb534cf7c 324 SMART SM00470 53 149 2.5E-6 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL549_RS01960 6a1a04f09f9b8beab915962cb534cf7c 324 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 67 231 3.8E-23 T 28-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AL549_RS01960 6a1a04f09f9b8beab915962cb534cf7c 324 Pfam PF02195 ParB-like nuclease domain 77 145 3.1E-8 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL549_RS01960 6a1a04f09f9b8beab915962cb534cf7c 324 Gene3D G3DSA:3.90.1530.10 26 152 1.2E-8 T 28-03-2018 AL549_RS20370 df90b6c1f544fc6e812d16069bbd8cff 159 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 2.0E-28 T 28-03-2018 IPR012659 Conserved hypothetical protein CHP02444 AL549_RS20370 df90b6c1f544fc6e812d16069bbd8cff 159 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 2.0E-42 T 28-03-2018 IPR012659 Conserved hypothetical protein CHP02444 AL549_RS23145 f458c70dc0ff8e2a21cfa6d519da71f3 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 3.5E-57 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23145 f458c70dc0ff8e2a21cfa6d519da71f3 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.624 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23145 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 4.5E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23145 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 4.5E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23145 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 4.5E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23145 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 4.5E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23145 f458c70dc0ff8e2a21cfa6d519da71f3 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 7.5E-47 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AL549_RS23145 f458c70dc0ff8e2a21cfa6d519da71f3 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 28-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23145 f458c70dc0ff8e2a21cfa6d519da71f3 136 SUPERFAMILY SSF54686 3 133 4.58E-53 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AL549_RS23145 f458c70dc0ff8e2a21cfa6d519da71f3 136 Gene3D G3DSA:3.90.1170.10 1 136 3.8E-49 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AL549_RS10825 881f816f64ff5d2ff0fc4f462f4762ec 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 5.8E-55 T 28-03-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 AL549_RS10825 881f816f64ff5d2ff0fc4f462f4762ec 353 SUPERFAMILY SSF52096 103 213 9.33E-31 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS10825 881f816f64ff5d2ff0fc4f462f4762ec 353 SUPERFAMILY SSF52096 244 303 9.33E-31 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS10825 881f816f64ff5d2ff0fc4f462f4762ec 353 Pfam PF01343 Peptidase family S49 166 314 2.4E-47 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AL549_RS10825 881f816f64ff5d2ff0fc4f462f4762ec 353 Gene3D G3DSA:3.90.226.10 129 312 1.3E-31 T 28-03-2018 AL549_RS02635 51eb1ca0cc56e06e694a4096536e6b11 262 SUPERFAMILY SSF46785 5 70 1.18E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02635 51eb1ca0cc56e06e694a4096536e6b11 262 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 8.4E-13 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS02635 51eb1ca0cc56e06e694a4096536e6b11 262 SUPERFAMILY SSF100950 74 234 9.21E-34 T 28-03-2018 AL549_RS02635 51eb1ca0cc56e06e694a4096536e6b11 262 SMART SM01134 73 233 2.0E-68 T 28-03-2018 AL549_RS02635 51eb1ca0cc56e06e694a4096536e6b11 262 Gene3D G3DSA:1.10.10.10 1 62 9.2E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02635 51eb1ca0cc56e06e694a4096536e6b11 262 SMART SM00420 6 58 5.8E-10 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS02635 51eb1ca0cc56e06e694a4096536e6b11 262 Gene3D G3DSA:3.40.50.1360 73 239 7.6E-43 T 28-03-2018 AL549_RS02635 51eb1ca0cc56e06e694a4096536e6b11 262 Pfam PF00455 DeoR C terminal sensor domain 75 232 1.3E-51 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:3.40.50.1380 937 1072 2.0E-26 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 3.1E-41 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.107 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:3.30.470.20 119 403 2.1E-65 T 28-03-2018 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:3.30.1490.20 655 744 3.0E-23 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SMART SM00851 955 1041 2.0E-25 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SUPERFAMILY SSF48108 397 554 3.01E-52 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Pfam PF02142 MGS-like domain 956 1041 1.5E-15 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SUPERFAMILY SSF52335 936 1071 2.62E-34 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 8.1E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 8.1E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.1E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.1E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.1E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.1E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.1E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SMART SM01096 424 547 5.8E-76 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:3.40.50.20 539 654 1.2E-61 T 28-03-2018 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:1.10.1030.10 404 538 1.1E-53 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:3.30.470.20 745 935 5.1E-45 T 28-03-2018 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SUPERFAMILY SSF52440 1 127 3.17E-50 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 1.2E-37 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.5E-72 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:3.40.50.20 4 109 2.1E-40 T 28-03-2018 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.389 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SUPERFAMILY SSF56059 673 932 3.54E-104 T 28-03-2018 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SUPERFAMILY SSF56059 128 401 2.12E-108 T 28-03-2018 AL549_RS07600 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SUPERFAMILY SSF52440 556 675 3.02E-49 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL549_RS04780 0e57e86884458783f2926ca13088b68e 70 SUPERFAMILY SSF50249 3 69 4.07E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS04780 0e57e86884458783f2926ca13088b68e 70 SMART SM00357 6 70 6.4E-32 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AL549_RS04780 0e57e86884458783f2926ca13088b68e 70 Gene3D G3DSA:2.40.50.140 1 70 2.4E-29 T 28-03-2018 AL549_RS04780 0e57e86884458783f2926ca13088b68e 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 6.8E-30 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL549_RS04780 0e57e86884458783f2926ca13088b68e 70 PIRSF PIRSF002599 1 70 4.6E-26 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 AL549_RS04780 0e57e86884458783f2926ca13088b68e 70 PRINTS PR00050 Cold shock protein signature 28 37 3.1E-17 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL549_RS04780 0e57e86884458783f2926ca13088b68e 70 PRINTS PR00050 Cold shock protein signature 7 22 3.1E-17 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL549_RS04780 0e57e86884458783f2926ca13088b68e 70 PRINTS PR00050 Cold shock protein signature 43 61 3.1E-17 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL549_RS16480 7e6084bf93312687699a164634854e67 334 Gene3D G3DSA:1.10.8.60 189 259 1.7E-31 T 28-03-2018 AL549_RS16480 7e6084bf93312687699a164634854e67 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 2.3E-146 T 28-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AL549_RS16480 7e6084bf93312687699a164634854e67 334 Gene3D G3DSA:1.10.10.10 262 332 4.3E-34 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS16480 7e6084bf93312687699a164634854e67 334 SUPERFAMILY SSF52540 25 256 1.98E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16480 7e6084bf93312687699a164634854e67 334 SUPERFAMILY SSF46785 262 332 2.39E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS16480 7e6084bf93312687699a164634854e67 334 SMART SM00382 56 189 2.0E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS16480 7e6084bf93312687699a164634854e67 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 4.0E-39 T 28-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AL549_RS16480 7e6084bf93312687699a164634854e67 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.3E-33 T 28-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AL549_RS16480 7e6084bf93312687699a164634854e67 334 Gene3D G3DSA:3.40.50.300 23 186 5.2E-30 T 28-03-2018 AL549_RS16480 7e6084bf93312687699a164634854e67 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 1.8E-116 T 28-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AL549_RS16480 7e6084bf93312687699a164634854e67 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 182.417 T 28-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AL549_RS03520 7cfcf1f4a313f4a067d74739760834ab 26 TIGRFAM TIGR02616 tnaC_leader: tryptophanase leader peptide 4 25 3.1E-10 T 28-03-2018 IPR012620 Tryptophanese operon leader peptide GO:0031554|GO:0031556 AL549_RS03930 b7f1df9a87e0e093a5e28d3d082b25e1 290 Gene3D G3DSA:3.40.190.10 81 177 2.3E-13 T 28-03-2018 AL549_RS03930 b7f1df9a87e0e093a5e28d3d082b25e1 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03930 b7f1df9a87e0e093a5e28d3d082b25e1 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03930 b7f1df9a87e0e093a5e28d3d082b25e1 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03930 b7f1df9a87e0e093a5e28d3d082b25e1 290 SUPERFAMILY SSF53850 89 287 6.98E-27 T 28-03-2018 AL549_RS03930 b7f1df9a87e0e093a5e28d3d082b25e1 290 SUPERFAMILY SSF46785 2 108 1.11E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03930 b7f1df9a87e0e093a5e28d3d082b25e1 290 Pfam PF03466 LysR substrate binding domain 87 283 4.6E-26 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS03930 b7f1df9a87e0e093a5e28d3d082b25e1 290 Gene3D G3DSA:1.10.10.10 1 80 2.6E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03930 b7f1df9a87e0e093a5e28d3d082b25e1 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 4.3E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03930 b7f1df9a87e0e093a5e28d3d082b25e1 290 Gene3D G3DSA:3.40.190.10 178 255 5.5E-7 T 28-03-2018 AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 SUPERFAMILY SSF82714 185 269 4.97E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 Gene3D G3DSA:3.30.2090.10 183 271 6.6E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 Gene3D G3DSA:3.30.70.1430 45 142 2.2E-19 T 28-03-2018 AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 Gene3D G3DSA:1.20.1640.10 287 509 1.1E-46 T 28-03-2018 AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 SUPERFAMILY SSF82714 716 800 3.14E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 SUPERFAMILY SSF82866 798 1037 9.29E-52 T 28-03-2018 AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1037 0.0 T 28-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 Gene3D G3DSA:3.30.70.1430 560 658 7.7E-11 T 28-03-2018 AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.3E-31 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.3E-31 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.3E-31 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.3E-31 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 1.3E-31 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.3E-31 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.3E-31 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 SUPERFAMILY SSF82693 138 184 2.88E-23 T 28-03-2018 AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 SUPERFAMILY SSF82693 271 328 2.88E-23 T 28-03-2018 AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 SUPERFAMILY SSF82866 294 498 1.44E-42 T 28-03-2018 AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 4.0E-246 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 SUPERFAMILY SSF82693 46 127 6.8E-20 T 28-03-2018 AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 Gene3D G3DSA:3.30.2090.10 716 802 1.4E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS03530 775f20b8724960f08e650ee6954563c2 1042 Gene3D G3DSA:1.20.1640.10 825 1036 5.1E-36 T 28-03-2018 AL549_RS10310 d71cd0b6b66bf70b0569a0bfe15fee41 453 SUPERFAMILY SSF52172 2 177 6.55E-40 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS10310 d71cd0b6b66bf70b0569a0bfe15fee41 453 Gene3D G3DSA:3.40.50.300 141 305 1.3E-26 T 28-03-2018 AL549_RS10310 d71cd0b6b66bf70b0569a0bfe15fee41 453 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 219 234 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL549_RS10310 d71cd0b6b66bf70b0569a0bfe15fee41 453 Gene3D G3DSA:1.10.10.60 374 445 1.3E-12 T 28-03-2018 AL549_RS10310 d71cd0b6b66bf70b0569a0bfe15fee41 453 Gene3D G3DSA:3.40.50.2300 1 140 1.1E-29 T 28-03-2018 AL549_RS10310 d71cd0b6b66bf70b0569a0bfe15fee41 453 Pfam PF02954 Bacterial regulatory protein, Fis family 404 444 8.6E-11 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS10310 d71cd0b6b66bf70b0569a0bfe15fee41 453 Pfam PF00072 Response regulator receiver domain 2 108 1.9E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS10310 d71cd0b6b66bf70b0569a0bfe15fee41 453 SUPERFAMILY SSF46689 346 443 1.25E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS10310 d71cd0b6b66bf70b0569a0bfe15fee41 453 SMART SM00448 1 108 3.7E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS10310 d71cd0b6b66bf70b0569a0bfe15fee41 453 Pfam PF00158 Sigma-54 interaction domain 134 299 3.6E-69 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL549_RS10310 d71cd0b6b66bf70b0569a0bfe15fee41 453 Gene3D G3DSA:1.10.8.60 306 373 8.2E-20 T 28-03-2018 AL549_RS10310 d71cd0b6b66bf70b0569a0bfe15fee41 453 SUPERFAMILY SSF52540 133 376 6.52E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS10310 d71cd0b6b66bf70b0569a0bfe15fee41 453 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 346 355 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL549_RS10310 d71cd0b6b66bf70b0569a0bfe15fee41 453 SMART SM00382 153 296 7.3E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS11085 5442425b082c0b5c5930aef2b7cb9208 374 Gene3D G3DSA:3.40.50.620 1 215 8.0E-64 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS11085 5442425b082c0b5c5930aef2b7cb9208 374 Gene3D G3DSA:2.40.30.10 287 374 1.2E-27 T 28-03-2018 AL549_RS11085 5442425b082c0b5c5930aef2b7cb9208 374 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 365 2.3E-152 T 28-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 AL549_RS11085 5442425b082c0b5c5930aef2b7cb9208 374 SUPERFAMILY SSF52402 5 247 2.65E-56 T 28-03-2018 AL549_RS11085 5442425b082c0b5c5930aef2b7cb9208 374 Gene3D G3DSA:2.30.30.280 216 285 3.9E-25 T 28-03-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 AL549_RS11085 5442425b082c0b5c5930aef2b7cb9208 374 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 366 40.008 T 28-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 AL549_RS11085 5442425b082c0b5c5930aef2b7cb9208 374 Pfam PF03054 tRNA methyl transferase 7 365 3.8E-143 T 28-03-2018 AL549_RS21590 b3f7411d9df3cc46cecf5bd59fdefc1c 296 Gene3D G3DSA:1.10.10.10 1 81 2.5E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21590 b3f7411d9df3cc46cecf5bd59fdefc1c 296 SUPERFAMILY SSF46785 1 79 2.66E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21590 b3f7411d9df3cc46cecf5bd59fdefc1c 296 Gene3D G3DSA:3.40.190.10 195 265 5.8E-9 T 28-03-2018 AL549_RS21590 b3f7411d9df3cc46cecf5bd59fdefc1c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.5E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS21590 b3f7411d9df3cc46cecf5bd59fdefc1c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.5E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS21590 b3f7411d9df3cc46cecf5bd59fdefc1c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.5E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS21590 b3f7411d9df3cc46cecf5bd59fdefc1c 296 Pfam PF03466 LysR substrate binding domain 88 289 2.0E-34 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS21590 b3f7411d9df3cc46cecf5bd59fdefc1c 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.0E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS21590 b3f7411d9df3cc46cecf5bd59fdefc1c 296 SUPERFAMILY SSF53850 88 290 8.28E-32 T 28-03-2018 AL549_RS21590 b3f7411d9df3cc46cecf5bd59fdefc1c 296 Gene3D G3DSA:3.40.190.10 82 194 2.1E-17 T 28-03-2018 AL549_RS05240 5db7b82ab15f6f92af1cd4ca95bcdd6f 458 Gene3D G3DSA:1.20.1250.20 18 225 1.0E-32 T 28-03-2018 AL549_RS05240 5db7b82ab15f6f92af1cd4ca95bcdd6f 458 PIRSF PIRSF002808 5 453 6.8E-168 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AL549_RS05240 5db7b82ab15f6f92af1cd4ca95bcdd6f 458 Pfam PF07690 Major Facilitator Superfamily 34 401 4.7E-48 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS05240 5db7b82ab15f6f92af1cd4ca95bcdd6f 458 Gene3D G3DSA:1.20.1250.20 241 454 4.9E-36 T 28-03-2018 AL549_RS05240 5db7b82ab15f6f92af1cd4ca95bcdd6f 458 SUPERFAMILY SSF103473 18 451 5.49E-87 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS05240 5db7b82ab15f6f92af1cd4ca95bcdd6f 458 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 28-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 AL549_RS05240 5db7b82ab15f6f92af1cd4ca95bcdd6f 458 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 9.2E-233 T 28-03-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 AL549_RS05240 5db7b82ab15f6f92af1cd4ca95bcdd6f 458 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 3.1E-150 T 28-03-2018 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 PIRSF PIRSF000350 1 445 2.2E-82 T 28-03-2018 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 9.9E-70 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 Gene3D G3DSA:3.30.390.30 325 451 1.5E-37 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 3.4E-33 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.1E-28 T 28-03-2018 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.1E-28 T 28-03-2018 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.1E-28 T 28-03-2018 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.1E-28 T 28-03-2018 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.1E-28 T 28-03-2018 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 Gene3D G3DSA:3.40.50.720 165 324 8.8E-34 T 28-03-2018 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 SUPERFAMILY SSF51905 1 361 5.61E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 1.2E-214 T 28-03-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 Gene3D G3DSA:3.50.50.60 1 164 1.0E-31 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 8.4E-65 T 28-03-2018 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 8.4E-65 T 28-03-2018 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 8.4E-65 T 28-03-2018 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 8.4E-65 T 28-03-2018 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 8.4E-65 T 28-03-2018 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 8.4E-65 T 28-03-2018 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 8.4E-65 T 28-03-2018 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 8.4E-65 T 28-03-2018 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 8.4E-65 T 28-03-2018 AL549_RS21420 f99f3225406ff1b4a35615421b1aaf94 451 SUPERFAMILY SSF55424 337 451 1.72E-35 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL549_RS22645 75b946de8f1e1ad7d94c23bcee18bf91 862 Gene3D G3DSA:2.170.130.10 26 170 9.4E-32 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL549_RS22645 75b946de8f1e1ad7d94c23bcee18bf91 862 Gene3D G3DSA:2.40.170.20 171 862 3.3E-68 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL549_RS22645 75b946de8f1e1ad7d94c23bcee18bf91 862 Pfam PF00593 TonB dependent receptor 335 860 7.1E-48 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL549_RS22645 75b946de8f1e1ad7d94c23bcee18bf91 862 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 167 1.4E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL549_RS22645 75b946de8f1e1ad7d94c23bcee18bf91 862 SUPERFAMILY SSF56935 26 185 1.34E-94 T 28-03-2018 AL549_RS22645 75b946de8f1e1ad7d94c23bcee18bf91 862 SUPERFAMILY SSF56935 613 862 1.34E-94 T 28-03-2018 AL549_RS22645 75b946de8f1e1ad7d94c23bcee18bf91 862 SUPERFAMILY SSF56935 298 570 1.34E-94 T 28-03-2018 AL549_RS22645 75b946de8f1e1ad7d94c23bcee18bf91 862 SUPERFAMILY SSF56935 219 233 1.34E-94 T 28-03-2018 AL549_RS23745 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23745 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 28-03-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23745 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23745 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23745 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 52 1.3E-18 T 28-03-2018 AL549_RS23745 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23745 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23745 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23745 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23745 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS12070 c95f5f5eb218c0ce3d178e2e406ca5b0 109 Gene3D G3DSA:3.30.1420.10 2 39 6.8E-17 T 28-03-2018 AL549_RS12070 c95f5f5eb218c0ce3d178e2e406ca5b0 109 Pfam PF04358 DsrC like protein 4 109 2.4E-44 T 28-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE AL549_RS12070 c95f5f5eb218c0ce3d178e2e406ca5b0 109 PIRSF PIRSF006223 2 109 1.2E-40 T 28-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE AL549_RS12070 c95f5f5eb218c0ce3d178e2e406ca5b0 109 Gene3D G3DSA:1.10.10.370 40 108 4.0E-32 T 28-03-2018 AL549_RS12070 c95f5f5eb218c0ce3d178e2e406ca5b0 109 SUPERFAMILY SSF69721 2 109 2.75E-41 T 28-03-2018 IPR025526 DsrC-like domain AL549_RS12070 c95f5f5eb218c0ce3d178e2e406ca5b0 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 2.9E-49 T 28-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE AL549_RS07960 d95121344b427b1ea842e0af0605aa9e 375 SMART SM00830 9 89 1.4E-28 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL549_RS07960 d95121344b427b1ea842e0af0605aa9e 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 7.9E-42 T 28-03-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AL549_RS07960 d95121344b427b1ea842e0af0605aa9e 375 SUPERFAMILY SSF51735 91 237 6.3E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS07960 d95121344b427b1ea842e0af0605aa9e 375 Gene3D G3DSA:1.20.59.10 2 90 7.8E-26 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL549_RS07960 d95121344b427b1ea842e0af0605aa9e 375 Pfam PF02153 Prephenate dehydrogenase 138 344 4.7E-32 T 28-03-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AL549_RS07960 d95121344b427b1ea842e0af0605aa9e 375 PIRSF PIRSF001499 1 374 3.2E-181 T 28-03-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AL549_RS07960 d95121344b427b1ea842e0af0605aa9e 375 Gene3D G3DSA:1.10.3660.10 249 372 3.3E-31 T 28-03-2018 AL549_RS07960 d95121344b427b1ea842e0af0605aa9e 375 SUPERFAMILY SSF48600 4 88 1.03E-23 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL549_RS07960 d95121344b427b1ea842e0af0605aa9e 375 SUPERFAMILY SSF48179 242 366 2.04E-39 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL549_RS07960 d95121344b427b1ea842e0af0605aa9e 375 Gene3D G3DSA:3.40.50.720 91 247 3.0E-21 T 28-03-2018 AL549_RS07960 d95121344b427b1ea842e0af0605aa9e 375 Pfam PF01817 Chorismate mutase type II 9 87 6.7E-21 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL549_RS18140 f90cf5ff4dad9e7f32359ff2e192f002 612 Gene3D G3DSA:3.40.720.10 254 555 2.2E-38 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS18140 f90cf5ff4dad9e7f32359ff2e192f002 612 Pfam PF00884 Sulfatase 255 526 1.3E-32 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL549_RS18140 f90cf5ff4dad9e7f32359ff2e192f002 612 PIRSF PIRSF004950 2 611 1.5E-235 T 28-03-2018 IPR012159 Inner membrane protein YejM AL549_RS18140 f90cf5ff4dad9e7f32359ff2e192f002 612 SUPERFAMILY SSF53649 251 576 6.42E-56 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS18140 f90cf5ff4dad9e7f32359ff2e192f002 612 Pfam PF11893 Domain of unknown function (DUF3413) 5 247 6.2E-59 T 28-03-2018 IPR024588 Inner membrane protein YejM, N-terminal AL549_RS03450 b17e71197a2159499af05210af79aa5b 144 SUPERFAMILY SSF55729 1 134 2.78E-29 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS03450 b17e71197a2159499af05210af79aa5b 144 Gene3D G3DSA:3.40.630.30 1 141 4.3E-28 T 28-03-2018 AL549_RS03450 b17e71197a2159499af05210af79aa5b 144 Pfam PF00583 Acetyltransferase (GNAT) family 34 125 1.4E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS07490 c6e4bfab51d4608b04453a482ea20fe6 603 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 603 27.6 T 28-03-2018 IPR007443 Penicillin-binding protein activator LpoA AL549_RS07490 c6e4bfab51d4608b04453a482ea20fe6 603 SUPERFAMILY SSF53822 456 600 9.89E-67 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS07490 c6e4bfab51d4608b04453a482ea20fe6 603 SUPERFAMILY SSF53822 258 428 9.89E-67 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS07490 c6e4bfab51d4608b04453a482ea20fe6 603 Gene3D G3DSA:3.40.50.2300 427 596 5.3E-9 T 28-03-2018 AL549_RS07490 c6e4bfab51d4608b04453a482ea20fe6 603 Gene3D G3DSA:3.40.50.2300 258 419 7.6E-17 T 28-03-2018 AL549_RS07490 c6e4bfab51d4608b04453a482ea20fe6 603 Pfam PF04348 LppC putative lipoprotein 40 601 3.5E-156 T 28-03-2018 IPR007443 Penicillin-binding protein activator LpoA AL549_RS17350 347ae0ae766a41059e3223ee6bcad9e0 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 2.1E-78 T 28-03-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 AL549_RS17350 347ae0ae766a41059e3223ee6bcad9e0 205 Pfam PF00005 ABC transporter 18 158 1.9E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS17350 347ae0ae766a41059e3223ee6bcad9e0 205 SUPERFAMILY SSF52540 2 193 1.82E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS17350 347ae0ae766a41059e3223ee6bcad9e0 205 Gene3D G3DSA:3.40.50.300 1 197 9.1E-42 T 28-03-2018 AL549_RS17350 347ae0ae766a41059e3223ee6bcad9e0 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS17350 347ae0ae766a41059e3223ee6bcad9e0 205 SMART SM00382 26 205 2.7E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS07155 16b6d586ee2142eb60956fad307d733d 664 Gene3D G3DSA:1.10.287.950 445 664 1.2E-45 T 28-03-2018 AL549_RS07155 16b6d586ee2142eb60956fad307d733d 664 SMART SM00283 402 663 2.4E-52 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS07155 16b6d586ee2142eb60956fad307d733d 664 Gene3D G3DSA:1.10.287.1060 380 444 0.06 T 28-03-2018 AL549_RS07155 16b6d586ee2142eb60956fad307d733d 664 Pfam PF08376 Nitrate and nitrite sensing 59 296 3.5E-35 T 28-03-2018 IPR013587 Nitrate/nitrite sensing protein AL549_RS07155 16b6d586ee2142eb60956fad307d733d 664 SMART SM00304 334 387 0.0055 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS07155 16b6d586ee2142eb60956fad307d733d 664 SUPERFAMILY SSF58104 355 664 2.35E-63 T 28-03-2018 AL549_RS07155 16b6d586ee2142eb60956fad307d733d 664 Gene3D G3DSA:1.20.120.570 232 379 0.27 T 28-03-2018 AL549_RS07155 16b6d586ee2142eb60956fad307d733d 664 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 475 629 4.4E-39 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS02065 1472b2aef18fe8f7faf7dc020042df11 304 Gene3D G3DSA:3.40.190.10 97 184 1.3E-5 T 28-03-2018 AL549_RS02065 1472b2aef18fe8f7faf7dc020042df11 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 71 1.0E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS02065 1472b2aef18fe8f7faf7dc020042df11 304 SUPERFAMILY SSF53850 99 300 1.14E-25 T 28-03-2018 AL549_RS02065 1472b2aef18fe8f7faf7dc020042df11 304 SUPERFAMILY SSF46785 11 96 1.25E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02065 1472b2aef18fe8f7faf7dc020042df11 304 Pfam PF03466 LysR substrate binding domain 97 300 3.7E-21 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS02065 1472b2aef18fe8f7faf7dc020042df11 304 Gene3D G3DSA:1.10.10.10 5 92 7.7E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02065 1472b2aef18fe8f7faf7dc020042df11 304 Gene3D G3DSA:3.40.190.10 185 271 1.1E-12 T 28-03-2018 AL549_RS21660 6c57e347941d117de58f6244717b9b7c 313 Gene3D G3DSA:3.40.190.10 183 271 8.9E-12 T 28-03-2018 AL549_RS21660 6c57e347941d117de58f6244717b9b7c 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 7.1E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS21660 6c57e347941d117de58f6244717b9b7c 313 Gene3D G3DSA:1.10.10.10 1 91 8.2E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21660 6c57e347941d117de58f6244717b9b7c 313 SUPERFAMILY SSF46785 7 87 6.17E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21660 6c57e347941d117de58f6244717b9b7c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS21660 6c57e347941d117de58f6244717b9b7c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS21660 6c57e347941d117de58f6244717b9b7c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS21660 6c57e347941d117de58f6244717b9b7c 313 SUPERFAMILY SSF53850 92 298 3.26E-39 T 28-03-2018 AL549_RS21660 6c57e347941d117de58f6244717b9b7c 313 Gene3D G3DSA:3.40.190.10 96 182 3.8E-15 T 28-03-2018 AL549_RS21660 6c57e347941d117de58f6244717b9b7c 313 Pfam PF03466 LysR substrate binding domain 99 299 5.1E-22 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS15875 615c43f81233d608d3b682ea52f79728 380 Gene3D G3DSA:3.30.450.40 2 143 2.0E-9 T 28-03-2018 IPR029016 GAF domain-like AL549_RS15875 615c43f81233d608d3b682ea52f79728 380 SUPERFAMILY SSF109604 183 359 9.42E-23 T 28-03-2018 AL549_RS15875 615c43f81233d608d3b682ea52f79728 380 Gene3D G3DSA:1.10.3210.10 144 370 3.8E-31 T 28-03-2018 AL549_RS15875 615c43f81233d608d3b682ea52f79728 380 Pfam PF13487 HD domain 241 310 1.1E-13 T 28-03-2018 AL549_RS15875 615c43f81233d608d3b682ea52f79728 380 SUPERFAMILY SSF55781 36 152 4.14E-10 T 28-03-2018 IPR029016 GAF domain-like AL549_RS09550 7485d64fa140fa593cf64a53d53ed506 577 Gene3D G3DSA:3.30.1360.70 1 106 8.8E-28 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AL549_RS09550 7485d64fa140fa593cf64a53d53ed506 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 3.8E-20 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AL549_RS09550 7485d64fa140fa593cf64a53d53ed506 577 Gene3D G3DSA:3.40.50.620 107 441 1.5E-58 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS09550 7485d64fa140fa593cf64a53d53ed506 577 SUPERFAMILY SSF52374 110 454 1.49E-93 T 28-03-2018 AL549_RS09550 7485d64fa140fa593cf64a53d53ed506 577 Pfam PF05746 DALR anticodon binding domain 461 577 4.3E-36 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AL549_RS09550 7485d64fa140fa593cf64a53d53ed506 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 3.7E-199 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL549_RS09550 7485d64fa140fa593cf64a53d53ed506 577 SUPERFAMILY SSF47323 455 577 2.03E-35 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS09550 7485d64fa140fa593cf64a53d53ed506 577 Gene3D G3DSA:1.10.730.10 442 577 1.2E-47 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS09550 7485d64fa140fa593cf64a53d53ed506 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.132 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL549_RS09550 7485d64fa140fa593cf64a53d53ed506 577 SUPERFAMILY SSF55190 2 96 5.89E-22 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AL549_RS09550 7485d64fa140fa593cf64a53d53ed506 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL549_RS09550 7485d64fa140fa593cf64a53d53ed506 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL549_RS09550 7485d64fa140fa593cf64a53d53ed506 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL549_RS09550 7485d64fa140fa593cf64a53d53ed506 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL549_RS09550 7485d64fa140fa593cf64a53d53ed506 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS09550 7485d64fa140fa593cf64a53d53ed506 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 3.9E-162 T 28-03-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 AL549_RS09550 7485d64fa140fa593cf64a53d53ed506 577 SMART SM01016 5 87 2.2E-28 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AL549_RS09550 7485d64fa140fa593cf64a53d53ed506 577 SMART SM00836 461 577 8.7E-41 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AL549_RS14720 8d9c31a73f7eac1476facd33411e46c9 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 7.4E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS08765 a4656ea3d3af869eca5f5612743b38fe 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 155 3.3E-37 T 28-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AL549_RS08765 a4656ea3d3af869eca5f5612743b38fe 188 SUPERFAMILY SSF56784 4 181 5.75E-48 T 28-03-2018 IPR023214 HAD-like domain AL549_RS08765 a4656ea3d3af869eca5f5612743b38fe 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 3.7E-81 T 28-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AL549_RS08765 a4656ea3d3af869eca5f5612743b38fe 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 153 3.3E-39 T 28-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AL549_RS08765 a4656ea3d3af869eca5f5612743b38fe 188 PIRSF PIRSF004682 1 186 5.7E-64 T 28-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AL549_RS08765 a4656ea3d3af869eca5f5612743b38fe 188 Pfam PF13242 HAD-hyrolase-like 107 176 5.5E-13 T 28-03-2018 AL549_RS08765 a4656ea3d3af869eca5f5612743b38fe 188 Gene3D G3DSA:3.40.50.1000 2 187 2.3E-30 T 28-03-2018 IPR023214 HAD-like domain AL549_RS00955 8f7ee8d7883da4160a1ba3b41aaf59a9 240 PIRSF PIRSF005426 1 240 1.3E-83 T 28-03-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 AL549_RS00955 8f7ee8d7883da4160a1ba3b41aaf59a9 240 SUPERFAMILY SSF55469 1 239 5.63E-73 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL549_RS00955 8f7ee8d7883da4160a1ba3b41aaf59a9 240 Pfam PF00881 Nitroreductase family 9 159 5.9E-23 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL549_RS00955 8f7ee8d7883da4160a1ba3b41aaf59a9 240 Gene3D G3DSA:3.40.109.10 1 240 8.6E-60 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL549_RS05955 0d58db4cd49b2a99b121cee832edc1ea 197 PIRSF PIRSF011489 1 196 1.1E-87 T 28-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AL549_RS05955 0d58db4cd49b2a99b121cee832edc1ea 197 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 1.1E-28 T 28-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AL549_RS20600 0d82ff89b99f14e0ade52bdc5f4a9f44 295 SUPERFAMILY SSF103481 217 294 6.93E-11 T 28-03-2018 AL549_RS20600 0d82ff89b99f14e0ade52bdc5f4a9f44 295 SUPERFAMILY SSF103481 36 140 2.75E-12 T 28-03-2018 AL549_RS20600 0d82ff89b99f14e0ade52bdc5f4a9f44 295 Pfam PF00892 EamA-like transporter family 5 135 3.5E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS20600 0d82ff89b99f14e0ade52bdc5f4a9f44 295 Pfam PF00892 EamA-like transporter family 156 294 6.6E-17 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS11280 5c7e23a652f10f7883714ed49dc32dcf 331 Gene3D G3DSA:3.40.50.300 1 331 8.7E-55 T 28-03-2018 AL549_RS11280 5c7e23a652f10f7883714ed49dc32dcf 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 1.4E-15 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS11280 5c7e23a652f10f7883714ed49dc32dcf 331 SUPERFAMILY SSF52540 4 269 5.54E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11280 5c7e23a652f10f7883714ed49dc32dcf 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.2E-20 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS11280 5c7e23a652f10f7883714ed49dc32dcf 331 Pfam PF00005 ABC transporter 24 187 2.2E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS11280 5c7e23a652f10f7883714ed49dc32dcf 331 SMART SM00382 32 253 5.1E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS18240 7550e70977c03c9d029b9c11427adea5 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 28-03-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AL549_RS18240 7550e70977c03c9d029b9c11427adea5 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 9.4E-67 T 28-03-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AL549_RS18240 7550e70977c03c9d029b9c11427adea5 350 PIRSF PIRSF000808 2 345 2.3E-124 T 28-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AL549_RS18240 7550e70977c03c9d029b9c11427adea5 350 Gene3D G3DSA:3.30.428.10 47 166 6.1E-49 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL549_RS18240 7550e70977c03c9d029b9c11427adea5 350 Gene3D G3DSA:3.30.428.10 167 350 2.7E-56 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL549_RS18240 7550e70977c03c9d029b9c11427adea5 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 349 1.5E-183 T 28-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AL549_RS18240 7550e70977c03c9d029b9c11427adea5 350 SUPERFAMILY SSF54197 6 179 7.29E-72 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL549_RS18240 7550e70977c03c9d029b9c11427adea5 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 349 1.3E-65 T 28-03-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AL549_RS18240 7550e70977c03c9d029b9c11427adea5 350 SUPERFAMILY SSF54197 181 348 8.85E-56 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL549_RS08800 cf4a6cb21c740df4f10c2005afa74005 321 SMART SM00729 84 293 3.2E-19 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL549_RS08800 cf4a6cb21c740df4f10c2005afa74005 321 Gene3D G3DSA:3.20.20.70 28 305 2.0E-29 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS08800 cf4a6cb21c740df4f10c2005afa74005 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 1.7E-8 T 28-03-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL549_RS08800 cf4a6cb21c740df4f10c2005afa74005 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.524 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL549_RS08800 cf4a6cb21c740df4f10c2005afa74005 321 Pfam PF04055 Radical SAM superfamily 91 252 1.1E-18 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS08800 cf4a6cb21c740df4f10c2005afa74005 321 PIRSF PIRSF005963 1 320 1.5E-129 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL549_RS08800 cf4a6cb21c740df4f10c2005afa74005 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 3.6E-149 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL549_RS08800 cf4a6cb21c740df4f10c2005afa74005 321 SUPERFAMILY SSF102114 52 314 1.07E-67 T 28-03-2018 AL549_RS19165 6485081a7d015a93e665e1c708332db3 423 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 248 411 1.2E-34 T 28-03-2018 IPR000160 GGDEF domain AL549_RS19165 6485081a7d015a93e665e1c708332db3 423 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 408 1.3E-36 T 28-03-2018 IPR000160 GGDEF domain AL549_RS19165 6485081a7d015a93e665e1c708332db3 423 SMART SM00267 234 413 1.6E-37 T 28-03-2018 IPR000160 GGDEF domain AL549_RS19165 6485081a7d015a93e665e1c708332db3 423 Gene3D G3DSA:3.30.70.270 243 422 4.0E-46 T 28-03-2018 AL549_RS19165 6485081a7d015a93e665e1c708332db3 423 SUPERFAMILY SSF55073 254 414 2.59E-38 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS18620 0afe0e79e65168923faf792e12e9313b 98 Gene3D G3DSA:3.30.110.60 2 97 1.4E-25 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL549_RS18620 0afe0e79e65168923faf792e12e9313b 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.7E-19 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL549_RS18620 0afe0e79e65168923faf792e12e9313b 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 1.0E-44 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL549_RS18620 0afe0e79e65168923faf792e12e9313b 98 SUPERFAMILY SSF75471 1 94 9.94E-29 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL549_RS18620 0afe0e79e65168923faf792e12e9313b 98 SMART SM01103 3 86 4.0E-39 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL549_RS18620 0afe0e79e65168923faf792e12e9313b 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 1.4E-36 T 28-03-2018 IPR017924 RNA-binding protein YhbY GO:0003723 AL549_RS11335 f3262f8f62c1620d1e0ebc31bad129cd 189 Pfam PF03352 Methyladenine glycosylase 10 185 8.1E-75 T 28-03-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AL549_RS11335 f3262f8f62c1620d1e0ebc31bad129cd 189 SUPERFAMILY SSF48150 6 187 8.63E-77 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL549_RS11335 f3262f8f62c1620d1e0ebc31bad129cd 189 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 7 185 3.1E-70 T 28-03-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 AL549_RS11335 f3262f8f62c1620d1e0ebc31bad129cd 189 Gene3D G3DSA:1.10.340.30 5 186 3.0E-81 T 28-03-2018 AL549_RS22070 79b5a9b63c5d95360ab7c6895d97309d 126 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 4.1E-29 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AL549_RS22070 79b5a9b63c5d95360ab7c6895d97309d 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 4.6E-23 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AL549_RS22070 79b5a9b63c5d95360ab7c6895d97309d 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 19.031 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AL549_RS18985 e397cfeb4fe3acac7cbd822eab209af7 521 SUPERFAMILY SSF55931 8 514 3.27E-199 T 28-03-2018 AL549_RS18985 e397cfeb4fe3acac7cbd822eab209af7 521 Pfam PF04262 Glutamate-cysteine ligase 14 378 2.9E-168 T 28-03-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL549_RS18985 e397cfeb4fe3acac7cbd822eab209af7 521 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 7 516 1.6E-206 T 28-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL549_RS18985 e397cfeb4fe3acac7cbd822eab209af7 521 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 521 220.786 T 28-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL549_RS23305 ca2f62caf939f781f2c8e140cd5ef5e6 300 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 39 288 3.3E-107 T 28-03-2018 IPR021254 Protein of unknown function DUF2806 AL549_RS23305 ca2f62caf939f781f2c8e140cd5ef5e6 300 Pfam PF10987 Protein of unknown function (DUF2806) 60 278 8.7E-88 T 28-03-2018 IPR021254 Protein of unknown function DUF2806 AL549_RS01805 cc9b6264ce8899b1a02d78613070b549 346 Gene3D G3DSA:3.30.1490.20 143 202 9.5E-16 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL549_RS01805 cc9b6264ce8899b1a02d78613070b549 346 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 126 306 3.2E-59 T 28-03-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL549_RS01805 cc9b6264ce8899b1a02d78613070b549 346 SUPERFAMILY SSF52440 1 121 3.45E-24 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL549_RS01805 cc9b6264ce8899b1a02d78613070b549 346 Gene3D G3DSA:3.40.50.20 1 130 6.4E-33 T 28-03-2018 AL549_RS01805 cc9b6264ce8899b1a02d78613070b549 346 Hamap MF_00162 Glutathione synthetase [gshB]. 1 325 99.051 T 28-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL549_RS01805 cc9b6264ce8899b1a02d78613070b549 346 SUPERFAMILY SSF56059 125 321 2.75E-43 T 28-03-2018 AL549_RS01805 cc9b6264ce8899b1a02d78613070b549 346 Gene3D G3DSA:3.30.470.20 203 309 6.7E-22 T 28-03-2018 AL549_RS01805 cc9b6264ce8899b1a02d78613070b549 346 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 121 2.7E-21 T 28-03-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL549_RS23570 46a496f4ca5aa0526094746e2820f594 162 SUPERFAMILY SSF53597 1 160 4.53E-58 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL549_RS23570 46a496f4ca5aa0526094746e2820f594 162 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.0E-14 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL549_RS23570 46a496f4ca5aa0526094746e2820f594 162 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.0E-14 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL549_RS23570 46a496f4ca5aa0526094746e2820f594 162 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.0E-14 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL549_RS23570 46a496f4ca5aa0526094746e2820f594 162 PRINTS PR00070 Dihydrofolate reductase signature 92 106 1.0E-14 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL549_RS23570 46a496f4ca5aa0526094746e2820f594 162 Gene3D G3DSA:3.40.430.10 1 161 5.0E-55 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL549_RS23570 46a496f4ca5aa0526094746e2820f594 162 Pfam PF00186 Dihydrofolate reductase 3 159 1.5E-60 T 28-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL549_RS23570 46a496f4ca5aa0526094746e2820f594 162 PIRSF PIRSF000194 1 161 2.1E-62 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL549_RS07780 bbc4ba019020e496c6eb1b75c21146d1 172 SUPERFAMILY SSF52218 1 169 2.35E-48 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS07780 bbc4ba019020e496c6eb1b75c21146d1 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 169 3.4E-67 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 AL549_RS07780 bbc4ba019020e496c6eb1b75c21146d1 172 Pfam PF00258 Flavodoxin 5 160 6.4E-28 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL549_RS07780 bbc4ba019020e496c6eb1b75c21146d1 172 Gene3D G3DSA:3.40.50.360 1 77 2.0E-15 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS07780 bbc4ba019020e496c6eb1b75c21146d1 172 Gene3D G3DSA:3.40.50.360 78 172 2.5E-19 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS07780 bbc4ba019020e496c6eb1b75c21146d1 172 PIRSF PIRSF038996 1 172 9.2E-58 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 AL549_RS22960 d52df3fcb95d709c10458de9b2be6d42 378 Gene3D G3DSA:3.10.560.10 252 344 1.3E-17 T 28-03-2018 AL549_RS22960 d52df3fcb95d709c10458de9b2be6d42 378 Gene3D G3DSA:3.10.560.10 162 251 2.0E-25 T 28-03-2018 AL549_RS22960 d52df3fcb95d709c10458de9b2be6d42 378 Pfam PF10531 SLBB domain 257 303 6.8E-6 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS22960 d52df3fcb95d709c10458de9b2be6d42 378 Pfam PF10531 SLBB domain 174 222 8.2E-9 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS22960 d52df3fcb95d709c10458de9b2be6d42 378 Gene3D G3DSA:1.20.5.70 345 374 7.6E-16 T 28-03-2018 AL549_RS22960 d52df3fcb95d709c10458de9b2be6d42 378 Gene3D G3DSA:3.30.1950.10 90 161 1.5E-23 T 28-03-2018 AL549_RS22960 d52df3fcb95d709c10458de9b2be6d42 378 Pfam PF02563 Polysaccharide biosynthesis/export protein 82 166 2.7E-26 T 28-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AL549_RS10350 ab8025e258330f2983f739534167c203 543 Gene3D G3DSA:3.40.190.10 210 306 6.0E-25 T 28-03-2018 AL549_RS10350 ab8025e258330f2983f739534167c203 543 PIRSF PIRSF002741 1 543 2.1E-118 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL549_RS10350 ab8025e258330f2983f739534167c203 543 Gene3D G3DSA:3.90.76.10 50 209 1.8E-41 T 28-03-2018 AL549_RS10350 ab8025e258330f2983f739534167c203 543 Gene3D G3DSA:3.10.105.10 307 512 4.2E-59 T 28-03-2018 AL549_RS10350 ab8025e258330f2983f739534167c203 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 461 6.8E-95 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL549_RS10350 ab8025e258330f2983f739534167c203 543 SUPERFAMILY SSF53850 35 530 4.52E-150 T 28-03-2018 AL549_RS10350 ab8025e258330f2983f739534167c203 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 28-03-2018 IPR023765 Solute-binding protein family 5, conserved site AL549_RS10980 95fa7a30a718d4736b8a5ff2ead6680a 983 Gene3D G3DSA:3.40.50.300 283 849 3.5E-53 T 28-03-2018 AL549_RS10980 95fa7a30a718d4736b8a5ff2ead6680a 983 SUPERFAMILY SSF46785 915 980 3.05E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS10980 95fa7a30a718d4736b8a5ff2ead6680a 983 Gene3D G3DSA:1.10.10.10 917 971 4.8E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS10980 95fa7a30a718d4736b8a5ff2ead6680a 983 SUPERFAMILY SSF52540 572 884 2.52E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS10980 95fa7a30a718d4736b8a5ff2ead6680a 983 SMART SM00843 915 980 2.2E-38 T 28-03-2018 IPR018541 FtsK gamma domain AL549_RS10980 95fa7a30a718d4736b8a5ff2ead6680a 983 Pfam PF09397 Ftsk gamma domain 917 977 1.1E-25 T 28-03-2018 IPR018541 FtsK gamma domain AL549_RS10980 95fa7a30a718d4736b8a5ff2ead6680a 983 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 199 6.9E-42 T 28-03-2018 IPR025199 DNA translocase FtsK, 4TM region AL549_RS10980 95fa7a30a718d4736b8a5ff2ead6680a 983 Pfam PF01580 FtsK/SpoIIIE family 598 811 1.2E-71 T 28-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AL549_RS09385 940f30ae28775c746310f97337b11f35 378 Gene3D G3DSA:3.20.20.140 69 347 6.2E-95 T 28-03-2018 AL549_RS09385 940f30ae28775c746310f97337b11f35 378 Pfam PF01979 Amidohydrolase family 51 374 3.2E-41 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL549_RS09385 940f30ae28775c746310f97337b11f35 378 PIRSF PIRSF038994 1 378 5.2E-123 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AL549_RS09385 940f30ae28775c746310f97337b11f35 378 SUPERFAMILY SSF51556 54 347 5.76E-102 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL549_RS09385 940f30ae28775c746310f97337b11f35 378 Gene3D G3DSA:2.30.40.10 2 68 6.1E-11 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS09385 940f30ae28775c746310f97337b11f35 378 SUPERFAMILY SSF51338 1 53 7.83E-19 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS09385 940f30ae28775c746310f97337b11f35 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 4.3E-156 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AL549_RS20160 40dbb25faf9c4e9830fb326eb59c0676 877 SUPERFAMILY SSF51621 6 877 0.0 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL549_RS20160 40dbb25faf9c4e9830fb326eb59c0676 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 3.9E-67 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL549_RS20160 40dbb25faf9c4e9830fb326eb59c0676 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 3.9E-67 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL549_RS20160 40dbb25faf9c4e9830fb326eb59c0676 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 3.9E-67 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL549_RS20160 40dbb25faf9c4e9830fb326eb59c0676 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 3.9E-67 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL549_RS20160 40dbb25faf9c4e9830fb326eb59c0676 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 3.9E-67 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL549_RS20160 40dbb25faf9c4e9830fb326eb59c0676 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 3.9E-67 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL549_RS20160 40dbb25faf9c4e9830fb326eb59c0676 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 3.9E-67 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL549_RS20160 40dbb25faf9c4e9830fb326eb59c0676 877 Gene3D G3DSA:1.20.1440.90 274 386 1.3E-24 T 28-03-2018 AL549_RS20160 40dbb25faf9c4e9830fb326eb59c0676 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 28-03-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL549_RS20160 40dbb25faf9c4e9830fb326eb59c0676 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 8.6E-288 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL549_RS20160 40dbb25faf9c4e9830fb326eb59c0676 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 17.935 T 28-03-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL549_RS20160 40dbb25faf9c4e9830fb326eb59c0676 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 28-03-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL549_RS02115 5e15f00e39a88b604a01b167d3096915 361 Pfam PF02698 DUF218 domain 189 309 3.4E-20 T 28-03-2018 IPR003848 Domain of unknown function DUF218 AL549_RS02115 5e15f00e39a88b604a01b167d3096915 361 SMART SM00028 91 124 0.008 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS02115 5e15f00e39a88b604a01b167d3096915 361 Gene3D G3DSA:1.25.40.10 73 182 4.1E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS02115 5e15f00e39a88b604a01b167d3096915 361 SUPERFAMILY SSF48452 82 144 2.53E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS02115 5e15f00e39a88b604a01b167d3096915 361 Gene3D G3DSA:3.40.50.620 183 319 1.4E-32 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS13860 31c7fa95feb1cfed27211ac6ad6294f0 50 Pfam PF11665 Protein of unknown function (DUF3265) 15 42 1.2E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS09335 4b5f4b23ca0adc2c2e4609a30c4df044 290 Pfam PF00486 Transcriptional regulatory protein, C terminal 32 107 1.8E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS09335 4b5f4b23ca0adc2c2e4609a30c4df044 290 SMART SM00862 29 107 5.1E-16 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS09335 4b5f4b23ca0adc2c2e4609a30c4df044 290 Gene3D G3DSA:1.10.10.10 5 114 1.8E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS09335 4b5f4b23ca0adc2c2e4609a30c4df044 290 SUPERFAMILY SSF46894 7 109 2.64E-18 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS19735 5f67a0760210b36bd363f1c153f3a570 481 SUPERFAMILY SSF111283 18 480 3.66E-127 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL549_RS19735 5f67a0760210b36bd363f1c153f3a570 481 Gene3D G3DSA:3.30.2290.10 17 240 8.3E-54 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain AL549_RS19735 5f67a0760210b36bd363f1c153f3a570 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 9.8E-65 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL549_RS19735 5f67a0760210b36bd363f1c153f3a570 481 PIRSF PIRSF004919 15 481 7.1E-142 T 28-03-2018 IPR025502 TldD AL549_RS02570 827d7d7e76d3ee5389994a2d12f1b6e6 175 SUPERFAMILY SSF55068 3 166 1.83E-70 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL549_RS02570 827d7d7e76d3ee5389994a2d12f1b6e6 175 Gene3D G3DSA:3.30.1060.10 2 172 2.6E-69 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL549_RS02570 827d7d7e76d3ee5389994a2d12f1b6e6 175 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 160 34.956 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL549_RS02570 827d7d7e76d3ee5389994a2d12f1b6e6 175 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 5 155 1.2E-56 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL549_RS02570 827d7d7e76d3ee5389994a2d12f1b6e6 175 Pfam PF01625 Peptide methionine sulfoxide reductase 6 155 1.1E-60 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL549_RS03890 7f121efa45681dc4fab1041acd2fbd08 253 Pfam PF13230 Glutamine amidotransferases class-II 25 197 8.2E-20 T 28-03-2018 IPR026869 Putative glutamine amidotransferase type 2 AL549_RS03890 7f121efa45681dc4fab1041acd2fbd08 253 SUPERFAMILY SSF56235 2 250 9.44E-34 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL549_RS03890 7f121efa45681dc4fab1041acd2fbd08 253 Gene3D G3DSA:3.60.20.10 1 251 3.7E-37 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL549_RS11750 4f98f8ab625c53b9f22b6018a9d04bb7 289 SUPERFAMILY SSF46785 1 86 1.47E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS11750 4f98f8ab625c53b9f22b6018a9d04bb7 289 Gene3D G3DSA:3.40.190.10 176 260 3.0E-13 T 28-03-2018 AL549_RS11750 4f98f8ab625c53b9f22b6018a9d04bb7 289 Pfam PF03466 LysR substrate binding domain 88 287 4.4E-44 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS11750 4f98f8ab625c53b9f22b6018a9d04bb7 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS11750 4f98f8ab625c53b9f22b6018a9d04bb7 289 SUPERFAMILY SSF53850 90 288 5.43E-40 T 28-03-2018 AL549_RS11750 4f98f8ab625c53b9f22b6018a9d04bb7 289 Gene3D G3DSA:1.10.10.10 1 83 5.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS11750 4f98f8ab625c53b9f22b6018a9d04bb7 289 Gene3D G3DSA:3.40.190.10 87 175 1.2E-22 T 28-03-2018 AL549_RS11750 4f98f8ab625c53b9f22b6018a9d04bb7 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS11750 4f98f8ab625c53b9f22b6018a9d04bb7 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS11750 4f98f8ab625c53b9f22b6018a9d04bb7 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS06625 da5587c7757aa7c8f5e7387f2985531b 377 SUPERFAMILY SSF56300 1 320 1.23E-58 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS06625 da5587c7757aa7c8f5e7387f2985531b 377 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 244 2.8E-54 T 28-03-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 AL549_RS06625 da5587c7757aa7c8f5e7387f2985531b 377 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 268 353 2.5E-10 T 28-03-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AL549_RS06625 da5587c7757aa7c8f5e7387f2985531b 377 Gene3D G3DSA:3.60.21.10 1 73 8.3E-16 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS06625 da5587c7757aa7c8f5e7387f2985531b 377 Gene3D G3DSA:3.60.21.10 74 267 7.0E-31 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS06625 da5587c7757aa7c8f5e7387f2985531b 377 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 1.2E-14 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL549_RS12700 a8cf2a461db67b270ed38f9c52f84afd 484 SUPERFAMILY SSF46689 367 474 9.41E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS12700 a8cf2a461db67b270ed38f9c52f84afd 484 Gene3D G3DSA:3.40.50.300 150 326 1.9E-30 T 28-03-2018 AL549_RS12700 a8cf2a461db67b270ed38f9c52f84afd 484 Pfam PF02954 Bacterial regulatory protein, Fis family 434 475 6.7E-8 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS12700 a8cf2a461db67b270ed38f9c52f84afd 484 Gene3D G3DSA:1.10.10.60 440 473 1.2E-10 T 28-03-2018 AL549_RS12700 a8cf2a461db67b270ed38f9c52f84afd 484 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL549_RS12700 a8cf2a461db67b270ed38f9c52f84afd 484 SUPERFAMILY SSF52172 16 197 7.26E-37 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS12700 a8cf2a461db67b270ed38f9c52f84afd 484 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL549_RS12700 a8cf2a461db67b270ed38f9c52f84afd 484 SUPERFAMILY SSF52540 154 384 5.32E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS12700 a8cf2a461db67b270ed38f9c52f84afd 484 SMART SM00448 16 127 1.6E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS12700 a8cf2a461db67b270ed38f9c52f84afd 484 Pfam PF00072 Response regulator receiver domain 18 128 4.3E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS12700 a8cf2a461db67b270ed38f9c52f84afd 484 Gene3D G3DSA:3.40.50.2300 8 140 5.4E-29 T 28-03-2018 AL549_RS12700 a8cf2a461db67b270ed38f9c52f84afd 484 Pfam PF00158 Sigma-54 interaction domain 155 321 6.9E-67 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL549_RS12700 a8cf2a461db67b270ed38f9c52f84afd 484 SMART SM00382 175 318 6.6E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS12700 a8cf2a461db67b270ed38f9c52f84afd 484 Gene3D G3DSA:1.10.8.60 327 439 4.5E-18 T 28-03-2018 AL549_RS02785 2a4ed54d674fd419a5788885c5dd1523 335 Pfam PF13515 Fusaric acid resistance protein-like 181 309 3.4E-7 T 28-03-2018 AL549_RS02785 2a4ed54d674fd419a5788885c5dd1523 335 Gene3D G3DSA:1.20.1250.20 4 164 8.8E-5 T 28-03-2018 AL549_RS02785 2a4ed54d674fd419a5788885c5dd1523 335 PIRSF PIRSF029594 1 329 1.0E-92 T 28-03-2018 IPR016926 Uncharacterised conserved protein UCP029594 AL549_RS02785 2a4ed54d674fd419a5788885c5dd1523 335 Pfam PF11168 Protein of unknown function (DUF2955) 3 141 8.4E-48 T 28-03-2018 IPR022604 Protein of unknown function DUF2955 AL549_RS21970 58c540174d0889c81d15ec41498a2729 365 SUPERFAMILY SSF54106 38 86 1.1E-6 T 28-03-2018 IPR018392 LysM domain AL549_RS21970 58c540174d0889c81d15ec41498a2729 365 Pfam PF01476 LysM domain 40 85 7.3E-12 T 28-03-2018 IPR018392 LysM domain AL549_RS21970 58c540174d0889c81d15ec41498a2729 365 Gene3D G3DSA:3.10.350.10 34 90 2.0E-14 T 28-03-2018 AL549_RS21970 58c540174d0889c81d15ec41498a2729 365 SMART SM00257 39 87 2.0E-4 T 28-03-2018 IPR018392 LysM domain AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 Gene3D G3DSA:3.30.390.30 335 462 6.9E-38 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.8E-41 T 28-03-2018 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 8.8E-41 T 28-03-2018 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 8.8E-41 T 28-03-2018 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 8.8E-41 T 28-03-2018 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 8.8E-41 T 28-03-2018 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 3.0E-149 T 28-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 SUPERFAMILY SSF55424 343 466 6.36E-39 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 2.7E-35 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 Gene3D G3DSA:3.50.50.60 238 334 3.8E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 6.7E-64 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 Gene3D G3DSA:1.10.287.990 39 107 2.8E-19 T 28-03-2018 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 Gene3D G3DSA:3.50.50.60 120 237 1.7E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 SUPERFAMILY SSF51905 1 322 9.72E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 PIRSF PIRSF000350 1 469 5.2E-82 T 28-03-2018 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 3.4E-68 T 28-03-2018 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 3.4E-68 T 28-03-2018 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 3.4E-68 T 28-03-2018 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 3.4E-68 T 28-03-2018 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 3.4E-68 T 28-03-2018 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 3.4E-68 T 28-03-2018 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.4E-68 T 28-03-2018 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.4E-68 T 28-03-2018 AL549_RS18875 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 3.4E-68 T 28-03-2018 AL549_RS11265 59084c24223d97bd9be14ee5d95a771b 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 4.0E-35 T 28-03-2018 IPR021284 Protein of unknown function DUF2750 AL549_RS16890 91523d6fb8cb00a59ab2ca51572ec2c8 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 3.5E-55 T 28-03-2018 IPR014094 Penicillin-binding protein activator LpoB AL549_RS16890 91523d6fb8cb00a59ab2ca51572ec2c8 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 6 187 2.9E-74 T 28-03-2018 IPR014094 Penicillin-binding protein activator LpoB AL549_RS16890 91523d6fb8cb00a59ab2ca51572ec2c8 196 Gene3D G3DSA:3.40.50.10070 59 194 8.2E-18 T 28-03-2018 AL549_RS17670 9893f94b78209468f7797bbb410d013a 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.794 T 28-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AL549_RS17670 9893f94b78209468f7797bbb410d013a 191 Pfam PF13580 SIS domain 25 146 1.2E-30 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL549_RS17670 9893f94b78209468f7797bbb410d013a 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 1.9E-82 T 28-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AL549_RS17670 9893f94b78209468f7797bbb410d013a 191 SUPERFAMILY SSF53697 1 189 1.48E-52 T 28-03-2018 AL549_RS17670 9893f94b78209468f7797bbb410d013a 191 Gene3D G3DSA:3.40.50.10490 1 191 4.5E-41 T 28-03-2018 AL549_RS07630 456a64bd71df59f87f31fab2c0eff6be 273 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 270 51.603 T 28-03-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 AL549_RS07630 456a64bd71df59f87f31fab2c0eff6be 273 Pfam PF01497 Periplasmic binding protein 24 245 4.7E-24 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL549_RS07630 456a64bd71df59f87f31fab2c0eff6be 273 Gene3D G3DSA:3.40.50.1980 21 140 9.6E-27 T 28-03-2018 AL549_RS07630 456a64bd71df59f87f31fab2c0eff6be 273 Gene3D G3DSA:3.40.50.1980 141 270 2.4E-24 T 28-03-2018 AL549_RS07630 456a64bd71df59f87f31fab2c0eff6be 273 SUPERFAMILY SSF53807 20 266 2.67E-57 T 28-03-2018 AL549_RS03720 c16e525664e2e08dd092ed0ceed074c1 281 SUPERFAMILY SSF50182 96 169 8.5E-11 T 28-03-2018 IPR010920 LSM domain AL549_RS03720 c16e525664e2e08dd092ed0ceed074c1 281 Pfam PF00924 Mechanosensitive ion channel 57 184 4.7E-17 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL549_RS03720 c16e525664e2e08dd092ed0ceed074c1 281 Gene3D G3DSA:2.30.30.60 111 170 3.2E-16 T 28-03-2018 AL549_RS12495 83aee72b43a5d678d768efaa3901b90a 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 447 7.9E-116 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS12495 83aee72b43a5d678d768efaa3901b90a 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 11 468 1.1E-229 T 28-03-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AL549_RS12495 83aee72b43a5d678d768efaa3901b90a 477 Gene3D G3DSA:1.20.210.10 5 475 3.8E-95 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS12495 83aee72b43a5d678d768efaa3901b90a 477 SUPERFAMILY SSF81442 11 469 1.09E-121 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS12495 83aee72b43a5d678d768efaa3901b90a 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 207 262 - T 28-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS00765 df296ab6e2aeba2dc3ef7a906ec2f61e 198 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 1 197 1.9E-62 T 28-03-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 AL549_RS00765 df296ab6e2aeba2dc3ef7a906ec2f61e 198 Gene3D G3DSA:3.40.1280.10 1 198 1.2E-25 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL549_RS00765 df296ab6e2aeba2dc3ef7a906ec2f61e 198 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 1 198 25.696 T 28-03-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 AL549_RS00765 df296ab6e2aeba2dc3ef7a906ec2f61e 198 SUPERFAMILY SSF75217 1 197 1.96E-62 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AL549_RS02375 024405343aa971244d5ccbb6f14e78cd 355 SUPERFAMILY SSF56281 35 290 1.09E-26 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS02375 024405343aa971244d5ccbb6f14e78cd 355 Gene3D G3DSA:3.60.15.10 1 338 6.9E-45 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS02375 024405343aa971244d5ccbb6f14e78cd 355 Pfam PF13483 Beta-lactamase superfamily domain 42 282 2.6E-12 T 28-03-2018 AL549_RS09505 ad41c838ca80040989c4f0af07907ca5 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 28-03-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AL549_RS09505 ad41c838ca80040989c4f0af07907ca5 290 Pfam PF00549 CoA-ligase 151 270 1.8E-21 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL549_RS09505 ad41c838ca80040989c4f0af07907ca5 290 Pfam PF02629 CoA binding domain 6 99 1.5E-31 T 28-03-2018 IPR003781 CoA-binding GO:0048037 AL549_RS09505 ad41c838ca80040989c4f0af07907ca5 290 Gene3D G3DSA:3.40.50.720 1 119 1.4E-45 T 28-03-2018 AL549_RS09505 ad41c838ca80040989c4f0af07907ca5 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 28-03-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AL549_RS09505 ad41c838ca80040989c4f0af07907ca5 290 SMART SM00881 4 100 3.3E-36 T 28-03-2018 IPR003781 CoA-binding GO:0048037 AL549_RS09505 ad41c838ca80040989c4f0af07907ca5 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.437 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL549_RS09505 ad41c838ca80040989c4f0af07907ca5 290 Gene3D G3DSA:3.40.50.261 120 289 2.2E-56 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL549_RS09505 ad41c838ca80040989c4f0af07907ca5 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.8E-40 T 28-03-2018 AL549_RS09505 ad41c838ca80040989c4f0af07907ca5 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.8E-40 T 28-03-2018 AL549_RS09505 ad41c838ca80040989c4f0af07907ca5 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.8E-40 T 28-03-2018 AL549_RS09505 ad41c838ca80040989c4f0af07907ca5 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.8E-40 T 28-03-2018 AL549_RS09505 ad41c838ca80040989c4f0af07907ca5 290 SUPERFAMILY SSF51735 1 122 2.89E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS09505 ad41c838ca80040989c4f0af07907ca5 290 PIRSF PIRSF001553 1 289 4.9E-135 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL549_RS09505 ad41c838ca80040989c4f0af07907ca5 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 9.9E-147 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL549_RS09505 ad41c838ca80040989c4f0af07907ca5 290 SUPERFAMILY SSF52210 123 286 2.88E-56 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL549_RS12680 291273155cc60f19d0706e5a6e98a52c 530 Pfam PF12848 ABC transporter 224 309 1.0E-21 T 28-03-2018 IPR032781 ABC-transporter extension domain AL549_RS12680 291273155cc60f19d0706e5a6e98a52c 530 Pfam PF00005 ABC transporter 337 466 1.3E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS12680 291273155cc60f19d0706e5a6e98a52c 530 Pfam PF00005 ABC transporter 18 184 2.5E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS12680 291273155cc60f19d0706e5a6e98a52c 530 Gene3D G3DSA:3.40.50.300 2 281 5.6E-51 T 28-03-2018 AL549_RS12680 291273155cc60f19d0706e5a6e98a52c 530 SUPERFAMILY SSF52540 334 517 4.04E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS12680 291273155cc60f19d0706e5a6e98a52c 530 Gene3D G3DSA:3.40.50.300 282 530 2.3E-46 T 28-03-2018 AL549_RS12680 291273155cc60f19d0706e5a6e98a52c 530 SUPERFAMILY SSF52540 7 237 2.62E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS12680 291273155cc60f19d0706e5a6e98a52c 530 SMART SM00382 343 511 1.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS12680 291273155cc60f19d0706e5a6e98a52c 530 SMART SM00382 26 238 3.7E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS23075 0390bacdb77e6a15c3a2c9fadd30a49a 446 Pfam PF10996 Beta-Casp domain 248 378 4.3E-27 T 28-03-2018 IPR022712 Beta-Casp domain AL549_RS23075 0390bacdb77e6a15c3a2c9fadd30a49a 446 Pfam PF00753 Metallo-beta-lactamase superfamily 16 194 2.1E-13 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS23075 0390bacdb77e6a15c3a2c9fadd30a49a 446 SUPERFAMILY SSF56281 1 442 2.03E-121 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS23075 0390bacdb77e6a15c3a2c9fadd30a49a 446 SMART SM01027 248 378 5.1E-54 T 28-03-2018 IPR022712 Beta-Casp domain AL549_RS23075 0390bacdb77e6a15c3a2c9fadd30a49a 446 Gene3D G3DSA:3.60.15.10 1 268 8.5E-49 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS23075 0390bacdb77e6a15c3a2c9fadd30a49a 446 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 392 443 4.6E-14 T 28-03-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AL549_RS23075 0390bacdb77e6a15c3a2c9fadd30a49a 446 SMART SM00849 13 232 5.9E-15 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS20275 5bdd14f36f4376b540ff541a412e493a 158 SUPERFAMILY SSF47240 1 153 4.06E-55 T 28-03-2018 IPR009078 Ferritin-like superfamily AL549_RS20275 5bdd14f36f4376b540ff541a412e493a 158 PIRSF PIRSF002560 1 157 2.5E-73 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL549_RS20275 5bdd14f36f4376b540ff541a412e493a 158 Gene3D G3DSA:1.20.5.420 85 139 3.7E-25 T 28-03-2018 AL549_RS20275 5bdd14f36f4376b540ff541a412e493a 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL549_RS20275 5bdd14f36f4376b540ff541a412e493a 158 Gene3D G3DSA:1.20.1260.10 1 78 5.6E-16 T 28-03-2018 IPR012347 Ferritin-related AL549_RS20275 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 23 43 3.0E-72 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL549_RS20275 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 3 22 3.0E-72 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL549_RS20275 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 65 85 3.0E-72 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL549_RS20275 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 86 106 3.0E-72 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL549_RS20275 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 107 127 3.0E-72 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL549_RS20275 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 44 64 3.0E-72 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL549_RS20275 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 128 149 3.0E-72 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL549_RS20275 5bdd14f36f4376b540ff541a412e493a 158 Pfam PF00210 Ferritin-like domain 8 143 1.8E-39 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AL549_RS20275 5bdd14f36f4376b540ff541a412e493a 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 1.7E-82 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL549_RS08865 be6c1d2c1bec3886a272c809d4e3ae73 506 Pfam PF00795 Carbon-nitrogen hydrolase 221 470 1.8E-37 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL549_RS08865 be6c1d2c1bec3886a272c809d4e3ae73 506 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.959 T 28-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AL549_RS08865 be6c1d2c1bec3886a272c809d4e3ae73 506 SUPERFAMILY SSF56317 214 486 1.44E-43 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL549_RS08865 be6c1d2c1bec3886a272c809d4e3ae73 506 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 453 7.0E-99 T 28-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AL549_RS08865 be6c1d2c1bec3886a272c809d4e3ae73 506 Gene3D G3DSA:3.60.110.10 217 484 1.5E-40 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL549_RS09770 d0696f051edc776f34a719391eb59391 544 Gene3D G3DSA:1.10.287.950 40 310 2.2E-5 T 28-03-2018 AL549_RS09770 d0696f051edc776f34a719391eb59391 544 Pfam PF00672 HAMP domain 215 263 1.0E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS09770 d0696f051edc776f34a719391eb59391 544 SMART SM00283 282 543 3.3E-81 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS09770 d0696f051edc776f34a719391eb59391 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 507 9.3E-44 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS09770 d0696f051edc776f34a719391eb59391 544 Gene3D G3DSA:1.10.287.950 311 515 2.2E-50 T 28-03-2018 AL549_RS09770 d0696f051edc776f34a719391eb59391 544 SUPERFAMILY SSF58104 235 544 1.83E-75 T 28-03-2018 AL549_RS09770 d0696f051edc776f34a719391eb59391 544 SMART SM00304 213 267 2.2E-12 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS09770 d0696f051edc776f34a719391eb59391 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 407 1.4E-24 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS09770 d0696f051edc776f34a719391eb59391 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 15 40 1.4E-24 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS09770 d0696f051edc776f34a719391eb59391 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 409 438 1.4E-24 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS09770 d0696f051edc776f34a719391eb59391 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 457 486 1.4E-24 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS11380 45002ae97ec47116ee28f1849560d895 509 Gene3D G3DSA:1.10.10.60 467 509 3.8E-9 T 28-03-2018 AL549_RS11380 45002ae97ec47116ee28f1849560d895 509 Gene3D G3DSA:1.10.8.60 367 466 2.4E-19 T 28-03-2018 AL549_RS11380 45002ae97ec47116ee28f1849560d895 509 Pfam PF02954 Bacterial regulatory protein, Fis family 469 500 1.1E-4 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS11380 45002ae97ec47116ee28f1849560d895 509 Gene3D G3DSA:3.40.50.300 189 366 9.0E-27 T 28-03-2018 AL549_RS11380 45002ae97ec47116ee28f1849560d895 509 SUPERFAMILY SSF55781 7 166 3.71E-17 T 28-03-2018 IPR029016 GAF domain-like AL549_RS11380 45002ae97ec47116ee28f1849560d895 509 SUPERFAMILY SSF46689 459 507 8.96E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS11380 45002ae97ec47116ee28f1849560d895 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL549_RS11380 45002ae97ec47116ee28f1849560d895 509 SMART SM00382 214 358 1.4E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS11380 45002ae97ec47116ee28f1849560d895 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL549_RS11380 45002ae97ec47116ee28f1849560d895 509 Gene3D G3DSA:3.30.450.40 3 177 3.0E-18 T 28-03-2018 IPR029016 GAF domain-like AL549_RS11380 45002ae97ec47116ee28f1849560d895 509 SMART SM00065 21 170 2.0E-4 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL549_RS11380 45002ae97ec47116ee28f1849560d895 509 SUPERFAMILY SSF52540 193 430 1.13E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11380 45002ae97ec47116ee28f1849560d895 509 Pfam PF00158 Sigma-54 interaction domain 195 361 8.9E-70 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL549_RS01675 565105910f03e3f89cf010dc029f8bbb 393 Pfam PF08238 Sel1 repeat 139 170 5.9 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS01675 565105910f03e3f89cf010dc029f8bbb 393 Pfam PF08238 Sel1 repeat 80 97 0.49 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS01675 565105910f03e3f89cf010dc029f8bbb 393 Pfam PF08238 Sel1 repeat 172 206 4.7E-4 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS01675 565105910f03e3f89cf010dc029f8bbb 393 Pfam PF08238 Sel1 repeat 209 242 1.0E-5 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS01675 565105910f03e3f89cf010dc029f8bbb 393 SMART SM00671 135 170 0.075 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS01675 565105910f03e3f89cf010dc029f8bbb 393 SMART SM00671 171 206 0.0043 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS01675 565105910f03e3f89cf010dc029f8bbb 393 SMART SM00671 207 242 4.1E-5 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS01675 565105910f03e3f89cf010dc029f8bbb 393 Gene3D G3DSA:2.60.40.1180 198 288 3.2E-12 T 28-03-2018 AL549_RS01675 565105910f03e3f89cf010dc029f8bbb 393 Gene3D G3DSA:2.60.40.1180 113 197 4.0E-12 T 28-03-2018 AL549_RS01675 565105910f03e3f89cf010dc029f8bbb 393 Gene3D G3DSA:2.60.40.1180 71 110 0.19 T 28-03-2018 AL549_RS01675 565105910f03e3f89cf010dc029f8bbb 393 SUPERFAMILY SSF81901 79 283 7.24E-30 T 28-03-2018 AL549_RS17695 a4f65ff7a63bb7b70bcbdc81ecb755dc 649 Pfam PF02254 TrkA-N domain 422 535 2.9E-23 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL549_RS17695 a4f65ff7a63bb7b70bcbdc81ecb755dc 649 Gene3D G3DSA:1.20.91.10 248 333 2.1E-10 T 28-03-2018 AL549_RS17695 a4f65ff7a63bb7b70bcbdc81ecb755dc 649 SUPERFAMILY SSF51735 421 547 1.05E-30 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS17695 a4f65ff7a63bb7b70bcbdc81ecb755dc 649 Gene3D G3DSA:3.40.50.720 416 579 8.5E-18 T 28-03-2018 AL549_RS17695 a4f65ff7a63bb7b70bcbdc81ecb755dc 649 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 7.1E-58 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL549_RS17695 a4f65ff7a63bb7b70bcbdc81ecb755dc 649 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 303 2.2E-74 T 28-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 Gene3D G3DSA:2.60.40.10 601 707 2.8E-17 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 Gene3D G3DSA:2.70.98.10 711 1000 9.1E-89 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 SUPERFAMILY SSF49303 613 706 3.41E-19 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 Pfam PF16353 Domain of unknown function(DUF4981) 616 700 5.0E-13 T 28-03-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 Gene3D G3DSA:3.20.20.80 320 600 3.9E-67 T 28-03-2018 AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 Pfam PF02929 Beta galactosidase small chain 730 998 5.8E-71 T 28-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 Pfam PF00703 Glycosyl hydrolases family 2 209 319 7.2E-18 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 330 344 7.1E-32 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 361 379 7.1E-32 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 7.1E-32 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 507 522 7.1E-32 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 436 451 7.1E-32 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 321 605 4.9E-114 T 28-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 SMART SM01038 728 999 8.6E-129 T 28-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 371 396 - T 28-03-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 436 450 - T 28-03-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 44 207 3.7E-48 T 28-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 Gene3D G3DSA:2.60.40.10 209 319 8.8E-24 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 SUPERFAMILY SSF51445 321 599 1.1E-83 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 SUPERFAMILY SSF49785 2 206 1.7E-62 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 SUPERFAMILY SSF74650 715 1001 9.94E-88 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 Gene3D G3DSA:2.60.120.260 1 206 7.1E-61 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS18260 f2e6d8513919efb41626e703d0a0be03 1032 SUPERFAMILY SSF49303 209 319 8.84E-25 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AL549_RS04155 84419ca3eb7b7d6a19e4282526875f81 571 PIRSF PIRSF003167 298 570 1.4E-101 T 28-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL549_RS04155 84419ca3eb7b7d6a19e4282526875f81 571 PIRSF PIRSF003167 2 311 2.7E-76 T 28-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL549_RS04155 84419ca3eb7b7d6a19e4282526875f81 571 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 562 1.3E-8 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS04155 84419ca3eb7b7d6a19e4282526875f81 571 Pfam PF07730 Histidine kinase 365 433 6.1E-17 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AL549_RS04155 84419ca3eb7b7d6a19e4282526875f81 571 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 35 129 7.3E-23 T 28-03-2018 IPR029095 NarX-like, N-terminal AL549_RS04155 84419ca3eb7b7d6a19e4282526875f81 571 Pfam PF00672 HAMP domain 176 223 2.8E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS04155 84419ca3eb7b7d6a19e4282526875f81 571 SMART SM00304 176 228 1.9E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS04155 84419ca3eb7b7d6a19e4282526875f81 571 Gene3D G3DSA:3.30.565.10 434 570 2.7E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS04155 84419ca3eb7b7d6a19e4282526875f81 571 SUPERFAMILY SSF158472 176 225 8.63E-8 T 28-03-2018 AL549_RS04155 84419ca3eb7b7d6a19e4282526875f81 571 SMART SM00387 474 567 3.9E-9 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS04155 84419ca3eb7b7d6a19e4282526875f81 571 SUPERFAMILY SSF55874 445 561 1.7E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS21180 07e0665d46eca0b50609509aab6d6acc 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 282 7.9E-126 T 28-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AL549_RS21180 07e0665d46eca0b50609509aab6d6acc 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 279 5.3E-34 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS21180 07e0665d46eca0b50609509aab6d6acc 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 1.5E-18 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS21180 07e0665d46eca0b50609509aab6d6acc 285 PRINTS PR00046 Major sigma-70 factor signature 267 278 1.5E-18 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS21180 07e0665d46eca0b50609509aab6d6acc 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 1.5E-18 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS21180 07e0665d46eca0b50609509aab6d6acc 285 PRINTS PR00046 Major sigma-70 factor signature 252 267 1.5E-18 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS21180 07e0665d46eca0b50609509aab6d6acc 285 Pfam PF04545 Sigma-70, region 4 229 279 9.1E-16 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS21180 07e0665d46eca0b50609509aab6d6acc 285 Gene3D G3DSA:1.10.601.10 4 122 2.9E-34 T 28-03-2018 AL549_RS21180 07e0665d46eca0b50609509aab6d6acc 285 Gene3D G3DSA:1.10.10.10 142 178 0.33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21180 07e0665d46eca0b50609509aab6d6acc 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS21180 07e0665d46eca0b50609509aab6d6acc 285 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 7.7E-7 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS21180 07e0665d46eca0b50609509aab6d6acc 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 53.016 T 28-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AL549_RS21180 07e0665d46eca0b50609509aab6d6acc 285 SUPERFAMILY SSF88659 199 281 8.78E-19 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS21180 07e0665d46eca0b50609509aab6d6acc 285 Gene3D G3DSA:1.10.10.10 223 284 2.0E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21180 07e0665d46eca0b50609509aab6d6acc 285 SUPERFAMILY SSF88946 11 122 2.22E-39 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS21180 07e0665d46eca0b50609509aab6d6acc 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS21180 07e0665d46eca0b50609509aab6d6acc 285 Pfam PF04542 Sigma-70 region 2 53 122 6.4E-17 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS06120 ad3e280afcc330d07b0ffc9591688e2f 207 SUPERFAMILY SSF47413 26 90 2.95E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS06120 ad3e280afcc330d07b0ffc9591688e2f 207 SMART SM00530 31 86 4.2E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL549_RS06120 ad3e280afcc330d07b0ffc9591688e2f 207 Gene3D G3DSA:2.60.120.10 119 207 3.9E-12 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS06120 ad3e280afcc330d07b0ffc9591688e2f 207 Pfam PF07883 Cupin domain 146 204 1.6E-10 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL549_RS06120 ad3e280afcc330d07b0ffc9591688e2f 207 Pfam PF01381 Helix-turn-helix 32 84 5.7E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL549_RS06120 ad3e280afcc330d07b0ffc9591688e2f 207 Gene3D G3DSA:1.10.260.40 11 118 3.3E-17 T 28-03-2018 AL549_RS06120 ad3e280afcc330d07b0ffc9591688e2f 207 SUPERFAMILY SSF51182 97 204 1.06E-24 T 28-03-2018 IPR011051 RmlC-like cupin domain AL549_RS12590 e65c4a5c2ef268835d7e23c534a2c492 345 PIRSF PIRSF019574 1 345 4.1E-123 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12590 e65c4a5c2ef268835d7e23c534a2c492 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 310 1.7E-40 T 28-03-2018 AL549_RS12590 e65c4a5c2ef268835d7e23c534a2c492 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 2.8E-86 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12590 e65c4a5c2ef268835d7e23c534a2c492 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 2.8E-86 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12590 e65c4a5c2ef268835d7e23c534a2c492 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 2.8E-86 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12590 e65c4a5c2ef268835d7e23c534a2c492 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 2.8E-86 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12590 e65c4a5c2ef268835d7e23c534a2c492 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 2.8E-86 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12590 e65c4a5c2ef268835d7e23c534a2c492 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 2.8E-86 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12590 e65c4a5c2ef268835d7e23c534a2c492 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 2.8E-86 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12590 e65c4a5c2ef268835d7e23c534a2c492 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 2.8E-86 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12590 e65c4a5c2ef268835d7e23c534a2c492 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 2.8E-86 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12590 e65c4a5c2ef268835d7e23c534a2c492 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 2.8E-86 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12590 e65c4a5c2ef268835d7e23c534a2c492 345 SUPERFAMILY SSF53850 24 342 1.58E-92 T 28-03-2018 AL549_RS12590 e65c4a5c2ef268835d7e23c534a2c492 345 Gene3D G3DSA:3.40.190.10 17 187 1.9E-36 T 28-03-2018 AL549_RS12590 e65c4a5c2ef268835d7e23c534a2c492 345 Gene3D G3DSA:3.40.190.10 188 311 1.5E-18 T 28-03-2018 AL549_RS05615 2da87d29183d030cf75f9657ddc541ad 228 SUPERFAMILY SSF161098 6 218 6.41E-48 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS05615 2da87d29183d030cf75f9657ddc541ad 228 Gene3D G3DSA:1.10.3720.10 5 226 7.0E-35 T 28-03-2018 AL549_RS05615 2da87d29183d030cf75f9657ddc541ad 228 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 219 5.9E-71 T 28-03-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 AL549_RS05615 2da87d29183d030cf75f9657ddc541ad 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 27 218 5.9E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS17830 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 SUPERFAMILY SSF53633 7 240 1.31E-72 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL549_RS17830 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 Pfam PF00696 Amino acid kinase family 11 219 6.7E-27 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL549_RS17830 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.126 T 28-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AL549_RS17830 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 4.6E-102 T 28-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AL549_RS17830 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 PIRSF PIRSF005650 4 241 1.4E-88 T 28-03-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 AL549_RS17830 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 Gene3D G3DSA:3.40.1160.10 2 241 2.2E-43 T 28-03-2018 AL549_RS14520 08a6f6c9dc6fc20f97407576207e6bb5 120 PIRSF PIRSF039020 1 120 3.5E-34 T 28-03-2018 IPR026275 Glyoxalase/dioxygenase/EhpR AL549_RS14520 08a6f6c9dc6fc20f97407576207e6bb5 120 SUPERFAMILY SSF54593 1 118 8.74E-17 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS14520 08a6f6c9dc6fc20f97407576207e6bb5 120 Gene3D G3DSA:3.10.180.10 1 119 2.1E-13 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS14520 08a6f6c9dc6fc20f97407576207e6bb5 120 Pfam PF12681 Glyoxalase-like domain 6 117 5.3E-8 T 28-03-2018 IPR025870 Glyoxalase-like domain AL549_RS12230 0ec071dfc96fe2e63ac63370b715b153 130 Gene3D G3DSA:3.40.50.300 6 129 6.8E-18 T 28-03-2018 AL549_RS12230 0ec071dfc96fe2e63ac63370b715b153 130 Pfam PF13671 AAA domain 7 107 7.6E-21 T 28-03-2018 AL549_RS12230 0ec071dfc96fe2e63ac63370b715b153 130 SUPERFAMILY SSF52540 5 130 1.26E-14 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS05425 49681120babc250f0322a5b3b91ccce7 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 16 224 9.3E-50 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL549_RS05425 49681120babc250f0322a5b3b91ccce7 252 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 13 246 3.1E-94 T 28-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL549_RS05425 49681120babc250f0322a5b3b91ccce7 252 Gene3D G3DSA:3.30.950.10 138 252 3.5E-36 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL549_RS05425 49681120babc250f0322a5b3b91ccce7 252 SUPERFAMILY SSF53790 12 252 4.32E-79 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL549_RS05425 49681120babc250f0322a5b3b91ccce7 252 Gene3D G3DSA:3.40.1010.10 13 137 4.5E-37 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL549_RS05425 49681120babc250f0322a5b3b91ccce7 252 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 18 32 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL549_RS05425 49681120babc250f0322a5b3b91ccce7 252 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 93 126 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL549_RS09225 c1eb78bf81473d36bfb1797749fac167 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.5E-20 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL549_RS09225 c1eb78bf81473d36bfb1797749fac167 574 Gene3D G3DSA:3.50.30.10 132 254 1.6E-27 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL549_RS09225 c1eb78bf81473d36bfb1797749fac167 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 2.6E-30 T 28-03-2018 AL549_RS09225 c1eb78bf81473d36bfb1797749fac167 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.6E-30 T 28-03-2018 AL549_RS09225 c1eb78bf81473d36bfb1797749fac167 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 2.6E-30 T 28-03-2018 AL549_RS09225 c1eb78bf81473d36bfb1797749fac167 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 2.6E-30 T 28-03-2018 AL549_RS09225 c1eb78bf81473d36bfb1797749fac167 574 SUPERFAMILY SSF47831 24 143 8.89E-33 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL549_RS09225 c1eb78bf81473d36bfb1797749fac167 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 5.1E-32 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL549_RS09225 c1eb78bf81473d36bfb1797749fac167 574 Gene3D G3DSA:3.20.20.60 255 573 1.9E-103 T 28-03-2018 AL549_RS09225 c1eb78bf81473d36bfb1797749fac167 574 Gene3D G3DSA:1.10.274.10 24 131 2.7E-35 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL549_RS09225 c1eb78bf81473d36bfb1797749fac167 574 SUPERFAMILY SSF52009 125 243 9.29E-35 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL549_RS09225 c1eb78bf81473d36bfb1797749fac167 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 5.4E-124 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AL549_RS09225 c1eb78bf81473d36bfb1797749fac167 574 PIRSF PIRSF000732 1 574 9.2E-220 T 28-03-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 AL549_RS09225 c1eb78bf81473d36bfb1797749fac167 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 3.5E-247 T 28-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AL549_RS09225 c1eb78bf81473d36bfb1797749fac167 574 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AL549_RS09225 c1eb78bf81473d36bfb1797749fac167 574 SUPERFAMILY SSF51621 249 549 4.45E-110 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL549_RS09225 c1eb78bf81473d36bfb1797749fac167 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AL549_RS22110 147aa3ff809e3a44387eaae85533a97c 313 Pfam PF03466 LysR substrate binding domain 97 307 6.9E-31 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS22110 147aa3ff809e3a44387eaae85533a97c 313 SUPERFAMILY SSF53850 92 307 9.59E-50 T 28-03-2018 AL549_RS22110 147aa3ff809e3a44387eaae85533a97c 313 Gene3D G3DSA:1.10.10.10 1 88 7.4E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS22110 147aa3ff809e3a44387eaae85533a97c 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 5.4E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS22110 147aa3ff809e3a44387eaae85533a97c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS22110 147aa3ff809e3a44387eaae85533a97c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS22110 147aa3ff809e3a44387eaae85533a97c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS22110 147aa3ff809e3a44387eaae85533a97c 313 Gene3D G3DSA:3.40.190.10 96 191 9.8E-11 T 28-03-2018 AL549_RS22110 147aa3ff809e3a44387eaae85533a97c 313 SUPERFAMILY SSF46785 7 86 1.69E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS22110 147aa3ff809e3a44387eaae85533a97c 313 Gene3D G3DSA:3.40.190.10 192 281 1.1E-15 T 28-03-2018 AL549_RS09005 10730ca2cb1a85e0814ea4b0fc3a007a 362 Gene3D G3DSA:1.20.58.410 2 97 8.4E-21 T 28-03-2018 AL549_RS09005 10730ca2cb1a85e0814ea4b0fc3a007a 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.526 T 28-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AL549_RS09005 10730ca2cb1a85e0814ea4b0fc3a007a 362 Pfam PF03462 PCRF domain 13 205 8.6E-76 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 AL549_RS09005 10730ca2cb1a85e0814ea4b0fc3a007a 362 SMART SM00937 67 180 3.4E-67 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 AL549_RS09005 10730ca2cb1a85e0814ea4b0fc3a007a 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AL549_RS09005 10730ca2cb1a85e0814ea4b0fc3a007a 362 Gene3D G3DSA:3.30.160.20 211 293 1.1E-32 T 28-03-2018 AL549_RS09005 10730ca2cb1a85e0814ea4b0fc3a007a 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 1.9E-170 T 28-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AL549_RS09005 10730ca2cb1a85e0814ea4b0fc3a007a 362 SUPERFAMILY SSF75620 12 355 4.84E-137 T 28-03-2018 AL549_RS09005 10730ca2cb1a85e0814ea4b0fc3a007a 362 Pfam PF00472 RF-1 domain 218 323 5.2E-39 T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AL549_RS10085 63f4112602ee6427da5435c0e82ede25 279 Pfam PF11207 Protein of unknown function (DUF2989) 23 225 1.9E-75 T 28-03-2018 IPR021372 Protein of unknown function DUF2989 AL549_RS10110 55ee924ce7b2227c8e0aa93d4f4c60cb 182 Gene3D G3DSA:3.40.109.10 1 182 2.5E-31 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL549_RS10110 55ee924ce7b2227c8e0aa93d4f4c60cb 182 PIRSF PIRSF000232 1 182 8.9E-62 T 28-03-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AL549_RS10110 55ee924ce7b2227c8e0aa93d4f4c60cb 182 Pfam PF00881 Nitroreductase family 8 161 1.6E-22 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL549_RS10110 55ee924ce7b2227c8e0aa93d4f4c60cb 182 SUPERFAMILY SSF55469 1 181 4.58E-39 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL549_RS16870 17b88ffbe500f53397c96d3538f09e14 182 SUPERFAMILY SSF55729 3 177 8.83E-45 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS16870 17b88ffbe500f53397c96d3538f09e14 182 Gene3D G3DSA:3.40.630.30 3 182 1.6E-27 T 28-03-2018 AL549_RS16870 17b88ffbe500f53397c96d3538f09e14 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 5.2E-23 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS09400 7a64a9d8d04bc5508b2c0936367a40c9 149 Pfam PF01475 Ferric uptake regulator family 11 130 1.3E-46 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AL549_RS09400 7a64a9d8d04bc5508b2c0936367a40c9 149 Gene3D G3DSA:1.10.10.10 4 88 1.1E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS09400 7a64a9d8d04bc5508b2c0936367a40c9 149 SUPERFAMILY SSF46785 5 135 2.05E-43 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS12190 0d8cce7408e62f63edb043b0d4ca6c4a 501 SUPERFAMILY SSF55347 182 490 5.23E-113 T 28-03-2018 AL549_RS12190 0d8cce7408e62f63edb043b0d4ca6c4a 501 PIRSF PIRSF000110 2 490 2.5E-176 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL549_RS12190 0d8cce7408e62f63edb043b0d4ca6c4a 501 Gene3D G3DSA:3.30.360.10 194 489 5.5E-125 T 28-03-2018 AL549_RS12190 0d8cce7408e62f63edb043b0d4ca6c4a 501 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 7 487 2.1E-202 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL549_RS12190 0d8cce7408e62f63edb043b0d4ca6c4a 501 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 11 192 3.8E-63 T 28-03-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL549_RS12190 0d8cce7408e62f63edb043b0d4ca6c4a 501 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 194 487 1.7E-114 T 28-03-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL549_RS12190 0d8cce7408e62f63edb043b0d4ca6c4a 501 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 7 488 84.326 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL549_RS12190 0d8cce7408e62f63edb043b0d4ca6c4a 501 SUPERFAMILY SSF51735 4 195 2.23E-61 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS12190 0d8cce7408e62f63edb043b0d4ca6c4a 501 Gene3D G3DSA:3.40.50.720 5 193 8.1E-69 T 28-03-2018 AL549_RS12190 0d8cce7408e62f63edb043b0d4ca6c4a 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 224 241 3.4E-49 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL549_RS12190 0d8cce7408e62f63edb043b0d4ca6c4a 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 333 359 3.4E-49 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL549_RS12190 0d8cce7408e62f63edb043b0d4ca6c4a 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 242 258 3.4E-49 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL549_RS12190 0d8cce7408e62f63edb043b0d4ca6c4a 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 148 161 3.4E-49 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL549_RS12190 0d8cce7408e62f63edb043b0d4ca6c4a 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 172 200 3.4E-49 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL549_RS12190 0d8cce7408e62f63edb043b0d4ca6c4a 501 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 182 188 - T 28-03-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL549_RS16515 570fe12699a77bd8a65128b7949e5900 323 Gene3D G3DSA:3.40.50.150 79 323 6.9E-23 T 28-03-2018 AL549_RS16515 570fe12699a77bd8a65128b7949e5900 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 54.385 T 28-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AL549_RS16515 570fe12699a77bd8a65128b7949e5900 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 1.0E-172 T 28-03-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like AL549_RS16515 570fe12699a77bd8a65128b7949e5900 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 12 321 1.2E-146 T 28-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AL549_RS16515 570fe12699a77bd8a65128b7949e5900 323 SUPERFAMILY SSF53335 91 323 3.14E-32 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS08650 d610dce020cf2bff8cc86c2f3e681e50 322 PIRSF PIRSF005303 1 320 5.0E-83 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AL549_RS08650 d610dce020cf2bff8cc86c2f3e681e50 322 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 317 29.154 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AL549_RS08650 d610dce020cf2bff8cc86c2f3e681e50 322 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 5.3E-104 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AL549_RS08650 d610dce020cf2bff8cc86c2f3e681e50 322 SUPERFAMILY SSF55326 3 137 9.16E-33 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL549_RS08650 d610dce020cf2bff8cc86c2f3e681e50 322 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 4.4E-21 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL549_RS08650 d610dce020cf2bff8cc86c2f3e681e50 322 Gene3D G3DSA:3.90.650.10 144 320 3.8E-40 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL549_RS08650 d610dce020cf2bff8cc86c2f3e681e50 322 Gene3D G3DSA:3.30.1330.10 1 143 1.2E-33 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL549_RS08650 d610dce020cf2bff8cc86c2f3e681e50 322 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 297 1.4E-10 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL549_RS08650 d610dce020cf2bff8cc86c2f3e681e50 322 SUPERFAMILY SSF56042 141 303 1.24E-35 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL549_RS09780 751f7f4d65f40a2f6dd6b328a7ac05d5 242 SUPERFAMILY SSF52172 5 129 2.56E-40 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS09780 751f7f4d65f40a2f6dd6b328a7ac05d5 242 SMART SM00862 158 234 1.6E-12 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS09780 751f7f4d65f40a2f6dd6b328a7ac05d5 242 Gene3D G3DSA:3.40.50.2300 1 129 8.3E-37 T 28-03-2018 AL549_RS09780 751f7f4d65f40a2f6dd6b328a7ac05d5 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 9.8E-15 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS09780 751f7f4d65f40a2f6dd6b328a7ac05d5 242 SMART SM00448 5 116 4.9E-42 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS09780 751f7f4d65f40a2f6dd6b328a7ac05d5 242 Pfam PF00072 Response regulator receiver domain 7 117 2.1E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS09780 751f7f4d65f40a2f6dd6b328a7ac05d5 242 Gene3D G3DSA:1.10.10.10 130 240 3.0E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS09780 751f7f4d65f40a2f6dd6b328a7ac05d5 242 SUPERFAMILY SSF46894 135 235 8.22E-21 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS02850 7472a4d0f1e94808e9938542c8f46860 115 Pfam PF11777 Protein of unknown function (DUF3316) 2 110 1.9E-24 T 28-03-2018 IPR016879 Uncharacterised conserved protein UCP028299 AL549_RS02850 7472a4d0f1e94808e9938542c8f46860 115 PIRSF PIRSF028299 1 114 4.5E-44 T 28-03-2018 IPR016879 Uncharacterised conserved protein UCP028299 AL549_RS02465 d669d698405b8168d3e8a48812548baf 336 Gene3D G3DSA:1.10.260.40 2 57 2.0E-19 T 28-03-2018 AL549_RS02465 d669d698405b8168d3e8a48812548baf 336 Pfam PF13377 Periplasmic binding protein-like domain 168 329 3.3E-34 T 28-03-2018 AL549_RS02465 d669d698405b8168d3e8a48812548baf 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 5.0E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS02465 d669d698405b8168d3e8a48812548baf 336 Gene3D G3DSA:3.40.50.2300 58 167 6.1E-27 T 28-03-2018 AL549_RS02465 d669d698405b8168d3e8a48812548baf 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.4E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS02465 d669d698405b8168d3e8a48812548baf 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.4E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS02465 d669d698405b8168d3e8a48812548baf 336 SUPERFAMILY SSF53822 61 331 1.65E-81 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS02465 d669d698405b8168d3e8a48812548baf 336 SMART SM00354 1 71 3.1E-26 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS02465 d669d698405b8168d3e8a48812548baf 336 Gene3D G3DSA:3.40.50.2300 168 332 2.8E-47 T 28-03-2018 AL549_RS02465 d669d698405b8168d3e8a48812548baf 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 AL549_RS02465 d669d698405b8168d3e8a48812548baf 336 SUPERFAMILY SSF47413 2 58 4.29E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS11720 b7bc2bd6673fe865f04dd4fd61fe7a14 342 Gene3D G3DSA:3.40.630.10 45 310 1.1E-18 T 28-03-2018 AL549_RS11720 b7bc2bd6673fe865f04dd4fd61fe7a14 342 SUPERFAMILY SSF53187 9 329 2.0E-75 T 28-03-2018 AL549_RS11720 b7bc2bd6673fe865f04dd4fd61fe7a14 342 PIRSF PIRSF017020 4 336 6.0E-124 T 28-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AL549_RS11720 b7bc2bd6673fe865f04dd4fd61fe7a14 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 134.773 T 28-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AL549_RS11720 b7bc2bd6673fe865f04dd4fd61fe7a14 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 5.4E-74 T 28-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL549_RS17310 8dbba885c9ef2bb461a46c046b3418e8 404 Gene3D G3DSA:1.25.40.10 149 298 6.0E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS17310 8dbba885c9ef2bb461a46c046b3418e8 404 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 116 5.1E-32 T 28-03-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI AL549_RS17310 8dbba885c9ef2bb461a46c046b3418e8 404 Pfam PF14559 Tetratricopeptide repeat 176 244 3.5E-8 T 28-03-2018 AL549_RS17310 8dbba885c9ef2bb461a46c046b3418e8 404 SUPERFAMILY SSF48452 161 266 2.6E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS20465 bc601cfc77b77aa3fcf0f5182e59e127 211 SMART SM00671 144 179 22.0 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS20465 bc601cfc77b77aa3fcf0f5182e59e127 211 SMART SM00671 72 107 0.0067 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS20465 bc601cfc77b77aa3fcf0f5182e59e127 211 SMART SM00671 108 143 2.9E-6 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS20465 bc601cfc77b77aa3fcf0f5182e59e127 211 Gene3D G3DSA:2.60.40.1180 121 211 1.0E-14 T 28-03-2018 AL549_RS20465 bc601cfc77b77aa3fcf0f5182e59e127 211 Gene3D G3DSA:2.60.40.1180 44 120 2.8E-11 T 28-03-2018 AL549_RS20465 bc601cfc77b77aa3fcf0f5182e59e127 211 Pfam PF08238 Sel1 repeat 108 143 1.7E-5 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS20465 bc601cfc77b77aa3fcf0f5182e59e127 211 Pfam PF08238 Sel1 repeat 74 106 0.03 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS20465 bc601cfc77b77aa3fcf0f5182e59e127 211 SUPERFAMILY SSF81901 64 186 9.29E-23 T 28-03-2018 AL549_RS15755 06fc57a46e74b6e6bf95e4c27d90ac53 109 Pfam PF05656 Protein of unknown function (DUF805) 12 100 3.4E-20 T 28-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AL549_RS17505 c478bbe12d54992067064800c734d6f8 136 PIRSF PIRSF039090 1 132 2.0E-42 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AL549_RS17505 c478bbe12d54992067064800c734d6f8 136 Pfam PF02561 Flagellar protein FliS 6 122 8.5E-37 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AL549_RS17505 c478bbe12d54992067064800c734d6f8 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 7.7E-24 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AL549_RS17505 c478bbe12d54992067064800c734d6f8 136 Gene3D G3DSA:1.20.120.340 2 126 1.6E-41 T 28-03-2018 AL549_RS17505 c478bbe12d54992067064800c734d6f8 136 SUPERFAMILY SSF101116 6 127 2.62E-39 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AL549_RS09930 888c45bcda9d1707ddead2987c31ceb7 311 Pfam PF03601 Conserved hypothetical protein 698 25 291 1.5E-54 T 28-03-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 AL549_RS06830 c2169f6c5c3440ed351c855dfec4d402 375 Gene3D G3DSA:2.40.50.100 170 340 7.5E-8 T 28-03-2018 AL549_RS06830 c2169f6c5c3440ed351c855dfec4d402 375 SUPERFAMILY SSF111369 68 282 6.15E-27 T 28-03-2018 AL549_RS06830 c2169f6c5c3440ed351c855dfec4d402 375 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 279 3.5E-16 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL549_RS06830 c2169f6c5c3440ed351c855dfec4d402 375 Gene3D G3DSA:1.10.287.470 127 169 2.0E-6 T 28-03-2018 AL549_RS06830 c2169f6c5c3440ed351c855dfec4d402 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 62 366 3.9E-67 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL549_RS06830 c2169f6c5c3440ed351c855dfec4d402 375 Gene3D G3DSA:2.40.50.100 70 126 8.8E-12 T 28-03-2018 AL549_RS04550 919486dc689088846610478046eb740b 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AL549_RS04550 919486dc689088846610478046eb740b 316 Hamap MF_00492 Transaldolase [tal]. 2 316 50.955 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AL549_RS04550 919486dc689088846610478046eb740b 316 Gene3D G3DSA:3.20.20.70 2 316 1.1E-119 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS04550 919486dc689088846610478046eb740b 316 SUPERFAMILY SSF51569 1 315 3.04E-114 T 28-03-2018 AL549_RS04550 919486dc689088846610478046eb740b 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 1.8E-101 T 28-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AL549_RS04550 919486dc689088846610478046eb740b 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AL549_RS04550 919486dc689088846610478046eb740b 316 TIGRFAM TIGR00874 talAB: transaldolase 3 316 2.9E-154 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AL549_RS03845 663900d93be1e54ca5dcb91b99579a10 448 Gene3D G3DSA:3.10.580.10 194 268 3.4E-5 T 28-03-2018 AL549_RS03845 663900d93be1e54ca5dcb91b99579a10 448 SUPERFAMILY SSF54631 140 272 5.43E-15 T 28-03-2018 AL549_RS03845 663900d93be1e54ca5dcb91b99579a10 448 Gene3D G3DSA:1.10.357.20 275 448 2.1E-32 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL549_RS03845 663900d93be1e54ca5dcb91b99579a10 448 Pfam PF01769 Divalent cation transporter 319 440 7.8E-23 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL549_RS03845 663900d93be1e54ca5dcb91b99579a10 448 Gene3D G3DSA:3.10.580.10 65 193 0.0056 T 28-03-2018 AL549_RS03845 663900d93be1e54ca5dcb91b99579a10 448 SUPERFAMILY SSF161093 276 447 2.62E-47 T 28-03-2018 AL549_RS03845 663900d93be1e54ca5dcb91b99579a10 448 Pfam PF03448 MgtE intracellular N domain 36 135 2.5E-13 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL549_RS03845 663900d93be1e54ca5dcb91b99579a10 448 SUPERFAMILY SSF158791 34 132 3.27E-12 T 28-03-2018 AL549_RS03845 663900d93be1e54ca5dcb91b99579a10 448 SMART SM00924 34 137 3.5E-9 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL549_RS18130 d646a2a26a8e0b506f9a9420617b4376 1206 SUPERFAMILY SSF52980 909 1190 3.38E-84 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL549_RS18130 d646a2a26a8e0b506f9a9420617b4376 1206 Pfam PF00580 UvrD/REP helicase N-terminal domain 16 437 6.2E-60 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL549_RS18130 d646a2a26a8e0b506f9a9420617b4376 1206 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 8 1189 22.809 T 28-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AL549_RS18130 d646a2a26a8e0b506f9a9420617b4376 1206 Gene3D G3DSA:3.40.50.300 598 880 2.7E-30 T 28-03-2018 AL549_RS18130 d646a2a26a8e0b506f9a9420617b4376 1206 Gene3D G3DSA:3.40.50.300 445 597 2.0E-17 T 28-03-2018 AL549_RS18130 d646a2a26a8e0b506f9a9420617b4376 1206 SUPERFAMILY SSF52540 121 205 3.55E-109 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18130 d646a2a26a8e0b506f9a9420617b4376 1206 SUPERFAMILY SSF52540 802 848 3.55E-109 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18130 d646a2a26a8e0b506f9a9420617b4376 1206 SUPERFAMILY SSF52540 326 772 3.55E-109 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18130 d646a2a26a8e0b506f9a9420617b4376 1206 SUPERFAMILY SSF52540 16 83 3.55E-109 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18130 d646a2a26a8e0b506f9a9420617b4376 1206 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 11 1188 0.0 T 28-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AL549_RS18130 d646a2a26a8e0b506f9a9420617b4376 1206 Gene3D G3DSA:3.90.320.10 897 1195 3.7E-79 T 28-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AL549_RS18130 d646a2a26a8e0b506f9a9420617b4376 1206 Pfam PF13361 UvrD-like helicase C-terminal domain 442 816 1.1E-19 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL549_RS18130 d646a2a26a8e0b506f9a9420617b4376 1206 Pfam PF12705 PD-(D/E)XK nuclease superfamily 964 1170 2.2E-8 T 28-03-2018 AL549_RS18130 d646a2a26a8e0b506f9a9420617b4376 1206 Gene3D G3DSA:3.40.50.300 5 160 8.9E-5 T 28-03-2018 AL549_RS18130 d646a2a26a8e0b506f9a9420617b4376 1206 Gene3D G3DSA:1.10.3170.10 161 350 1.6E-53 T 28-03-2018 AL549_RS15390 a5a26a3612566f6d226631aec8b3514b 542 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 522 541 8.8E-4 T 28-03-2018 IPR020008 GlyGly-CTERM domain AL549_RS15390 a5a26a3612566f6d226631aec8b3514b 542 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 129 143 2.0E-13 T 28-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL549_RS15390 a5a26a3612566f6d226631aec8b3514b 542 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 72 87 2.0E-13 T 28-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL549_RS15390 a5a26a3612566f6d226631aec8b3514b 542 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 222 234 2.0E-13 T 28-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL549_RS15390 a5a26a3612566f6d226631aec8b3514b 542 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 82 87 - T 28-03-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AL549_RS15390 a5a26a3612566f6d226631aec8b3514b 542 SUPERFAMILY SSF50494 9 277 1.13E-71 T 28-03-2018 IPR009003 Peptidase S1, PA clan AL549_RS15390 a5a26a3612566f6d226631aec8b3514b 542 Gene3D G3DSA:2.40.10.10 140 278 1.0E-40 T 28-03-2018 AL549_RS15390 a5a26a3612566f6d226631aec8b3514b 542 SMART SM00020 40 272 1.2E-76 T 28-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL549_RS15390 a5a26a3612566f6d226631aec8b3514b 542 Gene3D G3DSA:2.40.10.10 41 75 1.8E-14 T 28-03-2018 AL549_RS15390 a5a26a3612566f6d226631aec8b3514b 542 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 223 234 - T 28-03-2018 IPR033116 Serine proteases, trypsin family, serine active site AL549_RS15390 a5a26a3612566f6d226631aec8b3514b 542 Pfam PF00089 Trypsin 41 272 4.2E-59 T 28-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL549_RS15390 a5a26a3612566f6d226631aec8b3514b 542 Gene3D G3DSA:2.40.10.10 76 139 4.6E-20 T 28-03-2018 AL549_RS08265 784cf5d998f21b9e445d736a8cbc1a3c 432 Hamap MF_00504 Peptidase B [pepB]. 3 428 70.046 T 28-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AL549_RS08265 784cf5d998f21b9e445d736a8cbc1a3c 432 Pfam PF12404 Peptidase 5 81 1.7E-32 T 28-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AL549_RS08265 784cf5d998f21b9e445d736a8cbc1a3c 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL549_RS08265 784cf5d998f21b9e445d736a8cbc1a3c 432 SUPERFAMILY SSF53187 104 427 1.29E-99 T 28-03-2018 AL549_RS08265 784cf5d998f21b9e445d736a8cbc1a3c 432 PIRSF PIRSF036388 1 432 1.1E-222 T 28-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AL549_RS08265 784cf5d998f21b9e445d736a8cbc1a3c 432 Gene3D G3DSA:3.40.630.10 93 432 4.6E-110 T 28-03-2018 AL549_RS08265 784cf5d998f21b9e445d736a8cbc1a3c 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 8.5E-46 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL549_RS08265 784cf5d998f21b9e445d736a8cbc1a3c 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 8.5E-46 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL549_RS08265 784cf5d998f21b9e445d736a8cbc1a3c 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 8.5E-46 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL549_RS08265 784cf5d998f21b9e445d736a8cbc1a3c 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 8.5E-46 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL549_RS08265 784cf5d998f21b9e445d736a8cbc1a3c 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 8.5E-46 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL549_RS08265 784cf5d998f21b9e445d736a8cbc1a3c 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 422 1.3E-102 T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL549_RS22015 6aaaa8a2495e38bd195611c9dc1a6108 87 Gene3D G3DSA:3.30.160.140 5 85 7.9E-29 T 28-03-2018 IPR009962 Protein of unknown function DUF1488 AL549_RS22015 6aaaa8a2495e38bd195611c9dc1a6108 87 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 3.3E-25 T 28-03-2018 IPR009962 Protein of unknown function DUF1488 AL549_RS22015 6aaaa8a2495e38bd195611c9dc1a6108 87 SUPERFAMILY SSF160272 1 86 1.31E-28 T 28-03-2018 IPR009962 Protein of unknown function DUF1488 AL549_RS07265 2a0ac72be913701cff8b3a7c7b4d3e28 459 SUPERFAMILY SSF51445 30 420 1.25E-59 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS07265 2a0ac72be913701cff8b3a7c7b4d3e28 459 PRINTS PR00110 Alpha-amylase signature 97 108 1.3E-16 T 28-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL549_RS07265 2a0ac72be913701cff8b3a7c7b4d3e28 459 PRINTS PR00110 Alpha-amylase signature 305 317 1.3E-16 T 28-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL549_RS07265 2a0ac72be913701cff8b3a7c7b4d3e28 459 PRINTS PR00110 Alpha-amylase signature 210 221 1.3E-16 T 28-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL549_RS07265 2a0ac72be913701cff8b3a7c7b4d3e28 459 PRINTS PR00110 Alpha-amylase signature 239 257 1.3E-16 T 28-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL549_RS07265 2a0ac72be913701cff8b3a7c7b4d3e28 459 PRINTS PR00110 Alpha-amylase signature 64 81 1.3E-16 T 28-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL549_RS07265 2a0ac72be913701cff8b3a7c7b4d3e28 459 Gene3D G3DSA:3.20.20.80 17 388 8.9E-47 T 28-03-2018 AL549_RS07265 2a0ac72be913701cff8b3a7c7b4d3e28 459 Pfam PF00128 Alpha amylase, catalytic domain 40 247 4.4E-17 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS07265 2a0ac72be913701cff8b3a7c7b4d3e28 459 Gene3D G3DSA:2.60.40.1180 389 459 1.8E-7 T 28-03-2018 AL549_RS07265 2a0ac72be913701cff8b3a7c7b4d3e28 459 SMART SM00642 22 383 1.2E-25 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS17660 38cb592cdfa2784f51dd0f0e0ad8e026 212 Gene3D G3DSA:3.40.50.170 1 197 5.5E-70 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL549_RS17660 38cb592cdfa2784f51dd0f0e0ad8e026 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.875 T 28-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AL549_RS17660 38cb592cdfa2784f51dd0f0e0ad8e026 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 28-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL549_RS17660 38cb592cdfa2784f51dd0f0e0ad8e026 212 Pfam PF00551 Formyl transferase 2 182 5.6E-66 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL549_RS17660 38cb592cdfa2784f51dd0f0e0ad8e026 212 SUPERFAMILY SSF53328 2 194 1.18E-66 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL549_RS17660 38cb592cdfa2784f51dd0f0e0ad8e026 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 191 1.0E-77 T 28-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AL549_RS19910 d5b76750db7d63cf0da13ed7a586475c 479 Pfam PF00989 PAS fold 186 297 1.4E-8 T 28-03-2018 IPR013767 PAS fold GO:0006355 AL549_RS19910 d5b76750db7d63cf0da13ed7a586475c 479 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 182 307 1.1E-13 T 28-03-2018 IPR000014 PAS domain AL549_RS19910 d5b76750db7d63cf0da13ed7a586475c 479 SMART SM00091 185 251 8.5E-10 T 28-03-2018 IPR000014 PAS domain AL549_RS19910 d5b76750db7d63cf0da13ed7a586475c 479 Gene3D G3DSA:3.30.70.270 304 473 1.5E-54 T 28-03-2018 AL549_RS19910 d5b76750db7d63cf0da13ed7a586475c 479 Gene3D G3DSA:3.30.450.20 179 303 2.2E-22 T 28-03-2018 AL549_RS19910 d5b76750db7d63cf0da13ed7a586475c 479 Pfam PF00990 Diguanylate cyclase, GGDEF domain 311 469 1.0E-43 T 28-03-2018 IPR000160 GGDEF domain AL549_RS19910 d5b76750db7d63cf0da13ed7a586475c 479 SMART SM00267 300 474 4.7E-57 T 28-03-2018 IPR000160 GGDEF domain AL549_RS19910 d5b76750db7d63cf0da13ed7a586475c 479 Gene3D G3DSA:3.30.450.20 110 178 0.0038 T 28-03-2018 AL549_RS19910 d5b76750db7d63cf0da13ed7a586475c 479 SUPERFAMILY SSF55073 316 472 4.94E-46 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS19910 d5b76750db7d63cf0da13ed7a586475c 479 Gene3D G3DSA:3.30.450.20 46 87 0.016 T 28-03-2018 AL549_RS19910 d5b76750db7d63cf0da13ed7a586475c 479 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 308 471 4.2E-50 T 28-03-2018 IPR000160 GGDEF domain AL549_RS19910 d5b76750db7d63cf0da13ed7a586475c 479 SUPERFAMILY SSF55785 174 298 8.72E-17 T 28-03-2018 IPR000014 PAS domain AL549_RS17420 666de3bdc09a6e93bdbbb810f3d55d99 260 Pfam PF01311 Bacterial export proteins, family 1 13 243 2.9E-56 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL549_RS17420 666de3bdc09a6e93bdbbb810f3d55d99 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 9.6E-16 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL549_RS17420 666de3bdc09a6e93bdbbb810f3d55d99 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 9.6E-16 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL549_RS17420 666de3bdc09a6e93bdbbb810f3d55d99 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 9.6E-16 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL549_RS17420 666de3bdc09a6e93bdbbb810f3d55d99 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 9.6E-16 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL549_RS17420 666de3bdc09a6e93bdbbb810f3d55d99 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 255 8.0E-74 T 28-03-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AL549_RS12505 4e59b50b824b17ca0b2e00f19c3cf5bb 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 6.0E-12 T 28-03-2018 IPR008621 Cbb3-type cytochrome oxidase component AL549_RS11000 2bd942e58898a5d7c08cdc707228551c 425 Gene3D G3DSA:3.90.1150.10 257 421 2.1E-42 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS11000 2bd942e58898a5d7c08cdc707228551c 425 PIRSF PIRSF000521 22 421 2.1E-38 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL549_RS11000 2bd942e58898a5d7c08cdc707228551c 425 SUPERFAMILY SSF53383 4 420 3.46E-135 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS11000 2bd942e58898a5d7c08cdc707228551c 425 Pfam PF00202 Aminotransferase class-III 24 418 6.9E-130 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL549_RS11000 2bd942e58898a5d7c08cdc707228551c 425 Gene3D G3DSA:3.90.1150.10 193 256 0.18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS11000 2bd942e58898a5d7c08cdc707228551c 425 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 2.9E-178 T 28-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AL549_RS11000 2bd942e58898a5d7c08cdc707228551c 425 Gene3D G3DSA:3.90.1150.10 3 170 8.2E-44 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS11000 2bd942e58898a5d7c08cdc707228551c 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL549_RS11000 2bd942e58898a5d7c08cdc707228551c 425 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 48.954 T 28-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AL549_RS15790 f9e3bc3522816c058ab6e18b8c829e99 492 Pfam PF02449 Beta-galactosidase 87 200 2.7E-7 T 28-03-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL549_RS15790 f9e3bc3522816c058ab6e18b8c829e99 492 Gene3D G3DSA:3.20.20.80 84 431 5.5E-9 T 28-03-2018 AL549_RS15790 f9e3bc3522816c058ab6e18b8c829e99 492 Pfam PF16116 Domain of unknown function (DUF4832) 310 470 2.4E-17 T 28-03-2018 IPR032267 Domain of unknown function DUF4832 AL549_RS15790 f9e3bc3522816c058ab6e18b8c829e99 492 SUPERFAMILY SSF51445 88 282 3.93E-12 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS23405 4423d10ea13fe1ecf9b2dd7999930244 185 Gene3D G3DSA:1.10.60.30 103 176 7.8E-25 T 28-03-2018 AL549_RS23405 4423d10ea13fe1ecf9b2dd7999930244 185 SUPERFAMILY SSF158710 28 170 1.57E-53 T 28-03-2018 IPR023153 PSPTO4464-like domain AL549_RS23405 4423d10ea13fe1ecf9b2dd7999930244 185 Gene3D G3DSA:1.10.60.30 30 98 7.2E-29 T 28-03-2018 AL549_RS23405 4423d10ea13fe1ecf9b2dd7999930244 185 Pfam PF04751 Protein of unknown function (DUF615) 19 168 3.5E-58 T 28-03-2018 IPR006839 Ribosome-associated, YjgA AL549_RS23405 4423d10ea13fe1ecf9b2dd7999930244 185 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 172 24.003 T 28-03-2018 IPR006839 Ribosome-associated, YjgA AL549_RS23405 4423d10ea13fe1ecf9b2dd7999930244 185 PIRSF PIRSF016183 1 175 5.4E-74 T 28-03-2018 IPR006839 Ribosome-associated, YjgA AL549_RS15050 44d0e59c008ef815ad932893b11fae21 128 Pfam PF14552 Tautomerase enzyme 36 112 1.8E-24 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 AL549_RS15050 44d0e59c008ef815ad932893b11fae21 128 Gene3D G3DSA:3.30.429.10 1 128 5.0E-27 T 28-03-2018 AL549_RS15050 44d0e59c008ef815ad932893b11fae21 128 SUPERFAMILY SSF55331 2 119 1.45E-32 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily AL549_RS22970 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 SUPERFAMILY SSF52788 1 146 1.05E-41 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL549_RS22970 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 SMART SM00226 3 145 4.4E-52 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL549_RS22970 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 143 3.2E-37 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL549_RS22970 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 7.3E-27 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL549_RS22970 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 7.3E-27 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL549_RS22970 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 114 7.3E-27 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL549_RS22970 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 7.3E-27 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL549_RS22970 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 7.3E-27 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL549_RS22970 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 Gene3D G3DSA:3.40.50.2300 3 146 1.8E-41 T 28-03-2018 AL549_RS11075 654056fc1bb02bac64f03062b2160b52 456 Gene3D G3DSA:1.20.200.10 118 391 8.7E-85 T 28-03-2018 AL549_RS11075 654056fc1bb02bac64f03062b2160b52 456 SUPERFAMILY SSF48557 4 448 8.48E-109 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL549_RS11075 654056fc1bb02bac64f03062b2160b52 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 5.9E-18 T 28-03-2018 IPR000362 Fumarate lyase family AL549_RS11075 654056fc1bb02bac64f03062b2160b52 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 5.9E-18 T 28-03-2018 IPR000362 Fumarate lyase family AL549_RS11075 654056fc1bb02bac64f03062b2160b52 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 5.9E-18 T 28-03-2018 IPR000362 Fumarate lyase family AL549_RS11075 654056fc1bb02bac64f03062b2160b52 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 5.9E-18 T 28-03-2018 IPR000362 Fumarate lyase family AL549_RS11075 654056fc1bb02bac64f03062b2160b52 456 Pfam PF00206 Lyase 14 313 4.3E-75 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal AL549_RS11075 654056fc1bb02bac64f03062b2160b52 456 Gene3D G3DSA:1.10.40.30 392 446 3.7E-32 T 28-03-2018 AL549_RS11075 654056fc1bb02bac64f03062b2160b52 456 Gene3D G3DSA:1.10.275.10 1 117 2.6E-42 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AL549_RS11075 654056fc1bb02bac64f03062b2160b52 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 2.6E-52 T 28-03-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 AL549_RS11075 654056fc1bb02bac64f03062b2160b52 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL549_RS11075 654056fc1bb02bac64f03062b2160b52 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 6.5E-151 T 28-03-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL549_RS12695 a5defa809b83eb8addd1ed853b83188c 677 Pfam PF00512 His Kinase A (phospho-acceptor) domain 445 510 2.3E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS12695 a5defa809b83eb8addd1ed853b83188c 677 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 559 665 3.1E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS12695 a5defa809b83eb8addd1ed853b83188c 677 SUPERFAMILY SSF55874 502 664 4.19E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS12695 a5defa809b83eb8addd1ed853b83188c 677 SUPERFAMILY SSF47384 440 509 3.92E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS12695 a5defa809b83eb8addd1ed853b83188c 677 Gene3D G3DSA:1.10.287.130 439 508 1.1E-12 T 28-03-2018 AL549_RS12695 a5defa809b83eb8addd1ed853b83188c 677 SUPERFAMILY SSF103190 141 307 1.44E-14 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL549_RS12695 a5defa809b83eb8addd1ed853b83188c 677 Pfam PF17202 Single cache domain 3 201 314 1.5E-26 T 28-03-2018 IPR033463 Single cache domain 3 AL549_RS12695 a5defa809b83eb8addd1ed853b83188c 677 Gene3D G3DSA:3.30.450.20 213 311 7.1E-6 T 28-03-2018 AL549_RS12695 a5defa809b83eb8addd1ed853b83188c 677 SMART SM00387 555 666 2.0E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS12695 a5defa809b83eb8addd1ed853b83188c 677 Gene3D G3DSA:3.30.565.10 514 674 1.7E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS12695 a5defa809b83eb8addd1ed853b83188c 677 SMART SM00388 445 512 9.5E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS12695 a5defa809b83eb8addd1ed853b83188c 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 644 8.6E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS12695 a5defa809b83eb8addd1ed853b83188c 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 663 8.6E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS12695 a5defa809b83eb8addd1ed853b83188c 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 625 8.6E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS12695 a5defa809b83eb8addd1ed853b83188c 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 611 8.6E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS12695 a5defa809b83eb8addd1ed853b83188c 677 Gene3D G3DSA:3.30.450.20 64 203 9.4E-4 T 28-03-2018 AL549_RS17170 d49f707f383e829f6dad93dc1e5b06a2 291 SUPERFAMILY SSF53850 89 287 1.38E-37 T 28-03-2018 AL549_RS17170 d49f707f383e829f6dad93dc1e5b06a2 291 Gene3D G3DSA:1.10.10.10 1 89 7.8E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS17170 d49f707f383e829f6dad93dc1e5b06a2 291 Pfam PF03466 LysR substrate binding domain 88 286 1.6E-39 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS17170 d49f707f383e829f6dad93dc1e5b06a2 291 SUPERFAMILY SSF46785 1 83 1.04E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS17170 d49f707f383e829f6dad93dc1e5b06a2 291 Gene3D G3DSA:3.40.190.10 92 176 2.5E-13 T 28-03-2018 AL549_RS17170 d49f707f383e829f6dad93dc1e5b06a2 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.8E-13 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS17170 d49f707f383e829f6dad93dc1e5b06a2 291 Gene3D G3DSA:3.40.190.10 177 260 3.5E-21 T 28-03-2018 AL549_RS02095 51026df557368104cabc60d5af99445d 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 28-03-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 AL549_RS02095 51026df557368104cabc60d5af99445d 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 43.643 T 28-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 AL549_RS02095 51026df557368104cabc60d5af99445d 300 SUPERFAMILY SSF53697 8 250 1.85E-68 T 28-03-2018 AL549_RS02095 51026df557368104cabc60d5af99445d 300 Gene3D G3DSA:1.10.8.10 271 297 1.0E-4 T 28-03-2018 AL549_RS02095 51026df557368104cabc60d5af99445d 300 Gene3D G3DSA:1.10.8.10 242 270 2.2E-10 T 28-03-2018 AL549_RS02095 51026df557368104cabc60d5af99445d 300 Pfam PF13580 SIS domain 44 166 6.5E-7 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL549_RS02095 51026df557368104cabc60d5af99445d 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 1.7E-133 T 28-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 AL549_RS02095 51026df557368104cabc60d5af99445d 300 Gene3D G3DSA:3.40.50.10490 12 241 8.8E-50 T 28-03-2018 AL549_RS08085 b2f7c4122ea761c03f1acdc0f9feb880 317 Gene3D G3DSA:3.40.190.10 36 169 1.5E-25 T 28-03-2018 AL549_RS08085 b2f7c4122ea761c03f1acdc0f9feb880 317 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 1 302 9.0E-75 T 28-03-2018 IPR011862 Phosphate binding protein GO:0006810 AL549_RS08085 b2f7c4122ea761c03f1acdc0f9feb880 317 Gene3D G3DSA:3.40.190.10 170 316 7.5E-25 T 28-03-2018 AL549_RS08085 b2f7c4122ea761c03f1acdc0f9feb880 317 SUPERFAMILY SSF53850 33 314 3.88E-65 T 28-03-2018 AL549_RS08085 b2f7c4122ea761c03f1acdc0f9feb880 317 Pfam PF12849 PBP superfamily domain 33 289 2.2E-30 T 28-03-2018 IPR024370 PBP domain AL549_RS18770 d1c6377d598ddc8f217abe55797d4ecc 122 PIRSF PIRSF006287 1 122 1.1E-49 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 AL549_RS18770 d1c6377d598ddc8f217abe55797d4ecc 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 2.0E-65 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 AL549_RS18770 d1c6377d598ddc8f217abe55797d4ecc 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 1.7E-42 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 AL549_RS18770 d1c6377d598ddc8f217abe55797d4ecc 122 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 30.801 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 AL549_RS15740 36648b68d53456448ef958feca8a8021 637 SUPERFAMILY SSF53067 15 208 4.81E-27 T 28-03-2018 AL549_RS15740 36648b68d53456448ef958feca8a8021 637 SUPERFAMILY SSF53067 423 482 5.02E-27 T 28-03-2018 AL549_RS15740 36648b68d53456448ef958feca8a8021 637 SUPERFAMILY SSF53067 222 372 5.02E-27 T 28-03-2018 AL549_RS15740 36648b68d53456448ef958feca8a8021 637 PRINTS PR00301 70kDa heat shock protein signature 15 28 4.8E-7 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS15740 36648b68d53456448ef958feca8a8021 637 PRINTS PR00301 70kDa heat shock protein signature 166 186 4.8E-7 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS15740 36648b68d53456448ef958feca8a8021 637 PRINTS PR00301 70kDa heat shock protein signature 233 243 4.8E-7 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS15740 36648b68d53456448ef958feca8a8021 637 Gene3D G3DSA:3.30.420.40 234 452 2.7E-18 T 28-03-2018 AL549_RS15740 36648b68d53456448ef958feca8a8021 637 Gene3D G3DSA:3.30.420.40 14 233 3.0E-31 T 28-03-2018 AL549_RS15740 36648b68d53456448ef958feca8a8021 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 227 240 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL549_RS15740 36648b68d53456448ef958feca8a8021 637 Pfam PF00012 Hsp70 protein 17 345 8.5E-17 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS15740 36648b68d53456448ef958feca8a8021 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 19 26 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL549_RS17920 03eec48d8bb1e53e3180e66058b8aa2f 369 SUPERFAMILY SSF56059 124 278 9.77E-12 T 28-03-2018 AL549_RS17920 03eec48d8bb1e53e3180e66058b8aa2f 369 Gene3D G3DSA:3.40.50.20 1 113 2.2E-6 T 28-03-2018 AL549_RS17920 03eec48d8bb1e53e3180e66058b8aa2f 369 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 258 265 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL549_RS17920 03eec48d8bb1e53e3180e66058b8aa2f 369 Gene3D G3DSA:3.30.470.20 114 278 1.9E-6 T 28-03-2018 AL549_RS17920 03eec48d8bb1e53e3180e66058b8aa2f 369 Pfam PF02655 ATP-grasp domain 110 267 7.3E-6 T 28-03-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 AL549_RS22745 e92989b1f1b25736b8b56be82d15c652 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.671 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS22745 e92989b1f1b25736b8b56be82d15c652 56 SUPERFAMILY SSF57829 3 54 7.94E-19 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AL549_RS22745 e92989b1f1b25736b8b56be82d15c652 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 1.6E-26 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS22745 e92989b1f1b25736b8b56be82d15c652 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 28-03-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS22745 e92989b1f1b25736b8b56be82d15c652 56 Pfam PF00471 Ribosomal protein L33 8 54 3.4E-17 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS03430 7b84e0a944aaae2ecb1e08fd25e3749d 318 Gene3D G3DSA:3.40.50.2300 134 294 1.1E-24 T 28-03-2018 AL549_RS03430 7b84e0a944aaae2ecb1e08fd25e3749d 318 SUPERFAMILY SSF53822 23 303 4.32E-59 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS03430 7b84e0a944aaae2ecb1e08fd25e3749d 318 Pfam PF13407 Periplasmic binding protein domain 24 280 7.7E-43 T 28-03-2018 IPR025997 Periplasmic binding protein AL549_RS03430 7b84e0a944aaae2ecb1e08fd25e3749d 318 Gene3D G3DSA:3.40.50.2300 20 133 4.4E-24 T 28-03-2018 AL549_RS19115 7a7228b9d68a206dfa48d432c7244ff4 347 SUPERFAMILY SSF55120 7 339 2.16E-97 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS19115 7a7228b9d68a206dfa48d432c7244ff4 347 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 29.176 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS19115 7a7228b9d68a206dfa48d432c7244ff4 347 Gene3D G3DSA:3.30.2340.10 170 303 3.3E-26 T 28-03-2018 AL549_RS19115 7a7228b9d68a206dfa48d432c7244ff4 347 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 28-03-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 AL549_RS19115 7a7228b9d68a206dfa48d432c7244ff4 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 171 6.5E-42 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS19115 7a7228b9d68a206dfa48d432c7244ff4 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 186 337 7.5E-20 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS19115 7a7228b9d68a206dfa48d432c7244ff4 347 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 9 225 4.7E-55 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS21395 489c92cee3ef7338651d2acc274ee008 259 Pfam PF04445 Putative SAM-dependent methyltransferase 19 254 6.2E-105 T 28-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AL549_RS21395 489c92cee3ef7338651d2acc274ee008 259 SUPERFAMILY SSF53335 5 254 3.38E-73 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS21395 489c92cee3ef7338651d2acc274ee008 259 Gene3D G3DSA:3.40.50.150 57 259 2.8E-35 T 28-03-2018 AL549_RS21395 489c92cee3ef7338651d2acc274ee008 259 Gene3D G3DSA:3.40.1630.10 3 56 1.4E-25 T 28-03-2018 AL549_RS21395 489c92cee3ef7338651d2acc274ee008 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 38.377 T 28-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AL549_RS20625 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 8.0E-44 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL549_RS20625 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 8.0E-44 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL549_RS20625 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 8.0E-44 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL549_RS20625 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 8.0E-44 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL549_RS20625 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 8.0E-44 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL549_RS20625 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 8.0E-44 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL549_RS20625 7f9e4f0b1475144657a1c6c9ef550e53 345 Gene3D G3DSA:1.10.1040.10 201 345 6.4E-54 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL549_RS20625 7f9e4f0b1475144657a1c6c9ef550e53 345 SUPERFAMILY SSF51735 15 190 3.38E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS20625 7f9e4f0b1475144657a1c6c9ef550e53 345 Gene3D G3DSA:3.40.50.720 10 190 1.4E-30 T 28-03-2018 AL549_RS20625 7f9e4f0b1475144657a1c6c9ef550e53 345 PIRSF PIRSF000114 9 344 2.5E-94 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL549_RS20625 7f9e4f0b1475144657a1c6c9ef550e53 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.003 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL549_RS20625 7f9e4f0b1475144657a1c6c9ef550e53 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 171 7.1E-46 T 28-03-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL549_RS20625 7f9e4f0b1475144657a1c6c9ef550e53 345 SUPERFAMILY SSF48179 191 343 6.89E-56 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL549_RS20625 7f9e4f0b1475144657a1c6c9ef550e53 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 9.0E-52 T 28-03-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL549_RS20625 7f9e4f0b1475144657a1c6c9ef550e53 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL549_RS21750 7e86773070c4488000347add6c4bad2f 46 Pfam PF00468 Ribosomal protein L34 3 45 5.3E-24 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS21750 7e86773070c4488000347add6c4bad2f 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 45 5.6E-26 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS21750 7e86773070c4488000347add6c4bad2f 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 41 4.0E-14 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS21750 7e86773070c4488000347add6c4bad2f 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 3 46 16.38 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS21750 7e86773070c4488000347add6c4bad2f 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 4 23 - T 28-03-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS21405 696352469e86ac92a0062087aa898da7 154 SMART SM00344 8 115 2.2E-40 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL549_RS21405 696352469e86ac92a0062087aa898da7 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 6.7E-13 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS21405 696352469e86ac92a0062087aa898da7 154 Gene3D G3DSA:1.10.10.10 2 59 1.5E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21405 696352469e86ac92a0062087aa898da7 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 2.6E-8 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS21405 696352469e86ac92a0062087aa898da7 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 2.6E-8 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS21405 696352469e86ac92a0062087aa898da7 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 2.6E-8 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS21405 696352469e86ac92a0062087aa898da7 154 SUPERFAMILY SSF54909 69 154 4.42E-19 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL549_RS21405 696352469e86ac92a0062087aa898da7 154 SUPERFAMILY SSF46785 7 68 9.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21405 696352469e86ac92a0062087aa898da7 154 Gene3D G3DSA:3.30.70.920 60 153 4.1E-23 T 28-03-2018 AL549_RS21405 696352469e86ac92a0062087aa898da7 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.4E-16 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL549_RS21015 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 Gene3D G3DSA:1.10.10.10 2 65 4.0E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21015 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 Gene3D G3DSA:2.30.30.100 272 318 6.0E-12 T 28-03-2018 AL549_RS21015 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 Pfam PF02237 Biotin protein ligase C terminal domain 274 318 4.2E-9 T 28-03-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 AL549_RS21015 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 SUPERFAMILY SSF55681 78 269 2.29E-60 T 28-03-2018 AL549_RS21015 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 SUPERFAMILY SSF50037 273 318 5.95E-9 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal AL549_RS21015 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 SUPERFAMILY SSF46785 9 61 8.37E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21015 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 3.9E-21 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AL549_RS21015 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 318 5.0E-68 T 28-03-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 AL549_RS21015 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 Pfam PF08279 HTH domain 9 60 9.0E-12 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 AL549_RS21015 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 Gene3D G3DSA:3.30.930.10 66 271 6.9E-62 T 28-03-2018 AL549_RS21015 7b58d4828b41e6fb4cb14bd2ab7adfc1 322 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 318 32.518 T 28-03-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 AL549_RS09675 dded29af669cc2953b470fa39f3c366a 395 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 244 344 5.6E-27 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL549_RS09675 dded29af669cc2953b470fa39f3c366a 395 Gene3D G3DSA:3.40.47.10 248 395 6.5E-41 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS09675 dded29af669cc2953b470fa39f3c366a 395 SMART SM00825 Beta-ketoacyl synthase 35 338 2.4E-7 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL549_RS09675 dded29af669cc2953b470fa39f3c366a 395 SUPERFAMILY SSF53901 7 236 3.57E-41 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS09675 dded29af669cc2953b470fa39f3c366a 395 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site AL549_RS09675 dded29af669cc2953b470fa39f3c366a 395 Gene3D G3DSA:3.40.47.10 1 241 6.1E-38 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS09675 dded29af669cc2953b470fa39f3c366a 395 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 76 236 6.1E-21 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL549_RS09675 dded29af669cc2953b470fa39f3c366a 395 SUPERFAMILY SSF53901 210 391 3.03E-45 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS01095 9bb182b2b16174b7efd71e74513a8397 273 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 1.9E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01095 9bb182b2b16174b7efd71e74513a8397 273 Gene3D G3DSA:1.10.10.10 2 88 7.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01095 9bb182b2b16174b7efd71e74513a8397 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01095 9bb182b2b16174b7efd71e74513a8397 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01095 9bb182b2b16174b7efd71e74513a8397 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01095 9bb182b2b16174b7efd71e74513a8397 273 SUPERFAMILY SSF46785 5 86 1.05E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS19760 b85dffe44deb41990245771c4d8f0730 162 Pfam PF04093 rod shape-determining protein MreD 9 154 1.1E-39 T 28-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AL549_RS19760 b85dffe44deb41990245771c4d8f0730 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 10 154 9.5E-38 T 28-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AL549_RS19760 b85dffe44deb41990245771c4d8f0730 162 PIRSF PIRSF018472 1 162 1.5E-41 T 28-03-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type AL549_RS19915 9055f11119d295054d56afb2a8a23fb1 376 Pfam PF08495 FIST N domain 28 215 2.4E-32 T 28-03-2018 IPR013702 FIST domain, N-terminal AL549_RS19915 9055f11119d295054d56afb2a8a23fb1 376 SMART SM00897 24 217 2.5E-45 T 28-03-2018 IPR013702 FIST domain, N-terminal AL549_RS19915 9055f11119d295054d56afb2a8a23fb1 376 SMART SM01204 218 355 1.1E-44 T 28-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL549_RS19915 9055f11119d295054d56afb2a8a23fb1 376 Pfam PF10442 FIST C domain 218 354 7.7E-30 T 28-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL549_RS23230 cfb35c2928f81406c567ef4683af5262 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 28-03-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23230 cfb35c2928f81406c567ef4683af5262 206 SMART SM00363 96 160 8.9E-20 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS23230 cfb35c2928f81406c567ef4683af5262 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 2.6E-32 T 28-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AL549_RS23230 cfb35c2928f81406c567ef4683af5262 206 SMART SM01390 3 95 6.4E-50 T 28-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AL549_RS23230 cfb35c2928f81406c567ef4683af5262 206 Pfam PF01479 S4 domain 97 143 2.5E-18 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS23230 cfb35c2928f81406c567ef4683af5262 206 Gene3D G3DSA:1.10.1050.10 1 101 4.4E-41 T 28-03-2018 AL549_RS23230 cfb35c2928f81406c567ef4683af5262 206 SUPERFAMILY SSF55174 3 206 1.83E-72 T 28-03-2018 AL549_RS23230 cfb35c2928f81406c567ef4683af5262 206 Gene3D G3DSA:3.10.290.10 102 144 8.0E-16 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS23230 cfb35c2928f81406c567ef4683af5262 206 Gene3D G3DSA:1.10.1050.10 145 206 6.2E-19 T 28-03-2018 AL549_RS23230 cfb35c2928f81406c567ef4683af5262 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.3 T 28-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL549_RS23230 cfb35c2928f81406c567ef4683af5262 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 4.6E-85 T 28-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL549_RS06335 3d5206b0ab2128362ebb982e90b549a0 77 Gene3D G3DSA:1.20.1240.10 4 58 1.5E-4 T 28-03-2018 IPR003757 Photosystem I PsaL, reaction centre subunit XI GO:0009522|GO:0009538|GO:0015979 AL549_RS22600 8aeeac58030f8c350cfca800b0cbfbe0 706 SMART SM00954 235 345 2.7E-59 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 AL549_RS22600 8aeeac58030f8c350cfca800b0cbfbe0 706 SMART SM00471 41 153 3.2E-10 T 28-03-2018 IPR003607 HD/PDEase domain AL549_RS22600 8aeeac58030f8c350cfca800b0cbfbe0 706 SUPERFAMILY SSF55021 633 703 2.83E-6 T 28-03-2018 AL549_RS22600 8aeeac58030f8c350cfca800b0cbfbe0 706 Pfam PF02824 TGS domain 389 447 3.8E-19 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AL549_RS22600 8aeeac58030f8c350cfca800b0cbfbe0 706 Gene3D G3DSA:3.30.460.10 192 325 1.0E-39 T 28-03-2018 AL549_RS22600 8aeeac58030f8c350cfca800b0cbfbe0 706 Pfam PF13291 ACT domain 627 703 2.3E-13 T 28-03-2018 IPR002912 ACT domain AL549_RS22600 8aeeac58030f8c350cfca800b0cbfbe0 706 Gene3D G3DSA:3.30.70.260 626 706 5.7E-8 T 28-03-2018 AL549_RS22600 8aeeac58030f8c350cfca800b0cbfbe0 706 SUPERFAMILY SSF81301 180 393 1.31E-59 T 28-03-2018 AL549_RS22600 8aeeac58030f8c350cfca800b0cbfbe0 706 SUPERFAMILY SSF109604 3 190 1.41E-73 T 28-03-2018 AL549_RS22600 8aeeac58030f8c350cfca800b0cbfbe0 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.2E-34 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 AL549_RS22600 8aeeac58030f8c350cfca800b0cbfbe0 706 Gene3D G3DSA:3.10.20.30 383 458 5.7E-21 T 28-03-2018 IPR012675 Beta-grasp domain AL549_RS22600 8aeeac58030f8c350cfca800b0cbfbe0 706 Pfam PF13328 HD domain 28 175 7.1E-53 T 28-03-2018 IPR003607 HD/PDEase domain AL549_RS22600 8aeeac58030f8c350cfca800b0cbfbe0 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 701 9.4E-268 T 28-03-2018 IPR004811 RelA/SpoT family GO:0015969 AL549_RS22600 8aeeac58030f8c350cfca800b0cbfbe0 706 SUPERFAMILY SSF81271 376 448 1.64E-20 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL549_RS20195 f88522e7e0a3de119e15fc5aadb757c7 73 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 31.851 T 28-03-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS20195 f88522e7e0a3de119e15fc5aadb757c7 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 5.5E-35 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS20195 f88522e7e0a3de119e15fc5aadb757c7 73 SUPERFAMILY SSF143800 1 68 1.57E-27 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20195 f88522e7e0a3de119e15fc5aadb757c7 73 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS20195 f88522e7e0a3de119e15fc5aadb757c7 73 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.1E-23 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS20195 f88522e7e0a3de119e15fc5aadb757c7 73 PRINTS PR01249 Ribosomal protein L31 signature 32 47 7.1E-23 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS20195 f88522e7e0a3de119e15fc5aadb757c7 73 PRINTS PR01249 Ribosomal protein L31 signature 47 65 7.1E-23 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS20195 f88522e7e0a3de119e15fc5aadb757c7 73 Pfam PF01197 Ribosomal protein L31 1 66 5.0E-32 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS09735 d72e99536af7e1765c248a8970c07376 252 Gene3D G3DSA:3.40.1130.10 33 252 3.6E-27 T 28-03-2018 AL549_RS09735 d72e99536af7e1765c248a8970c07376 252 SMART SM00563 86 196 3.7E-13 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS09735 d72e99536af7e1765c248a8970c07376 252 SUPERFAMILY SSF69593 50 205 4.58E-24 T 28-03-2018 AL549_RS09735 d72e99536af7e1765c248a8970c07376 252 Pfam PF01553 Acyltransferase 73 191 3.4E-14 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS22710 d2923d109ff2072f5a6f2e397d766ec9 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 4.6E-70 T 28-03-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL549_RS22710 d2923d109ff2072f5a6f2e397d766ec9 213 Gene3D G3DSA:3.40.50.2020 1 193 1.4E-49 T 28-03-2018 AL549_RS22710 d2923d109ff2072f5a6f2e397d766ec9 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.153 T 28-03-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL549_RS22710 d2923d109ff2072f5a6f2e397d766ec9 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 4.1E-12 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL549_RS22710 d2923d109ff2072f5a6f2e397d766ec9 213 SUPERFAMILY SSF53271 2 211 1.02E-49 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 Gene3D G3DSA:3.30.565.10 414 598 1.1E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 SMART SM00387 456 599 1.4E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 SUPERFAMILY SSF55874 414 597 1.57E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 Gene3D G3DSA:2.30.30.40 599 633 0.014 T 28-03-2018 AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 Gene3D G3DSA:2.30.30.40 680 732 1.3E-20 T 28-03-2018 AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 SUPERFAMILY SSF47384 353 412 5.1E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 SMART SM01231 351 411 2.2E-17 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 SUPERFAMILY SSF47226 6 128 1.01E-30 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 Gene3D G3DSA:1.10.287.560 351 412 2.7E-16 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 SMART SM00260 591 732 5.1E-33 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 Gene3D G3DSA:1.20.120.160 2 145 1.9E-32 T 28-03-2018 AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 459 598 6.3E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 352 411 1.7E-12 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 SUPERFAMILY SSF50341 598 732 1.44E-28 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 515 5.9E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 577 5.9E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 596 5.9E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 553 5.9E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 Gene3D G3DSA:2.40.50.180 634 679 1.2E-8 T 28-03-2018 AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 SMART SM00073 6 103 1.4E-18 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 Pfam PF01627 Hpt domain 8 99 3.5E-17 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS17380 172e1df1245473280aec23d38d3b7553 741 Pfam PF01584 CheW-like domain 605 734 4.4E-22 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS05715 e49d5d0951bfd4467ef74d8b1557602b 331 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 84 95 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS05715 e49d5d0951bfd4467ef74d8b1557602b 331 Pfam PF07478 D-ala D-ala ligase C-terminus 127 327 8.4E-56 T 28-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS05715 e49d5d0951bfd4467ef74d8b1557602b 331 SUPERFAMILY SSF56059 117 328 4.91E-45 T 28-03-2018 AL549_RS05715 e49d5d0951bfd4467ef74d8b1557602b 331 Gene3D G3DSA:3.30.470.20 190 331 5.1E-32 T 28-03-2018 AL549_RS05715 e49d5d0951bfd4467ef74d8b1557602b 331 SUPERFAMILY SSF52440 4 116 1.15E-25 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL549_RS05715 e49d5d0951bfd4467ef74d8b1557602b 331 PIRSF PIRSF039102 1 331 3.2E-79 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS05715 e49d5d0951bfd4467ef74d8b1557602b 331 Gene3D G3DSA:3.30.1490.20 132 189 1.1E-11 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL549_RS05715 e49d5d0951bfd4467ef74d8b1557602b 331 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 331 32.774 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS05715 e49d5d0951bfd4467ef74d8b1557602b 331 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 329 1.4E-99 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS05715 e49d5d0951bfd4467ef74d8b1557602b 331 Pfam PF01820 D-ala D-ala ligase N-terminus 4 107 5.9E-20 T 28-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS05715 e49d5d0951bfd4467ef74d8b1557602b 331 Gene3D G3DSA:3.40.50.20 1 126 4.0E-25 T 28-03-2018 AL549_RS05715 e49d5d0951bfd4467ef74d8b1557602b 331 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 273 301 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS16050 5e1e10df8b325c4877dceeffa2aa257b 571 SMART SM00052 343 571 6.5E-15 T 28-03-2018 IPR001633 EAL domain AL549_RS16050 5e1e10df8b325c4877dceeffa2aa257b 571 Pfam PF00563 EAL domain 358 567 6.4E-41 T 28-03-2018 IPR001633 EAL domain AL549_RS16050 5e1e10df8b325c4877dceeffa2aa257b 571 SUPERFAMILY SSF141868 353 567 4.58E-47 T 28-03-2018 IPR001633 EAL domain AL549_RS16050 5e1e10df8b325c4877dceeffa2aa257b 571 Gene3D G3DSA:3.20.20.450 348 568 4.5E-45 T 28-03-2018 IPR001633 EAL domain AL549_RS05500 d936a737b072a1becf9846d97b44ba23 384 Gene3D G3DSA:1.20.1250.20 8 197 2.3E-16 T 28-03-2018 AL549_RS05500 d936a737b072a1becf9846d97b44ba23 384 Gene3D G3DSA:1.20.1250.20 202 381 4.9E-14 T 28-03-2018 AL549_RS05500 d936a737b072a1becf9846d97b44ba23 384 Pfam PF07690 Major Facilitator Superfamily 16 341 1.5E-24 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS05500 d936a737b072a1becf9846d97b44ba23 384 SUPERFAMILY SSF103473 11 377 2.09E-38 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS11260 c4c8d448b3410db78015561abf3ebbdd 301 SMART SM01131 178 300 2.1E-30 T 28-03-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL549_RS11260 c4c8d448b3410db78015561abf3ebbdd 301 Pfam PF02833 DHHA2 domain 180 297 3.0E-14 T 28-03-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL549_RS11260 c4c8d448b3410db78015561abf3ebbdd 301 Pfam PF01368 DHH family 2 142 8.8E-22 T 28-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL549_RS11260 c4c8d448b3410db78015561abf3ebbdd 301 Gene3D G3DSA:3.90.1640.10 1 185 5.9E-54 T 28-03-2018 AL549_RS11260 c4c8d448b3410db78015561abf3ebbdd 301 SUPERFAMILY SSF64182 1 297 8.63E-67 T 28-03-2018 AL549_RS02940 75174dd73f29b49bdf6677518bac0a1a 315 Gene3D G3DSA:3.40.190.10 87 177 4.8E-15 T 28-03-2018 AL549_RS02940 75174dd73f29b49bdf6677518bac0a1a 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS02940 75174dd73f29b49bdf6677518bac0a1a 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS02940 75174dd73f29b49bdf6677518bac0a1a 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS02940 75174dd73f29b49bdf6677518bac0a1a 315 SUPERFAMILY SSF53850 89 295 8.69E-41 T 28-03-2018 AL549_RS02940 75174dd73f29b49bdf6677518bac0a1a 315 Pfam PF03466 LysR substrate binding domain 88 294 1.3E-39 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS02940 75174dd73f29b49bdf6677518bac0a1a 315 SUPERFAMILY SSF46785 4 112 3.01E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02940 75174dd73f29b49bdf6677518bac0a1a 315 Gene3D G3DSA:1.10.10.10 3 86 3.7E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02940 75174dd73f29b49bdf6677518bac0a1a 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.8E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS02940 75174dd73f29b49bdf6677518bac0a1a 315 Gene3D G3DSA:3.40.190.10 178 264 2.3E-21 T 28-03-2018 AL549_RS22610 48d5baf2e630c0eb8f97f6577c7a5733 207 Pfam PF00625 Guanylate kinase 5 185 7.0E-61 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AL549_RS22610 48d5baf2e630c0eb8f97f6577c7a5733 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.717 T 28-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AL549_RS22610 48d5baf2e630c0eb8f97f6577c7a5733 207 SMART SM00072 3 187 2.2E-73 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AL549_RS22610 48d5baf2e630c0eb8f97f6577c7a5733 207 Gene3D G3DSA:3.40.50.300 1 51 4.6E-4 T 28-03-2018 AL549_RS22610 48d5baf2e630c0eb8f97f6577c7a5733 207 SUPERFAMILY SSF52540 3 189 2.65E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS22610 48d5baf2e630c0eb8f97f6577c7a5733 207 Gene3D G3DSA:3.40.50.300 84 187 1.3E-31 T 28-03-2018 AL549_RS22610 48d5baf2e630c0eb8f97f6577c7a5733 207 Gene3D G3DSA:3.30.63.10 52 83 5.9E-27 T 28-03-2018 AL549_RS22610 48d5baf2e630c0eb8f97f6577c7a5733 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 6.2E-76 T 28-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AL549_RS22610 48d5baf2e630c0eb8f97f6577c7a5733 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 28-03-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 SMART SM00387 595 712 1.0E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 SUPERFAMILY SSF103190 51 269 2.9E-69 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 SMART SM00448 734 846 6.1E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 SMART SM00388 483 548 1.9E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 Gene3D G3DSA:3.40.50.2300 719 854 7.2E-35 T 28-03-2018 AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 SUPERFAMILY SSF47384 471 549 6.28E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 651 2.0E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 665 2.0E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 672 690 2.0E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 696 709 2.0E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 Pfam PF09308 LuxQ, periplasmic 40 277 5.4E-102 T 28-03-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 Gene3D G3DSA:1.10.287.130 478 544 7.1E-17 T 28-03-2018 AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 SUPERFAMILY SSF55874 537 710 8.25E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 12 360 0.0 T 28-03-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 Pfam PF00072 Response regulator receiver domain 736 845 1.2E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 SUPERFAMILY SSF52172 732 853 1.85E-32 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 Gene3D G3DSA:3.30.450.20 339 477 4.6E-10 T 28-03-2018 AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 SUPERFAMILY SSF55785 347 461 3.64E-6 T 28-03-2018 IPR000014 PAS domain AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 Pfam PF00512 His Kinase A (phospho-acceptor) domain 484 548 2.0E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 Gene3D G3DSA:3.30.565.10 552 718 4.2E-47 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS03995 f1e5560f39f01a353e1cc5638fb1fdd7 857 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 595 711 1.1E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS19605 f3d04e9b353e513734e8301bbc398c5f 102 Gene3D G3DSA:1.20.58.80 1 99 4.5E-34 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AL549_RS19605 f3d04e9b353e513734e8301bbc398c5f 102 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 98 3.6E-33 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AL549_RS19605 f3d04e9b353e513734e8301bbc398c5f 102 SUPERFAMILY SSF46973 2 98 2.09E-33 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AL549_RS19605 f3d04e9b353e513734e8301bbc398c5f 102 PIRSF PIRSF000699 1 102 8.5E-37 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AL549_RS08580 d62ffa85d62448cf545aa366c3724326 179 Pfam PF11810 Domain of unknown function (DUF3332) 5 175 1.9E-43 T 28-03-2018 IPR021768 Protein of unknown function DUF3332 AL549_RS11305 b05843a5135654f783f49f9c0ada3a31 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 1.7E-95 T 28-03-2018 IPR014319 Phage shock protein, PspA AL549_RS11305 b05843a5135654f783f49f9c0ada3a31 223 Pfam PF04012 PspA/IM30 family 2 217 6.7E-61 T 28-03-2018 IPR007157 PspA/IM30 AL549_RS11305 b05843a5135654f783f49f9c0ada3a31 223 Gene3D G3DSA:1.20.1170.10 4 223 4.0E-7 T 28-03-2018 AL549_RS11155 bc7573910a8eb62a8ac878eb948a1ceb 404 SUPERFAMILY SSF109604 181 400 4.39E-43 T 28-03-2018 AL549_RS11155 bc7573910a8eb62a8ac878eb948a1ceb 404 Pfam PF08668 HDOD domain 205 319 3.0E-12 T 28-03-2018 IPR013976 Metal-dependent hydrolase HDOD AL549_RS11155 bc7573910a8eb62a8ac878eb948a1ceb 404 SMART SM00052 2 195 1.1E-4 T 28-03-2018 IPR001633 EAL domain AL549_RS11155 bc7573910a8eb62a8ac878eb948a1ceb 404 PIRSF PIRSF003180 1 403 5.8E-171 T 28-03-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AL549_RS11155 bc7573910a8eb62a8ac878eb948a1ceb 404 Gene3D G3DSA:1.10.3210.10 193 336 4.4E-14 T 28-03-2018 AL549_RS11155 bc7573910a8eb62a8ac878eb948a1ceb 404 SUPERFAMILY SSF141868 5 193 3.79E-30 T 28-03-2018 IPR001633 EAL domain AL549_RS11155 bc7573910a8eb62a8ac878eb948a1ceb 404 Gene3D G3DSA:3.20.20.450 4 192 6.1E-23 T 28-03-2018 IPR001633 EAL domain AL549_RS11155 bc7573910a8eb62a8ac878eb948a1ceb 404 Pfam PF00563 EAL domain 75 190 7.2E-17 T 28-03-2018 IPR001633 EAL domain AL549_RS16700 38f0b5ee280e38a552af7e60a429274c 260 Pfam PF01925 Sulfite exporter TauE/SafE 12 251 2.2E-45 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL549_RS02950 9f58a67f595f37912b4b5a77095939bd 259 Pfam PF00970 Oxidoreductase FAD-binding domain 28 101 3.7E-7 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AL549_RS02950 9f58a67f595f37912b4b5a77095939bd 259 SUPERFAMILY SSF52343 117 259 5.76E-35 T 28-03-2018 AL549_RS02950 9f58a67f595f37912b4b5a77095939bd 259 Gene3D G3DSA:3.40.50.80 115 259 1.1E-24 T 28-03-2018 AL549_RS02950 9f58a67f595f37912b4b5a77095939bd 259 Pfam PF00175 Oxidoreductase NAD-binding domain 124 234 4.8E-17 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL549_RS02950 9f58a67f595f37912b4b5a77095939bd 259 Gene3D G3DSA:2.40.30.10 5 106 3.1E-14 T 28-03-2018 AL549_RS02950 9f58a67f595f37912b4b5a77095939bd 259 SUPERFAMILY SSF63380 12 107 2.89E-18 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL549_RS19350 e302b638d54fd031d9662cacf5f03309 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.375 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL549_RS19350 e302b638d54fd031d9662cacf5f03309 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 28-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL549_RS19350 e302b638d54fd031d9662cacf5f03309 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 7.6E-199 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL549_RS19350 e302b638d54fd031d9662cacf5f03309 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 3.5E-43 T 28-03-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL549_RS19350 e302b638d54fd031d9662cacf5f03309 384 PIRSF PIRSF000497 1 381 4.3E-175 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL549_RS19350 e302b638d54fd031d9662cacf5f03309 384 Gene3D G3DSA:3.30.300.10 134 233 8.7E-43 T 28-03-2018 AL549_RS19350 e302b638d54fd031d9662cacf5f03309 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 3.6E-46 T 28-03-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL549_RS19350 e302b638d54fd031d9662cacf5f03309 384 SUPERFAMILY SSF55973 111 232 1.26E-52 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL549_RS19350 e302b638d54fd031d9662cacf5f03309 384 SUPERFAMILY SSF55973 3 109 1.61E-47 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL549_RS19350 e302b638d54fd031d9662cacf5f03309 384 Gene3D G3DSA:3.30.300.10 11 133 2.3E-45 T 28-03-2018 AL549_RS19350 e302b638d54fd031d9662cacf5f03309 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 6.1E-69 T 28-03-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL549_RS19350 e302b638d54fd031d9662cacf5f03309 384 SUPERFAMILY SSF55973 233 382 1.53E-70 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL549_RS19350 e302b638d54fd031d9662cacf5f03309 384 Gene3D G3DSA:3.30.300.10 246 383 1.4E-47 T 28-03-2018 AL549_RS19350 e302b638d54fd031d9662cacf5f03309 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 28-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL549_RS04665 025fe075dd2bb902bceb2c66e60c8aa3 200 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 171 1.2E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS04665 025fe075dd2bb902bceb2c66e60c8aa3 200 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 133 149 1.2E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS04665 025fe075dd2bb902bceb2c66e60c8aa3 200 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 1.2E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS04665 025fe075dd2bb902bceb2c66e60c8aa3 200 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 63 189 3.4E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS04665 025fe075dd2bb902bceb2c66e60c8aa3 200 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 9 189 1.1E-62 T 28-03-2018 IPR010976 Beta-phosphoglucomutase hydrolase AL549_RS04665 025fe075dd2bb902bceb2c66e60c8aa3 200 Gene3D G3DSA:1.10.150.240 24 78 1.8E-9 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AL549_RS04665 025fe075dd2bb902bceb2c66e60c8aa3 200 Gene3D G3DSA:3.40.50.1000 79 195 2.8E-20 T 28-03-2018 IPR023214 HAD-like domain AL549_RS04665 025fe075dd2bb902bceb2c66e60c8aa3 200 SUPERFAMILY SSF56784 10 195 4.07E-43 T 28-03-2018 IPR023214 HAD-like domain AL549_RS04665 025fe075dd2bb902bceb2c66e60c8aa3 200 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 189 6.4E-27 T 28-03-2018 IPR023214 HAD-like domain AL549_RS07105 56d1d9da8112cfaca4ae4e239a8b89fe 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.5E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS07105 56d1d9da8112cfaca4ae4e239a8b89fe 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.5E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS07105 56d1d9da8112cfaca4ae4e239a8b89fe 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.5E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS07105 56d1d9da8112cfaca4ae4e239a8b89fe 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 1.5E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS07105 56d1d9da8112cfaca4ae4e239a8b89fe 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 1.1E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS07105 56d1d9da8112cfaca4ae4e239a8b89fe 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 22 194 2.7E-21 T 28-03-2018 IPR023214 HAD-like domain AL549_RS07105 56d1d9da8112cfaca4ae4e239a8b89fe 224 Gene3D G3DSA:1.10.150.240 15 85 1.3E-19 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AL549_RS07105 56d1d9da8112cfaca4ae4e239a8b89fe 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 4.3E-80 T 28-03-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 AL549_RS07105 56d1d9da8112cfaca4ae4e239a8b89fe 224 Gene3D G3DSA:3.40.50.1000 86 224 9.1E-33 T 28-03-2018 IPR023214 HAD-like domain AL549_RS07105 56d1d9da8112cfaca4ae4e239a8b89fe 224 SUPERFAMILY SSF56784 2 222 4.58E-50 T 28-03-2018 IPR023214 HAD-like domain AL549_RS07105 56d1d9da8112cfaca4ae4e239a8b89fe 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 195 7.5E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS11285 2a382ac0e605de57faacc62f5f76efe9 295 Gene3D G3DSA:1.10.3720.10 18 284 9.8E-34 T 28-03-2018 AL549_RS11285 2a382ac0e605de57faacc62f5f76efe9 295 SUPERFAMILY SSF161098 89 276 2.62E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS11285 2a382ac0e605de57faacc62f5f76efe9 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 4.8E-15 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL549_RS11285 2a382ac0e605de57faacc62f5f76efe9 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 1.0E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS20410 fee09be2a2ee7f0be0ffe905bac33747 403 Pfam PF00202 Aminotransferase class-III 22 399 3.8E-127 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL549_RS20410 fee09be2a2ee7f0be0ffe905bac33747 403 Gene3D G3DSA:3.40.640.10 59 288 3.6E-78 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS20410 fee09be2a2ee7f0be0ffe905bac33747 403 Gene3D G3DSA:3.90.1150.10 289 403 3.4E-31 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS20410 fee09be2a2ee7f0be0ffe905bac33747 403 PIRSF PIRSF000521 172 402 2.5E-36 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL549_RS20410 fee09be2a2ee7f0be0ffe905bac33747 403 PIRSF PIRSF000521 27 155 2.0E-6 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL549_RS20410 fee09be2a2ee7f0be0ffe905bac33747 403 SUPERFAMILY SSF53383 16 400 2.45E-129 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS20410 fee09be2a2ee7f0be0ffe905bac33747 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL549_RS20410 fee09be2a2ee7f0be0ffe905bac33747 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 400 46.401 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AL549_RS20410 fee09be2a2ee7f0be0ffe905bac33747 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 1.6E-207 T 28-03-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 AL549_RS20410 fee09be2a2ee7f0be0ffe905bac33747 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 9.4E-152 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AL549_RS01160 41c023b27e8310fc94592836e00621a7 279 SUPERFAMILY SSF46689 229 278 1.34E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS01160 41c023b27e8310fc94592836e00621a7 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 2.0E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS01160 41c023b27e8310fc94592836e00621a7 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 2.0E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS01160 41c023b27e8310fc94592836e00621a7 279 Gene3D G3DSA:2.60.120.10 16 232 5.2E-19 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS01160 41c023b27e8310fc94592836e00621a7 279 SUPERFAMILY SSF46689 179 226 2.69E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS01160 41c023b27e8310fc94592836e00621a7 279 Pfam PF12833 Helix-turn-helix domain 199 277 5.0E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS01160 41c023b27e8310fc94592836e00621a7 279 Gene3D G3DSA:1.10.10.60 233 279 1.8E-12 T 28-03-2018 AL549_RS01160 41c023b27e8310fc94592836e00621a7 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL549_RS01160 41c023b27e8310fc94592836e00621a7 279 SMART SM00342 193 276 3.0E-31 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS14065 52d568d90e4d623991b5e5ee597aedad 71 Pfam PF11665 Protein of unknown function (DUF3265) 19 46 9.4E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS20585 0db3ef153d27f4da7d06d15d593c13c6 352 Gene3D G3DSA:2.40.50.140 36 102 9.9E-14 T 28-03-2018 AL549_RS20585 0db3ef153d27f4da7d06d15d593c13c6 352 Gene3D G3DSA:3.40.50.300 112 274 1.2E-27 T 28-03-2018 AL549_RS20585 0db3ef153d27f4da7d06d15d593c13c6 352 Pfam PF03193 RsgA GTPase 100 275 2.9E-58 T 28-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AL549_RS20585 0db3ef153d27f4da7d06d15d593c13c6 352 SUPERFAMILY SSF52540 114 337 1.78E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20585 0db3ef153d27f4da7d06d15d593c13c6 352 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 75 333 1.8E-89 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AL549_RS20585 0db3ef153d27f4da7d06d15d593c13c6 352 Gene3D G3DSA:1.10.40.50 276 344 2.1E-22 T 28-03-2018 AL549_RS20585 0db3ef153d27f4da7d06d15d593c13c6 352 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 41 339 37.666 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AL549_RS09220 b03d4a597312b87d6ed8743043d67614 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AL549_RS09220 b03d4a597312b87d6ed8743043d67614 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 1.4E-50 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AL549_RS09220 b03d4a597312b87d6ed8743043d67614 169 SUPERFAMILY SSF51261 18 166 1.5E-55 T 28-03-2018 IPR011055 Duplicated hybrid motif AL549_RS09220 b03d4a597312b87d6ed8743043d67614 169 Gene3D G3DSA:2.70.70.10 9 169 1.5E-57 T 28-03-2018 AL549_RS09220 b03d4a597312b87d6ed8743043d67614 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 1.8E-49 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AL549_RS08640 faeacaab3881840c69707ebb87565b96 156 SUPERFAMILY SSF52121 4 154 1.03E-59 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS08640 faeacaab3881840c69707ebb87565b96 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 3.5E-54 T 28-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS08640 faeacaab3881840c69707ebb87565b96 156 Gene3D G3DSA:3.40.50.960 1 155 6.2E-63 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS08640 faeacaab3881840c69707ebb87565b96 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.189 T 28-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS08640 faeacaab3881840c69707ebb87565b96 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 8.9E-57 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS21645 168c276418650b859d1625358f5991d8 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 28-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL549_RS21645 168c276418650b859d1625358f5991d8 723 Gene3D G3DSA:1.10.1040.10 504 593 1.4E-22 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL549_RS21645 168c276418650b859d1625358f5991d8 723 Gene3D G3DSA:3.90.226.10 2 204 5.7E-52 T 28-03-2018 AL549_RS21645 168c276418650b859d1625358f5991d8 723 SUPERFAMILY SSF52096 2 304 6.76E-67 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS21645 168c276418650b859d1625358f5991d8 723 SUPERFAMILY SSF48179 496 607 1.02E-28 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL549_RS21645 168c276418650b859d1625358f5991d8 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.429 T 28-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL549_RS21645 168c276418650b859d1625358f5991d8 723 SUPERFAMILY SSF48179 625 715 1.19E-24 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL549_RS21645 168c276418650b859d1625358f5991d8 723 Gene3D G3DSA:3.40.50.720 257 496 1.7E-60 T 28-03-2018 AL549_RS21645 168c276418650b859d1625358f5991d8 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 28-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL549_RS21645 168c276418650b859d1625358f5991d8 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 1.3E-25 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL549_RS21645 168c276418650b859d1625358f5991d8 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 711 2.8E-5 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL549_RS21645 168c276418650b859d1625358f5991d8 723 Gene3D G3DSA:1.10.1040.10 623 721 6.9E-18 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL549_RS21645 168c276418650b859d1625358f5991d8 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 8.6E-59 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL549_RS21645 168c276418650b859d1625358f5991d8 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 209 8.0E-40 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL549_RS21645 168c276418650b859d1625358f5991d8 723 SUPERFAMILY SSF51735 314 496 7.3E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS22705 658e75b1198924c353e4bff213d5d76c 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 48.128 T 28-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AL549_RS22705 658e75b1198924c353e4bff213d5d76c 238 SUPERFAMILY SSF54211 1 181 8.6E-45 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS22705 658e75b1198924c353e4bff213d5d76c 238 SUPERFAMILY SSF55666 153 236 1.14E-25 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL549_RS22705 658e75b1198924c353e4bff213d5d76c 238 Gene3D G3DSA:3.30.230.70 1 238 2.6E-60 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL549_RS22705 658e75b1198924c353e4bff213d5d76c 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 7.0E-24 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL549_RS22705 658e75b1198924c353e4bff213d5d76c 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 28-03-2018 IPR018336 Ribonuclease PH, conserved site AL549_RS22705 658e75b1198924c353e4bff213d5d76c 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.8E-111 T 28-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AL549_RS22705 658e75b1198924c353e4bff213d5d76c 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 9.6E-11 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL549_RS22415 8a51775a76da460e6116335bcbdf97da 469 SMART SM01230 102 379 1.7E-155 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL549_RS22415 8a51775a76da460e6116335bcbdf97da 469 SUPERFAMILY SSF54368 3 100 1.26E-35 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL549_RS22415 8a51775a76da460e6116335bcbdf97da 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 28-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AL549_RS22415 8a51775a76da460e6116335bcbdf97da 469 Gene3D G3DSA:3.30.590.10 105 457 7.2E-126 T 28-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AL549_RS22415 8a51775a76da460e6116335bcbdf97da 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 2.1E-213 T 28-03-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL549_RS22415 8a51775a76da460e6116335bcbdf97da 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 6.4E-141 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL549_RS22415 8a51775a76da460e6116335bcbdf97da 469 Gene3D G3DSA:3.10.20.70 2 104 2.3E-27 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL549_RS22415 8a51775a76da460e6116335bcbdf97da 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 28-03-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AL549_RS22415 8a51775a76da460e6116335bcbdf97da 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 28-03-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL549_RS22415 8a51775a76da460e6116335bcbdf97da 469 SUPERFAMILY SSF55931 102 468 5.4E-140 T 28-03-2018 AL549_RS22415 8a51775a76da460e6116335bcbdf97da 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.5E-30 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL549_RS19855 504df66ce16e2c977d95aecd960e74ee 667 Pfam PF00990 Diguanylate cyclase, GGDEF domain 231 383 1.9E-19 T 28-03-2018 IPR000160 GGDEF domain AL549_RS19855 504df66ce16e2c977d95aecd960e74ee 667 SUPERFAMILY SSF141868 430 638 1.7E-36 T 28-03-2018 IPR001633 EAL domain AL549_RS19855 504df66ce16e2c977d95aecd960e74ee 667 Gene3D G3DSA:3.20.20.450 396 642 2.2E-38 T 28-03-2018 IPR001633 EAL domain AL549_RS19855 504df66ce16e2c977d95aecd960e74ee 667 SMART SM00267 218 388 1.4E-7 T 28-03-2018 IPR000160 GGDEF domain AL549_RS19855 504df66ce16e2c977d95aecd960e74ee 667 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 41 135 6.9E-28 T 28-03-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 AL549_RS19855 504df66ce16e2c977d95aecd960e74ee 667 SMART SM00052 399 641 3.3E-16 T 28-03-2018 IPR001633 EAL domain AL549_RS19855 504df66ce16e2c977d95aecd960e74ee 667 Pfam PF00563 EAL domain 432 638 3.2E-45 T 28-03-2018 IPR001633 EAL domain AL549_RS19855 504df66ce16e2c977d95aecd960e74ee 667 SUPERFAMILY SSF55073 235 388 1.18E-17 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS19855 504df66ce16e2c977d95aecd960e74ee 667 Gene3D G3DSA:3.30.70.270 224 395 2.8E-20 T 28-03-2018 AL549_RS01670 96428044085ffe0f334ad1dc39176fa0 1203 Gene3D G3DSA:2.60.40.1130 291 407 5.4E-16 T 28-03-2018 AL549_RS01670 96428044085ffe0f334ad1dc39176fa0 1203 SUPERFAMILY SSF51011 1095 1203 2.59E-27 T 28-03-2018 AL549_RS01670 96428044085ffe0f334ad1dc39176fa0 1203 SUPERFAMILY SSF81296 284 408 5.74E-19 T 28-03-2018 IPR014756 Immunoglobulin E-set AL549_RS01670 96428044085ffe0f334ad1dc39176fa0 1203 SUPERFAMILY SSF49452 14 161 4.91E-28 T 28-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AL549_RS01670 96428044085ffe0f334ad1dc39176fa0 1203 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 291 1203 0.0 T 28-03-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 AL549_RS01670 96428044085ffe0f334ad1dc39176fa0 1203 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 418 503 1.2E-13 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 AL549_RS01670 96428044085ffe0f334ad1dc39176fa0 1203 Gene3D G3DSA:2.60.40.1110 25 161 3.8E-22 T 28-03-2018 AL549_RS01670 96428044085ffe0f334ad1dc39176fa0 1203 Gene3D G3DSA:2.60.40.1110 166 277 4.4E-17 T 28-03-2018 AL549_RS01670 96428044085ffe0f334ad1dc39176fa0 1203 Pfam PF11852 Domain of unknown function (DUF3372) 1030 1201 4.7E-50 T 28-03-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal AL549_RS01670 96428044085ffe0f334ad1dc39176fa0 1203 Gene3D G3DSA:2.60.40.1180 1115 1203 8.0E-27 T 28-03-2018 AL549_RS01670 96428044085ffe0f334ad1dc39176fa0 1203 Gene3D G3DSA:2.60.40.10 409 517 2.8E-22 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS01670 96428044085ffe0f334ad1dc39176fa0 1203 Pfam PF03714 Bacterial pullanase-associated domain 48 161 1.5E-12 T 28-03-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 AL549_RS01670 96428044085ffe0f334ad1dc39176fa0 1203 Pfam PF03714 Bacterial pullanase-associated domain 174 278 3.7E-11 T 28-03-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 AL549_RS01670 96428044085ffe0f334ad1dc39176fa0 1203 SUPERFAMILY SSF51445 515 1093 3.34E-130 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS01670 96428044085ffe0f334ad1dc39176fa0 1203 SUPERFAMILY SSF49452 168 278 1.77E-30 T 28-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AL549_RS01670 96428044085ffe0f334ad1dc39176fa0 1203 Gene3D G3DSA:3.20.20.80 518 1114 1.2E-86 T 28-03-2018 AL549_RS01670 96428044085ffe0f334ad1dc39176fa0 1203 SUPERFAMILY SSF81296 418 521 2.1E-21 T 28-03-2018 IPR014756 Immunoglobulin E-set AL549_RS20870 f47984be0857dbca6063939165e2d8b7 132 Gene3D G3DSA:1.10.1660.10 1 57 6.0E-22 T 28-03-2018 AL549_RS20870 f47984be0857dbca6063939165e2d8b7 132 Pfam PF00376 MerR family regulatory protein 4 40 5.1E-16 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS20870 f47984be0857dbca6063939165e2d8b7 132 Gene3D G3DSA:1.10.1660.10 58 132 5.4E-19 T 28-03-2018 AL549_RS20870 f47984be0857dbca6063939165e2d8b7 132 Pfam PF09278 MerR, DNA binding 47 109 2.5E-17 T 28-03-2018 IPR015358 Transcription regulator MerR, DNA binding AL549_RS20870 f47984be0857dbca6063939165e2d8b7 132 SMART SM00422 2 71 4.7E-28 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS20870 f47984be0857dbca6063939165e2d8b7 132 SUPERFAMILY SSF46955 2 120 1.94E-33 T 28-03-2018 IPR009061 Putative DNA-binding domain AL549_RS20870 f47984be0857dbca6063939165e2d8b7 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 3.5E-66 T 28-03-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 AL549_RS20870 f47984be0857dbca6063939165e2d8b7 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.4E-10 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS20870 f47984be0857dbca6063939165e2d8b7 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.4E-10 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS20870 f47984be0857dbca6063939165e2d8b7 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.4E-10 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS04730 c26c693d13376aa3d9353c8cffde71dd 446 Gene3D G3DSA:1.20.1250.20 19 216 8.4E-35 T 28-03-2018 AL549_RS04730 c26c693d13376aa3d9353c8cffde71dd 446 Pfam PF07690 Major Facilitator Superfamily 36 396 5.2E-49 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS04730 c26c693d13376aa3d9353c8cffde71dd 446 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 6.1E-141 T 28-03-2018 AL549_RS04730 c26c693d13376aa3d9353c8cffde71dd 446 PIRSF PIRSF002808 6 443 4.1E-145 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AL549_RS04730 c26c693d13376aa3d9353c8cffde71dd 446 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 28-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 AL549_RS04730 c26c693d13376aa3d9353c8cffde71dd 446 Gene3D G3DSA:1.20.1250.20 238 441 9.7E-27 T 28-03-2018 AL549_RS04730 c26c693d13376aa3d9353c8cffde71dd 446 SUPERFAMILY SSF103473 10 431 6.93E-81 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS06330 42a11f0e836d39acaa4251f398f2edfa 642 Pfam PF00563 EAL domain 391 625 1.1E-74 T 28-03-2018 IPR001633 EAL domain AL549_RS06330 42a11f0e836d39acaa4251f398f2edfa 642 Gene3D G3DSA:3.30.70.270 216 383 2.1E-36 T 28-03-2018 AL549_RS06330 42a11f0e836d39acaa4251f398f2edfa 642 Pfam PF01590 GAF domain 32 156 2.3E-6 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL549_RS06330 42a11f0e836d39acaa4251f398f2edfa 642 SMART SM00065 26 173 2.6E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL549_RS06330 42a11f0e836d39acaa4251f398f2edfa 642 SMART SM00267 204 374 1.1E-23 T 28-03-2018 IPR000160 GGDEF domain AL549_RS06330 42a11f0e836d39acaa4251f398f2edfa 642 SUPERFAMILY SSF55073 220 368 2.04E-27 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS06330 42a11f0e836d39acaa4251f398f2edfa 642 Gene3D G3DSA:3.20.20.450 384 642 6.4E-96 T 28-03-2018 IPR001633 EAL domain AL549_RS06330 42a11f0e836d39acaa4251f398f2edfa 642 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 216 370 2.2E-17 T 28-03-2018 IPR000160 GGDEF domain AL549_RS06330 42a11f0e836d39acaa4251f398f2edfa 642 SUPERFAMILY SSF55781 31 176 7.52E-21 T 28-03-2018 IPR029016 GAF domain-like AL549_RS06330 42a11f0e836d39acaa4251f398f2edfa 642 SMART SM00052 384 631 2.8E-116 T 28-03-2018 IPR001633 EAL domain AL549_RS06330 42a11f0e836d39acaa4251f398f2edfa 642 Pfam PF00990 Diguanylate cyclase, GGDEF domain 216 368 5.3E-28 T 28-03-2018 IPR000160 GGDEF domain AL549_RS06330 42a11f0e836d39acaa4251f398f2edfa 642 SUPERFAMILY SSF141868 389 638 2.88E-87 T 28-03-2018 IPR001633 EAL domain AL549_RS06330 42a11f0e836d39acaa4251f398f2edfa 642 Gene3D G3DSA:3.30.450.40 18 195 1.7E-19 T 28-03-2018 IPR029016 GAF domain-like AL549_RS18085 cb2ca8ac1fb5840a34292eb910a037cc 199 Pfam PF01965 DJ-1/PfpI family 3 169 1.9E-37 T 28-03-2018 IPR002818 DJ-1/PfpI AL549_RS18085 cb2ca8ac1fb5840a34292eb910a037cc 199 SUPERFAMILY SSF52317 3 192 2.95E-44 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS18085 cb2ca8ac1fb5840a34292eb910a037cc 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 184 2.8E-62 T 28-03-2018 IPR006287 Protein DJ-1 AL549_RS18085 cb2ca8ac1fb5840a34292eb910a037cc 199 Gene3D G3DSA:3.40.50.880 1 194 7.9E-39 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS18600 b8747e6607240fd926d118f9024654ac 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 367 3.0E-30 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18600 b8747e6607240fd926d118f9024654ac 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 8.9E-15 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18600 b8747e6607240fd926d118f9024654ac 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 8.9E-15 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18600 b8747e6607240fd926d118f9024654ac 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 8.9E-15 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18600 b8747e6607240fd926d118f9024654ac 446 SUPERFAMILY SSF53738 4 182 1.14E-48 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18600 b8747e6607240fd926d118f9024654ac 446 SUPERFAMILY SSF53738 259 366 4.32E-29 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18600 b8747e6607240fd926d118f9024654ac 446 SUPERFAMILY SSF55957 359 445 5.76E-21 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18600 b8747e6607240fd926d118f9024654ac 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 4.2E-203 T 28-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18600 b8747e6607240fd926d118f9024654ac 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 137 9.3E-46 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18600 b8747e6607240fd926d118f9024654ac 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18600 b8747e6607240fd926d118f9024654ac 446 Gene3D G3DSA:3.40.120.10 157 270 2.5E-33 T 28-03-2018 AL549_RS18600 b8747e6607240fd926d118f9024654ac 446 SUPERFAMILY SSF53738 157 257 1.02E-29 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18600 b8747e6607240fd926d118f9024654ac 446 Gene3D G3DSA:3.40.120.10 271 374 9.9E-27 T 28-03-2018 AL549_RS18600 b8747e6607240fd926d118f9024654ac 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.868 T 28-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18600 b8747e6607240fd926d118f9024654ac 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 8.4E-19 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18600 b8747e6607240fd926d118f9024654ac 446 Gene3D G3DSA:3.30.310.50 375 446 1.7E-17 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18600 b8747e6607240fd926d118f9024654ac 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 2.4E-12 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS18600 b8747e6607240fd926d118f9024654ac 446 Gene3D G3DSA:3.40.120.10 4 155 9.9E-50 T 28-03-2018 AL549_RS13265 7a142345662b8079f6919d0adaf3176a 185 Pfam PF13302 Acetyltransferase (GNAT) domain 7 149 7.5E-35 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS13265 7a142345662b8079f6919d0adaf3176a 185 SUPERFAMILY SSF55729 2 175 4.01E-41 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS13265 7a142345662b8079f6919d0adaf3176a 185 Gene3D G3DSA:3.40.630.30 1 184 2.2E-28 T 28-03-2018 AL549_RS14150 7a142345662b8079f6919d0adaf3176a 185 Pfam PF13302 Acetyltransferase (GNAT) domain 7 149 7.5E-35 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS14150 7a142345662b8079f6919d0adaf3176a 185 SUPERFAMILY SSF55729 2 175 4.01E-41 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS14150 7a142345662b8079f6919d0adaf3176a 185 Gene3D G3DSA:3.40.630.30 1 184 2.2E-28 T 28-03-2018 AL549_RS08690 9e327cdb9c562b2cba980c003c810799 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.8E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS08690 9e327cdb9c562b2cba980c003c810799 307 Pfam PF03466 LysR substrate binding domain 91 289 7.1E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS08690 9e327cdb9c562b2cba980c003c810799 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS08690 9e327cdb9c562b2cba980c003c810799 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS08690 9e327cdb9c562b2cba980c003c810799 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS08690 9e327cdb9c562b2cba980c003c810799 307 SUPERFAMILY SSF53850 92 294 6.7E-38 T 28-03-2018 AL549_RS08690 9e327cdb9c562b2cba980c003c810799 307 Gene3D G3DSA:3.40.190.10 177 263 1.5E-21 T 28-03-2018 AL549_RS08690 9e327cdb9c562b2cba980c003c810799 307 Gene3D G3DSA:3.40.190.10 91 176 5.8E-18 T 28-03-2018 AL549_RS08690 9e327cdb9c562b2cba980c003c810799 307 Gene3D G3DSA:1.10.10.10 3 88 1.2E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS08690 9e327cdb9c562b2cba980c003c810799 307 SUPERFAMILY SSF46785 3 85 4.54E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS14955 9ced4c694432c26e84bd0eab5ffe110d 142 Pfam PF01797 Transposase IS200 like 11 130 2.7E-30 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL549_RS14955 9ced4c694432c26e84bd0eab5ffe110d 142 SMART SM01321 10 130 1.5E-30 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL549_RS14955 9ced4c694432c26e84bd0eab5ffe110d 142 Gene3D G3DSA:3.30.70.1290 1 137 2.6E-19 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL549_RS14955 9ced4c694432c26e84bd0eab5ffe110d 142 SUPERFAMILY SSF143422 1 131 2.09E-35 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL549_RS11670 550914d71d9ecb62d42cf80c0b9b6661 225 Pfam PF04172 LrgB-like family 6 218 7.9E-72 T 28-03-2018 IPR007300 CidB/LrgB family AL549_RS01990 f68716f7a8926108f3c76da9fa66df35 153 SUPERFAMILY SSF50341 2 141 5.1E-34 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS01990 f68716f7a8926108f3c76da9fa66df35 153 Gene3D G3DSA:2.30.30.40 2 40 1.3E-5 T 28-03-2018 AL549_RS01990 f68716f7a8926108f3c76da9fa66df35 153 Gene3D G3DSA:2.30.30.40 82 132 3.6E-11 T 28-03-2018 AL549_RS01990 f68716f7a8926108f3c76da9fa66df35 153 SMART SM00260 1 138 1.5E-29 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS01990 f68716f7a8926108f3c76da9fa66df35 153 Pfam PF01584 CheW-like domain 5 140 5.7E-32 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS01990 f68716f7a8926108f3c76da9fa66df35 153 Gene3D G3DSA:2.40.50.180 41 81 4.8E-15 T 28-03-2018 AL549_RS06345 f964dca1bf71d5c9b9c89177fcdcb637 588 SMART SM00448 1 118 3.1E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS06345 f964dca1bf71d5c9b9c89177fcdcb637 588 Gene3D G3DSA:3.20.20.450 133 382 1.6E-72 T 28-03-2018 IPR001633 EAL domain AL549_RS06345 f964dca1bf71d5c9b9c89177fcdcb637 588 SMART SM00421 528 585 2.3E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS06345 f964dca1bf71d5c9b9c89177fcdcb637 588 SUPERFAMILY SSF52172 397 526 2.99E-6 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS06345 f964dca1bf71d5c9b9c89177fcdcb637 588 Gene3D G3DSA:1.10.10.10 514 587 1.1E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS06345 f964dca1bf71d5c9b9c89177fcdcb637 588 SUPERFAMILY SSF52172 1 133 1.07E-26 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS06345 f964dca1bf71d5c9b9c89177fcdcb637 588 ProSitePatterns PS00622 LuxR-type HTH domain signature. 545 572 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS06345 f964dca1bf71d5c9b9c89177fcdcb637 588 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 561 573 1.7E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS06345 f964dca1bf71d5c9b9c89177fcdcb637 588 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 545 561 1.7E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS06345 f964dca1bf71d5c9b9c89177fcdcb637 588 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 531 545 1.7E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS06345 f964dca1bf71d5c9b9c89177fcdcb637 588 Pfam PF00563 EAL domain 140 370 9.6E-65 T 28-03-2018 IPR001633 EAL domain AL549_RS06345 f964dca1bf71d5c9b9c89177fcdcb637 588 SUPERFAMILY SSF46894 522 585 1.26E-16 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS06345 f964dca1bf71d5c9b9c89177fcdcb637 588 Gene3D G3DSA:3.40.50.2300 1 132 3.9E-29 T 28-03-2018 AL549_RS06345 f964dca1bf71d5c9b9c89177fcdcb637 588 Gene3D G3DSA:3.40.50.2300 383 513 3.9E-8 T 28-03-2018 AL549_RS06345 f964dca1bf71d5c9b9c89177fcdcb637 588 Pfam PF00196 Bacterial regulatory proteins, luxR family 530 584 7.6E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS06345 f964dca1bf71d5c9b9c89177fcdcb637 588 SMART SM00052 134 375 1.5E-67 T 28-03-2018 IPR001633 EAL domain AL549_RS06345 f964dca1bf71d5c9b9c89177fcdcb637 588 SUPERFAMILY SSF141868 141 384 2.48E-71 T 28-03-2018 IPR001633 EAL domain AL549_RS06345 f964dca1bf71d5c9b9c89177fcdcb637 588 Pfam PF00072 Response regulator receiver domain 3 118 2.5E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS07675 3d6ea4e8171c1dd90bbaccc2b52ed5ed 593 SUPERFAMILY SSF55785 171 263 8.72E-6 T 28-03-2018 IPR000014 PAS domain AL549_RS07675 3d6ea4e8171c1dd90bbaccc2b52ed5ed 593 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 410 578 1.7E-49 T 28-03-2018 IPR000160 GGDEF domain AL549_RS07675 3d6ea4e8171c1dd90bbaccc2b52ed5ed 593 SUPERFAMILY SSF55785 268 394 1.71E-19 T 28-03-2018 IPR000014 PAS domain AL549_RS07675 3d6ea4e8171c1dd90bbaccc2b52ed5ed 593 SUPERFAMILY SSF55073 419 578 1.52E-46 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS07675 3d6ea4e8171c1dd90bbaccc2b52ed5ed 593 Pfam PF08448 PAS fold 287 397 5.7E-18 T 28-03-2018 IPR013656 PAS fold-4 AL549_RS07675 3d6ea4e8171c1dd90bbaccc2b52ed5ed 593 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 278 403 1.6E-13 T 28-03-2018 IPR000014 PAS domain AL549_RS07675 3d6ea4e8171c1dd90bbaccc2b52ed5ed 593 SMART SM00267 403 579 1.7E-68 T 28-03-2018 IPR000160 GGDEF domain AL549_RS07675 3d6ea4e8171c1dd90bbaccc2b52ed5ed 593 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 575 6.5E-49 T 28-03-2018 IPR000160 GGDEF domain AL549_RS07675 3d6ea4e8171c1dd90bbaccc2b52ed5ed 593 Gene3D G3DSA:3.30.70.270 422 585 9.0E-52 T 28-03-2018 AL549_RS07675 3d6ea4e8171c1dd90bbaccc2b52ed5ed 593 Gene3D G3DSA:3.30.450.20 161 278 4.2E-9 T 28-03-2018 AL549_RS07675 3d6ea4e8171c1dd90bbaccc2b52ed5ed 593 Gene3D G3DSA:3.30.450.20 279 421 1.4E-24 T 28-03-2018 AL549_RS07675 3d6ea4e8171c1dd90bbaccc2b52ed5ed 593 Gene3D G3DSA:3.30.450.20 35 144 0.13 T 28-03-2018 AL549_RS07675 3d6ea4e8171c1dd90bbaccc2b52ed5ed 593 SMART SM00091 160 225 25.0 T 28-03-2018 IPR000014 PAS domain AL549_RS07675 3d6ea4e8171c1dd90bbaccc2b52ed5ed 593 SMART SM00091 281 348 0.0026 T 28-03-2018 IPR000014 PAS domain AL549_RS07675 3d6ea4e8171c1dd90bbaccc2b52ed5ed 593 SMART SM00091 40 103 170.0 T 28-03-2018 IPR000014 PAS domain AL549_RS10495 7fa10907da3fade89b36772284a8bd66 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 589 8.7E-210 T 28-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AL549_RS10495 7fa10907da3fade89b36772284a8bd66 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 3.5E-9 T 28-03-2018 AL549_RS10495 7fa10907da3fade89b36772284a8bd66 610 SUPERFAMILY SSF82771 16 100 3.27E-23 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AL549_RS10495 7fa10907da3fade89b36772284a8bd66 610 Pfam PF02151 UvrB/uvrC motif 205 238 3.8E-8 T 28-03-2018 IPR001943 UVR domain GO:0005515 AL549_RS10495 7fa10907da3fade89b36772284a8bd66 610 Gene3D G3DSA:3.40.1440.10 7 101 1.2E-23 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AL549_RS10495 7fa10907da3fade89b36772284a8bd66 610 SUPERFAMILY SSF47781 521 609 2.67E-19 T 28-03-2018 IPR010994 RuvA domain 2-like AL549_RS10495 7fa10907da3fade89b36772284a8bd66 610 Gene3D G3DSA:1.10.150.20 554 610 4.7E-13 T 28-03-2018 AL549_RS10495 7fa10907da3fade89b36772284a8bd66 610 SMART SM00465 17 98 1.1E-22 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AL549_RS10495 7fa10907da3fade89b36772284a8bd66 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 389 542 4.1E-42 T 28-03-2018 IPR001162 UvrC family homology region AL549_RS10495 7fa10907da3fade89b36772284a8bd66 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 28.183 T 28-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AL549_RS10495 7fa10907da3fade89b36772284a8bd66 610 SUPERFAMILY SSF46600 190 243 1.23E-12 T 28-03-2018 IPR001943 UVR domain GO:0005515 AL549_RS10495 7fa10907da3fade89b36772284a8bd66 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 3.0E-12 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AL549_RS10495 7fa10907da3fade89b36772284a8bd66 610 Gene3D G3DSA:4.10.860.10 182 241 1.0E-11 T 28-03-2018 IPR001943 UVR domain GO:0005515 AL549_RS10495 7fa10907da3fade89b36772284a8bd66 610 SMART SM00278 556 575 0.24 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL549_RS10495 7fa10907da3fade89b36772284a8bd66 610 SMART SM00278 588 607 340.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL549_RS19455 601af6f81923a5c7e9121aa856320da4 350 Gene3D G3DSA:1.10.1670.10 118 224 6.3E-34 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AL549_RS19455 601af6f81923a5c7e9121aa856320da4 350 SMART SM00478 37 188 8.8E-46 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL549_RS19455 601af6f81923a5c7e9121aa856320da4 350 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 166 3.2E-21 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL549_RS19455 601af6f81923a5c7e9121aa856320da4 350 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 28-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AL549_RS19455 601af6f81923a5c7e9121aa856320da4 350 Gene3D G3DSA:3.90.79.10 228 350 5.5E-7 T 28-03-2018 AL549_RS19455 601af6f81923a5c7e9121aa856320da4 350 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 6.7E-4 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AL549_RS19455 601af6f81923a5c7e9121aa856320da4 350 SUPERFAMILY SSF48150 3 223 9.89E-75 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL549_RS19455 601af6f81923a5c7e9121aa856320da4 350 SMART SM00525 189 209 1.5E-4 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AL549_RS19455 601af6f81923a5c7e9121aa856320da4 350 SUPERFAMILY SSF55811 218 345 2.43E-26 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL549_RS19455 601af6f81923a5c7e9121aa856320da4 350 Pfam PF14815 NUDIX domain 232 343 7.1E-23 T 28-03-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AL549_RS19455 601af6f81923a5c7e9121aa856320da4 350 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 269 3.2E-125 T 28-03-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 AL549_RS19455 601af6f81923a5c7e9121aa856320da4 350 Gene3D G3DSA:1.10.340.30 19 117 2.1E-32 T 28-03-2018 AL549_RS01405 b30439e28ee021a23a5a748f4a920dea 317 Gene3D G3DSA:3.40.50.300 1 317 1.6E-72 T 28-03-2018 AL549_RS01405 b30439e28ee021a23a5a748f4a920dea 317 Pfam PF00005 ABC transporter 24 180 5.8E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS01405 b30439e28ee021a23a5a748f4a920dea 317 SUPERFAMILY SSF52540 4 251 7.73E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS01405 b30439e28ee021a23a5a748f4a920dea 317 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 316 6.2E-27 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS01405 b30439e28ee021a23a5a748f4a920dea 317 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 6.9E-18 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS01405 b30439e28ee021a23a5a748f4a920dea 317 SMART SM00382 33 230 1.1E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS01405 b30439e28ee021a23a5a748f4a920dea 317 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS16400 1e58ab6181f22aa9d04b150a00410778 387 SUPERFAMILY SSF52440 174 280 3.16E-40 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL549_RS16400 1e58ab6181f22aa9d04b150a00410778 387 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 9.2E-158 T 28-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AL549_RS16400 1e58ab6181f22aa9d04b150a00410778 387 SUPERFAMILY SSF56059 267 385 1.98E-87 T 28-03-2018 AL549_RS16400 1e58ab6181f22aa9d04b150a00410778 387 SUPERFAMILY SSF56059 2 169 1.98E-87 T 28-03-2018 AL549_RS18805 d69c835b6e6f61e76238c3428f20c1aa 820 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 817 0.0 T 28-03-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 AL549_RS18805 d69c835b6e6f61e76238c3428f20c1aa 820 SMART SM00490 226 327 1.5E-19 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS18805 d69c835b6e6f61e76238c3428f20c1aa 820 PIRSF PIRSF005496 1 819 0.0 T 28-03-2018 AL549_RS18805 d69c835b6e6f61e76238c3428f20c1aa 820 Pfam PF00271 Helicase conserved C-terminal domain 204 326 2.2E-15 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS18805 d69c835b6e6f61e76238c3428f20c1aa 820 SMART SM00487 2 186 1.1E-16 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS18805 d69c835b6e6f61e76238c3428f20c1aa 820 SUPERFAMILY SSF52540 10 477 5.35E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18805 d69c835b6e6f61e76238c3428f20c1aa 820 Pfam PF08482 ATP-dependent helicase C-terminal 673 805 1.8E-52 T 28-03-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AL549_RS18805 d69c835b6e6f61e76238c3428f20c1aa 820 SMART SM00847 387 476 1.4E-7 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 AL549_RS18805 d69c835b6e6f61e76238c3428f20c1aa 820 Pfam PF04408 Helicase associated domain (HA2) 388 451 8.9E-7 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 AL549_RS18805 d69c835b6e6f61e76238c3428f20c1aa 820 Gene3D G3DSA:3.40.50.300 3 162 5.0E-22 T 28-03-2018 AL549_RS18805 d69c835b6e6f61e76238c3428f20c1aa 820 Gene3D G3DSA:3.40.50.300 180 347 5.6E-46 T 28-03-2018 AL549_RS18805 d69c835b6e6f61e76238c3428f20c1aa 820 Pfam PF00270 DEAD/DEAH box helicase 14 163 8.9E-9 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL549_RS09310 c3a6205969fff1da6bb9a1249657bfe3 135 SUPERFAMILY SSF54631 7 126 7.71E-25 T 28-03-2018 AL549_RS09310 c3a6205969fff1da6bb9a1249657bfe3 135 Gene3D G3DSA:3.10.580.10 1 133 3.0E-22 T 28-03-2018 AL549_RS09310 c3a6205969fff1da6bb9a1249657bfe3 135 Pfam PF00571 CBS domain 78 125 3.8E-10 T 28-03-2018 IPR000644 CBS domain AL549_RS09310 c3a6205969fff1da6bb9a1249657bfe3 135 SMART SM00116 83 130 3.5E-7 T 28-03-2018 IPR000644 CBS domain AL549_RS09310 c3a6205969fff1da6bb9a1249657bfe3 135 SMART SM00116 16 65 4.4 T 28-03-2018 IPR000644 CBS domain AL549_RS09605 2ef1f61a1a39867d51883bf274e6000b 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 5.3E-23 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL549_RS09605 2ef1f61a1a39867d51883bf274e6000b 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 18.817 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL549_RS09605 2ef1f61a1a39867d51883bf274e6000b 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 7.4E-34 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL549_RS09605 2ef1f61a1a39867d51883bf274e6000b 87 SUPERFAMILY SSF55229 33 86 1.57E-16 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL549_RS09605 2ef1f61a1a39867d51883bf274e6000b 87 Gene3D G3DSA:3.30.1070.10 1 84 1.3E-27 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL549_RS03000 8e8aff10379806885e3c3e1426a66d20 318 Gene3D G3DSA:1.10.10.10 1 91 7.9E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03000 8e8aff10379806885e3c3e1426a66d20 318 SUPERFAMILY SSF46785 6 84 1.84E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03000 8e8aff10379806885e3c3e1426a66d20 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.2E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03000 8e8aff10379806885e3c3e1426a66d20 318 Gene3D G3DSA:3.40.190.10 92 237 2.1E-10 T 28-03-2018 AL549_RS03000 8e8aff10379806885e3c3e1426a66d20 318 Pfam PF03466 LysR substrate binding domain 96 274 1.0E-7 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS03000 8e8aff10379806885e3c3e1426a66d20 318 SUPERFAMILY SSF53850 91 251 6.38E-17 T 28-03-2018 AL549_RS17780 404e0f30c674fb984a49074da045fc65 262 Gene3D G3DSA:2.160.10.10 1 196 3.9E-48 T 28-03-2018 AL549_RS17780 404e0f30c674fb984a49074da045fc65 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL549_RS17780 404e0f30c674fb984a49074da045fc65 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 1.6E-8 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS17780 404e0f30c674fb984a49074da045fc65 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 6 32 4.5E-6 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS17780 404e0f30c674fb984a49074da045fc65 262 SUPERFAMILY SSF51161 1 262 2.72E-84 T 28-03-2018 IPR011004 Trimeric LpxA-like AL549_RS17780 404e0f30c674fb984a49074da045fc65 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.3E-111 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AL549_RS17780 404e0f30c674fb984a49074da045fc65 262 Gene3D G3DSA:1.20.1180.10 197 262 7.5E-26 T 28-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AL549_RS17780 404e0f30c674fb984a49074da045fc65 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 5.9E-31 T 28-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AL549_RS17780 404e0f30c674fb984a49074da045fc65 262 PIRSF PIRSF000456 4 262 2.1E-110 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AL549_RS17780 404e0f30c674fb984a49074da045fc65 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 48.29 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AL549_RS00415 5a9688e00d5ffe238dac297fcea22747 717 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 10 698 2.4E-261 T 28-03-2018 IPR017750 ATPase, type I secretion system AL549_RS00415 5a9688e00d5ffe238dac297fcea22747 717 Gene3D G3DSA:3.90.70.10 5 128 1.4E-7 T 28-03-2018 AL549_RS00415 5a9688e00d5ffe238dac297fcea22747 717 SUPERFAMILY SSF90123 142 455 1.44E-47 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS00415 5a9688e00d5ffe238dac297fcea22747 717 Gene3D G3DSA:1.20.1560.10 138 455 1.5E-31 T 28-03-2018 AL549_RS00415 5a9688e00d5ffe238dac297fcea22747 717 ProSitePatterns PS00211 ABC transporters family signature. 609 623 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS00415 5a9688e00d5ffe238dac297fcea22747 717 Pfam PF00005 ABC transporter 488 637 3.2E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS00415 5a9688e00d5ffe238dac297fcea22747 717 Pfam PF00664 ABC transporter transmembrane region 161 419 1.6E-18 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS00415 5a9688e00d5ffe238dac297fcea22747 717 SUPERFAMILY SSF52540 464 698 8.99E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS00415 5a9688e00d5ffe238dac297fcea22747 717 Gene3D G3DSA:3.40.50.300 456 710 1.5E-63 T 28-03-2018 AL549_RS00415 5a9688e00d5ffe238dac297fcea22747 717 SMART SM00382 497 682 1.0E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS15680 f2b13afb56b83c6e9cad1e34cd9c6a4e 462 PRINTS PR00811 Bacterial general secretion pathway protein D signature 403 417 4.7E-9 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS15680 f2b13afb56b83c6e9cad1e34cd9c6a4e 462 PRINTS PR00811 Bacterial general secretion pathway protein D signature 252 276 4.7E-9 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS15680 f2b13afb56b83c6e9cad1e34cd9c6a4e 462 PRINTS PR00811 Bacterial general secretion pathway protein D signature 380 398 4.7E-9 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS15680 f2b13afb56b83c6e9cad1e34cd9c6a4e 462 Pfam PF00263 Bacterial type II and III secretion system protein 256 415 8.9E-40 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 AL549_RS15680 f2b13afb56b83c6e9cad1e34cd9c6a4e 462 Pfam PF13629 Pilus formation protein N terminal region 23 92 3.3E-18 T 28-03-2018 IPR032789 Pilus formation protein, N-terminal AL549_RS09430 72e7664eb8b04bb0b3a8493d46a2852e 549 Gene3D G3DSA:3.30.310.50 445 547 4.1E-21 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS09430 72e7664eb8b04bb0b3a8493d46a2852e 549 SUPERFAMILY SSF53738 26 235 3.06E-52 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS09430 72e7664eb8b04bb0b3a8493d46a2852e 549 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 178 2.8E-38 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS09430 72e7664eb8b04bb0b3a8493d46a2852e 549 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS09430 72e7664eb8b04bb0b3a8493d46a2852e 549 Gene3D G3DSA:3.40.120.10 214 332 4.5E-22 T 28-03-2018 AL549_RS09430 72e7664eb8b04bb0b3a8493d46a2852e 549 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 321 439 1.1E-28 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS09430 72e7664eb8b04bb0b3a8493d46a2852e 549 Gene3D G3DSA:3.40.120.10 12 213 2.1E-47 T 28-03-2018 AL549_RS09430 72e7664eb8b04bb0b3a8493d46a2852e 549 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 315 8.0E-17 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS09430 72e7664eb8b04bb0b3a8493d46a2852e 549 SUPERFAMILY SSF55957 433 544 2.17E-19 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS09430 72e7664eb8b04bb0b3a8493d46a2852e 549 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 486 538 3.9E-8 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS09430 72e7664eb8b04bb0b3a8493d46a2852e 549 SUPERFAMILY SSF53738 209 315 4.47E-7 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS09430 72e7664eb8b04bb0b3a8493d46a2852e 549 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 28-03-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 AL549_RS09430 72e7664eb8b04bb0b3a8493d46a2852e 549 SUPERFAMILY SSF53738 305 448 5.49E-33 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL549_RS09430 72e7664eb8b04bb0b3a8493d46a2852e 549 Gene3D G3DSA:3.40.120.10 333 444 4.4E-27 T 28-03-2018 AL549_RS17840 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.1E-37 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS17840 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.1E-37 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS17840 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.1E-37 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS17840 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.1E-37 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS17840 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.1E-37 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS17840 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.1E-37 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS17840 41e705eebc3ea5b113708b0bf32bacd6 242 Gene3D G3DSA:3.40.50.10490 5 240 9.2E-94 T 28-03-2018 AL549_RS17840 41e705eebc3ea5b113708b0bf32bacd6 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 28-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AL549_RS17840 41e705eebc3ea5b113708b0bf32bacd6 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 40.85 T 28-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS17840 41e705eebc3ea5b113708b0bf32bacd6 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 28-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AL549_RS17840 41e705eebc3ea5b113708b0bf32bacd6 242 SUPERFAMILY SSF52313 6 232 3.92E-95 T 28-03-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain AL549_RS17840 41e705eebc3ea5b113708b0bf32bacd6 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 3.9E-106 T 28-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS17840 41e705eebc3ea5b113708b0bf32bacd6 242 Pfam PF00318 Ribosomal protein S2 9 224 6.1E-93 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS14375 39c22b431835e580810d40ca9741f863 257 Gene3D G3DSA:3.30.65.10 200 257 6.1E-13 T 28-03-2018 AL549_RS14375 39c22b431835e580810d40ca9741f863 257 Pfam PF08378 Nuclease-related domain 33 143 6.3E-31 T 28-03-2018 IPR011528 Nuclease-related domain, NERD AL549_RS14375 39c22b431835e580810d40ca9741f863 257 SUPERFAMILY SSF57783 218 254 8.5E-7 T 28-03-2018 AL549_RS14375 39c22b431835e580810d40ca9741f863 257 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 217 256 2.0E-11 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL549_RS03630 ca2eed1c0430e81d9e704e6bcf03b770 1485 Gene3D G3DSA:3.40.50.980 894 1032 1.3E-26 T 28-03-2018 AL549_RS03630 ca2eed1c0430e81d9e704e6bcf03b770 1485 SUPERFAMILY SSF52777 635 869 1.33E-22 T 28-03-2018 AL549_RS03630 ca2eed1c0430e81d9e704e6bcf03b770 1485 SUPERFAMILY SSF52777 4 180 3.67E-20 T 28-03-2018 AL549_RS03630 ca2eed1c0430e81d9e704e6bcf03b770 1485 Gene3D G3DSA:3.40.50.980 1033 1208 6.8E-47 T 28-03-2018 AL549_RS03630 ca2eed1c0430e81d9e704e6bcf03b770 1485 Gene3D G3DSA:3.30.300.30 1294 1399 1.4E-24 T 28-03-2018 AL549_RS03630 ca2eed1c0430e81d9e704e6bcf03b770 1485 Gene3D G3DSA:2.30.38.10 1209 1287 1.1E-16 T 28-03-2018 AL549_RS03630 ca2eed1c0430e81d9e704e6bcf03b770 1485 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1040 1051 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL549_RS03630 ca2eed1c0430e81d9e704e6bcf03b770 1485 Pfam PF13193 AMP-binding enzyme C-terminal domain 1306 1380 3.3E-5 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL549_RS03630 ca2eed1c0430e81d9e704e6bcf03b770 1485 Pfam PF00501 AMP-binding enzyme 906 1297 4.4E-79 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL549_RS03630 ca2eed1c0430e81d9e704e6bcf03b770 1485 Gene3D G3DSA:3.30.559.10 4 200 8.2E-17 T 28-03-2018 AL549_RS03630 ca2eed1c0430e81d9e704e6bcf03b770 1485 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 922 1321 1.6E-106 T 28-03-2018 IPR010071 Amino acid adenylation domain AL549_RS03630 ca2eed1c0430e81d9e704e6bcf03b770 1485 Pfam PF00668 Condensation domain 4 439 4.9E-31 T 28-03-2018 IPR001242 Condensation domain AL549_RS03630 ca2eed1c0430e81d9e704e6bcf03b770 1485 Pfam PF00668 Condensation domain 483 865 8.6E-14 T 28-03-2018 IPR001242 Condensation domain AL549_RS03630 ca2eed1c0430e81d9e704e6bcf03b770 1485 SUPERFAMILY SSF52777 187 439 2.33E-33 T 28-03-2018 AL549_RS03630 ca2eed1c0430e81d9e704e6bcf03b770 1485 Gene3D G3DSA:3.30.559.10 404 644 6.7E-10 T 28-03-2018 AL549_RS03630 ca2eed1c0430e81d9e704e6bcf03b770 1485 SUPERFAMILY SSF56801 877 1392 3.66E-124 T 28-03-2018 AL549_RS03630 ca2eed1c0430e81d9e704e6bcf03b770 1485 SUPERFAMILY SSF52777 458 644 3.11E-10 T 28-03-2018 AL549_RS20040 302fc6bbfab974dd8fb40eabeeabc2b5 464 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 3.6E-37 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AL549_RS20040 302fc6bbfab974dd8fb40eabeeabc2b5 464 Pfam PF03796 DnaB-like helicase C terminal domain 199 455 2.0E-112 T 28-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AL549_RS20040 302fc6bbfab974dd8fb40eabeeabc2b5 464 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 457 1.2E-176 T 28-03-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AL549_RS20040 302fc6bbfab974dd8fb40eabeeabc2b5 464 SUPERFAMILY SSF48024 18 129 6.02E-39 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AL549_RS20040 302fc6bbfab974dd8fb40eabeeabc2b5 464 Gene3D G3DSA:3.40.50.300 180 463 2.3E-65 T 28-03-2018 AL549_RS20040 302fc6bbfab974dd8fb40eabeeabc2b5 464 Gene3D G3DSA:1.10.860.10 10 162 2.5E-47 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AL549_RS20040 302fc6bbfab974dd8fb40eabeeabc2b5 464 SUPERFAMILY SSF52540 197 268 1.24E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20040 302fc6bbfab974dd8fb40eabeeabc2b5 464 SUPERFAMILY SSF52540 295 448 1.24E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11145 4124d1305f17c9733b9482d8ec1afbb8 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 37.654 T 28-03-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 AL549_RS11145 4124d1305f17c9733b9482d8ec1afbb8 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 1.3E-31 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AL549_RS11145 4124d1305f17c9733b9482d8ec1afbb8 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.57 T 28-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AL549_RS11145 4124d1305f17c9733b9482d8ec1afbb8 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 5.6E-18 T 28-03-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AL549_RS11145 4124d1305f17c9733b9482d8ec1afbb8 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 1.5E-31 T 28-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AL549_RS11145 4124d1305f17c9733b9482d8ec1afbb8 211 SUPERFAMILY SSF141734 14 124 1.57E-45 T 28-03-2018 AL549_RS11145 4124d1305f17c9733b9482d8ec1afbb8 211 SUPERFAMILY SSF101386 123 211 7.1E-25 T 28-03-2018 AL549_RS11145 4124d1305f17c9733b9482d8ec1afbb8 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 2.0E-23 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AL549_RS11145 4124d1305f17c9733b9482d8ec1afbb8 211 Gene3D G3DSA:1.10.287.1080 119 211 4.3E-21 T 28-03-2018 AL549_RS16935 ab3db231a7e1226799a33dfe01fed4d8 328 Pfam PF08448 PAS fold 28 141 2.9E-7 T 28-03-2018 IPR013656 PAS fold-4 AL549_RS16935 ab3db231a7e1226799a33dfe01fed4d8 328 SMART SM00267 149 326 7.4E-46 T 28-03-2018 IPR000160 GGDEF domain AL549_RS16935 ab3db231a7e1226799a33dfe01fed4d8 328 Gene3D G3DSA:3.30.70.270 152 327 2.5E-43 T 28-03-2018 AL549_RS16935 ab3db231a7e1226799a33dfe01fed4d8 328 Gene3D G3DSA:3.30.450.20 24 151 1.7E-13 T 28-03-2018 AL549_RS16935 ab3db231a7e1226799a33dfe01fed4d8 328 SUPERFAMILY SSF55785 23 103 2.66E-7 T 28-03-2018 IPR000014 PAS domain AL549_RS16935 ab3db231a7e1226799a33dfe01fed4d8 328 SUPERFAMILY SSF55073 165 326 5.81E-40 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS16935 ab3db231a7e1226799a33dfe01fed4d8 328 Pfam PF00990 Diguanylate cyclase, GGDEF domain 162 321 3.8E-41 T 28-03-2018 IPR000160 GGDEF domain AL549_RS16935 ab3db231a7e1226799a33dfe01fed4d8 328 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 156 324 3.1E-38 T 28-03-2018 IPR000160 GGDEF domain AL549_RS10600 af2fecaa5d6299beb7edc4dee2ab4fbc 195 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 43 189 6.6E-66 T 28-03-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 AL549_RS10600 af2fecaa5d6299beb7edc4dee2ab4fbc 195 Gene3D G3DSA:1.10.3820.10 131 195 1.1E-9 T 28-03-2018 AL549_RS10600 af2fecaa5d6299beb7edc4dee2ab4fbc 195 Gene3D G3DSA:3.90.10.10 29 106 2.6E-6 T 28-03-2018 AL549_RS10600 af2fecaa5d6299beb7edc4dee2ab4fbc 195 Gene3D G3DSA:3.90.10.10 107 130 0.007 T 28-03-2018 AL549_RS10600 af2fecaa5d6299beb7edc4dee2ab4fbc 195 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 152 188 3.6E-5 T 28-03-2018 IPR010177 Doubled CXXCH motif AL549_RS10600 af2fecaa5d6299beb7edc4dee2ab4fbc 195 Pfam PF13435 Cytochrome c554 and c-prime 35 88 9.3E-4 T 28-03-2018 IPR023155 Cytochrome c-552/4 AL549_RS10600 af2fecaa5d6299beb7edc4dee2ab4fbc 195 SUPERFAMILY SSF48695 14 193 1.13E-27 T 28-03-2018 IPR011031 Multihaem cytochrome AL549_RS11785 ee3c6bb42abbbb0e5a8aecabf9ea4e0f 634 Gene3D G3DSA:3.60.21.10 18 343 1.3E-67 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS11785 ee3c6bb42abbbb0e5a8aecabf9ea4e0f 634 Pfam PF02872 5'-nucleotidase, C-terminal domain 342 492 1.3E-21 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS11785 ee3c6bb42abbbb0e5a8aecabf9ea4e0f 634 ProSitePatterns PS00786 5'-nucleotidase signature 2. 107 118 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS11785 ee3c6bb42abbbb0e5a8aecabf9ea4e0f 634 PRINTS PR01607 Apyrase family signature 230 253 3.9E-13 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS11785 ee3c6bb42abbbb0e5a8aecabf9ea4e0f 634 PRINTS PR01607 Apyrase family signature 257 277 3.9E-13 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS11785 ee3c6bb42abbbb0e5a8aecabf9ea4e0f 634 PRINTS PR01607 Apyrase family signature 203 220 3.9E-13 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS11785 ee3c6bb42abbbb0e5a8aecabf9ea4e0f 634 PRINTS PR01607 Apyrase family signature 26 44 3.9E-13 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS11785 ee3c6bb42abbbb0e5a8aecabf9ea4e0f 634 Pfam PF00149 Calcineurin-like phosphoesterase 29 247 1.9E-14 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL549_RS11785 ee3c6bb42abbbb0e5a8aecabf9ea4e0f 634 SUPERFAMILY SSF55816 339 547 9.29E-25 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS11785 ee3c6bb42abbbb0e5a8aecabf9ea4e0f 634 Gene3D G3DSA:3.90.780.10 344 557 4.3E-31 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS11785 ee3c6bb42abbbb0e5a8aecabf9ea4e0f 634 SUPERFAMILY SSF56300 19 327 1.14E-75 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS09660 0d11806ce40e3baa48a6d701a9d7bf9a 409 Gene3D G3DSA:3.40.47.10 5 260 1.6E-53 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS09660 0d11806ce40e3baa48a6d701a9d7bf9a 409 SUPERFAMILY SSF53901 216 406 1.7E-59 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS09660 0d11806ce40e3baa48a6d701a9d7bf9a 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 363 6.8E-28 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL549_RS09660 0d11806ce40e3baa48a6d701a9d7bf9a 409 Gene3D G3DSA:3.40.47.10 261 407 1.3E-36 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS09660 0d11806ce40e3baa48a6d701a9d7bf9a 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 1.2E-39 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL549_RS09660 0d11806ce40e3baa48a6d701a9d7bf9a 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site AL549_RS09660 0d11806ce40e3baa48a6d701a9d7bf9a 409 SMART SM00825 Beta-ketoacyl synthase 5 409 1.8E-10 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL549_RS09660 0d11806ce40e3baa48a6d701a9d7bf9a 409 SUPERFAMILY SSF53901 2 252 1.56E-53 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 SUPERFAMILY SSF52540 4 164 1.31E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 Pfam PF01926 50S ribosome-binding GTPase 210 327 1.3E-24 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.1E-27 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 Gene3D G3DSA:1.20.120.430 2 66 1.4E-14 T 28-03-2018 AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 Gene3D G3DSA:1.20.120.430 67 254 2.0E-40 T 28-03-2018 AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 Gene3D G3DSA:3.40.50.300 255 381 1.2E-23 T 28-03-2018 AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 PIRSF PIRSF006485 1 471 2.1E-179 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 463 1.4E-179 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 6.8E-11 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.8E-11 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 SMART SM00382 1 173 1.3 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 SMART SM00382 206 353 0.12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 1.4E-20 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 206 372 1.5E-25 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 Hamap MF_00195 GTPase Der [der]. 2 466 39.122 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 383 462 1.3E-26 T 28-03-2018 IPR032859 GTPase Der, C-terminal KH-domain-like AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 SUPERFAMILY SSF52540 194 469 3.6E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 Gene3D G3DSA:3.30.300.20 382 464 4.1E-28 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL549_RS08305 95b1841e23b7dd98b92697b31ff55580 496 SMART SM00173 209 380 0.0091 T 28-03-2018 AL549_RS22375 e42f540e0500fd47233ed380db30f556 224 Gene3D G3DSA:3.40.50.150 124 213 3.8E-7 T 28-03-2018 AL549_RS22375 e42f540e0500fd47233ed380db30f556 224 Pfam PF13489 Methyltransferase domain 73 204 7.3E-17 T 28-03-2018 AL549_RS22375 e42f540e0500fd47233ed380db30f556 224 SUPERFAMILY SSF53335 59 210 3.2E-17 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS22375 e42f540e0500fd47233ed380db30f556 224 Gene3D G3DSA:3.40.50.150 12 118 2.9E-7 T 28-03-2018 AL549_RS10755 b5c5ecda42212e5ec7c84a6fe3319447 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 1.4E-74 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL549_RS10755 b5c5ecda42212e5ec7c84a6fe3319447 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 377 458 2.6E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL549_RS10755 b5c5ecda42212e5ec7c84a6fe3319447 476 Gene3D G3DSA:3.30.1360.60 397 472 3.1E-25 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL549_RS10755 b5c5ecda42212e5ec7c84a6fe3319447 476 SUPERFAMILY SSF55604 399 472 8.37E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL549_RS10755 b5c5ecda42212e5ec7c84a6fe3319447 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL549_RS10755 b5c5ecda42212e5ec7c84a6fe3319447 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 7.3E-12 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL549_RS10755 b5c5ecda42212e5ec7c84a6fe3319447 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 3.6E-197 T 28-03-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 AL549_RS00365 f85756fb69005a537b2bbee8e6e8e554 91 SUPERFAMILY SSF55729 3 89 5.32E-25 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS00365 f85756fb69005a537b2bbee8e6e8e554 91 Gene3D G3DSA:3.40.630.30 1 91 2.1E-17 T 28-03-2018 AL549_RS00365 f85756fb69005a537b2bbee8e6e8e554 91 Pfam PF14542 GCN5-related N-acetyl-transferase 13 89 8.0E-23 T 28-03-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AL549_RS07090 f5b8c8d3cba68da648cb9c98da5e8210 300 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 88 271 5.9E-34 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS07090 f5b8c8d3cba68da648cb9c98da5e8210 300 SUPERFAMILY SSF58104 42 296 6.15E-46 T 28-03-2018 AL549_RS07090 f5b8c8d3cba68da648cb9c98da5e8210 300 Gene3D G3DSA:1.10.287.950 74 296 7.7E-37 T 28-03-2018 AL549_RS07090 f5b8c8d3cba68da648cb9c98da5e8210 300 SMART SM00283 53 300 6.2E-21 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS21835 835f58a5d222325893b5d904a80af08d 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 28-03-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21835 835f58a5d222325893b5d904a80af08d 288 Gene3D G3DSA:1.10.287.80 2 41 1.6E-18 T 28-03-2018 AL549_RS21835 835f58a5d222325893b5d904a80af08d 288 Gene3D G3DSA:1.10.287.80 241 283 1.8E-14 T 28-03-2018 AL549_RS21835 835f58a5d222325893b5d904a80af08d 288 Gene3D G3DSA:3.40.1380.10 42 240 1.1E-75 T 28-03-2018 AL549_RS21835 835f58a5d222325893b5d904a80af08d 288 Pfam PF00231 ATP synthase 5 287 5.7E-99 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21835 835f58a5d222325893b5d904a80af08d 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 5.5E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21835 835f58a5d222325893b5d904a80af08d 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 5.5E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21835 835f58a5d222325893b5d904a80af08d 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 5.5E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21835 835f58a5d222325893b5d904a80af08d 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 5.5E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21835 835f58a5d222325893b5d904a80af08d 288 SUPERFAMILY SSF52943 2 288 1.47E-96 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21835 835f58a5d222325893b5d904a80af08d 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 1.9E-112 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21835 835f58a5d222325893b5d904a80af08d 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.971 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS16270 c6f4a223960ec9a9013d6b6d49d044e1 768 Pfam PF11842 Domain of unknown function (DUF3362) 585 728 1.9E-42 T 28-03-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal AL549_RS16270 c6f4a223960ec9a9013d6b6d49d044e1 768 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AL549_RS16270 c6f4a223960ec9a9013d6b6d49d044e1 768 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 9.4E-263 T 28-03-2018 IPR022946 Uncharacterised protein family UPF0313 AL549_RS16270 c6f4a223960ec9a9013d6b6d49d044e1 768 Pfam PF08497 Radical SAM N-terminal 24 370 1.8E-143 T 28-03-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal AL549_RS16270 c6f4a223960ec9a9013d6b6d49d044e1 768 Gene3D G3DSA:3.40.50.280 135 218 0.12 T 28-03-2018 AL549_RS16270 c6f4a223960ec9a9013d6b6d49d044e1 768 Pfam PF04055 Radical SAM superfamily 371 576 3.9E-20 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS16270 c6f4a223960ec9a9013d6b6d49d044e1 768 SMART SM00729 367 617 9.5E-5 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL549_RS16270 c6f4a223960ec9a9013d6b6d49d044e1 768 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 638 49.169 T 28-03-2018 IPR022946 Uncharacterised protein family UPF0313 AL549_RS16270 c6f4a223960ec9a9013d6b6d49d044e1 768 SUPERFAMILY SSF102114 370 431 2.22E-11 T 28-03-2018 AL549_RS16270 c6f4a223960ec9a9013d6b6d49d044e1 768 SUPERFAMILY SSF102114 461 605 2.22E-11 T 28-03-2018 AL549_RS16270 c6f4a223960ec9a9013d6b6d49d044e1 768 Gene3D G3DSA:3.20.20.70 277 726 4.1E-30 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS06055 7f53b0787b65871c0069f98029934b5b 270 Gene3D G3DSA:3.40.190.10 134 270 1.4E-4 T 28-03-2018 AL549_RS06055 7f53b0787b65871c0069f98029934b5b 270 Gene3D G3DSA:3.40.190.10 22 133 4.9E-11 T 28-03-2018 AL549_RS06055 7f53b0787b65871c0069f98029934b5b 270 SUPERFAMILY SSF53850 31 269 2.86E-25 T 28-03-2018 AL549_RS06055 7f53b0787b65871c0069f98029934b5b 270 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 268 5.7E-16 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS13490 052bfcacfaef81c2ec43c22caf1d3987 50 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 3.5E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS22805 e7e7fdff32c0eba2a2da7aad0f374d74 396 Gene3D G3DSA:3.40.50.720 30 380 8.7E-36 T 28-03-2018 AL549_RS22805 e7e7fdff32c0eba2a2da7aad0f374d74 396 Pfam PF02719 Polysaccharide biosynthesis protein 36 278 3.3E-45 T 28-03-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AL549_RS22805 e7e7fdff32c0eba2a2da7aad0f374d74 396 SUPERFAMILY SSF51735 34 288 4.84E-28 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS21990 91494af51f811d97cc06b1c6bdbd70c3 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 37.285 T 28-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AL549_RS21990 91494af51f811d97cc06b1c6bdbd70c3 377 Gene3D G3DSA:3.30.1490.20 83 178 5.8E-14 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL549_RS21990 91494af51f811d97cc06b1c6bdbd70c3 377 SUPERFAMILY SSF51246 299 373 1.33E-18 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL549_RS21990 91494af51f811d97cc06b1c6bdbd70c3 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 1.3E-104 T 28-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AL549_RS21990 91494af51f811d97cc06b1c6bdbd70c3 377 SUPERFAMILY SSF56059 92 295 2.83E-57 T 28-03-2018 AL549_RS21990 91494af51f811d97cc06b1c6bdbd70c3 377 Pfam PF02222 ATP-grasp domain 101 274 8.3E-52 T 28-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AL549_RS21990 91494af51f811d97cc06b1c6bdbd70c3 377 SUPERFAMILY SSF52440 1 88 5.04E-16 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AL549_RS21990 91494af51f811d97cc06b1c6bdbd70c3 377 Gene3D G3DSA:3.30.470.20 179 362 1.6E-32 T 28-03-2018 AL549_RS21990 91494af51f811d97cc06b1c6bdbd70c3 377 Gene3D G3DSA:3.40.50.20 1 81 1.8E-16 T 28-03-2018 AL549_RS17135 5f3807eb15afe39dbe7e08bb2d91a1aa 200 SUPERFAMILY SSF111304 2 199 8.24E-72 T 28-03-2018 IPR023627 Recombination protein RecR AL549_RS17135 5f3807eb15afe39dbe7e08bb2d91a1aa 200 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.122 T 28-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AL549_RS17135 5f3807eb15afe39dbe7e08bb2d91a1aa 200 SMART SM00493 81 166 2.6E-16 T 28-03-2018 IPR006171 TOPRIM domain AL549_RS17135 5f3807eb15afe39dbe7e08bb2d91a1aa 200 Pfam PF13662 Toprim domain 83 172 1.5E-22 T 28-03-2018 IPR006171 TOPRIM domain AL549_RS17135 5f3807eb15afe39dbe7e08bb2d91a1aa 200 Pfam PF02132 RecR protein 41 77 3.1E-15 T 28-03-2018 IPR023628 Recombination protein RecR, C4-type zinc finger AL549_RS17135 5f3807eb15afe39dbe7e08bb2d91a1aa 200 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 28-03-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 AL549_RS17135 5f3807eb15afe39dbe7e08bb2d91a1aa 200 Gene3D G3DSA:3.40.1360.10 78 171 1.3E-33 T 28-03-2018 AL549_RS17135 5f3807eb15afe39dbe7e08bb2d91a1aa 200 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 1.5E-77 T 28-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AL549_RS13800 4d2025a52cbdb85bbcab0895a815e0a1 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 6.7E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS15855 98f5fc55ffb4323add4521a145f2a923 591 SUPERFAMILY SSF90123 2 321 5.89E-73 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS15855 98f5fc55ffb4323add4521a145f2a923 591 SMART SM00382 361 546 1.8E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS15855 98f5fc55ffb4323add4521a145f2a923 591 Gene3D G3DSA:1.20.1560.10 1 321 2.4E-66 T 28-03-2018 AL549_RS15855 98f5fc55ffb4323add4521a145f2a923 591 SUPERFAMILY SSF52540 330 570 6.97E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS15855 98f5fc55ffb4323add4521a145f2a923 591 Pfam PF00664 ABC transporter transmembrane region 21 287 2.9E-44 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS15855 98f5fc55ffb4323add4521a145f2a923 591 Gene3D G3DSA:3.40.50.300 322 576 7.3E-70 T 28-03-2018 AL549_RS15855 98f5fc55ffb4323add4521a145f2a923 591 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS15855 98f5fc55ffb4323add4521a145f2a923 591 Pfam PF00005 ABC transporter 352 500 3.2E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS03410 76066d6144c273e83ca826d82d9a06da 274 SUPERFAMILY SSF46894 206 268 1.19E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS03410 76066d6144c273e83ca826d82d9a06da 274 Gene3D G3DSA:1.10.1270.10 99 201 0.3 T 28-03-2018 AL549_RS03410 76066d6144c273e83ca826d82d9a06da 274 Pfam PF00196 Bacterial regulatory proteins, luxR family 210 264 3.8E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS03410 76066d6144c273e83ca826d82d9a06da 274 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 241 253 6.9E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS03410 76066d6144c273e83ca826d82d9a06da 274 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 211 225 6.9E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS03410 76066d6144c273e83ca826d82d9a06da 274 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 225 241 6.9E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS03410 76066d6144c273e83ca826d82d9a06da 274 Gene3D G3DSA:1.10.10.10 207 270 5.9E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03410 76066d6144c273e83ca826d82d9a06da 274 SMART SM00421 208 265 3.6E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS20260 6a68d6b2e7b35c8c36e378d7548e0643 115 Gene3D G3DSA:3.30.429.10 1 115 3.5E-31 T 28-03-2018 AL549_RS20260 6a68d6b2e7b35c8c36e378d7548e0643 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 90 1.8E-6 T 28-03-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 AL549_RS20260 6a68d6b2e7b35c8c36e378d7548e0643 115 SUPERFAMILY SSF55331 2 115 2.0E-36 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily AL549_RS11895 bf5a7f76329b952d23183d041b1640c2 386 Pfam PF01966 HD domain 189 324 2.8E-16 T 28-03-2018 IPR006674 HD domain AL549_RS11895 bf5a7f76329b952d23183d041b1640c2 386 SMART SM00471 183 334 1.4E-10 T 28-03-2018 IPR003607 HD/PDEase domain AL549_RS11895 bf5a7f76329b952d23183d041b1640c2 386 SUPERFAMILY SSF109604 178 365 3.14E-32 T 28-03-2018 AL549_RS11895 bf5a7f76329b952d23183d041b1640c2 386 Gene3D G3DSA:1.10.3210.10 83 374 2.1E-40 T 28-03-2018 AL549_RS11965 b8e9fb703582ed1cd8171ada0fb80013 231 Pfam PF07729 FCD domain 92 217 1.6E-24 T 28-03-2018 IPR011711 GntR, C-terminal AL549_RS11965 b8e9fb703582ed1cd8171ada0fb80013 231 Gene3D G3DSA:1.20.120.530 85 231 5.6E-31 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL549_RS11965 b8e9fb703582ed1cd8171ada0fb80013 231 SUPERFAMILY SSF48008 88 225 2.2E-23 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL549_RS11965 b8e9fb703582ed1cd8171ada0fb80013 231 SUPERFAMILY SSF46785 17 109 1.9E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS11965 b8e9fb703582ed1cd8171ada0fb80013 231 Gene3D G3DSA:1.10.10.10 7 84 3.6E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS11965 b8e9fb703582ed1cd8171ada0fb80013 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 1.5E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS11965 b8e9fb703582ed1cd8171ada0fb80013 231 SMART SM00345 24 82 2.3E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS11965 b8e9fb703582ed1cd8171ada0fb80013 231 SMART SM00895 92 219 8.8E-21 T 28-03-2018 IPR011711 GntR, C-terminal AL549_RS23235 4620ebc6b5a5872619646f6a3aaac60a 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 28-03-2018 AL549_RS23235 4620ebc6b5a5872619646f6a3aaac60a 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 28-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS23235 4620ebc6b5a5872619646f6a3aaac60a 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 1.2E-111 T 28-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS23235 4620ebc6b5a5872619646f6a3aaac60a 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 28-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS23235 4620ebc6b5a5872619646f6a3aaac60a 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 4.3E-24 T 28-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS23235 4620ebc6b5a5872619646f6a3aaac60a 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.681 T 28-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS23235 4620ebc6b5a5872619646f6a3aaac60a 330 SMART SM00662 23 235 1.0E-103 T 28-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS23235 4620ebc6b5a5872619646f6a3aaac60a 330 Gene3D G3DSA:1.10.150.20 246 329 8.6E-29 T 28-03-2018 AL549_RS23235 4620ebc6b5a5872619646f6a3aaac60a 330 SUPERFAMILY SSF56553 53 179 1.73E-40 T 28-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS23235 4620ebc6b5a5872619646f6a3aaac60a 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 28-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS23235 4620ebc6b5a5872619646f6a3aaac60a 330 Gene3D G3DSA:3.30.1360.10 4 89 1.0E-19 T 28-03-2018 AL549_RS23235 4620ebc6b5a5872619646f6a3aaac60a 330 Gene3D G3DSA:3.30.1360.10 119 232 3.2E-27 T 28-03-2018 AL549_RS23235 4620ebc6b5a5872619646f6a3aaac60a 330 SUPERFAMILY SSF55257 7 53 3.53E-30 T 28-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS23235 4620ebc6b5a5872619646f6a3aaac60a 330 SUPERFAMILY SSF55257 180 234 3.53E-30 T 28-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS11640 4381aa4c36624f27178d16b9877f8cd0 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 28-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AL549_RS11640 4381aa4c36624f27178d16b9877f8cd0 562 SUPERFAMILY SSF51735 268 559 7.58E-95 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS11640 4381aa4c36624f27178d16b9877f8cd0 562 PIRSF PIRSF000106 2 560 8.8E-225 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL549_RS11640 4381aa4c36624f27178d16b9877f8cd0 562 PRINTS PR00072 Malic enzyme signature 144 173 5.3E-72 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL549_RS11640 4381aa4c36624f27178d16b9877f8cd0 562 PRINTS PR00072 Malic enzyme signature 180 202 5.3E-72 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL549_RS11640 4381aa4c36624f27178d16b9877f8cd0 562 PRINTS PR00072 Malic enzyme signature 295 311 5.3E-72 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL549_RS11640 4381aa4c36624f27178d16b9877f8cd0 562 PRINTS PR00072 Malic enzyme signature 239 257 5.3E-72 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL549_RS11640 4381aa4c36624f27178d16b9877f8cd0 562 PRINTS PR00072 Malic enzyme signature 84 108 5.3E-72 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL549_RS11640 4381aa4c36624f27178d16b9877f8cd0 562 PRINTS PR00072 Malic enzyme signature 264 280 5.3E-72 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL549_RS11640 4381aa4c36624f27178d16b9877f8cd0 562 PRINTS PR00072 Malic enzyme signature 405 421 5.3E-72 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL549_RS11640 4381aa4c36624f27178d16b9877f8cd0 562 Gene3D G3DSA:3.40.50.720 266 562 5.0E-107 T 28-03-2018 AL549_RS11640 4381aa4c36624f27178d16b9877f8cd0 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 73.362 T 28-03-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 AL549_RS11640 4381aa4c36624f27178d16b9877f8cd0 562 SMART SM00919 268 528 8.0E-131 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL549_RS11640 4381aa4c36624f27178d16b9877f8cd0 562 SUPERFAMILY SSF53223 4 267 1.01E-109 T 28-03-2018 AL549_RS11640 4381aa4c36624f27178d16b9877f8cd0 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 2.9E-78 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL549_RS11640 4381aa4c36624f27178d16b9877f8cd0 562 Gene3D G3DSA:3.40.50.10380 12 265 1.7E-113 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL549_RS11640 4381aa4c36624f27178d16b9877f8cd0 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 1.4E-102 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL549_RS11640 4381aa4c36624f27178d16b9877f8cd0 562 SMART SM01274 78 258 1.3E-107 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL549_RS15420 53489027a59f1bd2acb0522cdff85a10 323 SUPERFAMILY SSF81901 10 133 3.79E-18 T 28-03-2018 AL549_RS15420 53489027a59f1bd2acb0522cdff85a10 323 Pfam PF08238 Sel1 repeat 63 96 0.012 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS15420 53489027a59f1bd2acb0522cdff85a10 323 Pfam PF08238 Sel1 repeat 99 128 5.5 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS15420 53489027a59f1bd2acb0522cdff85a10 323 Pfam PF08238 Sel1 repeat 27 60 0.094 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS15420 53489027a59f1bd2acb0522cdff85a10 323 Gene3D G3DSA:1.10.287.110 226 323 4.0E-8 T 28-03-2018 IPR001623 DnaJ domain AL549_RS15420 53489027a59f1bd2acb0522cdff85a10 323 Gene3D G3DSA:2.60.40.1180 75 189 1.9E-12 T 28-03-2018 AL549_RS15420 53489027a59f1bd2acb0522cdff85a10 323 Gene3D G3DSA:2.60.40.1180 5 74 3.5E-10 T 28-03-2018 AL549_RS15420 53489027a59f1bd2acb0522cdff85a10 323 SMART SM00671 61 96 4.8E-4 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS15420 53489027a59f1bd2acb0522cdff85a10 323 SMART SM00671 26 60 11.0 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS15420 53489027a59f1bd2acb0522cdff85a10 323 SMART SM00671 97 132 110.0 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS15420 53489027a59f1bd2acb0522cdff85a10 323 SUPERFAMILY SSF46565 266 320 1.01E-11 T 28-03-2018 IPR001623 DnaJ domain AL549_RS09040 3d42eb638ac186fb1fb5f096168783ee 347 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL549_RS09040 3d42eb638ac186fb1fb5f096168783ee 347 Gene3D G3DSA:3.10.290.10 4 62 7.9E-20 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS09040 3d42eb638ac186fb1fb5f096168783ee 347 SUPERFAMILY SSF55174 8 61 1.18E-14 T 28-03-2018 AL549_RS09040 3d42eb638ac186fb1fb5f096168783ee 347 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 224 1.4E-47 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL549_RS09040 3d42eb638ac186fb1fb5f096168783ee 347 Gene3D G3DSA:3.30.70.580 63 146 8.8E-17 T 28-03-2018 AL549_RS09040 3d42eb638ac186fb1fb5f096168783ee 347 Gene3D G3DSA:3.30.70.1560 147 205 3.3E-25 T 28-03-2018 AL549_RS09040 3d42eb638ac186fb1fb5f096168783ee 347 Pfam PF01479 S4 domain 8 52 7.6E-11 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS09040 3d42eb638ac186fb1fb5f096168783ee 347 Pfam PF00849 RNA pseudouridylate synthase 67 193 5.2E-14 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS09040 3d42eb638ac186fb1fb5f096168783ee 347 SMART SM00363 7 65 2.6E-11 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS09040 3d42eb638ac186fb1fb5f096168783ee 347 SUPERFAMILY SSF55120 66 227 1.04E-38 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS23105 b67c847ad62a5c40d2c05037ccb34615 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.839 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23105 b67c847ad62a5c40d2c05037ccb34615 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23105 b67c847ad62a5c40d2c05037ccb34615 103 Gene3D G3DSA:3.30.70.600 3 102 3.3E-36 T 28-03-2018 IPR027486 Ribosomal protein S10 domain AL549_RS23105 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23105 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23105 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23105 b67c847ad62a5c40d2c05037ccb34615 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.8E-35 T 28-03-2018 IPR027486 Ribosomal protein S10 domain AL549_RS23105 b67c847ad62a5c40d2c05037ccb34615 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 28-03-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23105 b67c847ad62a5c40d2c05037ccb34615 103 SUPERFAMILY SSF54999 5 101 7.06E-37 T 28-03-2018 IPR027486 Ribosomal protein S10 domain AL549_RS23105 b67c847ad62a5c40d2c05037ccb34615 103 SMART SM01403 7 101 6.6E-56 T 28-03-2018 IPR027486 Ribosomal protein S10 domain AL549_RS14075 a7c4e1723869aa0fedb3ab17c2200ec8 99 PIRSF PIRSF029218 1 97 1.8E-31 T 28-03-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 AL549_RS14075 a7c4e1723869aa0fedb3ab17c2200ec8 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 92 2.8E-20 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL549_RS14075 a7c4e1723869aa0fedb3ab17c2200ec8 99 Gene3D G3DSA:3.30.2310.20 1 93 1.7E-5 T 28-03-2018 AL549_RS00615 978bf7c7136567558fedb5d97f4543cd 133 SUPERFAMILY SSF47175 28 124 3.41E-28 T 28-03-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AL549_RS00615 978bf7c7136567558fedb5d97f4543cd 133 Pfam PF07361 Cytochrome b562 28 124 7.1E-28 T 28-03-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 AL549_RS00615 978bf7c7136567558fedb5d97f4543cd 133 Gene3D G3DSA:1.20.120.10 28 122 1.2E-12 T 28-03-2018 AL549_RS07870 671319ff820140eec2995efba79e937f 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 5.6E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS07870 671319ff820140eec2995efba79e937f 296 SUPERFAMILY SSF53850 91 288 6.15E-24 T 28-03-2018 AL549_RS07870 671319ff820140eec2995efba79e937f 296 SUPERFAMILY SSF46785 2 85 1.27E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS07870 671319ff820140eec2995efba79e937f 296 Gene3D G3DSA:3.40.190.10 88 177 6.8E-4 T 28-03-2018 AL549_RS07870 671319ff820140eec2995efba79e937f 296 Gene3D G3DSA:3.40.190.10 178 259 8.6E-4 T 28-03-2018 AL549_RS07870 671319ff820140eec2995efba79e937f 296 Gene3D G3DSA:1.10.10.10 1 85 2.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS07870 671319ff820140eec2995efba79e937f 296 Pfam PF03466 LysR substrate binding domain 96 288 6.5E-12 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS07875 6d9e403619ad65700271f2e31beabc4a 98 SUPERFAMILY SSF46785 9 96 6.02E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS07875 6d9e403619ad65700271f2e31beabc4a 98 SMART SM00418 15 93 3.4E-30 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS07875 6d9e403619ad65700271f2e31beabc4a 98 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 8.4E-18 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS07875 6d9e403619ad65700271f2e31beabc4a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 7.1E-16 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS07875 6d9e403619ad65700271f2e31beabc4a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 7.1E-16 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS07875 6d9e403619ad65700271f2e31beabc4a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 7.1E-16 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS07875 6d9e403619ad65700271f2e31beabc4a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 7.1E-16 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS07875 6d9e403619ad65700271f2e31beabc4a 98 Gene3D G3DSA:1.10.10.10 1 90 1.6E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS22910 d950859adef1069b9b3f089fe902a3ea 313 Gene3D G3DSA:3.40.50.720 1 187 1.9E-19 T 28-03-2018 AL549_RS22910 d950859adef1069b9b3f089fe902a3ea 313 Gene3D G3DSA:3.90.25.10 188 292 2.6E-19 T 28-03-2018 AL549_RS22910 d950859adef1069b9b3f089fe902a3ea 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 46.179 T 28-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AL549_RS22910 d950859adef1069b9b3f089fe902a3ea 313 SUPERFAMILY SSF51735 1 308 5.0E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS22910 d950859adef1069b9b3f089fe902a3ea 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 309 4.0E-126 T 28-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AL549_RS22910 d950859adef1069b9b3f089fe902a3ea 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 1.8E-44 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL549_RS21740 97b18b5af67d9cb1cc955465a343877b 223 SUPERFAMILY SSF161098 13 203 1.7E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS21740 97b18b5af67d9cb1cc955465a343877b 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 7.6E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS21740 97b18b5af67d9cb1cc955465a343877b 223 Gene3D G3DSA:1.10.3720.10 2 222 1.3E-40 T 28-03-2018 AL549_RS21740 97b18b5af67d9cb1cc955465a343877b 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 1.1E-24 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL549_RS06645 c437979bad6bad4cb7d3d626af9e0268 215 Gene3D G3DSA:3.40.630.30 124 189 9.8E-10 T 28-03-2018 AL549_RS06645 c437979bad6bad4cb7d3d626af9e0268 215 SUPERFAMILY SSF55729 34 189 3.26E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS06645 c437979bad6bad4cb7d3d626af9e0268 215 Gene3D G3DSA:3.40.630.30 28 123 4.8E-9 T 28-03-2018 AL549_RS06645 c437979bad6bad4cb7d3d626af9e0268 215 Pfam PF00583 Acetyltransferase (GNAT) family 78 171 3.6E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS07535 122c0650105e1908724ca31f71e351eb 442 Gene3D G3DSA:3.90.190.20 305 438 3.2E-33 T 28-03-2018 AL549_RS07535 122c0650105e1908724ca31f71e351eb 442 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 377 2.1E-7 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL549_RS07535 122c0650105e1908724ca31f71e351eb 442 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 441 32.644 T 28-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS07535 122c0650105e1908724ca31f71e351eb 442 Gene3D G3DSA:3.40.1190.10 98 304 6.9E-55 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL549_RS07535 122c0650105e1908724ca31f71e351eb 442 Pfam PF08245 Mur ligase middle domain 113 284 1.2E-28 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL549_RS07535 122c0650105e1908724ca31f71e351eb 442 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 439 2.7E-131 T 28-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS07535 122c0650105e1908724ca31f71e351eb 442 SUPERFAMILY SSF51984 8 97 3.79E-17 T 28-03-2018 AL549_RS07535 122c0650105e1908724ca31f71e351eb 442 SUPERFAMILY SSF53244 304 441 1.88E-43 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL549_RS07535 122c0650105e1908724ca31f71e351eb 442 Gene3D G3DSA:3.40.50.720 2 97 9.2E-14 T 28-03-2018 AL549_RS07535 122c0650105e1908724ca31f71e351eb 442 SUPERFAMILY SSF53623 98 302 1.31E-53 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL549_RS21765 104761f494cdf301b2ab719a85256e47 539 PRINTS PR01900 YidC translocation/secretion protein signature 484 508 1.8E-26 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL549_RS21765 104761f494cdf301b2ab719a85256e47 539 PRINTS PR01900 YidC translocation/secretion protein signature 335 351 1.8E-26 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL549_RS21765 104761f494cdf301b2ab719a85256e47 539 PRINTS PR01900 YidC translocation/secretion protein signature 464 479 1.8E-26 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL549_RS21765 104761f494cdf301b2ab719a85256e47 539 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 349 528 2.3E-72 T 28-03-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AL549_RS21765 104761f494cdf301b2ab719a85256e47 539 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 348 5.5E-111 T 28-03-2018 IPR028053 Membrane insertase YidC, N-terminal AL549_RS21765 104761f494cdf301b2ab719a85256e47 539 Pfam PF14849 YidC periplasmic domain 65 339 2.6E-83 T 28-03-2018 IPR028053 Membrane insertase YidC, N-terminal AL549_RS21765 104761f494cdf301b2ab719a85256e47 539 Pfam PF02096 60Kd inner membrane protein 350 529 6.3E-63 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL549_RS21765 104761f494cdf301b2ab719a85256e47 539 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 531 25.794 T 28-03-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 AL549_RS21765 104761f494cdf301b2ab719a85256e47 539 PRINTS PR00701 60kDa inner membrane protein signature 320 340 6.6E-99 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL549_RS21765 104761f494cdf301b2ab719a85256e47 539 PRINTS PR00701 60kDa inner membrane protein signature 458 480 6.6E-99 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL549_RS21765 104761f494cdf301b2ab719a85256e47 539 PRINTS PR00701 60kDa inner membrane protein signature 411 434 6.6E-99 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL549_RS21765 104761f494cdf301b2ab719a85256e47 539 PRINTS PR00701 60kDa inner membrane protein signature 70 91 6.6E-99 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL549_RS21765 104761f494cdf301b2ab719a85256e47 539 PRINTS PR00701 60kDa inner membrane protein signature 495 518 6.6E-99 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL549_RS21765 104761f494cdf301b2ab719a85256e47 539 PRINTS PR00701 60kDa inner membrane protein signature 160 180 6.6E-99 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL549_RS21765 104761f494cdf301b2ab719a85256e47 539 PRINTS PR00701 60kDa inner membrane protein signature 2 23 6.6E-99 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL549_RS21765 104761f494cdf301b2ab719a85256e47 539 PRINTS PR00701 60kDa inner membrane protein signature 248 263 6.6E-99 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL549_RS21765 104761f494cdf301b2ab719a85256e47 539 PRINTS PR00701 60kDa inner membrane protein signature 213 231 6.6E-99 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL549_RS01700 624a387713f2de87b6197310e5d8ae5d 427 SUPERFAMILY SSF56935 36 427 8.55E-84 T 28-03-2018 AL549_RS01700 624a387713f2de87b6197310e5d8ae5d 427 Gene3D G3DSA:2.40.170.10 34 427 9.6E-69 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AL549_RS01700 624a387713f2de87b6197310e5d8ae5d 427 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 98 421 5.0E-152 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AL549_RS01700 624a387713f2de87b6197310e5d8ae5d 427 Pfam PF02264 LamB porin 72 427 3.6E-38 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AL549_RS21440 286af9570e38da0f657e329cb54e5c56 203 Pfam PF01081 KDPG and KHG aldolase 5 197 1.8E-73 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL549_RS21440 286af9570e38da0f657e329cb54e5c56 203 SUPERFAMILY SSF51569 3 201 7.33E-67 T 28-03-2018 AL549_RS21440 286af9570e38da0f657e329cb54e5c56 203 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 202 4.7E-83 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL549_RS21440 286af9570e38da0f657e329cb54e5c56 203 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 28-03-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL549_RS21440 286af9570e38da0f657e329cb54e5c56 203 Gene3D G3DSA:3.20.20.70 1 203 8.2E-35 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS21440 286af9570e38da0f657e329cb54e5c56 203 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 28-03-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL549_RS10725 33ca83cbfd50585697bf8eec762a4704 413 Gene3D G3DSA:3.40.47.10 263 413 3.3E-50 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS10725 33ca83cbfd50585697bf8eec762a4704 413 Gene3D G3DSA:3.40.47.10 6 260 6.7E-83 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS10725 33ca83cbfd50585697bf8eec762a4704 413 PIRSF PIRSF000447 1 413 2.2E-204 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AL549_RS10725 33ca83cbfd50585697bf8eec762a4704 413 SUPERFAMILY SSF53901 215 412 5.38E-67 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS10725 33ca83cbfd50585697bf8eec762a4704 413 SUPERFAMILY SSF53901 3 252 2.25E-80 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS10725 33ca83cbfd50585697bf8eec762a4704 413 SMART SM00825 Beta-ketoacyl synthase 6 413 9.5E-15 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL549_RS10725 33ca83cbfd50585697bf8eec762a4704 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 1.5E-194 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AL549_RS10725 33ca83cbfd50585697bf8eec762a4704 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site AL549_RS10725 33ca83cbfd50585697bf8eec762a4704 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 4.4E-64 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL549_RS10725 33ca83cbfd50585697bf8eec762a4704 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 8.7E-36 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL549_RS00800 12013c083083b1e323ee335628b6449f 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 2.0E-76 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS00800 12013c083083b1e323ee335628b6449f 218 SUPERFAMILY SSF55821 10 213 2.11E-81 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL549_RS00800 12013c083083b1e323ee335628b6449f 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 42.826 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS00800 12013c083083b1e323ee335628b6449f 218 Gene3D G3DSA:3.90.870.10 5 218 1.2E-86 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL549_RS00800 12013c083083b1e323ee335628b6449f 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 1.8E-78 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS10100 ee96adb8e4c06c8e0170e54b8c8696fc 616 SUPERFAMILY SSF52096 209 284 8.7E-29 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS10100 ee96adb8e4c06c8e0170e54b8c8696fc 616 SUPERFAMILY SSF52096 39 178 8.7E-29 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS10100 ee96adb8e4c06c8e0170e54b8c8696fc 616 Gene3D G3DSA:3.90.226.10 318 611 1.2E-54 T 28-03-2018 AL549_RS10100 ee96adb8e4c06c8e0170e54b8c8696fc 616 Pfam PF01343 Peptidase family S49 391 541 1.9E-44 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AL549_RS10100 ee96adb8e4c06c8e0170e54b8c8696fc 616 Pfam PF01343 Peptidase family S49 138 295 2.7E-30 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AL549_RS10100 ee96adb8e4c06c8e0170e54b8c8696fc 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 8.3E-197 T 28-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AL549_RS10100 ee96adb8e4c06c8e0170e54b8c8696fc 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 539 7.2E-50 T 28-03-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AL549_RS10100 ee96adb8e4c06c8e0170e54b8c8696fc 616 PIRSF PIRSF001217 8 616 2.1E-235 T 28-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AL549_RS10100 ee96adb8e4c06c8e0170e54b8c8696fc 616 SUPERFAMILY SSF52096 324 439 4.97E-41 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS10100 ee96adb8e4c06c8e0170e54b8c8696fc 616 SUPERFAMILY SSF52096 467 529 4.97E-41 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS10100 ee96adb8e4c06c8e0170e54b8c8696fc 616 Gene3D G3DSA:3.40.1750.10 186 295 3.4E-20 T 28-03-2018 AL549_RS11950 afa8418bccc3114417c529464ec0981d 1117 Pfam PF08463 EcoEI R protein C-terminal 965 1090 7.2E-14 T 28-03-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 AL549_RS11950 afa8418bccc3114417c529464ec0981d 1117 Gene3D G3DSA:3.40.50.300 142 520 1.1E-24 T 28-03-2018 AL549_RS11950 afa8418bccc3114417c529464ec0981d 1117 Pfam PF13643 Domain of unknown function (DUF4145) 24 104 6.4E-5 T 28-03-2018 IPR025285 Domain of unknown function DUF4145 AL549_RS11950 afa8418bccc3114417c529464ec0981d 1117 SMART SM00487 351 531 4.4E-15 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS11950 afa8418bccc3114417c529464ec0981d 1117 Pfam PF04851 Type III restriction enzyme, res subunit 356 503 6.1E-34 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL549_RS11950 afa8418bccc3114417c529464ec0981d 1117 Gene3D G3DSA:3.40.50.300 589 932 4.7E-14 T 28-03-2018 AL549_RS11950 afa8418bccc3114417c529464ec0981d 1117 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 139 315 3.2E-8 T 28-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AL549_RS11950 afa8418bccc3114417c529464ec0981d 1117 SUPERFAMILY SSF52540 317 523 2.25E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11950 afa8418bccc3114417c529464ec0981d 1117 Pfam PF00271 Helicase conserved C-terminal domain 617 716 1.9E-8 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS11950 afa8418bccc3114417c529464ec0981d 1117 SUPERFAMILY SSF52540 602 717 1.19E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11950 afa8418bccc3114417c529464ec0981d 1117 SUPERFAMILY SSF52540 469 528 1.19E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS10915 aae0a82cd37b72825c79a68b5c736fda 364 Gene3D G3DSA:2.120.10.30 73 330 5.0E-7 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL549_RS10915 aae0a82cd37b72825c79a68b5c736fda 364 Pfam PF07433 Protein of unknown function (DUF1513) 71 362 9.7E-113 T 28-03-2018 IPR008311 Uncharacterised conserved protein UCP028101 AL549_RS10915 aae0a82cd37b72825c79a68b5c736fda 364 PIRSF PIRSF028101 4 364 4.0E-168 T 28-03-2018 IPR008311 Uncharacterised conserved protein UCP028101 AL549_RS10915 aae0a82cd37b72825c79a68b5c736fda 364 SUPERFAMILY SSF50969 251 318 1.18E-9 T 28-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AL549_RS10915 aae0a82cd37b72825c79a68b5c736fda 364 SUPERFAMILY SSF50969 64 186 1.18E-9 T 28-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AL549_RS09850 e141d84fd34d7cddf77908c2905484c9 426 Gene3D G3DSA:1.10.8.60 319 411 1.1E-32 T 28-03-2018 AL549_RS09850 e141d84fd34d7cddf77908c2905484c9 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AL549_RS09850 e141d84fd34d7cddf77908c2905484c9 426 SMART SM00382 113 266 2.0E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS09850 e141d84fd34d7cddf77908c2905484c9 426 SUPERFAMILY SSF52540 63 404 7.34E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS09850 e141d84fd34d7cddf77908c2905484c9 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 3.7E-210 T 28-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AL549_RS09850 e141d84fd34d7cddf77908c2905484c9 426 SMART SM01086 319 414 7.7E-34 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL549_RS09850 e141d84fd34d7cddf77908c2905484c9 426 SMART SM00994 13 52 1.0E-24 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AL549_RS09850 e141d84fd34d7cddf77908c2905484c9 426 Gene3D G3DSA:3.40.50.300 57 317 1.8E-67 T 28-03-2018 AL549_RS09850 e141d84fd34d7cddf77908c2905484c9 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 28-03-2018 AL549_RS09850 e141d84fd34d7cddf77908c2905484c9 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 53.477 T 28-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AL549_RS09850 e141d84fd34d7cddf77908c2905484c9 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 2.6E-48 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL549_RS09850 e141d84fd34d7cddf77908c2905484c9 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 2.2E-15 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL549_RS04725 2d510e2a1e0fce3d1493766b958653c7 402 PRINTS PR00714 Phosphomannose isomerase type I signature 248 267 2.0E-67 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS04725 2d510e2a1e0fce3d1493766b958653c7 402 PRINTS PR00714 Phosphomannose isomerase type I signature 135 158 2.0E-67 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS04725 2d510e2a1e0fce3d1493766b958653c7 402 PRINTS PR00714 Phosphomannose isomerase type I signature 14 32 2.0E-67 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS04725 2d510e2a1e0fce3d1493766b958653c7 402 PRINTS PR00714 Phosphomannose isomerase type I signature 267 286 2.0E-67 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS04725 2d510e2a1e0fce3d1493766b958653c7 402 PRINTS PR00714 Phosphomannose isomerase type I signature 232 247 2.0E-67 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS04725 2d510e2a1e0fce3d1493766b958653c7 402 PRINTS PR00714 Phosphomannose isomerase type I signature 90 111 2.0E-67 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS04725 2d510e2a1e0fce3d1493766b958653c7 402 PRINTS PR00714 Phosphomannose isomerase type I signature 286 305 2.0E-67 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS04725 2d510e2a1e0fce3d1493766b958653c7 402 PRINTS PR00714 Phosphomannose isomerase type I signature 42 57 2.0E-67 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS04725 2d510e2a1e0fce3d1493766b958653c7 402 Gene3D G3DSA:2.60.120.10 306 402 5.8E-13 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS04725 2d510e2a1e0fce3d1493766b958653c7 402 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 135 143 - T 28-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS04725 2d510e2a1e0fce3d1493766b958653c7 402 Gene3D G3DSA:2.60.120.10 15 170 3.5E-48 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS04725 2d510e2a1e0fce3d1493766b958653c7 402 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 9 394 1.1E-92 T 28-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS04725 2d510e2a1e0fce3d1493766b958653c7 402 PIRSF PIRSF001480 8 402 1.2E-100 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS04725 2d510e2a1e0fce3d1493766b958653c7 402 SUPERFAMILY SSF51182 9 393 4.05E-102 T 28-03-2018 IPR011051 RmlC-like cupin domain AL549_RS04725 2d510e2a1e0fce3d1493766b958653c7 402 Pfam PF01238 Phosphomannose isomerase type I 12 366 1.5E-81 T 28-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS04725 2d510e2a1e0fce3d1493766b958653c7 402 Gene3D G3DSA:1.10.441.10 171 274 8.6E-31 T 28-03-2018 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 SUPERFAMILY SSF50677 205 408 9.1E-55 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 939 21.481 T 28-03-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 854 5.1E-295 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 Gene3D G3DSA:1.10.730.10 583 805 3.2E-46 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.3E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.3E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.3E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.3E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.3E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 Pfam PF06827 Zinc finger found in FPG and IleRS 909 936 2.0E-6 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 Pfam PF08264 Anticodon-binding domain of tRNA 690 850 3.1E-25 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 Gene3D G3DSA:3.90.740.10 205 508 2.7E-99 T 28-03-2018 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 9.9E-220 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 SUPERFAMILY SSF52374 408 652 2.21E-138 T 28-03-2018 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 SUPERFAMILY SSF52374 4 202 2.21E-138 T 28-03-2018 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 Gene3D G3DSA:3.30.2320.20 813 906 6.1E-23 T 28-03-2018 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 SUPERFAMILY SSF47323 657 939 1.07E-72 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS07895 5da8f478ca0ffdc54be8de592e631b96 948 Gene3D G3DSA:3.40.50.620 42 124 1.5E-29 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS16735 5a67414d1551419978bfdc9324d2aafd 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 3.5E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS16735 5a67414d1551419978bfdc9324d2aafd 246 SUPERFAMILY SSF161098 110 227 7.98E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS16735 5a67414d1551419978bfdc9324d2aafd 246 SUPERFAMILY SSF161098 11 78 7.98E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS16735 5a67414d1551419978bfdc9324d2aafd 246 Gene3D G3DSA:1.10.3720.10 3 246 1.5E-36 T 28-03-2018 AL549_RS16735 5a67414d1551419978bfdc9324d2aafd 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 74 1.7E-15 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL549_RS07570 18f64cc67cc5d96267af27c635e1edb5 305 Gene3D G3DSA:3.30.230.20 1 128 9.0E-51 T 28-03-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL549_RS07570 18f64cc67cc5d96267af27c635e1edb5 305 SUPERFAMILY SSF54211 134 278 3.49E-53 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS07570 18f64cc67cc5d96267af27c635e1edb5 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.719 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL549_RS07570 18f64cc67cc5d96267af27c635e1edb5 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 8.0E-144 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL549_RS07570 18f64cc67cc5d96267af27c635e1edb5 305 Gene3D G3DSA:3.30.1700.10 129 299 1.3E-68 T 28-03-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL549_RS07570 18f64cc67cc5d96267af27c635e1edb5 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 2.3E-109 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL549_RS07570 18f64cc67cc5d96267af27c635e1edb5 305 SUPERFAMILY SSF54211 3 125 1.67E-42 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS08405 be4b7d28c18d733ade108fd2a14cbe0f 145 Pfam PF04945 YHS domain 39 83 3.8E-11 T 28-03-2018 IPR007029 YHS domain AL549_RS08405 be4b7d28c18d733ade108fd2a14cbe0f 145 Gene3D G3DSA:1.10.620.20 35 143 1.3E-8 T 28-03-2018 AL549_RS16395 d625479656f801b162bb784a581a5061 189 SUPERFAMILY SSF101327 3 175 1.24E-30 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 AL549_RS16395 d625479656f801b162bb784a581a5061 189 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 3 174 2.5E-42 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 AL549_RS16395 d625479656f801b162bb784a581a5061 189 Pfam PF03695 Uncharacterised protein family (UPF0149) 3 178 2.6E-31 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 AL549_RS16610 f09e73b334679da07f329c7717271ad7 485 Hamap MF_00484 Glycogen synthase [glgA]. 6 483 38.831 T 28-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AL549_RS16610 f09e73b334679da07f329c7717271ad7 485 Gene3D G3DSA:3.40.50.2000 2 263 3.1E-5 T 28-03-2018 AL549_RS16610 f09e73b334679da07f329c7717271ad7 485 SUPERFAMILY SSF53756 5 485 2.27E-108 T 28-03-2018 AL549_RS16610 f09e73b334679da07f329c7717271ad7 485 Pfam PF08323 Starch synthase catalytic domain 8 239 2.9E-65 T 28-03-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AL549_RS16610 f09e73b334679da07f329c7717271ad7 485 Pfam PF00534 Glycosyl transferases group 1 299 446 1.8E-13 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL549_RS16610 f09e73b334679da07f329c7717271ad7 485 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 7 482 2.8E-162 T 28-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AL549_RS16610 f09e73b334679da07f329c7717271ad7 485 Gene3D G3DSA:3.40.50.2000 264 479 2.1E-36 T 28-03-2018 AL549_RS15260 8146b3f13c6d78a1ae4c15e337eac11d 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 55 1.9E-7 T 28-03-2018 AL549_RS15260 8146b3f13c6d78a1ae4c15e337eac11d 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 74 3.9E-21 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL549_RS15260 8146b3f13c6d78a1ae4c15e337eac11d 84 SUPERFAMILY SSF143120 1 81 1.27E-23 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL549_RS15260 8146b3f13c6d78a1ae4c15e337eac11d 84 Gene3D G3DSA:3.40.1620.10 1 40 4.7E-15 T 28-03-2018 AL549_RS03660 743e277c98b20a510b4243819eb6a1b8 511 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 304 475 7.3E-39 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS03660 743e277c98b20a510b4243819eb6a1b8 511 SUPERFAMILY SSF58104 202 510 1.83E-63 T 28-03-2018 AL549_RS03660 743e277c98b20a510b4243819eb6a1b8 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 376 405 6.7E-20 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS03660 743e277c98b20a510b4243819eb6a1b8 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 6.7E-20 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS03660 743e277c98b20a510b4243819eb6a1b8 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 347 374 6.7E-20 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS03660 743e277c98b20a510b4243819eb6a1b8 511 SMART SM00304 180 234 4.7E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS03660 743e277c98b20a510b4243819eb6a1b8 511 SMART SM00283 249 510 2.4E-58 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS03660 743e277c98b20a510b4243819eb6a1b8 511 Gene3D G3DSA:1.10.287.950 468 510 0.0098 T 28-03-2018 AL549_RS03660 743e277c98b20a510b4243819eb6a1b8 511 Gene3D G3DSA:1.10.287.950 277 467 7.3E-49 T 28-03-2018 AL549_RS03660 743e277c98b20a510b4243819eb6a1b8 511 Gene3D G3DSA:1.10.287.950 173 276 8.2E-4 T 28-03-2018 AL549_RS09360 d668fa1649cc971ad5e55c01d2c6bf82 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 224 438 8.7E-47 T 28-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 AL549_RS09360 d668fa1649cc971ad5e55c01d2c6bf82 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 215 2.2E-58 T 28-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 AL549_RS09360 d668fa1649cc971ad5e55c01d2c6bf82 462 Gene3D G3DSA:1.20.1250.20 7 216 9.0E-24 T 28-03-2018 AL549_RS09360 d668fa1649cc971ad5e55c01d2c6bf82 462 Pfam PF00854 POT family 228 405 4.9E-32 T 28-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 AL549_RS09360 d668fa1649cc971ad5e55c01d2c6bf82 462 Pfam PF00854 POT family 85 197 2.1E-28 T 28-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 AL549_RS09360 d668fa1649cc971ad5e55c01d2c6bf82 462 SUPERFAMILY SSF103473 8 436 2.49E-41 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS09360 d668fa1649cc971ad5e55c01d2c6bf82 462 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AL549_RS09360 d668fa1649cc971ad5e55c01d2c6bf82 462 Gene3D G3DSA:1.20.1250.20 217 460 1.2E-18 T 28-03-2018 AL549_RS03470 14fc8450b7ec31f755e7dd0db269548b 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 2.5E-145 T 28-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AL549_RS22205 b0f9c75157877c3206a06719a952484b 419 Gene3D G3DSA:2.40.50.140 49 116 3.0E-31 T 28-03-2018 AL549_RS22205 b0f9c75157877c3206a06719a952484b 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 2.4E-18 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AL549_RS22205 b0f9c75157877c3206a06719a952484b 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.1E-22 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL549_RS22205 b0f9c75157877c3206a06719a952484b 419 SMART SM00382 170 355 9.9E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS22205 b0f9c75157877c3206a06719a952484b 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.4E-220 T 28-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AL549_RS22205 b0f9c75157877c3206a06719a952484b 419 Gene3D G3DSA:3.40.50.300 129 419 1.5E-58 T 28-03-2018 AL549_RS22205 b0f9c75157877c3206a06719a952484b 419 SUPERFAMILY SSF68912 1 46 2.24E-12 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AL549_RS22205 b0f9c75157877c3206a06719a952484b 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 7.7E-32 T 28-03-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 AL549_RS22205 b0f9c75157877c3206a06719a952484b 419 SUPERFAMILY SSF50249 48 125 7.42E-29 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS22205 b0f9c75157877c3206a06719a952484b 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 253.558 T 28-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AL549_RS22205 b0f9c75157877c3206a06719a952484b 419 SMART SM00357 52 118 1.7E-17 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AL549_RS22205 b0f9c75157877c3206a06719a952484b 419 Gene3D G3DSA:1.10.720.10 1 43 5.8E-14 T 28-03-2018 AL549_RS22205 b0f9c75157877c3206a06719a952484b 419 SMART SM00959 5 47 1.3E-18 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AL549_RS22205 b0f9c75157877c3206a06719a952484b 419 SUPERFAMILY SSF52540 90 371 1.6E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11345 eb1c247fa30a6fa570e2b2b85351e379 484 SUPERFAMILY SSF56024 273 469 3.36E-47 T 28-03-2018 AL549_RS11345 eb1c247fa30a6fa570e2b2b85351e379 484 Gene3D G3DSA:3.30.870.10 306 463 8.0E-26 T 28-03-2018 AL549_RS11345 eb1c247fa30a6fa570e2b2b85351e379 484 Gene3D G3DSA:3.30.870.10 116 305 1.3E-29 T 28-03-2018 AL549_RS11345 eb1c247fa30a6fa570e2b2b85351e379 484 SMART SM00155 219 246 4.0E-6 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL549_RS11345 eb1c247fa30a6fa570e2b2b85351e379 484 SMART SM00155 397 424 1.9E-6 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL549_RS11345 eb1c247fa30a6fa570e2b2b85351e379 484 SUPERFAMILY SSF56024 67 313 3.66E-50 T 28-03-2018 AL549_RS11345 eb1c247fa30a6fa570e2b2b85351e379 484 PIRSF PIRSF000850 384 474 0.87 T 28-03-2018 AL549_RS11345 eb1c247fa30a6fa570e2b2b85351e379 484 PIRSF PIRSF000850 287 376 0.0075 T 28-03-2018 AL549_RS11345 eb1c247fa30a6fa570e2b2b85351e379 484 PIRSF PIRSF000850 105 252 24.0 T 28-03-2018 AL549_RS11345 eb1c247fa30a6fa570e2b2b85351e379 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 49.597 T 28-03-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 AL549_RS11345 eb1c247fa30a6fa570e2b2b85351e379 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 59 3.9E-6 T 28-03-2018 IPR027379 Cardiolipin synthase N-terminal AL549_RS11345 eb1c247fa30a6fa570e2b2b85351e379 484 Pfam PF13091 PLD-like domain 325 448 1.8E-24 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL549_RS11345 eb1c247fa30a6fa570e2b2b85351e379 484 Pfam PF13091 PLD-like domain 135 266 2.5E-16 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL549_RS11345 eb1c247fa30a6fa570e2b2b85351e379 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 12 484 1.4E-149 T 28-03-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 AL549_RS18685 ac24bb3da8a194789265ea544c55d0f9 340 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL549_RS18685 ac24bb3da8a194789265ea544c55d0f9 340 SUPERFAMILY SSF53335 157 323 2.09E-26 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS18685 ac24bb3da8a194789265ea544c55d0f9 340 Gene3D G3DSA:3.40.50.150 165 340 3.5E-26 T 28-03-2018 AL549_RS18685 ac24bb3da8a194789265ea544c55d0f9 340 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 3.3E-58 T 28-03-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS18685 ac24bb3da8a194789265ea544c55d0f9 340 Pfam PF05175 Methyltransferase small domain 172 336 3.6E-61 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AL549_RS18685 ac24bb3da8a194789265ea544c55d0f9 340 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.996 T 28-03-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS09490 86494e32fe4194e608de937f85478945 941 SUPERFAMILY SSF52518 122 545 6.48E-89 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS09490 86494e32fe4194e608de937f85478945 941 Gene3D G3DSA:3.40.50.970 590 799 7.7E-58 T 28-03-2018 AL549_RS09490 86494e32fe4194e608de937f85478945 941 SMART SM00861 594 787 4.7E-64 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL549_RS09490 86494e32fe4194e608de937f85478945 941 Pfam PF00676 Dehydrogenase E1 component 222 517 1.5E-49 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 AL549_RS09490 86494e32fe4194e608de937f85478945 941 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 28-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL549_RS09490 86494e32fe4194e608de937f85478945 941 SUPERFAMILY SSF52518 577 794 5.89E-52 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS09490 86494e32fe4194e608de937f85478945 941 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 9.5E-66 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL549_RS09490 86494e32fe4194e608de937f85478945 941 Gene3D G3DSA:3.40.50.970 168 523 1.4E-91 T 28-03-2018 AL549_RS09490 86494e32fe4194e608de937f85478945 941 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 51 1.0E-13 T 28-03-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL549_RS09490 86494e32fe4194e608de937f85478945 941 Gene3D G3DSA:1.10.287.1150 84 167 5.0E-25 T 28-03-2018 AL549_RS09490 86494e32fe4194e608de937f85478945 941 PIRSF PIRSF000157 1 935 0.0 T 28-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL549_RS09490 86494e32fe4194e608de937f85478945 941 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 1.0E-53 T 28-03-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL549_RS18220 cab82cda905992ebf196ebfb036f821b 333 Gene3D G3DSA:1.10.260.40 2 54 5.2E-22 T 28-03-2018 AL549_RS18220 cab82cda905992ebf196ebfb036f821b 333 Gene3D G3DSA:3.40.50.2300 55 174 1.5E-33 T 28-03-2018 AL549_RS18220 cab82cda905992ebf196ebfb036f821b 333 SUPERFAMILY SSF47413 1 60 9.38E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS18220 cab82cda905992ebf196ebfb036f821b 333 SMART SM00354 1 71 1.2E-31 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS18220 cab82cda905992ebf196ebfb036f821b 333 SUPERFAMILY SSF53822 61 330 1.22E-83 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS18220 cab82cda905992ebf196ebfb036f821b 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.3E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS18220 cab82cda905992ebf196ebfb036f821b 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.3E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS18220 cab82cda905992ebf196ebfb036f821b 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 AL549_RS18220 cab82cda905992ebf196ebfb036f821b 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.5E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS18220 cab82cda905992ebf196ebfb036f821b 333 Pfam PF13377 Periplasmic binding protein-like domain 168 329 1.4E-36 T 28-03-2018 AL549_RS18220 cab82cda905992ebf196ebfb036f821b 333 Gene3D G3DSA:3.40.50.2300 175 309 8.7E-46 T 28-03-2018 AL549_RS17400 229ac5e831eda015de85bfa3e238911d 295 PIRSF PIRSF003092 6 287 1.5E-86 T 28-03-2018 IPR025501 ATP binding protein MinD AL549_RS17400 229ac5e831eda015de85bfa3e238911d 295 SUPERFAMILY SSF52540 22 283 7.88E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS17400 229ac5e831eda015de85bfa3e238911d 295 Gene3D G3DSA:3.40.50.300 21 265 1.6E-50 T 28-03-2018 AL549_RS17400 229ac5e831eda015de85bfa3e238911d 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 261 1.8E-22 T 28-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AL549_RS23530 c061b19b1dea93d1ccf3d8deb46dc635 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.387 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL549_RS23530 c061b19b1dea93d1ccf3d8deb46dc635 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 129 2.0E-16 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AL549_RS23530 c061b19b1dea93d1ccf3d8deb46dc635 156 Gene3D G3DSA:1.10.10.10 8 69 3.4E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS23530 c061b19b1dea93d1ccf3d8deb46dc635 156 SUPERFAMILY SSF46785 4 77 1.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS23530 c061b19b1dea93d1ccf3d8deb46dc635 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 2.2E-21 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AL549_RS23530 c061b19b1dea93d1ccf3d8deb46dc635 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 2.3E-23 T 28-03-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 AL549_RS23530 c061b19b1dea93d1ccf3d8deb46dc635 156 Gene3D G3DSA:3.30.1360.40 76 151 6.3E-27 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AL549_RS23530 c061b19b1dea93d1ccf3d8deb46dc635 156 SUPERFAMILY SSF55252 82 151 2.62E-19 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AL549_RS23530 c061b19b1dea93d1ccf3d8deb46dc635 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 3.4E-43 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL549_RS23530 c061b19b1dea93d1ccf3d8deb46dc635 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 8.4E-24 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL549_RS23530 c061b19b1dea93d1ccf3d8deb46dc635 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 8.4E-24 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL549_RS23530 c061b19b1dea93d1ccf3d8deb46dc635 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 8.4E-24 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL549_RS23530 c061b19b1dea93d1ccf3d8deb46dc635 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 8.4E-24 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL549_RS16485 a56582d243e739fad42fb11cc85c7dae 204 Gene3D G3DSA:2.40.50.140 2 66 1.2E-23 T 28-03-2018 AL549_RS16485 a56582d243e739fad42fb11cc85c7dae 204 Gene3D G3DSA:1.10.150.20 67 142 2.9E-13 T 28-03-2018 AL549_RS16485 a56582d243e739fad42fb11cc85c7dae 204 SMART SM00278 108 127 0.071 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL549_RS16485 a56582d243e739fad42fb11cc85c7dae 204 SMART SM00278 73 92 180.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL549_RS16485 a56582d243e739fad42fb11cc85c7dae 204 Gene3D G3DSA:1.10.8.10 158 203 1.5E-17 T 28-03-2018 AL549_RS16485 a56582d243e739fad42fb11cc85c7dae 204 Pfam PF01330 RuvA N terminal domain 2 62 1.3E-20 T 28-03-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AL549_RS16485 a56582d243e739fad42fb11cc85c7dae 204 SUPERFAMILY SSF47781 66 137 7.23E-20 T 28-03-2018 IPR010994 RuvA domain 2-like AL549_RS16485 a56582d243e739fad42fb11cc85c7dae 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 5.0E-15 T 28-03-2018 AL549_RS16485 a56582d243e739fad42fb11cc85c7dae 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 31.8 T 28-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AL549_RS16485 a56582d243e739fad42fb11cc85c7dae 204 SUPERFAMILY SSF46929 158 203 1.96E-12 T 28-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AL549_RS16485 a56582d243e739fad42fb11cc85c7dae 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 1.3E-65 T 28-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AL549_RS16485 a56582d243e739fad42fb11cc85c7dae 204 SUPERFAMILY SSF50249 2 63 9.14E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS16485 a56582d243e739fad42fb11cc85c7dae 204 Pfam PF07499 RuvA, C-terminal domain 160 203 5.0E-17 T 28-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AL549_RS04900 92f531f022e1f57700a3d0abc37dee72 408 Gene3D G3DSA:2.40.37.10 256 408 7.2E-49 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL549_RS04900 92f531f022e1f57700a3d0abc37dee72 408 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 72 82 - T 28-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS04900 92f531f022e1f57700a3d0abc37dee72 408 PRINTS PR00992 Alanine racemase signature 201 212 3.2E-30 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS04900 92f531f022e1f57700a3d0abc37dee72 408 PRINTS PR00992 Alanine racemase signature 244 271 3.2E-30 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS04900 92f531f022e1f57700a3d0abc37dee72 408 PRINTS PR00992 Alanine racemase signature 333 350 3.2E-30 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS04900 92f531f022e1f57700a3d0abc37dee72 408 PRINTS PR00992 Alanine racemase signature 312 327 3.2E-30 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS04900 92f531f022e1f57700a3d0abc37dee72 408 PRINTS PR00992 Alanine racemase signature 67 83 3.2E-30 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS04900 92f531f022e1f57700a3d0abc37dee72 408 PRINTS PR00992 Alanine racemase signature 103 121 3.2E-30 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS04900 92f531f022e1f57700a3d0abc37dee72 408 PRINTS PR00992 Alanine racemase signature 165 177 3.2E-30 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS04900 92f531f022e1f57700a3d0abc37dee72 408 Pfam PF01168 Alanine racemase, N-terminal domain 48 271 2.2E-50 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS04900 92f531f022e1f57700a3d0abc37dee72 408 SMART SM01005 279 407 2.3E-41 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS04900 92f531f022e1f57700a3d0abc37dee72 408 Hamap MF_01201 Alanine racemase. 41 407 25.985 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS04900 92f531f022e1f57700a3d0abc37dee72 408 SUPERFAMILY SSF50621 272 407 3.21E-39 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL549_RS04900 92f531f022e1f57700a3d0abc37dee72 408 TIGRFAM TIGR00492 alr: alanine racemase 44 407 5.9E-71 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS04900 92f531f022e1f57700a3d0abc37dee72 408 SUPERFAMILY SSF51419 48 281 1.26E-47 T 28-03-2018 IPR029066 PLP-binding barrel AL549_RS04900 92f531f022e1f57700a3d0abc37dee72 408 Gene3D G3DSA:3.20.20.10 50 255 1.3E-34 T 28-03-2018 IPR029066 PLP-binding barrel AL549_RS04900 92f531f022e1f57700a3d0abc37dee72 408 Pfam PF00842 Alanine racemase, C-terminal domain 280 406 3.5E-31 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS05225 eabaf4776dae917eefedca685adb0284 447 Pfam PF01523 Putative modulator of DNA gyrase 24 311 6.6E-43 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL549_RS05225 eabaf4776dae917eefedca685adb0284 447 Gene3D G3DSA:3.30.2290.10 1 216 1.0E-29 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain AL549_RS05225 eabaf4776dae917eefedca685adb0284 447 SUPERFAMILY SSF111283 7 445 1.28E-94 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL549_RS09700 acc87da945a065e6e29cd744818d9b5a 514 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 145 161 - T 28-03-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AL549_RS09700 acc87da945a065e6e29cd744818d9b5a 514 SUPERFAMILY SSF48557 4 511 1.1E-172 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL549_RS09700 acc87da945a065e6e29cd744818d9b5a 514 Pfam PF00221 Aromatic amino acid lyase 16 466 1.4E-162 T 28-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AL549_RS09700 acc87da945a065e6e29cd744818d9b5a 514 Gene3D G3DSA:1.10.275.10 7 203 6.0E-62 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AL549_RS09700 acc87da945a065e6e29cd744818d9b5a 514 Gene3D G3DSA:1.20.200.10 204 513 1.0E-100 T 28-03-2018 AL549_RS18695 817a06280ed2e8c121c84f7e9ea7e217 557 Gene3D G3DSA:3.90.76.10 43 184 2.2E-30 T 28-03-2018 AL549_RS18695 817a06280ed2e8c121c84f7e9ea7e217 557 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 81 103 - T 28-03-2018 IPR023765 Solute-binding protein family 5, conserved site AL549_RS18695 817a06280ed2e8c121c84f7e9ea7e217 557 Gene3D G3DSA:3.40.190.10 185 283 1.5E-9 T 28-03-2018 AL549_RS18695 817a06280ed2e8c121c84f7e9ea7e217 557 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 452 4.9E-76 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL549_RS18695 817a06280ed2e8c121c84f7e9ea7e217 557 Gene3D G3DSA:3.10.105.10 284 514 1.8E-51 T 28-03-2018 AL549_RS18695 817a06280ed2e8c121c84f7e9ea7e217 557 SUPERFAMILY SSF53850 37 541 9.77E-106 T 28-03-2018 AL549_RS18695 817a06280ed2e8c121c84f7e9ea7e217 557 PIRSF PIRSF002741 2 539 9.2E-69 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL549_RS08415 b7f196d24297df3a6195259211d1d5da 160 Gene3D G3DSA:1.10.260.40 7 144 1.5E-11 T 28-03-2018 AL549_RS08415 b7f196d24297df3a6195259211d1d5da 160 SMART SM00530 87 143 9.3E-4 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL549_RS08415 b7f196d24297df3a6195259211d1d5da 160 SUPERFAMILY SSF47413 84 144 1.19E-8 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS08415 b7f196d24297df3a6195259211d1d5da 160 Pfam PF01381 Helix-turn-helix 88 139 8.5E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL549_RS00835 3b27c0127c1e0e20d0b14e6b80f0f0a1 239 Gene3D G3DSA:3.40.50.720 3 236 4.6E-59 T 28-03-2018 AL549_RS00835 3b27c0127c1e0e20d0b14e6b80f0f0a1 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.9E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS00835 3b27c0127c1e0e20d0b14e6b80f0f0a1 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.9E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS00835 3b27c0127c1e0e20d0b14e6b80f0f0a1 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.9E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS00835 3b27c0127c1e0e20d0b14e6b80f0f0a1 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.9E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS00835 3b27c0127c1e0e20d0b14e6b80f0f0a1 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.9E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS00835 3b27c0127c1e0e20d0b14e6b80f0f0a1 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.9E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS00835 3b27c0127c1e0e20d0b14e6b80f0f0a1 239 Pfam PF00106 short chain dehydrogenase 3 189 2.7E-53 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS00835 3b27c0127c1e0e20d0b14e6b80f0f0a1 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL549_RS00835 3b27c0127c1e0e20d0b14e6b80f0f0a1 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 5.1E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS00835 3b27c0127c1e0e20d0b14e6b80f0f0a1 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 5.1E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS00835 3b27c0127c1e0e20d0b14e6b80f0f0a1 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 5.1E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS00835 3b27c0127c1e0e20d0b14e6b80f0f0a1 239 SUPERFAMILY SSF51735 3 224 3.04E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS07375 b40625423efb081d2dc1a20c18bf83d1 476 Pfam PF00294 pfkB family carbohydrate kinase 13 302 1.4E-46 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AL549_RS07375 b40625423efb081d2dc1a20c18bf83d1 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 5.3E-62 T 28-03-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AL549_RS07375 b40625423efb081d2dc1a20c18bf83d1 476 Gene3D G3DSA:3.40.50.620 326 476 9.3E-27 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS07375 b40625423efb081d2dc1a20c18bf83d1 476 Pfam PF01467 Cytidylyltransferase-like 345 468 1.3E-15 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL549_RS07375 b40625423efb081d2dc1a20c18bf83d1 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL549_RS07375 b40625423efb081d2dc1a20c18bf83d1 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.696 T 28-03-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AL549_RS07375 b40625423efb081d2dc1a20c18bf83d1 476 Gene3D G3DSA:3.40.1190.20 6 310 2.1E-58 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS07375 b40625423efb081d2dc1a20c18bf83d1 476 SUPERFAMILY SSF52374 340 471 2.61E-23 T 28-03-2018 AL549_RS07375 b40625423efb081d2dc1a20c18bf83d1 476 SUPERFAMILY SSF53613 12 304 5.61E-58 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS07375 b40625423efb081d2dc1a20c18bf83d1 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 3.6E-125 T 28-03-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AL549_RS07375 b40625423efb081d2dc1a20c18bf83d1 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 5.4E-18 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL549_RS22195 5db1d1bffefd8fd33dd606e43fd66c40 435 Pfam PF00271 Helicase conserved C-terminal domain 243 351 4.2E-30 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS22195 5db1d1bffefd8fd33dd606e43fd66c40 435 SMART SM00490 270 351 1.3E-31 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS22195 5db1d1bffefd8fd33dd606e43fd66c40 435 SMART SM00487 28 234 1.0E-54 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS22195 5db1d1bffefd8fd33dd606e43fd66c40 435 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.365 T 28-03-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 AL549_RS22195 5db1d1bffefd8fd33dd606e43fd66c40 435 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL549_RS22195 5db1d1bffefd8fd33dd606e43fd66c40 435 SUPERFAMILY SSF52540 85 364 7.41E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS22195 5db1d1bffefd8fd33dd606e43fd66c40 435 Gene3D G3DSA:3.40.50.300 237 435 2.0E-44 T 28-03-2018 AL549_RS22195 5db1d1bffefd8fd33dd606e43fd66c40 435 Gene3D G3DSA:3.40.50.300 2 236 2.1E-52 T 28-03-2018 AL549_RS22195 5db1d1bffefd8fd33dd606e43fd66c40 435 Pfam PF00270 DEAD/DEAH box helicase 33 207 3.6E-45 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL549_RS20865 27f341de269cb900200441789b644483 549 SMART SM00304 218 272 1.5E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS20865 27f341de269cb900200441789b644483 549 Gene3D G3DSA:1.10.287.950 328 549 2.5E-47 T 28-03-2018 AL549_RS20865 27f341de269cb900200441789b644483 549 SMART SM01049 41 135 7.4E-45 T 28-03-2018 IPR033480 Single Cache domain 2 AL549_RS20865 27f341de269cb900200441789b644483 549 SUPERFAMILY SSF58104 240 549 2.62E-70 T 28-03-2018 AL549_RS20865 27f341de269cb900200441789b644483 549 Gene3D G3DSA:3.30.450.20 35 202 4.9E-56 T 28-03-2018 AL549_RS20865 27f341de269cb900200441789b644483 549 Pfam PF00672 HAMP domain 219 267 1.0E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS20865 27f341de269cb900200441789b644483 549 SMART SM00283 287 548 2.1E-61 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS20865 27f341de269cb900200441789b644483 549 Pfam PF17200 Single Cache domain 2 44 193 8.9E-46 T 28-03-2018 IPR033480 Single Cache domain 2 AL549_RS20865 27f341de269cb900200441789b644483 549 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 333 512 5.8E-40 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS20865 27f341de269cb900200441789b644483 549 Gene3D G3DSA:1.10.287.950 236 327 3.0E-5 T 28-03-2018 AL549_RS07915 24061acac679f9e1705c49acab94ba3d 242 Pfam PF04397 LytTr DNA-binding domain 146 238 5.2E-21 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AL549_RS07915 24061acac679f9e1705c49acab94ba3d 242 SMART SM00850 145 239 6.2E-24 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AL549_RS07915 24061acac679f9e1705c49acab94ba3d 242 SUPERFAMILY SSF52172 1 121 2.56E-30 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS07915 24061acac679f9e1705c49acab94ba3d 242 Gene3D G3DSA:3.40.50.2300 1 139 8.8E-29 T 28-03-2018 AL549_RS07915 24061acac679f9e1705c49acab94ba3d 242 Pfam PF00072 Response regulator receiver domain 5 112 3.8E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS07915 24061acac679f9e1705c49acab94ba3d 242 SMART SM00448 2 112 2.6E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS07915 24061acac679f9e1705c49acab94ba3d 242 Gene3D G3DSA:2.20.25.10 203 239 1.2E-8 T 28-03-2018 AL549_RS23735 d4284e508bb386d13028a471a509be11 587 Gene3D G3DSA:3.90.980.10 115 246 2.6E-44 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal AL549_RS23735 d4284e508bb386d13028a471a509be11 587 Pfam PF01807 CHC2 zinc finger 6 101 2.5E-41 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AL549_RS23735 d4284e508bb386d13028a471a509be11 587 Hamap MF_00974 DNA primase [dnaG]. 4 583 29.66 T 28-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AL549_RS23735 d4284e508bb386d13028a471a509be11 587 Gene3D G3DSA:1.20.50.20 375 423 4.6E-18 T 28-03-2018 AL549_RS23735 d4284e508bb386d13028a471a509be11 587 SMART SM00766 457 582 1.7E-53 T 28-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AL549_RS23735 d4284e508bb386d13028a471a509be11 587 Gene3D G3DSA:3.40.1360.10 247 374 2.4E-30 T 28-03-2018 AL549_RS23735 d4284e508bb386d13028a471a509be11 587 Gene3D G3DSA:1.10.860.10 441 587 6.2E-40 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AL549_RS23735 d4284e508bb386d13028a471a509be11 587 TIGRFAM TIGR01391 dnaG: DNA primase 5 422 1.2E-147 T 28-03-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AL549_RS23735 d4284e508bb386d13028a471a509be11 587 PIRSF PIRSF002811 2 586 9.6E-145 T 28-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AL549_RS23735 d4284e508bb386d13028a471a509be11 587 Gene3D G3DSA:3.90.580.10 1 103 9.1E-37 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AL549_RS23735 d4284e508bb386d13028a471a509be11 587 Pfam PF10410 DnaB-helicase binding domain of primase 375 427 1.8E-9 T 28-03-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 AL549_RS23735 d4284e508bb386d13028a471a509be11 587 SMART SM00400 36 90 2.1E-36 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AL549_RS23735 d4284e508bb386d13028a471a509be11 587 Pfam PF08278 DNA primase DnaG DnaB-binding 458 581 5.5E-35 T 28-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AL549_RS23735 d4284e508bb386d13028a471a509be11 587 SMART SM00493 265 336 5.6E-19 T 28-03-2018 IPR006171 TOPRIM domain AL549_RS23735 d4284e508bb386d13028a471a509be11 587 Pfam PF13155 Toprim-like 269 356 5.9E-14 T 28-03-2018 AL549_RS23735 d4284e508bb386d13028a471a509be11 587 Pfam PF08275 DNA primase catalytic core, N-terminal domain 132 256 3.6E-42 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal AL549_RS23735 d4284e508bb386d13028a471a509be11 587 SUPERFAMILY SSF57783 4 101 4.76E-38 T 28-03-2018 AL549_RS23735 d4284e508bb386d13028a471a509be11 587 SUPERFAMILY SSF56731 121 433 2.35E-113 T 28-03-2018 AL549_RS23735 d4284e508bb386d13028a471a509be11 587 SUPERFAMILY SSF117023 454 585 4.71E-43 T 28-03-2018 AL549_RS22900 6e955f2d48c18b49d83bb855700e3782 352 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 344 4.9E-149 T 28-03-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 AL549_RS22900 6e955f2d48c18b49d83bb855700e3782 352 SUPERFAMILY SSF53756 3 344 6.28E-98 T 28-03-2018 AL549_RS22900 6e955f2d48c18b49d83bb855700e3782 352 Gene3D G3DSA:3.40.50.2000 165 346 1.6E-48 T 28-03-2018 AL549_RS22900 6e955f2d48c18b49d83bb855700e3782 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 326 8.9E-73 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AL549_RS22900 6e955f2d48c18b49d83bb855700e3782 352 Gene3D G3DSA:3.40.50.2000 1 149 1.6E-34 T 28-03-2018 AL549_RS08235 2475df50e040e9b102f05c3379f2836b 127 SUPERFAMILY SSF82649 1 125 9.94E-48 T 28-03-2018 AL549_RS08235 2475df50e040e9b102f05c3379f2836b 127 Gene3D G3DSA:3.90.1010.10 1 127 6.4E-51 T 28-03-2018 AL549_RS08235 2475df50e040e9b102f05c3379f2836b 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.3E-69 T 28-03-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AL549_RS08235 2475df50e040e9b102f05c3379f2836b 127 Pfam PF01592 NifU-like N terminal domain 2 125 1.3E-56 T 28-03-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AL549_RS22145 59f7314d0ec19eda8af3ce177e48d622 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 3.3E-77 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL549_RS22145 59f7314d0ec19eda8af3ce177e48d622 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 9.5E-75 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL549_RS22145 59f7314d0ec19eda8af3ce177e48d622 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 28-03-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 AL549_RS22145 59f7314d0ec19eda8af3ce177e48d622 724 SUPERFAMILY SSF52540 8 643 2.81E-180 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS22145 59f7314d0ec19eda8af3ce177e48d622 724 Gene3D G3DSA:3.40.50.300 421 672 2.4E-52 T 28-03-2018 AL549_RS22145 59f7314d0ec19eda8af3ce177e48d622 724 Gene3D G3DSA:3.40.50.300 148 283 3.3E-31 T 28-03-2018 AL549_RS22145 59f7314d0ec19eda8af3ce177e48d622 724 Gene3D G3DSA:3.40.50.300 6 147 1.3E-26 T 28-03-2018 AL549_RS22145 59f7314d0ec19eda8af3ce177e48d622 724 Gene3D G3DSA:3.40.50.300 284 385 7.9E-25 T 28-03-2018 AL549_RS22845 fecffbb4d423c9737f115b1fb61999c8 229 Gene3D G3DSA:3.90.550.10 1 229 1.6E-33 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS22845 fecffbb4d423c9737f115b1fb61999c8 229 SUPERFAMILY SSF53448 1 227 9.86E-55 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS22845 fecffbb4d423c9737f115b1fb61999c8 229 Pfam PF02348 Cytidylyltransferase 7 175 3.8E-17 T 28-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AL549_RS06980 dfb7cd2f66d29865bdfb80981fbfd317 826 SUPERFAMILY SSF52058 351 624 3.63E-22 T 28-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like AL549_RS06980 dfb7cd2f66d29865bdfb80981fbfd317 826 Gene3D G3DSA:2.40.50.70 119 160 0.002 T 28-03-2018 AL549_RS06980 dfb7cd2f66d29865bdfb80981fbfd317 826 Gene3D G3DSA:3.80.10.10 319 455 6.6E-9 T 28-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like AL549_RS06980 dfb7cd2f66d29865bdfb80981fbfd317 826 Gene3D G3DSA:3.80.10.10 456 621 1.0E-20 T 28-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like AL549_RS06980 dfb7cd2f66d29865bdfb80981fbfd317 826 Gene3D G3DSA:3.80.10.10 622 803 7.3E-14 T 28-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like AL549_RS06980 dfb7cd2f66d29865bdfb80981fbfd317 826 Gene3D G3DSA:3.40.1850.10 161 235 2.1E-10 T 28-03-2018 AL549_RS06980 dfb7cd2f66d29865bdfb80981fbfd317 826 Gene3D G3DSA:2.60.40.10 33 118 1.7E-6 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS06980 dfb7cd2f66d29865bdfb80981fbfd317 826 Gene3D G3DSA:2.60.40.10 236 318 2.6E-14 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS06980 dfb7cd2f66d29865bdfb80981fbfd317 826 SUPERFAMILY SSF52058 608 791 3.06E-16 T 28-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like AL549_RS19745 c6d2e0ffd901cab89e367b6bf0784c91 1295 Pfam PF13116 Protein of unknown function 508 794 1.5E-92 T 28-03-2018 IPR025263 Domain of unknown function DUF3971 AL549_RS19745 c6d2e0ffd901cab89e367b6bf0784c91 1295 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 8 1282 0.0 T 28-03-2018 IPR011836 Conserved hypothetical protein CHP02099 AL549_RS19745 c6d2e0ffd901cab89e367b6bf0784c91 1295 Pfam PF13502 AsmA-like C-terminal region 1032 1272 1.4E-57 T 28-03-2018 IPR032712 AsmA-like, C-terminal AL549_RS07145 8164c69c7edab7b439cce7869c149b68 206 SUPERFAMILY SSF51645 36 202 1.11E-23 T 28-03-2018 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL549_RS07145 8164c69c7edab7b439cce7869c149b68 206 Gene3D G3DSA:2.170.170.11 34 202 1.8E-40 T 28-03-2018 AL549_RS12260 a8cae9a77bb02bee20b82e514b070172 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 202 233 2.3E-9 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS12260 a8cae9a77bb02bee20b82e514b070172 256 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 207 235 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL549_RS12260 a8cae9a77bb02bee20b82e514b070172 256 Gene3D G3DSA:2.160.10.10 97 251 6.7E-32 T 28-03-2018 AL549_RS12260 a8cae9a77bb02bee20b82e514b070172 256 SUPERFAMILY SSF51161 93 252 2.88E-31 T 28-03-2018 IPR011004 Trimeric LpxA-like AL549_RS07045 72f5ebc2c42bc1707f7bf45a94dd9614 368 SMART SM00382 32 215 2.0E-20 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS07045 72f5ebc2c42bc1707f7bf45a94dd9614 368 Gene3D G3DSA:2.40.50.100 245 291 3.2E-5 T 28-03-2018 AL549_RS07045 72f5ebc2c42bc1707f7bf45a94dd9614 368 Pfam PF08402 TOBE domain 279 355 2.4E-5 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL549_RS07045 72f5ebc2c42bc1707f7bf45a94dd9614 368 Pfam PF00005 ABC transporter 23 165 4.8E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS07045 72f5ebc2c42bc1707f7bf45a94dd9614 368 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 5 358 7.3E-164 T 28-03-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 AL549_RS07045 72f5ebc2c42bc1707f7bf45a94dd9614 368 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS07045 72f5ebc2c42bc1707f7bf45a94dd9614 368 SUPERFAMILY SSF52540 8 247 5.99E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS07045 72f5ebc2c42bc1707f7bf45a94dd9614 368 Gene3D G3DSA:2.40.50.140 292 350 0.0037 T 28-03-2018 AL549_RS07045 72f5ebc2c42bc1707f7bf45a94dd9614 368 SUPERFAMILY SSF50331 240 357 2.31E-12 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL549_RS07045 72f5ebc2c42bc1707f7bf45a94dd9614 368 Gene3D G3DSA:3.40.50.300 1 244 2.7E-76 T 28-03-2018 AL549_RS19430 7aa4597977045c93894851d71402fa74 200 Pfam PF01725 Ham1 family 4 191 5.4E-57 T 28-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 AL549_RS19430 7aa4597977045c93894851d71402fa74 200 SUPERFAMILY SSF52972 1 196 1.44E-73 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL549_RS19430 7aa4597977045c93894851d71402fa74 200 Gene3D G3DSA:3.90.950.10 1 199 9.6E-80 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL549_RS19430 7aa4597977045c93894851d71402fa74 200 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 50.778 T 28-03-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 AL549_RS19430 7aa4597977045c93894851d71402fa74 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 2.0E-64 T 28-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 AL549_RS23295 bde15d49023fce571a3c8de05fd9faaa 574 Pfam PF03600 Citrate transporter 32 518 7.2E-25 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AL549_RS23295 bde15d49023fce571a3c8de05fd9faaa 574 SUPERFAMILY SSF116726 290 349 1.57E-13 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS23295 bde15d49023fce571a3c8de05fd9faaa 574 Gene3D G3DSA:3.30.70.1450 205 286 1.6E-15 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS23295 bde15d49023fce571a3c8de05fd9faaa 574 Gene3D G3DSA:3.30.70.1450 289 363 2.4E-12 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS23295 bde15d49023fce571a3c8de05fd9faaa 574 SUPERFAMILY SSF116726 206 283 1.31E-16 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS23295 bde15d49023fce571a3c8de05fd9faaa 574 Pfam PF02080 TrkA-C domain 209 276 8.6E-12 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS23295 bde15d49023fce571a3c8de05fd9faaa 574 Pfam PF02080 TrkA-C domain 293 349 1.1E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 SUPERFAMILY SSF82714 731 815 1.83E-9 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 Gene3D G3DSA:3.30.70.1430 569 681 4.4E-20 T 28-03-2018 AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 Gene3D G3DSA:1.20.1640.10 864 1047 2.8E-32 T 28-03-2018 AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 SUPERFAMILY SSF82693 567 681 1.15E-13 T 28-03-2018 AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 SUPERFAMILY SSF82693 149 191 1.73E-8 T 28-03-2018 AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 SUPERFAMILY SSF82693 278 336 1.73E-8 T 28-03-2018 AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 Gene3D G3DSA:3.30.2090.10 191 277 2.1E-15 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 Gene3D G3DSA:1.20.1640.10 293 517 1.0E-35 T 28-03-2018 AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 SUPERFAMILY SSF82866 305 503 9.68E-38 T 28-03-2018 AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 Gene3D G3DSA:3.30.2090.10 729 817 2.8E-11 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 Pfam PF00873 AcrB/AcrD/AcrF family 14 1042 1.9E-158 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 SUPERFAMILY SSF82693 47 138 3.84E-19 T 28-03-2018 AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 SUPERFAMILY SSF82714 194 275 1.16E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 Gene3D G3DSA:3.30.70.1430 47 150 6.9E-22 T 28-03-2018 AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 6.6E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 PRINTS PR00702 Acriflavin resistance protein family signature 45 63 6.6E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 PRINTS PR00702 Acriflavin resistance protein family signature 398 422 6.6E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 PRINTS PR00702 Acriflavin resistance protein family signature 477 500 6.6E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 PRINTS PR00702 Acriflavin resistance protein family signature 370 391 6.6E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 PRINTS PR00702 Acriflavin resistance protein family signature 17 41 6.6E-26 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS05555 c69948745f719ae628cc28d0da7846d5 1049 SUPERFAMILY SSF82866 820 1047 5.1E-42 T 28-03-2018 AL549_RS08060 cfca6b7d9c5f18374d5869f0702089a8 84 SUPERFAMILY SSF54862 4 72 3.35E-17 T 28-03-2018 AL549_RS08060 cfca6b7d9c5f18374d5869f0702089a8 84 Gene3D G3DSA:3.30.70.20 2 82 4.8E-15 T 28-03-2018 AL549_RS08060 cfca6b7d9c5f18374d5869f0702089a8 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS08060 cfca6b7d9c5f18374d5869f0702089a8 84 Pfam PF00037 4Fe-4S binding domain 5 25 6.6E-6 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS09010 b09446c7458d140222c53fe241b126d7 291 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 281 2.5E-81 T 28-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AL549_RS09010 b09446c7458d140222c53fe241b126d7 291 Gene3D G3DSA:1.10.8.10 5 90 9.6E-26 T 28-03-2018 AL549_RS09010 b09446c7458d140222c53fe241b126d7 291 Gene3D G3DSA:3.40.50.150 91 283 3.1E-41 T 28-03-2018 AL549_RS09010 b09446c7458d140222c53fe241b126d7 291 SUPERFAMILY SSF53335 9 279 9.39E-59 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS09010 b09446c7458d140222c53fe241b126d7 291 Pfam PF13847 Methyltransferase domain 116 247 2.4E-16 T 28-03-2018 IPR025714 Methyltransferase domain AL549_RS09010 b09446c7458d140222c53fe241b126d7 291 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL549_RS09010 b09446c7458d140222c53fe241b126d7 291 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 278 7.2E-93 T 28-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AL549_RS09010 b09446c7458d140222c53fe241b126d7 291 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 282 45.001 T 28-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AL549_RS02490 22ac8fa517a3159271744fb8df837f3a 229 Gene3D G3DSA:2.40.33.20 2 229 3.2E-48 T 28-03-2018 AL549_RS02490 22ac8fa517a3159271744fb8df837f3a 229 Pfam PF03473 MOSC domain 49 163 9.6E-21 T 28-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AL549_RS02490 22ac8fa517a3159271744fb8df837f3a 229 SUPERFAMILY SSF50800 3 227 1.67E-70 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain AL549_RS02490 22ac8fa517a3159271744fb8df837f3a 229 Pfam PF03475 3-alpha domain 173 215 2.9E-11 T 28-03-2018 IPR005163 3-alpha domain AL549_RS19315 7247b56a2b56e6266c2889136bd89390 206 Pfam PF01810 LysE type translocator 15 200 1.9E-42 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL549_RS09630 278e387feb445fbb83f80ad00864e01c 314 Gene3D G3DSA:3.40.190.10 88 177 1.2E-15 T 28-03-2018 AL549_RS09630 278e387feb445fbb83f80ad00864e01c 314 Pfam PF03466 LysR substrate binding domain 90 295 2.7E-43 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS09630 278e387feb445fbb83f80ad00864e01c 314 SUPERFAMILY SSF53850 90 298 1.23E-46 T 28-03-2018 AL549_RS09630 278e387feb445fbb83f80ad00864e01c 314 SUPERFAMILY SSF46785 8 90 5.59E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS09630 278e387feb445fbb83f80ad00864e01c 314 Gene3D G3DSA:1.10.10.10 5 86 4.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS09630 278e387feb445fbb83f80ad00864e01c 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.1E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS09630 278e387feb445fbb83f80ad00864e01c 314 Gene3D G3DSA:3.40.190.10 178 266 6.9E-27 T 28-03-2018 AL549_RS17970 9b97581080ea435784fa8995777ebda1 846 Gene3D G3DSA:2.10.10.20 27 72 1.6E-11 T 28-03-2018 AL549_RS17970 9b97581080ea435784fa8995777ebda1 846 ProSitePatterns PS01095 Chitinases family 18 active site. 637 645 - T 28-03-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL549_RS17970 9b97581080ea435784fa8995777ebda1 846 SUPERFAMILY SSF51055 19 78 8.63E-13 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS17970 9b97581080ea435784fa8995777ebda1 846 SMART SM00495 277 326 0.0034 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS17970 9b97581080ea435784fa8995777ebda1 846 SMART SM00495 28 74 1.1E-10 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS17970 9b97581080ea435784fa8995777ebda1 846 SUPERFAMILY SSF51445 522 833 7.96E-49 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS17970 9b97581080ea435784fa8995777ebda1 846 Gene3D G3DSA:2.10.10.20 262 331 1.1E-6 T 28-03-2018 AL549_RS17970 9b97581080ea435784fa8995777ebda1 846 Pfam PF00704 Glycosyl hydrolases family 18 525 825 4.5E-26 T 28-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AL549_RS17970 9b97581080ea435784fa8995777ebda1 846 Gene3D G3DSA:2.60.40.10 371 413 1.3E-4 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS17970 9b97581080ea435784fa8995777ebda1 846 SMART SM00636 523 825 2.2E-4 T 28-03-2018 IPR011583 Chitinase II GO:0008061 AL549_RS17970 9b97581080ea435784fa8995777ebda1 846 Gene3D G3DSA:3.20.20.80 518 846 2.1E-40 T 28-03-2018 AL549_RS17970 9b97581080ea435784fa8995777ebda1 846 Gene3D G3DSA:2.40.50.70 414 465 3.2E-9 T 28-03-2018 AL549_RS17970 9b97581080ea435784fa8995777ebda1 846 Gene3D G3DSA:2.40.50.70 76 123 1.7E-14 T 28-03-2018 AL549_RS17970 9b97581080ea435784fa8995777ebda1 846 Gene3D G3DSA:2.40.50.70 332 370 6.8E-13 T 28-03-2018 AL549_RS17970 9b97581080ea435784fa8995777ebda1 846 Gene3D G3DSA:2.40.50.70 143 217 7.9E-11 T 28-03-2018 AL549_RS11440 a473d27929276a4db2ae8e6328d6f475 92 Gene3D G3DSA:2.40.240.10 1 92 7.1E-28 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL549_RS11440 a473d27929276a4db2ae8e6328d6f475 92 SUPERFAMILY SSF50715 1 92 6.1E-28 T 28-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL549_RS11440 a473d27929276a4db2ae8e6328d6f475 92 Pfam PF01386 Ribosomal L25p family 4 89 2.0E-22 T 28-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AL549_RS11440 a473d27929276a4db2ae8e6328d6f475 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.282 T 28-03-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AL549_RS11440 a473d27929276a4db2ae8e6328d6f475 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 6.0E-48 T 28-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AL549_RS19815 3972164dab5104d9f288daf2d9932dc6 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 1.5E-9 T 28-03-2018 IPR003004 GspF/PilC family AL549_RS19815 3972164dab5104d9f288daf2d9932dc6 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 1.5E-9 T 28-03-2018 IPR003004 GspF/PilC family AL549_RS19815 3972164dab5104d9f288daf2d9932dc6 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 1.5E-9 T 28-03-2018 IPR003004 GspF/PilC family AL549_RS19815 3972164dab5104d9f288daf2d9932dc6 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 1.5E-9 T 28-03-2018 IPR003004 GspF/PilC family AL549_RS19815 3972164dab5104d9f288daf2d9932dc6 406 Gene3D G3DSA:3.30.70.1120 307 374 6.0E-4 T 28-03-2018 AL549_RS19815 3972164dab5104d9f288daf2d9932dc6 406 Gene3D G3DSA:3.30.70.1120 95 170 6.5E-7 T 28-03-2018 AL549_RS19815 3972164dab5104d9f288daf2d9932dc6 406 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 9.0E-27 T 28-03-2018 IPR018076 Type II secretion system F domain AL549_RS19815 3972164dab5104d9f288daf2d9932dc6 406 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 4.3E-30 T 28-03-2018 IPR018076 Type II secretion system F domain AL549_RS19755 32cc0ed60a75969ce27b1b6e08976549 186 Pfam PF02545 Maf-like protein 3 184 1.9E-61 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AL549_RS19755 32cc0ed60a75969ce27b1b6e08976549 186 SUPERFAMILY SSF52972 1 184 2.09E-63 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL549_RS19755 32cc0ed60a75969ce27b1b6e08976549 186 Gene3D G3DSA:3.90.950.10 1 186 1.6E-70 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL549_RS19755 32cc0ed60a75969ce27b1b6e08976549 186 PIRSF PIRSF006305 1 186 2.8E-58 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AL549_RS19755 32cc0ed60a75969ce27b1b6e08976549 186 Hamap MF_00528 Septum formation protein Maf [maf]. 3 186 29.879 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AL549_RS19755 32cc0ed60a75969ce27b1b6e08976549 186 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 182 2.4E-54 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AL549_RS02430 9fecc572988eaa2734effbaac024db8a 173 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 157 4.4E-29 T 28-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL549_RS16680 b56f83ceafe1b52c4e8deef4f176c1bc 234 SUPERFAMILY SSF55120 55 233 1.76E-44 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS16680 b56f83ceafe1b52c4e8deef4f176c1bc 234 Gene3D G3DSA:3.30.70.1560 135 218 4.5E-25 T 28-03-2018 AL549_RS16680 b56f83ceafe1b52c4e8deef4f176c1bc 234 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 92 106 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL549_RS16680 b56f83ceafe1b52c4e8deef4f176c1bc 234 Pfam PF00849 RNA pseudouridylate synthase 57 201 4.9E-16 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS16680 b56f83ceafe1b52c4e8deef4f176c1bc 234 Gene3D G3DSA:3.30.70.580 45 134 6.8E-17 T 28-03-2018 AL549_RS16680 b56f83ceafe1b52c4e8deef4f176c1bc 234 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 61 231 1.2E-58 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL549_RS07615 f98d8b6f81b15423f49a56e661c6178a 259 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 5.7E-40 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL549_RS17210 1935ef4619bd21e44fc152752ce0f6d2 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 3.8E-31 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL549_RS17210 1935ef4619bd21e44fc152752ce0f6d2 337 Gene3D G3DSA:3.30.360.10 144 315 2.1E-72 T 28-03-2018 AL549_RS17210 1935ef4619bd21e44fc152752ce0f6d2 337 SMART SM00859 6 121 1.5E-41 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL549_RS17210 1935ef4619bd21e44fc152752ce0f6d2 337 Gene3D G3DSA:3.40.50.720 1 143 5.9E-32 T 28-03-2018 AL549_RS17210 1935ef4619bd21e44fc152752ce0f6d2 337 PIRSF PIRSF000148 4 337 1.2E-131 T 28-03-2018 AL549_RS17210 1935ef4619bd21e44fc152752ce0f6d2 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 28-03-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS17210 1935ef4619bd21e44fc152752ce0f6d2 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.373 T 28-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS17210 1935ef4619bd21e44fc152752ce0f6d2 337 SUPERFAMILY SSF51735 5 159 5.15E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS17210 1935ef4619bd21e44fc152752ce0f6d2 337 SUPERFAMILY SSF55347 131 320 3.27E-77 T 28-03-2018 AL549_RS17210 1935ef4619bd21e44fc152752ce0f6d2 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 2.5E-127 T 28-03-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS17210 1935ef4619bd21e44fc152752ce0f6d2 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 6.4E-61 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 Pfam PF03476 MOSC N-terminal beta barrel domain 4 117 1.1E-30 T 28-03-2018 IPR005303 MOSC, N-terminal beta barrel AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 PRINTS PR00406 Cytochrome B5 reductase signature 425 436 1.5E-8 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 PRINTS PR00406 Cytochrome B5 reductase signature 478 486 1.5E-8 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 PRINTS PR00406 Cytochrome B5 reductase signature 328 335 1.5E-8 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 PRINTS PR00406 Cytochrome B5 reductase signature 365 379 1.5E-8 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 PRINTS PR00406 Cytochrome B5 reductase signature 388 407 1.5E-8 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 Gene3D G3DSA:2.40.33.20 1 276 2.0E-51 T 28-03-2018 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 528 597 1.4E-13 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 Gene3D G3DSA:2.40.30.10 278 378 9.0E-23 T 28-03-2018 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 555 563 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 Gene3D G3DSA:3.10.20.30 509 606 1.5E-24 T 28-03-2018 IPR012675 Beta-grasp domain AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 SUPERFAMILY SSF141673 6 133 4.58E-30 T 28-03-2018 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 Pfam PF03473 MOSC domain 139 262 1.7E-29 T 28-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 Pfam PF00970 Oxidoreductase FAD-binding domain 283 378 1.2E-14 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 SUPERFAMILY SSF63380 279 381 1.08E-26 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 SUPERFAMILY SSF50800 4 52 4.03E-16 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 SUPERFAMILY SSF50800 148 264 4.03E-16 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 Gene3D G3DSA:3.40.50.80 379 508 3.6E-30 T 28-03-2018 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 SUPERFAMILY SSF52343 368 508 6.42E-36 T 28-03-2018 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 388 407 1.5E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 478 486 1.5E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 309 319 1.5E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 328 335 1.5E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 425 436 1.5E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 SUPERFAMILY SSF54292 501 603 3.01E-28 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL549_RS00035 4c9a4e29f4451757b5b2d935feb5159e 606 Pfam PF00175 Oxidoreductase NAD-binding domain 389 492 2.9E-16 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL549_RS07300 1d57172fa42a781f4bacab19e248af6c 459 SMART SM00729 64 287 9.6E-38 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL549_RS07300 1d57172fa42a781f4bacab19e248af6c 459 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 25 444 2.5E-180 T 28-03-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW AL549_RS07300 1d57172fa42a781f4bacab19e248af6c 459 Gene3D G3DSA:3.20.20.70 42 381 2.1E-26 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS07300 1d57172fa42a781f4bacab19e248af6c 459 SUPERFAMILY SSF102114 61 441 1.73E-81 T 28-03-2018 AL549_RS07300 1d57172fa42a781f4bacab19e248af6c 459 Pfam PF04055 Radical SAM superfamily 69 235 9.6E-13 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS04220 154a3c1f4069dfdf87d065f0bca3a891 259 Pfam PF00520 Ion transport protein 21 226 3.3E-23 T 28-03-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 AL549_RS04220 154a3c1f4069dfdf87d065f0bca3a891 259 SUPERFAMILY SSF81324 21 225 1.96E-20 T 28-03-2018 AL549_RS04220 154a3c1f4069dfdf87d065f0bca3a891 259 Gene3D G3DSA:1.10.287.70 12 227 2.7E-24 T 28-03-2018 AL549_RS12180 7622beb74f258a8ebef385690877e211 539 SMART SM00387 418 537 2.5E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS12180 7622beb74f258a8ebef385690877e211 539 Pfam PF00989 PAS fold 215 276 9.5E-7 T 28-03-2018 IPR013767 PAS fold GO:0006355 AL549_RS12180 7622beb74f258a8ebef385690877e211 539 SUPERFAMILY SSF103190 40 168 3.85E-34 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL549_RS12180 7622beb74f258a8ebef385690877e211 539 Gene3D G3DSA:3.30.565.10 392 539 9.4E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS12180 7622beb74f258a8ebef385690877e211 539 SUPERFAMILY SSF55890 322 405 6.15E-10 T 28-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 AL549_RS12180 7622beb74f258a8ebef385690877e211 539 SUPERFAMILY SSF55785 215 306 4.34E-12 T 28-03-2018 IPR000014 PAS domain AL549_RS12180 7622beb74f258a8ebef385690877e211 539 Gene3D G3DSA:1.10.287.130 315 375 3.0E-16 T 28-03-2018 AL549_RS12180 7622beb74f258a8ebef385690877e211 539 Gene3D G3DSA:3.30.450.20 31 164 8.3E-26 T 28-03-2018 AL549_RS12180 7622beb74f258a8ebef385690877e211 539 SUPERFAMILY SSF55874 388 534 9.69E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS12180 7622beb74f258a8ebef385690877e211 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 422 536 3.4E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS12180 7622beb74f258a8ebef385690877e211 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 5.7E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS12180 7622beb74f258a8ebef385690877e211 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 5.7E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS12180 7622beb74f258a8ebef385690877e211 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 5.7E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS12180 7622beb74f258a8ebef385690877e211 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 369 7.2E-9 T 28-03-2018 AL549_RS12180 7622beb74f258a8ebef385690877e211 539 Pfam PF17203 Single cache domain 3 37 167 2.6E-19 T 28-03-2018 IPR033463 Single cache domain 3 AL549_RS12180 7622beb74f258a8ebef385690877e211 539 SMART SM00091 213 279 7.2E-4 T 28-03-2018 IPR000014 PAS domain AL549_RS12180 7622beb74f258a8ebef385690877e211 539 Gene3D G3DSA:3.30.450.20 215 314 3.7E-11 T 28-03-2018 AL549_RS08835 0ec8173a953cb3ea82e5380600f372c5 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.66 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS08835 0ec8173a953cb3ea82e5380600f372c5 156 Gene3D G3DSA:3.40.1280.10 1 155 4.1E-52 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL549_RS08835 0ec8173a953cb3ea82e5380600f372c5 156 PIRSF PIRSF004505 1 155 2.2E-43 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS08835 0ec8173a953cb3ea82e5380600f372c5 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 1.2E-78 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS08835 0ec8173a953cb3ea82e5380600f372c5 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.0E-48 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS08835 0ec8173a953cb3ea82e5380600f372c5 156 SUPERFAMILY SSF75217 1 154 2.09E-50 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AL549_RS16605 9383b50acb6b5d9ccd04544eec013073 264 Gene3D G3DSA:3.40.50.1820 194 263 3.3E-9 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS16605 9383b50acb6b5d9ccd04544eec013073 264 SUPERFAMILY SSF53474 12 261 9.49E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS16605 9383b50acb6b5d9ccd04544eec013073 264 Pfam PF00561 alpha/beta hydrolase fold 19 121 6.1E-22 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS16605 9383b50acb6b5d9ccd04544eec013073 264 PRINTS PR00412 Epoxide hydrolase signature 237 259 3.4E-6 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL549_RS16605 9383b50acb6b5d9ccd04544eec013073 264 PRINTS PR00412 Epoxide hydrolase signature 205 221 3.4E-6 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL549_RS16605 9383b50acb6b5d9ccd04544eec013073 264 PRINTS PR00412 Epoxide hydrolase signature 24 42 3.4E-6 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL549_RS16605 9383b50acb6b5d9ccd04544eec013073 264 Gene3D G3DSA:3.40.50.1820 13 193 5.9E-23 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS01175 4d1419f774f56b2873466e37ca7b941e 374 SUPERFAMILY SSF46894 298 369 1.26E-9 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS01175 4d1419f774f56b2873466e37ca7b941e 374 SMART SM00421 310 367 4.6E-4 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS01175 4d1419f774f56b2873466e37ca7b941e 374 Gene3D G3DSA:1.10.10.10 129 374 1.7E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21030 d9ed251740cad5680eda949e535ee9ae 446 Pfam PF13091 PLD-like domain 34 146 2.4E-7 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL549_RS21030 d9ed251740cad5680eda949e535ee9ae 446 Pfam PF13091 PLD-like domain 252 402 1.2E-24 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL549_RS21030 d9ed251740cad5680eda949e535ee9ae 446 SMART SM00155 347 374 0.0047 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL549_RS21030 d9ed251740cad5680eda949e535ee9ae 446 SMART SM00155 126 152 5.3E-4 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL549_RS21030 d9ed251740cad5680eda949e535ee9ae 446 Gene3D G3DSA:3.30.870.10 11 233 3.0E-19 T 28-03-2018 AL549_RS21030 d9ed251740cad5680eda949e535ee9ae 446 Gene3D G3DSA:3.30.870.10 243 413 1.5E-24 T 28-03-2018 AL549_RS21030 d9ed251740cad5680eda949e535ee9ae 446 SUPERFAMILY SSF56024 247 392 9.42E-26 T 28-03-2018 AL549_RS21030 d9ed251740cad5680eda949e535ee9ae 446 SUPERFAMILY SSF56024 8 179 1.88E-27 T 28-03-2018 AL549_RS21030 d9ed251740cad5680eda949e535ee9ae 446 PIRSF PIRSF000850 2 446 1.6E-213 T 28-03-2018 AL549_RS07110 0347205b7a4850c301f82930f0b0ecc7 307 Gene3D G3DSA:3.40.190.10 89 176 3.5E-18 T 28-03-2018 AL549_RS07110 0347205b7a4850c301f82930f0b0ecc7 307 Gene3D G3DSA:3.40.190.10 177 264 4.8E-27 T 28-03-2018 AL549_RS07110 0347205b7a4850c301f82930f0b0ecc7 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.8E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS07110 0347205b7a4850c301f82930f0b0ecc7 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS07110 0347205b7a4850c301f82930f0b0ecc7 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS07110 0347205b7a4850c301f82930f0b0ecc7 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS07110 0347205b7a4850c301f82930f0b0ecc7 307 Pfam PF03466 LysR substrate binding domain 89 293 1.0E-50 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS07110 0347205b7a4850c301f82930f0b0ecc7 307 SUPERFAMILY SSF46785 5 113 1.77E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS07110 0347205b7a4850c301f82930f0b0ecc7 307 SUPERFAMILY SSF53850 89 295 9.0E-53 T 28-03-2018 AL549_RS07110 0347205b7a4850c301f82930f0b0ecc7 307 Gene3D G3DSA:1.10.10.10 2 85 7.3E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS17250 0ef889504fda36e2a382a148780e8d12 310 PIRSF PIRSF037167 2 307 4.2E-148 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AL549_RS17250 0ef889504fda36e2a382a148780e8d12 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 302 1.1E-95 T 28-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AL549_RS17250 0ef889504fda36e2a382a148780e8d12 310 Gene3D G3DSA:3.40.50.150 102 274 8.6E-34 T 28-03-2018 AL549_RS17250 0ef889504fda36e2a382a148780e8d12 310 Gene3D G3DSA:1.10.8.10 15 101 2.5E-9 T 28-03-2018 AL549_RS17250 0ef889504fda36e2a382a148780e8d12 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 1.2E-136 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AL549_RS17250 0ef889504fda36e2a382a148780e8d12 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL549_RS17250 0ef889504fda36e2a382a148780e8d12 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.635 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AL549_RS17250 0ef889504fda36e2a382a148780e8d12 310 SUPERFAMILY SSF53335 16 293 1.33E-47 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS17250 0ef889504fda36e2a382a148780e8d12 310 Pfam PF05175 Methyltransferase small domain 135 217 2.4E-17 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AL549_RS23195 c616a9c7dd2fbae50df050b059a3a974 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 4.0E-69 T 28-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL549_RS23195 c616a9c7dd2fbae50df050b059a3a974 167 SUPERFAMILY SSF54768 8 76 4.08E-24 T 28-03-2018 AL549_RS23195 c616a9c7dd2fbae50df050b059a3a974 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 28-03-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site AL549_RS23195 c616a9c7dd2fbae50df050b059a3a974 167 Gene3D G3DSA:3.30.230.10 77 167 7.4E-32 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL549_RS23195 c616a9c7dd2fbae50df050b059a3a974 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.696 T 28-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL549_RS23195 c616a9c7dd2fbae50df050b059a3a974 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 1.9E-29 T 28-03-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AL549_RS23195 c616a9c7dd2fbae50df050b059a3a974 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 2.7E-29 T 28-03-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AL549_RS23195 c616a9c7dd2fbae50df050b059a3a974 167 Gene3D G3DSA:3.30.160.20 11 73 8.0E-28 T 28-03-2018 AL549_RS23195 c616a9c7dd2fbae50df050b059a3a974 167 SUPERFAMILY SSF54211 80 159 6.57E-27 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS00430 018262457340a35ecc7853df171910a2 1217 Pfam PF00512 His Kinase A (phospho-acceptor) domain 673 738 1.5E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 Gene3D G3DSA:3.40.190.10 148 258 0.052 T 28-03-2018 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 Gene3D G3DSA:3.40.50.2300 985 1108 1.8E-28 T 28-03-2018 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 SUPERFAMILY SSF47226 1119 1216 2.36E-14 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 Gene3D G3DSA:1.10.287.130 678 732 6.5E-15 T 28-03-2018 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 SUPERFAMILY SSF53850 60 240 1.96E-23 T 28-03-2018 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 PRINTS PR00344 Bacterial sensor protein C-terminal signature 821 835 5.7E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 PRINTS PR00344 Bacterial sensor protein C-terminal signature 880 893 5.7E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 PRINTS PR00344 Bacterial sensor protein C-terminal signature 839 849 5.7E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 PRINTS PR00344 Bacterial sensor protein C-terminal signature 856 874 5.7E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 Gene3D G3DSA:3.30.450.20 542 677 2.4E-11 T 28-03-2018 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 Pfam PF01627 Hpt domain 1133 1206 6.5E-9 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 SUPERFAMILY SSF47384 659 739 1.0E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 SMART SM00062 40 251 0.0029 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS00430 018262457340a35ecc7853df171910a2 1217 SMART SM00062 276 491 0.0091 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS00430 018262457340a35ecc7853df171910a2 1217 SUPERFAMILY SSF55874 727 897 9.3E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS00430 018262457340a35ecc7853df171910a2 1217 Pfam PF00072 Response regulator receiver domain 996 1106 2.0E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 SUPERFAMILY SSF53850 273 492 5.32E-15 T 28-03-2018 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 SUPERFAMILY SSF52172 995 1121 1.07E-29 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS00430 018262457340a35ecc7853df171910a2 1217 Gene3D G3DSA:1.20.120.160 1109 1217 1.9E-10 T 28-03-2018 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 SMART SM00388 673 738 3.6E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 Gene3D G3DSA:3.40.190.10 261 488 2.1E-8 T 28-03-2018 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 SMART SM00448 994 1108 1.5E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 786 895 1.9E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS00430 018262457340a35ecc7853df171910a2 1217 Gene3D G3DSA:3.30.565.10 733 896 6.6E-44 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS00430 018262457340a35ecc7853df171910a2 1217 Gene3D G3DSA:3.40.190.10 18 147 5.1E-10 T 28-03-2018 AL549_RS00430 018262457340a35ecc7853df171910a2 1217 SMART SM00387 785 896 1.2E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS00430 018262457340a35ecc7853df171910a2 1217 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 60 240 3.9E-17 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS21955 d9f170cc55e0bef34f8c3ae4db94802f 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 1.9E-30 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS21955 d9f170cc55e0bef34f8c3ae4db94802f 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 1.9E-30 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS21955 d9f170cc55e0bef34f8c3ae4db94802f 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 1.9E-30 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS21955 d9f170cc55e0bef34f8c3ae4db94802f 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 1.9E-30 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS21955 d9f170cc55e0bef34f8c3ae4db94802f 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 1.9E-30 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS21955 d9f170cc55e0bef34f8c3ae4db94802f 426 Gene3D G3DSA:3.30.70.1170 170 227 5.9E-17 T 28-03-2018 AL549_RS21955 d9f170cc55e0bef34f8c3ae4db94802f 426 Gene3D G3DSA:1.10.287.730 143 168 2.4E-11 T 28-03-2018 AL549_RS21955 d9f170cc55e0bef34f8c3ae4db94802f 426 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 1.1E-68 T 28-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS21955 d9f170cc55e0bef34f8c3ae4db94802f 426 Gene3D G3DSA:3.40.50.150 228 426 1.1E-56 T 28-03-2018 AL549_RS21955 d9f170cc55e0bef34f8c3ae4db94802f 426 Pfam PF01029 NusB family 1 123 4.2E-24 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL549_RS21955 d9f170cc55e0bef34f8c3ae4db94802f 426 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 426 1.3E-152 T 28-03-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS21955 d9f170cc55e0bef34f8c3ae4db94802f 426 SUPERFAMILY SSF48013 1 146 2.13E-36 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL549_RS21955 d9f170cc55e0bef34f8c3ae4db94802f 426 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 28-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS21955 d9f170cc55e0bef34f8c3ae4db94802f 426 SUPERFAMILY SSF53335 139 424 2.43E-78 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS21955 d9f170cc55e0bef34f8c3ae4db94802f 426 Gene3D G3DSA:1.10.940.10 1 142 2.0E-30 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL549_RS10675 515d7e9b6d9f97b9e0bdec57181c7625 1036 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 8.7E-171 T 28-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AL549_RS10675 515d7e9b6d9f97b9e0bdec57181c7625 1036 Pfam PF00575 S1 RNA binding domain 37 118 5.0E-14 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL549_RS10675 515d7e9b6d9f97b9e0bdec57181c7625 1036 SUPERFAMILY SSF50249 40 124 8.0E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS10675 515d7e9b6d9f97b9e0bdec57181c7625 1036 SMART SM00316 37 119 1.8E-10 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL549_RS10675 515d7e9b6d9f97b9e0bdec57181c7625 1036 Pfam PF10150 Ribonuclease E/G family 121 390 5.2E-95 T 28-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AL549_RS10675 515d7e9b6d9f97b9e0bdec57181c7625 1036 Hamap MF_00970 Ribonuclease E [rne]. 1 1023 35.557 T 28-03-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AL549_RS10675 515d7e9b6d9f97b9e0bdec57181c7625 1036 Gene3D G3DSA:2.40.50.140 33 124 4.3E-30 T 28-03-2018 AL549_RS01460 7c56f06236f822d6ea500cd0b1ff2e1d 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 8.5E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS01460 7c56f06236f822d6ea500cd0b1ff2e1d 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 8.5E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS01460 7c56f06236f822d6ea500cd0b1ff2e1d 334 SUPERFAMILY SSF53822 61 329 1.67E-86 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS01460 7c56f06236f822d6ea500cd0b1ff2e1d 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-16 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS01460 7c56f06236f822d6ea500cd0b1ff2e1d 334 Pfam PF13377 Periplasmic binding protein-like domain 168 328 5.8E-37 T 28-03-2018 AL549_RS01460 7c56f06236f822d6ea500cd0b1ff2e1d 334 Gene3D G3DSA:3.40.50.2300 55 174 2.2E-37 T 28-03-2018 AL549_RS01460 7c56f06236f822d6ea500cd0b1ff2e1d 334 Gene3D G3DSA:3.40.50.2300 175 312 1.2E-44 T 28-03-2018 AL549_RS01460 7c56f06236f822d6ea500cd0b1ff2e1d 334 SMART SM00354 1 71 1.1E-26 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS01460 7c56f06236f822d6ea500cd0b1ff2e1d 334 SUPERFAMILY SSF47413 2 59 3.07E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS01460 7c56f06236f822d6ea500cd0b1ff2e1d 334 Gene3D G3DSA:1.10.260.40 2 54 5.2E-21 T 28-03-2018 AL549_RS07260 769f021ebb4ac2bfd69419dcf50ef0e3 622 Pfam PF02743 Cache domain 34 254 1.2E-31 T 28-03-2018 IPR033479 Double Cache domain 1 AL549_RS07260 769f021ebb4ac2bfd69419dcf50ef0e3 622 Gene3D G3DSA:1.10.287.950 384 593 3.1E-51 T 28-03-2018 AL549_RS07260 769f021ebb4ac2bfd69419dcf50ef0e3 622 Gene3D G3DSA:1.10.287.950 289 383 4.8E-5 T 28-03-2018 AL549_RS07260 769f021ebb4ac2bfd69419dcf50ef0e3 622 SUPERFAMILY SSF103190 87 183 1.1E-18 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL549_RS07260 769f021ebb4ac2bfd69419dcf50ef0e3 622 Gene3D G3DSA:3.30.450.20 159 270 5.0E-30 T 28-03-2018 AL549_RS07260 769f021ebb4ac2bfd69419dcf50ef0e3 622 Gene3D G3DSA:3.30.450.20 62 158 1.6E-20 T 28-03-2018 AL549_RS07260 769f021ebb4ac2bfd69419dcf50ef0e3 622 SMART SM00283 360 621 1.1E-74 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS07260 769f021ebb4ac2bfd69419dcf50ef0e3 622 SUPERFAMILY SSF58104 313 620 9.42E-75 T 28-03-2018 AL549_RS07260 769f021ebb4ac2bfd69419dcf50ef0e3 622 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 588 7.2E-45 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS07260 769f021ebb4ac2bfd69419dcf50ef0e3 622 SMART SM00304 373 440 41.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS07260 769f021ebb4ac2bfd69419dcf50ef0e3 622 SMART SM00304 291 345 5.7E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS07260 769f021ebb4ac2bfd69419dcf50ef0e3 622 Pfam PF00672 HAMP domain 291 342 9.0E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS23215 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23215 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 9.4E-19 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23215 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 28-03-2018 AL549_RS23215 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23215 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23215 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS06845 bd43207de19c08b3167792f27ec4a673 67 Gene3D G3DSA:1.10.287.700 21 67 4.2E-4 T 28-03-2018 AL549_RS22565 bbc41f6343dbf94158c5f7230dea2c05 774 SMART SM00732 326 424 1.2E-40 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AL549_RS22565 bbc41f6343dbf94158c5f7230dea2c05 774 Pfam PF09371 Tex-like protein N-terminal domain 9 193 8.5E-71 T 28-03-2018 IPR018974 Tex-like protein, N-terminal AL549_RS22565 bbc41f6343dbf94158c5f7230dea2c05 774 SUPERFAMILY SSF53098 322 469 4.02E-53 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS22565 bbc41f6343dbf94158c5f7230dea2c05 774 Pfam PF00575 S1 RNA binding domain 648 720 2.3E-21 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL549_RS22565 bbc41f6343dbf94158c5f7230dea2c05 774 Gene3D G3DSA:1.10.10.650 2 101 1.6E-34 T 28-03-2018 IPR023319 Tex-like protein, HTH domain AL549_RS22565 bbc41f6343dbf94158c5f7230dea2c05 774 Gene3D G3DSA:2.40.50.140 652 753 2.9E-26 T 28-03-2018 AL549_RS22565 bbc41f6343dbf94158c5f7230dea2c05 774 Gene3D G3DSA:1.10.3500.10 359 498 1.9E-41 T 28-03-2018 IPR023323 Tex-like domain AL549_RS22565 bbc41f6343dbf94158c5f7230dea2c05 774 Gene3D G3DSA:1.10.150.310 499 630 2.6E-42 T 28-03-2018 AL549_RS22565 bbc41f6343dbf94158c5f7230dea2c05 774 SUPERFAMILY SSF47781 470 557 1.33E-27 T 28-03-2018 IPR010994 RuvA domain 2-like AL549_RS22565 bbc41f6343dbf94158c5f7230dea2c05 774 Pfam PF16921 Tex protein YqgF-like domain 327 451 1.8E-56 T 28-03-2018 IPR032639 Tex protein, YqgF-like domain AL549_RS22565 bbc41f6343dbf94158c5f7230dea2c05 774 Gene3D G3DSA:1.10.3500.10 102 358 1.1E-80 T 28-03-2018 IPR023323 Tex-like domain AL549_RS22565 bbc41f6343dbf94158c5f7230dea2c05 774 SUPERFAMILY SSF47781 560 632 1.16E-18 T 28-03-2018 IPR010994 RuvA domain 2-like AL549_RS22565 bbc41f6343dbf94158c5f7230dea2c05 774 SMART SM00316 649 720 3.1E-25 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL549_RS22565 bbc41f6343dbf94158c5f7230dea2c05 774 SUPERFAMILY SSF50249 638 723 1.19E-24 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS22565 bbc41f6343dbf94158c5f7230dea2c05 774 Pfam PF12836 Helix-hairpin-helix motif 491 555 7.0E-28 T 28-03-2018 AL549_RS22565 bbc41f6343dbf94158c5f7230dea2c05 774 SUPERFAMILY SSF158832 3 321 4.18E-120 T 28-03-2018 AL549_RS12150 7b012ca563f9454fcbbb74353aa7264e 395 SMART SM00421 330 387 6.3E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS12150 7b012ca563f9454fcbbb74353aa7264e 395 Gene3D G3DSA:1.10.10.10 177 391 2.7E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS12150 7b012ca563f9454fcbbb74353aa7264e 395 Pfam PF00196 Bacterial regulatory proteins, luxR family 333 384 2.1E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS12150 7b012ca563f9454fcbbb74353aa7264e 395 Gene3D G3DSA:3.30.450.80 18 176 9.9E-5 T 28-03-2018 AL549_RS12150 7b012ca563f9454fcbbb74353aa7264e 395 SUPERFAMILY SSF46894 323 387 3.37E-13 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS23695 c27195e32eabe2ae446dc4bcdd740093 176 Pfam PF05068 Mannitol repressor 7 170 7.3E-61 T 28-03-2018 IPR007761 Mannitol repressor MtlR-like AL549_RS23695 c27195e32eabe2ae446dc4bcdd740093 176 SUPERFAMILY SSF158668 4 170 1.44E-56 T 28-03-2018 AL549_RS23695 c27195e32eabe2ae446dc4bcdd740093 176 Gene3D G3DSA:1.20.120.330 5 170 1.2E-59 T 28-03-2018 AL549_RS07560 d0dec83904f7f6393afa5c6d9be114a5 420 Pfam PF14450 Cell division protein FtsA 207 381 1.9E-24 T 28-03-2018 AL549_RS07560 d0dec83904f7f6393afa5c6d9be114a5 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 2.5E-28 T 28-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AL549_RS07560 d0dec83904f7f6393afa5c6d9be114a5 420 SUPERFAMILY SSF53067 8 221 1.71E-59 T 28-03-2018 AL549_RS07560 d0dec83904f7f6393afa5c6d9be114a5 420 SMART SM00842 10 196 3.3E-94 T 28-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AL549_RS07560 d0dec83904f7f6393afa5c6d9be114a5 420 SUPERFAMILY SSF53067 198 384 3.02E-46 T 28-03-2018 AL549_RS07560 d0dec83904f7f6393afa5c6d9be114a5 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.297 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 AL549_RS07560 d0dec83904f7f6393afa5c6d9be114a5 420 Gene3D G3DSA:3.30.420.40 197 359 7.9E-23 T 28-03-2018 AL549_RS07560 d0dec83904f7f6393afa5c6d9be114a5 420 Gene3D G3DSA:3.30.420.40 1 188 1.3E-33 T 28-03-2018 AL549_RS07560 d0dec83904f7f6393afa5c6d9be114a5 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.0E-150 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 AL549_RS07560 d0dec83904f7f6393afa5c6d9be114a5 420 PIRSF PIRSF003101 1 420 5.8E-147 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 AL549_RS10095 fcb0eac667fa71c4ef3bac99f2d3780e 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 28-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AL549_RS10095 fcb0eac667fa71c4ef3bac99f2d3780e 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 2.2E-118 T 28-03-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 AL549_RS10095 fcb0eac667fa71c4ef3bac99f2d3780e 337 SMART SM00870 5 324 1.8E-139 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL549_RS10095 fcb0eac667fa71c4ef3bac99f2d3780e 337 Pfam PF00710 Asparaginase, N-terminal 5 191 7.5E-67 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AL549_RS10095 fcb0eac667fa71c4ef3bac99f2d3780e 337 PIRSF PIRSF500176 2 333 4.3E-109 T 28-03-2018 AL549_RS10095 fcb0eac667fa71c4ef3bac99f2d3780e 337 PIRSF PIRSF001220 1 335 2.6E-95 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL549_RS10095 fcb0eac667fa71c4ef3bac99f2d3780e 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 28-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AL549_RS10095 fcb0eac667fa71c4ef3bac99f2d3780e 337 Gene3D G3DSA:3.40.50.40 212 337 6.0E-39 T 28-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 AL549_RS10095 fcb0eac667fa71c4ef3bac99f2d3780e 337 Gene3D G3DSA:3.40.50.1170 1 211 4.0E-85 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AL549_RS10095 fcb0eac667fa71c4ef3bac99f2d3780e 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL549_RS10095 fcb0eac667fa71c4ef3bac99f2d3780e 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL549_RS10095 fcb0eac667fa71c4ef3bac99f2d3780e 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL549_RS10095 fcb0eac667fa71c4ef3bac99f2d3780e 337 SUPERFAMILY SSF53774 3 336 6.67E-114 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL549_RS07645 25507f3d5742b17cfa6c117fe31ebcb8 142 Pfam PF07386 Protein of unknown function (DUF1499) 30 133 4.7E-23 T 28-03-2018 IPR010865 Protein of unknown function DUF1499 AL549_RS07645 25507f3d5742b17cfa6c117fe31ebcb8 142 PIRSF PIRSF026426 1 142 1.5E-49 T 28-03-2018 IPR010865 Protein of unknown function DUF1499 AL549_RS16450 5fb09de38cb920460d9d5accf6527531 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 207 3.5E-42 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL549_RS16450 5fb09de38cb920460d9d5accf6527531 227 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 5.1E-93 T 28-03-2018 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 AL549_RS02700 5ddb63b946022fc8fa3139e9659e495c 298 Gene3D G3DSA:3.40.50.1980 17 137 2.0E-27 T 28-03-2018 AL549_RS02700 5ddb63b946022fc8fa3139e9659e495c 298 SUPERFAMILY SSF53807 32 293 4.71E-59 T 28-03-2018 AL549_RS02700 5ddb63b946022fc8fa3139e9659e495c 298 Gene3D G3DSA:3.40.50.1980 138 298 5.7E-30 T 28-03-2018 AL549_RS02700 5ddb63b946022fc8fa3139e9659e495c 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 238 255 2.4E-14 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AL549_RS02700 5ddb63b946022fc8fa3139e9659e495c 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 54 72 2.4E-14 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AL549_RS02700 5ddb63b946022fc8fa3139e9659e495c 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 85 100 2.4E-14 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AL549_RS02700 5ddb63b946022fc8fa3139e9659e495c 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 210 228 2.4E-14 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AL549_RS02700 5ddb63b946022fc8fa3139e9659e495c 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 275 288 2.4E-14 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AL549_RS02700 5ddb63b946022fc8fa3139e9659e495c 298 Pfam PF01497 Periplasmic binding protein 37 273 4.0E-30 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL549_RS18970 75c99fa2985c006dea84a5ec186fc5a9 425 Gene3D G3DSA:3.10.580.10 185 336 1.3E-22 T 28-03-2018 AL549_RS18970 75c99fa2985c006dea84a5ec186fc5a9 425 Gene3D G3DSA:3.30.465.10 338 425 4.4E-17 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL549_RS18970 75c99fa2985c006dea84a5ec186fc5a9 425 SMART SM01091 342 420 1.1E-22 T 28-03-2018 IPR005170 Transporter-associated domain AL549_RS18970 75c99fa2985c006dea84a5ec186fc5a9 425 Pfam PF00571 CBS domain 278 326 1.1E-5 T 28-03-2018 IPR000644 CBS domain AL549_RS18970 75c99fa2985c006dea84a5ec186fc5a9 425 SUPERFAMILY SSF56176 340 421 1.47E-20 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL549_RS18970 75c99fa2985c006dea84a5ec186fc5a9 425 SUPERFAMILY SSF54631 192 329 7.58E-25 T 28-03-2018 AL549_RS18970 75c99fa2985c006dea84a5ec186fc5a9 425 Pfam PF03471 Transporter associated domain 344 417 4.7E-17 T 28-03-2018 IPR005170 Transporter-associated domain AL549_RS18970 75c99fa2985c006dea84a5ec186fc5a9 425 Pfam PF01595 Domain of unknown function DUF21 13 181 4.1E-49 T 28-03-2018 IPR002550 Domain of unknown function DUF21 AL549_RS10295 38a618d84d37eab441d9afc0b0317b98 192 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.264 T 28-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 AL549_RS10295 38a618d84d37eab441d9afc0b0317b98 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 4.8E-62 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AL549_RS10295 38a618d84d37eab441d9afc0b0317b98 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 6.6E-90 T 28-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 AL549_RS10295 38a618d84d37eab441d9afc0b0317b98 192 PIRSF PIRSF006102 1 192 2.0E-64 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AL549_RS22100 1cbcf1ad2f8bc91283818a42d2fff5e4 374 Pfam PF04055 Radical SAM superfamily 81 222 5.0E-9 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS22100 1cbcf1ad2f8bc91283818a42d2fff5e4 374 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 357 1.9E-27 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL549_RS22100 1cbcf1ad2f8bc91283818a42d2fff5e4 374 Gene3D G3DSA:3.20.20.70 17 369 2.4E-51 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS22100 1cbcf1ad2f8bc91283818a42d2fff5e4 374 SUPERFAMILY SSF102114 34 362 3.01E-54 T 28-03-2018 AL549_RS22100 1cbcf1ad2f8bc91283818a42d2fff5e4 374 SMART SM00876 256 359 4.0E-38 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL549_RS22100 1cbcf1ad2f8bc91283818a42d2fff5e4 374 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 366 3.8E-176 T 28-03-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 AL549_RS10855 726a763a7d2fd312024ea2a6829a8d50 232 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.442 T 28-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL549_RS10855 726a763a7d2fd312024ea2a6829a8d50 232 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 3.1E-51 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL549_RS10855 726a763a7d2fd312024ea2a6829a8d50 232 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 8.6E-57 T 28-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL549_RS10855 726a763a7d2fd312024ea2a6829a8d50 232 Gene3D G3DSA:3.20.20.70 1 231 9.0E-69 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS10855 726a763a7d2fd312024ea2a6829a8d50 232 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 28-03-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL549_RS10855 726a763a7d2fd312024ea2a6829a8d50 232 SUPERFAMILY SSF51366 1 228 4.08E-76 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL549_RS10855 726a763a7d2fd312024ea2a6829a8d50 232 SMART SM00934 5 226 3.4E-100 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL549_RS02270 9deee1b9b13b4dee0e7a2774496c6aa4 566 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 275 1.1E-5 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS02270 9deee1b9b13b4dee0e7a2774496c6aa4 566 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 527 555 0.0079 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS02270 9deee1b9b13b4dee0e7a2774496c6aa4 566 ProSitePatterns PS00211 ABC transporters family signature. 448 462 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS02270 9deee1b9b13b4dee0e7a2774496c6aa4 566 SMART SM00382 34 241 1.2E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS02270 9deee1b9b13b4dee0e7a2774496c6aa4 566 SMART SM00382 326 524 1.4E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS02270 9deee1b9b13b4dee0e7a2774496c6aa4 566 SUPERFAMILY SSF52540 292 547 6.98E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS02270 9deee1b9b13b4dee0e7a2774496c6aa4 566 SUPERFAMILY SSF52540 5 262 4.9E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS02270 9deee1b9b13b4dee0e7a2774496c6aa4 566 Pfam PF00005 ABC transporter 26 191 1.8E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS02270 9deee1b9b13b4dee0e7a2774496c6aa4 566 Pfam PF00005 ABC transporter 318 476 2.5E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS02270 9deee1b9b13b4dee0e7a2774496c6aa4 566 Gene3D G3DSA:3.40.50.300 2 286 1.8E-64 T 28-03-2018 AL549_RS02270 9deee1b9b13b4dee0e7a2774496c6aa4 566 Gene3D G3DSA:3.40.50.300 288 566 4.6E-66 T 28-03-2018 AL549_RS02270 9deee1b9b13b4dee0e7a2774496c6aa4 566 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS09715 db24ba44ed412340b5800c960d1a31d4 455 Gene3D G3DSA:3.30.300.30 346 455 4.7E-14 T 28-03-2018 AL549_RS09715 db24ba44ed412340b5800c960d1a31d4 455 Pfam PF00501 AMP-binding enzyme 22 308 1.6E-15 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL549_RS09715 db24ba44ed412340b5800c960d1a31d4 455 SUPERFAMILY SSF56801 30 454 4.97E-52 T 28-03-2018 AL549_RS09715 db24ba44ed412340b5800c960d1a31d4 455 Gene3D G3DSA:3.40.50.980 148 299 9.2E-17 T 28-03-2018 AL549_RS09715 db24ba44ed412340b5800c960d1a31d4 455 Gene3D G3DSA:3.40.50.980 11 147 6.3E-8 T 28-03-2018 AL549_RS18760 3b0af2e40f8fa0eba44650bdc0466d56 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 28-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AL549_RS18760 3b0af2e40f8fa0eba44650bdc0466d56 409 Gene3D G3DSA:1.10.3430.10 7 383 1.0E-105 T 28-03-2018 AL549_RS18760 3b0af2e40f8fa0eba44650bdc0466d56 409 SUPERFAMILY SSF111352 12 383 3.53E-105 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AL549_RS18760 3b0af2e40f8fa0eba44650bdc0466d56 409 Pfam PF00909 Ammonium Transporter Family 18 402 3.1E-101 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AL549_RS18760 3b0af2e40f8fa0eba44650bdc0466d56 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 8.4E-205 T 28-03-2018 IPR019879 Ammonium transporter, marine subtype AL549_RS01345 8d5cef235d69aaac2f311377858c2dde 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 286 2.4E-18 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL549_RS01345 8d5cef235d69aaac2f311377858c2dde 368 Gene3D G3DSA:1.20.1600.10 36 303 2.2E-28 T 28-03-2018 AL549_RS01345 8d5cef235d69aaac2f311377858c2dde 368 SUPERFAMILY SSF111369 200 283 2.88E-5 T 28-03-2018 AL549_RS01345 8d5cef235d69aaac2f311377858c2dde 368 SUPERFAMILY SSF111369 56 103 9.15E-12 T 28-03-2018 AL549_RS01345 8d5cef235d69aaac2f311377858c2dde 368 SUPERFAMILY SSF111369 132 178 9.15E-12 T 28-03-2018 AL549_RS01345 8d5cef235d69aaac2f311377858c2dde 368 Pfam PF00529 HlyD membrane-fusion protein of T1SS 31 316 1.5E-6 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL549_RS17910 0f3e29370e07ea0c833476c897dba050 287 SUPERFAMILY SSF56281 30 274 1.76E-23 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS17910 0f3e29370e07ea0c833476c897dba050 287 Gene3D G3DSA:3.60.15.10 1 278 1.1E-24 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS17910 0f3e29370e07ea0c833476c897dba050 287 SMART SM00849 34 272 1.1E-5 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS17910 0f3e29370e07ea0c833476c897dba050 287 Pfam PF00753 Metallo-beta-lactamase superfamily 35 120 9.3E-11 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS10470 919a5eb0e444ccf0b1e533a349441311 188 SUPERFAMILY SSF50104 1 65 5.96E-12 T 28-03-2018 IPR008991 Translation protein SH3-like domain AL549_RS10470 919a5eb0e444ccf0b1e533a349441311 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 122 1.2E-12 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AL549_RS10470 919a5eb0e444ccf0b1e533a349441311 188 SMART SM00841 132 187 1.6E-28 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AL549_RS10470 919a5eb0e444ccf0b1e533a349441311 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 42.202 T 28-03-2018 IPR011897 Translation elongation factor P-like, YeiP AL549_RS10470 919a5eb0e444ccf0b1e533a349441311 188 Gene3D G3DSA:2.40.50.140 132 187 2.9E-22 T 28-03-2018 AL549_RS10470 919a5eb0e444ccf0b1e533a349441311 188 SUPERFAMILY SSF50249 67 129 5.14E-11 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS10470 919a5eb0e444ccf0b1e533a349441311 188 Gene3D G3DSA:2.40.50.140 67 130 9.1E-15 T 28-03-2018 AL549_RS10470 919a5eb0e444ccf0b1e533a349441311 188 SMART SM01185 69 124 1.9E-13 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AL549_RS10470 919a5eb0e444ccf0b1e533a349441311 188 Gene3D G3DSA:2.30.30.30 2 63 1.1E-14 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 AL549_RS10470 919a5eb0e444ccf0b1e533a349441311 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 8.1E-91 T 28-03-2018 IPR011897 Translation elongation factor P-like, YeiP AL549_RS10470 919a5eb0e444ccf0b1e533a349441311 188 SUPERFAMILY SSF50249 132 188 1.4E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS10470 919a5eb0e444ccf0b1e533a349441311 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 28-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AL549_RS10470 919a5eb0e444ccf0b1e533a349441311 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 6.2E-18 T 28-03-2018 IPR013185 Translation elongation factor, KOW-like AL549_RS10470 919a5eb0e444ccf0b1e533a349441311 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 7.7E-21 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AL549_RS10470 919a5eb0e444ccf0b1e533a349441311 188 PIRSF PIRSF005901 1 188 1.1E-60 T 28-03-2018 IPR020599 Translation elongation factor P/YeiP AL549_RS17760 8d437094930fbca336600d3432fa0ca5 319 Gene3D G3DSA:3.90.226.10 12 315 7.8E-67 T 28-03-2018 AL549_RS17760 8d437094930fbca336600d3432fa0ca5 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.1E-163 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS17760 8d437094930fbca336600d3432fa0ca5 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.427 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS17760 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.0E-48 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS17760 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.0E-48 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS17760 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.0E-48 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS17760 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.0E-48 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS17760 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.0E-48 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS17760 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.0E-48 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS17760 8d437094930fbca336600d3432fa0ca5 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 7.2E-64 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS17760 8d437094930fbca336600d3432fa0ca5 319 SUPERFAMILY SSF52096 5 318 3.83E-104 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS23485 1b38d68bae1637bd49347b5a647473aa 162 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 1.1E-54 T 28-03-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 AL549_RS23485 1b38d68bae1637bd49347b5a647473aa 162 Pfam PF02470 MlaD protein 40 118 1.9E-19 T 28-03-2018 IPR003399 Mce/MlaD AL549_RS18015 d229d5d565b7955a5cf41e480b17f761 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.946 T 28-03-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AL549_RS18015 d229d5d565b7955a5cf41e480b17f761 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 1.7E-62 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AL549_RS18015 d229d5d565b7955a5cf41e480b17f761 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 4.0E-110 T 28-03-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AL549_RS18015 d229d5d565b7955a5cf41e480b17f761 210 PIRSF PIRSF006102 3 210 4.0E-73 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AL549_RS15335 cd40eb71624e6d3813ba51561564c7cc 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 2.0E-25 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL549_RS15335 cd40eb71624e6d3813ba51561564c7cc 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 7.0E-18 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL549_RS15335 cd40eb71624e6d3813ba51561564c7cc 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.0E-18 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL549_RS15335 cd40eb71624e6d3813ba51561564c7cc 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 7.0E-18 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL549_RS15335 cd40eb71624e6d3813ba51561564c7cc 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 28-03-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS15335 cd40eb71624e6d3813ba51561564c7cc 64 SUPERFAMILY SSF143034 2 63 2.88E-19 T 28-03-2018 AL549_RS15335 cd40eb71624e6d3813ba51561564c7cc 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.458 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL549_RS15335 cd40eb71624e6d3813ba51561564c7cc 64 Pfam PF01632 Ribosomal protein L35 2 61 1.1E-19 T 28-03-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS18490 4d8da69b9e26578aee913c4783336fee 167 SUPERFAMILY SSF55729 1 130 3.72E-25 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS18490 4d8da69b9e26578aee913c4783336fee 167 Pfam PF13527 Acetyltransferase (GNAT) domain 4 123 3.7E-10 T 28-03-2018 AL549_RS18490 4d8da69b9e26578aee913c4783336fee 167 Gene3D G3DSA:3.40.630.30 1 128 3.2E-15 T 28-03-2018 AL549_RS06365 5698a2c26930843e624b33ba3096e13c 323 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 248 283 3.7E-10 T 28-03-2018 IPR010177 Doubled CXXCH motif AL549_RS06365 5698a2c26930843e624b33ba3096e13c 323 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 208 240 3.4E-8 T 28-03-2018 IPR010177 Doubled CXXCH motif AL549_RS06365 5698a2c26930843e624b33ba3096e13c 323 TIGRFAM TIGR03508 decahem_SO: decaheme c-type cytochrome, DmsE family 56 316 2.5E-96 T 28-03-2018 IPR020015 Decaheme cytochrome, c-type, DmsE AL549_RS06365 5698a2c26930843e624b33ba3096e13c 323 Gene3D G3DSA:3.90.10.10 20 89 0.0012 T 28-03-2018 AL549_RS06365 5698a2c26930843e624b33ba3096e13c 323 Gene3D G3DSA:3.90.10.10 90 137 4.2E-5 T 28-03-2018 AL549_RS06365 5698a2c26930843e624b33ba3096e13c 323 Gene3D G3DSA:1.10.1130.10 210 230 2.6E-5 T 28-03-2018 AL549_RS06365 5698a2c26930843e624b33ba3096e13c 323 SUPERFAMILY SSF48695 58 307 1.86E-49 T 28-03-2018 IPR011031 Multihaem cytochrome AL549_RS06365 5698a2c26930843e624b33ba3096e13c 323 Gene3D G3DSA:3.90.10.10 231 315 8.3E-12 T 28-03-2018 AL549_RS06365 5698a2c26930843e624b33ba3096e13c 323 Gene3D G3DSA:3.90.10.10 138 209 6.1E-13 T 28-03-2018 AL549_RS06365 5698a2c26930843e624b33ba3096e13c 323 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 201 241 1.2E-11 T 28-03-2018 IPR010177 Doubled CXXCH motif AL549_RS06365 5698a2c26930843e624b33ba3096e13c 323 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 248 283 3.5E-11 T 28-03-2018 IPR010177 Doubled CXXCH motif AL549_RS06365 5698a2c26930843e624b33ba3096e13c 323 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 157 191 2.0E-6 T 28-03-2018 IPR010177 Doubled CXXCH motif AL549_RS06365 5698a2c26930843e624b33ba3096e13c 323 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 87 143 9.4E-7 T 28-03-2018 IPR010177 Doubled CXXCH motif AL549_RS09445 a4e1795a816f11e74b8cdd21da2d4ac8 468 Gene3D G3DSA:1.10.3860.10 19 452 1.4E-76 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS09445 a4e1795a816f11e74b8cdd21da2d4ac8 468 SUPERFAMILY SSF118215 30 444 1.11E-82 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS09445 a4e1795a816f11e74b8cdd21da2d4ac8 468 Pfam PF00375 Sodium:dicarboxylate symporter family 30 444 2.2E-90 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS09445 a4e1795a816f11e74b8cdd21da2d4ac8 468 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 2.5E-14 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS09445 a4e1795a816f11e74b8cdd21da2d4ac8 468 PRINTS PR00173 Glutamate-aspartate symporter signature 185 207 2.5E-14 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS09445 a4e1795a816f11e74b8cdd21da2d4ac8 468 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 2.5E-14 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS09445 a4e1795a816f11e74b8cdd21da2d4ac8 468 PRINTS PR00173 Glutamate-aspartate symporter signature 372 391 2.5E-14 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS09445 a4e1795a816f11e74b8cdd21da2d4ac8 468 PRINTS PR00173 Glutamate-aspartate symporter signature 399 419 2.5E-14 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS09445 a4e1795a816f11e74b8cdd21da2d4ac8 468 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 2.5E-14 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS11595 9f0a0823bea85843982431c8271e626b 573 Pfam PF00005 ABC transporter 356 502 8.7E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS11595 9f0a0823bea85843982431c8271e626b 573 Pfam PF00664 ABC transporter transmembrane region 24 285 1.4E-7 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS11595 9f0a0823bea85843982431c8271e626b 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS11595 9f0a0823bea85843982431c8271e626b 573 SUPERFAMILY SSF90123 7 318 5.1E-37 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS11595 9f0a0823bea85843982431c8271e626b 573 SMART SM00382 365 549 8.6E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS11595 9f0a0823bea85843982431c8271e626b 573 Gene3D G3DSA:1.20.1560.10 3 323 1.7E-27 T 28-03-2018 AL549_RS11595 9f0a0823bea85843982431c8271e626b 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 8 533 2.8E-136 T 28-03-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 AL549_RS11595 9f0a0823bea85843982431c8271e626b 573 SUPERFAMILY SSF52540 335 571 2.57E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11595 9f0a0823bea85843982431c8271e626b 573 Gene3D G3DSA:3.40.50.300 324 572 1.6E-65 T 28-03-2018 AL549_RS23605 3cf7bfe01bcad443e9f603a1b0d63ac3 287 SUPERFAMILY SSF158682 48 181 1.75E-23 T 28-03-2018 AL549_RS23605 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Gene3D G3DSA:1.10.287.110 184 285 1.6E-18 T 28-03-2018 IPR001623 DnaJ domain AL549_RS23605 3cf7bfe01bcad443e9f603a1b0d63ac3 287 SUPERFAMILY SSF46565 138 283 4.81E-32 T 28-03-2018 IPR001623 DnaJ domain AL549_RS23605 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Pfam PF00226 DnaJ domain 221 283 5.1E-13 T 28-03-2018 IPR001623 DnaJ domain AL549_RS23605 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Gene3D G3DSA:1.10.3680.10 31 183 1.6E-30 T 28-03-2018 IPR029024 TerB-like AL549_RS23605 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 286 40.25 T 28-03-2018 IPR023749 Co-chaperone DjlA GO:0051087 AL549_RS23605 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Pfam PF05099 Tellurite resistance protein TerB 46 177 3.5E-18 T 28-03-2018 IPR007791 Co-chaperone DjlA, N-terminal AL549_RS23605 3cf7bfe01bcad443e9f603a1b0d63ac3 287 SMART SM00271 220 285 5.1E-20 T 28-03-2018 IPR001623 DnaJ domain AL549_RS23605 3cf7bfe01bcad443e9f603a1b0d63ac3 287 PRINTS PR00625 DnaJ domain signature 265 285 6.0E-11 T 28-03-2018 IPR001623 DnaJ domain AL549_RS23605 3cf7bfe01bcad443e9f603a1b0d63ac3 287 PRINTS PR00625 DnaJ domain signature 223 241 6.0E-11 T 28-03-2018 IPR001623 DnaJ domain AL549_RS23605 3cf7bfe01bcad443e9f603a1b0d63ac3 287 PRINTS PR00625 DnaJ domain signature 241 256 6.0E-11 T 28-03-2018 IPR001623 DnaJ domain AL549_RS19705 7d7fea41816612cb95d73dfc229f4541 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 103 150 1.1E-18 T 28-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AL549_RS19705 7d7fea41816612cb95d73dfc229f4541 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 1.9E-59 T 28-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AL549_RS19705 7d7fea41816612cb95d73dfc229f4541 153 Gene3D G3DSA:3.30.70.140 5 97 1.0E-33 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AL549_RS19705 7d7fea41816612cb95d73dfc229f4541 153 Gene3D G3DSA:2.30.30.20 102 150 3.1E-17 T 28-03-2018 AL549_RS19705 7d7fea41816612cb95d73dfc229f4541 153 SUPERFAMILY SSF57825 101 151 5.1E-16 T 28-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AL549_RS19705 7d7fea41816612cb95d73dfc229f4541 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.6E-30 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AL549_RS19705 7d7fea41816612cb95d73dfc229f4541 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.715 T 28-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AL549_RS19705 7d7fea41816612cb95d73dfc229f4541 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 1.0E-46 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AL549_RS19705 7d7fea41816612cb95d73dfc229f4541 153 SUPERFAMILY SSF54893 2 100 1.44E-35 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AL549_RS04745 ea935d9ace3c518dbeaccf43cb22837a 465 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 1.0E-139 T 28-03-2018 AL549_RS04745 ea935d9ace3c518dbeaccf43cb22837a 465 Gene3D G3DSA:1.20.1250.20 246 461 4.3E-20 T 28-03-2018 AL549_RS04745 ea935d9ace3c518dbeaccf43cb22837a 465 PIRSF PIRSF002808 9 460 8.8E-109 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AL549_RS04745 ea935d9ace3c518dbeaccf43cb22837a 465 SUPERFAMILY SSF103473 17 450 1.57E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS04745 ea935d9ace3c518dbeaccf43cb22837a 465 Pfam PF07690 Major Facilitator Superfamily 35 396 3.6E-34 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS04745 ea935d9ace3c518dbeaccf43cb22837a 465 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 28-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 AL549_RS04745 ea935d9ace3c518dbeaccf43cb22837a 465 Gene3D G3DSA:1.20.1250.20 21 227 3.0E-23 T 28-03-2018 AL549_RS07070 1e7e036f4557ccdb7005abfab48bb815 271 SUPERFAMILY SSF56784 6 260 1.12E-53 T 28-03-2018 IPR023214 HAD-like domain AL549_RS07070 1e7e036f4557ccdb7005abfab48bb815 271 Gene3D G3DSA:1.10.150.240 24 90 6.5E-30 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AL549_RS07070 1e7e036f4557ccdb7005abfab48bb815 271 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 6 259 9.4E-118 T 28-03-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AL549_RS07070 1e7e036f4557ccdb7005abfab48bb815 271 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 271 141.286 T 28-03-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AL549_RS07070 1e7e036f4557ccdb7005abfab48bb815 271 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 205 6.0E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS07070 1e7e036f4557ccdb7005abfab48bb815 271 Gene3D G3DSA:3.40.50.1000 91 260 7.5E-20 T 28-03-2018 IPR023214 HAD-like domain AL549_RS07070 1e7e036f4557ccdb7005abfab48bb815 271 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 205 3.3E-9 T 28-03-2018 IPR023214 HAD-like domain AL549_RS02815 5def8008d356b4b37461cba122ec7f05 655 SUPERFAMILY SSF56281 26 526 6.72E-156 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS02815 5def8008d356b4b37461cba122ec7f05 655 Pfam PF14864 Alkyl sulfatase C-terminal 532 655 5.3E-41 T 28-03-2018 IPR029229 Alkyl sulfatase, C-terminal AL549_RS02815 5def8008d356b4b37461cba122ec7f05 655 Pfam PF14863 Alkyl sulfatase dimerisation 388 524 1.4E-56 T 28-03-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 AL549_RS02815 5def8008d356b4b37461cba122ec7f05 655 Pfam PF00753 Metallo-beta-lactamase superfamily 126 349 4.1E-37 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS02815 5def8008d356b4b37461cba122ec7f05 655 SUPERFAMILY SSF55718 534 655 6.36E-37 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AL549_RS02815 5def8008d356b4b37461cba122ec7f05 655 Gene3D G3DSA:3.30.1050.10 527 655 1.0E-31 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AL549_RS02815 5def8008d356b4b37461cba122ec7f05 655 SMART SM00849 127 349 6.4E-23 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS02815 5def8008d356b4b37461cba122ec7f05 655 Gene3D G3DSA:3.60.15.10 100 397 5.3E-22 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS18190 e9d3aeb63c908616dc6083a9c87faf0e 366 Gene3D G3DSA:3.90.70.10 162 364 5.4E-18 T 28-03-2018 AL549_RS18190 e9d3aeb63c908616dc6083a9c87faf0e 366 Pfam PF11814 Peptidase_C39 like family 157 359 2.2E-79 T 28-03-2018 IPR021770 Protein of unknown function DUF3335 AL549_RS18190 e9d3aeb63c908616dc6083a9c87faf0e 366 Gene3D G3DSA:3.40.630.30 1 153 2.1E-29 T 28-03-2018 AL549_RS18190 e9d3aeb63c908616dc6083a9c87faf0e 366 SUPERFAMILY SSF55729 1 147 1.25E-30 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS18190 e9d3aeb63c908616dc6083a9c87faf0e 366 Pfam PF13673 Acetyltransferase (GNAT) domain 20 126 2.4E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS17980 99ee3091155152ff4a7f54a475e03448 639 SMART SM00487 14 210 7.4E-27 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS17980 99ee3091155152ff4a7f54a475e03448 639 SUPERFAMILY SSF52540 59 341 1.45E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS17980 99ee3091155152ff4a7f54a475e03448 639 Gene3D G3DSA:3.40.50.300 202 414 4.0E-47 T 28-03-2018 AL549_RS17980 99ee3091155152ff4a7f54a475e03448 639 SMART SM00490 244 325 4.4E-25 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS17980 99ee3091155152ff4a7f54a475e03448 639 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 349 5.4E-112 T 28-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AL549_RS17980 99ee3091155152ff4a7f54a475e03448 639 Pfam PF16124 RecQ zinc-binding 511 558 3.9E-8 T 28-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AL549_RS17980 99ee3091155152ff4a7f54a475e03448 639 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 133 142 - T 28-03-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site AL549_RS17980 99ee3091155152ff4a7f54a475e03448 639 Gene3D G3DSA:1.10.10.10 460 637 3.9E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS17980 99ee3091155152ff4a7f54a475e03448 639 Pfam PF00271 Helicase conserved C-terminal domain 216 324 3.4E-19 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS17980 99ee3091155152ff4a7f54a475e03448 639 Pfam PF00270 DEAD/DEAH box helicase 21 180 6.6E-17 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL549_RS17980 99ee3091155152ff4a7f54a475e03448 639 Gene3D G3DSA:3.40.50.300 1 200 2.2E-37 T 28-03-2018 AL549_RS04915 4e4e776ba7f15030383822d58154369c 258 PIRSF PIRSF000090 1 258 5.1E-79 T 28-03-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AL549_RS04915 4e4e776ba7f15030383822d58154369c 258 SUPERFAMILY SSF52402 2 251 6.98E-73 T 28-03-2018 AL549_RS04915 4e4e776ba7f15030383822d58154369c 258 SMART SM00893 23 220 1.5E-52 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL549_RS04915 4e4e776ba7f15030383822d58154369c 258 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 164 184 - T 28-03-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AL549_RS04915 4e4e776ba7f15030383822d58154369c 258 Pfam PF01012 Electron transfer flavoprotein domain 29 214 2.7E-38 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL549_RS04915 4e4e776ba7f15030383822d58154369c 258 Gene3D G3DSA:3.40.50.620 1 257 1.4E-73 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS06295 2aced01b5f7e48c11877240b242bf648 397 Pfam PF00871 Acetokinase family 6 391 6.4E-141 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS06295 2aced01b5f7e48c11877240b242bf648 397 SUPERFAMILY SSF53067 158 396 8.1E-79 T 28-03-2018 AL549_RS06295 2aced01b5f7e48c11877240b242bf648 397 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 3.6E-143 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS06295 2aced01b5f7e48c11877240b242bf648 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS06295 2aced01b5f7e48c11877240b242bf648 397 SUPERFAMILY SSF53067 5 196 9.06E-62 T 28-03-2018 AL549_RS06295 2aced01b5f7e48c11877240b242bf648 397 PRINTS PR00471 Acetate kinase family signature 378 390 8.9E-45 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS06295 2aced01b5f7e48c11877240b242bf648 397 PRINTS PR00471 Acetate kinase family signature 203 224 8.9E-45 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS06295 2aced01b5f7e48c11877240b242bf648 397 PRINTS PR00471 Acetate kinase family signature 299 312 8.9E-45 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS06295 2aced01b5f7e48c11877240b242bf648 397 PRINTS PR00471 Acetate kinase family signature 6 17 8.9E-45 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS06295 2aced01b5f7e48c11877240b242bf648 397 PRINTS PR00471 Acetate kinase family signature 173 186 8.9E-45 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS06295 2aced01b5f7e48c11877240b242bf648 397 PRINTS PR00471 Acetate kinase family signature 321 337 8.9E-45 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS06295 2aced01b5f7e48c11877240b242bf648 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS06295 2aced01b5f7e48c11877240b242bf648 397 PIRSF PIRSF000722 2 397 5.8E-133 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS06295 2aced01b5f7e48c11877240b242bf648 397 Gene3D G3DSA:3.30.420.40 196 397 1.7E-71 T 28-03-2018 AL549_RS06295 2aced01b5f7e48c11877240b242bf648 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 167.986 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL549_RS06295 2aced01b5f7e48c11877240b242bf648 397 Gene3D G3DSA:3.30.420.40 5 195 8.2E-65 T 28-03-2018 AL549_RS04350 11ca4755bff99349a3fda318ef408422 477 Gene3D G3DSA:2.30.40.10 1 69 1.1E-19 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS04350 11ca4755bff99349a3fda318ef408422 477 Gene3D G3DSA:3.20.20.140 70 393 7.7E-77 T 28-03-2018 AL549_RS04350 11ca4755bff99349a3fda318ef408422 477 SUPERFAMILY SSF51338 2 55 1.54E-19 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS04350 11ca4755bff99349a3fda318ef408422 477 SUPERFAMILY SSF51338 414 468 1.54E-19 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS04350 11ca4755bff99349a3fda318ef408422 477 Pfam PF07969 Amidohydrolase family 45 455 5.6E-44 T 28-03-2018 IPR013108 Amidohydrolase 3 AL549_RS04350 11ca4755bff99349a3fda318ef408422 477 Gene3D G3DSA:2.30.40.10 394 461 4.4E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS04350 11ca4755bff99349a3fda318ef408422 477 SUPERFAMILY SSF51556 56 414 4.08E-86 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL549_RS08535 652d529497555c50997af41dbdd83935 376 Gene3D G3DSA:3.90.180.10 1 193 1.4E-59 T 28-03-2018 AL549_RS08535 652d529497555c50997af41dbdd83935 376 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 160 3.2E-25 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL549_RS08535 652d529497555c50997af41dbdd83935 376 SUPERFAMILY SSF50129 324 375 3.95E-11 T 28-03-2018 IPR011032 GroES-like AL549_RS08535 652d529497555c50997af41dbdd83935 376 Pfam PF00107 Zinc-binding dehydrogenase 203 326 7.7E-26 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL549_RS08535 652d529497555c50997af41dbdd83935 376 Gene3D G3DSA:3.40.50.720 194 318 3.1E-26 T 28-03-2018 AL549_RS08535 652d529497555c50997af41dbdd83935 376 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AL549_RS08535 652d529497555c50997af41dbdd83935 376 SUPERFAMILY SSF51735 166 339 1.56E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS08535 652d529497555c50997af41dbdd83935 376 SUPERFAMILY SSF50129 2 193 4.72E-73 T 28-03-2018 IPR011032 GroES-like AL549_RS08535 652d529497555c50997af41dbdd83935 376 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 8 375 8.0E-225 T 28-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 AL549_RS08535 652d529497555c50997af41dbdd83935 376 SMART SM00829 16 373 0.0024 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL549_RS20125 71629052724381763305884815b5cc88 299 SUPERFAMILY SSF46785 1 86 3.98E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS20125 71629052724381763305884815b5cc88 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.6E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS20125 71629052724381763305884815b5cc88 299 SUPERFAMILY SSF53850 89 293 3.06E-38 T 28-03-2018 AL549_RS20125 71629052724381763305884815b5cc88 299 Pfam PF03466 LysR substrate binding domain 89 292 3.6E-43 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS20125 71629052724381763305884815b5cc88 299 Gene3D G3DSA:3.40.190.10 178 267 7.8E-24 T 28-03-2018 AL549_RS20125 71629052724381763305884815b5cc88 299 Gene3D G3DSA:1.10.10.10 1 86 1.6E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS20125 71629052724381763305884815b5cc88 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS20125 71629052724381763305884815b5cc88 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS20125 71629052724381763305884815b5cc88 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS20125 71629052724381763305884815b5cc88 299 Gene3D G3DSA:3.40.190.10 87 177 1.0E-18 T 28-03-2018 AL549_RS23670 0d883ca8ee57a6a3cce3b0ba71f7cb1b 626 Gene3D G3DSA:3.30.450.20 332 460 3.1E-19 T 28-03-2018 AL549_RS23670 0d883ca8ee57a6a3cce3b0ba71f7cb1b 626 Gene3D G3DSA:3.30.70.270 461 620 6.3E-45 T 28-03-2018 AL549_RS23670 0d883ca8ee57a6a3cce3b0ba71f7cb1b 626 Gene3D G3DSA:3.30.450.20 211 298 1.6E-16 T 28-03-2018 AL549_RS23670 0d883ca8ee57a6a3cce3b0ba71f7cb1b 626 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 344 461 4.0E-11 T 28-03-2018 IPR000014 PAS domain AL549_RS23670 0d883ca8ee57a6a3cce3b0ba71f7cb1b 626 Gene3D G3DSA:3.30.450.20 73 205 4.3E-27 T 28-03-2018 AL549_RS23670 0d883ca8ee57a6a3cce3b0ba71f7cb1b 626 SUPERFAMILY SSF55785 352 462 1.92E-15 T 28-03-2018 IPR000014 PAS domain AL549_RS23670 0d883ca8ee57a6a3cce3b0ba71f7cb1b 626 SUPERFAMILY SSF103190 207 298 3.06E-22 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL549_RS23670 0d883ca8ee57a6a3cce3b0ba71f7cb1b 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 467 615 1.9E-36 T 28-03-2018 IPR000160 GGDEF domain AL549_RS23670 0d883ca8ee57a6a3cce3b0ba71f7cb1b 626 SUPERFAMILY SSF103190 36 206 4.79E-42 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL549_RS23670 0d883ca8ee57a6a3cce3b0ba71f7cb1b 626 Gene3D G3DSA:1.20.5.170 27 72 8.5E-20 T 28-03-2018 AL549_RS23670 0d883ca8ee57a6a3cce3b0ba71f7cb1b 626 SMART SM00267 454 619 4.5E-46 T 28-03-2018 IPR000160 GGDEF domain AL549_RS23670 0d883ca8ee57a6a3cce3b0ba71f7cb1b 626 SMART SM00091 340 407 0.0047 T 28-03-2018 IPR000014 PAS domain AL549_RS23670 0d883ca8ee57a6a3cce3b0ba71f7cb1b 626 Pfam PF13426 PAS domain 352 452 2.2E-8 T 28-03-2018 IPR000014 PAS domain AL549_RS23670 0d883ca8ee57a6a3cce3b0ba71f7cb1b 626 SUPERFAMILY SSF55073 470 618 8.63E-37 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS23670 0d883ca8ee57a6a3cce3b0ba71f7cb1b 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 462 617 1.4E-39 T 28-03-2018 IPR000160 GGDEF domain AL549_RS01045 bfd7322b1b6520fd828b1d8fb99c4813 198 SMART SM00357 4 68 1.4E-6 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AL549_RS01045 bfd7322b1b6520fd828b1d8fb99c4813 198 Pfam PF00313 'Cold-shock' DNA-binding domain 4 66 3.6E-11 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL549_RS01045 bfd7322b1b6520fd828b1d8fb99c4813 198 Pfam PF06961 Protein of unknown function (DUF1294) 108 162 1.4E-23 T 28-03-2018 IPR010718 Protein of unknown function DUF1294 AL549_RS01045 bfd7322b1b6520fd828b1d8fb99c4813 198 Gene3D G3DSA:2.40.50.140 1 72 1.8E-15 T 28-03-2018 AL549_RS01045 bfd7322b1b6520fd828b1d8fb99c4813 198 SUPERFAMILY SSF50249 3 69 5.63E-14 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS09545 3b6f42efc6dc4e81a2d3bbf3e5938514 142 SUPERFAMILY SSF54197 3 133 1.91E-34 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL549_RS09545 3b6f42efc6dc4e81a2d3bbf3e5938514 142 PIRSF PIRSF000714 2 141 7.8E-54 T 28-03-2018 IPR026026 Histidine triad hydrolase, Hint-type AL549_RS09545 3b6f42efc6dc4e81a2d3bbf3e5938514 142 Gene3D G3DSA:3.30.428.10 1 135 7.1E-25 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL549_RS09545 3b6f42efc6dc4e81a2d3bbf3e5938514 142 Pfam PF01230 HIT domain 11 99 2.6E-19 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AL549_RS16930 d1d08c5b9524ed1148f65652d1a0d610 138 Gene3D G3DSA:3.10.580.10 1 137 6.3E-30 T 28-03-2018 AL549_RS16930 d1d08c5b9524ed1148f65652d1a0d610 138 SMART SM00116 80 127 5.2E-7 T 28-03-2018 IPR000644 CBS domain AL549_RS16930 d1d08c5b9524ed1148f65652d1a0d610 138 SMART SM00116 13 61 1.4 T 28-03-2018 IPR000644 CBS domain AL549_RS16930 d1d08c5b9524ed1148f65652d1a0d610 138 Pfam PF00571 CBS domain 6 61 5.2E-6 T 28-03-2018 IPR000644 CBS domain AL549_RS16930 d1d08c5b9524ed1148f65652d1a0d610 138 Pfam PF00571 CBS domain 73 126 1.3E-11 T 28-03-2018 IPR000644 CBS domain AL549_RS16930 d1d08c5b9524ed1148f65652d1a0d610 138 SUPERFAMILY SSF54631 2 126 3.79E-30 T 28-03-2018 AL549_RS23380 aca61c36d60fd7e287cb9e71da71a99c 453 Gene3D G3DSA:3.90.190.20 314 453 4.5E-25 T 28-03-2018 AL549_RS23380 aca61c36d60fd7e287cb9e71da71a99c 453 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 448 6.0E-260 T 28-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 AL549_RS23380 aca61c36d60fd7e287cb9e71da71a99c 453 Gene3D G3DSA:3.40.1190.10 91 313 3.2E-41 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL549_RS23380 aca61c36d60fd7e287cb9e71da71a99c 453 SUPERFAMILY SSF53244 311 448 5.65E-36 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL549_RS23380 aca61c36d60fd7e287cb9e71da71a99c 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 388 6.1E-12 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL549_RS23380 aca61c36d60fd7e287cb9e71da71a99c 453 SUPERFAMILY SSF53623 97 308 1.83E-53 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL549_RS23380 aca61c36d60fd7e287cb9e71da71a99c 453 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 58.955 T 28-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 AL549_RS23380 aca61c36d60fd7e287cb9e71da71a99c 453 Pfam PF01225 Mur ligase family, catalytic domain 2 101 1.2E-19 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL549_RS23380 aca61c36d60fd7e287cb9e71da71a99c 453 Pfam PF08245 Mur ligase middle domain 108 291 2.3E-21 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL549_RS23380 aca61c36d60fd7e287cb9e71da71a99c 453 Gene3D G3DSA:3.40.50.720 1 90 3.0E-11 T 28-03-2018 AL549_RS23380 aca61c36d60fd7e287cb9e71da71a99c 453 SUPERFAMILY SSF51984 1 89 3.66E-23 T 28-03-2018 AL549_RS23255 0c031d871e6870f199ffa9de63e7425a 196 Pfam PF08525 Opacity-associated protein A N-terminal motif 45 72 9.2E-9 T 28-03-2018 IPR013731 Opacity-associated protein A, N-terminal AL549_RS23255 0c031d871e6870f199ffa9de63e7425a 196 Pfam PF04225 Opacity-associated protein A LysM-like domain 112 196 9.2E-39 T 28-03-2018 IPR007340 Opacity-associated protein A AL549_RS01145 0bd80d376a877a7ee9e1e1c423f424ff 621 SUPERFAMILY SSF52794 525 618 2.96E-28 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS01145 0bd80d376a877a7ee9e1e1c423f424ff 621 SUPERFAMILY SSF55804 3 146 2.35E-37 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS01145 0bd80d376a877a7ee9e1e1c423f424ff 621 Pfam PF02378 Phosphotransferase system, EIIC 188 446 7.8E-13 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL549_RS01145 0bd80d376a877a7ee9e1e1c423f424ff 621 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 528 610 7.3E-28 T 28-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AL549_RS01145 0bd80d376a877a7ee9e1e1c423f424ff 621 Gene3D G3DSA:3.40.930.10 1 150 1.2E-36 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS01145 0bd80d376a877a7ee9e1e1c423f424ff 621 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 133 1.4E-38 T 28-03-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 AL549_RS01145 0bd80d376a877a7ee9e1e1c423f424ff 621 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 528 618 9.5E-16 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS01145 0bd80d376a877a7ee9e1e1c423f424ff 621 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 146 1.0E-33 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AL549_RS01145 0bd80d376a877a7ee9e1e1c423f424ff 621 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 175 496 1.9E-78 T 28-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AL549_RS01145 0bd80d376a877a7ee9e1e1c423f424ff 621 Gene3D G3DSA:3.40.50.2300 525 621 1.2E-32 T 28-03-2018 AL549_RS01970 3826a3e64d456ead198bd32ee2f91213 84 Pfam PF13466 STAS domain 6 80 1.3E-10 T 28-03-2018 IPR002645 STAS domain AL549_RS01970 3826a3e64d456ead198bd32ee2f91213 84 Gene3D G3DSA:3.30.750.24 3 82 5.3E-5 T 28-03-2018 IPR002645 STAS domain AL549_RS01970 3826a3e64d456ead198bd32ee2f91213 84 SUPERFAMILY SSF52091 5 81 3.73E-10 T 28-03-2018 IPR002645 STAS domain AL549_RS02300 2da6f5779037771a10037b6373387573 353 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 185 347 3.9E-63 T 28-03-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AL549_RS02300 2da6f5779037771a10037b6373387573 353 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 3 347 5.5E-178 T 28-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AL549_RS02300 2da6f5779037771a10037b6373387573 353 Gene3D G3DSA:3.30.428.10 166 348 2.5E-52 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL549_RS02300 2da6f5779037771a10037b6373387573 353 PIRSF PIRSF000808 1 343 2.1E-122 T 28-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AL549_RS02300 2da6f5779037771a10037b6373387573 353 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 152 169 - T 28-03-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AL549_RS02300 2da6f5779037771a10037b6373387573 353 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 177 6.2E-69 T 28-03-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AL549_RS02300 2da6f5779037771a10037b6373387573 353 SUPERFAMILY SSF54197 5 177 5.67E-72 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL549_RS02300 2da6f5779037771a10037b6373387573 353 SUPERFAMILY SSF54197 180 346 3.57E-51 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL549_RS02300 2da6f5779037771a10037b6373387573 353 Gene3D G3DSA:3.30.428.10 46 165 2.6E-48 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL549_RS10950 044e768c1834607c5fc986dd0b0712c8 257 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 11 252 3.0E-117 T 28-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AL549_RS10950 044e768c1834607c5fc986dd0b0712c8 257 Gene3D G3DSA:1.20.1260.10 7 257 1.8E-73 T 28-03-2018 IPR012347 Ferritin-related AL549_RS10950 044e768c1834607c5fc986dd0b0712c8 257 PIRSF PIRSF020736 2 257 9.4E-91 T 28-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AL549_RS10950 044e768c1834607c5fc986dd0b0712c8 257 SUPERFAMILY SSF47240 11 61 1.08E-73 T 28-03-2018 IPR009078 Ferritin-like superfamily AL549_RS10950 044e768c1834607c5fc986dd0b0712c8 257 SUPERFAMILY SSF47240 109 255 1.08E-73 T 28-03-2018 IPR009078 Ferritin-like superfamily AL549_RS23595 5fc00da2d26ba34e6ff1b53b447fea02 428 Gene3D G3DSA:1.10.4030.10 21 147 3.0E-20 T 28-03-2018 AL549_RS23595 5fc00da2d26ba34e6ff1b53b447fea02 428 Pfam PF00639 PPIC-type PPIASE domain 284 375 1.7E-21 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AL549_RS23595 5fc00da2d26ba34e6ff1b53b447fea02 428 Hamap MF_01183 Chaperone SurA [surA]. 8 423 32.296 T 28-03-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 AL549_RS23595 5fc00da2d26ba34e6ff1b53b447fea02 428 Gene3D G3DSA:3.10.50.40 166 275 9.0E-23 T 28-03-2018 AL549_RS23595 5fc00da2d26ba34e6ff1b53b447fea02 428 SUPERFAMILY SSF109998 24 197 8.76E-38 T 28-03-2018 IPR027304 Trigger factor/SurA domain AL549_RS23595 5fc00da2d26ba34e6ff1b53b447fea02 428 SUPERFAMILY SSF54534 172 270 2.16E-24 T 28-03-2018 AL549_RS23595 5fc00da2d26ba34e6ff1b53b447fea02 428 Gene3D G3DSA:3.10.50.40 276 381 1.9E-28 T 28-03-2018 AL549_RS23595 5fc00da2d26ba34e6ff1b53b447fea02 428 SUPERFAMILY SSF54534 278 380 5.89E-29 T 28-03-2018 AL549_RS23595 5fc00da2d26ba34e6ff1b53b447fea02 428 Pfam PF13616 PPIC-type PPIASE domain 163 269 1.5E-20 T 28-03-2018 AL549_RS23595 5fc00da2d26ba34e6ff1b53b447fea02 428 Pfam PF09312 SurA N-terminal domain 24 141 5.1E-44 T 28-03-2018 IPR015391 SurA N-terminal AL549_RS05840 7750e93aa9f7614a981c1e94148a4980 563 Gene3D G3DSA:3.40.190.10 258 312 2.2E-8 T 28-03-2018 AL549_RS05840 7750e93aa9f7614a981c1e94148a4980 563 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 2.7E-20 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL549_RS05840 7750e93aa9f7614a981c1e94148a4980 563 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 6.2E-39 T 28-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AL549_RS05840 7750e93aa9f7614a981c1e94148a4980 563 Gene3D G3DSA:3.90.76.10 130 257 2.9E-16 T 28-03-2018 AL549_RS05840 7750e93aa9f7614a981c1e94148a4980 563 SUPERFAMILY SSF53850 120 557 5.61E-57 T 28-03-2018 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 7.8E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 Gene3D G3DSA:3.40.50.670 403 802 2.5E-109 T 28-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 SMART SM00387 31 175 1.2E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 8.1E-86 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 8.1E-86 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 8.1E-86 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 8.1E-86 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 8.1E-86 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 8.1E-86 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 8.1E-86 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 8.1E-86 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 8.1E-86 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 8.1E-86 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 8.1E-86 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 SUPERFAMILY SSF56719 395 561 7.32E-88 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 SUPERFAMILY SSF56719 731 796 7.32E-88 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 SMART SM00433 35 798 1.9E-273 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 Gene3D G3DSA:3.30.565.10 17 220 2.1E-76 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 734 794 4.6E-30 T 28-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 28-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 Gene3D G3DSA:3.30.230.10 221 393 3.8E-65 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 SUPERFAMILY SSF55874 4 213 2.36E-75 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 108.84 T 28-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 SUPERFAMILY SSF54211 221 393 4.93E-59 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 7.5E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 7.5E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 7.5E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 7.5E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 7.5E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 7.5E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 7.5E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 7.5E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 7.5E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 28-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 Pfam PF00204 DNA gyrase B 221 391 2.8E-61 T 28-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS21715 e1a194f19525d61e71f4636aff9e3607 805 Pfam PF01751 Toprim domain 420 532 8.5E-19 T 28-03-2018 IPR006171 TOPRIM domain AL549_RS05775 f1ef80bd10906cbb07ecd9e409b322fa 225 Gene3D G3DSA:3.40.50.300 2 225 4.6E-63 T 28-03-2018 AL549_RS05775 f1ef80bd10906cbb07ecd9e409b322fa 225 SUPERFAMILY SSF52540 5 224 3.17E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS05775 f1ef80bd10906cbb07ecd9e409b322fa 225 SMART SM00382 34 220 2.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS05775 f1ef80bd10906cbb07ecd9e409b322fa 225 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS05775 f1ef80bd10906cbb07ecd9e409b322fa 225 Pfam PF00005 ABC transporter 25 171 1.0E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS17765 46cc558686a7f57cb38c500bc1ec93b3 1159 Pfam PF02811 PHP domain 8 171 9.2E-43 T 28-03-2018 IPR004013 PHP domain GO:0003824 AL549_RS17765 46cc558686a7f57cb38c500bc1ec93b3 1159 SUPERFAMILY SSF89550 5 263 6.87E-14 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL549_RS17765 46cc558686a7f57cb38c500bc1ec93b3 1159 Gene3D G3DSA:2.40.50.140 973 1073 6.7E-18 T 28-03-2018 AL549_RS17765 46cc558686a7f57cb38c500bc1ec93b3 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 1.3E-175 T 28-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS17765 46cc558686a7f57cb38c500bc1ec93b3 1159 Gene3D G3DSA:1.10.150.280 780 894 2.4E-10 T 28-03-2018 AL549_RS17765 46cc558686a7f57cb38c500bc1ec93b3 1159 Pfam PF01336 OB-fold nucleic acid binding domain 999 1071 3.0E-10 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL549_RS17765 46cc558686a7f57cb38c500bc1ec93b3 1159 SUPERFAMILY SSF50249 978 1066 5.31E-5 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS17765 46cc558686a7f57cb38c500bc1ec93b3 1159 Gene3D G3DSA:3.20.20.140 1 246 2.3E-36 T 28-03-2018 AL549_RS17765 46cc558686a7f57cb38c500bc1ec93b3 1159 SMART SM00481 7 74 2.1E-26 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL549_RS17765 46cc558686a7f57cb38c500bc1ec93b3 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 7.7E-26 T 28-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS17765 46cc558686a7f57cb38c500bc1ec93b3 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 28-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS03405 7df01d535f6ea0e38fdd7b6f4902e898 422 Pfam PF00579 tRNA synthetases class I (W and Y) 32 326 5.5E-83 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS03405 7df01d535f6ea0e38fdd7b6f4902e898 422 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 419 43.145 T 28-03-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 AL549_RS03405 7df01d535f6ea0e38fdd7b6f4902e898 422 Gene3D G3DSA:1.10.240.10 227 320 6.7E-32 T 28-03-2018 AL549_RS03405 7df01d535f6ea0e38fdd7b6f4902e898 422 Gene3D G3DSA:3.40.50.620 7 226 8.3E-67 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS03405 7df01d535f6ea0e38fdd7b6f4902e898 422 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS03405 7df01d535f6ea0e38fdd7b6f4902e898 422 SUPERFAMILY SSF52374 7 326 9.25E-100 T 28-03-2018 AL549_RS03405 7df01d535f6ea0e38fdd7b6f4902e898 422 Pfam PF01479 S4 domain 359 388 6.7E-7 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS03405 7df01d535f6ea0e38fdd7b6f4902e898 422 Gene3D G3DSA:3.10.290.10 321 422 1.7E-14 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS03405 7df01d535f6ea0e38fdd7b6f4902e898 422 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 5 418 1.1E-118 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL549_RS03405 7df01d535f6ea0e38fdd7b6f4902e898 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 186 208 3.7E-30 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL549_RS03405 7df01d535f6ea0e38fdd7b6f4902e898 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 165 180 3.7E-30 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL549_RS03405 7df01d535f6ea0e38fdd7b6f4902e898 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 3.7E-30 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL549_RS03405 7df01d535f6ea0e38fdd7b6f4902e898 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 219 231 3.7E-30 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL549_RS03405 7df01d535f6ea0e38fdd7b6f4902e898 422 SUPERFAMILY SSF55174 324 418 2.22E-14 T 28-03-2018 AL549_RS04325 aedccae6abfec918bf8c4422f53730cc 365 Gene3D G3DSA:3.40.1710.10 40 185 3.2E-18 T 28-03-2018 AL549_RS04325 aedccae6abfec918bf8c4422f53730cc 365 Pfam PF12698 ABC-2 family transporter protein 25 356 2.5E-49 T 28-03-2018 AL549_RS04325 aedccae6abfec918bf8c4422f53730cc 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 307 326 2.6E-8 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL549_RS04325 aedccae6abfec918bf8c4422f53730cc 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 250 274 2.6E-8 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL549_RS04325 aedccae6abfec918bf8c4422f53730cc 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 287 306 2.6E-8 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL549_RS02665 7d95292b6a8c4aa061543b806c6dbbbd 151 SUPERFAMILY SSF53062 1 126 4.84E-34 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AL549_RS02665 7d95292b6a8c4aa061543b806c6dbbbd 151 Pfam PF03610 PTS system fructose IIA component 4 116 1.1E-30 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AL549_RS02665 7d95292b6a8c4aa061543b806c6dbbbd 151 Gene3D G3DSA:3.40.50.510 1 144 3.1E-34 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AL549_RS10995 a9ae4028f5c5ba540c416f60744b7ea2 435 Gene3D G3DSA:1.10.287.40 2 106 1.3E-22 T 28-03-2018 AL549_RS10995 a9ae4028f5c5ba540c416f60744b7ea2 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 2.6E-171 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL549_RS10995 a9ae4028f5c5ba540c416f60744b7ea2 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 4.5E-29 T 28-03-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 AL549_RS10995 a9ae4028f5c5ba540c416f60744b7ea2 435 SUPERFAMILY SSF55681 118 429 1.49E-97 T 28-03-2018 AL549_RS10995 a9ae4028f5c5ba540c416f60744b7ea2 435 SUPERFAMILY SSF46589 1 114 2.56E-27 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 AL549_RS10995 a9ae4028f5c5ba540c416f60744b7ea2 435 PIRSF PIRSF001529 1 435 2.3E-186 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL549_RS10995 a9ae4028f5c5ba540c416f60744b7ea2 435 Gene3D G3DSA:3.30.930.10 107 435 2.1E-93 T 28-03-2018 AL549_RS10995 a9ae4028f5c5ba540c416f60744b7ea2 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 9.8E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL549_RS10995 a9ae4028f5c5ba540c416f60744b7ea2 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 9.8E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL549_RS10995 a9ae4028f5c5ba540c416f60744b7ea2 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 9.8E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL549_RS10995 a9ae4028f5c5ba540c416f60744b7ea2 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 9.8E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL549_RS10995 a9ae4028f5c5ba540c416f60744b7ea2 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 9.8E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL549_RS10995 a9ae4028f5c5ba540c416f60744b7ea2 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 230 411 1.5E-34 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS10995 a9ae4028f5c5ba540c416f60744b7ea2 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.042 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL549_RS04000 71e1abcc7aee251dccaf197b13341b5b 219 Gene3D G3DSA:2.30.110.10 13 112 4.8E-14 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL549_RS04000 71e1abcc7aee251dccaf197b13341b5b 219 SUPERFAMILY SSF141371 114 215 1.37E-20 T 28-03-2018 AL549_RS04000 71e1abcc7aee251dccaf197b13341b5b 219 SUPERFAMILY SSF141371 2 113 1.29E-23 T 28-03-2018 AL549_RS04000 71e1abcc7aee251dccaf197b13341b5b 219 Gene3D G3DSA:2.40.10.220 113 215 8.3E-13 T 28-03-2018 AL549_RS04000 71e1abcc7aee251dccaf197b13341b5b 219 Pfam PF07238 PilZ domain 112 198 1.9E-12 T 28-03-2018 IPR009875 PilZ domain GO:0035438 AL549_RS04000 71e1abcc7aee251dccaf197b13341b5b 219 Pfam PF12945 Flagellar protein YcgR 15 103 2.4E-9 T 28-03-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AL549_RS11995 ff849afb8b82fd89b9bd08f9df0281e0 159 Gene3D G3DSA:3.40.630.30 1 157 1.1E-28 T 28-03-2018 AL549_RS11995 ff849afb8b82fd89b9bd08f9df0281e0 159 Pfam PF00583 Acetyltransferase (GNAT) family 30 146 5.2E-18 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS11995 ff849afb8b82fd89b9bd08f9df0281e0 159 SUPERFAMILY SSF55729 5 149 8.81E-28 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS09340 621394ab496a441b5cf8cd4661d96062 634 SUPERFAMILY SSF110942 520 632 1.09E-33 T 28-03-2018 AL549_RS09340 621394ab496a441b5cf8cd4661d96062 634 SMART SM00387 32 189 3.6E-5 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS09340 621394ab496a441b5cf8cd4661d96062 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 2.3E-62 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL549_RS09340 621394ab496a441b5cf8cd4661d96062 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 2.3E-62 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL549_RS09340 621394ab496a441b5cf8cd4661d96062 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 2.3E-62 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL549_RS09340 621394ab496a441b5cf8cd4661d96062 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 2.3E-62 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL549_RS09340 621394ab496a441b5cf8cd4661d96062 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 2.3E-62 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL549_RS09340 621394ab496a441b5cf8cd4661d96062 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 2.3E-62 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL549_RS09340 621394ab496a441b5cf8cd4661d96062 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 2.3E-62 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL549_RS09340 621394ab496a441b5cf8cd4661d96062 634 PIRSF PIRSF002583 1 634 1.2E-214 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AL549_RS09340 621394ab496a441b5cf8cd4661d96062 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 28-03-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 AL549_RS09340 621394ab496a441b5cf8cd4661d96062 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 187 8.2E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS09340 621394ab496a441b5cf8cd4661d96062 634 SUPERFAMILY SSF54211 238 493 5.08E-100 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS09340 621394ab496a441b5cf8cd4661d96062 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.278 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AL549_RS09340 621394ab496a441b5cf8cd4661d96062 634 SUPERFAMILY SSF55874 10 217 5.76E-64 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS09340 621394ab496a441b5cf8cd4661d96062 634 Pfam PF00183 Hsp90 protein 226 633 2.7E-128 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AL549_RS09340 621394ab496a441b5cf8cd4661d96062 634 Gene3D G3DSA:3.30.565.10 34 229 9.1E-50 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS23420 f1946be24cee3d343e9c37116bc1a2f4 91 Pfam PF00381 PTS HPr component phosphorylation site 4 84 2.6E-25 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS23420 f1946be24cee3d343e9c37116bc1a2f4 91 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 28-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AL549_RS23420 f1946be24cee3d343e9c37116bc1a2f4 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 7.8E-10 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS23420 f1946be24cee3d343e9c37116bc1a2f4 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 7.8E-10 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS23420 f1946be24cee3d343e9c37116bc1a2f4 91 PRINTS PR00107 Phosphocarrier protein signature 14 30 7.8E-10 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS23420 f1946be24cee3d343e9c37116bc1a2f4 91 Gene3D G3DSA:3.30.1340.10 3 88 7.6E-26 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS23420 f1946be24cee3d343e9c37116bc1a2f4 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 84 1.4E-23 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS23420 f1946be24cee3d343e9c37116bc1a2f4 91 SUPERFAMILY SSF55594 4 90 5.36E-26 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS23420 f1946be24cee3d343e9c37116bc1a2f4 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL549_RS00670 fb9d3817d8bb71ccc2b8407ffb097c16 344 Gene3D G3DSA:3.40.190.10 14 144 8.4E-20 T 28-03-2018 AL549_RS00670 fb9d3817d8bb71ccc2b8407ffb097c16 344 SUPERFAMILY SSF53850 24 341 1.72E-90 T 28-03-2018 AL549_RS00670 fb9d3817d8bb71ccc2b8407ffb097c16 344 Gene3D G3DSA:3.40.190.10 145 283 7.6E-38 T 28-03-2018 AL549_RS00670 fb9d3817d8bb71ccc2b8407ffb097c16 344 Pfam PF13416 Bacterial extracellular solute-binding protein 40 310 3.3E-39 T 28-03-2018 AL549_RS00670 fb9d3817d8bb71ccc2b8407ffb097c16 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 244 263 2.0E-63 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS00670 fb9d3817d8bb71ccc2b8407ffb097c16 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 66 2.0E-63 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS00670 fb9d3817d8bb71ccc2b8407ffb097c16 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 200 219 2.0E-63 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS00670 fb9d3817d8bb71ccc2b8407ffb097c16 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 2.0E-63 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS00670 fb9d3817d8bb71ccc2b8407ffb097c16 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 2.0E-63 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS00670 fb9d3817d8bb71ccc2b8407ffb097c16 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 289 315 2.0E-63 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS00670 fb9d3817d8bb71ccc2b8407ffb097c16 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 163 182 2.0E-63 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS00670 fb9d3817d8bb71ccc2b8407ffb097c16 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 2.0E-63 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS00670 fb9d3817d8bb71ccc2b8407ffb097c16 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 145 159 2.0E-63 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS00670 fb9d3817d8bb71ccc2b8407ffb097c16 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 2.0E-63 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS00670 fb9d3817d8bb71ccc2b8407ffb097c16 344 PIRSF PIRSF019574 1 344 6.2E-112 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS18475 e1cb512dc7e22137d702acf3f3e0cbe7 687 Gene3D G3DSA:3.30.70.270 235 405 3.0E-57 T 28-03-2018 AL549_RS18475 e1cb512dc7e22137d702acf3f3e0cbe7 687 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 238 400 1.8E-42 T 28-03-2018 IPR000160 GGDEF domain AL549_RS18475 e1cb512dc7e22137d702acf3f3e0cbe7 687 SMART SM00267 231 402 2.6E-62 T 28-03-2018 IPR000160 GGDEF domain AL549_RS18475 e1cb512dc7e22137d702acf3f3e0cbe7 687 SUPERFAMILY SSF55073 247 404 8.63E-48 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS18475 e1cb512dc7e22137d702acf3f3e0cbe7 687 Pfam PF00990 Diguanylate cyclase, GGDEF domain 242 398 3.6E-46 T 28-03-2018 IPR000160 GGDEF domain AL549_RS18475 e1cb512dc7e22137d702acf3f3e0cbe7 687 SMART SM00052 412 660 7.2E-107 T 28-03-2018 IPR001633 EAL domain AL549_RS18475 e1cb512dc7e22137d702acf3f3e0cbe7 687 Pfam PF00563 EAL domain 420 655 2.4E-74 T 28-03-2018 IPR001633 EAL domain AL549_RS18475 e1cb512dc7e22137d702acf3f3e0cbe7 687 SUPERFAMILY SSF141868 418 668 2.48E-89 T 28-03-2018 IPR001633 EAL domain AL549_RS18475 e1cb512dc7e22137d702acf3f3e0cbe7 687 Gene3D G3DSA:3.20.20.450 406 674 1.3E-99 T 28-03-2018 IPR001633 EAL domain AL549_RS08080 e218e50f165e256e73d344aade0fac92 432 Gene3D G3DSA:1.10.287.130 211 255 9.0E-16 T 28-03-2018 AL549_RS08080 e218e50f165e256e73d344aade0fac92 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 4.2E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS08080 e218e50f165e256e73d344aade0fac92 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 4.2E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS08080 e218e50f165e256e73d344aade0fac92 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 4.2E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS08080 e218e50f165e256e73d344aade0fac92 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 4.2E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS08080 e218e50f165e256e73d344aade0fac92 432 SUPERFAMILY SSF55785 86 197 1.08E-11 T 28-03-2018 IPR000014 PAS domain AL549_RS08080 e218e50f165e256e73d344aade0fac92 432 Gene3D G3DSA:3.30.565.10 256 428 3.4E-40 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS08080 e218e50f165e256e73d344aade0fac92 432 Pfam PF00989 PAS fold 99 187 2.0E-7 T 28-03-2018 IPR013767 PAS fold GO:0006355 AL549_RS08080 e218e50f165e256e73d344aade0fac92 432 SMART SM00091 98 164 1.7E-5 T 28-03-2018 IPR000014 PAS domain AL549_RS08080 e218e50f165e256e73d344aade0fac92 432 Gene3D G3DSA:3.30.450.20 97 210 4.0E-15 T 28-03-2018 AL549_RS08080 e218e50f165e256e73d344aade0fac92 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 1.6E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS08080 e218e50f165e256e73d344aade0fac92 432 SUPERFAMILY SSF47384 192 272 1.31E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS08080 e218e50f165e256e73d344aade0fac92 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 427 4.7E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS08080 e218e50f165e256e73d344aade0fac92 432 SMART SM00388 205 272 1.2E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS08080 e218e50f165e256e73d344aade0fac92 432 SMART SM00387 317 429 5.3E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS08080 e218e50f165e256e73d344aade0fac92 432 SUPERFAMILY SSF55874 261 427 2.62E-40 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS08080 e218e50f165e256e73d344aade0fac92 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 4.6E-138 T 28-03-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL549_RS08080 e218e50f165e256e73d344aade0fac92 432 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 5.1E-31 T 28-03-2018 IPR021766 Protein of unknown function DUF3329 GO:0004673 AL549_RS13810 cf661b44df894646ef71eef7d7699964 228 Gene3D G3DSA:3.40.50.10140 94 227 7.9E-19 T 28-03-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AL549_RS13810 cf661b44df894646ef71eef7d7699964 228 SUPERFAMILY SSF52200 90 205 1.03E-17 T 28-03-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AL549_RS13810 cf661b44df894646ef71eef7d7699964 228 Pfam PF13676 TIR domain 98 206 2.3E-14 T 28-03-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AL549_RS15480 75f8a98578aa783dfec46bd1493a0e33 371 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 362 5.5E-42 T 28-03-2018 IPR000160 GGDEF domain AL549_RS15480 75f8a98578aa783dfec46bd1493a0e33 371 Pfam PF01814 Hemerythrin HHE cation binding domain 13 128 5.1E-8 T 28-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AL549_RS15480 75f8a98578aa783dfec46bd1493a0e33 371 ProSitePatterns PS00550 Hemerythrin family signature. 59 84 - T 28-03-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 AL549_RS15480 75f8a98578aa783dfec46bd1493a0e33 371 SUPERFAMILY SSF55073 211 365 3.92E-43 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS15480 75f8a98578aa783dfec46bd1493a0e33 371 Gene3D G3DSA:3.30.70.270 199 370 3.2E-48 T 28-03-2018 AL549_RS15480 75f8a98578aa783dfec46bd1493a0e33 371 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 131 3.2E-31 T 28-03-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AL549_RS15480 75f8a98578aa783dfec46bd1493a0e33 371 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 366 8.6E-46 T 28-03-2018 IPR000160 GGDEF domain AL549_RS15480 75f8a98578aa783dfec46bd1493a0e33 371 SUPERFAMILY SSF47188 3 131 2.35E-27 T 28-03-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AL549_RS15480 75f8a98578aa783dfec46bd1493a0e33 371 SMART SM00267 195 367 1.8E-49 T 28-03-2018 IPR000160 GGDEF domain AL549_RS15480 75f8a98578aa783dfec46bd1493a0e33 371 Gene3D G3DSA:1.20.120.50 1 132 1.7E-30 T 28-03-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AL549_RS08500 b685da042b9af6ef9dbfc6b0d95f36ff 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 15 40 1.9E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS08500 b685da042b9af6ef9dbfc6b0d95f36ff 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 38 5.3E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS08500 b685da042b9af6ef9dbfc6b0d95f36ff 147 Gene3D G3DSA:3.30.700.10 21 147 8.6E-19 T 28-03-2018 AL549_RS08500 b685da042b9af6ef9dbfc6b0d95f36ff 147 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 41 125 4.6E-17 T 28-03-2018 IPR031982 Type IV minor pilin ComP AL549_RS08500 b685da042b9af6ef9dbfc6b0d95f36ff 147 SUPERFAMILY SSF54523 20 122 1.99E-17 T 28-03-2018 AL549_RS08500 b685da042b9af6ef9dbfc6b0d95f36ff 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 18 38 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS23285 3c299c74ea82d68fe276df747e0ca3d3 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.0E-163 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL549_RS23285 3c299c74ea82d68fe276df747e0ca3d3 302 Gene3D G3DSA:3.40.50.620 2 300 2.2E-42 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS23285 3c299c74ea82d68fe276df747e0ca3d3 302 SUPERFAMILY SSF52402 6 209 2.0E-74 T 28-03-2018 AL549_RS23285 3c299c74ea82d68fe276df747e0ca3d3 302 PIRSF PIRSF002936 1 302 1.2E-156 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL549_RS23285 3c299c74ea82d68fe276df747e0ca3d3 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.02 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL549_RS23285 3c299c74ea82d68fe276df747e0ca3d3 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 8.6E-65 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AL549_RS08275 7cbb306a1615624d1cc5507f609234d7 374 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 359 7.7E-161 T 28-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL549_RS08275 7cbb306a1615624d1cc5507f609234d7 374 SUPERFAMILY SSF102114 105 332 1.7E-12 T 28-03-2018 AL549_RS08275 7cbb306a1615624d1cc5507f609234d7 374 Gene3D G3DSA:3.20.20.70 16 349 2.1E-42 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS08275 7cbb306a1615624d1cc5507f609234d7 374 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 72.355 T 28-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL549_RS08275 7cbb306a1615624d1cc5507f609234d7 374 PIRSF PIRSF006004 3 366 4.1E-144 T 28-03-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL549_RS08275 7cbb306a1615624d1cc5507f609234d7 374 Pfam PF04055 Radical SAM superfamily 109 280 7.9E-14 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS14490 b5cdab4b1851e7eed95d88f7d7b9ffe0 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 3.6E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS18035 326e136dd227e1d05ec484dbb779a794 103 PIRSF PIRSF003113 1 99 3.0E-38 T 28-03-2018 IPR002634 BolA protein AL549_RS18035 326e136dd227e1d05ec484dbb779a794 103 Pfam PF01722 BolA-like protein 10 83 3.1E-31 T 28-03-2018 IPR002634 BolA protein AL549_RS18035 326e136dd227e1d05ec484dbb779a794 103 SUPERFAMILY SSF82657 1 88 1.83E-32 T 28-03-2018 IPR002634 BolA protein AL549_RS18035 326e136dd227e1d05ec484dbb779a794 103 Gene3D G3DSA:3.30.300.90 1 90 2.8E-29 T 28-03-2018 AL549_RS03075 009a6f05a3958e47b642b61d6d0b0a98 478 SUPERFAMILY SSF55874 333 475 4.98E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS03075 009a6f05a3958e47b642b61d6d0b0a98 478 SUPERFAMILY SSF47384 259 320 2.16E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS03075 009a6f05a3958e47b642b61d6d0b0a98 478 SMART SM00304 222 274 2.9E-4 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS03075 009a6f05a3958e47b642b61d6d0b0a98 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 2.8E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS03075 009a6f05a3958e47b642b61d6d0b0a98 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 420 2.8E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS03075 009a6f05a3958e47b642b61d6d0b0a98 478 SMART SM00387 372 477 1.8E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS03075 009a6f05a3958e47b642b61d6d0b0a98 478 Gene3D G3DSA:3.30.565.10 293 475 2.2E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS03075 009a6f05a3958e47b642b61d6d0b0a98 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 475 3.7E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS12125 3d398be5079ca6dfcba1e2ce0a9ccaf6 500 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 16 499 4.4E-98 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL549_RS12125 3d398be5079ca6dfcba1e2ce0a9ccaf6 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 298 314 5.3E-44 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL549_RS12125 3d398be5079ca6dfcba1e2ce0a9ccaf6 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 337 356 5.3E-44 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL549_RS12125 3d398be5079ca6dfcba1e2ce0a9ccaf6 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 451 469 5.3E-44 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL549_RS12125 3d398be5079ca6dfcba1e2ce0a9ccaf6 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 251 270 5.3E-44 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL549_RS12125 3d398be5079ca6dfcba1e2ce0a9ccaf6 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 155 175 5.3E-44 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL549_RS12125 3d398be5079ca6dfcba1e2ce0a9ccaf6 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 407 428 5.3E-44 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL549_RS12125 3d398be5079ca6dfcba1e2ce0a9ccaf6 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 271 290 5.3E-44 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL549_RS12125 3d398be5079ca6dfcba1e2ce0a9ccaf6 500 PIRSF PIRSF006615 9 500 3.2E-201 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL549_RS12125 3d398be5079ca6dfcba1e2ce0a9ccaf6 500 Gene3D G3DSA:1.10.1370.10 47 499 6.0E-30 T 28-03-2018 AL549_RS12125 3d398be5079ca6dfcba1e2ce0a9ccaf6 500 SUPERFAMILY SSF55486 10 500 8.67E-119 T 28-03-2018 AL549_RS10550 57a80ea47e8eb2610a2e766da6ef54d9 411 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 2 353 6.0E-80 T 28-03-2018 IPR008135 Competence-induced protein CinA AL549_RS10550 57a80ea47e8eb2610a2e766da6ef54d9 411 Gene3D G3DSA:3.40.980.10 1 171 3.7E-35 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS10550 57a80ea47e8eb2610a2e766da6ef54d9 411 Pfam PF00994 Probable molybdopterin binding domain 4 169 1.1E-29 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS10550 57a80ea47e8eb2610a2e766da6ef54d9 411 SUPERFAMILY SSF53218 2 204 8.25E-34 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS10550 57a80ea47e8eb2610a2e766da6ef54d9 411 SUPERFAMILY SSF142433 251 385 8.63E-6 T 28-03-2018 IPR008136 CinA, C-terminal AL549_RS10550 57a80ea47e8eb2610a2e766da6ef54d9 411 SMART SM00852 4 171 8.4E-29 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS10550 57a80ea47e8eb2610a2e766da6ef54d9 411 Gene3D G3DSA:3.90.950.20 243 389 0.001 T 28-03-2018 AL549_RS10550 57a80ea47e8eb2610a2e766da6ef54d9 411 PIRSF PIRSF006728 1 391 1.3E-109 T 28-03-2018 IPR008135 Competence-induced protein CinA AL549_RS10550 57a80ea47e8eb2610a2e766da6ef54d9 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 166 4.6E-26 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS10550 57a80ea47e8eb2610a2e766da6ef54d9 411 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 411 102.078 T 28-03-2018 IPR008135 Competence-induced protein CinA AL549_RS19395 5c252dd591ce92f9398c2d0bd8b039d7 368 Gene3D G3DSA:3.40.50.300 111 270 2.8E-27 T 28-03-2018 AL549_RS19395 5c252dd591ce92f9398c2d0bd8b039d7 368 Gene3D G3DSA:3.40.50.300 271 345 1.9E-12 T 28-03-2018 AL549_RS19395 5c252dd591ce92f9398c2d0bd8b039d7 368 Gene3D G3DSA:3.30.450.90 1 97 8.7E-18 T 28-03-2018 AL549_RS19395 5c252dd591ce92f9398c2d0bd8b039d7 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 5.8E-127 T 28-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 AL549_RS19395 5c252dd591ce92f9398c2d0bd8b039d7 368 SUPERFAMILY SSF52540 3 334 2.3E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS19395 5c252dd591ce92f9398c2d0bd8b039d7 368 Pfam PF00437 Type II/IV secretion system protein 103 267 7.6E-37 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL549_RS07470 8134a991993596a5793af1985fd21b80 158 SUPERFAMILY SSF101738 4 120 1.22E-49 T 28-03-2018 IPR007481 Stringent starvation protein B AL549_RS07470 8134a991993596a5793af1985fd21b80 158 PIRSF PIRSF005276 3 158 8.5E-63 T 28-03-2018 IPR007481 Stringent starvation protein B AL549_RS07470 8134a991993596a5793af1985fd21b80 158 Pfam PF04386 Stringent starvation protein B 9 158 6.0E-41 T 28-03-2018 IPR007481 Stringent starvation protein B AL549_RS07470 8134a991993596a5793af1985fd21b80 158 Gene3D G3DSA:2.30.30.220 10 107 2.3E-41 T 28-03-2018 IPR007481 Stringent starvation protein B AL549_RS02395 f4d22c3ed1dfd05663b87ee6b4a6d680 308 Gene3D G3DSA:3.40.190.10 89 175 9.2E-15 T 28-03-2018 AL549_RS02395 f4d22c3ed1dfd05663b87ee6b4a6d680 308 Gene3D G3DSA:3.40.190.10 176 264 9.2E-26 T 28-03-2018 AL549_RS02395 f4d22c3ed1dfd05663b87ee6b4a6d680 308 SUPERFAMILY SSF53850 89 303 6.7E-41 T 28-03-2018 AL549_RS02395 f4d22c3ed1dfd05663b87ee6b4a6d680 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.5E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS02395 f4d22c3ed1dfd05663b87ee6b4a6d680 308 SUPERFAMILY SSF46785 4 85 5.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02395 f4d22c3ed1dfd05663b87ee6b4a6d680 308 Pfam PF03466 LysR substrate binding domain 88 301 3.7E-45 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS02395 f4d22c3ed1dfd05663b87ee6b4a6d680 308 Gene3D G3DSA:1.10.10.10 3 84 3.8E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS06190 28a0aa63178880d07052996aa261b5f1 341 Gene3D G3DSA:2.40.50.100 54 119 6.8E-10 T 28-03-2018 AL549_RS06190 28a0aa63178880d07052996aa261b5f1 341 Gene3D G3DSA:1.20.1600.10 183 333 3.7E-14 T 28-03-2018 AL549_RS06190 28a0aa63178880d07052996aa261b5f1 341 SUPERFAMILY SSF111369 52 122 8.89E-8 T 28-03-2018 AL549_RS06190 28a0aa63178880d07052996aa261b5f1 341 Gene3D G3DSA:1.10.287.470 120 174 7.8E-12 T 28-03-2018 AL549_RS06190 28a0aa63178880d07052996aa261b5f1 341 Pfam PF13533 Biotin-lipoyl like 55 99 8.8E-11 T 28-03-2018 AL549_RS06190 28a0aa63178880d07052996aa261b5f1 341 SUPERFAMILY SSF111369 119 174 6.93E-6 T 28-03-2018 AL549_RS06190 28a0aa63178880d07052996aa261b5f1 341 Pfam PF13437 HlyD family secretion protein 209 327 6.3E-15 T 28-03-2018 AL549_RS06190 28a0aa63178880d07052996aa261b5f1 341 SUPERFAMILY SSF111369 186 265 5.89E-12 T 28-03-2018 AL549_RS05585 4b5d5a17063402248eaedb99493751ea 205 Gene3D G3DSA:2.40.70.10 65 192 3.9E-45 T 28-03-2018 IPR021109 Aspartic peptidase domain AL549_RS05585 4b5d5a17063402248eaedb99493751ea 205 Pfam PF05618 Putative ATP-dependant zinc protease 68 202 7.4E-43 T 28-03-2018 AL549_RS05585 4b5d5a17063402248eaedb99493751ea 205 SUPERFAMILY SSF50630 68 199 2.67E-40 T 28-03-2018 IPR021109 Aspartic peptidase domain AL549_RS04945 66c015fcf00d38b04e8d3172b67af1ae 106 Gene3D G3DSA:3.30.70.1240 1 104 5.9E-30 T 28-03-2018 IPR023389 DOPA-like domain AL549_RS04945 66c015fcf00d38b04e8d3172b67af1ae 106 Pfam PF08883 Dopa 4,5-dioxygenase family 2 99 2.0E-27 T 28-03-2018 IPR014980 Dopa 4,5-dioxygenase AL549_RS04945 66c015fcf00d38b04e8d3172b67af1ae 106 PIRSF PIRSF028139 1 106 2.7E-43 T 28-03-2018 IPR014980 Dopa 4,5-dioxygenase AL549_RS04945 66c015fcf00d38b04e8d3172b67af1ae 106 SUPERFAMILY SSF143410 1 103 4.84E-34 T 28-03-2018 IPR023389 DOPA-like domain AL549_RS03765 d9e4e0e6e7c2e238917628d390ddff5a 623 SUPERFAMILY SSF69593 372 617 4.97E-33 T 28-03-2018 AL549_RS03765 d9e4e0e6e7c2e238917628d390ddff5a 623 Gene3D G3DSA:1.20.1250.20 210 414 1.8E-11 T 28-03-2018 AL549_RS03765 d9e4e0e6e7c2e238917628d390ddff5a 623 Pfam PF07690 Major Facilitator Superfamily 47 380 3.2E-14 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS03765 d9e4e0e6e7c2e238917628d390ddff5a 623 SUPERFAMILY SSF103473 40 423 6.8E-23 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS03765 d9e4e0e6e7c2e238917628d390ddff5a 623 SMART SM00563 451 567 3.6E-32 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS03765 d9e4e0e6e7c2e238917628d390ddff5a 623 Gene3D G3DSA:1.20.1250.20 1 202 1.0E-7 T 28-03-2018 AL549_RS03765 d9e4e0e6e7c2e238917628d390ddff5a 623 Gene3D G3DSA:3.40.1130.10 415 619 9.3E-40 T 28-03-2018 AL549_RS03765 d9e4e0e6e7c2e238917628d390ddff5a 623 Pfam PF01553 Acyltransferase 436 564 4.1E-25 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS18595 5e54b0f8cdbd829ae08cafb16bc09115 110 Pfam PF03840 Preprotein translocase SecG subunit 4 71 1.7E-21 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL549_RS18595 5e54b0f8cdbd829ae08cafb16bc09115 110 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.4E-44 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL549_RS18595 5e54b0f8cdbd829ae08cafb16bc09115 110 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.4E-44 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL549_RS18595 5e54b0f8cdbd829ae08cafb16bc09115 110 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.4E-44 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL549_RS18595 5e54b0f8cdbd829ae08cafb16bc09115 110 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.4E-44 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL549_RS18595 5e54b0f8cdbd829ae08cafb16bc09115 110 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 4.8E-25 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL549_RS02855 2d995ed9f0e2bafaea66424fb0cd786b 364 Gene3D G3DSA:1.10.3210.10 122 362 1.7E-47 T 28-03-2018 AL549_RS02855 2d995ed9f0e2bafaea66424fb0cd786b 364 Gene3D G3DSA:3.40.50.2300 4 121 5.2E-34 T 28-03-2018 AL549_RS02855 2d995ed9f0e2bafaea66424fb0cd786b 364 SMART SM00448 9 121 1.3E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS02855 2d995ed9f0e2bafaea66424fb0cd786b 364 Pfam PF00072 Response regulator receiver domain 11 121 1.2E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS02855 2d995ed9f0e2bafaea66424fb0cd786b 364 SUPERFAMILY SSF52172 8 155 3.7E-37 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS02855 2d995ed9f0e2bafaea66424fb0cd786b 364 SMART SM00471 170 321 2.8E-9 T 28-03-2018 IPR003607 HD/PDEase domain AL549_RS02855 2d995ed9f0e2bafaea66424fb0cd786b 364 SUPERFAMILY SSF109604 147 349 7.54E-34 T 28-03-2018 AL549_RS02855 2d995ed9f0e2bafaea66424fb0cd786b 364 Pfam PF13487 HD domain 233 303 2.2E-19 T 28-03-2018 AL549_RS05865 1fd2bb05d31973da5c503e5bcac23622 415 Gene3D G3DSA:2.40.160.60 21 415 4.0E-75 T 28-03-2018 AL549_RS05865 1fd2bb05d31973da5c503e5bcac23622 415 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 414 7.6E-127 T 28-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL549_RS05865 1fd2bb05d31973da5c503e5bcac23622 415 SUPERFAMILY SSF56935 22 414 2.52E-91 T 28-03-2018 AL549_RS15105 3b1b78e679d6f3451bdefb4051a06116 171 SUPERFAMILY SSF55729 2 149 1.06E-33 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS15105 3b1b78e679d6f3451bdefb4051a06116 171 Gene3D G3DSA:3.40.630.30 1 171 3.3E-19 T 28-03-2018 AL549_RS15105 3b1b78e679d6f3451bdefb4051a06116 171 Pfam PF13302 Acetyltransferase (GNAT) domain 9 147 2.3E-26 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS03260 32717dc848944e38ae2dcb0d0ec8b725 242 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 15 242 1.6E-31 T 28-03-2018 IPR009331 Oligogalacturonate-specific porin AL549_RS03260 32717dc848944e38ae2dcb0d0ec8b725 242 Gene3D G3DSA:2.40.160.40 23 242 1.4E-35 T 28-03-2018 AL549_RS03260 32717dc848944e38ae2dcb0d0ec8b725 242 SUPERFAMILY SSF56935 47 186 4.76E-7 T 28-03-2018 AL549_RS06720 858635904e3df0e419b78ffe7ef006ba 171 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL549_RS06720 858635904e3df0e419b78ffe7ef006ba 171 Pfam PF00293 NUDIX domain 33 149 2.6E-17 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL549_RS06720 858635904e3df0e419b78ffe7ef006ba 171 Gene3D G3DSA:3.90.79.10 1 168 8.5E-34 T 28-03-2018 AL549_RS06720 858635904e3df0e419b78ffe7ef006ba 171 SUPERFAMILY SSF55811 2 168 6.5E-42 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL549_RS02210 39911c8c0a4414d6937a87fcfa0c7782 164 SUPERFAMILY SSF46785 4 65 8.27E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02210 39911c8c0a4414d6937a87fcfa0c7782 164 Gene3D G3DSA:1.10.10.10 6 57 2.4E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02210 39911c8c0a4414d6937a87fcfa0c7782 164 SMART SM00344 6 115 2.3E-46 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL549_RS02210 39911c8c0a4414d6937a87fcfa0c7782 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 6.9E-15 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS02210 39911c8c0a4414d6937a87fcfa0c7782 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 6.9E-15 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS02210 39911c8c0a4414d6937a87fcfa0c7782 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 6.9E-15 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS02210 39911c8c0a4414d6937a87fcfa0c7782 164 SUPERFAMILY SSF54909 66 151 1.47E-21 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL549_RS02210 39911c8c0a4414d6937a87fcfa0c7782 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL549_RS02210 39911c8c0a4414d6937a87fcfa0c7782 164 Pfam PF01037 Lrp/AsnC ligand binding domain 72 146 4.5E-23 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL549_RS02210 39911c8c0a4414d6937a87fcfa0c7782 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 2.0E-17 T 28-03-2018 AL549_RS02210 39911c8c0a4414d6937a87fcfa0c7782 164 Gene3D G3DSA:3.30.70.920 59 151 1.5E-27 T 28-03-2018 AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 PIRSF PIRSF036456 1 624 0.0 T 28-03-2018 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 Gene3D G3DSA:1.20.200.10 108 375 7.6E-93 T 28-03-2018 AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 SUPERFAMILY SSF48557 3 456 3.61E-141 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 SUPERFAMILY SSF55729 461 588 4.43E-15 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 1.5E-201 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 Pfam PF00583 Acetyltransferase (GNAT) family 498 572 2.2E-7 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.0E-67 T 28-03-2018 AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.0E-67 T 28-03-2018 AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.0E-67 T 28-03-2018 AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.0E-67 T 28-03-2018 AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.0E-67 T 28-03-2018 AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.0E-67 T 28-03-2018 AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 Gene3D G3DSA:1.10.275.10 2 107 8.7E-32 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.365 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 Gene3D G3DSA:1.10.40.30 376 433 6.2E-27 T 28-03-2018 AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.0E-24 T 28-03-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 6.5E-28 T 28-03-2018 IPR000362 Fumarate lyase family AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 6.5E-28 T 28-03-2018 IPR000362 Fumarate lyase family AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 6.5E-28 T 28-03-2018 IPR000362 Fumarate lyase family AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 6.5E-28 T 28-03-2018 IPR000362 Fumarate lyase family AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 Gene3D G3DSA:3.40.630.30 464 605 1.9E-14 T 28-03-2018 AL549_RS20135 37c470bcd276aa38044db60cebd567d5 624 Pfam PF00206 Lyase 6 301 6.0E-89 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal AL549_RS16245 e5245aaa05521e51688bfbb34f9f680a 303 Pfam PF03466 LysR substrate binding domain 89 293 2.9E-42 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS16245 e5245aaa05521e51688bfbb34f9f680a 303 SUPERFAMILY SSF53850 89 296 2.85E-40 T 28-03-2018 AL549_RS16245 e5245aaa05521e51688bfbb34f9f680a 303 Gene3D G3DSA:3.40.190.10 89 180 2.4E-19 T 28-03-2018 AL549_RS16245 e5245aaa05521e51688bfbb34f9f680a 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS16245 e5245aaa05521e51688bfbb34f9f680a 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS16245 e5245aaa05521e51688bfbb34f9f680a 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS16245 e5245aaa05521e51688bfbb34f9f680a 303 Gene3D G3DSA:3.40.190.10 181 268 2.6E-17 T 28-03-2018 AL549_RS16245 e5245aaa05521e51688bfbb34f9f680a 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 8.0E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS16245 e5245aaa05521e51688bfbb34f9f680a 303 SUPERFAMILY SSF46785 1 112 5.9E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS16245 e5245aaa05521e51688bfbb34f9f680a 303 Gene3D G3DSA:1.10.10.10 1 84 7.5E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS11175 f129e09dfe8af18cac1852d9aee2b82f 192 PIRSF PIRSF035805 1 192 5.1E-57 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AL549_RS11175 f129e09dfe8af18cac1852d9aee2b82f 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.835 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AL549_RS11175 f129e09dfe8af18cac1852d9aee2b82f 192 Pfam PF00265 Thymidine kinase 2 186 3.1E-59 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AL549_RS11175 f129e09dfe8af18cac1852d9aee2b82f 192 SUPERFAMILY SSF57716 142 190 7.6E-17 T 28-03-2018 AL549_RS11175 f129e09dfe8af18cac1852d9aee2b82f 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 28-03-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AL549_RS11175 f129e09dfe8af18cac1852d9aee2b82f 192 Gene3D G3DSA:3.30.60.20 142 192 3.0E-18 T 28-03-2018 AL549_RS11175 f129e09dfe8af18cac1852d9aee2b82f 192 Gene3D G3DSA:3.40.50.300 2 141 8.9E-44 T 28-03-2018 AL549_RS11175 f129e09dfe8af18cac1852d9aee2b82f 192 SUPERFAMILY SSF52540 2 141 2.09E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS17295 7fc20b5f3b689ebf9d1b6094d3f1c64e 440 Gene3D G3DSA:2.40.160.60 27 440 6.1E-73 T 28-03-2018 AL549_RS17295 7fc20b5f3b689ebf9d1b6094d3f1c64e 440 SUPERFAMILY SSF56935 27 440 2.66E-91 T 28-03-2018 AL549_RS17295 7fc20b5f3b689ebf9d1b6094d3f1c64e 440 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 440 7.8E-123 T 28-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL549_RS23165 794c40a42c62236816d2d971cb084c39 105 SMART SM00739 4 31 3.4E-4 T 28-03-2018 IPR005824 KOW AL549_RS23165 794c40a42c62236816d2d971cb084c39 105 SUPERFAMILY SSF50104 4 101 8.6E-34 T 28-03-2018 IPR008991 Translation protein SH3-like domain AL549_RS23165 794c40a42c62236816d2d971cb084c39 105 Gene3D G3DSA:2.30.30.30 2 93 1.7E-30 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 AL549_RS23165 794c40a42c62236816d2d971cb084c39 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.924 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23165 794c40a42c62236816d2d971cb084c39 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.2E-39 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23165 794c40a42c62236816d2d971cb084c39 105 Pfam PF00467 KOW motif 8 37 7.8E-6 T 28-03-2018 IPR005824 KOW AL549_RS23165 794c40a42c62236816d2d971cb084c39 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 3.0E-22 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23165 794c40a42c62236816d2d971cb084c39 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 28-03-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS03390 1f52034e8471fabb52a2bb25d7f851d2 274 SUPERFAMILY SSF46785 2 79 4.76E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03390 1f52034e8471fabb52a2bb25d7f851d2 274 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.2E-13 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03390 1f52034e8471fabb52a2bb25d7f851d2 274 Gene3D G3DSA:1.10.10.10 2 83 4.4E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS05275 cdf024e37d605e65b025ba8dd085c59b 881 Pfam PF00384 Molybdopterin oxidoreductase 64 480 1.0E-75 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS05275 cdf024e37d605e65b025ba8dd085c59b 881 Gene3D G3DSA:2.20.25.90 4 51 1.4E-14 T 28-03-2018 AL549_RS05275 cdf024e37d605e65b025ba8dd085c59b 881 Pfam PF04324 BFD-like [2Fe-2S] binding domain 824 873 1.3E-13 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL549_RS05275 cdf024e37d605e65b025ba8dd085c59b 881 SMART SM00926 5 51 8.2E-11 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS05275 cdf024e37d605e65b025ba8dd085c59b 881 SUPERFAMILY SSF53706 5 562 3.53E-170 T 28-03-2018 AL549_RS05275 cdf024e37d605e65b025ba8dd085c59b 881 Gene3D G3DSA:2.40.40.20 542 698 1.3E-28 T 28-03-2018 AL549_RS05275 cdf024e37d605e65b025ba8dd085c59b 881 Gene3D G3DSA:3.40.50.740 247 541 1.4E-70 T 28-03-2018 AL549_RS05275 cdf024e37d605e65b025ba8dd085c59b 881 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 7 24 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AL549_RS05275 cdf024e37d605e65b025ba8dd085c59b 881 PIRSF PIRSF036643 3 704 1.2E-127 T 28-03-2018 AL549_RS05275 cdf024e37d605e65b025ba8dd085c59b 881 Gene3D G3DSA:3.40.50.740 61 216 1.0E-42 T 28-03-2018 AL549_RS05275 cdf024e37d605e65b025ba8dd085c59b 881 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 6 50 1.0E-13 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS05275 cdf024e37d605e65b025ba8dd085c59b 881 SUPERFAMILY SSF50692 580 699 8.36E-26 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AL549_RS05275 cdf024e37d605e65b025ba8dd085c59b 881 Pfam PF01568 Molydopterin dinucleotide binding domain 580 690 8.0E-25 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL549_RS20365 02f9a34cd9a3b84dc761404d41bcbbbe 640 Pfam PF00005 ABC transporter 328 459 4.6E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS20365 02f9a34cd9a3b84dc761404d41bcbbbe 640 Pfam PF00005 ABC transporter 17 178 2.3E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS20365 02f9a34cd9a3b84dc761404d41bcbbbe 640 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS20365 02f9a34cd9a3b84dc761404d41bcbbbe 640 Gene3D G3DSA:3.40.50.300 308 635 2.3E-49 T 28-03-2018 AL549_RS20365 02f9a34cd9a3b84dc761404d41bcbbbe 640 Gene3D G3DSA:3.40.50.300 2 279 2.6E-49 T 28-03-2018 AL549_RS20365 02f9a34cd9a3b84dc761404d41bcbbbe 640 SUPERFAMILY SSF52540 279 494 2.27E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20365 02f9a34cd9a3b84dc761404d41bcbbbe 640 SUPERFAMILY SSF52540 119 258 1.45E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20365 02f9a34cd9a3b84dc761404d41bcbbbe 640 SUPERFAMILY SSF52540 2 92 1.45E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20365 02f9a34cd9a3b84dc761404d41bcbbbe 640 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS20365 02f9a34cd9a3b84dc761404d41bcbbbe 640 SMART SM00382 337 503 5.0E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS20365 02f9a34cd9a3b84dc761404d41bcbbbe 640 SMART SM00382 26 223 7.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS20365 02f9a34cd9a3b84dc761404d41bcbbbe 640 Pfam PF12848 ABC transporter 217 295 1.4E-27 T 28-03-2018 IPR032781 ABC-transporter extension domain AL549_RS16405 d34d8a794ec8586f2fda45a771d571d5 185 Pfam PF06693 Protein of unknown function (DUF1190) 38 181 5.0E-24 T 28-03-2018 IPR009576 Biofilm formation YgiB AL549_RS10480 00029da39b8579b946101ec74365ca2e 698 SUPERFAMILY SSF141868 450 688 9.94E-64 T 28-03-2018 IPR001633 EAL domain AL549_RS10480 00029da39b8579b946101ec74365ca2e 698 Pfam PF02378 Phosphotransferase system, EIIC 31 333 6.9E-18 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL549_RS10480 00029da39b8579b946101ec74365ca2e 698 Gene3D G3DSA:3.20.20.450 430 693 3.3E-68 T 28-03-2018 IPR001633 EAL domain AL549_RS10480 00029da39b8579b946101ec74365ca2e 698 SMART SM00052 436 680 6.1E-59 T 28-03-2018 IPR001633 EAL domain AL549_RS10480 00029da39b8579b946101ec74365ca2e 698 Pfam PF00563 EAL domain 449 674 7.9E-60 T 28-03-2018 IPR001633 EAL domain AL549_RS21770 d0e103b006f9f758051a0998e87aa47b 453 SUPERFAMILY SSF116878 120 219 2.62E-53 T 28-03-2018 AL549_RS21770 d0e103b006f9f758051a0998e87aa47b 453 SUPERFAMILY SSF116878 378 453 2.62E-53 T 28-03-2018 AL549_RS21770 d0e103b006f9f758051a0998e87aa47b 453 Gene3D G3DSA:1.20.120.430 279 453 2.2E-33 T 28-03-2018 AL549_RS21770 d0e103b006f9f758051a0998e87aa47b 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 370 1.5E-23 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL549_RS21770 d0e103b006f9f758051a0998e87aa47b 453 Pfam PF12631 MnmE helical domain 122 450 4.4E-62 T 28-03-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 AL549_RS21770 d0e103b006f9f758051a0998e87aa47b 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 1.3E-35 T 28-03-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 AL549_RS21770 d0e103b006f9f758051a0998e87aa47b 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 9.9E-102 T 28-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AL549_RS21770 d0e103b006f9f758051a0998e87aa47b 453 Gene3D G3DSA:3.30.1360.120 1 120 4.4E-41 T 28-03-2018 AL549_RS21770 d0e103b006f9f758051a0998e87aa47b 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 33.086 T 28-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AL549_RS21770 d0e103b006f9f758051a0998e87aa47b 453 Pfam PF01926 50S ribosome-binding GTPase 217 306 5.1E-24 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS21770 d0e103b006f9f758051a0998e87aa47b 453 SUPERFAMILY SSF52540 203 371 1.19E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS21770 d0e103b006f9f758051a0998e87aa47b 453 SUPERFAMILY SSF52540 70 169 1.19E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS21770 d0e103b006f9f758051a0998e87aa47b 453 Gene3D G3DSA:1.20.120.430 121 278 1.1E-25 T 28-03-2018 AL549_RS07450 d9efd21e1f7348f6ff1f27d707d5993e 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 7.9E-75 T 28-03-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AL549_RS07450 d9efd21e1f7348f6ff1f27d707d5993e 196 Gene3D G3DSA:1.20.5.510 6 33 2.8E-16 T 28-03-2018 AL549_RS07450 d9efd21e1f7348f6ff1f27d707d5993e 196 SUPERFAMILY SSF50022 30 191 1.14E-43 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL549_RS07450 d9efd21e1f7348f6ff1f27d707d5993e 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 1.6E-14 T 28-03-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AL549_RS07450 d9efd21e1f7348f6ff1f27d707d5993e 196 Gene3D G3DSA:2.102.10.10 34 196 1.4E-40 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL549_RS07450 d9efd21e1f7348f6ff1f27d707d5993e 196 Pfam PF00355 Rieske [2Fe-2S] domain 54 174 1.3E-11 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL549_RS07450 d9efd21e1f7348f6ff1f27d707d5993e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 3.0E-7 T 28-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AL549_RS07450 d9efd21e1f7348f6ff1f27d707d5993e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 3.0E-7 T 28-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AL549_RS07450 d9efd21e1f7348f6ff1f27d707d5993e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 3.0E-7 T 28-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AL549_RS18295 cea1dc8b98ed5800ca862073c8cdfe9f 383 PIRSF PIRSF004810 1 383 8.5E-122 T 28-03-2018 IPR014047 Chromate transporter, long chain AL549_RS18295 cea1dc8b98ed5800ca862073c8cdfe9f 383 TIGRFAM TIGR00937 2A51: chromate efflux transporter 11 377 7.1E-94 T 28-03-2018 IPR014047 Chromate transporter, long chain AL549_RS18295 cea1dc8b98ed5800ca862073c8cdfe9f 383 Pfam PF02417 Chromate transporter 5 171 2.9E-34 T 28-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AL549_RS18295 cea1dc8b98ed5800ca862073c8cdfe9f 383 Pfam PF02417 Chromate transporter 214 375 4.2E-35 T 28-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AL549_RS02365 6b5ab6709f321c91c06d9498cc2d9bd4 586 SUPERFAMILY SSF52794 490 580 2.88E-14 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS02365 6b5ab6709f321c91c06d9498cc2d9bd4 586 Gene3D G3DSA:3.40.50.2300 486 583 4.5E-16 T 28-03-2018 AL549_RS02365 6b5ab6709f321c91c06d9498cc2d9bd4 586 Pfam PF03611 PTS system sugar-specific permease component 15 415 8.3E-123 T 28-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AL549_RS02365 6b5ab6709f321c91c06d9498cc2d9bd4 586 PIRSF PIRSF037343 1 582 6.2E-284 T 28-03-2018 IPR017180 Phosphotransferase system component IIBC, sugar-specific, predicted AL549_RS02365 6b5ab6709f321c91c06d9498cc2d9bd4 586 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 491 564 5.4E-12 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS12585 c33e1f8def1eefe251da4a3ac5b98d66 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 301 5.0E-38 T 28-03-2018 AL549_RS12585 c33e1f8def1eefe251da4a3ac5b98d66 343 Gene3D G3DSA:3.40.190.10 19 143 1.0E-23 T 28-03-2018 AL549_RS12585 c33e1f8def1eefe251da4a3ac5b98d66 343 PIRSF PIRSF019574 1 343 3.8E-109 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12585 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 5.9E-71 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12585 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 5.9E-71 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12585 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 5.9E-71 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12585 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 5.9E-71 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12585 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 5.9E-71 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12585 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 5.9E-71 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12585 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 5.9E-71 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12585 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 5.9E-71 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12585 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 5.9E-71 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL549_RS12585 c33e1f8def1eefe251da4a3ac5b98d66 343 SUPERFAMILY SSF53850 26 330 5.65E-86 T 28-03-2018 AL549_RS12585 c33e1f8def1eefe251da4a3ac5b98d66 343 Gene3D G3DSA:3.40.190.10 144 299 3.6E-40 T 28-03-2018 AL549_RS17940 c591830b346ba6a3713d71b1e985b73f 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 28-03-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site AL549_RS17940 c591830b346ba6a3713d71b1e985b73f 231 Gene3D G3DSA:3.30.2310.10 148 227 1.4E-20 T 28-03-2018 AL549_RS17940 c591830b346ba6a3713d71b1e985b73f 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 4.1E-39 T 28-03-2018 IPR023370 TsaA-like domain AL549_RS17940 c591830b346ba6a3713d71b1e985b73f 231 SUPERFAMILY SSF118196 2 225 3.53E-78 T 28-03-2018 IPR023370 TsaA-like domain AL549_RS17940 c591830b346ba6a3713d71b1e985b73f 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 3 145 1.9E-46 T 28-03-2018 IPR023370 TsaA-like domain AL549_RS17940 c591830b346ba6a3713d71b1e985b73f 231 Gene3D G3DSA:2.40.30.70 3 147 1.0E-50 T 28-03-2018 IPR023370 TsaA-like domain AL549_RS12060 1bf14ee448f82b885fc4799b79b1ef1e 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 251 431 3.6E-39 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS12060 1bf14ee448f82b885fc4799b79b1ef1e 467 SUPERFAMILY SSF58104 157 466 1.7E-65 T 28-03-2018 AL549_RS12060 1bf14ee448f82b885fc4799b79b1ef1e 467 Gene3D G3DSA:1.10.287.950 232 431 9.3E-52 T 28-03-2018 AL549_RS12060 1bf14ee448f82b885fc4799b79b1ef1e 467 SMART SM00283 205 466 4.6E-58 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS12060 1bf14ee448f82b885fc4799b79b1ef1e 467 Gene3D G3DSA:1.10.287.500 163 231 0.0059 T 28-03-2018 AL549_RS06015 81d26108a772460c809d437855b9d7c5 382 SUPERFAMILY SSF56796 3 380 2.36E-99 T 28-03-2018 AL549_RS06015 81d26108a772460c809d437855b9d7c5 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 1.6E-83 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL549_RS06015 81d26108a772460c809d437855b9d7c5 382 Gene3D G3DSA:1.20.1090.10 180 382 9.9E-34 T 28-03-2018 AL549_RS06015 81d26108a772460c809d437855b9d7c5 382 Gene3D G3DSA:3.40.50.1970 8 179 7.9E-46 T 28-03-2018 AL549_RS00320 a8e5608610223acf80e67645c00416bb 527 SMART SM00267 358 526 2.1E-33 T 28-03-2018 IPR000160 GGDEF domain AL549_RS00320 a8e5608610223acf80e67645c00416bb 527 SUPERFAMILY SSF55073 374 525 3.69E-36 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS00320 a8e5608610223acf80e67645c00416bb 527 Gene3D G3DSA:1.25.40.10 30 134 2.1E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS00320 a8e5608610223acf80e67645c00416bb 527 Gene3D G3DSA:3.30.70.270 366 527 2.0E-43 T 28-03-2018 AL549_RS00320 a8e5608610223acf80e67645c00416bb 527 SUPERFAMILY SSF48452 38 245 3.95E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS00320 a8e5608610223acf80e67645c00416bb 527 Gene3D G3DSA:1.25.40.10 135 365 1.7E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS00320 a8e5608610223acf80e67645c00416bb 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 522 6.6E-33 T 28-03-2018 IPR000160 GGDEF domain AL549_RS00320 a8e5608610223acf80e67645c00416bb 527 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 525 6.0E-34 T 28-03-2018 IPR000160 GGDEF domain AL549_RS23620 d670756f1124bf409d7374af01a598a6 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 464 3.8E-266 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AL549_RS23620 d670756f1124bf409d7374af01a598a6 466 Gene3D G3DSA:3.40.1060.10 154 288 1.4E-43 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS23620 d670756f1124bf409d7374af01a598a6 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL549_RS23620 d670756f1124bf409d7374af01a598a6 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 3.0E-160 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS23620 d670756f1124bf409d7374af01a598a6 466 PRINTS PR00415 Aconitase family signature 286 300 9.0E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS23620 d670756f1124bf409d7374af01a598a6 466 PRINTS PR00415 Aconitase family signature 133 148 9.0E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS23620 d670756f1124bf409d7374af01a598a6 466 PRINTS PR00415 Aconitase family signature 209 222 9.0E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS23620 d670756f1124bf409d7374af01a598a6 466 PRINTS PR00415 Aconitase family signature 82 95 9.0E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS23620 d670756f1124bf409d7374af01a598a6 466 PRINTS PR00415 Aconitase family signature 119 132 9.0E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS23620 d670756f1124bf409d7374af01a598a6 466 PRINTS PR00415 Aconitase family signature 108 116 9.0E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS23620 d670756f1124bf409d7374af01a598a6 466 PRINTS PR00415 Aconitase family signature 195 208 9.0E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS23620 d670756f1124bf409d7374af01a598a6 466 PRINTS PR00415 Aconitase family signature 399 412 9.0E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS23620 d670756f1124bf409d7374af01a598a6 466 PRINTS PR00415 Aconitase family signature 343 354 9.0E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS23620 d670756f1124bf409d7374af01a598a6 466 Gene3D G3DSA:3.30.499.10 1 153 2.2E-38 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS23620 d670756f1124bf409d7374af01a598a6 466 SUPERFAMILY SSF53732 1 465 9.55E-164 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS23620 d670756f1124bf409d7374af01a598a6 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL549_RS23620 d670756f1124bf409d7374af01a598a6 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.843 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AL549_RS23620 d670756f1124bf409d7374af01a598a6 466 Gene3D G3DSA:3.30.499.10 305 466 2.2E-51 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS17595 6b334b15f9c35a604d585e8633b659f8 292 Gene3D G3DSA:3.20.20.70 1 291 1.8E-92 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS17595 6b334b15f9c35a604d585e8633b659f8 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 6.4E-34 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL549_RS17595 6b334b15f9c35a604d585e8633b659f8 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 6.4E-34 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL549_RS17595 6b334b15f9c35a604d585e8633b659f8 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 6.4E-34 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL549_RS17595 6b334b15f9c35a604d585e8633b659f8 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 6.4E-34 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL549_RS17595 6b334b15f9c35a604d585e8633b659f8 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 287 2.7E-118 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL549_RS17595 6b334b15f9c35a604d585e8633b659f8 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AL549_RS17595 6b334b15f9c35a604d585e8633b659f8 292 SUPERFAMILY SSF51569 2 290 5.65E-101 T 28-03-2018 AL549_RS17595 6b334b15f9c35a604d585e8633b659f8 292 SMART SM01130 1 290 3.6E-142 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL549_RS17595 6b334b15f9c35a604d585e8633b659f8 292 PIRSF PIRSF001365 1 291 4.3E-94 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL549_RS17595 6b334b15f9c35a604d585e8633b659f8 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 286 5.1E-109 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL549_RS17595 6b334b15f9c35a604d585e8633b659f8 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 28-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL549_RS17595 6b334b15f9c35a604d585e8633b659f8 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.786 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL549_RS03600 32da34be414afed07ff58cf7368e05dc 295 Gene3D G3DSA:1.10.1200.10 210 295 4.0E-9 T 28-03-2018 AL549_RS03600 32da34be414afed07ff58cf7368e05dc 295 Pfam PF00550 Phosphopantetheine attachment site 217 277 1.5E-6 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL549_RS03600 32da34be414afed07ff58cf7368e05dc 295 SUPERFAMILY SSF47336 213 291 6.67E-9 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL549_RS03600 32da34be414afed07ff58cf7368e05dc 295 Gene3D G3DSA:3.40.50.850 1 209 6.4E-43 T 28-03-2018 AL549_RS03600 32da34be414afed07ff58cf7368e05dc 295 PIRSF PIRSF001111 1 290 1.7E-125 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AL549_RS03600 32da34be414afed07ff58cf7368e05dc 295 Pfam PF00857 Isochorismatase family 32 193 2.2E-31 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL549_RS03600 32da34be414afed07ff58cf7368e05dc 295 PRINTS PR01398 Isochorismatase signature 184 201 1.9E-50 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AL549_RS03600 32da34be414afed07ff58cf7368e05dc 295 PRINTS PR01398 Isochorismatase signature 63 80 1.9E-50 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AL549_RS03600 32da34be414afed07ff58cf7368e05dc 295 PRINTS PR01398 Isochorismatase signature 110 132 1.9E-50 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AL549_RS03600 32da34be414afed07ff58cf7368e05dc 295 PRINTS PR01398 Isochorismatase signature 166 184 1.9E-50 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AL549_RS03600 32da34be414afed07ff58cf7368e05dc 295 PRINTS PR01398 Isochorismatase signature 80 99 1.9E-50 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AL549_RS03600 32da34be414afed07ff58cf7368e05dc 295 PRINTS PR01398 Isochorismatase signature 2 14 1.9E-50 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AL549_RS03600 32da34be414afed07ff58cf7368e05dc 295 SUPERFAMILY SSF52499 1 209 7.98E-60 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL549_RS06930 945c3119b9041ffdebdb33ecc8550eb8 796 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 348 6.4E-118 T 28-03-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AL549_RS06930 945c3119b9041ffdebdb33ecc8550eb8 796 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 487 790 3.7E-64 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AL549_RS06930 945c3119b9041ffdebdb33ecc8550eb8 796 PIRSF PIRSF000854 5 796 0.0 T 28-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 AL549_RS06930 945c3119b9041ffdebdb33ecc8550eb8 796 Gene3D G3DSA:3.30.470.20 199 362 9.9E-46 T 28-03-2018 AL549_RS06930 945c3119b9041ffdebdb33ecc8550eb8 796 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 699 717 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AL549_RS06930 945c3119b9041ffdebdb33ecc8550eb8 796 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 12 792 0.0 T 28-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 AL549_RS06930 945c3119b9041ffdebdb33ecc8550eb8 796 SUPERFAMILY SSF51621 466 795 4.97E-101 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL549_RS06930 945c3119b9041ffdebdb33ecc8550eb8 796 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 699 714 1.3E-5 T 28-03-2018 AL549_RS06930 945c3119b9041ffdebdb33ecc8550eb8 796 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 716 731 1.3E-5 T 28-03-2018 AL549_RS06930 945c3119b9041ffdebdb33ecc8550eb8 796 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 752 764 1.3E-5 T 28-03-2018 AL549_RS06930 945c3119b9041ffdebdb33ecc8550eb8 796 Pfam PF00391 PEP-utilising enzyme, mobile domain 390 460 1.8E-26 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL549_RS06930 945c3119b9041ffdebdb33ecc8550eb8 796 Gene3D G3DSA:3.20.20.60 483 796 1.2E-109 T 28-03-2018 AL549_RS06930 945c3119b9041ffdebdb33ecc8550eb8 796 SUPERFAMILY SSF52009 354 472 1.83E-34 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL549_RS06930 945c3119b9041ffdebdb33ecc8550eb8 796 Gene3D G3DSA:3.50.30.10 363 482 3.4E-36 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL549_RS06930 945c3119b9041ffdebdb33ecc8550eb8 796 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 419 430 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AL549_RS06930 945c3119b9041ffdebdb33ecc8550eb8 796 Gene3D G3DSA:3.30.1490.20 7 198 8.1E-54 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL549_RS06930 945c3119b9041ffdebdb33ecc8550eb8 796 SUPERFAMILY SSF56059 6 389 1.53E-109 T 28-03-2018 AL549_RS19695 f27c2057868300b60857452c8e19ab0e 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 82.489 T 28-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AL549_RS19695 f27c2057868300b60857452c8e19ab0e 334 Gene3D G3DSA:3.40.50.1370 1 147 3.3E-50 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL549_RS19695 f27c2057868300b60857452c8e19ab0e 334 Gene3D G3DSA:3.40.50.1370 148 319 1.6E-54 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL549_RS19695 f27c2057868300b60857452c8e19ab0e 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 4.0E-58 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AL549_RS19695 f27c2057868300b60857452c8e19ab0e 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL549_RS19695 f27c2057868300b60857452c8e19ab0e 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 3.6E-133 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL549_RS19695 f27c2057868300b60857452c8e19ab0e 334 SUPERFAMILY SSF53671 4 333 2.23E-97 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL549_RS19695 f27c2057868300b60857452c8e19ab0e 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 7.0E-44 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AL549_RS19695 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.3E-31 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL549_RS19695 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 1.3E-31 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL549_RS19695 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.3E-31 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL549_RS19695 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.3E-31 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL549_RS19695 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 1.3E-31 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL549_RS19695 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 3.8E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL549_RS19695 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 3.8E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL549_RS19695 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.8E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL549_RS19695 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 3.8E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL549_RS11050 eeb8c4838afb85c9d79b6df46e222848 418 PIRSF PIRSF003085 25 418 3.2E-122 T 28-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AL549_RS11050 eeb8c4838afb85c9d79b6df46e222848 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 143 411 9.4E-85 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS11050 eeb8c4838afb85c9d79b6df46e222848 418 Gene3D G3DSA:3.40.50.150 138 417 8.2E-62 T 28-03-2018 AL549_RS11050 eeb8c4838afb85c9d79b6df46e222848 418 SUPERFAMILY SSF53335 21 371 5.68E-91 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS17750 1be204a987af8e5868cbe655c4372e89 104 Gene3D G3DSA:1.10.760.10 14 103 3.8E-21 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS17750 1be204a987af8e5868cbe655c4372e89 104 SUPERFAMILY SSF46626 17 103 1.33E-22 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS17750 1be204a987af8e5868cbe655c4372e89 104 Pfam PF00034 Cytochrome c 30 104 2.6E-9 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS00830 d7997fb6c427205634c488d3cffb2eda 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 4.8E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS00830 d7997fb6c427205634c488d3cffb2eda 305 Pfam PF03466 LysR substrate binding domain 93 293 1.7E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS00830 d7997fb6c427205634c488d3cffb2eda 305 Gene3D G3DSA:3.40.190.10 181 265 4.0E-22 T 28-03-2018 AL549_RS00830 d7997fb6c427205634c488d3cffb2eda 305 Gene3D G3DSA:1.10.10.10 1 87 1.7E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00830 d7997fb6c427205634c488d3cffb2eda 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS00830 d7997fb6c427205634c488d3cffb2eda 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS00830 d7997fb6c427205634c488d3cffb2eda 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS00830 d7997fb6c427205634c488d3cffb2eda 305 SUPERFAMILY SSF53850 94 299 1.36E-41 T 28-03-2018 AL549_RS00830 d7997fb6c427205634c488d3cffb2eda 305 SUPERFAMILY SSF46785 7 86 2.63E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00830 d7997fb6c427205634c488d3cffb2eda 305 Gene3D G3DSA:3.40.190.10 93 180 1.5E-13 T 28-03-2018 AL549_RS21505 bb64bbe951174078139145a1104f8517 314 Pfam PF05036 Sporulation related domain 74 143 3.0E-9 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL549_RS21505 bb64bbe951174078139145a1104f8517 314 SUPERFAMILY SSF110997 72 145 1.16E-7 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL549_RS21870 a22768ec3f4a58b3782bf29533130120 306 Gene3D G3DSA:3.40.190.10 89 179 1.4E-7 T 28-03-2018 AL549_RS21870 a22768ec3f4a58b3782bf29533130120 306 Pfam PF03466 LysR substrate binding domain 88 289 3.0E-23 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS21870 a22768ec3f4a58b3782bf29533130120 306 Gene3D G3DSA:1.10.10.10 2 84 7.1E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21870 a22768ec3f4a58b3782bf29533130120 306 SUPERFAMILY SSF46785 6 87 1.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21870 a22768ec3f4a58b3782bf29533130120 306 SUPERFAMILY SSF53850 89 290 5.25E-26 T 28-03-2018 AL549_RS21870 a22768ec3f4a58b3782bf29533130120 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.0E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS21870 a22768ec3f4a58b3782bf29533130120 306 Gene3D G3DSA:3.40.190.10 180 262 2.1E-7 T 28-03-2018 AL549_RS11115 8cbf3c840e7cae3460a40c49eccfc380 431 PIRSF PIRSF000099 1 427 4.1E-169 T 28-03-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL549_RS11115 8cbf3c840e7cae3460a40c49eccfc380 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 28-03-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 AL549_RS11115 8cbf3c840e7cae3460a40c49eccfc380 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.32 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL549_RS11115 8cbf3c840e7cae3460a40c49eccfc380 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 7.7E-166 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL549_RS11115 8cbf3c840e7cae3460a40c49eccfc380 431 Gene3D G3DSA:3.40.50.1980 223 368 1.0E-68 T 28-03-2018 AL549_RS11115 8cbf3c840e7cae3460a40c49eccfc380 431 Gene3D G3DSA:3.40.50.1980 26 222 2.2E-87 T 28-03-2018 AL549_RS11115 8cbf3c840e7cae3460a40c49eccfc380 431 Pfam PF00815 Histidinol dehydrogenase 25 424 1.7E-170 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL549_RS11115 8cbf3c840e7cae3460a40c49eccfc380 431 SUPERFAMILY SSF53720 3 424 3.33E-92 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL549_RS11115 8cbf3c840e7cae3460a40c49eccfc380 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.0E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL549_RS11115 8cbf3c840e7cae3460a40c49eccfc380 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 1.0E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL549_RS11115 8cbf3c840e7cae3460a40c49eccfc380 431 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 1.0E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL549_RS11115 8cbf3c840e7cae3460a40c49eccfc380 431 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 1.0E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL549_RS11115 8cbf3c840e7cae3460a40c49eccfc380 431 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 1.0E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL549_RS11115 8cbf3c840e7cae3460a40c49eccfc380 431 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 1.0E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL549_RS11115 8cbf3c840e7cae3460a40c49eccfc380 431 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 1.0E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL549_RS11115 8cbf3c840e7cae3460a40c49eccfc380 431 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 1.0E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL549_RS04125 cbd89deab0560ffcf9ab5c7658d0530d 44 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 2.3E-26 T 28-03-2018 IPR014175 Conserved hypothetical protein CHP02808 AL549_RS04125 cbd89deab0560ffcf9ab5c7658d0530d 44 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 42 4.6E-26 T 28-03-2018 IPR014175 Conserved hypothetical protein CHP02808 AL549_RS06575 50f895315d40f27aabf5e1a284f7bfd3 421 Pfam PF00437 Type II/IV secretion system protein 71 347 4.7E-80 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL549_RS06575 50f895315d40f27aabf5e1a284f7bfd3 421 Gene3D G3DSA:3.40.50.300 156 372 5.1E-18 T 28-03-2018 AL549_RS06575 50f895315d40f27aabf5e1a284f7bfd3 421 Gene3D G3DSA:3.30.450.90 67 155 6.8E-35 T 28-03-2018 AL549_RS06575 50f895315d40f27aabf5e1a284f7bfd3 421 SUPERFAMILY SSF52540 56 358 4.93E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11445 94bc9ff63dfb667b3b1e5695449fd36f 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 1.4E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS11445 94bc9ff63dfb667b3b1e5695449fd36f 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 1.4E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS11445 94bc9ff63dfb667b3b1e5695449fd36f 481 SMART SM00387 372 479 4.6E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS11445 94bc9ff63dfb667b3b1e5695449fd36f 481 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 477 1.7E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS11445 94bc9ff63dfb667b3b1e5695449fd36f 481 SUPERFAMILY SSF55874 339 475 1.44E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS11445 94bc9ff63dfb667b3b1e5695449fd36f 481 Gene3D G3DSA:3.30.565.10 335 481 3.0E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS15100 7a35d722990e05e1890b692b58f600d4 105 SUPERFAMILY SSF50118 3 105 9.16E-32 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AL549_RS15100 7a35d722990e05e1890b692b58f600d4 105 Gene3D G3DSA:2.30.30.110 3 104 6.9E-27 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AL549_RS15100 7a35d722990e05e1890b692b58f600d4 105 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 18 104 2.0E-37 T 28-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AL549_RS15100 7a35d722990e05e1890b692b58f600d4 105 Pfam PF01845 CcdB protein 3 104 2.3E-35 T 28-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AL549_RS15185 7a35d722990e05e1890b692b58f600d4 105 SUPERFAMILY SSF50118 3 105 9.16E-32 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AL549_RS15185 7a35d722990e05e1890b692b58f600d4 105 Gene3D G3DSA:2.30.30.110 3 104 6.9E-27 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AL549_RS15185 7a35d722990e05e1890b692b58f600d4 105 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 18 104 2.0E-37 T 28-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AL549_RS15185 7a35d722990e05e1890b692b58f600d4 105 Pfam PF01845 CcdB protein 3 104 2.3E-35 T 28-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AL549_RS23625 226f03dad3f6ed1770699314d3875584 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 1.4E-136 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AL549_RS23625 226f03dad3f6ed1770699314d3875584 363 Gene3D G3DSA:3.40.718.10 1 363 1.1E-132 T 28-03-2018 AL549_RS23625 226f03dad3f6ed1770699314d3875584 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 356 5.5E-164 T 28-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AL549_RS23625 226f03dad3f6ed1770699314d3875584 363 SUPERFAMILY SSF53659 4 360 1.54E-123 T 28-03-2018 AL549_RS23625 226f03dad3f6ed1770699314d3875584 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.018 T 28-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AL549_RS23625 226f03dad3f6ed1770699314d3875584 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AL549_RS23625 226f03dad3f6ed1770699314d3875584 363 SMART SM01329 7 356 1.4E-202 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AL549_RS07740 54823b5d5c96c26e3782e287e4800203 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 6.9E-88 T 28-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL549_RS07740 54823b5d5c96c26e3782e287e4800203 226 SMART SM00987 49 210 6.9E-41 T 28-03-2018 AL549_RS07740 54823b5d5c96c26e3782e287e4800203 226 Pfam PF03167 Uracil DNA glycosylase superfamily 53 207 2.7E-24 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL549_RS07740 54823b5d5c96c26e3782e287e4800203 226 SMART SM00986 49 210 6.9E-41 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL549_RS07740 54823b5d5c96c26e3782e287e4800203 226 Gene3D G3DSA:3.40.470.10 2 223 3.7E-105 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL549_RS07740 54823b5d5c96c26e3782e287e4800203 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.209 T 28-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL549_RS07740 54823b5d5c96c26e3782e287e4800203 226 SUPERFAMILY SSF52141 5 222 2.05E-96 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL549_RS07740 54823b5d5c96c26e3782e287e4800203 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 28-03-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL549_RS23035 c90f50ddf45664e1a86108b9ba166535 409 Pfam PF00534 Glycosyl transferases group 1 207 377 7.2E-9 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL549_RS23035 c90f50ddf45664e1a86108b9ba166535 409 Gene3D G3DSA:3.40.50.2000 19 208 1.2E-6 T 28-03-2018 AL549_RS23035 c90f50ddf45664e1a86108b9ba166535 409 Gene3D G3DSA:3.40.50.2000 209 385 1.6E-21 T 28-03-2018 AL549_RS23035 c90f50ddf45664e1a86108b9ba166535 409 SUPERFAMILY SSF53756 2 398 3.7E-30 T 28-03-2018 AL549_RS00245 8edf8446c128a8ce0692cb0cee634fac 629 SMART SM00304 359 405 87.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS00245 8edf8446c128a8ce0692cb0cee634fac 629 SMART SM00304 298 352 6.7E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS00245 8edf8446c128a8ce0692cb0cee634fac 629 Gene3D G3DSA:3.30.450.20 159 276 1.6E-24 T 28-03-2018 AL549_RS00245 8edf8446c128a8ce0692cb0cee634fac 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 439 595 7.3E-41 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS00245 8edf8446c128a8ce0692cb0cee634fac 629 Gene3D G3DSA:3.30.450.20 32 158 1.0E-19 T 28-03-2018 AL549_RS00245 8edf8446c128a8ce0692cb0cee634fac 629 SUPERFAMILY SSF103190 92 177 9.02E-9 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL549_RS00245 8edf8446c128a8ce0692cb0cee634fac 629 Pfam PF02743 Cache domain 46 260 7.6E-31 T 28-03-2018 IPR033479 Double Cache domain 1 AL549_RS00245 8edf8446c128a8ce0692cb0cee634fac 629 SMART SM00283 367 628 1.5E-67 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS00245 8edf8446c128a8ce0692cb0cee634fac 629 Gene3D G3DSA:1.10.287.950 305 401 5.7E-6 T 28-03-2018 AL549_RS00245 8edf8446c128a8ce0692cb0cee634fac 629 Gene3D G3DSA:1.10.287.950 402 629 1.9E-49 T 28-03-2018 AL549_RS00245 8edf8446c128a8ce0692cb0cee634fac 629 Pfam PF00672 HAMP domain 307 347 2.6E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS00245 8edf8446c128a8ce0692cb0cee634fac 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 465 492 1.4E-19 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS00245 8edf8446c128a8ce0692cb0cee634fac 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 494 523 1.4E-19 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS00245 8edf8446c128a8ce0692cb0cee634fac 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 276 296 1.4E-19 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS00245 8edf8446c128a8ce0692cb0cee634fac 629 SUPERFAMILY SSF58104 320 629 1.7E-74 T 28-03-2018 AL549_RS06300 0b3a93f25c0c983ad285136763d0e369 641 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL549_RS06300 0b3a93f25c0c983ad285136763d0e369 641 SMART SM00487 25 223 2.6E-60 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS06300 0b3a93f25c0c983ad285136763d0e369 641 Gene3D G3DSA:3.40.50.300 223 377 6.7E-46 T 28-03-2018 AL549_RS06300 0b3a93f25c0c983ad285136763d0e369 641 Pfam PF00270 DEAD/DEAH box helicase 30 195 1.1E-48 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL549_RS06300 0b3a93f25c0c983ad285136763d0e369 641 Pfam PF03880 DbpA RNA binding domain 478 545 9.6E-17 T 28-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AL549_RS06300 0b3a93f25c0c983ad285136763d0e369 641 Gene3D G3DSA:3.40.50.300 1 222 6.4E-57 T 28-03-2018 AL549_RS06300 0b3a93f25c0c983ad285136763d0e369 641 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 550 41.583 T 28-03-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 AL549_RS06300 0b3a93f25c0c983ad285136763d0e369 641 SMART SM00490 259 340 2.2E-34 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS06300 0b3a93f25c0c983ad285136763d0e369 641 SUPERFAMILY SSF52540 74 361 3.86E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06300 0b3a93f25c0c983ad285136763d0e369 641 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.3E-29 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS21920 ee7a0fb29ac42efc479e55bd0f8f910b 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.678 T 28-03-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 AL549_RS21920 ee7a0fb29ac42efc479e55bd0f8f910b 328 Pfam PF01636 Phosphotransferase enzyme family 34 253 2.7E-45 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase AL549_RS21920 ee7a0fb29ac42efc479e55bd0f8f910b 328 Gene3D G3DSA:3.90.1200.10 112 322 8.1E-23 T 28-03-2018 AL549_RS21920 ee7a0fb29ac42efc479e55bd0f8f910b 328 SUPERFAMILY SSF56112 6 328 1.75E-90 T 28-03-2018 IPR011009 Protein kinase-like domain AL549_RS21920 ee7a0fb29ac42efc479e55bd0f8f910b 328 Gene3D G3DSA:3.30.200.20 6 107 3.6E-18 T 28-03-2018 AL549_RS17115 38ef15f2ad084693671b2f554805d9b4 239 SMART SM00862 154 230 7.3E-25 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS17115 38ef15f2ad084693671b2f554805d9b4 239 Gene3D G3DSA:1.10.10.10 129 237 5.5E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS17115 38ef15f2ad084693671b2f554805d9b4 239 Gene3D G3DSA:3.40.50.2300 1 128 1.7E-32 T 28-03-2018 AL549_RS17115 38ef15f2ad084693671b2f554805d9b4 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 7.9E-24 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS17115 38ef15f2ad084693671b2f554805d9b4 239 Pfam PF00072 Response regulator receiver domain 9 117 6.0E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS17115 38ef15f2ad084693671b2f554805d9b4 239 SUPERFAMILY SSF46894 131 231 1.62E-28 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS17115 38ef15f2ad084693671b2f554805d9b4 239 SUPERFAMILY SSF52172 4 129 3.7E-36 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS17115 38ef15f2ad084693671b2f554805d9b4 239 SMART SM00448 7 117 4.4E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS21020 885a26a6ed1a50bb463e3fb5408166a3 347 SUPERFAMILY SSF56194 207 342 2.22E-46 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS21020 885a26a6ed1a50bb463e3fb5408166a3 347 Gene3D G3DSA:3.30.43.10 1 71 1.8E-18 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AL549_RS21020 885a26a6ed1a50bb463e3fb5408166a3 347 Pfam PF01565 FAD binding domain 23 144 2.2E-19 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL549_RS21020 885a26a6ed1a50bb463e3fb5408166a3 347 SUPERFAMILY SSF56176 8 197 1.83E-41 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL549_RS21020 885a26a6ed1a50bb463e3fb5408166a3 347 Gene3D G3DSA:3.90.78.10 225 337 4.8E-37 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS21020 885a26a6ed1a50bb463e3fb5408166a3 347 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 333 8.6E-91 T 28-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS21020 885a26a6ed1a50bb463e3fb5408166a3 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 80.652 T 28-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS21020 885a26a6ed1a50bb463e3fb5408166a3 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 332 5.5E-32 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS21020 885a26a6ed1a50bb463e3fb5408166a3 347 Gene3D G3DSA:3.30.465.10 73 222 1.8E-44 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL549_RS19365 71436b5eaf1418a2144d178903f3bccd 231 Pfam PF04231 Endonuclease I 38 227 4.2E-45 T 28-03-2018 IPR007346 Endonuclease I GO:0004518 AL549_RS19365 71436b5eaf1418a2144d178903f3bccd 231 SUPERFAMILY SSF54060 20 228 2.82E-94 T 28-03-2018 AL549_RS07565 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 328 3.2E-136 T 28-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 AL549_RS07565 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.4E-36 T 28-03-2018 IPR024757 Cell division protein FtsZ, C-terminal AL549_RS07565 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 Gene3D G3DSA:3.40.50.1440 5 214 7.9E-41 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL549_RS07565 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 SMART SM00864 13 205 1.6E-112 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL549_RS07565 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 28-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AL549_RS07565 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 PRINTS PR00423 Cell division protein FtsZ signature 126 147 5.1E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL549_RS07565 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 PRINTS PR00423 Cell division protein FtsZ signature 212 233 5.1E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL549_RS07565 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 PRINTS PR00423 Cell division protein FtsZ signature 189 211 5.1E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL549_RS07565 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 PRINTS PR00423 Cell division protein FtsZ signature 98 118 5.1E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL549_RS07565 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 SMART SM00865 207 325 1.4E-55 T 28-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 AL549_RS07565 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 391 38.123 T 28-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 AL549_RS07565 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 28-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AL549_RS07565 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 SUPERFAMILY SSF55307 204 320 9.61E-43 T 28-03-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 AL549_RS07565 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 5.2E-39 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL549_RS07565 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 Gene3D G3DSA:3.30.1330.20 215 325 2.9E-45 T 28-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 AL549_RS07565 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 SUPERFAMILY SSF52490 13 208 8.11E-69 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL549_RS18275 f36c635d4f711613891279b7f551a4cf 478 PIRSF PIRSF006060 1 475 6.8E-40 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL549_RS18275 f36c635d4f711613891279b7f551a4cf 478 Pfam PF13520 Amino acid permease 11 443 1.2E-29 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL549_RS18495 a761e31e221263306b0aeb7422cbb641 175 Gene3D G3DSA:3.30.1050.10 26 141 5.1E-16 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AL549_RS18495 a761e31e221263306b0aeb7422cbb641 175 Pfam PF02036 SCP-2 sterol transfer family 42 134 3.5E-19 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AL549_RS18495 a761e31e221263306b0aeb7422cbb641 175 SUPERFAMILY SSF55718 44 139 8.24E-21 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AL549_RS18495 a761e31e221263306b0aeb7422cbb641 175 PIRSF PIRSF025550 1 174 8.6E-84 T 28-03-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT AL549_RS02875 9b5deae157f9c9ef5a8d873056dbddc4 218 SUPERFAMILY SSF141571 53 216 1.57E-38 T 28-03-2018 AL549_RS02875 9b5deae157f9c9ef5a8d873056dbddc4 218 Gene3D G3DSA:2.160.20.80 1 217 1.4E-44 T 28-03-2018 AL549_RS02875 9b5deae157f9c9ef5a8d873056dbddc4 218 SUPERFAMILY SSF141571 2 51 7.46E-10 T 28-03-2018 AL549_RS02875 9b5deae157f9c9ef5a8d873056dbddc4 218 Pfam PF00805 Pentapeptide repeats (8 copies) 55 83 0.0084 T 28-03-2018 IPR001646 Pentapeptide repeat AL549_RS02875 9b5deae157f9c9ef5a8d873056dbddc4 218 Pfam PF00805 Pentapeptide repeats (8 copies) 12 42 3.7E-6 T 28-03-2018 IPR001646 Pentapeptide repeat AL549_RS02875 9b5deae157f9c9ef5a8d873056dbddc4 218 Pfam PF13599 Pentapeptide repeats (9 copies) 97 166 1.2E-11 T 28-03-2018 IPR001646 Pentapeptide repeat AL549_RS17900 68beb30631440d9eb4a26af0cbd7184e 276 SUPERFAMILY SSF53901 1 275 9.01E-28 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS17900 68beb30631440d9eb4a26af0cbd7184e 276 Gene3D G3DSA:3.40.47.10 1 113 1.8E-13 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS17900 68beb30631440d9eb4a26af0cbd7184e 276 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 53 132 1.1E-15 T 28-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL549_RS17900 68beb30631440d9eb4a26af0cbd7184e 276 Gene3D G3DSA:3.40.47.10 114 276 1.4E-23 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS17900 68beb30631440d9eb4a26af0cbd7184e 276 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 192 275 6.5E-17 T 28-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL549_RS23750 2152cc5bc0e2f20e59c02c41d7689d9c 339 Pfam PF00814 Glycoprotease family 24 307 1.6E-103 T 28-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL549_RS23750 2152cc5bc0e2f20e59c02c41d7689d9c 339 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 2.3E-134 T 28-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL549_RS23750 2152cc5bc0e2f20e59c02c41d7689d9c 339 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 28-03-2018 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 AL549_RS23750 2152cc5bc0e2f20e59c02c41d7689d9c 339 SUPERFAMILY SSF53067 1 311 3.89E-43 T 28-03-2018 AL549_RS23750 2152cc5bc0e2f20e59c02c41d7689d9c 339 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 9.6E-125 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL549_RS23750 2152cc5bc0e2f20e59c02c41d7689d9c 339 Gene3D G3DSA:3.30.420.40 1 144 1.1E-41 T 28-03-2018 AL549_RS23750 2152cc5bc0e2f20e59c02c41d7689d9c 339 Gene3D G3DSA:3.30.420.40 145 287 3.1E-18 T 28-03-2018 AL549_RS23750 2152cc5bc0e2f20e59c02c41d7689d9c 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.5E-50 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL549_RS23750 2152cc5bc0e2f20e59c02c41d7689d9c 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.5E-50 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL549_RS23750 2152cc5bc0e2f20e59c02c41d7689d9c 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.5E-50 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL549_RS23750 2152cc5bc0e2f20e59c02c41d7689d9c 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.5E-50 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL549_RS23750 2152cc5bc0e2f20e59c02c41d7689d9c 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.5E-50 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL549_RS23750 2152cc5bc0e2f20e59c02c41d7689d9c 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.5E-50 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL549_RS23750 2152cc5bc0e2f20e59c02c41d7689d9c 339 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.28 T 28-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL549_RS08610 5636ab591e88a17aac089e29544034c7 379 Pfam PF00696 Amino acid kinase family 14 243 7.5E-45 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL549_RS08610 5636ab591e88a17aac089e29544034c7 379 Gene3D G3DSA:2.30.130.10 284 376 3.2E-30 T 28-03-2018 IPR002478 PUA domain GO:0003723 AL549_RS08610 5636ab591e88a17aac089e29544034c7 379 SUPERFAMILY SSF88697 286 376 3.37E-25 T 28-03-2018 IPR015947 PUA-like domain AL549_RS08610 5636ab591e88a17aac089e29544034c7 379 PIRSF PIRSF000729 9 378 2.2E-138 T 28-03-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AL549_RS08610 5636ab591e88a17aac089e29544034c7 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 14 268 36.186 T 28-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL549_RS08610 5636ab591e88a17aac089e29544034c7 379 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 2.3E-55 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL549_RS08610 5636ab591e88a17aac089e29544034c7 379 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 2.3E-55 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL549_RS08610 5636ab591e88a17aac089e29544034c7 379 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 2.3E-55 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL549_RS08610 5636ab591e88a17aac089e29544034c7 379 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 2.3E-55 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL549_RS08610 5636ab591e88a17aac089e29544034c7 379 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 2.3E-55 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL549_RS08610 5636ab591e88a17aac089e29544034c7 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 14 376 1.6E-148 T 28-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL549_RS08610 5636ab591e88a17aac089e29544034c7 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 28-03-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL549_RS08610 5636ab591e88a17aac089e29544034c7 379 Pfam PF01472 PUA domain 286 360 3.1E-25 T 28-03-2018 IPR002478 PUA domain GO:0003723 AL549_RS08610 5636ab591e88a17aac089e29544034c7 379 Gene3D G3DSA:3.40.1160.10 2 274 1.1E-61 T 28-03-2018 AL549_RS08610 5636ab591e88a17aac089e29544034c7 379 SUPERFAMILY SSF53633 14 265 5.11E-67 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL549_RS08610 5636ab591e88a17aac089e29544034c7 379 SMART SM00359 286 369 1.1E-20 T 28-03-2018 IPR002478 PUA domain GO:0003723 AL549_RS00370 e09b6c24a14c0f91a1d130deda5ba016 248 SUPERFAMILY SSF141371 24 137 1.92E-34 T 28-03-2018 AL549_RS00370 e09b6c24a14c0f91a1d130deda5ba016 248 Pfam PF12945 Flagellar protein YcgR 38 127 1.3E-14 T 28-03-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AL549_RS00370 e09b6c24a14c0f91a1d130deda5ba016 248 Gene3D G3DSA:2.40.10.220 137 248 2.2E-19 T 28-03-2018 AL549_RS00370 e09b6c24a14c0f91a1d130deda5ba016 248 Gene3D G3DSA:2.30.110.10 35 136 1.6E-23 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL549_RS00370 e09b6c24a14c0f91a1d130deda5ba016 248 SUPERFAMILY SSF141371 138 247 4.45E-33 T 28-03-2018 AL549_RS00370 e09b6c24a14c0f91a1d130deda5ba016 248 Pfam PF07238 PilZ domain 134 234 1.8E-15 T 28-03-2018 IPR009875 PilZ domain GO:0035438 AL549_RS21950 427f991f5e8bbf0e9d0e0ffb3d68035b 458 Gene3D G3DSA:3.40.50.720 2 139 2.5E-25 T 28-03-2018 AL549_RS21950 427f991f5e8bbf0e9d0e0ffb3d68035b 458 SUPERFAMILY SSF116726 136 223 1.57E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS21950 427f991f5e8bbf0e9d0e0ffb3d68035b 458 Pfam PF02254 TrkA-N domain 235 350 4.6E-25 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL549_RS21950 427f991f5e8bbf0e9d0e0ffb3d68035b 458 Pfam PF02254 TrkA-N domain 3 116 4.8E-29 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL549_RS21950 427f991f5e8bbf0e9d0e0ffb3d68035b 458 SUPERFAMILY SSF51735 1 151 9.24E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS21950 427f991f5e8bbf0e9d0e0ffb3d68035b 458 Gene3D G3DSA:3.40.50.720 233 366 1.4E-25 T 28-03-2018 AL549_RS21950 427f991f5e8bbf0e9d0e0ffb3d68035b 458 SUPERFAMILY SSF116726 390 437 2.75E-7 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS21950 427f991f5e8bbf0e9d0e0ffb3d68035b 458 Gene3D G3DSA:3.30.70.1450 367 458 1.2E-15 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS21950 427f991f5e8bbf0e9d0e0ffb3d68035b 458 Pfam PF02080 TrkA-C domain 156 225 4.2E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS21950 427f991f5e8bbf0e9d0e0ffb3d68035b 458 Pfam PF02080 TrkA-C domain 390 449 8.1E-10 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS21950 427f991f5e8bbf0e9d0e0ffb3d68035b 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 8.0E-34 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL549_RS21950 427f991f5e8bbf0e9d0e0ffb3d68035b 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 8.0E-34 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL549_RS21950 427f991f5e8bbf0e9d0e0ffb3d68035b 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 8.0E-34 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL549_RS21950 427f991f5e8bbf0e9d0e0ffb3d68035b 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 8.0E-34 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL549_RS21950 427f991f5e8bbf0e9d0e0ffb3d68035b 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 8.0E-34 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL549_RS21950 427f991f5e8bbf0e9d0e0ffb3d68035b 458 Gene3D G3DSA:3.30.70.1450 140 232 5.6E-15 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS21950 427f991f5e8bbf0e9d0e0ffb3d68035b 458 SUPERFAMILY SSF51735 232 376 3.02E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS03250 71043863c8640abd347bd3ed29b40576 566 Pfam PF06917 Periplasmic pectate lyase 24 549 1.2E-133 T 28-03-2018 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 AL549_RS03250 71043863c8640abd347bd3ed29b40576 566 PIRSF PIRSF001432 1 566 2.0E-278 T 28-03-2018 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 AL549_RS03250 71043863c8640abd347bd3ed29b40576 566 Gene3D G3DSA:1.50.10.20 8 508 2.8E-14 T 28-03-2018 AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 6 861 0.0 T 28-03-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 SUPERFAMILY SSF53732 15 595 4.19E-185 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 Pfam PF00694 Aconitase C-terminal domain 660 791 1.2E-30 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 32 859 5.6E-287 T 28-03-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 Gene3D G3DSA:3.20.19.10 623 862 5.7E-68 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 Gene3D G3DSA:3.40.1060.10 232 362 3.7E-40 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 Pfam PF00330 Aconitase family (aconitate hydratase) 74 537 4.6E-145 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 Gene3D G3DSA:3.30.499.10 363 551 4.0E-54 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 Gene3D G3DSA:3.30.499.10 5 231 2.7E-58 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 SUPERFAMILY SSF52016 602 860 6.08E-68 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 PRINTS PR00415 Aconitase family signature 195 208 6.8E-26 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 PRINTS PR00415 Aconitase family signature 406 417 6.8E-26 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 PRINTS PR00415 Aconitase family signature 142 155 6.8E-26 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 PRINTS PR00415 Aconitase family signature 166 174 6.8E-26 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 PRINTS PR00415 Aconitase family signature 271 284 6.8E-26 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 PRINTS PR00415 Aconitase family signature 209 224 6.8E-26 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 PRINTS PR00415 Aconitase family signature 285 298 6.8E-26 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 PRINTS PR00415 Aconitase family signature 364 378 6.8E-26 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS11980 8e4f856ee947999221d1b9b009b72e9a 866 PRINTS PR00415 Aconitase family signature 468 481 6.8E-26 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS11765 5b97ec25dfdff0ce02dd628348bad451 364 Pfam PF05971 Protein of unknown function (DUF890) 42 352 2.7E-122 T 28-03-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 AL549_RS11765 5b97ec25dfdff0ce02dd628348bad451 364 SUPERFAMILY SSF53335 80 351 4.64E-27 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS11765 5b97ec25dfdff0ce02dd628348bad451 364 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 42 354 52.968 T 28-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AL549_RS11765 5b97ec25dfdff0ce02dd628348bad451 364 PIRSF PIRSF029038 31 364 1.7E-158 T 28-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AL549_RS11765 5b97ec25dfdff0ce02dd628348bad451 364 Gene3D G3DSA:3.40.50.150 75 352 6.9E-48 T 28-03-2018 AL549_RS02885 c16615dd0982e45b88f9d07440622ab9 328 SUPERFAMILY SSF52283 1 124 7.02E-20 T 28-03-2018 AL549_RS02885 c16615dd0982e45b88f9d07440622ab9 328 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 289 8.4E-51 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL549_RS02885 c16615dd0982e45b88f9d07440622ab9 328 Gene3D G3DSA:3.40.50.720 1 133 1.2E-34 T 28-03-2018 AL549_RS02885 c16615dd0982e45b88f9d07440622ab9 328 SUPERFAMILY SSF51735 106 289 1.14E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS02885 c16615dd0982e45b88f9d07440622ab9 328 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 25 320 1.4E-13 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AL549_RS02885 c16615dd0982e45b88f9d07440622ab9 328 Gene3D G3DSA:3.40.50.720 134 290 1.8E-36 T 28-03-2018 AL549_RS19710 11664c5354e9d5d9bf5a430c67eae093 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 28-03-2018 IPR019897 RidA, conserved site AL549_RS19710 11664c5354e9d5d9bf5a430c67eae093 129 SUPERFAMILY SSF55298 2 128 2.36E-44 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL549_RS19710 11664c5354e9d5d9bf5a430c67eae093 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 2.0E-43 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AL549_RS19710 11664c5354e9d5d9bf5a430c67eae093 129 Gene3D G3DSA:3.30.1330.40 1 129 1.2E-45 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL549_RS19710 11664c5354e9d5d9bf5a430c67eae093 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 1.9E-52 T 28-03-2018 IPR006056 RidA family AL549_RS00600 94e318f1dec8ce9353d3b3577c6ad98f 514 SUPERFAMILY SSF56634 20 508 1.7E-188 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL549_RS00600 94e318f1dec8ce9353d3b3577c6ad98f 514 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 349 357 - T 28-03-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL549_RS00600 94e318f1dec8ce9353d3b3577c6ad98f 514 ProSitePatterns PS00438 Catalase proximal active site signature. 61 77 - T 28-03-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL549_RS00600 94e318f1dec8ce9353d3b3577c6ad98f 514 PRINTS PR00067 Catalase signature 38 61 4.7E-69 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL549_RS00600 94e318f1dec8ce9353d3b3577c6ad98f 514 PRINTS PR00067 Catalase signature 122 139 4.7E-69 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL549_RS00600 94e318f1dec8ce9353d3b3577c6ad98f 514 PRINTS PR00067 Catalase signature 336 362 4.7E-69 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL549_RS00600 94e318f1dec8ce9353d3b3577c6ad98f 514 PRINTS PR00067 Catalase signature 141 159 4.7E-69 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL549_RS00600 94e318f1dec8ce9353d3b3577c6ad98f 514 PRINTS PR00067 Catalase signature 304 331 4.7E-69 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL549_RS00600 94e318f1dec8ce9353d3b3577c6ad98f 514 PRINTS PR00067 Catalase signature 101 119 4.7E-69 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL549_RS00600 94e318f1dec8ce9353d3b3577c6ad98f 514 Gene3D G3DSA:2.40.180.10 15 373 1.2E-147 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL549_RS00600 94e318f1dec8ce9353d3b3577c6ad98f 514 Pfam PF06628 Catalase-related immune-responsive 442 500 4.6E-18 T 28-03-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL549_RS00600 94e318f1dec8ce9353d3b3577c6ad98f 514 PIRSF PIRSF038928 15 507 2.2E-185 T 28-03-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL549_RS00600 94e318f1dec8ce9353d3b3577c6ad98f 514 Pfam PF00199 Catalase 25 390 5.6E-166 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL549_RS00600 94e318f1dec8ce9353d3b3577c6ad98f 514 SMART SM01060 25 417 8.8E-241 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL549_RS16235 5e50bca2c2ad87947a01a0daf2011bc7 714 PIRSF PIRSF006107 1 714 0.0 T 28-03-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL549_RS16235 5e50bca2c2ad87947a01a0daf2011bc7 714 Gene3D G3DSA:3.40.50.300 1 235 2.7E-26 T 28-03-2018 AL549_RS16235 5e50bca2c2ad87947a01a0daf2011bc7 714 Gene3D G3DSA:3.40.50.10750 529 682 2.7E-65 T 28-03-2018 AL549_RS16235 5e50bca2c2ad87947a01a0daf2011bc7 714 SUPERFAMILY SSF53659 392 709 3.08E-96 T 28-03-2018 AL549_RS16235 5e50bca2c2ad87947a01a0daf2011bc7 714 SUPERFAMILY SSF75138 229 353 4.58E-24 T 28-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like AL549_RS16235 5e50bca2c2ad87947a01a0daf2011bc7 714 SUPERFAMILY SSF52540 1 240 1.93E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16235 5e50bca2c2ad87947a01a0daf2011bc7 714 Pfam PF13500 AAA domain 3 229 7.7E-50 T 28-03-2018 AL549_RS16235 5e50bca2c2ad87947a01a0daf2011bc7 714 Pfam PF07085 DRTGG domain 233 344 1.3E-27 T 28-03-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL549_RS16235 5e50bca2c2ad87947a01a0daf2011bc7 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 6.9E-125 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL549_RS16235 5e50bca2c2ad87947a01a0daf2011bc7 714 Gene3D G3DSA:3.40.1390.20 236 366 1.2E-28 T 28-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like AL549_RS16235 5e50bca2c2ad87947a01a0daf2011bc7 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 7.7E-132 T 28-03-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL549_RS00185 0b311109482eb8df8fa6db4a7e58bec0 318 SUPERFAMILY SSF52540 6 290 1.27E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS00185 0b311109482eb8df8fa6db4a7e58bec0 318 Gene3D G3DSA:1.10.8.300 199 315 3.4E-36 T 28-03-2018 AL549_RS00185 0b311109482eb8df8fa6db4a7e58bec0 318 Gene3D G3DSA:3.40.50.300 17 183 6.6E-27 T 28-03-2018 AL549_RS00185 0b311109482eb8df8fa6db4a7e58bec0 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 2.4E-62 T 28-03-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AL549_RS00185 0b311109482eb8df8fa6db4a7e58bec0 318 PIRSF PIRSF002849 1 318 1.4E-127 T 28-03-2018 AL549_RS05470 b3147c7d951587e251518b618997911c 442 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 2.0E-147 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL549_RS05470 b3147c7d951587e251518b618997911c 442 PIRSF PIRSF004539 1 441 6.1E-182 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL549_RS05470 b3147c7d951587e251518b618997911c 442 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 440 3.4E-145 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL549_RS20770 6bc261e45c19e1e5b42f9c9383fe3a1d 593 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 592 38.413 T 28-03-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 AL549_RS20770 6bc261e45c19e1e5b42f9c9383fe3a1d 593 SUPERFAMILY SSF74863 34 147 6.67E-41 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AL549_RS20770 6bc261e45c19e1e5b42f9c9383fe3a1d 593 Gene3D G3DSA:2.60.40.1250 29 152 1.8E-32 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AL549_RS20770 6bc261e45c19e1e5b42f9c9383fe3a1d 593 Pfam PF11412 Disulphide bond corrector protein DsbC 36 146 4.9E-30 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AL549_RS20770 6bc261e45c19e1e5b42f9c9383fe3a1d 593 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 200 399 1.2E-17 T 28-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AL549_RS20770 6bc261e45c19e1e5b42f9c9383fe3a1d 593 SUPERFAMILY SSF52833 475 590 6.59E-22 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS20770 6bc261e45c19e1e5b42f9c9383fe3a1d 593 Pfam PF13899 Thioredoxin-like 484 562 1.8E-13 T 28-03-2018 AL549_RS20770 6bc261e45c19e1e5b42f9c9383fe3a1d 593 ProSitePatterns PS00194 Thioredoxin family active site. 500 518 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL549_RS20770 6bc261e45c19e1e5b42f9c9383fe3a1d 593 Gene3D G3DSA:3.40.30.10 482 593 1.1E-18 T 28-03-2018 AL549_RS17355 44e2754f0b523fdb0eeab9d078a34121 166 Pfam PF10975 Protein of unknown function (DUF2802) 68 135 2.1E-22 T 28-03-2018 IPR021244 Protein of unknown function DUF2802 AL549_RS17355 44e2754f0b523fdb0eeab9d078a34121 166 Gene3D G3DSA:1.20.5.110 30 98 1.2E-4 T 28-03-2018 AL549_RS04765 bf34fda802940d424914239a8e32323f 194 SUPERFAMILY SSF48498 80 192 2.73E-19 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL549_RS04765 bf34fda802940d424914239a8e32323f 194 Gene3D G3DSA:1.10.357.10 61 193 1.2E-20 T 28-03-2018 AL549_RS04765 bf34fda802940d424914239a8e32323f 194 SUPERFAMILY SSF46689 2 75 2.0E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS04765 bf34fda802940d424914239a8e32323f 194 Gene3D G3DSA:1.10.10.60 6 60 2.6E-17 T 28-03-2018 AL549_RS04765 bf34fda802940d424914239a8e32323f 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.3E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS04765 bf34fda802940d424914239a8e32323f 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.3E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS04765 bf34fda802940d424914239a8e32323f 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 54 1.2E-12 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS02955 4e0526f3ac12dfd5afbbfc75e360aa83 287 SUPERFAMILY SSF103481 39 145 7.32E-6 T 28-03-2018 AL549_RS02955 4e0526f3ac12dfd5afbbfc75e360aa83 287 SUPERFAMILY SSF103481 186 284 7.06E-11 T 28-03-2018 AL549_RS02955 4e0526f3ac12dfd5afbbfc75e360aa83 287 Pfam PF00892 EamA-like transporter family 6 141 2.3E-10 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS02955 4e0526f3ac12dfd5afbbfc75e360aa83 287 Pfam PF00892 EamA-like transporter family 154 282 4.0E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS05830 c0f11e145ac8c349aa4a3af49dee674b 544 Gene3D G3DSA:3.90.400.10 105 170 5.3E-31 T 28-03-2018 AL549_RS05830 c0f11e145ac8c349aa4a3af49dee674b 544 SUPERFAMILY SSF51011 466 543 1.21E-19 T 28-03-2018 AL549_RS05830 c0f11e145ac8c349aa4a3af49dee674b 544 Pfam PF00128 Alpha amylase, catalytic domain 28 363 2.7E-123 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS05830 c0f11e145ac8c349aa4a3af49dee674b 544 Gene3D G3DSA:2.60.40.1180 463 544 2.1E-19 T 28-03-2018 AL549_RS05830 c0f11e145ac8c349aa4a3af49dee674b 544 Pfam PF16657 Maltogenic Amylase, C-terminal domain 466 539 3.1E-11 T 28-03-2018 IPR032091 Maltogenic Amylase, C-terminal AL549_RS05830 c0f11e145ac8c349aa4a3af49dee674b 544 Gene3D G3DSA:3.20.20.80 330 462 1.4E-23 T 28-03-2018 AL549_RS05830 c0f11e145ac8c349aa4a3af49dee674b 544 SMART SM00642 13 405 2.1E-156 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS05830 c0f11e145ac8c349aa4a3af49dee674b 544 Gene3D G3DSA:3.20.20.470 171 329 4.7E-37 T 28-03-2018 AL549_RS05830 c0f11e145ac8c349aa4a3af49dee674b 544 Gene3D G3DSA:3.20.20.470 1 104 4.8E-35 T 28-03-2018 AL549_RS05830 c0f11e145ac8c349aa4a3af49dee674b 544 SUPERFAMILY SSF51445 4 463 1.3E-158 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS19080 88557ca0874a0bd8ca92620ce2c5750f 349 Gene3D G3DSA:3.30.250.10 269 326 1.7E-23 T 28-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AL549_RS19080 88557ca0874a0bd8ca92620ce2c5750f 349 PRINTS PR00142 RecA protein signature 127 156 1.7E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL549_RS19080 88557ca0874a0bd8ca92620ce2c5750f 349 PRINTS PR00142 RecA protein signature 243 272 1.7E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL549_RS19080 88557ca0874a0bd8ca92620ce2c5750f 349 PRINTS PR00142 RecA protein signature 210 238 1.7E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL549_RS19080 88557ca0874a0bd8ca92620ce2c5750f 349 PRINTS PR00142 RecA protein signature 297 314 1.7E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL549_RS19080 88557ca0874a0bd8ca92620ce2c5750f 349 PRINTS PR00142 RecA protein signature 93 122 1.7E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL549_RS19080 88557ca0874a0bd8ca92620ce2c5750f 349 PRINTS PR00142 RecA protein signature 165 194 1.7E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL549_RS19080 88557ca0874a0bd8ca92620ce2c5750f 349 Gene3D G3DSA:3.40.50.300 26 268 7.0E-46 T 28-03-2018 AL549_RS19080 88557ca0874a0bd8ca92620ce2c5750f 349 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 4.1E-169 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL549_RS19080 88557ca0874a0bd8ca92620ce2c5750f 349 Pfam PF00154 recA bacterial DNA recombination protein 7 267 9.3E-143 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL549_RS19080 88557ca0874a0bd8ca92620ce2c5750f 349 Hamap MF_00268 Protein RecA [recA]. 5 329 50.162 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL549_RS19080 88557ca0874a0bd8ca92620ce2c5750f 349 ProSitePatterns PS00321 recA signature. 213 221 - T 28-03-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AL549_RS19080 88557ca0874a0bd8ca92620ce2c5750f 349 SMART SM00382 57 228 1.4E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS19080 88557ca0874a0bd8ca92620ce2c5750f 349 SUPERFAMILY SSF54752 269 325 4.58E-20 T 28-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AL549_RS19080 88557ca0874a0bd8ca92620ce2c5750f 349 SUPERFAMILY SSF52540 4 266 3.81E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS23510 5436453ded6aa066f8a741457f7ce949 241 SUPERFAMILY SSF69593 5 235 3.66E-56 T 28-03-2018 AL549_RS23510 5436453ded6aa066f8a741457f7ce949 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 3.2E-43 T 28-03-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 AL549_RS23510 5436453ded6aa066f8a741457f7ce949 241 Gene3D G3DSA:3.40.1130.10 30 241 2.4E-40 T 28-03-2018 AL549_RS23510 5436453ded6aa066f8a741457f7ce949 241 SMART SM00563 67 182 3.7E-39 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS23510 5436453ded6aa066f8a741457f7ce949 241 Pfam PF01553 Acyltransferase 58 180 2.5E-31 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS01050 e92965edf9825f09c20824266beb2a56 242 SUPERFAMILY SSF53167 4 220 1.96E-67 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL549_RS01050 e92965edf9825f09c20824266beb2a56 242 Gene3D G3DSA:3.40.50.1580 10 241 6.1E-45 T 28-03-2018 AL549_RS01050 e92965edf9825f09c20824266beb2a56 242 Pfam PF01048 Phosphorylase superfamily 17 199 1.5E-31 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL549_RS01520 c4e597ac8b87ed99f0a173b26a18d6c4 441 SUPERFAMILY SSF109604 25 194 7.59E-14 T 28-03-2018 AL549_RS01520 c4e597ac8b87ed99f0a173b26a18d6c4 441 SUPERFAMILY SSF109604 241 404 1.38E-30 T 28-03-2018 AL549_RS01520 c4e597ac8b87ed99f0a173b26a18d6c4 441 TIGRFAM TIGR00277 HDIG: HDIG domain 248 338 3.8E-10 T 28-03-2018 IPR006675 HDIG domain AL549_RS01520 c4e597ac8b87ed99f0a173b26a18d6c4 441 SMART SM00471 30 159 15.0 T 28-03-2018 IPR003607 HD/PDEase domain AL549_RS01520 c4e597ac8b87ed99f0a173b26a18d6c4 441 SMART SM00471 244 379 4.4E-12 T 28-03-2018 IPR003607 HD/PDEase domain AL549_RS01520 c4e597ac8b87ed99f0a173b26a18d6c4 441 Gene3D G3DSA:1.10.3210.10 18 197 2.7E-18 T 28-03-2018 AL549_RS01520 c4e597ac8b87ed99f0a173b26a18d6c4 441 Gene3D G3DSA:1.10.3210.10 204 419 7.8E-37 T 28-03-2018 AL549_RS01520 c4e597ac8b87ed99f0a173b26a18d6c4 441 Pfam PF01966 HD domain 248 369 7.2E-20 T 28-03-2018 IPR006674 HD domain AL549_RS01520 c4e597ac8b87ed99f0a173b26a18d6c4 441 Pfam PF01966 HD domain 37 148 1.9E-5 T 28-03-2018 IPR006674 HD domain AL549_RS12160 935706394b381d77a811bb924dfac1ac 388 Gene3D G3DSA:3.40.1710.10 41 197 4.4E-25 T 28-03-2018 AL549_RS12160 935706394b381d77a811bb924dfac1ac 388 Pfam PF12698 ABC-2 family transporter protein 15 369 3.3E-42 T 28-03-2018 AL549_RS01890 eae186474b07acc818598f3c44019a7c 314 Gene3D G3DSA:1.10.10.10 22 99 9.9E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01890 eae186474b07acc818598f3c44019a7c 314 SUPERFAMILY SSF53850 110 308 2.53E-30 T 28-03-2018 AL549_RS01890 eae186474b07acc818598f3c44019a7c 314 SUPERFAMILY SSF46785 22 105 7.26E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01890 eae186474b07acc818598f3c44019a7c 314 Gene3D G3DSA:3.40.190.10 107 191 1.3E-4 T 28-03-2018 AL549_RS01890 eae186474b07acc818598f3c44019a7c 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 82 5.3E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01890 eae186474b07acc818598f3c44019a7c 314 Gene3D G3DSA:3.40.190.10 192 275 4.6E-13 T 28-03-2018 AL549_RS01890 eae186474b07acc818598f3c44019a7c 314 Pfam PF03466 LysR substrate binding domain 107 305 4.6E-28 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS10200 38289e92fb2a86ca459ed31036915aad 286 SUPERFAMILY SSF81324 22 235 1.64E-53 T 28-03-2018 AL549_RS10200 38289e92fb2a86ca459ed31036915aad 286 Gene3D G3DSA:1.10.287.70 149 197 2.6E-14 T 28-03-2018 AL549_RS10200 38289e92fb2a86ca459ed31036915aad 286 PRINTS PR00169 Potassium channel signature 120 146 3.3E-36 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL549_RS10200 38289e92fb2a86ca459ed31036915aad 286 PRINTS PR00169 Potassium channel signature 149 172 3.3E-36 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL549_RS10200 38289e92fb2a86ca459ed31036915aad 286 PRINTS PR00169 Potassium channel signature 178 200 3.3E-36 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL549_RS10200 38289e92fb2a86ca459ed31036915aad 286 PRINTS PR00169 Potassium channel signature 58 81 3.3E-36 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL549_RS10200 38289e92fb2a86ca459ed31036915aad 286 PRINTS PR00169 Potassium channel signature 207 233 3.3E-36 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL549_RS10200 38289e92fb2a86ca459ed31036915aad 286 PRINTS PR00169 Potassium channel signature 84 104 3.3E-36 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL549_RS10200 38289e92fb2a86ca459ed31036915aad 286 PRINTS PR00169 Potassium channel signature 16 44 3.3E-36 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL549_RS10200 38289e92fb2a86ca459ed31036915aad 286 Gene3D G3DSA:1.20.5.110 199 235 1.9E-13 T 28-03-2018 AL549_RS10200 38289e92fb2a86ca459ed31036915aad 286 Gene3D G3DSA:1.20.120.350 21 148 6.5E-28 T 28-03-2018 AL549_RS10200 38289e92fb2a86ca459ed31036915aad 286 Pfam PF00520 Ion transport protein 24 235 2.8E-30 T 28-03-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 AL549_RS04065 8ab9b080d65fcfad73f83d250cc749c2 590 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 266 5.5E-74 T 28-03-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 AL549_RS04065 8ab9b080d65fcfad73f83d250cc749c2 590 Gene3D G3DSA:3.40.50.1820 226 556 2.2E-15 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS04065 8ab9b080d65fcfad73f83d250cc749c2 590 SUPERFAMILY SSF53474 225 526 2.08E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS04065 8ab9b080d65fcfad73f83d250cc749c2 590 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 55 584 1.0E-247 T 28-03-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 AL549_RS04330 7034163469b90f451b3419f408237225 308 SMART SM00382 30 212 3.0E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS04330 7034163469b90f451b3419f408237225 308 Gene3D G3DSA:3.40.50.300 2 244 1.4E-70 T 28-03-2018 AL549_RS04330 7034163469b90f451b3419f408237225 308 SUPERFAMILY SSF52540 4 227 3.33E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS04330 7034163469b90f451b3419f408237225 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS04330 7034163469b90f451b3419f408237225 308 Pfam PF00005 ABC transporter 22 165 5.0E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS08270 4513327b545e4f904be7458f522e3930 141 Gene3D G3DSA:3.30.70.141 56 140 2.6E-35 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL549_RS08270 4513327b545e4f904be7458f522e3930 141 Gene3D G3DSA:3.30.70.141 1 55 6.7E-19 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL549_RS08270 4513327b545e4f904be7458f522e3930 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.7E-38 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL549_RS08270 4513327b545e4f904be7458f522e3930 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.7E-38 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL549_RS08270 4513327b545e4f904be7458f522e3930 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.7E-38 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL549_RS08270 4513327b545e4f904be7458f522e3930 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.7E-38 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL549_RS08270 4513327b545e4f904be7458f522e3930 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.7E-38 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL549_RS08270 4513327b545e4f904be7458f522e3930 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 3.5E-58 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL549_RS08270 4513327b545e4f904be7458f522e3930 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 28-03-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL549_RS08270 4513327b545e4f904be7458f522e3930 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.783 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL549_RS08270 4513327b545e4f904be7458f522e3930 141 SMART SM00562 3 140 4.5E-91 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL549_RS08270 4513327b545e4f904be7458f522e3930 141 SUPERFAMILY SSF54919 1 140 1.02E-60 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL549_RS10560 c705cf4a3ef05851dbf34f16600b3f8e 377 SUPERFAMILY SSF47240 3 341 2.08E-112 T 28-03-2018 IPR009078 Ferritin-like superfamily AL549_RS10560 c705cf4a3ef05851dbf34f16600b3f8e 377 Gene3D G3DSA:1.10.620.20 1 347 5.7E-115 T 28-03-2018 AL549_RS10560 c705cf4a3ef05851dbf34f16600b3f8e 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 28-03-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL549_RS10560 c705cf4a3ef05851dbf34f16600b3f8e 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 1.4E-48 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL549_RS04535 800ed7999042e5dc1aaef65d318f8b3a 797 Pfam PF00563 EAL domain 535 769 6.5E-71 T 28-03-2018 IPR001633 EAL domain AL549_RS04535 800ed7999042e5dc1aaef65d318f8b3a 797 Pfam PF00990 Diguanylate cyclase, GGDEF domain 362 514 5.9E-35 T 28-03-2018 IPR000160 GGDEF domain AL549_RS04535 800ed7999042e5dc1aaef65d318f8b3a 797 SUPERFAMILY SSF141868 535 786 1.24E-83 T 28-03-2018 IPR001633 EAL domain AL549_RS04535 800ed7999042e5dc1aaef65d318f8b3a 797 Gene3D G3DSA:3.30.70.270 356 525 9.7E-44 T 28-03-2018 AL549_RS04535 800ed7999042e5dc1aaef65d318f8b3a 797 Gene3D G3DSA:3.20.20.450 526 777 1.8E-89 T 28-03-2018 IPR001633 EAL domain AL549_RS04535 800ed7999042e5dc1aaef65d318f8b3a 797 SMART SM00052 529 774 2.4E-97 T 28-03-2018 IPR001633 EAL domain AL549_RS04535 800ed7999042e5dc1aaef65d318f8b3a 797 SMART SM00267 351 519 5.1E-42 T 28-03-2018 IPR000160 GGDEF domain AL549_RS04535 800ed7999042e5dc1aaef65d318f8b3a 797 SUPERFAMILY SSF55073 367 519 1.88E-33 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS04535 800ed7999042e5dc1aaef65d318f8b3a 797 SUPERFAMILY SSF158472 304 353 1.29E-11 T 28-03-2018 AL549_RS04535 800ed7999042e5dc1aaef65d318f8b3a 797 Pfam PF00672 HAMP domain 303 353 1.1E-12 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS04535 800ed7999042e5dc1aaef65d318f8b3a 797 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 360 519 4.6E-29 T 28-03-2018 IPR000160 GGDEF domain AL549_RS04535 800ed7999042e5dc1aaef65d318f8b3a 797 SMART SM00304 303 356 6.2E-14 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS04535 800ed7999042e5dc1aaef65d318f8b3a 797 Pfam PF14827 Double sensory domain of two-component sensor kinase 47 202 1.0E-10 T 28-03-2018 IPR029150 Double Cache domain 3 AL549_RS15830 d8f20a9e4f4bf66ceeecf6dc610f5739 191 Gene3D G3DSA:3.10.560.10 109 188 1.5E-14 T 28-03-2018 AL549_RS15830 d8f20a9e4f4bf66ceeecf6dc610f5739 191 Pfam PF10531 SLBB domain 119 162 2.4E-12 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS15830 d8f20a9e4f4bf66ceeecf6dc610f5739 191 Gene3D G3DSA:3.30.1950.10 47 108 6.2E-16 T 28-03-2018 AL549_RS15830 d8f20a9e4f4bf66ceeecf6dc610f5739 191 Pfam PF02563 Polysaccharide biosynthesis/export protein 40 113 4.1E-18 T 28-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AL549_RS00550 4b0e5d40ecd98758f14ad036592b3775 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.46 T 28-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AL549_RS00550 4b0e5d40ecd98758f14ad036592b3775 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AL549_RS00550 4b0e5d40ecd98758f14ad036592b3775 397 SUPERFAMILY SSF53383 4 395 2.15E-123 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS00550 4b0e5d40ecd98758f14ad036592b3775 397 Pfam PF00155 Aminotransferase class I and II 43 387 1.1E-76 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL549_RS00550 4b0e5d40ecd98758f14ad036592b3775 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 2.8E-209 T 28-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AL549_RS00550 4b0e5d40ecd98758f14ad036592b3775 397 Gene3D G3DSA:3.40.640.10 51 288 1.8E-56 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS00550 4b0e5d40ecd98758f14ad036592b3775 397 Gene3D G3DSA:3.90.1150.10 289 396 2.8E-28 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS20415 0e2eb11ff9630fdeadcaba60ce183c70 192 Pfam PF00117 Glutamine amidotransferase class-I 4 190 8.5E-54 T 28-03-2018 IPR017926 Glutamine amidotransferase AL549_RS20415 0e2eb11ff9630fdeadcaba60ce183c70 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.2E-13 T 28-03-2018 AL549_RS20415 0e2eb11ff9630fdeadcaba60ce183c70 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.2E-13 T 28-03-2018 AL549_RS20415 0e2eb11ff9630fdeadcaba60ce183c70 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.2E-13 T 28-03-2018 AL549_RS20415 0e2eb11ff9630fdeadcaba60ce183c70 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 5.3E-5 T 28-03-2018 AL549_RS20415 0e2eb11ff9630fdeadcaba60ce183c70 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 5.3E-5 T 28-03-2018 AL549_RS20415 0e2eb11ff9630fdeadcaba60ce183c70 192 SUPERFAMILY SSF52317 1 191 5.94E-53 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS20415 0e2eb11ff9630fdeadcaba60ce183c70 192 Gene3D G3DSA:3.40.50.880 1 192 4.0E-56 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS20415 0e2eb11ff9630fdeadcaba60ce183c70 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 8.4E-85 T 28-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL549_RS20415 0e2eb11ff9630fdeadcaba60ce183c70 192 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.9E-36 T 28-03-2018 AL549_RS20415 0e2eb11ff9630fdeadcaba60ce183c70 192 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.9E-36 T 28-03-2018 AL549_RS20415 0e2eb11ff9630fdeadcaba60ce183c70 192 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.9E-36 T 28-03-2018 AL549_RS20415 0e2eb11ff9630fdeadcaba60ce183c70 192 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.9E-36 T 28-03-2018 AL549_RS20415 0e2eb11ff9630fdeadcaba60ce183c70 192 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.9E-36 T 28-03-2018 AL549_RS20415 0e2eb11ff9630fdeadcaba60ce183c70 192 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.9E-36 T 28-03-2018 AL549_RS16670 74516f44e3fec93b3e347ebe97d83173 73 PRINTS PR00050 Cold shock protein signature 4 19 1.4E-14 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL549_RS16670 74516f44e3fec93b3e347ebe97d83173 73 PRINTS PR00050 Cold shock protein signature 40 58 1.4E-14 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL549_RS16670 74516f44e3fec93b3e347ebe97d83173 73 PRINTS PR00050 Cold shock protein signature 25 34 1.4E-14 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL549_RS16670 74516f44e3fec93b3e347ebe97d83173 73 PIRSF PIRSF002599 1 73 3.1E-23 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 AL549_RS16670 74516f44e3fec93b3e347ebe97d83173 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 1.3E-40 T 28-03-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 AL549_RS16670 74516f44e3fec93b3e347ebe97d83173 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 28-03-2018 IPR019844 Cold-shock conserved site AL549_RS16670 74516f44e3fec93b3e347ebe97d83173 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.9E-28 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL549_RS16670 74516f44e3fec93b3e347ebe97d83173 73 Gene3D G3DSA:2.40.50.140 1 73 8.9E-26 T 28-03-2018 AL549_RS16670 74516f44e3fec93b3e347ebe97d83173 73 SUPERFAMILY SSF50249 1 67 7.28E-23 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS16670 74516f44e3fec93b3e347ebe97d83173 73 SMART SM00357 3 67 1.3E-24 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AL549_RS16760 7da47c34f4d05a20179ad8bccc978de3 758 Pfam PF01228 Glycine radical 628 739 2.0E-43 T 28-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AL549_RS16760 7da47c34f4d05a20179ad8bccc978de3 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL549_RS16760 7da47c34f4d05a20179ad8bccc978de3 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AL549_RS16760 7da47c34f4d05a20179ad8bccc978de3 758 Gene3D G3DSA:3.20.70.20 1 758 1.8E-291 T 28-03-2018 AL549_RS16760 7da47c34f4d05a20179ad8bccc978de3 758 PIRSF PIRSF000379 5 758 0.0 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AL549_RS16760 7da47c34f4d05a20179ad8bccc978de3 758 SUPERFAMILY SSF51998 4 757 4.81E-287 T 28-03-2018 AL549_RS16760 7da47c34f4d05a20179ad8bccc978de3 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 6.2E-204 T 28-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AL549_RS20065 0b1b4134655f24e543ef93502f8e2470 123 Pfam PF01250 Ribosomal protein S6 3 91 1.1E-28 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20065 0b1b4134655f24e543ef93502f8e2470 123 Gene3D G3DSA:3.30.70.60 1 100 3.6E-31 T 28-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AL549_RS20065 0b1b4134655f24e543ef93502f8e2470 123 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 28-03-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL549_RS20065 0b1b4134655f24e543ef93502f8e2470 123 SUPERFAMILY SSF54995 1 103 1.09E-38 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20065 0b1b4134655f24e543ef93502f8e2470 123 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.04 T 28-03-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL549_RS20065 0b1b4134655f24e543ef93502f8e2470 123 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 6.8E-39 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS17895 d26950ab3960314b84237a6443399df4 149 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 30.192 T 28-03-2018 IPR003791 Protein of unknown function UPF0178 AL549_RS17895 d26950ab3960314b84237a6443399df4 149 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 6.0E-48 T 28-03-2018 IPR003791 Protein of unknown function UPF0178 AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 Gene3D G3DSA:3.30.450.20 96 263 2.9E-21 T 28-03-2018 AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 378 491 1.5E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 173 252 7.5E-7 T 28-03-2018 IPR000014 PAS domain AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 Gene3D G3DSA:1.10.287.130 264 327 3.2E-21 T 28-03-2018 AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 Gene3D G3DSA:3.40.50.2300 514 715 9.3E-35 T 28-03-2018 AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 Pfam PF00512 His Kinase A (phospho-acceptor) domain 266 331 9.6E-21 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 SUPERFAMILY SSF47384 248 331 6.28E-23 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 SUPERFAMILY SSF52172 517 650 7.68E-32 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 SMART SM00388 265 331 4.5E-24 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 2.7E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 489 2.7E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 2.7E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 470 2.7E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 SUPERFAMILY SSF55874 320 488 1.57E-42 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 SUPERFAMILY SSF55785 125 247 8.9E-15 T 28-03-2018 IPR000014 PAS domain AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 Pfam PF00072 Response regulator receiver domain 519 628 4.4E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 SMART SM00387 378 492 3.5E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 Gene3D G3DSA:3.30.565.10 335 500 1.1E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 SMART SM00448 517 630 8.2E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 SMART SM00086 202 245 0.003 T 28-03-2018 IPR001610 PAC motif AL549_RS10125 f01d6797ea01656e96caf4bdee4292c7 718 Pfam PF08447 PAS fold 166 239 4.9E-17 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 AL549_RS15515 3adc4bb3cba207b43706d456a0d60101 269 Gene3D G3DSA:1.10.10.10 111 161 0.038 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS15515 3adc4bb3cba207b43706d456a0d60101 269 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 13 66 7.4E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL549_RS15515 3adc4bb3cba207b43706d456a0d60101 269 SMART SM00530 12 66 0.003 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL549_RS15515 3adc4bb3cba207b43706d456a0d60101 269 Gene3D G3DSA:1.10.260.40 6 88 1.2E-7 T 28-03-2018 AL549_RS15515 3adc4bb3cba207b43706d456a0d60101 269 SUPERFAMILY SSF47413 5 68 9.96E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS17995 6bc050183bd74d0d95a6f4e70ee9b4b6 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 1.7E-21 T 28-03-2018 IPR007495 (Na+)-NQR maturation factor NqrM AL549_RS09290 787a69e3bdb9d9b66f2f47f1a8acd313 308 Gene3D G3DSA:3.40.50.720 5 308 8.1E-39 T 28-03-2018 AL549_RS09290 787a69e3bdb9d9b66f2f47f1a8acd313 308 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 230 6.4E-21 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL549_RS09290 787a69e3bdb9d9b66f2f47f1a8acd313 308 SUPERFAMILY SSF51735 5 301 1.17E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS09290 787a69e3bdb9d9b66f2f47f1a8acd313 308 Pfam PF08338 Domain of unknown function (DUF1731) 257 303 1.6E-15 T 28-03-2018 IPR013549 Domain of unknown function DUF1731 AL549_RS09290 787a69e3bdb9d9b66f2f47f1a8acd313 308 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 7 300 1.7E-102 T 28-03-2018 IPR010099 Epimerase family protein SDR39U1 AL549_RS04845 a7804e7c54349678d1f355b33eca1525 302 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 295 3.9E-29 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AL549_RS04845 a7804e7c54349678d1f355b33eca1525 302 Gene3D G3DSA:1.10.1040.10 179 301 5.9E-28 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL549_RS04845 a7804e7c54349678d1f355b33eca1525 302 Gene3D G3DSA:3.40.50.720 2 178 9.9E-37 T 28-03-2018 AL549_RS04845 a7804e7c54349678d1f355b33eca1525 302 PIRSF PIRSF000103 1 302 8.9E-79 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL549_RS04845 a7804e7c54349678d1f355b33eca1525 302 SUPERFAMILY SSF51735 3 167 1.75E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS04845 a7804e7c54349678d1f355b33eca1525 302 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 28-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL549_RS04845 a7804e7c54349678d1f355b33eca1525 302 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 296 3.2E-125 T 28-03-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 AL549_RS04845 a7804e7c54349678d1f355b33eca1525 302 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 166 3.2E-55 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AL549_RS04845 a7804e7c54349678d1f355b33eca1525 302 SUPERFAMILY SSF48179 168 298 5.78E-38 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL549_RS04715 d82650527015caf360bed96bbe5ac277 457 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 298 452 6.9E-33 T 28-03-2018 IPR000160 GGDEF domain AL549_RS04715 d82650527015caf360bed96bbe5ac277 457 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 234 7.6E-27 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS04715 d82650527015caf360bed96bbe5ac277 457 Pfam PF00990 Diguanylate cyclase, GGDEF domain 301 449 1.3E-33 T 28-03-2018 IPR000160 GGDEF domain AL549_RS04715 d82650527015caf360bed96bbe5ac277 457 Gene3D G3DSA:3.40.190.10 19 146 2.9E-20 T 28-03-2018 AL549_RS04715 d82650527015caf360bed96bbe5ac277 457 SMART SM00267 289 453 9.0E-44 T 28-03-2018 IPR000160 GGDEF domain AL549_RS04715 d82650527015caf360bed96bbe5ac277 457 Gene3D G3DSA:3.40.190.10 147 213 2.2E-4 T 28-03-2018 AL549_RS04715 d82650527015caf360bed96bbe5ac277 457 Gene3D G3DSA:3.30.70.270 293 455 1.2E-39 T 28-03-2018 AL549_RS04715 d82650527015caf360bed96bbe5ac277 457 SUPERFAMILY SSF53850 2 236 7.85E-36 T 28-03-2018 AL549_RS04715 d82650527015caf360bed96bbe5ac277 457 SUPERFAMILY SSF55073 305 452 9.42E-37 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS04715 d82650527015caf360bed96bbe5ac277 457 SMART SM00062 31 248 3.6E-10 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS03975 27bb63b5756398b95c057dc984454461 220 Pfam PF04337 Protein of unknown function, DUF480 5 158 1.1E-65 T 28-03-2018 IPR007432 Protein of unknown function DUF480 AL549_RS03975 27bb63b5756398b95c057dc984454461 220 Gene3D G3DSA:1.20.5.170 194 219 0.0021 T 28-03-2018 AL549_RS03975 27bb63b5756398b95c057dc984454461 220 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 214 35.182 T 28-03-2018 IPR007432 Protein of unknown function DUF480 AL549_RS03975 27bb63b5756398b95c057dc984454461 220 Gene3D G3DSA:1.10.10.10 97 171 8.9E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03975 27bb63b5756398b95c057dc984454461 220 Gene3D G3DSA:1.10.10.10 2 87 1.4E-38 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03975 27bb63b5756398b95c057dc984454461 220 SUPERFAMILY SSF46785 90 174 4.62E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03975 27bb63b5756398b95c057dc984454461 220 SUPERFAMILY SSF46785 3 84 8.5E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01155 7e11fc6831eb7bebbaf2874236e20443 259 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 129 252 1.9E-20 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AL549_RS01155 7e11fc6831eb7bebbaf2874236e20443 259 SUPERFAMILY SSF55594 9 89 2.22E-12 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS01155 7e11fc6831eb7bebbaf2874236e20443 259 Gene3D G3DSA:3.30.1340.10 2 91 9.8E-7 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS01155 7e11fc6831eb7bebbaf2874236e20443 259 SUPERFAMILY SSF55804 129 250 1.24E-17 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS01155 7e11fc6831eb7bebbaf2874236e20443 259 Pfam PF00381 PTS HPr component phosphorylation site 12 85 2.1E-4 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS01155 7e11fc6831eb7bebbaf2874236e20443 259 Gene3D G3DSA:3.40.930.10 122 253 3.5E-15 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS01155 7e11fc6831eb7bebbaf2874236e20443 259 PIRSF PIRSF029195 1 259 1.8E-177 T 28-03-2018 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 AL549_RS02320 fa670757cf375106cae57e4320fe8af1 682 Gene3D G3DSA:2.60.220.10 566 663 1.8E-10 T 28-03-2018 AL549_RS02320 fa670757cf375106cae57e4320fe8af1 682 SUPERFAMILY SSF48230 8 339 1.54E-82 T 28-03-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 AL549_RS02320 fa670757cf375106cae57e4320fe8af1 682 SUPERFAMILY SSF49863 571 671 1.22E-12 T 28-03-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 AL549_RS02320 fa670757cf375106cae57e4320fe8af1 682 Gene3D G3DSA:2.70.98.10 313 565 1.7E-71 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL549_RS02320 fa670757cf375106cae57e4320fe8af1 682 Gene3D G3DSA:1.50.10.100 10 309 1.5E-53 T 28-03-2018 AL549_RS02320 fa670757cf375106cae57e4320fe8af1 682 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 33 290 4.0E-30 T 28-03-2018 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical AL549_RS02320 fa670757cf375106cae57e4320fe8af1 682 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 317 556 2.6E-65 T 28-03-2018 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 AL549_RS02320 fa670757cf375106cae57e4320fe8af1 682 SUPERFAMILY SSF74650 313 568 9.42E-75 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AL549_RS09890 e264f2832744d3b9caceddcfd34a7c5d 194 Gene3D G3DSA:1.10.3210.10 1 194 8.4E-51 T 28-03-2018 AL549_RS09890 e264f2832744d3b9caceddcfd34a7c5d 194 Pfam PF13023 HD domain 11 158 7.9E-18 T 28-03-2018 IPR006674 HD domain AL549_RS09890 e264f2832744d3b9caceddcfd34a7c5d 194 SUPERFAMILY SSF109604 4 193 5.65E-43 T 28-03-2018 AL549_RS09890 e264f2832744d3b9caceddcfd34a7c5d 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 47.094 T 28-03-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 AL549_RS09890 e264f2832744d3b9caceddcfd34a7c5d 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 176 6.0E-41 T 28-03-2018 AL549_RS09890 e264f2832744d3b9caceddcfd34a7c5d 194 SMART SM00471 26 151 2.9E-8 T 28-03-2018 IPR003607 HD/PDEase domain AL549_RS16440 cc1624df6a854e4d78b57c4632397526 355 SUPERFAMILY SSF74653 265 355 2.16E-15 T 28-03-2018 AL549_RS16440 cc1624df6a854e4d78b57c4632397526 355 TIGRFAM TIGR02794 tolA_full: protein TolA 14 354 4.7E-92 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AL549_RS16440 cc1624df6a854e4d78b57c4632397526 355 Pfam PF06519 TolA C-terminal 254 352 7.7E-29 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AL549_RS16440 cc1624df6a854e4d78b57c4632397526 355 Gene3D G3DSA:3.30.1150.10 274 349 3.9E-13 T 28-03-2018 AL549_RS04640 d3384f9935f1fdded4c565bc8d21695f 409 Hamap MF_00550 Peptidase T [pepT]. 1 404 56.446 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AL549_RS04640 d3384f9935f1fdded4c565bc8d21695f 409 Pfam PF07687 Peptidase dimerisation domain 206 281 1.7E-8 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL549_RS04640 d3384f9935f1fdded4c565bc8d21695f 409 SUPERFAMILY SSF53187 322 406 1.39E-79 T 28-03-2018 AL549_RS04640 d3384f9935f1fdded4c565bc8d21695f 409 SUPERFAMILY SSF53187 1 210 1.39E-79 T 28-03-2018 AL549_RS04640 d3384f9935f1fdded4c565bc8d21695f 409 PIRSF PIRSF037215 1 408 8.3E-182 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AL549_RS04640 d3384f9935f1fdded4c565bc8d21695f 409 Gene3D G3DSA:3.40.630.10 1 409 2.8E-49 T 28-03-2018 AL549_RS04640 d3384f9935f1fdded4c565bc8d21695f 409 SUPERFAMILY SSF55031 209 320 1.99E-38 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL549_RS04640 d3384f9935f1fdded4c565bc8d21695f 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL549_RS04640 d3384f9935f1fdded4c565bc8d21695f 409 Pfam PF01546 Peptidase family M20/M25/M40 139 401 4.6E-13 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL549_RS04640 d3384f9935f1fdded4c565bc8d21695f 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 406 4.6E-155 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AL549_RS04640 d3384f9935f1fdded4c565bc8d21695f 409 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL549_RS11490 7db5873e8bfca15409170c0a008b16ad 223 SUPERFAMILY SSF52540 1 218 1.1E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11490 7db5873e8bfca15409170c0a008b16ad 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS11490 7db5873e8bfca15409170c0a008b16ad 223 SMART SM00382 30 218 4.2E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS11490 7db5873e8bfca15409170c0a008b16ad 223 Gene3D G3DSA:3.40.50.300 1 221 5.1E-54 T 28-03-2018 AL549_RS11490 7db5873e8bfca15409170c0a008b16ad 223 Pfam PF00005 ABC transporter 21 167 1.9E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS04660 b8c29e892ad855bd79dcd8f5b7733f1e 593 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 375 556 3.9E-40 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS04660 b8c29e892ad855bd79dcd8f5b7733f1e 593 SMART SM00283 328 589 1.1E-58 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS04660 b8c29e892ad855bd79dcd8f5b7733f1e 593 SMART SM01358 28 279 5.0E-6 T 28-03-2018 IPR032255 Helical bimodular sensor domain AL549_RS04660 b8c29e892ad855bd79dcd8f5b7733f1e 593 Gene3D G3DSA:1.20.58.60 68 332 0.004 T 28-03-2018 AL549_RS04660 b8c29e892ad855bd79dcd8f5b7733f1e 593 Gene3D G3DSA:1.10.287.950 342 561 1.1E-50 T 28-03-2018 AL549_RS04660 b8c29e892ad855bd79dcd8f5b7733f1e 593 SUPERFAMILY SSF58104 283 590 2.09E-68 T 28-03-2018 AL549_RS06775 d3efd5cd2abe9041c693be5b6ac656e2 559 SUPERFAMILY SSF53383 95 495 1.04E-71 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS06775 d3efd5cd2abe9041c693be5b6ac656e2 559 SUPERFAMILY SSF53383 528 555 1.04E-71 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS06775 d3efd5cd2abe9041c693be5b6ac656e2 559 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 99 462 1.1E-31 T 28-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AL549_RS06775 d3efd5cd2abe9041c693be5b6ac656e2 559 Gene3D G3DSA:3.40.640.10 113 414 1.3E-32 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS06775 d3efd5cd2abe9041c693be5b6ac656e2 559 Gene3D G3DSA:3.90.1150.10 415 559 2.1E-15 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS08255 923d80f3de09dae1110833f7466c22bc 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 3.0E-61 T 28-03-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 AL549_RS08255 923d80f3de09dae1110833f7466c22bc 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.2E-10 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL549_RS08255 923d80f3de09dae1110833f7466c22bc 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.2E-10 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL549_RS08255 923d80f3de09dae1110833f7466c22bc 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.2E-10 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL549_RS08255 923d80f3de09dae1110833f7466c22bc 112 Gene3D G3DSA:3.10.20.30 5 112 3.0E-32 T 28-03-2018 IPR012675 Beta-grasp domain AL549_RS08255 923d80f3de09dae1110833f7466c22bc 112 SUPERFAMILY SSF54292 5 107 1.57E-32 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL549_RS08255 923d80f3de09dae1110833f7466c22bc 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 28-03-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL549_RS08255 923d80f3de09dae1110833f7466c22bc 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 1.2E-14 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL549_RS05620 4272b484c97e64ee58d15b007649cc55 368 Pfam PF00005 ABC transporter 18 158 5.6E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS05620 4272b484c97e64ee58d15b007649cc55 368 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 4 359 4.2E-136 T 28-03-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 AL549_RS05620 4272b484c97e64ee58d15b007649cc55 368 Gene3D G3DSA:3.40.50.300 1 250 1.3E-51 T 28-03-2018 AL549_RS05620 4272b484c97e64ee58d15b007649cc55 368 SUPERFAMILY SSF50331 237 359 9.14E-16 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL549_RS05620 4272b484c97e64ee58d15b007649cc55 368 Gene3D G3DSA:2.40.50.100 276 358 3.1E-19 T 28-03-2018 AL549_RS05620 4272b484c97e64ee58d15b007649cc55 368 Pfam PF03459 TOBE domain 293 359 1.0E-12 T 28-03-2018 IPR005116 Transport-associated OB, type 1 AL549_RS05620 4272b484c97e64ee58d15b007649cc55 368 SUPERFAMILY SSF52540 11 237 1.81E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS05620 4272b484c97e64ee58d15b007649cc55 368 SMART SM00382 25 208 6.4E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS05620 4272b484c97e64ee58d15b007649cc55 368 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS14635 bb12dbd8503ddc2c97ac8107a98ed70e 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 98 197 1.9E-16 T 28-03-2018 IPR023214 HAD-like domain AL549_RS14635 bb12dbd8503ddc2c97ac8107a98ed70e 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 88 199 1.3E-14 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS14635 bb12dbd8503ddc2c97ac8107a98ed70e 223 Gene3D G3DSA:3.40.50.1000 2 215 2.1E-22 T 28-03-2018 IPR023214 HAD-like domain AL549_RS14635 bb12dbd8503ddc2c97ac8107a98ed70e 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 162 182 9.3E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS14635 bb12dbd8503ddc2c97ac8107a98ed70e 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 189 202 9.3E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS14635 bb12dbd8503ddc2c97ac8107a98ed70e 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 9.3E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS14635 bb12dbd8503ddc2c97ac8107a98ed70e 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 160 9.3E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS14635 bb12dbd8503ddc2c97ac8107a98ed70e 223 SUPERFAMILY SSF56784 1 207 1.57E-30 T 28-03-2018 IPR023214 HAD-like domain AL549_RS14635 bb12dbd8503ddc2c97ac8107a98ed70e 223 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 194 2.3E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS20955 212ab150c3477692c596cc114ac218df 122 SUPERFAMILY SSF48300 4 58 1.83E-15 T 28-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20955 212ab150c3477692c596cc114ac218df 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 93 2.0E-12 T 28-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20955 212ab150c3477692c596cc114ac218df 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.725 T 28-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20955 212ab150c3477692c596cc114ac218df 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 4.3E-46 T 28-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20955 212ab150c3477692c596cc114ac218df 122 SUPERFAMILY SSF54736 51 122 1.62E-24 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL549_RS20955 212ab150c3477692c596cc114ac218df 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 5.4E-30 T 28-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20955 212ab150c3477692c596cc114ac218df 122 Gene3D G3DSA:3.30.1390.10 52 122 1.4E-29 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL549_RS20955 212ab150c3477692c596cc114ac218df 122 Gene3D G3DSA:1.20.5.710 2 51 3.8E-15 T 28-03-2018 AL549_RS20955 212ab150c3477692c596cc114ac218df 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 2.2E-16 T 28-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS01080 f6364b3cb1af59af55836d9d123276bc 715 Gene3D G3DSA:3.40.190.10 12 561 6.1E-4 T 28-03-2018 AL549_RS01080 f6364b3cb1af59af55836d9d123276bc 715 Pfam PF01752 Collagenase 306 590 7.0E-109 T 28-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL549_RS01080 f6364b3cb1af59af55836d9d123276bc 715 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 631 702 2.4E-8 T 28-03-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial AL549_RS01080 f6364b3cb1af59af55836d9d123276bc 715 Pfam PF08453 Peptidase family M9 N-terminal 61 245 2.6E-48 T 28-03-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain AL549_RS01080 f6364b3cb1af59af55836d9d123276bc 715 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 424 440 2.3E-22 T 28-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL549_RS01080 f6364b3cb1af59af55836d9d123276bc 715 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 466 484 2.3E-22 T 28-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL549_RS01080 f6364b3cb1af59af55836d9d123276bc 715 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 406 420 2.3E-22 T 28-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL549_RS01080 f6364b3cb1af59af55836d9d123276bc 715 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 490 505 2.3E-22 T 28-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL549_RS00610 c4f2a50d2d413ea224caa86fddf41472 170 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 32 169 8.1E-33 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL549_RS00610 c4f2a50d2d413ea224caa86fddf41472 170 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 158 169 - T 28-03-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL549_RS00610 c4f2a50d2d413ea224caa86fddf41472 170 Gene3D G3DSA:2.60.40.200 20 170 1.1E-37 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL549_RS00610 c4f2a50d2d413ea224caa86fddf41472 170 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 62 72 - T 28-03-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL549_RS00610 c4f2a50d2d413ea224caa86fddf41472 170 SUPERFAMILY SSF49329 28 170 6.02E-49 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL549_RS10905 1866b884614d0efdc1490b5f01d3ef72 459 SUPERFAMILY SSF46626 318 459 4.22E-25 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS10905 1866b884614d0efdc1490b5f01d3ef72 459 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 19 459 4.6E-145 T 28-03-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase AL549_RS10905 1866b884614d0efdc1490b5f01d3ef72 459 Gene3D G3DSA:1.10.760.10 306 459 1.4E-27 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS10905 1866b884614d0efdc1490b5f01d3ef72 459 PIRSF PIRSF028099 7 459 1.8E-184 T 28-03-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase AL549_RS10905 1866b884614d0efdc1490b5f01d3ef72 459 Gene3D G3DSA:1.10.760.10 55 305 0.0032 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS20710 f4e65b0978431a86bc740c098f333da6 96 SMART SM00883 2 95 8.8E-51 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL549_RS20710 f4e65b0978431a86bc740c098f333da6 96 SUPERFAMILY SSF50129 1 95 1.17E-31 T 28-03-2018 IPR011032 GroES-like AL549_RS20710 f4e65b0978431a86bc740c098f333da6 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 3.4E-31 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL549_RS20710 f4e65b0978431a86bc740c098f333da6 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.088 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL549_RS20710 f4e65b0978431a86bc740c098f333da6 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 28-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AL549_RS20710 f4e65b0978431a86bc740c098f333da6 96 Gene3D G3DSA:2.30.33.40 1 96 1.9E-33 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL549_RS20710 f4e65b0978431a86bc740c098f333da6 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.8E-27 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL549_RS20710 f4e65b0978431a86bc740c098f333da6 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.8E-27 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL549_RS20710 f4e65b0978431a86bc740c098f333da6 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.8E-27 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL549_RS20710 f4e65b0978431a86bc740c098f333da6 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.8E-27 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL549_RS11370 dd85c43ef1554e719042154f6f4e066c 347 Gene3D G3DSA:2.40.30.10 4 107 1.1E-20 T 28-03-2018 AL549_RS11370 dd85c43ef1554e719042154f6f4e066c 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 8.4E-5 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL549_RS11370 dd85c43ef1554e719042154f6f4e066c 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 53 8.4E-5 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL549_RS11370 dd85c43ef1554e719042154f6f4e066c 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 125 144 8.4E-5 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL549_RS11370 dd85c43ef1554e719042154f6f4e066c 347 Gene3D G3DSA:3.10.20.30 247 346 1.2E-21 T 28-03-2018 IPR012675 Beta-grasp domain AL549_RS11370 dd85c43ef1554e719042154f6f4e066c 347 Gene3D G3DSA:3.40.50.80 117 246 1.1E-23 T 28-03-2018 AL549_RS11370 dd85c43ef1554e719042154f6f4e066c 347 Pfam PF00970 Oxidoreductase FAD-binding domain 18 109 1.4E-14 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AL549_RS11370 dd85c43ef1554e719042154f6f4e066c 347 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 271 337 5.6E-12 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL549_RS11370 dd85c43ef1554e719042154f6f4e066c 347 SUPERFAMILY SSF54292 238 346 5.77E-25 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL549_RS11370 dd85c43ef1554e719042154f6f4e066c 347 SUPERFAMILY SSF52343 119 249 7.2E-32 T 28-03-2018 AL549_RS11370 dd85c43ef1554e719042154f6f4e066c 347 Pfam PF00175 Oxidoreductase NAD-binding domain 126 229 4.5E-11 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL549_RS11370 dd85c43ef1554e719042154f6f4e066c 347 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 296 304 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL549_RS11370 dd85c43ef1554e719042154f6f4e066c 347 SUPERFAMILY SSF63380 4 110 5.28E-26 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL549_RS18820 16b1971978157999ed0552d0ab03abc7 303 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 16 242 1.1E-40 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AL549_RS18820 16b1971978157999ed0552d0ab03abc7 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 175 185 9.7E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL549_RS18820 16b1971978157999ed0552d0ab03abc7 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 16 28 9.7E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL549_RS18820 16b1971978157999ed0552d0ab03abc7 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 30 41 9.7E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL549_RS18820 16b1971978157999ed0552d0ab03abc7 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 191 199 9.7E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL549_RS18820 16b1971978157999ed0552d0ab03abc7 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 58 9.7E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL549_RS18820 16b1971978157999ed0552d0ab03abc7 303 Gene3D G3DSA:3.40.50.620 8 144 3.5E-33 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS18820 16b1971978157999ed0552d0ab03abc7 303 Gene3D G3DSA:3.40.50.620 145 302 1.5E-20 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS18820 16b1971978157999ed0552d0ab03abc7 303 SUPERFAMILY SSF52374 13 290 2.25E-84 T 28-03-2018 AL549_RS18820 16b1971978157999ed0552d0ab03abc7 303 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 13 295 40.711 T 28-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 AL549_RS18820 16b1971978157999ed0552d0ab03abc7 303 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 13 276 2.8E-111 T 28-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 AL549_RS21300 e6af50dad20d22295295f6a7db08a532 829 SMART SM00052 591 829 2.2E-32 T 28-03-2018 IPR001633 EAL domain AL549_RS21300 e6af50dad20d22295295f6a7db08a532 829 Pfam PF00563 EAL domain 599 825 3.1E-57 T 28-03-2018 IPR001633 EAL domain AL549_RS21300 e6af50dad20d22295295f6a7db08a532 829 Pfam PF08495 FIST N domain 30 214 6.1E-20 T 28-03-2018 IPR013702 FIST domain, N-terminal AL549_RS21300 e6af50dad20d22295295f6a7db08a532 829 SUPERFAMILY SSF55073 420 562 6.75E-8 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS21300 e6af50dad20d22295295f6a7db08a532 829 SUPERFAMILY SSF141868 599 825 1.7E-58 T 28-03-2018 IPR001633 EAL domain AL549_RS21300 e6af50dad20d22295295f6a7db08a532 829 Gene3D G3DSA:3.20.20.450 590 828 1.5E-59 T 28-03-2018 IPR001633 EAL domain AL549_RS21300 e6af50dad20d22295295f6a7db08a532 829 Pfam PF00990 Diguanylate cyclase, GGDEF domain 416 476 9.4E-7 T 28-03-2018 IPR000160 GGDEF domain AL549_RS21300 e6af50dad20d22295295f6a7db08a532 829 SMART SM01204 216 342 2.9E-17 T 28-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL549_RS21300 e6af50dad20d22295295f6a7db08a532 829 SMART SM00897 27 215 5.6E-30 T 28-03-2018 IPR013702 FIST domain, N-terminal AL549_RS21300 e6af50dad20d22295295f6a7db08a532 829 Gene3D G3DSA:3.30.70.270 408 589 2.5E-14 T 28-03-2018 AL549_RS21300 e6af50dad20d22295295f6a7db08a532 829 Pfam PF10442 FIST C domain 216 341 5.3E-12 T 28-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL549_RS21300 e6af50dad20d22295295f6a7db08a532 829 SMART SM00267 403 578 4.2E-4 T 28-03-2018 IPR000160 GGDEF domain AL549_RS23785 742d39277c67b1d42cdaf740518f23b0 718 SMART SM00382 42 195 2.7E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS23785 742d39277c67b1d42cdaf740518f23b0 718 SUPERFAMILY SSF47090 456 530 1.6E-12 T 28-03-2018 IPR002477 Peptidoglycan binding-like AL549_RS23785 742d39277c67b1d42cdaf740518f23b0 718 Gene3D G3DSA:3.90.70.10 344 463 1.8E-17 T 28-03-2018 AL549_RS23785 742d39277c67b1d42cdaf740518f23b0 718 SUPERFAMILY SSF52540 5 264 3.67E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS23785 742d39277c67b1d42cdaf740518f23b0 718 Pfam PF13401 AAA domain 42 171 1.2E-23 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS23785 742d39277c67b1d42cdaf740518f23b0 718 Gene3D G3DSA:3.40.50.300 18 203 1.1E-11 T 28-03-2018 AL549_RS23785 742d39277c67b1d42cdaf740518f23b0 718 Gene3D G3DSA:1.10.101.10 464 530 5.8E-12 T 28-03-2018 IPR002477 Peptidoglycan binding-like AL549_RS23785 742d39277c67b1d42cdaf740518f23b0 718 Pfam PF16537 Type II secretion system protein B 653 712 7.3E-24 T 28-03-2018 IPR032389 Type II secretion system protein B AL549_RS23785 742d39277c67b1d42cdaf740518f23b0 718 Pfam PF01471 Putative peptidoglycan binding domain 470 525 1.5E-6 T 28-03-2018 IPR002477 Peptidoglycan binding-like AL549_RS18400 1a3ec86acc10dde46d14a1a7542ffbba 307 SUPERFAMILY SSF56784 35 239 8.83E-14 T 28-03-2018 IPR023214 HAD-like domain AL549_RS18400 1a3ec86acc10dde46d14a1a7542ffbba 307 Pfam PF12710 haloacid dehalogenase-like hydrolase 40 232 1.5E-12 T 28-03-2018 AL549_RS18400 1a3ec86acc10dde46d14a1a7542ffbba 307 Gene3D G3DSA:3.40.50.1000 19 239 3.6E-10 T 28-03-2018 IPR023214 HAD-like domain AL549_RS18145 ea7d4563ecf64ac688165751dda09446 325 Pfam PF03595 Voltage-dependent anion channel 19 306 1.5E-30 T 28-03-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 AL549_RS21525 a1898dc3948a2eb7c867d15d56357463 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 271 4.0E-8 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS21525 a1898dc3948a2eb7c867d15d56357463 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 565 0.0013 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS21525 a1898dc3948a2eb7c867d15d56357463 571 SMART SM00382 32 231 8.6E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS21525 a1898dc3948a2eb7c867d15d56357463 571 SMART SM00382 338 534 5.5E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS21525 a1898dc3948a2eb7c867d15d56357463 571 SUPERFAMILY SSF52540 304 553 2.24E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS21525 a1898dc3948a2eb7c867d15d56357463 571 Gene3D G3DSA:3.40.50.300 1 285 7.8E-71 T 28-03-2018 AL549_RS21525 a1898dc3948a2eb7c867d15d56357463 571 Gene3D G3DSA:3.40.50.300 299 570 1.5E-72 T 28-03-2018 AL549_RS21525 a1898dc3948a2eb7c867d15d56357463 571 Pfam PF00005 ABC transporter 24 181 9.6E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS21525 a1898dc3948a2eb7c867d15d56357463 571 Pfam PF00005 ABC transporter 330 483 1.6E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS21525 a1898dc3948a2eb7c867d15d56357463 571 SUPERFAMILY SSF52540 3 253 3.74E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS21525 a1898dc3948a2eb7c867d15d56357463 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS21525 a1898dc3948a2eb7c867d15d56357463 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS04650 7b35732502bef060250ffac66fcd93cb 375 Gene3D G3DSA:2.40.50.100 163 343 2.7E-6 T 28-03-2018 AL549_RS04650 7b35732502bef060250ffac66fcd93cb 375 Gene3D G3DSA:1.10.287.470 115 159 7.4E-16 T 28-03-2018 AL549_RS04650 7b35732502bef060250ffac66fcd93cb 375 SUPERFAMILY SSF111369 50 291 1.06E-63 T 28-03-2018 AL549_RS04650 7b35732502bef060250ffac66fcd93cb 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 368 8.6E-81 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL549_RS04650 7b35732502bef060250ffac66fcd93cb 375 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 53 283 9.2E-14 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL549_RS04650 7b35732502bef060250ffac66fcd93cb 375 Gene3D G3DSA:2.40.50.100 58 114 1.4E-18 T 28-03-2018 AL549_RS20820 89c57f9998138448ffc0f42cb0a0468a 608 SUPERFAMILY SSF51206 8 128 4.06E-16 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AL549_RS20820 89c57f9998138448ffc0f42cb0a0468a 608 SUPERFAMILY SSF54631 144 276 2.1E-17 T 28-03-2018 AL549_RS20820 89c57f9998138448ffc0f42cb0a0468a 608 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 2.6E-9 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL549_RS20820 89c57f9998138448ffc0f42cb0a0468a 608 Gene3D G3DSA:2.60.120.10 3 134 9.6E-14 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS20820 89c57f9998138448ffc0f42cb0a0468a 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 432 8.9E-42 T 28-03-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AL549_RS20820 89c57f9998138448ffc0f42cb0a0468a 608 Gene3D G3DSA:3.10.580.10 135 315 1.1E-16 T 28-03-2018 AL549_RS20820 89c57f9998138448ffc0f42cb0a0468a 608 SMART SM00100 11 128 7.4E-4 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL549_RS20820 89c57f9998138448ffc0f42cb0a0468a 608 Gene3D G3DSA:1.20.120.330 494 599 6.9E-4 T 28-03-2018 AL549_RS20820 89c57f9998138448ffc0f42cb0a0468a 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 471 604 4.0E-38 T 28-03-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AL549_RS04950 b102d00811e227be91ba99e6b931034f 513 Gene3D G3DSA:1.10.3210.10 285 510 1.1E-44 T 28-03-2018 AL549_RS04950 b102d00811e227be91ba99e6b931034f 513 Pfam PF00072 Response regulator receiver domain 28 136 5.3E-6 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS04950 b102d00811e227be91ba99e6b931034f 513 SUPERFAMILY SSF52172 24 158 2.42E-12 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS04950 b102d00811e227be91ba99e6b931034f 513 Gene3D G3DSA:3.40.50.2300 7 163 4.8E-15 T 28-03-2018 AL549_RS04950 b102d00811e227be91ba99e6b931034f 513 SMART SM00471 334 471 4.9E-4 T 28-03-2018 IPR003607 HD/PDEase domain AL549_RS04950 b102d00811e227be91ba99e6b931034f 513 Pfam PF11849 Domain of unknown function (DUF3369) 148 313 1.5E-44 T 28-03-2018 IPR021800 Domain of unknown function DUF3369 AL549_RS04950 b102d00811e227be91ba99e6b931034f 513 SMART SM00448 26 148 0.0056 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS04950 b102d00811e227be91ba99e6b931034f 513 Pfam PF13487 HD domain 389 452 1.1E-18 T 28-03-2018 AL549_RS04950 b102d00811e227be91ba99e6b931034f 513 SUPERFAMILY SSF109604 324 500 8.17E-39 T 28-03-2018 AL549_RS04950 b102d00811e227be91ba99e6b931034f 513 Gene3D G3DSA:3.30.450.40 164 284 0.092 T 28-03-2018 IPR029016 GAF domain-like AL549_RS11755 2c9a6eb1ab859f70cb7428f34d7d0580 76 Gene3D G3DSA:3.40.30.10 2 73 1.3E-14 T 28-03-2018 AL549_RS11755 2c9a6eb1ab859f70cb7428f34d7d0580 76 Pfam PF00462 Glutaredoxin 4 60 1.8E-12 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL549_RS11755 2c9a6eb1ab859f70cb7428f34d7d0580 76 SUPERFAMILY SSF52833 3 72 4.28E-14 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS11755 2c9a6eb1ab859f70cb7428f34d7d0580 76 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 28-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AL549_RS04100 82bb75a0c3b662800f2428bda8af0228 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 15 419 1.4E-141 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL549_RS04100 82bb75a0c3b662800f2428bda8af0228 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 414 1.1E-118 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL549_RS04100 82bb75a0c3b662800f2428bda8af0228 427 PIRSF PIRSF006066 1 425 1.2E-140 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL549_RS02575 bd600fbaed1852890786efcfdebfc9f4 170 Pfam PF01641 SelR domain 47 163 1.0E-45 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL549_RS02575 bd600fbaed1852890786efcfdebfc9f4 170 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 43 168 9.3E-49 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL549_RS02575 bd600fbaed1852890786efcfdebfc9f4 170 Gene3D G3DSA:2.170.150.20 33 170 3.1E-50 T 28-03-2018 AL549_RS02575 bd600fbaed1852890786efcfdebfc9f4 170 SUPERFAMILY SSF51316 42 167 1.99E-51 T 28-03-2018 IPR011057 Mss4-like AL549_RS05910 699065c640940d8f04f264c4a4bcad50 543 SUPERFAMILY SSF52540 1 188 5.19E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS05910 699065c640940d8f04f264c4a4bcad50 543 SUPERFAMILY SSF52540 216 322 5.19E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS05910 699065c640940d8f04f264c4a4bcad50 543 Pfam PF11398 Protein of unknown function (DUF2813) 1 369 3.5E-153 T 28-03-2018 IPR022602 Protein of unknown function DUF2813 AL549_RS05910 699065c640940d8f04f264c4a4bcad50 543 Gene3D G3DSA:3.40.1360.10 361 485 8.9E-4 T 28-03-2018 AL549_RS05910 699065c640940d8f04f264c4a4bcad50 543 Gene3D G3DSA:3.40.50.300 1 349 3.0E-17 T 28-03-2018 AL549_RS22515 0c1c388a1b1cf9c7b3f101f4cd118dbf 346 PIRSF PIRSF002786 10 338 1.8E-65 T 28-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AL549_RS22515 0c1c388a1b1cf9c7b3f101f4cd118dbf 346 Gene3D G3DSA:1.10.40.60 227 292 6.0E-24 T 28-03-2018 AL549_RS22515 0c1c388a1b1cf9c7b3f101f4cd118dbf 346 SUPERFAMILY SSF158544 111 223 1.1E-29 T 28-03-2018 AL549_RS22515 0c1c388a1b1cf9c7b3f101f4cd118dbf 346 Gene3D G3DSA:1.10.40.60 109 225 3.0E-27 T 28-03-2018 AL549_RS22515 0c1c388a1b1cf9c7b3f101f4cd118dbf 346 Pfam PF03934 Type II secretion system (T2SS), protein K 40 327 2.0E-87 T 28-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AL549_RS22515 0c1c388a1b1cf9c7b3f101f4cd118dbf 346 SUPERFAMILY SSF54523 46 110 8.63E-36 T 28-03-2018 AL549_RS22515 0c1c388a1b1cf9c7b3f101f4cd118dbf 346 SUPERFAMILY SSF54523 295 335 8.63E-36 T 28-03-2018 AL549_RS22515 0c1c388a1b1cf9c7b3f101f4cd118dbf 346 SUPERFAMILY SSF158544 225 293 5.23E-20 T 28-03-2018 AL549_RS23755 f26634972a64046cd09860993819e3a5 272 SUPERFAMILY SSF53474 1 267 2.45E-57 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS23755 f26634972a64046cd09860993819e3a5 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 4.9E-8 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS23755 f26634972a64046cd09860993819e3a5 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 4.9E-8 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS23755 f26634972a64046cd09860993819e3a5 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 4.9E-8 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS23755 f26634972a64046cd09860993819e3a5 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 4.9E-8 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS23755 f26634972a64046cd09860993819e3a5 272 Pfam PF00561 alpha/beta hydrolase fold 23 123 6.3E-14 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS23755 f26634972a64046cd09860993819e3a5 272 Gene3D G3DSA:3.40.50.1820 2 267 8.9E-41 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS19070 394ae3020a326e0407ef3eb5403fc0e5 860 Pfam PF02272 DHHA1 domain 722 856 8.5E-30 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AL549_RS19070 394ae3020a326e0407ef3eb5403fc0e5 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL549_RS19070 394ae3020a326e0407ef3eb5403fc0e5 860 SMART SM00863 652 695 1.1E-21 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AL549_RS19070 394ae3020a326e0407ef3eb5403fc0e5 860 SUPERFAMILY SSF55681 3 254 2.73E-108 T 28-03-2018 AL549_RS19070 394ae3020a326e0407ef3eb5403fc0e5 860 SUPERFAMILY SSF101353 255 462 1.1E-59 T 28-03-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AL549_RS19070 394ae3020a326e0407ef3eb5403fc0e5 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 1.2E-227 T 28-03-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AL549_RS19070 394ae3020a326e0407ef3eb5403fc0e5 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 199.164 T 28-03-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AL549_RS19070 394ae3020a326e0407ef3eb5403fc0e5 860 Gene3D G3DSA:3.30.980.10 552 697 2.5E-47 T 28-03-2018 AL549_RS19070 394ae3020a326e0407ef3eb5403fc0e5 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 3.1E-18 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AL549_RS19070 394ae3020a326e0407ef3eb5403fc0e5 860 Gene3D G3DSA:1.20.120.330 698 813 2.5E-4 T 28-03-2018 AL549_RS19070 394ae3020a326e0407ef3eb5403fc0e5 860 Gene3D G3DSA:3.30.930.10 2 251 4.6E-118 T 28-03-2018 AL549_RS19070 394ae3020a326e0407ef3eb5403fc0e5 860 SUPERFAMILY SSF55186 551 709 1.96E-52 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AL549_RS19070 394ae3020a326e0407ef3eb5403fc0e5 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.0E-31 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL549_RS19070 394ae3020a326e0407ef3eb5403fc0e5 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 1.0E-31 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL549_RS19070 394ae3020a326e0407ef3eb5403fc0e5 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 1.0E-31 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL549_RS19070 394ae3020a326e0407ef3eb5403fc0e5 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 1.0E-31 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL549_RS19070 394ae3020a326e0407ef3eb5403fc0e5 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 1.0E-31 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL549_RS19070 394ae3020a326e0407ef3eb5403fc0e5 860 SUPERFAMILY SSF50447 454 551 2.22E-18 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL549_RS19730 16622ad2b90da4da900844f39f25e14a 459 SUPERFAMILY SSF52540 248 438 9.81E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS19730 16622ad2b90da4da900844f39f25e14a 459 SUPERFAMILY SSF52540 159 210 9.81E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS19730 16622ad2b90da4da900844f39f25e14a 459 Pfam PF02562 PhoH-like protein 249 453 3.9E-54 T 28-03-2018 IPR003714 PhoH-like protein GO:0005524 AL549_RS19730 16622ad2b90da4da900844f39f25e14a 459 SUPERFAMILY SSF88723 7 68 2.75E-14 T 28-03-2018 IPR029060 PIN domain-like AL549_RS19730 16622ad2b90da4da900844f39f25e14a 459 SUPERFAMILY SSF88723 104 161 2.75E-14 T 28-03-2018 IPR029060 PIN domain-like AL549_RS19730 16622ad2b90da4da900844f39f25e14a 459 Gene3D G3DSA:3.40.50.1010 6 251 8.3E-33 T 28-03-2018 IPR029060 PIN domain-like AL549_RS19730 16622ad2b90da4da900844f39f25e14a 459 SMART SM00670 7 141 1.2E-10 T 28-03-2018 IPR002716 PIN domain AL549_RS19730 16622ad2b90da4da900844f39f25e14a 459 Pfam PF13638 PIN domain 9 150 3.0E-35 T 28-03-2018 IPR002716 PIN domain AL549_RS19730 16622ad2b90da4da900844f39f25e14a 459 Gene3D G3DSA:3.40.50.300 252 454 2.0E-21 T 28-03-2018 AL549_RS15375 8bfd4ca881357f3f923aff195fa39fa9 565 SUPERFAMILY SSF111326 11 557 4.32E-258 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL549_RS15375 8bfd4ca881357f3f923aff195fa39fa9 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 5.5E-291 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL549_RS15375 8bfd4ca881357f3f923aff195fa39fa9 565 Gene3D G3DSA:3.40.1770.10 15 158 5.1E-29 T 28-03-2018 AL549_RS15375 8bfd4ca881357f3f923aff195fa39fa9 565 Gene3D G3DSA:3.40.1770.10 201 557 8.6E-161 T 28-03-2018 AL549_RS15375 8bfd4ca881357f3f923aff195fa39fa9 565 Pfam PF17391 Urocanase N-terminal domain 17 143 2.1E-62 T 28-03-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL549_RS15375 8bfd4ca881357f3f923aff195fa39fa9 565 Pfam PF01175 Urocanase Rossmann-like domain 146 351 3.7E-84 T 28-03-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL549_RS15375 8bfd4ca881357f3f923aff195fa39fa9 565 Pfam PF17392 Urocanase C-terminal domain 354 547 1.4E-91 T 28-03-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL549_RS15375 8bfd4ca881357f3f923aff195fa39fa9 565 Hamap MF_00577 Urocanate hydratase [hutU]. 2 558 49.241 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL549_RS15375 8bfd4ca881357f3f923aff195fa39fa9 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 28-03-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL549_RS15375 8bfd4ca881357f3f923aff195fa39fa9 565 PIRSF PIRSF001423 1 563 1.6E-294 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL549_RS03455 8e532b1a204f5742d44af26b77a66da7 437 Gene3D G3DSA:3.10.580.10 193 344 1.2E-18 T 28-03-2018 AL549_RS03455 8e532b1a204f5742d44af26b77a66da7 437 SMART SM01091 348 428 3.1E-26 T 28-03-2018 IPR005170 Transporter-associated domain AL549_RS03455 8e532b1a204f5742d44af26b77a66da7 437 SUPERFAMILY SSF56176 346 434 2.73E-22 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL549_RS03455 8e532b1a204f5742d44af26b77a66da7 437 Pfam PF01595 Domain of unknown function DUF21 9 199 2.3E-41 T 28-03-2018 IPR002550 Domain of unknown function DUF21 AL549_RS03455 8e532b1a204f5742d44af26b77a66da7 437 SUPERFAMILY SSF54631 201 336 1.07E-17 T 28-03-2018 AL549_RS03455 8e532b1a204f5742d44af26b77a66da7 437 Gene3D G3DSA:3.30.465.10 345 437 5.9E-22 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL549_RS03455 8e532b1a204f5742d44af26b77a66da7 437 Pfam PF03471 Transporter associated domain 349 427 2.1E-20 T 28-03-2018 IPR005170 Transporter-associated domain AL549_RS06115 15605dd23762f12b0fa5dd8cb98c4e27 377 PIRSF PIRSF006487 1 377 1.3E-80 T 28-03-2018 AL549_RS06115 15605dd23762f12b0fa5dd8cb98c4e27 377 Gene3D G3DSA:4.10.1250.10 238 286 1.6E-20 T 28-03-2018 AL549_RS06115 15605dd23762f12b0fa5dd8cb98c4e27 377 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 273 367 4.2E-21 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AL549_RS06115 15605dd23762f12b0fa5dd8cb98c4e27 377 SUPERFAMILY SSF101790 284 376 1.96E-25 T 28-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AL549_RS06115 15605dd23762f12b0fa5dd8cb98c4e27 377 Gene3D G3DSA:3.30.1360.120 140 237 3.5E-26 T 28-03-2018 AL549_RS06115 15605dd23762f12b0fa5dd8cb98c4e27 377 Gene3D G3DSA:3.30.1360.120 9 139 4.3E-33 T 28-03-2018 AL549_RS06115 15605dd23762f12b0fa5dd8cb98c4e27 377 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 11 371 4.4E-108 T 28-03-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AL549_RS06115 15605dd23762f12b0fa5dd8cb98c4e27 377 Pfam PF01571 Aminomethyltransferase folate-binding domain 15 259 4.0E-88 T 28-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal AL549_RS06115 15605dd23762f12b0fa5dd8cb98c4e27 377 Gene3D G3DSA:2.40.30.110 290 377 1.1E-23 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AL549_RS06115 15605dd23762f12b0fa5dd8cb98c4e27 377 SUPERFAMILY SSF103025 11 286 4.24E-91 T 28-03-2018 AL549_RS22480 775be328778fb728978587b2bed2cbab 672 Pfam PF00263 Bacterial type II and III secretion system protein 448 610 6.9E-51 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 AL549_RS22480 775be328778fb728978587b2bed2cbab 672 Pfam PF03958 Bacterial type II/III secretion system short domain 125 186 8.4E-9 T 28-03-2018 IPR005644 NolW-like AL549_RS22480 775be328778fb728978587b2bed2cbab 672 Pfam PF03958 Bacterial type II/III secretion system short domain 191 258 3.6E-14 T 28-03-2018 IPR005644 NolW-like AL549_RS22480 775be328778fb728978587b2bed2cbab 672 Pfam PF03958 Bacterial type II/III secretion system short domain 266 343 1.1E-16 T 28-03-2018 IPR005644 NolW-like AL549_RS22480 775be328778fb728978587b2bed2cbab 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 444 468 5.7E-37 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS22480 775be328778fb728978587b2bed2cbab 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 479 489 5.7E-37 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS22480 775be328778fb728978587b2bed2cbab 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 343 353 5.7E-37 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS22480 775be328778fb728978587b2bed2cbab 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 597 611 5.7E-37 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS22480 775be328778fb728978587b2bed2cbab 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 574 592 5.7E-37 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS22480 775be328778fb728978587b2bed2cbab 672 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 555 588 - T 28-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AL549_RS22480 775be328778fb728978587b2bed2cbab 672 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 619 2.4E-157 T 28-03-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 AL549_RS22480 775be328778fb728978587b2bed2cbab 672 PRINTS PR01032 Gene IV protein signature 590 612 1.8E-11 T 28-03-2018 AL549_RS22480 775be328778fb728978587b2bed2cbab 672 PRINTS PR01032 Gene IV protein signature 469 492 1.8E-11 T 28-03-2018 AL549_RS22480 775be328778fb728978587b2bed2cbab 672 PRINTS PR01032 Gene IV protein signature 537 565 1.8E-11 T 28-03-2018 AL549_RS06130 0023990453c09341fbc8f3bf820af867 126 Pfam PF01597 Glycine cleavage H-protein 5 125 4.4E-50 T 28-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate AL549_RS06130 0023990453c09341fbc8f3bf820af867 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 41.518 T 28-03-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AL549_RS06130 0023990453c09341fbc8f3bf820af867 126 Gene3D G3DSA:2.40.50.100 3 126 1.1E-47 T 28-03-2018 AL549_RS06130 0023990453c09341fbc8f3bf820af867 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 126 1.7E-51 T 28-03-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AL549_RS06130 0023990453c09341fbc8f3bf820af867 126 SUPERFAMILY SSF51230 3 125 9.16E-45 T 28-03-2018 IPR011053 Single hybrid motif AL549_RS07445 b6f736e2b46edfae7540d6397f46b3a5 130 SUPERFAMILY SSF54211 5 130 7.97E-48 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS07445 b6f736e2b46edfae7540d6397f46b3a5 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.501 T 28-03-2018 IPR023035 Ribosomal protein S9, bacterial/plastid AL549_RS07445 b6f736e2b46edfae7540d6397f46b3a5 130 Gene3D G3DSA:3.30.230.10 3 130 2.7E-51 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL549_RS07445 b6f736e2b46edfae7540d6397f46b3a5 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 4.3E-45 T 28-03-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AL549_RS07445 b6f736e2b46edfae7540d6397f46b3a5 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 28-03-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AL549_RS19270 12cfc0ed95762098a084a903e914a046 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 3.1E-10 T 28-03-2018 AL549_RS19270 12cfc0ed95762098a084a903e914a046 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 3.1E-10 T 28-03-2018 AL549_RS19270 12cfc0ed95762098a084a903e914a046 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.1E-10 T 28-03-2018 AL549_RS19270 12cfc0ed95762098a084a903e914a046 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 3.1E-10 T 28-03-2018 AL549_RS19270 12cfc0ed95762098a084a903e914a046 391 Gene3D G3DSA:3.50.50.60 2 351 1.4E-37 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS19270 12cfc0ed95762098a084a903e914a046 391 SUPERFAMILY SSF51905 3 177 3.77E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS19270 12cfc0ed95762098a084a903e914a046 391 SUPERFAMILY SSF51905 267 381 3.77E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS19270 12cfc0ed95762098a084a903e914a046 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 387 1.0E-122 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AL549_RS19270 12cfc0ed95762098a084a903e914a046 391 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 387 7.3E-147 T 28-03-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 AL549_RS19270 12cfc0ed95762098a084a903e914a046 391 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 28-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AL549_RS19270 12cfc0ed95762098a084a903e914a046 391 Pfam PF01494 FAD binding domain 4 335 1.5E-23 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL549_RS19300 582aa16b47be6f939fdf0a9ef59f3c7b 409 SUPERFAMILY SSF52283 7 136 9.99E-50 T 28-03-2018 AL549_RS19300 582aa16b47be6f939fdf0a9ef59f3c7b 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 3.6E-39 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AL549_RS19300 582aa16b47be6f939fdf0a9ef59f3c7b 409 SUPERFAMILY SSF55021 335 408 8.02E-18 T 28-03-2018 AL549_RS19300 582aa16b47be6f939fdf0a9ef59f3c7b 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL549_RS19300 582aa16b47be6f939fdf0a9ef59f3c7b 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 7.3E-53 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL549_RS19300 582aa16b47be6f939fdf0a9ef59f3c7b 409 SUPERFAMILY SSF51735 108 295 7.9E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS19300 582aa16b47be6f939fdf0a9ef59f3c7b 409 Gene3D G3DSA:3.40.50.720 138 295 3.7E-43 T 28-03-2018 AL549_RS19300 582aa16b47be6f939fdf0a9ef59f3c7b 409 Gene3D G3DSA:3.30.70.260 328 408 3.5E-16 T 28-03-2018 AL549_RS19300 582aa16b47be6f939fdf0a9ef59f3c7b 409 Gene3D G3DSA:3.40.50.720 1 137 3.6E-45 T 28-03-2018 AL549_RS19300 582aa16b47be6f939fdf0a9ef59f3c7b 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AL549_RS19300 582aa16b47be6f939fdf0a9ef59f3c7b 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL549_RS17850 af97db455486bdebe07b8b13758f88ab 873 SUPERFAMILY SSF81593 187 310 5.1E-9 T 28-03-2018 AL549_RS17850 af97db455486bdebe07b8b13758f88ab 873 Gene3D G3DSA:3.30.460.10 26 170 1.9E-24 T 28-03-2018 AL549_RS17850 af97db455486bdebe07b8b13758f88ab 873 Pfam PF01909 Nucleotidyltransferase domain 69 124 6.2E-7 T 28-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AL549_RS17850 af97db455486bdebe07b8b13758f88ab 873 Pfam PF01966 HD domain 452 584 7.1E-14 T 28-03-2018 IPR006674 HD domain AL549_RS17850 af97db455486bdebe07b8b13758f88ab 873 Gene3D G3DSA:3.30.70.260 681 772 1.0E-6 T 28-03-2018 AL549_RS17850 af97db455486bdebe07b8b13758f88ab 873 SUPERFAMILY SSF55021 796 854 4.16E-7 T 28-03-2018 AL549_RS17850 af97db455486bdebe07b8b13758f88ab 873 SMART SM00471 447 594 1.8E-10 T 28-03-2018 IPR003607 HD/PDEase domain AL549_RS17850 af97db455486bdebe07b8b13758f88ab 873 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 873 335.65 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AL549_RS17850 af97db455486bdebe07b8b13758f88ab 873 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 29 868 0.0 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AL549_RS17850 af97db455486bdebe07b8b13758f88ab 873 SUPERFAMILY SSF109604 416 593 5.34E-15 T 28-03-2018 AL549_RS17850 af97db455486bdebe07b8b13758f88ab 873 SUPERFAMILY SSF55021 689 762 8.33E-8 T 28-03-2018 AL549_RS17850 af97db455486bdebe07b8b13758f88ab 873 Gene3D G3DSA:1.10.3090.10 373 635 2.0E-43 T 28-03-2018 AL549_RS17850 af97db455486bdebe07b8b13758f88ab 873 Gene3D G3DSA:3.30.70.260 793 872 3.6E-9 T 28-03-2018 AL549_RS17850 af97db455486bdebe07b8b13758f88ab 873 PIRSF PIRSF006288 6 873 0.0 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AL549_RS17850 af97db455486bdebe07b8b13758f88ab 873 SUPERFAMILY SSF81301 33 172 2.45E-19 T 28-03-2018 AL549_RS17850 af97db455486bdebe07b8b13758f88ab 873 Gene3D G3DSA:1.20.120.330 173 317 2.7E-23 T 28-03-2018 AL549_RS17850 af97db455486bdebe07b8b13758f88ab 873 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 2.8E-35 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AL549_RS21815 f7543cd3f12c408657867d72e0c5ae46 85 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 3.0E-30 T 28-03-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AL549_RS21815 f7543cd3f12c408657867d72e0c5ae46 85 Gene3D G3DSA:1.20.20.10 4 78 1.1E-14 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AL549_RS21815 f7543cd3f12c408657867d72e0c5ae46 85 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.438 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21815 f7543cd3f12c408657867d72e0c5ae46 85 Pfam PF00137 ATP synthase subunit C 10 72 2.6E-10 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AL549_RS21815 f7543cd3f12c408657867d72e0c5ae46 85 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 28-03-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21815 f7543cd3f12c408657867d72e0c5ae46 85 PRINTS PR00124 ATP synthase C subunit signature 11 30 2.3E-6 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21815 f7543cd3f12c408657867d72e0c5ae46 85 PRINTS PR00124 ATP synthase C subunit signature 49 74 2.3E-6 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21815 f7543cd3f12c408657867d72e0c5ae46 85 PRINTS PR00124 ATP synthase C subunit signature 32 47 2.3E-6 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21815 f7543cd3f12c408657867d72e0c5ae46 85 SUPERFAMILY SSF81333 3 78 3.53E-19 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AL549_RS05720 c7d200863cb9e98fbe5eea44bb28433d 191 Gene3D G3DSA:3.30.70.1070 101 173 2.8E-5 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL549_RS05720 c7d200863cb9e98fbe5eea44bb28433d 191 Pfam PF05036 Sporulation related domain 101 173 3.0E-12 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL549_RS05720 c7d200863cb9e98fbe5eea44bb28433d 191 SUPERFAMILY SSF110997 101 164 9.15E-8 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL549_RS15880 067be5866378ed26e8757328f381a890 127 Gene3D G3DSA:3.10.180.10 8 126 1.7E-24 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS15880 067be5866378ed26e8757328f381a890 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 123 6.3E-7 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL549_RS15880 067be5866378ed26e8757328f381a890 127 SUPERFAMILY SSF54593 5 124 5.78E-24 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS22865 cdefea4ace078de25f0a17845698a343 473 ProSitePatterns PS00455 Putative AMP-binding domain signature. 132 143 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL549_RS22865 cdefea4ace078de25f0a17845698a343 473 Gene3D G3DSA:3.40.50.980 138 289 1.9E-30 T 28-03-2018 AL549_RS22865 cdefea4ace078de25f0a17845698a343 473 Gene3D G3DSA:3.40.50.980 1 106 3.5E-15 T 28-03-2018 AL549_RS22865 cdefea4ace078de25f0a17845698a343 473 Gene3D G3DSA:3.30.300.30 371 473 4.7E-22 T 28-03-2018 AL549_RS22865 cdefea4ace078de25f0a17845698a343 473 Gene3D G3DSA:3.40.50.980 107 137 8.3E-6 T 28-03-2018 AL549_RS22865 cdefea4ace078de25f0a17845698a343 473 Pfam PF00501 AMP-binding enzyme 9 376 9.2E-69 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL549_RS22865 cdefea4ace078de25f0a17845698a343 473 Pfam PF13193 AMP-binding enzyme C-terminal domain 386 464 7.8E-11 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL549_RS22865 cdefea4ace078de25f0a17845698a343 473 SUPERFAMILY SSF56801 4 472 1.2E-108 T 28-03-2018 AL549_RS22865 cdefea4ace078de25f0a17845698a343 473 Gene3D G3DSA:2.30.38.10 290 369 2.9E-17 T 28-03-2018 AL549_RS15065 960f071e0cf8dac7cbbb01d7b85c5daa 52 Pfam PF11665 Protein of unknown function (DUF3265) 25 52 9.1E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS23335 4e241cf31adac820ada71880b500cc83 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 6.2E-86 T 28-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AL549_RS23335 4e241cf31adac820ada71880b500cc83 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 181 1.0E-76 T 28-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AL549_RS23335 4e241cf31adac820ada71880b500cc83 183 Gene3D G3DSA:3.40.30.10 18 182 3.7E-5 T 28-03-2018 AL549_RS11460 fb9c7b4ca4033b98f9b61987de097b23 580 Gene3D G3DSA:3.40.50.300 1 166 6.3E-27 T 28-03-2018 AL549_RS11460 fb9c7b4ca4033b98f9b61987de097b23 580 SMART SM00490 261 344 2.2E-11 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS11460 fb9c7b4ca4033b98f9b61987de097b23 580 Gene3D G3DSA:3.40.50.300 220 359 5.6E-20 T 28-03-2018 AL549_RS11460 fb9c7b4ca4033b98f9b61987de097b23 580 SMART SM00487 1 177 2.1E-13 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS11460 fb9c7b4ca4033b98f9b61987de097b23 580 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 2.6E-23 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL549_RS11460 fb9c7b4ca4033b98f9b61987de097b23 580 SUPERFAMILY SSF57829 424 465 2.2E-6 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AL549_RS11460 fb9c7b4ca4033b98f9b61987de097b23 580 Pfam PF00271 Helicase conserved C-terminal domain 239 342 1.8E-13 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS11460 fb9c7b4ca4033b98f9b61987de097b23 580 SUPERFAMILY SSF52540 48 172 1.06E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11460 fb9c7b4ca4033b98f9b61987de097b23 580 SUPERFAMILY SSF52540 236 360 1.06E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS09390 a6c7b1784d793bfcda2388fcb60ef478 523 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 498 1.9E-23 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL549_RS09390 a6c7b1784d793bfcda2388fcb60ef478 523 Pfam PF02378 Phosphotransferase system, EIIC 11 353 4.8E-65 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL549_RS09390 a6c7b1784d793bfcda2388fcb60ef478 523 Gene3D G3DSA:3.30.1360.60 436 511 8.7E-26 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL549_RS09390 a6c7b1784d793bfcda2388fcb60ef478 523 Pfam PF00367 phosphotransferase system, EIIB 440 473 3.6E-13 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL549_RS09390 a6c7b1784d793bfcda2388fcb60ef478 523 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 509 7.5E-209 T 28-03-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 AL549_RS09390 a6c7b1784d793bfcda2388fcb60ef478 523 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 451 468 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL549_RS09390 a6c7b1784d793bfcda2388fcb60ef478 523 SUPERFAMILY SSF55604 438 510 5.75E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL549_RS19725 534904c753f1173e199d45b1e8794e28 969 SMART SM00487 150 346 1.1E-12 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS19725 534904c753f1173e199d45b1e8794e28 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.25 T 28-03-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 AL549_RS19725 534904c753f1173e199d45b1e8794e28 969 SUPERFAMILY SSF52540 118 378 2.4E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS19725 534904c753f1173e199d45b1e8794e28 969 SMART SM00490 519 603 2.7E-17 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS19725 534904c753f1173e199d45b1e8794e28 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 2.2E-150 T 28-03-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 AL549_RS19725 534904c753f1173e199d45b1e8794e28 969 Pfam PF00176 SNF2 family N-terminal domain 174 342 2.5E-14 T 28-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AL549_RS19725 534904c753f1173e199d45b1e8794e28 969 SUPERFAMILY SSF52540 482 651 2.66E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS19725 534904c753f1173e199d45b1e8794e28 969 SUPERFAMILY SSF52540 273 337 2.66E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS19725 534904c753f1173e199d45b1e8794e28 969 Gene3D G3DSA:3.40.50.10810 155 380 2.3E-23 T 28-03-2018 AL549_RS19725 534904c753f1173e199d45b1e8794e28 969 Gene3D G3DSA:3.40.50.300 482 943 1.9E-23 T 28-03-2018 AL549_RS19725 534904c753f1173e199d45b1e8794e28 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 1.8E-15 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS19330 2b45f422b7166dedbc3591f2f52c40a4 386 Gene3D G3DSA:3.40.50.1260 3 174 2.2E-61 T 28-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19330 2b45f422b7166dedbc3591f2f52c40a4 386 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 28-03-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19330 2b45f422b7166dedbc3591f2f52c40a4 386 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.293 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19330 2b45f422b7166dedbc3591f2f52c40a4 386 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 1.4E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19330 2b45f422b7166dedbc3591f2f52c40a4 386 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.4E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19330 2b45f422b7166dedbc3591f2f52c40a4 386 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.4E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19330 2b45f422b7166dedbc3591f2f52c40a4 386 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.4E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19330 2b45f422b7166dedbc3591f2f52c40a4 386 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.4E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19330 2b45f422b7166dedbc3591f2f52c40a4 386 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 1.4E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19330 2b45f422b7166dedbc3591f2f52c40a4 386 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.4E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19330 2b45f422b7166dedbc3591f2f52c40a4 386 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.4E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19330 2b45f422b7166dedbc3591f2f52c40a4 386 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 1.4E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19330 2b45f422b7166dedbc3591f2f52c40a4 386 Gene3D G3DSA:3.40.50.1260 175 371 1.0E-74 T 28-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19330 2b45f422b7166dedbc3591f2f52c40a4 386 SUPERFAMILY SSF53748 3 382 1.07E-144 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19330 2b45f422b7166dedbc3591f2f52c40a4 386 PIRSF PIRSF000724 1 386 2.2E-134 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19330 2b45f422b7166dedbc3591f2f52c40a4 386 Pfam PF00162 Phosphoglycerate kinase 6 373 2.7E-139 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS16065 94933a401921700df150d145df973141 541 SMART SM00283 271 532 8.2E-49 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS16065 94933a401921700df150d145df973141 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 497 1.1E-39 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS16065 94933a401921700df150d145df973141 541 SMART SM00304 203 256 2.0E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS16065 94933a401921700df150d145df973141 541 SUPERFAMILY SSF58104 224 534 1.01E-59 T 28-03-2018 AL549_RS16065 94933a401921700df150d145df973141 541 Gene3D G3DSA:1.10.287.950 301 536 1.8E-44 T 28-03-2018 AL549_RS16065 94933a401921700df150d145df973141 541 Gene3D G3DSA:1.10.287.950 167 300 0.076 T 28-03-2018 AL549_RS20055 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 1 75 2.8E-32 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20055 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20055 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 28-03-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20055 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20055 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20055 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20055 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20055 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20055 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20055 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.8E-25 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20055 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS19385 4eab0581aaebeda26ba67fc75b57a53b 187 Gene3D G3DSA:3.40.1740.10 110 179 7.4E-13 T 28-03-2018 AL549_RS19385 4eab0581aaebeda26ba67fc75b57a53b 187 Gene3D G3DSA:3.40.1740.10 1 95 3.5E-29 T 28-03-2018 AL549_RS19385 4eab0581aaebeda26ba67fc75b57a53b 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.241 T 28-03-2018 IPR003774 Protein of unknown function UPF0301 AL549_RS19385 4eab0581aaebeda26ba67fc75b57a53b 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 5.5E-52 T 28-03-2018 IPR003774 Protein of unknown function UPF0301 AL549_RS19385 4eab0581aaebeda26ba67fc75b57a53b 187 SUPERFAMILY SSF143456 1 187 3.01E-67 T 28-03-2018 AL549_RS15925 6bb3e2825e2cc109d8e3da12edb833b9 297 Pfam PF13353 4Fe-4S single cluster domain 21 146 5.2E-7 T 28-03-2018 AL549_RS15925 6bb3e2825e2cc109d8e3da12edb833b9 297 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS15925 6bb3e2825e2cc109d8e3da12edb833b9 297 Gene3D G3DSA:3.30.70.20 81 111 0.053 T 28-03-2018 AL549_RS15925 6bb3e2825e2cc109d8e3da12edb833b9 297 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 10 287 6.2E-123 T 28-03-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW AL549_RS15925 6bb3e2825e2cc109d8e3da12edb833b9 297 Gene3D G3DSA:3.30.70.20 61 80 1.4E-8 T 28-03-2018 AL549_RS15925 6bb3e2825e2cc109d8e3da12edb833b9 297 SUPERFAMILY SSF54862 28 143 2.51E-15 T 28-03-2018 AL549_RS15925 6bb3e2825e2cc109d8e3da12edb833b9 297 Gene3D G3DSA:3.30.70.20 3 60 9.9E-5 T 28-03-2018 AL549_RS15925 6bb3e2825e2cc109d8e3da12edb833b9 297 PIRSF PIRSF000371 1 293 5.1E-82 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AL549_RS15925 6bb3e2825e2cc109d8e3da12edb833b9 297 Pfam PF04055 Radical SAM superfamily 29 235 6.5E-14 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS15925 6bb3e2825e2cc109d8e3da12edb833b9 297 Gene3D G3DSA:3.80.30.10 116 284 5.6E-24 T 28-03-2018 AL549_RS15925 6bb3e2825e2cc109d8e3da12edb833b9 297 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 28-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AL549_RS19140 b4162f12567cd6edc544d67fe053e061 545 SUPERFAMILY SSF52317 289 538 6.66E-89 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS19140 b4162f12567cd6edc544d67fe053e061 545 Pfam PF06418 CTP synthase N-terminus 5 265 7.1E-125 T 28-03-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AL549_RS19140 b4162f12567cd6edc544d67fe053e061 545 SUPERFAMILY SSF52540 3 269 1.9E-121 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS19140 b4162f12567cd6edc544d67fe053e061 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 8.7E-64 T 28-03-2018 IPR017926 Glutamine amidotransferase AL549_RS19140 b4162f12567cd6edc544d67fe053e061 545 Gene3D G3DSA:3.40.50.880 286 542 3.2E-74 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS19140 b4162f12567cd6edc544d67fe053e061 545 Gene3D G3DSA:3.40.50.300 1 285 3.1E-127 T 28-03-2018 AL549_RS19140 b4162f12567cd6edc544d67fe053e061 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.404 T 28-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AL549_RS19140 b4162f12567cd6edc544d67fe053e061 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 3.2E-262 T 28-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AL549_RS00855 616f6bdbce9ff799492de1f1184c4573 234 SUPERFAMILY SSF52172 3 125 1.71E-35 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS00855 616f6bdbce9ff799492de1f1184c4573 234 Pfam PF00072 Response regulator receiver domain 8 115 3.5E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS00855 616f6bdbce9ff799492de1f1184c4573 234 SMART SM00862 151 227 4.6E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS00855 616f6bdbce9ff799492de1f1184c4573 234 SUPERFAMILY SSF46894 128 229 2.3E-24 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS00855 616f6bdbce9ff799492de1f1184c4573 234 Gene3D G3DSA:1.10.10.10 127 234 4.6E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00855 616f6bdbce9ff799492de1f1184c4573 234 SMART SM00448 5 115 2.9E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS00855 616f6bdbce9ff799492de1f1184c4573 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 6.6E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS00855 616f6bdbce9ff799492de1f1184c4573 234 Gene3D G3DSA:3.40.50.2300 2 126 2.6E-32 T 28-03-2018 AL549_RS10405 9315063bf216af7f59f148eb17495b8d 420 Gene3D G3DSA:1.10.3860.10 1 411 1.6E-115 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS10405 9315063bf216af7f59f148eb17495b8d 420 SUPERFAMILY SSF118215 15 403 1.31E-109 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS10405 9315063bf216af7f59f148eb17495b8d 420 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 1.5E-118 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS10405 9315063bf216af7f59f148eb17495b8d 420 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 1.1E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS10405 9315063bf216af7f59f148eb17495b8d 420 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 1.1E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS10405 9315063bf216af7f59f148eb17495b8d 420 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 1.1E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS10405 9315063bf216af7f59f148eb17495b8d 420 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 1.1E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS10405 9315063bf216af7f59f148eb17495b8d 420 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 1.1E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS10405 9315063bf216af7f59f148eb17495b8d 420 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 1.1E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS10405 9315063bf216af7f59f148eb17495b8d 420 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 1.1E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS10405 9315063bf216af7f59f148eb17495b8d 420 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 1.1E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS10405 9315063bf216af7f59f148eb17495b8d 420 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 1.1E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS23440 05926605a38daf5c0b80849af0008920 487 Pfam PF04963 Sigma-54 factor, core binding domain 126 315 8.7E-59 T 28-03-2018 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 AL549_RS23440 05926605a38daf5c0b80849af0008920 487 PRINTS PR00045 Sigma-54 factor signature 386 398 3.3E-31 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL549_RS23440 05926605a38daf5c0b80849af0008920 487 PRINTS PR00045 Sigma-54 factor signature 198 215 3.3E-31 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL549_RS23440 05926605a38daf5c0b80849af0008920 487 PRINTS PR00045 Sigma-54 factor signature 402 413 3.3E-31 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL549_RS23440 05926605a38daf5c0b80849af0008920 487 PRINTS PR00045 Sigma-54 factor signature 460 478 3.3E-31 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL549_RS23440 05926605a38daf5c0b80849af0008920 487 Pfam PF04552 Sigma-54, DNA binding domain 327 485 3.2E-72 T 28-03-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding AL549_RS23440 05926605a38daf5c0b80849af0008920 487 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 465 472 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL549_RS23440 05926605a38daf5c0b80849af0008920 487 Gene3D G3DSA:1.10.10.10 333 420 5.6E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS23440 05926605a38daf5c0b80849af0008920 487 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 3.8E-17 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL549_RS23440 05926605a38daf5c0b80849af0008920 487 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 374 393 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL549_RS23440 05926605a38daf5c0b80849af0008920 487 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 484 5.4E-156 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL549_RS23440 05926605a38daf5c0b80849af0008920 487 PIRSF PIRSF000774 1 487 5.5E-151 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL549_RS22820 8d0107e7a47bb30b52d676249ce16a99 357 Gene3D G3DSA:3.90.1210.10 293 357 2.6E-18 T 28-03-2018 AL549_RS22820 8d0107e7a47bb30b52d676249ce16a99 357 Pfam PF03102 NeuB family 22 289 1.2E-98 T 28-03-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 AL549_RS22820 8d0107e7a47bb30b52d676249ce16a99 357 SUPERFAMILY SSF51269 297 355 1.02E-16 T 28-03-2018 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 AL549_RS22820 8d0107e7a47bb30b52d676249ce16a99 357 SUPERFAMILY SSF51569 184 313 7.33E-78 T 28-03-2018 AL549_RS22820 8d0107e7a47bb30b52d676249ce16a99 357 SUPERFAMILY SSF51569 2 157 7.33E-78 T 28-03-2018 AL549_RS22820 8d0107e7a47bb30b52d676249ce16a99 357 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 2 355 6.2E-152 T 28-03-2018 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|KEGG: 00900+2.5.1.10|MetaCyc: PWY-5123|MetaCyc: PWY-6749|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7131|MetaCyc: PWY-7721|MetaCyc: PWY-7736 AL549_RS22820 8d0107e7a47bb30b52d676249ce16a99 357 Gene3D G3DSA:3.20.20.70 1 289 7.8E-85 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS12200 c328b7b48f63bf4d5d44977a50af0680 482 Gene3D G3DSA:3.40.50.720 2 180 2.0E-36 T 28-03-2018 AL549_RS12200 c328b7b48f63bf4d5d44977a50af0680 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 4.0E-234 T 28-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL549_RS12200 c328b7b48f63bf4d5d44977a50af0680 482 Gene3D G3DSA:1.20.5.320 435 482 3.7E-24 T 28-03-2018 AL549_RS12200 c328b7b48f63bf4d5d44977a50af0680 482 Gene3D G3DSA:1.10.1040.10 181 434 5.0E-106 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL549_RS12200 c328b7b48f63bf4d5d44977a50af0680 482 SUPERFAMILY SSF48179 177 472 1.13E-126 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL549_RS12200 c328b7b48f63bf4d5d44977a50af0680 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 28-03-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL549_RS12200 c328b7b48f63bf4d5d44977a50af0680 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 3.0E-126 T 28-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL549_RS12200 c328b7b48f63bf4d5d44977a50af0680 482 SUPERFAMILY SSF51735 4 174 6.79E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS12200 c328b7b48f63bf4d5d44977a50af0680 482 SMART SM01350 179 469 6.7E-215 T 28-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL549_RS12200 c328b7b48f63bf4d5d44977a50af0680 482 PIRSF PIRSF000109 1 477 1.0E-241 T 28-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL549_RS12200 c328b7b48f63bf4d5d44977a50af0680 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 3.5E-85 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL549_RS12200 c328b7b48f63bf4d5d44977a50af0680 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 3.5E-85 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL549_RS12200 c328b7b48f63bf4d5d44977a50af0680 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 3.5E-85 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL549_RS12200 c328b7b48f63bf4d5d44977a50af0680 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 3.5E-85 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL549_RS12200 c328b7b48f63bf4d5d44977a50af0680 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 3.5E-85 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL549_RS12200 c328b7b48f63bf4d5d44977a50af0680 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 3.5E-85 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL549_RS12200 c328b7b48f63bf4d5d44977a50af0680 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 3.9E-51 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AL549_RS18855 f55557796313416e2ea41185cb630baf 556 Gene3D G3DSA:3.30.750.24 431 550 3.3E-16 T 28-03-2018 IPR002645 STAS domain AL549_RS18855 f55557796313416e2ea41185cb630baf 556 Pfam PF00916 Sulfate permease family 11 376 1.5E-84 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AL549_RS18855 f55557796313416e2ea41185cb630baf 556 SUPERFAMILY SSF52091 439 541 4.12E-13 T 28-03-2018 IPR002645 STAS domain AL549_RS18855 f55557796313416e2ea41185cb630baf 556 Pfam PF01740 STAS domain 440 533 5.8E-15 T 28-03-2018 IPR002645 STAS domain AL549_RS17575 4049250dc1c0d130ce4e1e6cfe1e1482 233 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 27 179 1.2E-34 T 28-03-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 AL549_RS17575 4049250dc1c0d130ce4e1e6cfe1e1482 233 SUPERFAMILY SSF55166 19 176 2.12E-18 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL549_RS17575 4049250dc1c0d130ce4e1e6cfe1e1482 233 Gene3D G3DSA:3.30.1380.10 6 184 8.8E-29 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL549_RS18850 268265b8ef85b11054b64d6fb85f09a3 307 Gene3D G3DSA:3.40.50.300 1 288 1.1E-63 T 28-03-2018 AL549_RS18850 268265b8ef85b11054b64d6fb85f09a3 307 SMART SM00382 29 213 1.5E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS18850 268265b8ef85b11054b64d6fb85f09a3 307 SUPERFAMILY SSF52540 3 232 3.48E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18850 268265b8ef85b11054b64d6fb85f09a3 307 Pfam PF00005 ABC transporter 20 164 9.1E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS18850 268265b8ef85b11054b64d6fb85f09a3 307 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS04955 164a21a2c3e89a4b8dae604d17d6d424 665 SUPERFAMILY SSF55874 489 652 1.14E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS04955 164a21a2c3e89a4b8dae604d17d6d424 665 Gene3D G3DSA:1.10.287.130 394 495 2.6E-6 T 28-03-2018 AL549_RS04955 164a21a2c3e89a4b8dae604d17d6d424 665 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 62 168 3.2E-32 T 28-03-2018 IPR033414 Periplasmic sensor domain AL549_RS04955 164a21a2c3e89a4b8dae604d17d6d424 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 651 1.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS04955 164a21a2c3e89a4b8dae604d17d6d424 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 596 1.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS04955 164a21a2c3e89a4b8dae604d17d6d424 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 631 1.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS04955 164a21a2c3e89a4b8dae604d17d6d424 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 610 1.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS04955 164a21a2c3e89a4b8dae604d17d6d424 665 SUPERFAMILY SSF47384 412 480 5.69E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS04955 164a21a2c3e89a4b8dae604d17d6d424 665 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 547 653 1.3E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS04955 164a21a2c3e89a4b8dae604d17d6d424 665 Gene3D G3DSA:3.30.565.10 503 657 8.3E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS04955 164a21a2c3e89a4b8dae604d17d6d424 665 Gene3D G3DSA:3.30.450.20 244 387 3.7E-9 T 28-03-2018 AL549_RS04955 164a21a2c3e89a4b8dae604d17d6d424 665 SMART SM00387 542 654 7.8E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 SUPERFAMILY SSF51230 202 293 2.62E-23 T 28-03-2018 IPR011053 Single hybrid motif AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 Gene3D G3DSA:3.90.1170.30 1 43 1.1E-8 T 28-03-2018 AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 Gene3D G3DSA:3.90.1170.30 143 244 1.3E-21 T 28-03-2018 AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 Gene3D G3DSA:3.90.1170.30 44 142 4.5E-20 T 28-03-2018 AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 395 625 2.0E-79 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 Gene3D G3DSA:2.40.50.100 245 313 7.9E-9 T 28-03-2018 AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 SUPERFAMILY SSF51230 101 191 2.75E-22 T 28-03-2018 IPR011053 Single hybrid motif AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 Gene3D G3DSA:4.10.320.10 314 375 9.1E-18 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 Gene3D G3DSA:3.30.559.10 384 626 2.7E-79 T 28-03-2018 AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 224 253 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 SUPERFAMILY SSF47005 312 357 1.11E-12 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 SUPERFAMILY SSF52777 384 625 3.25E-81 T 28-03-2018 AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 180 626 1.1E-204 T 28-03-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 124 153 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 Pfam PF00364 Biotin-requiring enzyme 102 172 2.5E-20 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 Pfam PF00364 Biotin-requiring enzyme 4 73 6.0E-20 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 Pfam PF00364 Biotin-requiring enzyme 202 272 1.9E-21 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 SUPERFAMILY SSF51230 1 92 1.96E-21 T 28-03-2018 IPR011053 Single hybrid motif AL549_RS18880 3188e65a28a0aab1de841adb9cba663b 626 Pfam PF02817 e3 binding domain 319 353 3.3E-14 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL549_RS20515 dcc82952b893f49d4da86190b42d9658 154 Gene3D G3DSA:3.40.50.300 1 153 2.4E-52 T 28-03-2018 AL549_RS20515 dcc82952b893f49d4da86190b42d9658 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 2.3E-42 T 28-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AL549_RS20515 dcc82952b893f49d4da86190b42d9658 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 2.2E-51 T 28-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AL549_RS20515 dcc82952b893f49d4da86190b42d9658 154 SUPERFAMILY SSF52540 27 149 2.79E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS01085 69a02ca2db46310ea228617b91271433 298 SUPERFAMILY SSF53850 93 296 4.03E-30 T 28-03-2018 AL549_RS01085 69a02ca2db46310ea228617b91271433 298 Gene3D G3DSA:3.40.190.10 93 181 4.8E-15 T 28-03-2018 AL549_RS01085 69a02ca2db46310ea228617b91271433 298 SUPERFAMILY SSF46785 6 88 2.11E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01085 69a02ca2db46310ea228617b91271433 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.7E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01085 69a02ca2db46310ea228617b91271433 298 Gene3D G3DSA:1.10.10.10 1 89 3.2E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01085 69a02ca2db46310ea228617b91271433 298 Pfam PF03466 LysR substrate binding domain 91 294 1.2E-31 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS01085 69a02ca2db46310ea228617b91271433 298 Gene3D G3DSA:3.40.190.10 182 268 1.3E-22 T 28-03-2018 AL549_RS01085 69a02ca2db46310ea228617b91271433 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01085 69a02ca2db46310ea228617b91271433 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01085 69a02ca2db46310ea228617b91271433 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS12000 dfcab3092312f1a02835d7db7ff86fb1 544 Gene3D G3DSA:2.40.10.10 87 149 2.2E-19 T 28-03-2018 AL549_RS12000 dfcab3092312f1a02835d7db7ff86fb1 544 SUPERFAMILY SSF51055 407 457 1.83E-13 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS12000 dfcab3092312f1a02835d7db7ff86fb1 544 SUPERFAMILY SSF50494 22 286 4.66E-65 T 28-03-2018 IPR009003 Peptidase S1, PA clan AL549_RS12000 dfcab3092312f1a02835d7db7ff86fb1 544 Gene3D G3DSA:2.10.10.20 410 454 3.2E-14 T 28-03-2018 AL549_RS12000 dfcab3092312f1a02835d7db7ff86fb1 544 Gene3D G3DSA:2.10.10.20 485 544 4.0E-10 T 28-03-2018 AL549_RS12000 dfcab3092312f1a02835d7db7ff86fb1 544 Gene3D G3DSA:2.40.10.10 55 86 4.8E-12 T 28-03-2018 AL549_RS12000 dfcab3092312f1a02835d7db7ff86fb1 544 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 93 98 - T 28-03-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AL549_RS12000 dfcab3092312f1a02835d7db7ff86fb1 544 SMART SM00495 489 540 7.6E-5 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS12000 dfcab3092312f1a02835d7db7ff86fb1 544 SMART SM00495 411 456 1.4E-10 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS12000 dfcab3092312f1a02835d7db7ff86fb1 544 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 83 98 9.4E-13 T 28-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL549_RS12000 dfcab3092312f1a02835d7db7ff86fb1 544 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 231 243 9.4E-13 T 28-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL549_RS12000 dfcab3092312f1a02835d7db7ff86fb1 544 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 139 153 9.4E-13 T 28-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL549_RS12000 dfcab3092312f1a02835d7db7ff86fb1 544 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 232 243 - T 28-03-2018 IPR033116 Serine proteases, trypsin family, serine active site AL549_RS12000 dfcab3092312f1a02835d7db7ff86fb1 544 Gene3D G3DSA:2.40.10.10 150 288 6.2E-37 T 28-03-2018 AL549_RS12000 dfcab3092312f1a02835d7db7ff86fb1 544 SMART SM00020 54 281 3.5E-66 T 28-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL549_RS12000 dfcab3092312f1a02835d7db7ff86fb1 544 Gene3D G3DSA:2.60.40.10 292 398 6.8E-9 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12000 dfcab3092312f1a02835d7db7ff86fb1 544 Pfam PF00089 Trypsin 55 279 1.0E-51 T 28-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL549_RS16345 e097702d4d359e2ebad8e022e873935e 179 Pfam PF13521 AAA domain 4 167 1.6E-39 T 28-03-2018 AL549_RS16345 e097702d4d359e2ebad8e022e873935e 179 Gene3D G3DSA:3.40.50.300 2 172 8.4E-11 T 28-03-2018 AL549_RS16345 e097702d4d359e2ebad8e022e873935e 179 SUPERFAMILY SSF52540 4 171 2.95E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS05690 a23452d6e4d67bcf84295db5c26b20f7 373 Gene3D G3DSA:2.40.160.60 17 369 1.0E-25 T 28-03-2018 AL549_RS05690 a23452d6e4d67bcf84295db5c26b20f7 373 Pfam PF13729 F plasmid transfer operon, TraF, protein 46 290 2.3E-59 T 28-03-2018 IPR032811 Putative conjugal transfer protein TraF-related AL549_RS22125 38d51bcacdfa7c66f058b5068f31ee0e 148 Pfam PF07681 DoxX 24 104 5.5E-18 T 28-03-2018 IPR032808 DoxX family AL549_RS15725 957d3b099dccf2b49033aa8b6b5b3e3f 176 SMART SM00479 5 176 1.7E-4 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL549_RS15725 957d3b099dccf2b49033aa8b6b5b3e3f 176 SUPERFAMILY SSF53098 4 175 3.51E-30 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS15725 957d3b099dccf2b49033aa8b6b5b3e3f 176 Pfam PF00929 Exonuclease 7 171 2.6E-12 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL549_RS15725 957d3b099dccf2b49033aa8b6b5b3e3f 176 Gene3D G3DSA:3.30.420.10 1 176 3.1E-27 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS00630 3efc2a20b2120115911314fbffba5d79 959 SUPERFAMILY SSF109604 810 918 5.02E-9 T 28-03-2018 AL549_RS00630 3efc2a20b2120115911314fbffba5d79 959 Pfam PF02743 Cache domain 40 278 4.0E-13 T 28-03-2018 IPR033479 Double Cache domain 1 AL549_RS00630 3efc2a20b2120115911314fbffba5d79 959 Gene3D G3DSA:3.30.450.20 90 221 1.8E-16 T 28-03-2018 AL549_RS00630 3efc2a20b2120115911314fbffba5d79 959 Gene3D G3DSA:3.30.450.20 222 337 5.8E-4 T 28-03-2018 AL549_RS00630 3efc2a20b2120115911314fbffba5d79 959 SUPERFAMILY SSF55781 406 569 7.36E-6 T 28-03-2018 IPR029016 GAF domain-like AL549_RS00630 3efc2a20b2120115911314fbffba5d79 959 Pfam PF13487 HD domain 809 874 2.9E-24 T 28-03-2018 AL549_RS00630 3efc2a20b2120115911314fbffba5d79 959 SUPERFAMILY SSF103190 157 232 5.96E-7 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL549_RS00630 3efc2a20b2120115911314fbffba5d79 959 Gene3D G3DSA:1.10.3210.10 547 749 1.3E-29 T 28-03-2018 AL549_RS00630 3efc2a20b2120115911314fbffba5d79 959 Gene3D G3DSA:1.10.3210.10 791 932 2.8E-18 T 28-03-2018 AL549_RS00630 3efc2a20b2120115911314fbffba5d79 959 SMART SM00471 583 892 1.4E-5 T 28-03-2018 IPR003607 HD/PDEase domain AL549_RS00630 3efc2a20b2120115911314fbffba5d79 959 Gene3D G3DSA:3.30.450.40 402 546 0.0031 T 28-03-2018 IPR029016 GAF domain-like AL549_RS00630 3efc2a20b2120115911314fbffba5d79 959 SUPERFAMILY SSF109604 578 687 8.48E-7 T 28-03-2018 AL549_RS00260 0f93267703040dc45e4ba988c19e04b7 763 Pfam PF01483 Proprotein convertase P-domain 630 715 1.8E-18 T 28-03-2018 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 AL549_RS00260 0f93267703040dc45e4ba988c19e04b7 763 SUPERFAMILY SSF55486 171 486 6.67E-42 T 28-03-2018 AL549_RS00260 0f93267703040dc45e4ba988c19e04b7 763 Gene3D G3DSA:3.10.170.10 163 320 5.2E-4 T 28-03-2018 AL549_RS00260 0f93267703040dc45e4ba988c19e04b7 763 SUPERFAMILY SSF49785 590 717 1.11E-18 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS00260 0f93267703040dc45e4ba988c19e04b7 763 Gene3D G3DSA:2.60.120.260 573 725 8.1E-16 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS00950 05f5e0397abf05a1401397041a66cd8b 376 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 308 339 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site AL549_RS00950 05f5e0397abf05a1401397041a66cd8b 376 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 3 375 1.2E-175 T 28-03-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 AL549_RS00950 05f5e0397abf05a1401397041a66cd8b 376 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 2 368 1.0E-55 T 28-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AL549_RS00950 05f5e0397abf05a1401397041a66cd8b 376 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 209 375 1.8E-21 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AL549_RS00950 05f5e0397abf05a1401397041a66cd8b 376 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 376 81.104 T 28-03-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 AL549_RS00950 05f5e0397abf05a1401397041a66cd8b 376 Gene3D G3DSA:3.40.50.150 1 374 8.3E-50 T 28-03-2018 AL549_RS00950 05f5e0397abf05a1401397041a66cd8b 376 SUPERFAMILY SSF53335 2 375 3.38E-60 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS01975 3b890beec2016db7e75acab05ea059cd 119 SMART SM00448 2 115 3.0E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS01975 3b890beec2016db7e75acab05ea059cd 119 SUPERFAMILY SSF52172 1 119 2.56E-38 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS01975 3b890beec2016db7e75acab05ea059cd 119 Gene3D G3DSA:3.40.50.2300 1 119 6.5E-38 T 28-03-2018 AL549_RS01975 3b890beec2016db7e75acab05ea059cd 119 Pfam PF00072 Response regulator receiver domain 4 115 1.9E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS01900 c718345ff045c0d5af3e9ae52c032029 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 27.973 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS01900 c718345ff045c0d5af3e9ae52c032029 238 Gene3D G3DSA:1.10.10.200 21 74 5.1E-20 T 28-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like AL549_RS01900 c718345ff045c0d5af3e9ae52c032029 238 Pfam PF01709 Transcriptional regulator 5 236 1.2E-73 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS01900 c718345ff045c0d5af3e9ae52c032029 238 SUPERFAMILY SSF75625 1 237 7.19E-77 T 28-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS01900 c718345ff045c0d5af3e9ae52c032029 238 Gene3D G3DSA:3.30.70.980 80 171 3.8E-25 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS01900 c718345ff045c0d5af3e9ae52c032029 238 Gene3D G3DSA:3.30.70.980 172 238 2.5E-10 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS06340 54ff4468cf0c31e75a42553838aea2e4 555 Gene3D G3DSA:1.25.40.10 142 453 1.1E-16 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS06340 54ff4468cf0c31e75a42553838aea2e4 555 Gene3D G3DSA:3.40.50.2300 4 141 1.3E-19 T 28-03-2018 AL549_RS06340 54ff4468cf0c31e75a42553838aea2e4 555 SUPERFAMILY SSF48452 179 323 1.44E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS06340 54ff4468cf0c31e75a42553838aea2e4 555 SUPERFAMILY SSF52172 14 150 1.29E-19 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS06340 54ff4468cf0c31e75a42553838aea2e4 555 Pfam PF00072 Response regulator receiver domain 18 134 7.4E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS06340 54ff4468cf0c31e75a42553838aea2e4 555 SMART SM00448 16 134 2.0E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS06340 54ff4468cf0c31e75a42553838aea2e4 555 PIRSF PIRSF011521 9 553 4.3E-276 T 28-03-2018 IPR014460 Signal transduction response regulator, predicted, VieB AL549_RS06280 1ec79b3e64600a9948ae482548b6db9a 505 Gene3D G3DSA:3.30.1120.10 396 492 3.0E-16 T 28-03-2018 AL549_RS06280 1ec79b3e64600a9948ae482548b6db9a 505 Pfam PF00884 Sulfatase 34 359 2.2E-66 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL549_RS06280 1ec79b3e64600a9948ae482548b6db9a 505 SUPERFAMILY SSF53649 31 485 4.22E-126 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS06280 1ec79b3e64600a9948ae482548b6db9a 505 Gene3D G3DSA:3.40.720.10 30 257 1.7E-54 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS06280 1ec79b3e64600a9948ae482548b6db9a 505 Gene3D G3DSA:3.40.720.10 258 395 9.9E-31 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS21105 1d2b620e261482edea9475029b9aa509 613 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 1 613 33.793 T 28-03-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 AL549_RS21105 1d2b620e261482edea9475029b9aa509 613 Pfam PF00593 TonB dependent receptor 188 612 1.6E-46 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL549_RS21105 1d2b620e261482edea9475029b9aa509 613 Gene3D G3DSA:2.40.170.20 155 613 3.5E-68 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL549_RS21105 1d2b620e261482edea9475029b9aa509 613 SUPERFAMILY SSF56935 29 613 9.66E-116 T 28-03-2018 AL549_RS21105 1d2b620e261482edea9475029b9aa509 613 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 28-03-2018 IPR010916 TonB box, conserved site AL549_RS21105 1d2b620e261482edea9475029b9aa509 613 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 148 4.2E-29 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL549_RS21105 1d2b620e261482edea9475029b9aa509 613 Gene3D G3DSA:2.170.130.10 19 153 1.3E-34 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL549_RS05650 76386df7d8f9bf3f86f6a8e74c803e5c 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 362 408 5.7E-6 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05650 76386df7d8f9bf3f86f6a8e74c803e5c 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 341 3.3E-22 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05650 76386df7d8f9bf3f86f6a8e74c803e5c 414 SUPERFAMILY SSF55073 243 410 2.59E-33 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS05650 76386df7d8f9bf3f86f6a8e74c803e5c 414 SMART SM00267 226 412 3.8E-34 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05650 76386df7d8f9bf3f86f6a8e74c803e5c 414 Gene3D G3DSA:3.30.70.270 229 413 8.4E-42 T 28-03-2018 AL549_RS05650 76386df7d8f9bf3f86f6a8e74c803e5c 414 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 237 354 8.0E-23 T 28-03-2018 IPR000160 GGDEF domain AL549_RS16435 a1b659696d424b579bcc7bab5ef3e634 449 SUPERFAMILY SSF69304 175 447 1.57E-57 T 28-03-2018 AL549_RS16435 a1b659696d424b579bcc7bab5ef3e634 449 Hamap MF_00671 Protein TolB [tolB]. 6 445 35.576 T 28-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AL549_RS16435 a1b659696d424b579bcc7bab5ef3e634 449 Gene3D G3DSA:3.40.50.10070 23 183 1.6E-41 T 28-03-2018 AL549_RS16435 a1b659696d424b579bcc7bab5ef3e634 449 SUPERFAMILY SSF52964 29 180 2.88E-41 T 28-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AL549_RS16435 a1b659696d424b579bcc7bab5ef3e634 449 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 16 446 4.2E-167 T 28-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AL549_RS16435 a1b659696d424b579bcc7bab5ef3e634 449 Gene3D G3DSA:2.130.10.150 184 266 2.2E-9 T 28-03-2018 AL549_RS16435 a1b659696d424b579bcc7bab5ef3e634 449 Gene3D G3DSA:2.130.10.150 267 448 2.7E-32 T 28-03-2018 AL549_RS16435 a1b659696d424b579bcc7bab5ef3e634 449 Pfam PF07676 WD40-like Beta Propeller Repeat 299 335 2.7E-13 T 28-03-2018 IPR011659 WD40-like Beta Propeller AL549_RS16435 a1b659696d424b579bcc7bab5ef3e634 449 Pfam PF07676 WD40-like Beta Propeller Repeat 221 247 4.7E-8 T 28-03-2018 IPR011659 WD40-like Beta Propeller AL549_RS16435 a1b659696d424b579bcc7bab5ef3e634 449 Pfam PF07676 WD40-like Beta Propeller Repeat 256 291 1.7E-10 T 28-03-2018 IPR011659 WD40-like Beta Propeller AL549_RS16435 a1b659696d424b579bcc7bab5ef3e634 449 Pfam PF04052 TolB amino-terminal domain 25 126 4.0E-35 T 28-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AL549_RS20935 a0da09a8e9aebc8e584687781c738667 261 Hamap MF_00297 NADH pyrophosphatase [nudC]. 3 260 41.8 T 28-03-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AL549_RS20935 a0da09a8e9aebc8e584687781c738667 261 ProSitePatterns PS00893 Nudix box signature. 164 185 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL549_RS20935 a0da09a8e9aebc8e584687781c738667 261 SUPERFAMILY SSF55811 62 248 7.34E-45 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL549_RS20935 a0da09a8e9aebc8e584687781c738667 261 Gene3D G3DSA:3.90.79.10 131 261 5.7E-35 T 28-03-2018 AL549_RS20935 a0da09a8e9aebc8e584687781c738667 261 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 99 129 2.3E-10 T 28-03-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AL549_RS20935 a0da09a8e9aebc8e584687781c738667 261 Pfam PF00293 NUDIX domain 137 236 9.1E-19 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL549_RS20935 a0da09a8e9aebc8e584687781c738667 261 PRINTS PR00502 NUDIX hydrolase family signature 159 173 3.0E-5 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL549_RS20935 a0da09a8e9aebc8e584687781c738667 261 PRINTS PR00502 NUDIX hydrolase family signature 173 188 3.0E-5 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL549_RS07830 941704b08753e8105f09cba010a07b9a 227 SUPERFAMILY SSF52980 2 220 4.5E-83 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL549_RS07830 941704b08753e8105f09cba010a07b9a 227 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 4 219 7.8E-100 T 28-03-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AL549_RS07830 941704b08753e8105f09cba010a07b9a 227 SMART SM00927 53 151 3.1E-64 T 28-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AL549_RS07830 941704b08753e8105f09cba010a07b9a 227 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 2.1E-33 T 28-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AL549_RS07830 941704b08753e8105f09cba010a07b9a 227 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 227 148.817 T 28-03-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AL549_RS07830 941704b08753e8105f09cba010a07b9a 227 Gene3D G3DSA:3.40.600.10 3 223 8.2E-57 T 28-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 SUPERFAMILY SSF52402 189 412 5.29E-58 T 28-03-2018 AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.0E-6 T 28-03-2018 AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.0E-6 T 28-03-2018 AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.0E-6 T 28-03-2018 AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 1.4E-42 T 28-03-2018 IPR017926 Glutamine amidotransferase AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 Pfam PF02540 NAD synthase 212 285 1.1E-7 T 28-03-2018 IPR022310 NAD/GMP synthase AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 5.0E-85 T 28-03-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 Gene3D G3DSA:3.40.50.620 190 407 1.3E-41 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 2.4E-156 T 28-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 Gene3D G3DSA:3.40.50.880 7 189 2.2E-45 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 SUPERFAMILY SSF54810 397 517 4.71E-51 T 28-03-2018 AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.3E-43 T 28-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.664 T 28-03-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.1E-6 T 28-03-2018 AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.1E-6 T 28-03-2018 AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 2.1E-6 T 28-03-2018 AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 SUPERFAMILY SSF52317 8 229 1.15E-57 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 Gene3D G3DSA:3.30.300.10 408 517 1.2E-52 T 28-03-2018 AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.4E-7 T 28-03-2018 AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.4E-7 T 28-03-2018 AL549_RS08335 11998ee3a0a818f7dac5a9718b901145 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.4E-7 T 28-03-2018 AL549_RS14510 139b45501495444f4815597e9ece5eee 151 Pfam PF15655 NTF2 fold immunity protein 24 140 2.8E-7 T 28-03-2018 IPR028049 NTF2 fold immunity protein AL549_RS22075 70ceac7c13663e8016a58389c90b578e 647 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 597 56.386 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL549_RS22075 70ceac7c13663e8016a58389c90b578e 647 Pfam PF01964 Radical SAM ThiC family 144 592 2.6E-199 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL549_RS22075 70ceac7c13663e8016a58389c90b578e 647 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 5.9E-219 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL549_RS22075 70ceac7c13663e8016a58389c90b578e 647 Pfam PF13667 ThiC-associated domain 22 104 3.9E-33 T 28-03-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL549_RS02405 2b1596f01b9a643dbb9d07d6266030d4 209 SUPERFAMILY SSF51569 4 208 2.38E-67 T 28-03-2018 AL549_RS02405 2b1596f01b9a643dbb9d07d6266030d4 209 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 206 6.0E-83 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL549_RS02405 2b1596f01b9a643dbb9d07d6266030d4 209 Pfam PF01081 KDPG and KHG aldolase 4 198 1.4E-78 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL549_RS02405 2b1596f01b9a643dbb9d07d6266030d4 209 Gene3D G3DSA:3.20.20.70 1 209 3.1E-32 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS02405 2b1596f01b9a643dbb9d07d6266030d4 209 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 28-03-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL549_RS02405 2b1596f01b9a643dbb9d07d6266030d4 209 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 28-03-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 SUPERFAMILY SSF56042 432 615 7.18E-54 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 SUPERFAMILY SSF55326 221 428 1.15E-65 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 Gene3D G3DSA:3.40.50.880 1040 1296 1.7E-33 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 SUPERFAMILY SSF56042 825 1035 1.79E-53 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 967 6.2E-13 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 2.8E-28 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 SUPERFAMILY SSF55326 619 816 9.16E-69 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1295 0.0 T 28-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1041 1294 5.6E-105 T 28-03-2018 AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 SUPERFAMILY SSF52317 1037 1295 9.35E-98 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 SUPERFAMILY SSF82697 1 151 4.29E-51 T 28-03-2018 AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 Gene3D G3DSA:3.90.650.10 426 607 1.4E-29 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 Gene3D G3DSA:3.90.650.10 822 996 2.0E-28 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 SUPERFAMILY SSF109736 155 220 7.59E-22 T 28-03-2018 AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 SMART SM01211 1041 1296 2.9E-156 T 28-03-2018 AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1297 21.329 T 28-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 Gene3D G3DSA:3.30.1330.10 183 217 0.0058 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 Gene3D G3DSA:3.30.1330.10 218 425 6.6E-50 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL549_RS08560 2c2bb0379185200cd3690bd22d2813f8 1297 Gene3D G3DSA:3.30.1330.10 613 813 6.2E-24 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AL549_RS06075 e3fdd6365727e6c6f0fb9918f5a3b7f5 325 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 9 313 6.0E-101 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AL549_RS06075 e3fdd6365727e6c6f0fb9918f5a3b7f5 325 SUPERFAMILY SSF53613 10 297 1.56E-70 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS06075 e3fdd6365727e6c6f0fb9918f5a3b7f5 325 PIRSF PIRSF000535 6 315 1.9E-95 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AL549_RS06075 e3fdd6365727e6c6f0fb9918f5a3b7f5 325 Pfam PF00294 pfkB family carbohydrate kinase 29 298 3.7E-51 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AL549_RS06075 e3fdd6365727e6c6f0fb9918f5a3b7f5 325 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 9 313 2.9E-101 T 28-03-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 AL549_RS06075 e3fdd6365727e6c6f0fb9918f5a3b7f5 325 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 43 67 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL549_RS06075 e3fdd6365727e6c6f0fb9918f5a3b7f5 325 Gene3D G3DSA:3.40.1190.20 51 316 2.3E-50 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS06075 e3fdd6365727e6c6f0fb9918f5a3b7f5 325 Gene3D G3DSA:2.20.150.10 16 50 1.7E-11 T 28-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain AL549_RS08625 aca495190eeaaa791564fc014e88e930 368 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 358 1.7E-127 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 AL549_RS08625 aca495190eeaaa791564fc014e88e930 368 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL549_RS08625 aca495190eeaaa791564fc014e88e930 368 PIRSF PIRSF006769 3 366 1.2E-119 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 AL549_RS08625 aca495190eeaaa791564fc014e88e930 368 SUPERFAMILY SSF53927 8 150 2.3E-47 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL549_RS08625 aca495190eeaaa791564fc014e88e930 368 SUPERFAMILY SSF53597 149 361 1.48E-52 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL549_RS08625 aca495190eeaaa791564fc014e88e930 368 Gene3D G3DSA:3.40.140.10 5 129 1.7E-33 T 28-03-2018 AL549_RS08625 aca495190eeaaa791564fc014e88e930 368 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 360 1.2E-55 T 28-03-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AL549_RS08625 aca495190eeaaa791564fc014e88e930 368 Gene3D G3DSA:3.40.430.10 130 366 8.8E-61 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL549_RS08625 aca495190eeaaa791564fc014e88e930 368 Pfam PF01872 RibD C-terminal domain 152 357 1.5E-46 T 28-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AL549_RS08625 aca495190eeaaa791564fc014e88e930 368 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 104 8.3E-19 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AL549_RS03840 070ab97d054ffc48d77edc9019190930 302 SUPERFAMILY SSF46689 61 109 9.68E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS03840 070ab97d054ffc48d77edc9019190930 302 Gene3D G3DSA:3.20.80.10 153 301 2.2E-19 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain AL549_RS03840 070ab97d054ffc48d77edc9019190930 302 Pfam PF06445 GyrI-like small molecule binding domain 154 294 1.4E-27 T 28-03-2018 IPR029442 GyrI-like small molecule binding domain AL549_RS03840 070ab97d054ffc48d77edc9019190930 302 SUPERFAMILY SSF46689 8 59 3.27E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS03840 070ab97d054ffc48d77edc9019190930 302 SMART SM00871 152 301 2.0E-19 T 28-03-2018 IPR010499 Bacterial transcription activator, effector binding AL549_RS03840 070ab97d054ffc48d77edc9019190930 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 92 108 1.5E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS03840 070ab97d054ffc48d77edc9019190930 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 77 92 1.5E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS03840 070ab97d054ffc48d77edc9019190930 302 Gene3D G3DSA:1.10.10.60 6 61 3.9E-18 T 28-03-2018 AL549_RS03840 070ab97d054ffc48d77edc9019190930 302 Gene3D G3DSA:1.10.10.60 62 111 9.7E-12 T 28-03-2018 AL549_RS03840 070ab97d054ffc48d77edc9019190930 302 SUPERFAMILY SSF55136 155 300 9.16E-29 T 28-03-2018 AL549_RS03840 070ab97d054ffc48d77edc9019190930 302 SMART SM00342 25 108 1.4E-33 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS03840 070ab97d054ffc48d77edc9019190930 302 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 104 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL549_RS03840 070ab97d054ffc48d77edc9019190930 302 Pfam PF12833 Helix-turn-helix domain 31 109 4.0E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS07285 825cfa701b25a3a36cc80c483bc3a31d 177 SUPERFAMILY SSF89028 7 169 7.26E-36 T 28-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AL549_RS07285 825cfa701b25a3a36cc80c483bc3a31d 177 Pfam PF01923 Cobalamin adenosyltransferase 20 156 1.9E-14 T 28-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AL549_RS07285 825cfa701b25a3a36cc80c483bc3a31d 177 Gene3D G3DSA:1.20.1200.10 16 174 5.2E-23 T 28-03-2018 AL549_RS07285 825cfa701b25a3a36cc80c483bc3a31d 177 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 28 149 8.0E-48 T 28-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AL549_RS05515 3e93fe48f004609a7baa52e0cbf4c00c 438 Pfam PF07394 Protein of unknown function (DUF1501) 34 421 3.1E-73 T 28-03-2018 IPR010869 Protein of unknown function DUF1501 AL549_RS16895 431312cce890d4d87f83b823b31e4252 129 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 4.6E-28 T 28-03-2018 IPR010824 Protein of unknown function DUF1425 AL549_RS21445 7aab08900f3938e265a02cdecd3239b4 458 Pfam PF02447 GntP family permease 13 457 3.1E-118 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL549_RS21445 7aab08900f3938e265a02cdecd3239b4 458 Gene3D G3DSA:3.40.50.720 317 448 0.0015 T 28-03-2018 AL549_RS21445 7aab08900f3938e265a02cdecd3239b4 458 PIRSF PIRSF002746 9 458 3.7E-145 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL549_RS21445 7aab08900f3938e265a02cdecd3239b4 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 14 458 3.1E-106 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL549_RS11360 2c30afadfbd0d8078c317f720b15f4fa 231 Pfam PF00849 RNA pseudouridylate synthase 10 153 3.6E-24 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS11360 2c30afadfbd0d8078c317f720b15f4fa 231 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 1.7E-104 T 28-03-2018 IPR006508 Pseudouridine synthase, RluA-like AL549_RS11360 2c30afadfbd0d8078c317f720b15f4fa 231 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS11360 2c30afadfbd0d8078c317f720b15f4fa 231 SUPERFAMILY SSF55120 2 197 1.02E-44 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS11360 2c30afadfbd0d8078c317f720b15f4fa 231 Gene3D G3DSA:3.30.2350.10 1 207 2.6E-46 T 28-03-2018 AL549_RS21335 e067f4b14e564076a0cdfeca1b7d312d 104 SMART SM01219 1 104 1.3E-54 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL549_RS21335 e067f4b14e564076a0cdfeca1b7d312d 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 4.7E-43 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL549_RS21335 e067f4b14e564076a0cdfeca1b7d312d 104 SUPERFAMILY SSF55387 1 103 3.66E-39 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL549_RS21335 e067f4b14e564076a0cdfeca1b7d312d 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 28-03-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL549_RS21335 e067f4b14e564076a0cdfeca1b7d312d 104 Pfam PF01491 Frataxin-like domain 1 100 1.3E-29 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL549_RS21335 e067f4b14e564076a0cdfeca1b7d312d 104 Gene3D G3DSA:3.30.920.10 1 104 1.8E-31 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL549_RS21335 e067f4b14e564076a0cdfeca1b7d312d 104 Hamap MF_00142 Protein CyaY [cyaY]. 1 103 27.961 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL549_RS06460 a8bde99da35e1f28e47002a0234bbf69 251 SUPERFAMILY SSF52540 2 226 2.78E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06460 a8bde99da35e1f28e47002a0234bbf69 251 SMART SM00382 26 213 9.7E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS06460 a8bde99da35e1f28e47002a0234bbf69 251 Pfam PF00005 ABC transporter 20 164 1.4E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS06460 a8bde99da35e1f28e47002a0234bbf69 251 Gene3D G3DSA:3.40.50.300 1 233 4.0E-57 T 28-03-2018 AL549_RS06460 a8bde99da35e1f28e47002a0234bbf69 251 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS08100 d7f212b324b495070d880ef455347ecf 761 Gene3D G3DSA:2.130.10.10 82 223 0.0011 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL549_RS08100 d7f212b324b495070d880ef455347ecf 761 Gene3D G3DSA:2.130.10.10 224 452 1.2E-4 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL549_RS08100 d7f212b324b495070d880ef455347ecf 761 Gene3D G3DSA:1.10.3720.10 453 564 4.5E-7 T 28-03-2018 AL549_RS08100 d7f212b324b495070d880ef455347ecf 761 Gene3D G3DSA:1.10.3720.10 565 748 5.2E-24 T 28-03-2018 AL549_RS08100 d7f212b324b495070d880ef455347ecf 761 SUPERFAMILY SSF161098 607 698 6.83E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS08100 d7f212b324b495070d880ef455347ecf 761 SUPERFAMILY SSF161098 457 524 6.83E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS08100 d7f212b324b495070d880ef455347ecf 761 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 479 755 6.8E-11 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS08100 d7f212b324b495070d880ef455347ecf 761 SUPERFAMILY SSF69322 99 406 1.28E-10 T 28-03-2018 AL549_RS09810 0259835cb1a4332a79cc36fcf5f62e9a 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 2.1E-104 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL549_RS09810 0259835cb1a4332a79cc36fcf5f62e9a 332 PIRSF PIRSF006470 1 332 2.7E-121 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL549_RS09810 0259835cb1a4332a79cc36fcf5f62e9a 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 277 1.1E-78 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL549_RS19980 079b79886728665067ffeebd0a1cd7d2 578 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 566 3.1E-286 T 28-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS19980 079b79886728665067ffeebd0a1cd7d2 578 SUPERFAMILY SSF55124 352 428 1.8E-21 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS19980 079b79886728665067ffeebd0a1cd7d2 578 PRINTS PR00397 Sirohaem Fe-binding site signature 485 503 4.7E-9 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS19980 079b79886728665067ffeebd0a1cd7d2 578 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 4.7E-9 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS19980 079b79886728665067ffeebd0a1cd7d2 578 SUPERFAMILY SSF56014 435 567 1.31E-32 T 28-03-2018 AL549_RS19980 079b79886728665067ffeebd0a1cd7d2 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 437 558 2.1E-4 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS19980 079b79886728665067ffeebd0a1cd7d2 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 337 9.9E-46 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS19980 079b79886728665067ffeebd0a1cd7d2 578 Gene3D G3DSA:3.30.413.10 432 569 4.8E-23 T 28-03-2018 AL549_RS19980 079b79886728665067ffeebd0a1cd7d2 578 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 578 58.636 T 28-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS19980 079b79886728665067ffeebd0a1cd7d2 578 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 485 501 - T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS19980 079b79886728665067ffeebd0a1cd7d2 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 6.7E-14 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS19980 079b79886728665067ffeebd0a1cd7d2 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 359 423 2.6E-14 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS19980 079b79886728665067ffeebd0a1cd7d2 578 SUPERFAMILY SSF55124 17 150 1.08E-27 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL549_RS19980 079b79886728665067ffeebd0a1cd7d2 578 SUPERFAMILY SSF56014 154 350 6.02E-57 T 28-03-2018 AL549_RS19980 079b79886728665067ffeebd0a1cd7d2 578 Gene3D G3DSA:3.30.413.10 146 351 3.4E-48 T 28-03-2018 AL549_RS02150 2992ec7db6ee49d527717b0e3c376d63 637 SUPERFAMILY SSF141868 411 636 2.88E-40 T 28-03-2018 IPR001633 EAL domain AL549_RS02150 2992ec7db6ee49d527717b0e3c376d63 637 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 9.5E-37 T 28-03-2018 IPR032244 LapD/MoxY, periplasmic domain AL549_RS02150 2992ec7db6ee49d527717b0e3c376d63 637 Pfam PF00563 EAL domain 411 635 3.4E-40 T 28-03-2018 IPR001633 EAL domain AL549_RS02150 2992ec7db6ee49d527717b0e3c376d63 637 SUPERFAMILY SSF55073 243 391 4.55E-17 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS02150 2992ec7db6ee49d527717b0e3c376d63 637 Gene3D G3DSA:3.20.20.450 394 637 3.2E-42 T 28-03-2018 IPR001633 EAL domain AL549_RS02150 2992ec7db6ee49d527717b0e3c376d63 637 SMART SM00052 403 635 8.0E-12 T 28-03-2018 IPR001633 EAL domain AL549_RS02150 2992ec7db6ee49d527717b0e3c376d63 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 387 1.0E-13 T 28-03-2018 IPR000160 GGDEF domain AL549_RS02150 2992ec7db6ee49d527717b0e3c376d63 637 SMART SM00267 226 393 4.3E-13 T 28-03-2018 IPR000160 GGDEF domain AL549_RS02150 2992ec7db6ee49d527717b0e3c376d63 637 Gene3D G3DSA:3.30.70.270 227 393 1.3E-21 T 28-03-2018 AL549_RS16675 b24b0dbf387d7a9eeb6e45b030d71479 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 741 0.0 T 28-03-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AL549_RS16675 b24b0dbf387d7a9eeb6e45b030d71479 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 28-03-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AL549_RS16675 b24b0dbf387d7a9eeb6e45b030d71479 741 Gene3D G3DSA:3.40.718.10 436 708 1.7E-43 T 28-03-2018 AL549_RS16675 b24b0dbf387d7a9eeb6e45b030d71479 741 Gene3D G3DSA:3.40.718.10 77 367 7.1E-41 T 28-03-2018 AL549_RS16675 b24b0dbf387d7a9eeb6e45b030d71479 741 PIRSF PIRSF009407 1 741 0.0 T 28-03-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AL549_RS16675 b24b0dbf387d7a9eeb6e45b030d71479 741 SUPERFAMILY SSF53659 5 740 0.0 T 28-03-2018 AL549_RS04830 73ef9add6cf30920fa1f526b2d72f32c 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 2.6E-25 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL549_RS04830 73ef9add6cf30920fa1f526b2d72f32c 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 3.0E-51 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL549_RS04830 73ef9add6cf30920fa1f526b2d72f32c 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL549_RS04830 73ef9add6cf30920fa1f526b2d72f32c 384 Gene3D G3DSA:1.10.540.10 1 118 1.3E-29 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL549_RS04830 73ef9add6cf30920fa1f526b2d72f32c 384 Gene3D G3DSA:1.20.140.10 216 384 1.8E-62 T 28-03-2018 AL549_RS04830 73ef9add6cf30920fa1f526b2d72f32c 384 PIRSF PIRSF016578 3 192 3.6E-12 T 28-03-2018 AL549_RS04830 73ef9add6cf30920fa1f526b2d72f32c 384 PIRSF PIRSF016578 210 382 3.6E-15 T 28-03-2018 AL549_RS04830 73ef9add6cf30920fa1f526b2d72f32c 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 1.8E-26 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL549_RS04830 73ef9add6cf30920fa1f526b2d72f32c 384 Gene3D G3DSA:2.40.110.10 120 215 5.6E-39 T 28-03-2018 AL549_RS04830 73ef9add6cf30920fa1f526b2d72f32c 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL549_RS04830 73ef9add6cf30920fa1f526b2d72f32c 384 SUPERFAMILY SSF56645 1 240 2.36E-78 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL549_RS04830 73ef9add6cf30920fa1f526b2d72f32c 384 SUPERFAMILY SSF47203 225 379 7.73E-61 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL549_RS04695 9e616b2b6fdb76b4c6cfdda96a8ec0c6 179 Pfam PF07152 YaeQ protein 1 170 9.2E-65 T 28-03-2018 IPR009822 YaeQ AL549_RS04695 9e616b2b6fdb76b4c6cfdda96a8ec0c6 179 SMART SM01322 1 174 8.3E-96 T 28-03-2018 IPR009822 YaeQ AL549_RS04695 9e616b2b6fdb76b4c6cfdda96a8ec0c6 179 Gene3D G3DSA:3.10.640.10 1 172 8.8E-63 T 28-03-2018 AL549_RS04695 9e616b2b6fdb76b4c6cfdda96a8ec0c6 179 PIRSF PIRSF011484 1 179 1.8E-61 T 28-03-2018 IPR009822 YaeQ AL549_RS04695 9e616b2b6fdb76b4c6cfdda96a8ec0c6 179 SUPERFAMILY SSF52980 2 178 8.31E-62 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL549_RS15360 e81516aee1e2ee5378203af83aca4cfd 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 1.5E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS15360 e81516aee1e2ee5378203af83aca4cfd 235 Gene3D G3DSA:1.10.10.10 1 76 1.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS15360 e81516aee1e2ee5378203af83aca4cfd 235 SUPERFAMILY SSF46785 3 72 4.55E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS15360 e81516aee1e2ee5378203af83aca4cfd 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.1E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS15360 e81516aee1e2ee5378203af83aca4cfd 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.1E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS15360 e81516aee1e2ee5378203af83aca4cfd 235 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 233 7.1E-91 T 28-03-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 AL549_RS15360 e81516aee1e2ee5378203af83aca4cfd 235 SMART SM00345 9 68 1.3E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS15360 e81516aee1e2ee5378203af83aca4cfd 235 SMART SM00866 91 228 5.3E-32 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL549_RS15360 e81516aee1e2ee5378203af83aca4cfd 235 Gene3D G3DSA:3.40.1410.10 77 233 7.1E-38 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL549_RS15360 e81516aee1e2ee5378203af83aca4cfd 235 Pfam PF07702 UTRA domain 92 228 4.7E-35 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL549_RS15360 e81516aee1e2ee5378203af83aca4cfd 235 SUPERFAMILY SSF64288 95 231 4.71E-39 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL549_RS08875 4852162f490058f4b291b0c98bb2f9a3 154 SUPERFAMILY SSF55486 5 149 1.42E-48 T 28-03-2018 AL549_RS08875 4852162f490058f4b291b0c98bb2f9a3 154 Gene3D G3DSA:3.40.390.30 1 154 4.0E-53 T 28-03-2018 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 AL549_RS08875 4852162f490058f4b291b0c98bb2f9a3 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 28-03-2018 IPR020549 Endoribonuclease YbeY, conserved site AL549_RS08875 4852162f490058f4b291b0c98bb2f9a3 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.029 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AL549_RS08875 4852162f490058f4b291b0c98bb2f9a3 154 Pfam PF02130 Uncharacterized protein family UPF0054 21 142 2.5E-38 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AL549_RS08875 4852162f490058f4b291b0c98bb2f9a3 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 1.3E-37 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AL549_RS05510 9ba22c1447b4f699d3e13bbb722e30de 362 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 324 2.2E-112 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL549_RS05510 9ba22c1447b4f699d3e13bbb722e30de 362 SUPERFAMILY SSF53901 7 325 3.07E-63 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS05510 9ba22c1447b4f699d3e13bbb722e30de 362 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 6.6E-28 T 28-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL549_RS05510 9ba22c1447b4f699d3e13bbb722e30de 362 Gene3D G3DSA:3.40.47.10 163 332 5.0E-39 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS05510 9ba22c1447b4f699d3e13bbb722e30de 362 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 2.6E-36 T 28-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL549_RS05510 9ba22c1447b4f699d3e13bbb722e30de 362 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 67.124 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL549_RS05510 9ba22c1447b4f699d3e13bbb722e30de 362 Gene3D G3DSA:3.40.47.10 5 162 5.8E-38 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS01445 980515872ab19c807a3da0b78cca80c0 293 SUPERFAMILY SSF161098 25 293 1.06E-61 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS01445 980515872ab19c807a3da0b78cca80c0 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 276 3.4E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS01445 980515872ab19c807a3da0b78cca80c0 293 Gene3D G3DSA:1.10.3720.10 21 280 8.7E-37 T 28-03-2018 AL549_RS11060 f2a596f0f7e452af336436f8338d5150 187 Pfam PF16036 Chalcone isomerase-like 49 184 7.0E-8 T 28-03-2018 IPR016087 Chalcone isomerase GO:0016872 AL549_RS11060 f2a596f0f7e452af336436f8338d5150 187 Gene3D G3DSA:3.50.70.10 27 168 6.5E-11 T 28-03-2018 IPR016088 Chalcone isomerase, 3-layer sandwich GO:0009813|GO:0045430 AL549_RS01060 f21ef04bb04903d764e7b9cff701bbe2 280 Gene3D G3DSA:3.40.190.10 46 267 7.9E-5 T 28-03-2018 AL549_RS01630 685915dc0d2cf735433ce13d966743b9 149 SUPERFAMILY SSF110087 3 141 1.07E-45 T 28-03-2018 IPR007410 Copper chaperone PCuAC AL549_RS01630 685915dc0d2cf735433ce13d966743b9 149 Pfam PF04314 Copper chaperone PCu(A)C 26 132 2.9E-37 T 28-03-2018 IPR007410 Copper chaperone PCuAC AL549_RS21410 09a6f2a81f2731ce524d3cfff75aef20 680 Gene3D G3DSA:1.20.1050.40 5 138 8.4E-40 T 28-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal AL549_RS21410 09a6f2a81f2731ce524d3cfff75aef20 680 Pfam PF01432 Peptidase family M3 222 677 4.4E-162 T 28-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AL549_RS21410 09a6f2a81f2731ce524d3cfff75aef20 680 SUPERFAMILY SSF55486 1 677 6.96E-212 T 28-03-2018 AL549_RS21410 09a6f2a81f2731ce524d3cfff75aef20 680 Gene3D G3DSA:1.10.1370.10 140 444 4.8E-58 T 28-03-2018 AL549_RS21410 09a6f2a81f2731ce524d3cfff75aef20 680 Gene3D G3DSA:1.10.1370.10 457 680 2.0E-67 T 28-03-2018 AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 SUPERFAMILY SSF82693 46 137 2.14E-18 T 28-03-2018 AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 Gene3D G3DSA:3.30.2090.10 181 270 6.3E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 SUPERFAMILY SSF82714 185 266 6.15E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 Gene3D G3DSA:3.30.70.1430 562 659 2.5E-8 T 28-03-2018 AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 SUPERFAMILY SSF82866 791 1019 1.44E-50 T 28-03-2018 AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 Gene3D G3DSA:3.30.70.1430 46 146 1.1E-20 T 28-03-2018 AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 SUPERFAMILY SSF82714 719 793 3.27E-7 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 SUPERFAMILY SSF82866 293 488 9.81E-36 T 28-03-2018 AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 PRINTS PR00702 Acriflavin resistance protein family signature 16 40 1.6E-23 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 PRINTS PR00702 Acriflavin resistance protein family signature 44 62 1.6E-23 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.6E-23 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.6E-23 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.6E-23 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.6E-23 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 Gene3D G3DSA:1.20.1640.10 808 1018 4.3E-43 T 28-03-2018 AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 Gene3D G3DSA:1.20.1640.10 281 490 7.6E-33 T 28-03-2018 AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 Pfam PF00873 AcrB/AcrD/AcrF family 10 1016 1.1E-161 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 Gene3D G3DSA:3.30.2090.10 718 795 2.6E-8 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 SUPERFAMILY SSF82693 269 325 1.36E-8 T 28-03-2018 AL549_RS03140 87604fa3d98592e705ef09d3d1b02e44 1045 SUPERFAMILY SSF82693 146 183 1.36E-8 T 28-03-2018 AL549_RS03100 5ad5bd1dfc3f637bb98630a08d584471 516 SUPERFAMILY SSF48173 230 499 4.19E-63 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL549_RS03100 5ad5bd1dfc3f637bb98630a08d584471 516 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 224 1.6E-69 T 28-03-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein AL549_RS03100 5ad5bd1dfc3f637bb98630a08d584471 516 Gene3D G3DSA:1.25.40.80 132 324 4.8E-41 T 28-03-2018 AL549_RS03100 5ad5bd1dfc3f637bb98630a08d584471 516 Gene3D G3DSA:1.10.579.10 325 504 2.4E-27 T 28-03-2018 AL549_RS01490 31b26b5e1d0045e3f83455bc3d5f21cd 446 SUPERFAMILY SSF55874 300 442 3.54E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS01490 31b26b5e1d0045e3f83455bc3d5f21cd 446 SUPERFAMILY SSF47384 211 292 3.53E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS01490 31b26b5e1d0045e3f83455bc3d5f21cd 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 230 292 1.3E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS01490 31b26b5e1d0045e3f83455bc3d5f21cd 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 401 7.9E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS01490 31b26b5e1d0045e3f83455bc3d5f21cd 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 423 7.9E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS01490 31b26b5e1d0045e3f83455bc3d5f21cd 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 387 7.9E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS01490 31b26b5e1d0045e3f83455bc3d5f21cd 446 Pfam PF08521 Two-component sensor kinase N-terminal 2 151 1.7E-7 T 28-03-2018 IPR013727 Two-component sensor kinase, N-terminal AL549_RS01490 31b26b5e1d0045e3f83455bc3d5f21cd 446 Gene3D G3DSA:1.20.5.1040 129 175 7.2E-6 T 28-03-2018 AL549_RS01490 31b26b5e1d0045e3f83455bc3d5f21cd 446 Gene3D G3DSA:1.20.5.1040 1 36 0.013 T 28-03-2018 AL549_RS01490 31b26b5e1d0045e3f83455bc3d5f21cd 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 336 438 4.6E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS01490 31b26b5e1d0045e3f83455bc3d5f21cd 446 Gene3D G3DSA:1.10.287.130 218 288 2.4E-12 T 28-03-2018 AL549_RS01490 31b26b5e1d0045e3f83455bc3d5f21cd 446 Gene3D G3DSA:3.30.565.10 289 443 1.3E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS01490 31b26b5e1d0045e3f83455bc3d5f21cd 446 SMART SM00387 336 445 2.2E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS01490 31b26b5e1d0045e3f83455bc3d5f21cd 446 SMART SM00388 228 293 1.0E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS02675 689cd918145778344f4b44eca11ec468 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 283 8.8E-100 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL549_RS02675 689cd918145778344f4b44eca11ec468 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 8.2E-150 T 28-03-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AL549_RS02675 689cd918145778344f4b44eca11ec468 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 1.2E-101 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL549_RS02675 689cd918145778344f4b44eca11ec468 284 PIRSF PIRSF001359 1 284 1.9E-110 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL549_RS02675 689cd918145778344f4b44eca11ec468 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL549_RS02675 689cd918145778344f4b44eca11ec468 284 SUPERFAMILY SSF51569 3 283 6.45E-101 T 28-03-2018 AL549_RS02675 689cd918145778344f4b44eca11ec468 284 Gene3D G3DSA:3.20.20.70 1 284 7.2E-106 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS12005 bdde3859a9b05fc3de8cb66039f23907 476 SUPERFAMILY SSF55811 35 167 8.39E-18 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL549_RS12005 bdde3859a9b05fc3de8cb66039f23907 476 Gene3D G3DSA:3.90.79.10 34 147 1.8E-12 T 28-03-2018 AL549_RS12005 bdde3859a9b05fc3de8cb66039f23907 476 ProSitePatterns PS00893 Nudix box signature. 63 84 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL549_RS12005 bdde3859a9b05fc3de8cb66039f23907 476 Pfam PF01569 PAP2 superfamily 245 358 4.4E-7 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL549_RS12005 bdde3859a9b05fc3de8cb66039f23907 476 Gene3D G3DSA:1.20.144.10 148 367 2.1E-4 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL549_RS12005 bdde3859a9b05fc3de8cb66039f23907 476 SUPERFAMILY SSF48317 188 356 1.31E-6 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL549_RS12005 bdde3859a9b05fc3de8cb66039f23907 476 Pfam PF00293 NUDIX domain 37 155 5.2E-10 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL549_RS00645 778bb78c6ae73d5430e07a5e05b5ae6c 106 Gene3D G3DSA:3.30.110.70 1 105 2.6E-37 T 28-03-2018 IPR035439 Uncharacterised protein family UPF0145/C2CD5 Reactome: R-HSA-1445148 AL549_RS00645 778bb78c6ae73d5430e07a5e05b5ae6c 106 SUPERFAMILY SSF117782 1 106 3.4E-39 T 28-03-2018 IPR002765 Uncharacterised protein family UPF0145 AL549_RS00645 778bb78c6ae73d5430e07a5e05b5ae6c 106 Pfam PF01906 Putative heavy-metal-binding 1 105 8.5E-41 T 28-03-2018 IPR002765 Uncharacterised protein family UPF0145 AL549_RS00645 778bb78c6ae73d5430e07a5e05b5ae6c 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 25.373 T 28-03-2018 IPR002765 Uncharacterised protein family UPF0145 AL549_RS04385 5e72fbea33ecbc99a49e07c017772a6c 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 62 2.0E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS04385 5e72fbea33ecbc99a49e07c017772a6c 295 Gene3D G3DSA:3.40.190.10 177 260 8.5E-15 T 28-03-2018 AL549_RS04385 5e72fbea33ecbc99a49e07c017772a6c 295 SUPERFAMILY SSF53850 89 292 1.25E-27 T 28-03-2018 AL549_RS04385 5e72fbea33ecbc99a49e07c017772a6c 295 Gene3D G3DSA:1.10.10.10 7 87 6.6E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS04385 5e72fbea33ecbc99a49e07c017772a6c 295 Gene3D G3DSA:3.40.190.10 91 176 1.0E-5 T 28-03-2018 AL549_RS04385 5e72fbea33ecbc99a49e07c017772a6c 295 SUPERFAMILY SSF46785 9 88 5.99E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS04385 5e72fbea33ecbc99a49e07c017772a6c 295 Pfam PF03466 LysR substrate binding domain 88 289 4.0E-26 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS04385 5e72fbea33ecbc99a49e07c017772a6c 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS04385 5e72fbea33ecbc99a49e07c017772a6c 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS04385 5e72fbea33ecbc99a49e07c017772a6c 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS11190 93ec255dbf4b72b88697c49b6aa430c0 291 Gene3D G3DSA:3.40.190.10 179 257 1.2E-6 T 28-03-2018 AL549_RS11190 93ec255dbf4b72b88697c49b6aa430c0 291 SUPERFAMILY SSF46785 3 84 1.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS11190 93ec255dbf4b72b88697c49b6aa430c0 291 Gene3D G3DSA:1.10.10.10 1 84 2.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS11190 93ec255dbf4b72b88697c49b6aa430c0 291 SUPERFAMILY SSF53850 92 290 4.94E-24 T 28-03-2018 AL549_RS11190 93ec255dbf4b72b88697c49b6aa430c0 291 Pfam PF03466 LysR substrate binding domain 92 257 1.0E-17 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS11190 93ec255dbf4b72b88697c49b6aa430c0 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 60 6.0E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS11190 93ec255dbf4b72b88697c49b6aa430c0 291 Gene3D G3DSA:3.40.190.10 89 178 3.2E-9 T 28-03-2018 AL549_RS15330 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.1900.20 55 116 4.1E-29 T 28-03-2018 IPR035566 Ribosomal protein L20 C-terminal domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS15330 070ac683e597a207494e9cfb26acddbf 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.5E-52 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS15330 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS15330 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS15330 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS15330 070ac683e597a207494e9cfb26acddbf 117 SUPERFAMILY SSF74731 2 116 5.62E-50 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS15330 070ac683e597a207494e9cfb26acddbf 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-22 T 28-03-2018 AL549_RS15330 070ac683e597a207494e9cfb26acddbf 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.596 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS15330 070ac683e597a207494e9cfb26acddbf 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS15330 070ac683e597a207494e9cfb26acddbf 117 Pfam PF00453 Ribosomal protein L20 3 108 9.9E-49 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS07540 58b689758e8ff2c4ed708d54a6286026 397 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 338 362 - T 28-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 AL549_RS07540 58b689758e8ff2c4ed708d54a6286026 397 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 23 379 4.2E-129 T 28-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 AL549_RS07540 58b689758e8ff2c4ed708d54a6286026 397 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 21 390 41.606 T 28-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 AL549_RS07540 58b689758e8ff2c4ed708d54a6286026 397 Pfam PF01098 Cell cycle protein 26 380 5.3E-114 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 AL549_RS06860 f66cae9fa03653c37d91577e77181e4a 450 SUPERFAMILY SSF53067 85 205 3.56E-26 T 28-03-2018 AL549_RS06860 f66cae9fa03653c37d91577e77181e4a 450 SUPERFAMILY SSF53067 1 44 3.56E-26 T 28-03-2018 AL549_RS06860 f66cae9fa03653c37d91577e77181e4a 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL549_RS06860 f66cae9fa03653c37d91577e77181e4a 450 Pfam PF00012 Hsp70 protein 129 259 6.2E-12 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS06860 f66cae9fa03653c37d91577e77181e4a 450 Pfam PF00012 Hsp70 protein 336 440 9.3E-5 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS06860 f66cae9fa03653c37d91577e77181e4a 450 Gene3D G3DSA:3.30.420.40 218 429 2.3E-32 T 28-03-2018 AL549_RS06860 f66cae9fa03653c37d91577e77181e4a 450 SUPERFAMILY SSF53067 208 276 4.26E-34 T 28-03-2018 AL549_RS06860 f66cae9fa03653c37d91577e77181e4a 450 SUPERFAMILY SSF53067 328 447 4.26E-34 T 28-03-2018 AL549_RS06860 f66cae9fa03653c37d91577e77181e4a 450 Gene3D G3DSA:3.30.420.40 1 217 5.2E-35 T 28-03-2018 AL549_RS08245 340efeeffdd689910442cff9d6831c34 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 4.0E-41 T 28-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL549_RS08245 340efeeffdd689910442cff9d6831c34 171 SUPERFAMILY SSF46565 1 73 2.36E-17 T 28-03-2018 IPR001623 DnaJ domain AL549_RS08245 340efeeffdd689910442cff9d6831c34 171 Gene3D G3DSA:1.20.1280.20 80 169 2.1E-27 T 28-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL549_RS08245 340efeeffdd689910442cff9d6831c34 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.414 T 28-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL549_RS08245 340efeeffdd689910442cff9d6831c34 171 SUPERFAMILY SSF47144 78 170 4.05E-25 T 28-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL549_RS08245 340efeeffdd689910442cff9d6831c34 171 Gene3D G3DSA:1.10.287.110 1 78 1.1E-10 T 28-03-2018 IPR001623 DnaJ domain AL549_RS08245 340efeeffdd689910442cff9d6831c34 171 SMART SM00271 1 66 2.6E-8 T 28-03-2018 IPR001623 DnaJ domain AL549_RS08245 340efeeffdd689910442cff9d6831c34 171 Pfam PF00226 DnaJ domain 2 70 2.9E-7 T 28-03-2018 IPR001623 DnaJ domain AL549_RS08245 340efeeffdd689910442cff9d6831c34 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 5.1E-20 T 28-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL549_RS16560 b86864973bf005be0320641c1b3eb81b 445 SUPERFAMILY SSF46785 13 123 1.22E-45 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS16560 b86864973bf005be0320641c1b3eb81b 445 Pfam PF03882 MukF winged-helix domain 10 122 1.5E-54 T 28-03-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain AL549_RS16560 b86864973bf005be0320641c1b3eb81b 445 SUPERFAMILY SSF140570 124 286 2.35E-76 T 28-03-2018 IPR033440 Chromosome partition protein MukF, middle domain AL549_RS16560 b86864973bf005be0320641c1b3eb81b 445 PIRSF PIRSF018282 1 445 4.1E-255 T 28-03-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 AL549_RS16560 b86864973bf005be0320641c1b3eb81b 445 Gene3D G3DSA:1.20.1170.10 132 379 4.4E-5 T 28-03-2018 AL549_RS16560 b86864973bf005be0320641c1b3eb81b 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 56.436 T 28-03-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 AL549_RS16560 b86864973bf005be0320641c1b3eb81b 445 Pfam PF17193 MukF C-terminal domain 288 445 1.6E-77 T 28-03-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain AL549_RS16560 b86864973bf005be0320641c1b3eb81b 445 Pfam PF17192 MukF middle domain 126 286 2.1E-78 T 28-03-2018 IPR033440 Chromosome partition protein MukF, middle domain AL549_RS16560 b86864973bf005be0320641c1b3eb81b 445 Gene3D G3DSA:1.10.10.10 29 121 5.9E-39 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS19645 21c2105d5bab47f4688b358489b63c5e 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.835 T 28-03-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AL549_RS19645 21c2105d5bab47f4688b358489b63c5e 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL549_RS19645 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 4.8E-55 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL549_RS19645 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.8E-55 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL549_RS19645 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 4.8E-55 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL549_RS19645 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 4.8E-55 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL549_RS19645 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 4.8E-55 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL549_RS19645 21c2105d5bab47f4688b358489b63c5e 502 Gene3D G3DSA:3.40.220.10 1 160 2.3E-31 T 28-03-2018 AL549_RS19645 21c2105d5bab47f4688b358489b63c5e 502 Gene3D G3DSA:3.40.630.10 170 501 3.6E-136 T 28-03-2018 AL549_RS19645 21c2105d5bab47f4688b358489b63c5e 502 SUPERFAMILY SSF52949 1 184 3.47E-52 T 28-03-2018 AL549_RS19645 21c2105d5bab47f4688b358489b63c5e 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 4.2E-34 T 28-03-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL549_RS19645 21c2105d5bab47f4688b358489b63c5e 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 2.6E-124 T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL549_RS19645 21c2105d5bab47f4688b358489b63c5e 502 SUPERFAMILY SSF53187 179 496 8.48E-126 T 28-03-2018 AL549_RS08140 3304f7cc8464b6a76e3c002cb8256858 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 228 2.5E-116 T 28-03-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 AL549_RS08140 3304f7cc8464b6a76e3c002cb8256858 258 PIRSF PIRSF028756 1 258 7.2E-134 T 28-03-2018 IPR016898 Polyphosphate kinase 2 AL549_RS08140 3304f7cc8464b6a76e3c002cb8256858 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 4 228 1.1E-115 T 28-03-2018 IPR022488 Polyphosphate kinase-2-related AL549_RS08140 3304f7cc8464b6a76e3c002cb8256858 258 SUPERFAMILY SSF52540 35 222 8.63E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS08140 3304f7cc8464b6a76e3c002cb8256858 258 Gene3D G3DSA:3.40.50.300 1 251 5.8E-106 T 28-03-2018 AL549_RS11480 7fd54d8023684d4be4135697f1923914 831 Pfam PF00999 Sodium/hydrogen exchanger family 11 426 6.9E-62 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL549_RS11480 7fd54d8023684d4be4135697f1923914 831 Gene3D G3DSA:2.60.120.10 692 829 1.0E-14 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS11480 7fd54d8023684d4be4135697f1923914 831 SUPERFAMILY SSF51206 701 825 7.33E-14 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AL549_RS11480 7fd54d8023684d4be4135697f1923914 831 Pfam PF00027 Cyclic nucleotide-binding domain 727 813 1.0E-6 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL549_RS01600 cc55ec151e442eac3097413e96ffe11f 726 Gene3D G3DSA:3.20.20.80 167 720 1.7E-155 T 28-03-2018 AL549_RS01600 cc55ec151e442eac3097413e96ffe11f 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 8.0E-127 T 28-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AL549_RS01600 cc55ec151e442eac3097413e96ffe11f 726 SUPERFAMILY SSF51445 633 718 1.05E-149 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS01600 cc55ec151e442eac3097413e96ffe11f 726 SUPERFAMILY SSF51445 165 594 1.05E-149 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS01600 cc55ec151e442eac3097413e96ffe11f 726 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 717 1.7E-192 T 28-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AL549_RS18840 a86807fee020cca128793fd97e3bea20 301 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.686 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AL549_RS18840 a86807fee020cca128793fd97e3bea20 301 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 62 6.6E-10 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL549_RS18840 a86807fee020cca128793fd97e3bea20 301 Gene3D G3DSA:3.30.1300.10 177 295 6.1E-28 T 28-03-2018 AL549_RS18840 a86807fee020cca128793fd97e3bea20 301 SUPERFAMILY SSF52374 1 281 2.09E-105 T 28-03-2018 AL549_RS18840 a86807fee020cca128793fd97e3bea20 301 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 3.8E-100 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AL549_RS18840 a86807fee020cca128793fd97e3bea20 301 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 3.3E-104 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AL549_RS18840 a86807fee020cca128793fd97e3bea20 301 Gene3D G3DSA:3.40.50.620 1 176 2.2E-77 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS01185 3f44915a42248d07b4497528c17f5bdb 113 SUPERFAMILY SSF51197 4 101 1.22E-32 T 28-03-2018 AL549_RS01185 3f44915a42248d07b4497528c17f5bdb 113 PIRSF PIRSF020632 3 112 3.1E-66 T 28-03-2018 IPR014510 Tellurite resistance predicted, YeaR AL549_RS01185 3f44915a42248d07b4497528c17f5bdb 113 Pfam PF09313 Domain of unknown function (DUF1971) 14 94 2.4E-27 T 28-03-2018 IPR015392 Domain of unknown function DUF1971 AL549_RS01185 3f44915a42248d07b4497528c17f5bdb 113 Gene3D G3DSA:2.60.120.10 6 107 1.2E-41 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS12675 e6ca1c76f24eb6e400a37ec22970c106 620 Gene3D G3DSA:1.10.287.850 315 398 0.57 T 28-03-2018 AL549_RS12675 e6ca1c76f24eb6e400a37ec22970c106 620 SUPERFAMILY SSF58104 311 620 4.32E-68 T 28-03-2018 AL549_RS12675 e6ca1c76f24eb6e400a37ec22970c106 620 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 432 586 3.4E-37 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS12675 e6ca1c76f24eb6e400a37ec22970c106 620 SMART SM00304 289 343 2.0E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS12675 e6ca1c76f24eb6e400a37ec22970c106 620 Gene3D G3DSA:1.20.1480.30 175 276 0.52 T 28-03-2018 AL549_RS12675 e6ca1c76f24eb6e400a37ec22970c106 620 Pfam PF00672 HAMP domain 289 339 1.7E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS12675 e6ca1c76f24eb6e400a37ec22970c106 620 SMART SM00283 358 619 3.8E-63 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS12675 e6ca1c76f24eb6e400a37ec22970c106 620 Gene3D G3DSA:1.10.287.950 399 620 5.1E-44 T 28-03-2018 AL549_RS12675 e6ca1c76f24eb6e400a37ec22970c106 620 Gene3D G3DSA:1.10.287.1060 69 144 0.14 T 28-03-2018 AL549_RS04920 274a6f8a8a59a5d5bfece830bffd8b5d 322 Pfam PF01012 Electron transfer flavoprotein domain 9 182 5.1E-43 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL549_RS04920 274a6f8a8a59a5d5bfece830bffd8b5d 322 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 266 292 - T 28-03-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 AL549_RS04920 274a6f8a8a59a5d5bfece830bffd8b5d 322 Gene3D G3DSA:3.40.50.1220 198 322 1.5E-61 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL549_RS04920 274a6f8a8a59a5d5bfece830bffd8b5d 322 SUPERFAMILY SSF52402 8 177 1.81E-45 T 28-03-2018 AL549_RS04920 274a6f8a8a59a5d5bfece830bffd8b5d 322 SUPERFAMILY SSF52467 200 321 1.54E-50 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL549_RS04920 274a6f8a8a59a5d5bfece830bffd8b5d 322 SMART SM00893 9 187 3.1E-32 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL549_RS04920 274a6f8a8a59a5d5bfece830bffd8b5d 322 Gene3D G3DSA:3.40.50.620 7 196 3.0E-36 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS04920 274a6f8a8a59a5d5bfece830bffd8b5d 322 PIRSF PIRSF000089 5 322 3.5E-114 T 28-03-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AL549_RS04920 274a6f8a8a59a5d5bfece830bffd8b5d 322 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 203 285 2.6E-37 T 28-03-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AL549_RS20020 cadd320f180779242011210ebfb0d254 550 Gene3D G3DSA:3.40.50.10490 8 139 2.5E-44 T 28-03-2018 AL549_RS20020 cadd320f180779242011210ebfb0d254 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 2.2E-56 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS20020 cadd320f180779242011210ebfb0d254 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 2.2E-56 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS20020 cadd320f180779242011210ebfb0d254 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 2.2E-56 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS20020 cadd320f180779242011210ebfb0d254 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 2.2E-56 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS20020 cadd320f180779242011210ebfb0d254 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 2.2E-56 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS20020 cadd320f180779242011210ebfb0d254 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 2.2E-56 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS20020 cadd320f180779242011210ebfb0d254 550 Pfam PF00342 Phosphoglucose isomerase 53 542 1.6E-254 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS20020 cadd320f180779242011210ebfb0d254 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS20020 cadd320f180779242011210ebfb0d254 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS20020 cadd320f180779242011210ebfb0d254 550 Gene3D G3DSA:3.40.50.10490 260 513 3.1E-127 T 28-03-2018 AL549_RS20020 cadd320f180779242011210ebfb0d254 550 SUPERFAMILY SSF53697 6 548 6.95E-227 T 28-03-2018 AL549_RS20020 cadd320f180779242011210ebfb0d254 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 43.131 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS20020 cadd320f180779242011210ebfb0d254 550 Gene3D G3DSA:1.10.1390.10 514 550 1.0E-20 T 28-03-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS20020 cadd320f180779242011210ebfb0d254 550 Gene3D G3DSA:3.40.50.10490 140 259 3.5E-53 T 28-03-2018 AL549_RS02560 ebc62a1d20fd2ed4586389db689ec854 85 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 4.4E-45 T 28-03-2018 IPR021376 Protein of unknown function DUF2999 AL549_RS18070 a0277555458eb5cd573581727c68f338 193 SUPERFAMILY SSF88697 2 182 4.97E-43 T 28-03-2018 IPR015947 PUA-like domain AL549_RS18070 a0277555458eb5cd573581727c68f338 193 Gene3D G3DSA:2.30.130.40 1 99 1.1E-19 T 28-03-2018 AL549_RS18070 a0277555458eb5cd573581727c68f338 193 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 2 134 4.0E-14 T 28-03-2018 IPR003111 Lon, substrate-binding domain AL549_RS18070 a0277555458eb5cd573581727c68f338 193 Gene3D G3DSA:1.10.4060.10 100 186 2.0E-4 T 28-03-2018 AL549_RS23565 116acb000b7dbd6ca7b4f300e4629987 160 Pfam PF12821 Threonine/Serine exporter, ThrE 16 150 1.5E-36 T 28-03-2018 IPR024528 Threonine/Serine exporter, ThrE AL549_RS08830 99f7f6c02906395741bca88909f0c633 630 SUPERFAMILY SSF56601 256 620 9.09E-95 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL549_RS08830 99f7f6c02906395741bca88909f0c633 630 Gene3D G3DSA:3.40.710.10 252 626 4.6E-85 T 28-03-2018 AL549_RS08830 99f7f6c02906395741bca88909f0c633 630 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 617 4.6E-76 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL549_RS08830 99f7f6c02906395741bca88909f0c633 630 Gene3D G3DSA:3.90.1310.10 35 251 3.6E-55 T 28-03-2018 AL549_RS08830 99f7f6c02906395741bca88909f0c633 630 SUPERFAMILY SSF56519 58 254 9.03E-56 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AL549_RS08830 99f7f6c02906395741bca88909f0c633 630 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 22 620 1.8E-239 T 28-03-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0016020 AL549_RS08830 99f7f6c02906395741bca88909f0c633 630 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 241 1.9E-50 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AL549_RS05975 0c369e360c6879ba9b034cc7eb34dd67 591 SMART SM00471 403 540 1.4E-4 T 28-03-2018 IPR003607 HD/PDEase domain AL549_RS05975 0c369e360c6879ba9b034cc7eb34dd67 591 SUPERFAMILY SSF109604 399 570 3.14E-35 T 28-03-2018 AL549_RS05975 0c369e360c6879ba9b034cc7eb34dd67 591 Gene3D G3DSA:1.10.3210.10 381 590 2.7E-44 T 28-03-2018 AL549_RS05975 0c369e360c6879ba9b034cc7eb34dd67 591 Pfam PF13487 HD domain 458 520 4.1E-13 T 28-03-2018 AL549_RS12430 21022f308529398eebce74b09880079c 80 SUPERFAMILY SSF52833 1 74 9.57E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS12430 21022f308529398eebce74b09880079c 80 Gene3D G3DSA:3.40.30.10 1 73 9.6E-11 T 28-03-2018 AL549_RS12430 21022f308529398eebce74b09880079c 80 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 71 8.3E-22 T 28-03-2018 IPR008554 Glutaredoxin-like AL549_RS01910 d7b07a6d98032c78638c297f1ac36f6e 646 SMART SM00388 244 309 3.9E-27 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS01910 d7b07a6d98032c78638c297f1ac36f6e 646 SUPERFAMILY SSF52172 514 632 7.54E-35 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS01910 d7b07a6d98032c78638c297f1ac36f6e 646 SUPERFAMILY SSF55874 298 470 6.55E-47 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS01910 d7b07a6d98032c78638c297f1ac36f6e 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 469 3.0E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS01910 d7b07a6d98032c78638c297f1ac36f6e 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 425 3.0E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS01910 d7b07a6d98032c78638c297f1ac36f6e 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 3.0E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS01910 d7b07a6d98032c78638c297f1ac36f6e 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 3.0E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS01910 d7b07a6d98032c78638c297f1ac36f6e 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 469 6.6E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS01910 d7b07a6d98032c78638c297f1ac36f6e 646 SMART SM00448 513 627 2.3E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS01910 d7b07a6d98032c78638c297f1ac36f6e 646 Gene3D G3DSA:1.10.287.130 234 305 2.5E-21 T 28-03-2018 AL549_RS01910 d7b07a6d98032c78638c297f1ac36f6e 646 SMART SM00387 356 472 2.0E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS01910 d7b07a6d98032c78638c297f1ac36f6e 646 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 309 3.5E-22 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS01910 d7b07a6d98032c78638c297f1ac36f6e 646 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 40 146 2.3E-16 T 28-03-2018 IPR033414 Periplasmic sensor domain AL549_RS01910 d7b07a6d98032c78638c297f1ac36f6e 646 SUPERFAMILY SSF47384 229 311 3.53E-22 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS01910 d7b07a6d98032c78638c297f1ac36f6e 646 Gene3D G3DSA:3.30.565.10 313 476 2.2E-48 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS01910 d7b07a6d98032c78638c297f1ac36f6e 646 Gene3D G3DSA:3.40.50.2300 500 645 1.2E-36 T 28-03-2018 AL549_RS01910 d7b07a6d98032c78638c297f1ac36f6e 646 Pfam PF00072 Response regulator receiver domain 516 627 9.0E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS17630 2ba9b1ec30eefe28ac1a1112a014e7f0 189 SUPERFAMILY SSF52218 4 186 1.44E-53 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS17630 2ba9b1ec30eefe28ac1a1112a014e7f0 189 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AL549_RS17630 2ba9b1ec30eefe28ac1a1112a014e7f0 189 Pfam PF03358 NADPH-dependent FMN reductase 47 134 1.7E-9 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL549_RS17630 2ba9b1ec30eefe28ac1a1112a014e7f0 189 Gene3D G3DSA:3.40.50.360 2 189 1.4E-40 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS14880 fcaa67aed2c041e2581944ee96578fb0 55 Pfam PF11665 Protein of unknown function (DUF3265) 22 49 6.1E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS21795 a763e3cab7f55bf90a4c7c408c714df7 257 PIRSF PIRSF009320 2 56 2.0E-13 T 28-03-2018 AL549_RS21795 a763e3cab7f55bf90a4c7c408c714df7 257 PIRSF PIRSF009320 88 253 6.8E-9 T 28-03-2018 AL549_RS21795 a763e3cab7f55bf90a4c7c408c714df7 257 Gene3D G3DSA:3.40.50.300 1 255 1.9E-60 T 28-03-2018 AL549_RS21795 a763e3cab7f55bf90a4c7c408c714df7 257 Pfam PF13614 AAA domain 2 178 2.1E-62 T 28-03-2018 IPR025669 AAA domain AL549_RS21795 a763e3cab7f55bf90a4c7c408c714df7 257 SUPERFAMILY SSF52540 2 254 5.57E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS07425 72a7c33597efe7f1a598b7a4d87576b3 149 Pfam PF06295 Protein of unknown function (DUF1043) 6 131 1.2E-45 T 28-03-2018 IPR009386 Protein of unknown function DUF1043 AL549_RS07425 72a7c33597efe7f1a598b7a4d87576b3 149 PIRSF PIRSF006318 1 137 4.3E-51 T 28-03-2018 IPR009386 Protein of unknown function DUF1043 AL549_RS16340 54b36fa6e0965bafe906a4adcdf0c2bf 156 Gene3D G3DSA:3.30.460.10 2 156 6.6E-27 T 28-03-2018 AL549_RS16340 54b36fa6e0965bafe906a4adcdf0c2bf 156 SUPERFAMILY SSF81301 7 155 3.2E-32 T 28-03-2018 AL549_RS16340 54b36fa6e0965bafe906a4adcdf0c2bf 156 Pfam PF04229 GrpB protein 7 155 1.6E-24 T 28-03-2018 IPR007344 GrpB/Dephospho-CoA kinase AL549_RS06745 daa109b968d17dc7959eeb2e0ab93fa6 332 Gene3D G3DSA:3.40.630.10 48 295 6.1E-30 T 28-03-2018 AL549_RS06745 daa109b968d17dc7959eeb2e0ab93fa6 332 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 56 328 9.4E-74 T 28-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL549_RS06745 daa109b968d17dc7959eeb2e0ab93fa6 332 PIRSF PIRSF039012 6 332 4.6E-100 T 28-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL549_RS06745 daa109b968d17dc7959eeb2e0ab93fa6 332 SUPERFAMILY SSF53187 38 330 2.86E-50 T 28-03-2018 AL549_RS00295 540e3bf67f7c2a453956eb7526ec0a7a 267 Pfam PF13411 MerR HTH family regulatory protein 12 79 8.4E-19 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS00295 540e3bf67f7c2a453956eb7526ec0a7a 267 SUPERFAMILY SSF46955 12 105 8.24E-19 T 28-03-2018 IPR009061 Putative DNA-binding domain AL549_RS00295 540e3bf67f7c2a453956eb7526ec0a7a 267 SMART SM00422 12 81 2.5E-17 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS00295 540e3bf67f7c2a453956eb7526ec0a7a 267 Gene3D G3DSA:1.10.1660.10 2 265 8.7E-25 T 28-03-2018 AL549_RS21385 4eb9d13a9fd63977ad43a58a63519ee3 296 SUPERFAMILY SSF103481 35 128 3.92E-5 T 28-03-2018 AL549_RS21385 4eb9d13a9fd63977ad43a58a63519ee3 296 Pfam PF00892 EamA-like transporter family 138 276 1.7E-7 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS21385 4eb9d13a9fd63977ad43a58a63519ee3 296 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 7.4E-74 T 28-03-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 AL549_RS21385 4eb9d13a9fd63977ad43a58a63519ee3 296 SUPERFAMILY SSF103481 181 276 2.62E-5 T 28-03-2018 AL549_RS09380 d92b6f067c5c660fee8a2ef8f3b52063 404 Pfam PF00480 ROK family 86 390 1.4E-77 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AL549_RS09380 d92b6f067c5c660fee8a2ef8f3b52063 404 Gene3D G3DSA:1.10.10.10 14 78 1.6E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS09380 d92b6f067c5c660fee8a2ef8f3b52063 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AL549_RS09380 d92b6f067c5c660fee8a2ef8f3b52063 404 SUPERFAMILY SSF53067 85 391 5.94E-56 T 28-03-2018 AL549_RS09380 d92b6f067c5c660fee8a2ef8f3b52063 404 Gene3D G3DSA:3.30.420.40 79 202 1.2E-22 T 28-03-2018 AL549_RS09380 d92b6f067c5c660fee8a2ef8f3b52063 404 Gene3D G3DSA:3.30.420.40 203 400 2.8E-46 T 28-03-2018 AL549_RS09380 d92b6f067c5c660fee8a2ef8f3b52063 404 SUPERFAMILY SSF46785 11 75 5.96E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03035 27c8991086dffd07a618cd48c6c8ec18 150 Gene3D G3DSA:3.30.420.130 1 117 2.4E-15 T 28-03-2018 AL549_RS03035 27c8991086dffd07a618cd48c6c8ec18 150 SUPERFAMILY SSF53146 2 117 5.76E-20 T 28-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis AL549_RS03035 27c8991086dffd07a618cd48c6c8ec18 150 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 8 98 2.3E-14 T 28-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis AL549_RS20510 24d566444fb479f47ebd36218f7b24af 572 SUPERFAMILY SSF53187 168 264 8.79E-52 T 28-03-2018 AL549_RS20510 24d566444fb479f47ebd36218f7b24af 572 SUPERFAMILY SSF53187 315 391 8.79E-52 T 28-03-2018 AL549_RS20510 24d566444fb479f47ebd36218f7b24af 572 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 170 388 9.8E-49 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AL549_RS20510 24d566444fb479f47ebd36218f7b24af 572 Pfam PF11741 AMIN domain 33 135 8.7E-16 T 28-03-2018 IPR021731 AMIN domain AL549_RS20510 24d566444fb479f47ebd36218f7b24af 572 Gene3D G3DSA:3.10.350.10 526 572 4.6E-14 T 28-03-2018 AL549_RS20510 24d566444fb479f47ebd36218f7b24af 572 Gene3D G3DSA:3.10.350.10 470 525 5.8E-11 T 28-03-2018 AL549_RS20510 24d566444fb479f47ebd36218f7b24af 572 Gene3D G3DSA:3.10.350.10 402 469 1.1E-13 T 28-03-2018 AL549_RS20510 24d566444fb479f47ebd36218f7b24af 572 SUPERFAMILY SSF54106 472 518 5.62E-9 T 28-03-2018 IPR018392 LysM domain AL549_RS20510 24d566444fb479f47ebd36218f7b24af 572 SUPERFAMILY SSF54106 527 570 1.96E-10 T 28-03-2018 IPR018392 LysM domain AL549_RS20510 24d566444fb479f47ebd36218f7b24af 572 Pfam PF01476 LysM domain 475 516 2.7E-10 T 28-03-2018 IPR018392 LysM domain AL549_RS20510 24d566444fb479f47ebd36218f7b24af 572 Pfam PF01476 LysM domain 528 570 4.9E-14 T 28-03-2018 IPR018392 LysM domain AL549_RS20510 24d566444fb479f47ebd36218f7b24af 572 Pfam PF01476 LysM domain 410 451 6.0E-13 T 28-03-2018 IPR018392 LysM domain AL549_RS20510 24d566444fb479f47ebd36218f7b24af 572 SMART SM00646 230 388 7.4E-61 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AL549_RS20510 24d566444fb479f47ebd36218f7b24af 572 Gene3D G3DSA:3.40.630.40 165 396 1.1E-53 T 28-03-2018 AL549_RS20510 24d566444fb479f47ebd36218f7b24af 572 SUPERFAMILY SSF54106 408 452 5.49E-10 T 28-03-2018 IPR018392 LysM domain AL549_RS20510 24d566444fb479f47ebd36218f7b24af 572 SMART SM00257 474 517 4.7E-12 T 28-03-2018 IPR018392 LysM domain AL549_RS20510 24d566444fb479f47ebd36218f7b24af 572 SMART SM00257 409 452 1.3E-13 T 28-03-2018 IPR018392 LysM domain AL549_RS20510 24d566444fb479f47ebd36218f7b24af 572 SMART SM00257 527 570 5.6E-15 T 28-03-2018 IPR018392 LysM domain AL549_RS20980 114de7c9edc3e7d440f0c1d6396f4ca9 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 72 122 3.2E-17 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AL549_RS20980 114de7c9edc3e7d440f0c1d6396f4ca9 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 68 122 13.517 T 28-03-2018 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL549_RS20980 114de7c9edc3e7d440f0c1d6396f4ca9 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 72 122 1.5E-20 T 28-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL549_RS20980 114de7c9edc3e7d440f0c1d6396f4ca9 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 28-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL549_RS20980 114de7c9edc3e7d440f0c1d6396f4ca9 126 Gene3D G3DSA:1.20.5.1030 69 120 3.9E-19 T 28-03-2018 AL549_RS20980 114de7c9edc3e7d440f0c1d6396f4ca9 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 6.2E-42 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AL549_RS20980 114de7c9edc3e7d440f0c1d6396f4ca9 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 6.2E-42 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AL549_RS20980 114de7c9edc3e7d440f0c1d6396f4ca9 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 6.2E-42 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AL549_RS20980 114de7c9edc3e7d440f0c1d6396f4ca9 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 6.2E-42 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AL549_RS08115 9cbc2826b753981ffe4f664b273b8532 232 SUPERFAMILY SSF109755 10 226 1.36E-69 T 28-03-2018 AL549_RS08115 9cbc2826b753981ffe4f664b273b8532 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 1.2E-74 T 28-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AL549_RS08115 9cbc2826b753981ffe4f664b273b8532 232 Gene3D G3DSA:1.20.58.220 3 116 1.3E-27 T 28-03-2018 AL549_RS08115 9cbc2826b753981ffe4f664b273b8532 232 PIRSF PIRSF003107 4 223 1.2E-68 T 28-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AL549_RS08115 9cbc2826b753981ffe4f664b273b8532 232 Pfam PF01895 PhoU domain 128 210 3.1E-17 T 28-03-2018 IPR026022 PhoU domain AL549_RS08115 9cbc2826b753981ffe4f664b273b8532 232 Pfam PF01895 PhoU domain 23 108 3.5E-21 T 28-03-2018 IPR026022 PhoU domain AL549_RS08115 9cbc2826b753981ffe4f664b273b8532 232 Gene3D G3DSA:1.20.58.220 117 228 3.6E-28 T 28-03-2018 AL549_RS12750 bd2c8746b69aa2a2b9d9423a9a74a697 675 Gene3D G3DSA:1.10.287.950 428 637 1.3E-45 T 28-03-2018 AL549_RS12750 bd2c8746b69aa2a2b9d9423a9a74a697 675 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 491 638 3.6E-36 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS12750 bd2c8746b69aa2a2b9d9423a9a74a697 675 SMART SM00283 412 673 1.6E-42 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS12750 bd2c8746b69aa2a2b9d9423a9a74a697 675 SUPERFAMILY SSF58104 372 673 5.23E-57 T 28-03-2018 AL549_RS10370 5c6e1fd875a13ca307366aae4baf6062 337 Gene3D G3DSA:3.40.50.300 12 337 4.4E-81 T 28-03-2018 AL549_RS10370 5c6e1fd875a13ca307366aae4baf6062 337 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS10370 5c6e1fd875a13ca307366aae4baf6062 337 Pfam PF00005 ABC transporter 45 196 9.4E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS10370 5c6e1fd875a13ca307366aae4baf6062 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 315 1.0E-19 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS10370 5c6e1fd875a13ca307366aae4baf6062 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 247 333 2.6E-26 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS10370 5c6e1fd875a13ca307366aae4baf6062 337 SMART SM00382 53 246 3.0E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS10370 5c6e1fd875a13ca307366aae4baf6062 337 SUPERFAMILY SSF52540 16 268 4.71E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 SUPERFAMILY SSF81923 4 156 4.05E-42 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 335 3.2E-13 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 Gene3D G3DSA:1.10.1780.10 1 151 1.2E-32 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 SMART SM00382 198 344 3.2E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 SMART SM00382 597 748 2.1E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 2.2E-11 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.5E-13 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 Gene3D G3DSA:1.10.8.60 766 857 4.4E-23 T 28-03-2018 AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 Gene3D G3DSA:1.10.8.60 343 547 1.5E-43 T 28-03-2018 AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 SUPERFAMILY SSF52540 546 854 5.1E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 28-03-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 SUPERFAMILY SSF52540 159 545 1.78E-100 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 Gene3D G3DSA:3.40.50.300 157 342 5.3E-26 T 28-03-2018 AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 Gene3D G3DSA:3.40.50.300 552 765 3.0E-54 T 28-03-2018 AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 4.8E-26 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 4.0E-57 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL549_RS08020 064d8eabddf6ce04b45a98e2f41508c8 857 SMART SM01086 766 855 4.4E-36 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL549_RS12020 c9017545ec5fc08ca5e99548b2fb7ceb 244 PIRSF PIRSF000370 22 244 2.3E-69 T 28-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AL549_RS12020 c9017545ec5fc08ca5e99548b2fb7ceb 244 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 30 243 2.8E-110 T 28-03-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AL549_RS12020 c9017545ec5fc08ca5e99548b2fb7ceb 244 Pfam PF04055 Radical SAM superfamily 47 144 3.1E-8 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS12020 c9017545ec5fc08ca5e99548b2fb7ceb 244 Gene3D G3DSA:3.20.20.70 49 221 1.0E-13 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS12020 c9017545ec5fc08ca5e99548b2fb7ceb 244 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 24 244 33.502 T 28-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AL549_RS12020 c9017545ec5fc08ca5e99548b2fb7ceb 244 SUPERFAMILY SSF102114 47 142 9.94E-7 T 28-03-2018 AL549_RS12020 c9017545ec5fc08ca5e99548b2fb7ceb 244 Pfam PF13394 4Fe-4S single cluster domain 45 157 1.0E-10 T 28-03-2018 AL549_RS11690 1371e4ecbad469bdeb3e7f3834fa404a 412 SUPERFAMILY SSF55486 47 221 7.6E-8 T 28-03-2018 AL549_RS11690 1371e4ecbad469bdeb3e7f3834fa404a 412 Gene3D G3DSA:3.40.390.10 25 228 3.2E-7 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AL549_RS11690 1371e4ecbad469bdeb3e7f3834fa404a 412 SUPERFAMILY SSF141072 253 348 5.36E-5 T 28-03-2018 AL549_RS11690 1371e4ecbad469bdeb3e7f3834fa404a 412 Pfam PF13688 Metallo-peptidase family M12 52 215 3.1E-8 T 28-03-2018 AL549_RS22520 1fd3b972a35cce53390c1c261cb1c841 399 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 397 1.4E-98 T 28-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AL549_RS22520 1fd3b972a35cce53390c1c261cb1c841 399 Pfam PF12693 GspL periplasmic domain 241 398 1.8E-53 T 28-03-2018 IPR025691 GspL periplasmic domain AL549_RS22520 1fd3b972a35cce53390c1c261cb1c841 399 PIRSF PIRSF015761 17 398 2.2E-31 T 28-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AL549_RS22520 1fd3b972a35cce53390c1c261cb1c841 399 SUPERFAMILY SSF53067 2 144 1.29E-43 T 28-03-2018 AL549_RS22520 1fd3b972a35cce53390c1c261cb1c841 399 Pfam PF05134 Type II secretion system (T2SS), protein L 5 236 1.4E-76 T 28-03-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain AL549_RS22520 1fd3b972a35cce53390c1c261cb1c841 399 SUPERFAMILY SSF53067 146 234 5.7E-22 T 28-03-2018 AL549_RS12360 24f5b5f8812db83b6f36bcd349b6a2c9 472 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 419 467 5.9E-11 T 28-03-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS12360 24f5b5f8812db83b6f36bcd349b6a2c9 472 SUPERFAMILY SSF53335 6 308 1.74E-61 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS12360 24f5b5f8812db83b6f36bcd349b6a2c9 472 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 472 66.794 T 28-03-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS12360 24f5b5f8812db83b6f36bcd349b6a2c9 472 Gene3D G3DSA:3.30.70.1170 28 98 1.7E-21 T 28-03-2018 AL549_RS12360 24f5b5f8812db83b6f36bcd349b6a2c9 472 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 3.7E-29 T 28-03-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 AL549_RS12360 24f5b5f8812db83b6f36bcd349b6a2c9 472 Gene3D G3DSA:3.40.50.150 99 317 7.1E-56 T 28-03-2018 AL549_RS12360 24f5b5f8812db83b6f36bcd349b6a2c9 472 Pfam PF01189 16S rRNA methyltransferase RsmB/F 111 306 2.8E-48 T 28-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS12360 24f5b5f8812db83b6f36bcd349b6a2c9 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 187 199 2.9E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS12360 24f5b5f8812db83b6f36bcd349b6a2c9 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 253 2.9E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS12360 24f5b5f8812db83b6f36bcd349b6a2c9 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 308 2.9E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS12360 24f5b5f8812db83b6f36bcd349b6a2c9 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 120 130 2.9E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS12360 24f5b5f8812db83b6f36bcd349b6a2c9 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 2.9E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS12360 24f5b5f8812db83b6f36bcd349b6a2c9 472 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 186 197 - T 28-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS12360 24f5b5f8812db83b6f36bcd349b6a2c9 472 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 308 3.3E-100 T 28-03-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 AL549_RS00210 9b7805dbff2491fb06cc83fb50688d2e 543 Pfam PF13584 Oxygen tolerance 15 467 9.4E-80 T 28-03-2018 IPR025738 Aerotolerance-related protein BatD AL549_RS04835 3887530e927f895d03be764088da8217 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 265 2.1E-59 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL549_RS04835 3887530e927f895d03be764088da8217 265 Gene3D G3DSA:1.10.12.10 226 263 1.7E-18 T 28-03-2018 IPR014748 Crontonase, C-terminal AL549_RS04835 3887530e927f895d03be764088da8217 265 SUPERFAMILY SSF52096 8 264 5.16E-77 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS04835 3887530e927f895d03be764088da8217 265 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AL549_RS04835 3887530e927f895d03be764088da8217 265 Gene3D G3DSA:3.90.226.10 8 225 8.1E-61 T 28-03-2018 AL549_RS19820 b41823e75d742ee16fab9d0f80fa14a4 574 Pfam PF00437 Type II/IV secretion system protein 189 453 8.8E-77 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL549_RS19820 b41823e75d742ee16fab9d0f80fa14a4 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 3.0E-23 T 28-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 AL549_RS19820 b41823e75d742ee16fab9d0f80fa14a4 574 Gene3D G3DSA:3.30.450.90 147 286 7.7E-44 T 28-03-2018 AL549_RS19820 b41823e75d742ee16fab9d0f80fa14a4 574 SMART SM00382 314 435 2.3E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS19820 b41823e75d742ee16fab9d0f80fa14a4 574 SUPERFAMILY SSF160246 3 145 3.92E-39 T 28-03-2018 AL549_RS19820 b41823e75d742ee16fab9d0f80fa14a4 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL549_RS19820 b41823e75d742ee16fab9d0f80fa14a4 574 Gene3D G3DSA:3.40.50.300 287 566 5.6E-59 T 28-03-2018 AL549_RS19820 b41823e75d742ee16fab9d0f80fa14a4 574 SUPERFAMILY SSF52540 170 559 4.14E-92 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS05475 2f1aef9530974128d341f13aa15e6e96 538 Gene3D G3DSA:1.10.287.950 207 305 0.0012 T 28-03-2018 AL549_RS05475 2f1aef9530974128d341f13aa15e6e96 538 SMART SM00283 276 537 1.6E-59 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS05475 2f1aef9530974128d341f13aa15e6e96 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 501 2.3E-40 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS05475 2f1aef9530974128d341f13aa15e6e96 538 SMART SM00304 209 261 1.5E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS05475 2f1aef9530974128d341f13aa15e6e96 538 Gene3D G3DSA:3.30.450.20 26 190 1.0E-42 T 28-03-2018 AL549_RS05475 2f1aef9530974128d341f13aa15e6e96 538 Gene3D G3DSA:1.10.287.950 306 538 1.3E-44 T 28-03-2018 AL549_RS05475 2f1aef9530974128d341f13aa15e6e96 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 304 333 1.7E-7 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS05475 2f1aef9530974128d341f13aa15e6e96 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 403 432 1.7E-7 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS05475 2f1aef9530974128d341f13aa15e6e96 538 SUPERFAMILY SSF58104 229 538 9.55E-68 T 28-03-2018 AL549_RS05475 2f1aef9530974128d341f13aa15e6e96 538 SMART SM01049 35 127 5.9E-31 T 28-03-2018 IPR033480 Single Cache domain 2 AL549_RS05475 2f1aef9530974128d341f13aa15e6e96 538 Pfam PF17200 Single Cache domain 2 41 183 2.0E-39 T 28-03-2018 IPR033480 Single Cache domain 2 AL549_RS05475 2f1aef9530974128d341f13aa15e6e96 538 Pfam PF00672 HAMP domain 211 257 2.5E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS21250 14c90162c748c860b5f40340ba81c477 169 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 20 133 2.1E-8 T 28-03-2018 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL549_RS21250 14c90162c748c860b5f40340ba81c477 169 SMART SM00404 72 168 0.0038 T 28-03-2018 IPR003595 Protein-tyrosine phosphatase, catalytic AL549_RS21250 14c90162c748c860b5f40340ba81c477 169 SUPERFAMILY SSF52799 17 164 8.16E-30 T 28-03-2018 IPR029021 Protein-tyrosine phosphatase-like AL549_RS21250 14c90162c748c860b5f40340ba81c477 169 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 114 124 - T 28-03-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 AL549_RS21250 14c90162c748c860b5f40340ba81c477 169 Gene3D G3DSA:3.90.190.10 24 169 4.5E-18 T 28-03-2018 IPR029021 Protein-tyrosine phosphatase-like AL549_RS06080 2ff311f96495fbec266d4d6d10ffcbc0 575 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 4.9E-15 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS06080 2ff311f96495fbec266d4d6d10ffcbc0 575 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 122 204 6.6E-16 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS06080 2ff311f96495fbec266d4d6d10ffcbc0 575 SUPERFAMILY SSF52794 119 220 3.14E-36 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS06080 2ff311f96495fbec266d4d6d10ffcbc0 575 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 121 204 6.0E-36 T 28-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AL549_RS06080 2ff311f96495fbec266d4d6d10ffcbc0 575 SUPERFAMILY SSF52794 2 102 6.45E-29 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS06080 2ff311f96495fbec266d4d6d10ffcbc0 575 Gene3D G3DSA:3.40.50.2300 119 216 4.5E-38 T 28-03-2018 AL549_RS06080 2ff311f96495fbec266d4d6d10ffcbc0 575 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 225 564 4.5E-140 T 28-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AL549_RS06080 2ff311f96495fbec266d4d6d10ffcbc0 575 Pfam PF02378 Phosphotransferase system, EIIC 245 508 2.0E-14 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL549_RS06080 2ff311f96495fbec266d4d6d10ffcbc0 575 Gene3D G3DSA:3.40.50.2300 2 100 7.1E-28 T 28-03-2018 AL549_RS17820 7f29ecb959d37b1eed695b52f253fc42 251 SUPERFAMILY SSF64005 8 233 5.36E-89 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL549_RS17820 7f29ecb959d37b1eed695b52f253fc42 251 Gene3D G3DSA:3.40.1180.10 1 241 9.5E-93 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL549_RS17820 7f29ecb959d37b1eed695b52f253fc42 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 1.5E-80 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL549_RS17820 7f29ecb959d37b1eed695b52f253fc42 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 28-03-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199 AL549_RS17820 7f29ecb959d37b1eed695b52f253fc42 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.418 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL549_RS17820 7f29ecb959d37b1eed695b52f253fc42 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 1.4E-92 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL549_RS18765 028b76a7df8b0bd8cb965de1d95f642e 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-43 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL549_RS18765 028b76a7df8b0bd8cb965de1d95f642e 112 SUPERFAMILY SSF54913 1 112 2.83E-45 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL549_RS18765 028b76a7df8b0bd8cb965de1d95f642e 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 28-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AL549_RS18765 028b76a7df8b0bd8cb965de1d95f642e 112 SMART SM00938 4 105 2.7E-68 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL549_RS18765 028b76a7df8b0bd8cb965de1d95f642e 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 28-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AL549_RS18765 028b76a7df8b0bd8cb965de1d95f642e 112 PRINTS PR00340 P-II protein signature 23 41 9.0E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL549_RS18765 028b76a7df8b0bd8cb965de1d95f642e 112 PRINTS PR00340 P-II protein signature 52 75 9.0E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL549_RS18765 028b76a7df8b0bd8cb965de1d95f642e 112 PRINTS PR00340 P-II protein signature 2 17 9.0E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL549_RS18765 028b76a7df8b0bd8cb965de1d95f642e 112 PRINTS PR00340 P-II protein signature 83 103 9.0E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL549_RS18765 028b76a7df8b0bd8cb965de1d95f642e 112 PIRSF PIRSF039144 1 112 1.8E-55 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL549_RS18765 028b76a7df8b0bd8cb965de1d95f642e 112 Gene3D G3DSA:3.30.70.120 1 109 1.3E-49 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL549_RS05440 4156e84dca7d98d49c6e06317c01d483 255 Pfam PF11932 Protein of unknown function (DUF3450) 8 247 6.6E-83 T 28-03-2018 IPR016866 Uncharacterised conserved protein UCP028069 AL549_RS05440 4156e84dca7d98d49c6e06317c01d483 255 PIRSF PIRSF028069 1 255 3.2E-101 T 28-03-2018 IPR016866 Uncharacterised conserved protein UCP028069 AL549_RS08285 7c0e5874638b8631bc75e221e2d4d494 372 Gene3D G3DSA:3.20.20.120 17 196 3.5E-19 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL549_RS08285 7c0e5874638b8631bc75e221e2d4d494 372 SUPERFAMILY SSF51717 15 208 3.92E-10 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL549_RS08285 7c0e5874638b8631bc75e221e2d4d494 372 SUPERFAMILY SSF56014 265 354 2.28E-11 T 28-03-2018 AL549_RS08285 7c0e5874638b8631bc75e221e2d4d494 372 Pfam PF04551 GcpE protein 14 354 1.3E-132 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL549_RS08285 7c0e5874638b8631bc75e221e2d4d494 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.17 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL549_RS08285 7c0e5874638b8631bc75e221e2d4d494 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 4.8E-127 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL549_RS08285 7c0e5874638b8631bc75e221e2d4d494 372 PIRSF PIRSF004640 1 364 1.2E-147 T 28-03-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL549_RS11630 a8db90322493d4ac9d4b9800f5b5530d 456 Pfam PF00939 Sodium:sulfate symporter transmembrane region 17 456 3.9E-56 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL549_RS11630 a8db90322493d4ac9d4b9800f5b5530d 456 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 39 456 1.6E-109 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL549_RS11630 a8db90322493d4ac9d4b9800f5b5530d 456 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 406 422 - T 28-03-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 AL549_RS05935 8c4b9bd7964d4cc9227ef79085482cd1 179 Gene3D G3DSA:1.20.950.20 1 179 1.0E-35 T 28-03-2018 AL549_RS05935 8c4b9bd7964d4cc9227ef79085482cd1 179 Pfam PF01292 Prokaryotic cytochrome b561 8 176 4.7E-32 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AL549_RS05935 8c4b9bd7964d4cc9227ef79085482cd1 179 SUPERFAMILY SSF81342 3 176 4.55E-38 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL549_RS23700 7a6a5ffc1fa2b260ac529f906f28f4de 382 Gene3D G3DSA:1.10.1040.10 208 382 3.8E-45 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL549_RS23700 7a6a5ffc1fa2b260ac529f906f28f4de 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 374 2.8E-58 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AL549_RS23700 7a6a5ffc1fa2b260ac529f906f28f4de 382 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 7.7E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL549_RS23700 7a6a5ffc1fa2b260ac529f906f28f4de 382 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 7.7E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL549_RS23700 7a6a5ffc1fa2b260ac529f906f28f4de 382 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 7.7E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL549_RS23700 7a6a5ffc1fa2b260ac529f906f28f4de 382 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 7.7E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL549_RS23700 7a6a5ffc1fa2b260ac529f906f28f4de 382 SUPERFAMILY SSF48179 205 382 2.58E-44 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL549_RS23700 7a6a5ffc1fa2b260ac529f906f28f4de 382 SUPERFAMILY SSF51735 3 202 5.69E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS23700 7a6a5ffc1fa2b260ac529f906f28f4de 382 Gene3D G3DSA:3.40.50.720 1 78 5.6E-7 T 28-03-2018 AL549_RS23700 7a6a5ffc1fa2b260ac529f906f28f4de 382 Gene3D G3DSA:3.40.50.720 79 200 2.1E-26 T 28-03-2018 AL549_RS23700 7a6a5ffc1fa2b260ac529f906f28f4de 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 379 40.546 T 28-03-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL549_RS23700 7a6a5ffc1fa2b260ac529f906f28f4de 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 7.9E-23 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AL549_RS23700 7a6a5ffc1fa2b260ac529f906f28f4de 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 28-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL549_RS23275 10108adc99f35542f5493d8de73996a6 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 7.8E-10 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL549_RS23275 10108adc99f35542f5493d8de73996a6 653 SUPERFAMILY SSF56300 23 360 1.12E-86 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS23275 10108adc99f35542f5493d8de73996a6 653 SUPERFAMILY SSF55816 361 603 1.57E-36 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS23275 10108adc99f35542f5493d8de73996a6 653 Gene3D G3DSA:3.60.21.10 21 352 2.5E-79 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS23275 10108adc99f35542f5493d8de73996a6 653 PRINTS PR01607 Apyrase family signature 249 272 4.1E-30 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS23275 10108adc99f35542f5493d8de73996a6 653 PRINTS PR01607 Apyrase family signature 28 46 4.1E-30 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS23275 10108adc99f35542f5493d8de73996a6 653 PRINTS PR01607 Apyrase family signature 221 238 4.1E-30 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS23275 10108adc99f35542f5493d8de73996a6 653 PRINTS PR01607 Apyrase family signature 289 309 4.1E-30 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS23275 10108adc99f35542f5493d8de73996a6 653 PRINTS PR01607 Apyrase family signature 536 555 4.1E-30 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS23275 10108adc99f35542f5493d8de73996a6 653 PRINTS PR01607 Apyrase family signature 434 457 4.1E-30 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS23275 10108adc99f35542f5493d8de73996a6 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 554 1.6E-18 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS23275 10108adc99f35542f5493d8de73996a6 653 Gene3D G3DSA:3.90.780.10 353 611 7.5E-49 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS23275 10108adc99f35542f5493d8de73996a6 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS23275 10108adc99f35542f5493d8de73996a6 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 653 0.0 T 28-03-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 AL549_RS12595 b0f211195fd27356beb4257e3cdf9477 245 Pfam PF02146 Sir2 family 13 186 2.4E-48 T 28-03-2018 IPR003000 Sirtuin family GO:0070403 AL549_RS12595 b0f211195fd27356beb4257e3cdf9477 245 Gene3D G3DSA:3.30.1600.10 32 146 2.6E-30 T 28-03-2018 IPR026591 Sirtuin family, catalytic core small domain AL549_RS12595 b0f211195fd27356beb4257e3cdf9477 245 SUPERFAMILY SSF52467 6 235 1.16E-72 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL549_RS12595 b0f211195fd27356beb4257e3cdf9477 245 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 56.293 T 28-03-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 AL549_RS12595 b0f211195fd27356beb4257e3cdf9477 245 Gene3D G3DSA:3.40.50.1220 5 31 0.15 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL549_RS12595 b0f211195fd27356beb4257e3cdf9477 245 Gene3D G3DSA:3.40.50.1220 147 244 7.7E-17 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL549_RS18715 463ce0d1583e31707b0fb43efa4e2916 331 Pfam PF00005 ABC transporter 35 192 3.2E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS18715 463ce0d1583e31707b0fb43efa4e2916 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 2.0E-23 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS18715 463ce0d1583e31707b0fb43efa4e2916 331 SUPERFAMILY SSF52540 9 262 5.59E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18715 463ce0d1583e31707b0fb43efa4e2916 331 Gene3D G3DSA:3.40.50.300 7 331 8.9E-63 T 28-03-2018 AL549_RS18715 463ce0d1583e31707b0fb43efa4e2916 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 1.5E-17 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS18715 463ce0d1583e31707b0fb43efa4e2916 331 SMART SM00382 43 241 1.2E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS18715 463ce0d1583e31707b0fb43efa4e2916 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS12485 f4e326625d05a54b98478bd447f11514 400 Pfam PF08495 FIST N domain 33 227 4.3E-22 T 28-03-2018 IPR013702 FIST domain, N-terminal AL549_RS12485 f4e326625d05a54b98478bd447f11514 400 Pfam PF10442 FIST C domain 230 375 4.5E-15 T 28-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL549_RS12485 f4e326625d05a54b98478bd447f11514 400 SMART SM00897 29 228 1.9E-34 T 28-03-2018 IPR013702 FIST domain, N-terminal AL549_RS12485 f4e326625d05a54b98478bd447f11514 400 SMART SM01204 229 376 4.7E-28 T 28-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 5.9E-21 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 366 379 5.9E-21 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 5.9E-21 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 267 286 5.9E-21 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 185 198 5.9E-21 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 SUPERFAMILY SSF50621 260 387 1.4E-32 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 Gene3D G3DSA:3.20.20.10 45 267 1.5E-50 T 28-03-2018 IPR029066 PLP-binding barrel AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 SUPERFAMILY SSF51419 41 279 7.98E-60 T 28-03-2018 IPR029066 PLP-binding barrel AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 PRINTS PR01182 Ornithine decarboxylase signature 135 157 8.6E-21 T 28-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 PRINTS PR01182 Ornithine decarboxylase signature 35 59 8.6E-21 T 28-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 PRINTS PR01182 Ornithine decarboxylase signature 61 88 8.6E-21 T 28-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 PRINTS PR01182 Ornithine decarboxylase signature 105 129 8.6E-21 T 28-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 PRINTS PR01182 Ornithine decarboxylase signature 302 315 8.6E-21 T 28-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 PRINTS PR01182 Ornithine decarboxylase signature 353 366 8.6E-21 T 28-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 PRINTS PR01182 Ornithine decarboxylase signature 333 343 8.6E-21 T 28-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 45 277 5.3E-51 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 223 237 - T 28-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 278 366 6.5E-15 T 28-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AL549_RS02610 61092242d558cfca3bc67914bdc5d5fe 399 Gene3D G3DSA:2.40.37.10 268 394 5.6E-34 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL549_RS08980 4310069db47ea0495ebd201acc339cad 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 7.1E-53 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL549_RS08980 4310069db47ea0495ebd201acc339cad 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 28-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AL549_RS08980 4310069db47ea0495ebd201acc339cad 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 6.0E-68 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL549_RS08980 4310069db47ea0495ebd201acc339cad 196 SUPERFAMILY SSF53178 5 194 2.88E-68 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL549_RS08980 4310069db47ea0495ebd201acc339cad 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 28-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AL549_RS08980 4310069db47ea0495ebd201acc339cad 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.571 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL549_RS08980 4310069db47ea0495ebd201acc339cad 196 Gene3D G3DSA:3.40.50.1470 1 196 3.0E-69 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL549_RS17945 9feb8a39adc6985831e625b978b701e1 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 1.5E-25 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL549_RS17945 9feb8a39adc6985831e625b978b701e1 571 SUPERFAMILY SSF55681 407 478 5.94E-97 T 28-03-2018 AL549_RS17945 9feb8a39adc6985831e625b978b701e1 571 SUPERFAMILY SSF55681 10 237 5.94E-97 T 28-03-2018 AL549_RS17945 9feb8a39adc6985831e625b978b701e1 571 PIRSF PIRSF001535 1 571 2.0E-266 T 28-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AL549_RS17945 9feb8a39adc6985831e625b978b701e1 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 2.2E-245 T 28-03-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AL549_RS17945 9feb8a39adc6985831e625b978b701e1 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL549_RS17945 9feb8a39adc6985831e625b978b701e1 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL549_RS17945 9feb8a39adc6985831e625b978b701e1 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL549_RS17945 9feb8a39adc6985831e625b978b701e1 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL549_RS17945 9feb8a39adc6985831e625b978b701e1 571 Gene3D G3DSA:3.40.50.800 480 571 6.9E-28 T 28-03-2018 IPR004154 Anticodon-binding AL549_RS17945 9feb8a39adc6985831e625b978b701e1 571 Pfam PF03129 Anticodon binding domain 475 568 3.4E-22 T 28-03-2018 IPR004154 Anticodon-binding AL549_RS17945 9feb8a39adc6985831e625b978b701e1 571 Gene3D G3DSA:3.30.930.10 1 479 2.9E-99 T 28-03-2018 AL549_RS17945 9feb8a39adc6985831e625b978b701e1 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 5.1E-41 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS17945 9feb8a39adc6985831e625b978b701e1 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.002 T 28-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AL549_RS17945 9feb8a39adc6985831e625b978b701e1 571 SUPERFAMILY SSF52954 463 570 1.39E-33 T 28-03-2018 IPR004154 Anticodon-binding AL549_RS17945 9feb8a39adc6985831e625b978b701e1 571 SUPERFAMILY SSF55826 218 390 3.92E-31 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL549_RS03240 1dc726c2809c4da3e9c39e1c28a8b13c 207 Gene3D G3DSA:3.20.20.70 1 206 5.2E-34 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS03240 1dc726c2809c4da3e9c39e1c28a8b13c 207 Pfam PF01081 KDPG and KHG aldolase 6 197 1.2E-70 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL549_RS03240 1dc726c2809c4da3e9c39e1c28a8b13c 207 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 28-03-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL549_RS03240 1dc726c2809c4da3e9c39e1c28a8b13c 207 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 204 3.9E-82 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL549_RS03240 1dc726c2809c4da3e9c39e1c28a8b13c 207 SUPERFAMILY SSF51569 3 205 6.96E-66 T 28-03-2018 AL549_RS03240 1dc726c2809c4da3e9c39e1c28a8b13c 207 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 28-03-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL549_RS06730 d5703907208b666299392f08b2b7ab05 106 Gene3D G3DSA:1.10.760.10 9 104 2.1E-20 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS06730 d5703907208b666299392f08b2b7ab05 106 SUPERFAMILY SSF46626 20 104 3.25E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS06730 d5703907208b666299392f08b2b7ab05 106 Pfam PF00034 Cytochrome c 35 104 5.3E-7 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS07995 ea7f3d983d648b94cffaf27b815d66d3 392 Gene3D G3DSA:3.40.190.10 117 201 4.6E-30 T 28-03-2018 AL549_RS07995 ea7f3d983d648b94cffaf27b815d66d3 392 Gene3D G3DSA:1.20.59.10 2 116 1.8E-26 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL549_RS07995 ea7f3d983d648b94cffaf27b815d66d3 392 Pfam PF00800 Prephenate dehydratase 110 291 8.4E-58 T 28-03-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL549_RS07995 ea7f3d983d648b94cffaf27b815d66d3 392 SUPERFAMILY SSF48600 7 95 4.4E-19 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL549_RS07995 ea7f3d983d648b94cffaf27b815d66d3 392 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 9 91 1.5E-28 T 28-03-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 AL549_RS07995 ea7f3d983d648b94cffaf27b815d66d3 392 Gene3D G3DSA:3.40.190.10 202 278 3.9E-23 T 28-03-2018 AL549_RS07995 ea7f3d983d648b94cffaf27b815d66d3 392 SUPERFAMILY SSF53850 109 294 1.52E-54 T 28-03-2018 AL549_RS07995 ea7f3d983d648b94cffaf27b815d66d3 392 SMART SM00830 12 93 1.4E-21 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL549_RS07995 ea7f3d983d648b94cffaf27b815d66d3 392 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 265 287 - T 28-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL549_RS07995 ea7f3d983d648b94cffaf27b815d66d3 392 Gene3D G3DSA:3.30.70.260 298 385 1.5E-26 T 28-03-2018 AL549_RS07995 ea7f3d983d648b94cffaf27b815d66d3 392 PIRSF PIRSF001500 1 384 5.0E-141 T 28-03-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL549_RS07995 ea7f3d983d648b94cffaf27b815d66d3 392 Pfam PF01817 Chorismate mutase type II 12 91 8.5E-17 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL549_RS07995 ea7f3d983d648b94cffaf27b815d66d3 392 SUPERFAMILY SSF55021 284 381 1.37E-25 T 28-03-2018 AL549_RS07995 ea7f3d983d648b94cffaf27b815d66d3 392 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 329 336 - T 28-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL549_RS09530 2d96d0b4992375892205412f932d3d6e 75 Gene3D G3DSA:2.30.30.90 1 75 4.3E-20 T 28-03-2018 AL549_RS09530 2d96d0b4992375892205412f932d3d6e 75 SMART SM00899 1 74 5.2E-23 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AL549_RS09530 2d96d0b4992375892205412f932d3d6e 75 Pfam PF04023 FeoA domain 1 73 4.2E-18 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AL549_RS09530 2d96d0b4992375892205412f932d3d6e 75 SUPERFAMILY SSF50037 4 73 4.12E-18 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal AL549_RS06220 87968c9ac2c3d18a6bebd39a3de0f209 356 SMART SM00028 172 205 17.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS06220 87968c9ac2c3d18a6bebd39a3de0f209 356 SMART SM00028 206 239 0.065 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS06220 87968c9ac2c3d18a6bebd39a3de0f209 356 SMART SM00028 240 273 420.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS06220 87968c9ac2c3d18a6bebd39a3de0f209 356 Pfam PF13432 Tetratricopeptide repeat 177 239 2.8E-9 T 28-03-2018 AL549_RS06220 87968c9ac2c3d18a6bebd39a3de0f209 356 Gene3D G3DSA:1.25.40.10 221 300 3.8E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS06220 87968c9ac2c3d18a6bebd39a3de0f209 356 Gene3D G3DSA:1.25.40.10 125 220 8.1E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS06220 87968c9ac2c3d18a6bebd39a3de0f209 356 SUPERFAMILY SSF48452 170 284 4.03E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS06105 d73fefa919335621ac8a8e3935fa3517 241 Gene3D G3DSA:1.10.10.60 55 196 3.7E-6 T 28-03-2018 AL549_RS06105 d73fefa919335621ac8a8e3935fa3517 241 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.3E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS06105 d73fefa919335621ac8a8e3935fa3517 241 SUPERFAMILY SSF46689 9 86 1.69E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS06105 d73fefa919335621ac8a8e3935fa3517 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.1E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS06105 d73fefa919335621ac8a8e3935fa3517 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.1E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS06105 d73fefa919335621ac8a8e3935fa3517 241 Gene3D G3DSA:1.10.10.60 1 54 9.5E-16 T 28-03-2018 AL549_RS21465 1cd96d88e4d6a95db6b956e4adb6e5c0 298 SMART SM00448 1 115 2.9E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS21465 1cd96d88e4d6a95db6b956e4adb6e5c0 298 Pfam PF00072 Response regulator receiver domain 3 115 2.7E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS21465 1cd96d88e4d6a95db6b956e4adb6e5c0 298 SUPERFAMILY SSF52172 2 127 4.41E-30 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS21465 1cd96d88e4d6a95db6b956e4adb6e5c0 298 Gene3D G3DSA:3.40.50.2300 1 254 2.2E-32 T 28-03-2018 AL549_RS03350 8a9054ba00023532752119b451161c42 93 Pfam PF13670 Peptidase propeptide and YPEB domain 8 90 9.0E-24 T 28-03-2018 IPR025711 PepSY domain AL549_RS00790 9c4081ec8c6f85d5052ba2586d0a786b 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 260 2.4E-61 T 28-03-2018 IPR023214 HAD-like domain AL549_RS00790 9c4081ec8c6f85d5052ba2586d0a786b 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 260 1.9E-52 T 28-03-2018 IPR000150 Cof family GO:0016787 AL549_RS00790 9c4081ec8c6f85d5052ba2586d0a786b 267 Gene3D G3DSA:3.40.50.1000 2 267 3.8E-36 T 28-03-2018 IPR023214 HAD-like domain AL549_RS00790 9c4081ec8c6f85d5052ba2586d0a786b 267 SUPERFAMILY SSF56784 3 264 3.01E-68 T 28-03-2018 IPR023214 HAD-like domain AL549_RS00790 9c4081ec8c6f85d5052ba2586d0a786b 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 233 4.6E-21 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AL549_RS21805 3a18077caf83a9474063bc9ef919555f 129 Pfam PF03899 ATP synthase I chain 16 111 2.6E-16 T 28-03-2018 IPR005598 ATP synthase protein I AL549_RS01510 357650f488e686f80b3587471cbeea54 915 Gene3D G3DSA:3.30.830.10 17 245 1.9E-49 T 28-03-2018 AL549_RS01510 357650f488e686f80b3587471cbeea54 915 Pfam PF00675 Insulinase (Peptidase family M16) 49 160 8.4E-25 T 28-03-2018 IPR011765 Peptidase M16, N-terminal AL549_RS01510 357650f488e686f80b3587471cbeea54 915 Gene3D G3DSA:3.30.830.10 486 719 1.4E-17 T 28-03-2018 AL549_RS01510 357650f488e686f80b3587471cbeea54 915 Gene3D G3DSA:3.30.830.10 733 914 1.5E-15 T 28-03-2018 AL549_RS01510 357650f488e686f80b3587471cbeea54 915 SUPERFAMILY SSF63411 758 904 3.14E-13 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL549_RS01510 357650f488e686f80b3587471cbeea54 915 SUPERFAMILY SSF63411 500 718 4.37E-24 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL549_RS01510 357650f488e686f80b3587471cbeea54 915 Gene3D G3DSA:3.30.830.10 254 464 1.1E-11 T 28-03-2018 AL549_RS01510 357650f488e686f80b3587471cbeea54 915 SUPERFAMILY SSF63411 26 237 8.03E-42 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL549_RS01510 357650f488e686f80b3587471cbeea54 915 Pfam PF05193 Peptidase M16 inactive domain 669 847 3.4E-6 T 28-03-2018 IPR007863 Peptidase M16, C-terminal AL549_RS01510 357650f488e686f80b3587471cbeea54 915 Pfam PF05193 Peptidase M16 inactive domain 198 374 2.0E-14 T 28-03-2018 IPR007863 Peptidase M16, C-terminal AL549_RS01510 357650f488e686f80b3587471cbeea54 915 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 60 83 - T 28-03-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AL549_RS16495 4dba129ebf218a24366efe92ad0e6cac 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 1.2E-75 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL549_RS16495 4dba129ebf218a24366efe92ad0e6cac 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.948 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL549_RS16495 4dba129ebf218a24366efe92ad0e6cac 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.9E-63 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL549_RS16495 4dba129ebf218a24366efe92ad0e6cac 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.5E-42 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL549_RS16495 4dba129ebf218a24366efe92ad0e6cac 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.5E-42 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL549_RS16495 4dba129ebf218a24366efe92ad0e6cac 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.5E-42 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL549_RS16495 4dba129ebf218a24366efe92ad0e6cac 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.5E-42 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL549_RS16495 4dba129ebf218a24366efe92ad0e6cac 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.5E-42 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL549_RS16495 4dba129ebf218a24366efe92ad0e6cac 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 28-03-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AL549_RS16495 4dba129ebf218a24366efe92ad0e6cac 173 SUPERFAMILY SSF53098 3 156 5.06E-56 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS16495 4dba129ebf218a24366efe92ad0e6cac 173 Gene3D G3DSA:3.30.420.10 2 159 1.4E-52 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS21755 36d2d124c11e1c31eac96ea0a59feeec 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.466 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL549_RS21755 36d2d124c11e1c31eac96ea0a59feeec 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 104 2.0E-46 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL549_RS21755 36d2d124c11e1c31eac96ea0a59feeec 118 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 28-03-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 AL549_RS21755 36d2d124c11e1c31eac96ea0a59feeec 118 Gene3D G3DSA:3.30.230.10 1 118 1.6E-32 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL549_RS21755 36d2d124c11e1c31eac96ea0a59feeec 118 SUPERFAMILY SSF54211 4 114 6.07E-31 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS21755 36d2d124c11e1c31eac96ea0a59feeec 118 Pfam PF00825 Ribonuclease P 6 112 1.2E-32 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL549_RS21755 36d2d124c11e1c31eac96ea0a59feeec 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 3.4E-28 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL549_RS20440 9f198aa56028a5b4711c6f5e7cb67422 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 5.5E-39 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL549_RS20440 9f198aa56028a5b4711c6f5e7cb67422 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.65 T 28-03-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AL549_RS20440 9f198aa56028a5b4711c6f5e7cb67422 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 8.7E-86 T 28-03-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 AL549_RS20440 9f198aa56028a5b4711c6f5e7cb67422 247 Gene3D G3DSA:3.40.1280.10 77 247 2.6E-49 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL549_RS20440 9f198aa56028a5b4711c6f5e7cb67422 247 SUPERFAMILY SSF75217 69 244 6.21E-48 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AL549_RS20440 9f198aa56028a5b4711c6f5e7cb67422 247 Gene3D G3DSA:3.30.1330.30 1 76 3.2E-17 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like AL549_RS20440 9f198aa56028a5b4711c6f5e7cb67422 247 SMART SM00967 5 81 4.6E-19 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AL549_RS20440 9f198aa56028a5b4711c6f5e7cb67422 247 SUPERFAMILY SSF55315 3 77 2.35E-19 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like AL549_RS20440 9f198aa56028a5b4711c6f5e7cb67422 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 8.2E-19 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AL549_RS06700 044392ae99a2ebb5b51dc4644880a742 145 Pfam PF06127 Protein of unknown function (DUF962) 1 141 1.8E-22 T 28-03-2018 IPR009305 Protein of unknown function DUF962 AL549_RS17955 cd3c02f3b3ceed269196bbae04d93cfa 67 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 7.0E-27 T 28-03-2018 IPR009624 Uncharacterised protein family UPF0253 AL549_RS17955 cd3c02f3b3ceed269196bbae04d93cfa 67 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 1.1E-35 T 28-03-2018 IPR009624 Uncharacterised protein family UPF0253 AL549_RS17955 cd3c02f3b3ceed269196bbae04d93cfa 67 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 67 27.986 T 28-03-2018 IPR009624 Uncharacterised protein family UPF0253 AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.5E-5 T 28-03-2018 AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.5E-5 T 28-03-2018 AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.5E-5 T 28-03-2018 AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 4.8E-11 T 28-03-2018 AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 4.8E-11 T 28-03-2018 AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 4.8E-11 T 28-03-2018 AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 SUPERFAMILY SSF52317 153 377 8.41E-64 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 7.1E-40 T 28-03-2018 AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 7.1E-40 T 28-03-2018 AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 7.1E-40 T 28-03-2018 AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 7.1E-40 T 28-03-2018 AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 7.1E-40 T 28-03-2018 AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 2.2E-149 T 28-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.871 T 28-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 SMART SM01097 3 133 2.1E-93 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 Gene3D G3DSA:3.40.50.880 152 379 1.3E-67 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 Gene3D G3DSA:3.50.30.20 2 151 3.2E-64 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 SUPERFAMILY SSF52021 4 142 9.68E-58 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 3.9E-47 T 28-03-2018 IPR017926 Glutamine amidotransferase AL549_RS07595 3fb8ff16d4cceb550d45d555bf96cba3 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 6.3E-53 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS01375 85de72771cab3f5bfc5942844fd2a630 427 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 62 408 0.0 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AL549_RS01375 85de72771cab3f5bfc5942844fd2a630 427 Pfam PF02264 LamB porin 33 427 4.1E-84 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AL549_RS01375 85de72771cab3f5bfc5942844fd2a630 427 Gene3D G3DSA:2.40.170.10 31 427 1.9E-88 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AL549_RS01375 85de72771cab3f5bfc5942844fd2a630 427 SUPERFAMILY SSF56935 31 427 3.75E-87 T 28-03-2018 AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 6102 6200 1.2E-7 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 6205 6302 1.1E-10 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.120.380 6303 6477 1.5E-20 T 28-03-2018 AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 7402 7491 1.2E-5 T 28-03-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.650 532 573 0.04 T 28-03-2018 AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 7372 7390 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Pfam PF13519 von Willebrand factor type A domain 6935 7050 2.5E-16 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.1310 217 289 2.5E-10 T 28-03-2018 AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.1310 290 373 1.4E-11 T 28-03-2018 AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.1310 457 531 2.5E-10 T 28-03-2018 AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.1310 374 456 1.0E-10 T 28-03-2018 AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.1290 771 878 2.2E-19 T 28-03-2018 AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.1290 671 770 4.8E-12 T 28-03-2018 AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.1290 574 670 4.6E-19 T 28-03-2018 AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.1290 5976 6086 1.7E-11 T 28-03-2018 AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 SUPERFAMILY SSF51120 7270 7471 8.24E-15 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 SUPERFAMILY SSF53300 6931 7114 2.23E-19 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.500.10 6498 6596 1.4E-12 T 28-03-2018 AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 PRINTS PR00313 NodO calcium binding signature 7385 7394 2.1E-6 T 28-03-2018 AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 PRINTS PR00313 NodO calcium binding signature 7376 7384 2.1E-6 T 28-03-2018 AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 PRINTS PR00313 NodO calcium binding signature 7273 7284 2.1E-6 T 28-03-2018 AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 PRINTS PR00313 NodO calcium binding signature 7358 7366 2.1E-6 T 28-03-2018 AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:3.40.50.410 6924 7142 9.0E-25 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 171 216 1.1E-8 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Pfam PF07691 PA14 domain 6398 6471 1.2E-5 T 28-03-2018 IPR011658 PA14 domain AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 2312 2411 0.0014 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 4148 4247 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 3638 3737 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 3128 3227 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 1802 1901 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 2108 2207 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 4658 4757 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 5474 5573 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 2822 2921 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 5678 5777 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 4964 5063 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 5168 5267 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 2618 2717 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 2924 3023 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 2414 2513 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 4352 4451 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 986 1085 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 2006 2105 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 3332 3431 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 1598 1697 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 3536 3635 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 3740 3839 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 5882 5975 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 1190 1289 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 1394 1493 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 3944 4043 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 2210 2309 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 1700 1799 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 5576 5675 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 885 983 4.9E-4 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 3230 3329 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 4556 4655 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 4760 4859 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 3026 3125 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 2516 2615 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 5066 5165 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 5372 5471 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 2720 2819 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 5270 5369 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 4862 4961 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 1496 1595 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 3434 3533 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 5780 5879 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 1904 2003 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 4454 4553 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 1088 1187 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 4250 4349 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 1292 1391 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 3842 3941 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 Gene3D G3DSA:2.60.40.10 4046 4145 0.0023 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 SMART SM00327 6931 7131 5.0E-11 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS12050 2525c1068e7e5305a72575da68521d15 7494 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 7363 7381 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL549_RS22530 66003d73cb6289ae6262765522673fbf 253 Pfam PF01203 Type II secretion system (T2SS), protein N 37 247 4.9E-58 T 28-03-2018 IPR022792 Type II secretion system, protein N AL549_RS16770 12791d5f7b55ff044d4b054ca9e4718d 626 SUPERFAMILY SSF58104 315 625 3.66E-64 T 28-03-2018 AL549_RS16770 12791d5f7b55ff044d4b054ca9e4718d 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 409 591 3.4E-41 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS16770 12791d5f7b55ff044d4b054ca9e4718d 626 Gene3D G3DSA:1.20.58.60 71 267 9.8E-5 T 28-03-2018 AL549_RS16770 12791d5f7b55ff044d4b054ca9e4718d 626 SMART SM00304 295 349 1.3E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS16770 12791d5f7b55ff044d4b054ca9e4718d 626 SMART SM00304 566 622 110.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS16770 12791d5f7b55ff044d4b054ca9e4718d 626 Gene3D G3DSA:1.10.287.950 408 626 3.5E-45 T 28-03-2018 AL549_RS16770 12791d5f7b55ff044d4b054ca9e4718d 626 SMART SM00283 364 618 6.2E-53 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS16770 12791d5f7b55ff044d4b054ca9e4718d 626 Gene3D G3DSA:1.10.287.1060 326 407 4.1E-4 T 28-03-2018 AL549_RS09870 46cac86b2fe00358700a545d4696f081 100 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 38 99 6.9E-27 T 28-03-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AL549_RS09870 46cac86b2fe00358700a545d4696f081 100 Pfam PF12836 Helix-hairpin-helix motif 38 98 2.5E-22 T 28-03-2018 AL549_RS09870 46cac86b2fe00358700a545d4696f081 100 Gene3D G3DSA:1.10.150.20 18 56 1.1E-7 T 28-03-2018 AL549_RS09870 46cac86b2fe00358700a545d4696f081 100 Gene3D G3DSA:1.10.150.310 57 100 5.6E-14 T 28-03-2018 AL549_RS09870 46cac86b2fe00358700a545d4696f081 100 SUPERFAMILY SSF47781 34 98 2.22E-25 T 28-03-2018 IPR010994 RuvA domain 2-like AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 46 325 4.6E-138 T 28-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 PRINTS PR00046 Major sigma-70 factor signature 263 275 6.4E-28 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 PRINTS PR00046 Major sigma-70 factor signature 139 147 6.4E-28 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 PRINTS PR00046 Major sigma-70 factor signature 284 299 6.4E-28 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 PRINTS PR00046 Major sigma-70 factor signature 115 128 6.4E-28 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 PRINTS PR00046 Major sigma-70 factor signature 299 310 6.4E-28 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 Pfam PF04545 Sigma-70, region 4 259 312 1.1E-17 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 87 313 2.0E-36 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 Pfam PF00140 Sigma-70 factor, region 1.2 53 86 4.1E-12 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 Pfam PF04542 Sigma-70 region 2 91 160 6.9E-20 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 284 310 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 SUPERFAMILY SSF88946 53 161 1.38E-45 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 115 128 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 Gene3D G3DSA:1.10.10.10 161 211 5.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 15 325 39.499 T 28-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 Gene3D G3DSA:1.10.601.10 2 160 3.3E-60 T 28-03-2018 AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 Gene3D G3DSA:1.10.10.10 255 324 8.9E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 Pfam PF04539 Sigma-70 region 3 171 244 4.3E-22 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 SUPERFAMILY SSF88659 164 237 5.23E-16 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19095 2cf232434bb6f8867de90ae3fb654cbe 330 SUPERFAMILY SSF88659 221 320 2.62E-25 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS17430 ed39febd17fe47d75af161c001ff7a08 289 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 92 287 1.3E-82 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL549_RS17430 ed39febd17fe47d75af161c001ff7a08 289 Pfam PF00813 FliP family 92 283 6.3E-80 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL549_RS17430 ed39febd17fe47d75af161c001ff7a08 289 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 264 276 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL549_RS17430 ed39febd17fe47d75af161c001ff7a08 289 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 216 231 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL549_RS17430 ed39febd17fe47d75af161c001ff7a08 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 209 221 1.2E-17 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL549_RS17430 ed39febd17fe47d75af161c001ff7a08 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 88 97 1.2E-17 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL549_RS17430 ed39febd17fe47d75af161c001ff7a08 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 277 287 1.2E-17 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL549_RS17430 ed39febd17fe47d75af161c001ff7a08 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 1.2E-17 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL549_RS17430 ed39febd17fe47d75af161c001ff7a08 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 188 200 1.2E-17 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL549_RS17430 ed39febd17fe47d75af161c001ff7a08 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 160 174 1.2E-17 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL549_RS17430 ed39febd17fe47d75af161c001ff7a08 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 109 129 4.8E-66 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL549_RS17430 ed39febd17fe47d75af161c001ff7a08 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 261 286 4.8E-66 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL549_RS17430 ed39febd17fe47d75af161c001ff7a08 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 237 258 4.8E-66 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL549_RS17430 ed39febd17fe47d75af161c001ff7a08 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 236 4.8E-66 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL549_RS17430 ed39febd17fe47d75af161c001ff7a08 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 90 109 4.8E-66 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL549_RS17430 ed39febd17fe47d75af161c001ff7a08 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 129 148 4.8E-66 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL549_RS21915 5673bc80b1be5ce0d11f12e291b30a43 201 Gene3D G3DSA:3.40.30.10 18 201 4.6E-42 T 28-03-2018 AL549_RS21915 5673bc80b1be5ce0d11f12e291b30a43 201 PIRSF PIRSF001488 1 201 1.5E-70 T 28-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AL549_RS21915 5673bc80b1be5ce0d11f12e291b30a43 201 ProSitePatterns PS00194 Thioredoxin family active site. 42 60 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL549_RS21915 5673bc80b1be5ce0d11f12e291b30a43 201 SUPERFAMILY SSF52833 22 199 1.38E-45 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS21915 5673bc80b1be5ce0d11f12e291b30a43 201 Pfam PF01323 DSBA-like thioredoxin domain 42 189 1.0E-28 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AL549_RS17185 8058209de1e6adcabb4c2f9354bd214c 187 Pfam PF05036 Sporulation related domain 111 178 4.5E-13 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL549_RS17185 8058209de1e6adcabb4c2f9354bd214c 187 SUPERFAMILY SSF110997 110 183 4.84E-16 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL549_RS17185 8058209de1e6adcabb4c2f9354bd214c 187 Gene3D G3DSA:3.30.70.1070 106 175 6.6E-11 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL549_RS20590 0f73d4119ff3eb34043f789e00b3290e 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 49.889 T 28-03-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AL549_RS20590 0f73d4119ff3eb34043f789e00b3290e 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 283 3.0E-87 T 28-03-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AL549_RS20590 0f73d4119ff3eb34043f789e00b3290e 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 280 2.7E-61 T 28-03-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AL549_RS01270 b0d3a539b9689826b36961ec4466c107 324 SUPERFAMILY SSF53822 23 323 1.56E-76 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS01270 b0d3a539b9689826b36961ec4466c107 324 Gene3D G3DSA:3.40.50.2300 134 324 6.1E-37 T 28-03-2018 AL549_RS01270 b0d3a539b9689826b36961ec4466c107 324 Pfam PF13407 Periplasmic binding protein domain 27 296 8.6E-57 T 28-03-2018 IPR025997 Periplasmic binding protein AL549_RS01270 b0d3a539b9689826b36961ec4466c107 324 Gene3D G3DSA:3.40.50.2300 20 133 4.9E-13 T 28-03-2018 AL549_RS08615 c19bfb241528d661f834d5c862fef9dc 422 SUPERFAMILY SSF53720 11 414 1.44E-113 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL549_RS08615 c19bfb241528d661f834d5c862fef9dc 422 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 8 421 39.371 T 28-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL549_RS08615 c19bfb241528d661f834d5c862fef9dc 422 Pfam PF00171 Aldehyde dehydrogenase family 8 284 5.8E-16 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL549_RS08615 c19bfb241528d661f834d5c862fef9dc 422 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 328 349 - T 28-03-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL549_RS08615 c19bfb241528d661f834d5c862fef9dc 422 PIRSF PIRSF000151 1 422 1.8E-165 T 28-03-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AL549_RS08615 c19bfb241528d661f834d5c862fef9dc 422 Gene3D G3DSA:3.40.605.10 1 244 9.8E-42 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL549_RS08615 c19bfb241528d661f834d5c862fef9dc 422 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 16 411 2.4E-167 T 28-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL549_RS08615 c19bfb241528d661f834d5c862fef9dc 422 Gene3D G3DSA:3.40.605.10 245 422 1.9E-31 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL549_RS01005 32db446321ac707aca469919fa1c8ba2 404 SUPERFAMILY SSF52402 18 172 1.59E-24 T 28-03-2018 AL549_RS01005 32db446321ac707aca469919fa1c8ba2 404 Pfam PF00764 Arginosuccinate synthase 24 371 7.8E-55 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL549_RS01005 32db446321ac707aca469919fa1c8ba2 404 Gene3D G3DSA:3.40.50.620 5 184 3.1E-19 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS01005 32db446321ac707aca469919fa1c8ba2 404 Gene3D G3DSA:3.90.1260.10 185 393 1.3E-42 T 28-03-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL549_RS01005 32db446321ac707aca469919fa1c8ba2 404 SUPERFAMILY SSF69864 185 379 3.92E-46 T 28-03-2018 AL549_RS22200 7a5a6dbc823aa0a99beec5e9f72ab496 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 28-03-2018 AL549_RS22200 7a5a6dbc823aa0a99beec5e9f72ab496 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 28-03-2018 AL549_RS22200 7a5a6dbc823aa0a99beec5e9f72ab496 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 28-03-2018 AL549_RS22200 7a5a6dbc823aa0a99beec5e9f72ab496 108 Pfam PF00085 Thioredoxin 5 106 1.0E-32 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 AL549_RS22200 7a5a6dbc823aa0a99beec5e9f72ab496 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL549_RS22200 7a5a6dbc823aa0a99beec5e9f72ab496 108 PIRSF PIRSF000077 2 108 2.2E-42 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL549_RS22200 7a5a6dbc823aa0a99beec5e9f72ab496 108 SUPERFAMILY SSF52833 3 107 5.96E-38 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS22200 7a5a6dbc823aa0a99beec5e9f72ab496 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.9E-37 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL549_RS22200 7a5a6dbc823aa0a99beec5e9f72ab496 108 Gene3D G3DSA:3.40.30.10 1 108 1.7E-31 T 28-03-2018 AL549_RS07990 9f0de220203405e3447363086866e436 183 SUPERFAMILY SSF52972 9 178 3.84E-58 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL549_RS07990 9f0de220203405e3447363086866e436 183 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 13 177 3.4E-44 T 28-03-2018 IPR002786 Non-canonical purine NTP phosphatase AL549_RS07990 9f0de220203405e3447363086866e436 183 Pfam PF01931 Protein of unknown function DUF84 14 172 1.1E-54 T 28-03-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 AL549_RS07990 9f0de220203405e3447363086866e436 183 Hamap MF_00648 Non-canonical purine NTP phosphatase. 9 178 29.145 T 28-03-2018 IPR002786 Non-canonical purine NTP phosphatase AL549_RS07990 9f0de220203405e3447363086866e436 183 Gene3D G3DSA:3.90.950.10 8 177 2.6E-59 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL549_RS22555 d0704d0d60f14655b241416243ff2153 255 SUPERFAMILY SSF53474 4 252 5.77E-52 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS22555 d0704d0d60f14655b241416243ff2153 255 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 5 254 47.3 T 28-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AL549_RS22555 d0704d0d60f14655b241416243ff2153 255 Gene3D G3DSA:3.40.50.1820 2 255 9.7E-50 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS22555 d0704d0d60f14655b241416243ff2153 255 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 11 252 1.4E-109 T 28-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AL549_RS22555 d0704d0d60f14655b241416243ff2153 255 Pfam PF00561 alpha/beta hydrolase fold 16 242 1.8E-24 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS07655 ebe73212e0975b90959807faa535c349 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 1.4E-177 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain AL549_RS07655 ebe73212e0975b90959807faa535c349 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 5.0E-152 T 28-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AL549_RS07655 ebe73212e0975b90959807faa535c349 1487 Gene3D G3DSA:2.160.20.60 1212 1485 1.4E-94 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AL549_RS07655 ebe73212e0975b90959807faa535c349 1487 SUPERFAMILY SSF69336 1213 1465 3.53E-88 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AL549_RS07655 ebe73212e0975b90959807faa535c349 1487 SUPERFAMILY SSF56235 13 429 2.39E-150 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL549_RS07655 ebe73212e0975b90959807faa535c349 1487 Gene3D G3DSA:3.60.20.10 13 438 3.0E-147 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL549_RS07655 ebe73212e0975b90959807faa535c349 1487 SUPERFAMILY SSF51395 434 1191 2.08E-247 T 28-03-2018 AL549_RS07655 ebe73212e0975b90959807faa535c349 1487 Pfam PF01493 GXGXG motif 1236 1419 2.3E-73 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AL549_RS07655 ebe73212e0975b90959807faa535c349 1487 Gene3D G3DSA:3.20.20.70 439 779 2.3E-77 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS07655 ebe73212e0975b90959807faa535c349 1487 Pfam PF04898 Glutamate synthase central domain 458 738 1.7E-100 T 28-03-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AL549_RS07655 ebe73212e0975b90959807faa535c349 1487 Gene3D G3DSA:3.20.20.70 780 1207 4.3E-144 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS20580 771dec9fe66b4c173142c02baa77aa0d 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.372 T 28-03-2018 IPR022894 Oligoribonuclease GO:0000175 AL549_RS20580 771dec9fe66b4c173142c02baa77aa0d 181 Pfam PF00929 Exonuclease 9 170 5.0E-37 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL549_RS20580 771dec9fe66b4c173142c02baa77aa0d 181 SUPERFAMILY SSF53098 1 180 6.96E-48 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS20580 771dec9fe66b4c173142c02baa77aa0d 181 SMART SM00479 7 180 3.8E-22 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL549_RS20580 771dec9fe66b4c173142c02baa77aa0d 181 Gene3D G3DSA:3.30.420.10 2 181 2.2E-27 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS05725 8ee912b7ab5ee2db3aa9a377fa9b637c 892 SUPERFAMILY SSF52210 295 455 3.53E-40 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL549_RS05725 8ee912b7ab5ee2db3aa9a377fa9b637c 892 SUPERFAMILY SSF56059 492 698 9.68E-31 T 28-03-2018 AL549_RS05725 8ee912b7ab5ee2db3aa9a377fa9b637c 892 SUPERFAMILY SSF51735 3 141 5.91E-31 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS05725 8ee912b7ab5ee2db3aa9a377fa9b637c 892 Pfam PF13549 ATP-grasp domain 486 704 2.1E-66 T 28-03-2018 AL549_RS05725 8ee912b7ab5ee2db3aa9a377fa9b637c 892 Pfam PF00583 Acetyltransferase (GNAT) family 771 873 3.8E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS05725 8ee912b7ab5ee2db3aa9a377fa9b637c 892 SUPERFAMILY SSF52210 131 290 3.4E-35 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL549_RS05725 8ee912b7ab5ee2db3aa9a377fa9b637c 892 Gene3D G3DSA:3.40.50.720 3 127 1.3E-31 T 28-03-2018 AL549_RS05725 8ee912b7ab5ee2db3aa9a377fa9b637c 892 Gene3D G3DSA:3.40.50.261 128 291 1.9E-34 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL549_RS05725 8ee912b7ab5ee2db3aa9a377fa9b637c 892 Pfam PF13380 CoA binding domain 12 136 1.3E-22 T 28-03-2018 IPR003781 CoA-binding GO:0048037 AL549_RS05725 8ee912b7ab5ee2db3aa9a377fa9b637c 892 SMART SM00881 7 102 2.1E-23 T 28-03-2018 IPR003781 CoA-binding GO:0048037 AL549_RS05725 8ee912b7ab5ee2db3aa9a377fa9b637c 892 Gene3D G3DSA:3.30.470.20 572 724 3.2E-25 T 28-03-2018 AL549_RS05725 8ee912b7ab5ee2db3aa9a377fa9b637c 892 SUPERFAMILY SSF55729 732 876 6.86E-22 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS05725 8ee912b7ab5ee2db3aa9a377fa9b637c 892 Gene3D G3DSA:3.40.630.30 726 892 2.9E-21 T 28-03-2018 AL549_RS05725 8ee912b7ab5ee2db3aa9a377fa9b637c 892 Gene3D G3DSA:3.30.1490.20 510 571 3.2E-26 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL549_RS05725 8ee912b7ab5ee2db3aa9a377fa9b637c 892 Gene3D G3DSA:3.40.50.261 292 460 4.3E-37 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL549_RS05725 8ee912b7ab5ee2db3aa9a377fa9b637c 892 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 153 288 2.3E-44 T 28-03-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AL549_RS22670 046b881f9e4b11d28d0916049011c8a7 279 Pfam PF00005 ABC transporter 32 181 2.3E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS22670 046b881f9e4b11d28d0916049011c8a7 279 SUPERFAMILY SSF52540 6 254 1.09E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS22670 046b881f9e4b11d28d0916049011c8a7 279 Gene3D G3DSA:3.40.50.300 2 279 4.2E-76 T 28-03-2018 AL549_RS22670 046b881f9e4b11d28d0916049011c8a7 279 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS22670 046b881f9e4b11d28d0916049011c8a7 279 SMART SM00382 40 232 2.2E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS10880 ff63bd728e9f57336c66d9e06897174e 276 SMART SM00382 39 239 8.2E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS10880 ff63bd728e9f57336c66d9e06897174e 276 Pfam PF00005 ABC transporter 31 180 1.2E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS10880 ff63bd728e9f57336c66d9e06897174e 276 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS10880 ff63bd728e9f57336c66d9e06897174e 276 Gene3D G3DSA:3.40.50.300 1 275 6.2E-75 T 28-03-2018 AL549_RS10880 ff63bd728e9f57336c66d9e06897174e 276 SUPERFAMILY SSF52540 5 253 2.2E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS00665 7033c19203e920bc4900b1aaf79a2350 716 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 161 1.2E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL549_RS00665 7033c19203e920bc4900b1aaf79a2350 716 SUPERFAMILY SSF56935 42 704 3.48E-76 T 28-03-2018 AL549_RS00665 7033c19203e920bc4900b1aaf79a2350 716 Gene3D G3DSA:2.40.170.20 169 707 2.2E-37 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL549_RS00665 7033c19203e920bc4900b1aaf79a2350 716 Gene3D G3DSA:2.170.130.10 35 167 1.4E-27 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL549_RS00665 7033c19203e920bc4900b1aaf79a2350 716 Pfam PF00593 TonB dependent receptor 259 706 1.1E-19 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL549_RS02870 16260f8c6235dce5f547f401120d618a 110 SUPERFAMILY SSF51182 8 108 1.57E-18 T 28-03-2018 IPR011051 RmlC-like cupin domain AL549_RS02870 16260f8c6235dce5f547f401120d618a 110 Pfam PF07883 Cupin domain 51 108 3.0E-8 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AL549_RS02870 16260f8c6235dce5f547f401120d618a 110 Gene3D G3DSA:2.60.120.10 20 110 3.5E-17 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS11540 7c5f0c7069a7d519a07c69a69acb7915 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS11540 7c5f0c7069a7d519a07c69a69acb7915 284 Gene3D G3DSA:1.10.10.10 1 98 3.7E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS11540 7c5f0c7069a7d519a07c69a69acb7915 284 Pfam PF01380 SIS domain 124 252 2.0E-24 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL549_RS11540 7c5f0c7069a7d519a07c69a69acb7915 284 Gene3D G3DSA:3.40.50.10490 99 279 2.8E-36 T 28-03-2018 AL549_RS11540 7c5f0c7069a7d519a07c69a69acb7915 284 SUPERFAMILY SSF53697 93 279 3.71E-40 T 28-03-2018 AL549_RS11540 7c5f0c7069a7d519a07c69a69acb7915 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.7E-29 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL549_RS20655 d6e11f4730da990f59b9d4b9f0e9aae9 323 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 318 1.1E-126 T 28-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AL549_RS20655 d6e11f4730da990f59b9d4b9f0e9aae9 323 Gene3D G3DSA:3.30.930.10 3 321 2.1E-64 T 28-03-2018 AL549_RS20655 d6e11f4730da990f59b9d4b9f0e9aae9 323 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 323 52.768 T 28-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AL549_RS20655 d6e11f4730da990f59b9d4b9f0e9aae9 323 SUPERFAMILY SSF55681 10 320 1.27E-81 T 28-03-2018 AL549_RS20655 d6e11f4730da990f59b9d4b9f0e9aae9 323 PRINTS PR00982 Lysyl-tRNA synthetase signature 97 114 2.8E-5 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL549_RS20655 d6e11f4730da990f59b9d4b9f0e9aae9 323 PRINTS PR00982 Lysyl-tRNA synthetase signature 29 39 2.8E-5 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL549_RS20655 d6e11f4730da990f59b9d4b9f0e9aae9 323 Pfam PF00152 tRNA synthetases class II (D, K and N) 11 319 4.8E-43 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS20240 25f2a093649aa7fff41916bdff554c0a 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 328 3.9E-168 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AL549_RS20240 25f2a093649aa7fff41916bdff554c0a 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 2.4E-129 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AL549_RS20240 25f2a093649aa7fff41916bdff554c0a 335 Gene3D G3DSA:3.30.540.10 151 335 6.6E-53 T 28-03-2018 AL549_RS20240 25f2a093649aa7fff41916bdff554c0a 335 Gene3D G3DSA:3.30.540.10 1 147 4.2E-54 T 28-03-2018 AL549_RS20240 25f2a093649aa7fff41916bdff554c0a 335 PIRSF PIRSF004532 1 332 8.5E-136 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AL549_RS20240 25f2a093649aa7fff41916bdff554c0a 335 SUPERFAMILY SSF56655 1 324 4.94E-108 T 28-03-2018 AL549_RS22505 383b561b23a7d4e894777bb97412e361 120 SUPERFAMILY SSF54523 40 118 6.67E-24 T 28-03-2018 AL549_RS22505 383b561b23a7d4e894777bb97412e361 120 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS22505 383b561b23a7d4e894777bb97412e361 120 Pfam PF02501 Type II secretion system (T2SS), protein I 43 118 5.7E-23 T 28-03-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 AL549_RS22505 383b561b23a7d4e894777bb97412e361 120 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 4.3E-5 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS22505 383b561b23a7d4e894777bb97412e361 120 TIGRFAM TIGR01707 gspI: type II secretion system protein I 9 106 2.3E-36 T 28-03-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 AL549_RS22505 383b561b23a7d4e894777bb97412e361 120 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 29 2.3E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS22505 383b561b23a7d4e894777bb97412e361 120 Gene3D G3DSA:3.30.1300.30 34 120 8.4E-27 T 28-03-2018 AL549_RS15780 0572a186b69ddd2b07bbbfb1cb4b8f4e 311 Gene3D G3DSA:3.40.190.10 117 307 1.5E-22 T 28-03-2018 AL549_RS15780 0572a186b69ddd2b07bbbfb1cb4b8f4e 311 Pfam PF09084 NMT1/THI5 like 31 239 2.1E-18 T 28-03-2018 IPR015168 SsuA/THI5-like AL549_RS15780 0572a186b69ddd2b07bbbfb1cb4b8f4e 311 SUPERFAMILY SSF53850 20 245 3.21E-27 T 28-03-2018 AL549_RS15780 0572a186b69ddd2b07bbbfb1cb4b8f4e 311 Gene3D G3DSA:3.40.190.10 16 116 3.7E-6 T 28-03-2018 AL549_RS05235 7ed06daa36084df952df4144d98558ad 352 Gene3D G3DSA:3.20.20.190 20 349 8.0E-64 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AL549_RS05235 7ed06daa36084df952df4144d98558ad 352 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 27 343 1.2E-64 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AL549_RS05235 7ed06daa36084df952df4144d98558ad 352 SUPERFAMILY SSF51695 22 348 3.14E-90 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AL549_RS18945 f1a44b2c3ae9a6cb40894386c644dc67 249 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.6E-71 T 28-03-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL549_RS18945 f1a44b2c3ae9a6cb40894386c644dc67 249 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 249 119.721 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL549_RS18945 f1a44b2c3ae9a6cb40894386c644dc67 249 PIRSF PIRSF000386 1 249 1.7E-102 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL549_RS18945 f1a44b2c3ae9a6cb40894386c644dc67 249 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 3.4E-110 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL549_RS18945 f1a44b2c3ae9a6cb40894386c644dc67 249 SUPERFAMILY SSF75217 1 246 1.77E-103 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AL549_RS18945 f1a44b2c3ae9a6cb40894386c644dc67 249 Gene3D G3DSA:1.10.1270.20 170 249 5.8E-35 T 28-03-2018 AL549_RS18945 f1a44b2c3ae9a6cb40894386c644dc67 249 Gene3D G3DSA:3.40.1280.10 1 169 2.3E-73 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL549_RS05490 cbb31038ef5920433376f870f7f6d134 461 Pfam PF01554 MatE 252 414 3.1E-19 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS05490 cbb31038ef5920433376f870f7f6d134 461 Pfam PF01554 MatE 28 188 2.7E-26 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS05490 cbb31038ef5920433376f870f7f6d134 461 PIRSF PIRSF006603 4 459 2.4E-62 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS05490 cbb31038ef5920433376f870f7f6d134 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 426 3.3E-55 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS19000 90c366577612ca1c992968851f457463 316 SMART SM00829 12 312 2.3E-14 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL549_RS19000 90c366577612ca1c992968851f457463 316 Gene3D G3DSA:3.90.180.10 239 316 8.3E-8 T 28-03-2018 AL549_RS19000 90c366577612ca1c992968851f457463 316 SUPERFAMILY SSF50129 4 154 1.0E-34 T 28-03-2018 IPR011032 GroES-like AL549_RS19000 90c366577612ca1c992968851f457463 316 SUPERFAMILY SSF51735 122 246 5.22E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS19000 90c366577612ca1c992968851f457463 316 Gene3D G3DSA:3.90.180.10 1 157 6.1E-47 T 28-03-2018 AL549_RS19000 90c366577612ca1c992968851f457463 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 6.0E-20 T 28-03-2018 AL549_RS19000 90c366577612ca1c992968851f457463 316 Gene3D G3DSA:3.40.50.720 158 238 4.0E-13 T 28-03-2018 AL549_RS19000 90c366577612ca1c992968851f457463 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 92 6.4E-7 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL549_RS18345 329f8dbcd67546d8c4bd85a7f74c1cd1 488 Pfam PF13629 Pilus formation protein N terminal region 26 95 7.9E-19 T 28-03-2018 IPR032789 Pilus formation protein, N-terminal AL549_RS18345 329f8dbcd67546d8c4bd85a7f74c1cd1 488 Pfam PF00263 Bacterial type II and III secretion system protein 260 422 1.0E-39 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 AL549_RS18345 329f8dbcd67546d8c4bd85a7f74c1cd1 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 178 188 1.2E-11 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS18345 329f8dbcd67546d8c4bd85a7f74c1cd1 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 388 406 1.2E-11 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS18345 329f8dbcd67546d8c4bd85a7f74c1cd1 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 254 278 1.2E-11 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS18345 329f8dbcd67546d8c4bd85a7f74c1cd1 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 411 425 1.2E-11 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS00090 7f28260966bd2d8eee25f1e7c3bb12d6 393 SUPERFAMILY SSF53850 25 392 1.58E-89 T 28-03-2018 AL549_RS00090 7f28260966bd2d8eee25f1e7c3bb12d6 393 Gene3D G3DSA:3.40.190.10 137 393 2.3E-40 T 28-03-2018 AL549_RS00090 7f28260966bd2d8eee25f1e7c3bb12d6 393 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 130 147 - T 28-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 AL549_RS00090 7f28260966bd2d8eee25f1e7c3bb12d6 393 Pfam PF13416 Bacterial extracellular solute-binding protein 47 319 7.0E-44 T 28-03-2018 AL549_RS00090 7f28260966bd2d8eee25f1e7c3bb12d6 393 PRINTS PR00181 Maltose binding protein signature 67 85 1.7E-79 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL549_RS00090 7f28260966bd2d8eee25f1e7c3bb12d6 393 PRINTS PR00181 Maltose binding protein signature 354 373 1.7E-79 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL549_RS00090 7f28260966bd2d8eee25f1e7c3bb12d6 393 PRINTS PR00181 Maltose binding protein signature 168 187 1.7E-79 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL549_RS00090 7f28260966bd2d8eee25f1e7c3bb12d6 393 PRINTS PR00181 Maltose binding protein signature 148 167 1.7E-79 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL549_RS00090 7f28260966bd2d8eee25f1e7c3bb12d6 393 PRINTS PR00181 Maltose binding protein signature 296 317 1.7E-79 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL549_RS00090 7f28260966bd2d8eee25f1e7c3bb12d6 393 PRINTS PR00181 Maltose binding protein signature 33 51 1.7E-79 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL549_RS00090 7f28260966bd2d8eee25f1e7c3bb12d6 393 PRINTS PR00181 Maltose binding protein signature 230 249 1.7E-79 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL549_RS00090 7f28260966bd2d8eee25f1e7c3bb12d6 393 PRINTS PR00181 Maltose binding protein signature 127 146 1.7E-79 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL549_RS02810 55bfa80828ebd8de2c3ca583d02805c3 126 Pfam PF11777 Protein of unknown function (DUF3316) 6 119 8.4E-18 T 28-03-2018 IPR016879 Uncharacterised conserved protein UCP028299 AL549_RS02810 55bfa80828ebd8de2c3ca583d02805c3 126 PIRSF PIRSF028299 4 126 4.3E-50 T 28-03-2018 IPR016879 Uncharacterised conserved protein UCP028299 AL549_RS21745 04c40cb01c04716b685647940cfc15a2 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS21745 04c40cb01c04716b685647940cfc15a2 245 Gene3D G3DSA:3.40.50.300 1 244 2.2E-77 T 28-03-2018 AL549_RS21745 04c40cb01c04716b685647940cfc15a2 245 PIRSF PIRSF039085 1 244 4.6E-107 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL549_RS21745 04c40cb01c04716b685647940cfc15a2 245 SUPERFAMILY SSF52540 1 238 7.19E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS21745 04c40cb01c04716b685647940cfc15a2 245 SMART SM00382 26 216 4.4E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS21745 04c40cb01c04716b685647940cfc15a2 245 Pfam PF00005 ABC transporter 17 168 5.4E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS10500 32abb384dec0b28f21796fa2cd9b2e32 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 2.0E-17 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL549_RS10500 32abb384dec0b28f21796fa2cd9b2e32 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 4.6E-54 T 28-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AL549_RS10500 32abb384dec0b28f21796fa2cd9b2e32 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL549_RS10500 32abb384dec0b28f21796fa2cd9b2e32 185 PIRSF PIRSF000847 1 184 2.0E-46 T 28-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AL549_RS16845 c41a6fba9c7778e07fd307ce0d9e9a69 227 SUPERFAMILY SSF52540 4 225 2.93E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16845 c41a6fba9c7778e07fd307ce0d9e9a69 227 Pfam PF00005 ABC transporter 24 172 1.4E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS16845 c41a6fba9c7778e07fd307ce0d9e9a69 227 Gene3D G3DSA:3.40.50.300 1 226 2.2E-60 T 28-03-2018 AL549_RS16845 c41a6fba9c7778e07fd307ce0d9e9a69 227 SMART SM00382 33 221 1.9E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS16845 c41a6fba9c7778e07fd307ce0d9e9a69 227 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS16845 c41a6fba9c7778e07fd307ce0d9e9a69 227 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 1.0E-105 T 28-03-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 AL549_RS18625 3447e47c1d4980544692625facd3423f 157 SUPERFAMILY SSF54534 81 156 7.98E-24 T 28-03-2018 AL549_RS18625 3447e47c1d4980544692625facd3423f 157 PIRSF PIRSF006092 1 157 4.4E-48 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AL549_RS18625 3447e47c1d4980544692625facd3423f 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 1.2E-24 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AL549_RS18625 3447e47c1d4980544692625facd3423f 157 Gene3D G3DSA:1.10.287.180 3 75 3.0E-26 T 28-03-2018 AL549_RS18625 3447e47c1d4980544692625facd3423f 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 5.3E-54 T 28-03-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AL549_RS18625 3447e47c1d4980544692625facd3423f 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 6.5E-28 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL549_RS18625 3447e47c1d4980544692625facd3423f 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL549_RS18625 3447e47c1d4980544692625facd3423f 157 Gene3D G3DSA:3.10.50.30 76 157 1.2E-27 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL549_RS18625 3447e47c1d4980544692625facd3423f 157 SUPERFAMILY SSF46557 2 75 5.49E-25 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AL549_RS18625 3447e47c1d4980544692625facd3423f 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL549_RS18625 3447e47c1d4980544692625facd3423f 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 31.554 T 28-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AL549_RS12375 feef8eafe4a59645a5280784dc88a20b 599 Gene3D G3DSA:1.20.1560.10 4 347 1.5E-46 T 28-03-2018 AL549_RS12375 feef8eafe4a59645a5280784dc88a20b 599 Pfam PF00005 ABC transporter 376 524 3.6E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS12375 feef8eafe4a59645a5280784dc88a20b 599 Pfam PF00664 ABC transporter transmembrane region 30 312 2.6E-31 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS12375 feef8eafe4a59645a5280784dc88a20b 599 SUPERFAMILY SSF90123 12 345 2.22E-56 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS12375 feef8eafe4a59645a5280784dc88a20b 599 Gene3D G3DSA:3.40.50.300 348 599 2.0E-68 T 28-03-2018 AL549_RS12375 feef8eafe4a59645a5280784dc88a20b 599 SMART SM00382 385 572 6.9E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS12375 feef8eafe4a59645a5280784dc88a20b 599 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS12375 feef8eafe4a59645a5280784dc88a20b 599 SUPERFAMILY SSF52540 357 592 1.17E-80 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16015 33c15da91bd85ded2dd1f69fee8d0df0 466 Pfam PF04715 Anthranilate synthase component I, N terminal region 37 168 3.2E-27 T 28-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL549_RS16015 33c15da91bd85ded2dd1f69fee8d0df0 466 Gene3D G3DSA:3.60.120.10 16 466 2.7E-157 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AL549_RS16015 33c15da91bd85ded2dd1f69fee8d0df0 466 Pfam PF00425 chorismate binding enzyme 204 457 2.9E-97 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AL549_RS16015 33c15da91bd85ded2dd1f69fee8d0df0 466 PRINTS PR00095 Anthranilate synthase component I signature 305 318 2.9E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL549_RS16015 33c15da91bd85ded2dd1f69fee8d0df0 466 PRINTS PR00095 Anthranilate synthase component I signature 414 428 2.9E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL549_RS16015 33c15da91bd85ded2dd1f69fee8d0df0 466 PRINTS PR00095 Anthranilate synthase component I signature 319 332 2.9E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL549_RS16015 33c15da91bd85ded2dd1f69fee8d0df0 466 PRINTS PR00095 Anthranilate synthase component I signature 399 413 2.9E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL549_RS16015 33c15da91bd85ded2dd1f69fee8d0df0 466 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 122 458 5.3E-125 T 28-03-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 AL549_RS16015 33c15da91bd85ded2dd1f69fee8d0df0 466 SUPERFAMILY SSF56322 22 465 7.59E-145 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AL549_RS18975 a8c914624d0bb57cf95fcb836cf422f2 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.585 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL549_RS18975 a8c914624d0bb57cf95fcb836cf422f2 172 PIRSF PIRSF006160 1 162 1.0E-66 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL549_RS18975 a8c914624d0bb57cf95fcb836cf422f2 172 SUPERFAMILY SSF63411 4 162 3.85E-66 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL549_RS18975 a8c914624d0bb57cf95fcb836cf422f2 172 Gene3D G3DSA:3.30.1360.80 3 161 6.5E-64 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL549_RS18975 a8c914624d0bb57cf95fcb836cf422f2 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 2.4E-61 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL549_RS18975 a8c914624d0bb57cf95fcb836cf422f2 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 6.0E-84 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL549_RS18975 a8c914624d0bb57cf95fcb836cf422f2 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 8.7E-51 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL549_RS18975 a8c914624d0bb57cf95fcb836cf422f2 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 8.7E-51 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL549_RS18975 a8c914624d0bb57cf95fcb836cf422f2 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 8.7E-51 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL549_RS18975 a8c914624d0bb57cf95fcb836cf422f2 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 8.7E-51 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL549_RS18975 a8c914624d0bb57cf95fcb836cf422f2 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 8.7E-51 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL549_RS12045 108568211b329b099be6e76a08e4c1c2 434 SUPERFAMILY SSF56954 23 428 7.85E-87 T 28-03-2018 AL549_RS12045 108568211b329b099be6e76a08e4c1c2 434 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 428 6.2E-120 T 28-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AL549_RS12045 108568211b329b099be6e76a08e4c1c2 434 Pfam PF02321 Outer membrane efflux protein 230 414 5.3E-29 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL549_RS12045 108568211b329b099be6e76a08e4c1c2 434 Pfam PF02321 Outer membrane efflux protein 24 208 1.4E-22 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL549_RS12045 108568211b329b099be6e76a08e4c1c2 434 Gene3D G3DSA:1.20.1600.10 19 424 7.8E-67 T 28-03-2018 AL549_RS15500 ae10b670b825619efa03bb17e35fbb50 262 Pfam PF00440 Bacterial regulatory proteins, tetR family 39 81 1.0E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS15500 ae10b670b825619efa03bb17e35fbb50 262 Gene3D G3DSA:1.10.10.60 7 70 4.7E-9 T 28-03-2018 AL549_RS15500 ae10b670b825619efa03bb17e35fbb50 262 SUPERFAMILY SSF46689 28 86 2.0E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS15500 ae10b670b825619efa03bb17e35fbb50 262 Gene3D G3DSA:1.10.10.60 71 252 8.8E-6 T 28-03-2018 AL549_RS18380 9476bfc92a8bdd02e3306a61eb20b32e 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL549_RS18380 9476bfc92a8bdd02e3306a61eb20b32e 561 SUPERFAMILY SSF56801 14 547 4.84E-110 T 28-03-2018 AL549_RS18380 9476bfc92a8bdd02e3306a61eb20b32e 561 Gene3D G3DSA:2.30.38.10 362 433 4.3E-19 T 28-03-2018 AL549_RS18380 9476bfc92a8bdd02e3306a61eb20b32e 561 Gene3D G3DSA:3.30.300.30 435 551 1.7E-10 T 28-03-2018 AL549_RS18380 9476bfc92a8bdd02e3306a61eb20b32e 561 Pfam PF00501 AMP-binding enzyme 24 440 5.5E-86 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL549_RS18380 9476bfc92a8bdd02e3306a61eb20b32e 561 Gene3D G3DSA:3.40.50.980 187 361 2.3E-35 T 28-03-2018 AL549_RS18380 9476bfc92a8bdd02e3306a61eb20b32e 561 Gene3D G3DSA:3.40.50.980 15 186 3.9E-32 T 28-03-2018 AL549_RS04480 6e708fb0c14fd9ffac8ec4a30a3149b1 543 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 39 542 8.5E-214 T 28-03-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AL549_RS04480 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 38 63 8.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04480 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 311 326 8.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04480 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 448 469 8.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04480 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 112 136 8.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04480 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 265 286 8.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04480 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 155 167 8.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04480 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 370 388 8.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04480 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 398 417 8.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04480 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 214 233 8.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04480 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 85 108 8.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04480 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 335 356 8.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04480 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 185 203 8.1E-122 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04480 6e708fb0c14fd9ffac8ec4a30a3149b1 543 SUPERFAMILY SSF81442 36 542 6.02E-194 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04480 6e708fb0c14fd9ffac8ec4a30a3149b1 543 Gene3D G3DSA:1.20.210.10 35 543 1.5E-219 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04480 6e708fb0c14fd9ffac8ec4a30a3149b1 543 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 267 321 - T 28-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04480 6e708fb0c14fd9ffac8ec4a30a3149b1 543 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 47 489 2.1E-151 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS00085 d7a8683ca92f9b93ba47bf627bdfacff 523 SUPERFAMILY SSF161098 271 512 2.49E-58 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS00085 d7a8683ca92f9b93ba47bf627bdfacff 523 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 110 269 3.0E-55 T 28-03-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain AL549_RS00085 d7a8683ca92f9b93ba47bf627bdfacff 523 Gene3D G3DSA:3.10.650.10 110 142 0.21 T 28-03-2018 AL549_RS00085 d7a8683ca92f9b93ba47bf627bdfacff 523 Gene3D G3DSA:3.10.650.10 205 277 1.8E-26 T 28-03-2018 AL549_RS00085 d7a8683ca92f9b93ba47bf627bdfacff 523 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 306 511 5.9E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS00085 d7a8683ca92f9b93ba47bf627bdfacff 523 SUPERFAMILY SSF160964 24 269 6.8E-83 T 28-03-2018 AL549_RS00085 d7a8683ca92f9b93ba47bf627bdfacff 523 Gene3D G3DSA:1.10.3720.10 279 521 9.7E-41 T 28-03-2018 AL549_RS00085 d7a8683ca92f9b93ba47bf627bdfacff 523 Gene3D G3DSA:2.40.430.10 143 204 1.8E-20 T 28-03-2018 AL549_RS00085 d7a8683ca92f9b93ba47bf627bdfacff 523 Gene3D G3DSA:1.20.58.370 18 105 5.9E-25 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain AL549_RS11375 0376e60ffc293ed9dbe6e38aa198bad7 553 Gene3D G3DSA:3.40.50.2030 379 553 7.4E-60 T 28-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AL549_RS11375 0376e60ffc293ed9dbe6e38aa198bad7 553 Gene3D G3DSA:1.20.1270.20 153 235 1.1E-20 T 28-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AL549_RS11375 0376e60ffc293ed9dbe6e38aa198bad7 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 5.5E-225 T 28-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AL549_RS11375 0376e60ffc293ed9dbe6e38aa198bad7 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.18 T 28-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AL549_RS11375 0376e60ffc293ed9dbe6e38aa198bad7 553 Gene3D G3DSA:1.20.1270.20 1 151 5.1E-36 T 28-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AL549_RS11375 0376e60ffc293ed9dbe6e38aa198bad7 553 PIRSF PIRSF000076 1 553 1.1E-240 T 28-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AL549_RS11375 0376e60ffc293ed9dbe6e38aa198bad7 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 547 1.7E-162 T 28-03-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 AL549_RS11375 0376e60ffc293ed9dbe6e38aa198bad7 553 Gene3D G3DSA:3.40.50.2030 238 378 7.3E-67 T 28-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AL549_RS11375 0376e60ffc293ed9dbe6e38aa198bad7 553 SUPERFAMILY SSF56821 1 551 3.27E-193 T 28-03-2018 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 AL549_RS22445 910f0e2f51bab768acc4e27ca7beea01 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.422 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AL549_RS22445 910f0e2f51bab768acc4e27ca7beea01 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 2.7E-63 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AL549_RS22445 910f0e2f51bab768acc4e27ca7beea01 144 Gene3D G3DSA:3.50.80.10 1 144 8.0E-50 T 28-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain AL549_RS22445 910f0e2f51bab768acc4e27ca7beea01 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 2.1E-50 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AL549_RS22445 910f0e2f51bab768acc4e27ca7beea01 144 SUPERFAMILY SSF69500 2 143 1.11E-52 T 28-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain AL549_RS02240 0674f2056622149b0a23d2bd5880e608 486 ProSitePatterns PS00523 Sulfatases signature 1. 47 59 - T 28-03-2018 IPR024607 Sulfatase, conserved site AL549_RS02240 0674f2056622149b0a23d2bd5880e608 486 Pfam PF00884 Sulfatase 2 370 1.7E-39 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL549_RS02240 0674f2056622149b0a23d2bd5880e608 486 Gene3D G3DSA:3.40.720.10 331 399 4.6E-9 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS02240 0674f2056622149b0a23d2bd5880e608 486 Gene3D G3DSA:3.40.720.10 2 330 4.9E-55 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS02240 0674f2056622149b0a23d2bd5880e608 486 Gene3D G3DSA:3.30.1120.10 401 483 4.5E-15 T 28-03-2018 AL549_RS02240 0674f2056622149b0a23d2bd5880e608 486 Pfam PF16347 Domain of unknown function (DUF4976) 375 473 6.6E-9 T 28-03-2018 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096 AL549_RS02240 0674f2056622149b0a23d2bd5880e608 486 SUPERFAMILY SSF53649 2 473 3.05E-96 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS11240 0941671b052046f0221ea6eddbad95f7 329 Gene3D G3DSA:2.40.160.10 8 329 2.1E-19 T 28-03-2018 AL549_RS11240 0941671b052046f0221ea6eddbad95f7 329 SUPERFAMILY SSF56935 44 329 3.87E-20 T 28-03-2018 AL549_RS11240 0941671b052046f0221ea6eddbad95f7 329 Pfam PF13609 Gram-negative porin 8 313 9.1E-25 T 28-03-2018 AL549_RS13750 43c1692d3c2ea447a961a33dd56b60e2 101 Pfam PF07978 NIPSNAP 5 99 1.5E-25 T 28-03-2018 IPR012577 NIPSNAP AL549_RS13750 43c1692d3c2ea447a961a33dd56b60e2 101 SUPERFAMILY SSF54909 1 99 1.07E-21 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL549_RS13750 43c1692d3c2ea447a961a33dd56b60e2 101 Gene3D G3DSA:3.30.70.100 1 100 1.5E-18 T 28-03-2018 AL549_RS14185 43c1692d3c2ea447a961a33dd56b60e2 101 Pfam PF07978 NIPSNAP 5 99 1.5E-25 T 28-03-2018 IPR012577 NIPSNAP AL549_RS14185 43c1692d3c2ea447a961a33dd56b60e2 101 SUPERFAMILY SSF54909 1 99 1.07E-21 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL549_RS14185 43c1692d3c2ea447a961a33dd56b60e2 101 Gene3D G3DSA:3.30.70.100 1 100 1.5E-18 T 28-03-2018 AL549_RS05065 73ad2f786a86e196db579b52b2140d5a 1174 Pfam PF06761 Intracellular multiplication and human macrophage-killing 505 804 3.7E-71 T 28-03-2018 IPR009612 ImcF-related AL549_RS05065 73ad2f786a86e196db579b52b2140d5a 1174 Pfam PF14331 ImcF-related N-terminal domain 194 451 4.8E-90 T 28-03-2018 IPR025743 ImcF-related, N-terminal domain AL549_RS05065 73ad2f786a86e196db579b52b2140d5a 1174 Pfam PF06744 Type VI secretion protein IcmF C-terminal 929 1122 6.0E-57 T 28-03-2018 IPR010623 Type VI secretion system IcmF, C-terminal AL549_RS05065 73ad2f786a86e196db579b52b2140d5a 1174 SUPERFAMILY SSF52540 120 305 8.82E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS05065 73ad2f786a86e196db579b52b2140d5a 1174 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 18 1172 0.0 T 28-03-2018 IPR017731 Type VI secretion system, IcmF AL549_RS05065 73ad2f786a86e196db579b52b2140d5a 1174 Gene3D G3DSA:3.40.50.300 62 142 9.8E-5 T 28-03-2018 AL549_RS05065 73ad2f786a86e196db579b52b2140d5a 1174 Gene3D G3DSA:3.40.50.300 143 394 3.5E-9 T 28-03-2018 AL549_RS01400 7a87d013d8fa3ebfd0be1deb82129eae 328 Pfam PF00005 ABC transporter 35 188 2.0E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS01400 7a87d013d8fa3ebfd0be1deb82129eae 328 Gene3D G3DSA:3.40.50.300 7 327 3.1E-70 T 28-03-2018 AL549_RS01400 7a87d013d8fa3ebfd0be1deb82129eae 328 SMART SM00382 43 238 1.4E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS01400 7a87d013d8fa3ebfd0be1deb82129eae 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 324 1.6E-21 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS01400 7a87d013d8fa3ebfd0be1deb82129eae 328 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS01400 7a87d013d8fa3ebfd0be1deb82129eae 328 SUPERFAMILY SSF52540 10 259 7.81E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS01400 7a87d013d8fa3ebfd0be1deb82129eae 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 305 3.1E-15 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS07335 ff127cc68a2e45534f5bceebb60fcd03 153 Gene3D G3DSA:1.20.5.830 111 152 2.1E-25 T 28-03-2018 IPR027402 LuxT regulator, C-terminal domain AL549_RS07335 ff127cc68a2e45534f5bceebb60fcd03 153 Gene3D G3DSA:1.10.10.60 1 61 5.7E-9 T 28-03-2018 AL549_RS07335 ff127cc68a2e45534f5bceebb60fcd03 153 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.8E-4 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS07335 ff127cc68a2e45534f5bceebb60fcd03 153 Gene3D G3DSA:1.10.287.790 62 107 5.9E-23 T 28-03-2018 IPR027404 LuxT regulator, helix hairpin domain AL549_RS07335 ff127cc68a2e45534f5bceebb60fcd03 153 SUPERFAMILY SSF46689 1 74 1.23E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS13340 f83d8a5c79882b659cdabd07031b2574 109 Gene3D G3DSA:2.20.25.10 80 109 8.1E-4 T 28-03-2018 AL549_RS00700 32c01b0691060c59bae254bda257c999 295 SMART SM00342 208 291 3.5E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS00700 32c01b0691060c59bae254bda257c999 295 Gene3D G3DSA:2.60.120.10 25 246 2.9E-16 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS00700 32c01b0691060c59bae254bda257c999 295 Pfam PF12833 Helix-turn-helix domain 215 292 2.4E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS00700 32c01b0691060c59bae254bda257c999 295 SUPERFAMILY SSF46689 191 242 3.51E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS00700 32c01b0691060c59bae254bda257c999 295 SUPERFAMILY SSF46689 244 294 3.67E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS00700 32c01b0691060c59bae254bda257c999 295 Gene3D G3DSA:1.10.10.60 247 295 1.5E-13 T 28-03-2018 AL549_RS07910 28fbe48b90cf061a99a4d14b01804fc5 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 1.3E-96 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AL549_RS07910 28fbe48b90cf061a99a4d14b01804fc5 316 Pfam PF02401 LytB protein 3 284 6.8E-92 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AL549_RS07910 28fbe48b90cf061a99a4d14b01804fc5 316 Gene3D G3DSA:3.40.50.2300 80 294 9.7E-5 T 28-03-2018 AL549_RS07910 28fbe48b90cf061a99a4d14b01804fc5 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 37.803 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 Hamap MF_01961 Catalase-peroxidase [katG]. 7 723 40.025 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 1.1E-51 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 1.1E-51 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 1.1E-51 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 1.1E-51 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 1.1E-51 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 2.4E-18 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 2.4E-18 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 2.4E-18 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 2.4E-18 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 2.4E-18 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 Gene3D G3DSA:1.10.520.10 443 592 5.2E-36 T 28-03-2018 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 SUPERFAMILY SSF48113 432 722 1.19E-112 T 28-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 Gene3D G3DSA:1.10.520.10 56 214 5.0E-39 T 28-03-2018 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 SUPERFAMILY SSF48113 19 431 8.84E-153 T 28-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 Pfam PF00141 Peroxidase 405 698 5.1E-38 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 Pfam PF00141 Peroxidase 77 398 1.7E-52 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 Gene3D G3DSA:1.10.420.10 593 699 6.6E-36 T 28-03-2018 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 Gene3D G3DSA:1.10.420.10 232 399 2.5E-43 T 28-03-2018 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 723 0.0 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AL549_RS11860 58609828e0dd0b467572d8a5d4cfe9a2 723 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 28-03-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 AL549_RS04805 5cab3adb69a03fa5cfabccee275b920f 534 SUPERFAMILY SSF52096 25 267 4.98E-69 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS04805 5cab3adb69a03fa5cfabccee275b920f 534 Pfam PF01039 Carboxyl transferase domain 48 523 4.9E-142 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 AL549_RS04805 5cab3adb69a03fa5cfabccee275b920f 534 Gene3D G3DSA:3.90.226.10 277 529 4.7E-65 T 28-03-2018 AL549_RS04805 5cab3adb69a03fa5cfabccee275b920f 534 Gene3D G3DSA:3.90.226.10 9 276 2.5E-65 T 28-03-2018 AL549_RS04805 5cab3adb69a03fa5cfabccee275b920f 534 SUPERFAMILY SSF52096 237 517 8.14E-82 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS12305 efb631cf70f299c68d3388661bc1213a 231 SUPERFAMILY SSF52540 24 203 2.53E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS12305 efb631cf70f299c68d3388661bc1213a 231 Gene3D G3DSA:3.40.50.300 21 214 2.6E-16 T 28-03-2018 AL549_RS20945 db0f23d854db8ad77d704d80793993d2 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 28-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20945 db0f23d854db8ad77d704d80793993d2 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.5E-8 T 28-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20945 db0f23d854db8ad77d704d80793993d2 1400 Gene3D G3DSA:2.40.50.100 1009 1039 0.12 T 28-03-2018 AL549_RS20945 db0f23d854db8ad77d704d80793993d2 1400 Gene3D G3DSA:2.40.50.100 1040 1123 4.5E-13 T 28-03-2018 AL549_RS20945 db0f23d854db8ad77d704d80793993d2 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.988 T 28-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20945 db0f23d854db8ad77d704d80793993d2 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 5.9E-88 T 28-03-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20945 db0f23d854db8ad77d704d80793993d2 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 5.1E-27 T 28-03-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20945 db0f23d854db8ad77d704d80793993d2 1400 Gene3D G3DSA:2.40.40.20 346 488 5.5E-40 T 28-03-2018 AL549_RS20945 db0f23d854db8ad77d704d80793993d2 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 3.5E-77 T 28-03-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20945 db0f23d854db8ad77d704d80793993d2 1400 SMART SM00663 235 514 1.1E-184 T 28-03-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20945 db0f23d854db8ad77d704d80793993d2 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 5.0E-19 T 28-03-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20945 db0f23d854db8ad77d704d80793993d2 1400 SUPERFAMILY SSF64484 1133 1362 0.0 T 28-03-2018 AL549_RS20945 db0f23d854db8ad77d704d80793993d2 1400 SUPERFAMILY SSF64484 16 944 0.0 T 28-03-2018 AL549_RS20945 db0f23d854db8ad77d704d80793993d2 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 28-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS20945 db0f23d854db8ad77d704d80793993d2 1400 Gene3D G3DSA:2.40.50.100 907 1008 1.8E-29 T 28-03-2018 AL549_RS20945 db0f23d854db8ad77d704d80793993d2 1400 Gene3D G3DSA:2.40.50.100 1153 1212 9.0E-16 T 28-03-2018 AL549_RS02935 d91b63c7b7b5d85a1b28c93056e487b2 97 SUPERFAMILY SSF54909 1 81 4.47E-24 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL549_RS02935 d91b63c7b7b5d85a1b28c93056e487b2 97 Gene3D G3DSA:3.30.70.100 1 89 2.0E-18 T 28-03-2018 AL549_RS02935 d91b63c7b7b5d85a1b28c93056e487b2 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 2 77 3.0E-17 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AL549_RS20970 7face2d07b57619ca140f782e48a4333 142 SUPERFAMILY SSF54747 3 73 1.07E-30 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal AL549_RS20970 7face2d07b57619ca140f782e48a4333 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 3.0E-64 T 28-03-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20970 7face2d07b57619ca140f782e48a4333 142 SUPERFAMILY SSF46906 68 141 1.03E-23 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AL549_RS20970 7face2d07b57619ca140f782e48a4333 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 6.0E-16 T 28-03-2018 AL549_RS20970 7face2d07b57619ca140f782e48a4333 142 SMART SM00649 9 141 2.1E-81 T 28-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AL549_RS20970 7face2d07b57619ca140f782e48a4333 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.1 T 28-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AL549_RS20970 7face2d07b57619ca140f782e48a4333 142 Gene3D G3DSA:1.10.10.250 73 141 4.6E-21 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AL549_RS20970 7face2d07b57619ca140f782e48a4333 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 2.6E-30 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal AL549_RS20970 7face2d07b57619ca140f782e48a4333 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 28-03-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS20970 7face2d07b57619ca140f782e48a4333 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 9.8E-22 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AL549_RS20970 7face2d07b57619ca140f782e48a4333 142 Gene3D G3DSA:3.30.1550.10 3 72 7.8E-35 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal AL549_RS14070 564d8cd1f22df1fb4cb2317971bde897 80 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 78 3.8E-38 T 28-03-2018 IPR022789 Antitoxin ParD AL549_RS14070 564d8cd1f22df1fb4cb2317971bde897 80 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 71 1.6E-30 T 28-03-2018 IPR022789 Antitoxin ParD AL549_RS14070 564d8cd1f22df1fb4cb2317971bde897 80 Gene3D G3DSA:1.10.1220.10 5 45 5.6E-12 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL549_RS14070 564d8cd1f22df1fb4cb2317971bde897 80 SUPERFAMILY SSF47598 4 46 1.78E-9 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AL549_RS03445 a92e82da85410bb13113a11c6ba8a6d7 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL549_RS03445 a92e82da85410bb13113a11c6ba8a6d7 506 SUPERFAMILY SSF53720 14 497 8.51E-164 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL549_RS03445 a92e82da85410bb13113a11c6ba8a6d7 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 1.6E-167 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL549_RS03445 a92e82da85410bb13113a11c6ba8a6d7 506 Gene3D G3DSA:3.40.605.10 7 280 1.4E-92 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL549_RS03445 a92e82da85410bb13113a11c6ba8a6d7 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL549_RS03445 a92e82da85410bb13113a11c6ba8a6d7 506 Gene3D G3DSA:3.40.309.10 281 480 1.6E-70 T 28-03-2018 AL549_RS16175 1aca3f06de035ce82b2ef02724a644ee 279 Gene3D G3DSA:1.10.10.10 1 79 2.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS16175 1aca3f06de035ce82b2ef02724a644ee 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 5.6E-115 T 28-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AL549_RS16175 1aca3f06de035ce82b2ef02724a644ee 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS16175 1aca3f06de035ce82b2ef02724a644ee 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS16175 1aca3f06de035ce82b2ef02724a644ee 279 SUPERFAMILY SSF46785 12 74 9.23E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS16175 1aca3f06de035ce82b2ef02724a644ee 279 SMART SM00345 12 71 1.6E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS16175 1aca3f06de035ce82b2ef02724a644ee 279 SUPERFAMILY SSF48008 178 270 2.01E-57 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL549_RS16175 1aca3f06de035ce82b2ef02724a644ee 279 SUPERFAMILY SSF48008 79 137 2.01E-57 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL549_RS16175 1aca3f06de035ce82b2ef02724a644ee 279 Gene3D G3DSA:1.20.120.530 80 279 7.6E-18 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL549_RS16175 1aca3f06de035ce82b2ef02724a644ee 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.1E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS16175 1aca3f06de035ce82b2ef02724a644ee 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 138.636 T 28-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AL549_RS16175 1aca3f06de035ce82b2ef02724a644ee 279 Pfam PF07840 FadR C-terminal domain 72 274 6.6E-68 T 28-03-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 AL549_RS00685 b99eae51bfd09fac401fe05ba7b368c4 161 Pfam PF03734 L,D-transpeptidase catalytic domain 25 159 1.1E-16 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AL549_RS00685 b99eae51bfd09fac401fe05ba7b368c4 161 SUPERFAMILY SSF141523 25 159 9.02E-23 T 28-03-2018 AL549_RS00685 b99eae51bfd09fac401fe05ba7b368c4 161 Gene3D G3DSA:2.40.440.10 23 160 4.2E-22 T 28-03-2018 AL549_RS17530 ede9dca7f72529af3a0b9c5ebc438c72 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.4E-25 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL549_RS17530 ede9dca7f72529af3a0b9c5ebc438c72 377 Pfam PF07196 Flagellin hook IN motif 195 249 2.2E-9 T 28-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL549_RS17530 ede9dca7f72529af3a0b9c5ebc438c72 377 Gene3D G3DSA:1.20.1330.10 40 349 2.1E-69 T 28-03-2018 AL549_RS17530 ede9dca7f72529af3a0b9c5ebc438c72 377 SUPERFAMILY SSF64518 1 376 2.09E-97 T 28-03-2018 AL549_RS17530 ede9dca7f72529af3a0b9c5ebc438c72 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.6E-42 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL549_RS17530 ede9dca7f72529af3a0b9c5ebc438c72 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL549_RS17530 ede9dca7f72529af3a0b9c5ebc438c72 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL549_RS17530 ede9dca7f72529af3a0b9c5ebc438c72 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL549_RS13145 6c1897a22ea12bfee4dba184e83f565d 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.1E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS02720 0cacd195e29eb007d756dded0962f688 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 256 1.4E-15 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL549_RS02720 0cacd195e29eb007d756dded0962f688 378 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 367 1.5E-33 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL549_RS02720 0cacd195e29eb007d756dded0962f688 378 Gene3D G3DSA:1.20.1600.10 90 284 5.1E-16 T 28-03-2018 AL549_RS02720 0cacd195e29eb007d756dded0962f688 378 SUPERFAMILY SSF111369 49 251 9.02E-15 T 28-03-2018 AL549_RS02720 0cacd195e29eb007d756dded0962f688 378 Gene3D G3DSA:2.40.50.100 35 89 1.9E-6 T 28-03-2018 AL549_RS05260 76a6e1caf50458578b6b34f4ad76bdd9 629 Pfam PF00672 HAMP domain 304 348 1.6E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS05260 76a6e1caf50458578b6b34f4ad76bdd9 629 Gene3D G3DSA:3.30.450.20 158 275 2.1E-23 T 28-03-2018 AL549_RS05260 76a6e1caf50458578b6b34f4ad76bdd9 629 SMART SM00304 387 454 70.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS05260 76a6e1caf50458578b6b34f4ad76bdd9 629 SMART SM00304 295 352 2.7E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS05260 76a6e1caf50458578b6b34f4ad76bdd9 629 SUPERFAMILY SSF103190 77 177 4.71E-8 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL549_RS05260 76a6e1caf50458578b6b34f4ad76bdd9 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 595 1.4E-42 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS05260 76a6e1caf50458578b6b34f4ad76bdd9 629 SUPERFAMILY SSF58104 320 629 1.57E-76 T 28-03-2018 AL549_RS05260 76a6e1caf50458578b6b34f4ad76bdd9 629 Gene3D G3DSA:3.30.450.20 66 157 3.9E-18 T 28-03-2018 AL549_RS05260 76a6e1caf50458578b6b34f4ad76bdd9 629 SMART SM00283 367 628 8.0E-67 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS05260 76a6e1caf50458578b6b34f4ad76bdd9 629 Gene3D G3DSA:1.10.287.950 408 629 4.1E-49 T 28-03-2018 AL549_RS05260 76a6e1caf50458578b6b34f4ad76bdd9 629 Gene3D G3DSA:1.10.287.950 302 407 2.1E-8 T 28-03-2018 AL549_RS05260 76a6e1caf50458578b6b34f4ad76bdd9 629 Pfam PF02743 Cache domain 39 260 3.3E-25 T 28-03-2018 IPR033479 Double Cache domain 1 AL549_RS01485 2d4793fdb2f1a8a01bbe701f36594420 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 215 1.3E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS01485 2d4793fdb2f1a8a01bbe701f36594420 218 Gene3D G3DSA:3.40.50.2300 1 118 1.9E-32 T 28-03-2018 AL549_RS01485 2d4793fdb2f1a8a01bbe701f36594420 218 SMART SM00448 1 112 1.4E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS01485 2d4793fdb2f1a8a01bbe701f36594420 218 SMART SM00862 145 216 2.3E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS01485 2d4793fdb2f1a8a01bbe701f36594420 218 Pfam PF00072 Response regulator receiver domain 4 112 8.0E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS01485 2d4793fdb2f1a8a01bbe701f36594420 218 SUPERFAMILY SSF52172 1 118 2.42E-35 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS01485 2d4793fdb2f1a8a01bbe701f36594420 218 SUPERFAMILY SSF46894 118 216 1.05E-23 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS01485 2d4793fdb2f1a8a01bbe701f36594420 218 Gene3D G3DSA:1.10.10.10 119 218 4.8E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS19360 201746eaecd0ac75902f5afdde24fef5 168 Pfam PF17283 SprT-like zinc ribbon domain 123 163 2.4E-10 T 28-03-2018 IPR035240 SprT-like, zinc ribbon domain AL549_RS19360 201746eaecd0ac75902f5afdde24fef5 168 Pfam PF10263 SprT-like family 17 117 1.2E-17 T 28-03-2018 IPR006640 SprT-like AL549_RS19360 201746eaecd0ac75902f5afdde24fef5 168 SMART SM00731 14 163 1.3E-56 T 28-03-2018 IPR006640 SprT-like AL549_RS19360 201746eaecd0ac75902f5afdde24fef5 168 Hamap MF_00746 Protein SprT [sprT]. 10 163 42.73 T 28-03-2018 IPR023483 Uncharacterised protein family SprT AL549_RS07175 5bee5e9075f1576ff919134e102219a8 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 1.7E-71 T 28-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AL549_RS07175 5bee5e9075f1576ff919134e102219a8 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 4.8E-139 T 28-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AL549_RS07175 5bee5e9075f1576ff919134e102219a8 402 Pfam PF07670 Nucleoside recognition 90 185 2.1E-7 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL549_RS07175 5bee5e9075f1576ff919134e102219a8 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 7.1E-25 T 28-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AL549_RS09790 be30b87def83392ed57ff1b702d533f2 415 Gene3D G3DSA:3.40.190.10 23 154 1.9E-11 T 28-03-2018 AL549_RS09790 be30b87def83392ed57ff1b702d533f2 415 Pfam PF01547 Bacterial extracellular solute-binding protein 39 291 2.4E-21 T 28-03-2018 IPR006059 Solute-binding family 1 GO:0006810 AL549_RS09790 be30b87def83392ed57ff1b702d533f2 415 SUPERFAMILY SSF53850 20 414 1.79E-63 T 28-03-2018 AL549_RS09790 be30b87def83392ed57ff1b702d533f2 415 Gene3D G3DSA:3.40.190.10 155 415 2.6E-32 T 28-03-2018 AL549_RS12765 a72d650232c1a1261d587cb154a9e677 320 Gene3D G3DSA:3.30.450.20 13 148 1.1E-11 T 28-03-2018 AL549_RS12765 a72d650232c1a1261d587cb154a9e677 320 SUPERFAMILY SSF55785 14 95 6.98E-9 T 28-03-2018 IPR000014 PAS domain AL549_RS12765 a72d650232c1a1261d587cb154a9e677 320 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 155 318 1.6E-51 T 28-03-2018 IPR000160 GGDEF domain AL549_RS12765 a72d650232c1a1261d587cb154a9e677 320 Gene3D G3DSA:3.30.70.270 149 319 2.9E-52 T 28-03-2018 AL549_RS12765 a72d650232c1a1261d587cb154a9e677 320 SUPERFAMILY SSF55073 162 318 1.73E-48 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS12765 a72d650232c1a1261d587cb154a9e677 320 SMART SM00267 146 318 8.5E-53 T 28-03-2018 IPR000160 GGDEF domain AL549_RS12765 a72d650232c1a1261d587cb154a9e677 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 159 314 3.7E-42 T 28-03-2018 IPR000160 GGDEF domain AL549_RS10275 a62c50e0d8e682f3b8e672aa4200903a 211 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 194 27.244 T 28-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AL549_RS10275 a62c50e0d8e682f3b8e672aa4200903a 211 PIRSF PIRSF006091 1 205 5.0E-78 T 28-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AL549_RS10275 a62c50e0d8e682f3b8e672aa4200903a 211 Pfam PF04205 FMN-binding domain 100 188 2.7E-18 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL549_RS10275 a62c50e0d8e682f3b8e672aa4200903a 211 SMART SM00900 100 192 2.4E-33 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL549_RS10275 a62c50e0d8e682f3b8e672aa4200903a 211 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 2.2E-64 T 28-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AL549_RS20280 296911a542d8594d3417f249a43a4767 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 1.1E-12 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL549_RS23205 53cb1432ef5b20470731faa13e159d32 144 SUPERFAMILY SSF52080 4 143 4.71E-46 T 28-03-2018 IPR021131 Ribosomal protein L18e/L15P AL549_RS23205 53cb1432ef5b20470731faa13e159d32 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 3.2E-31 T 28-03-2018 IPR021131 Ribosomal protein L18e/L15P AL549_RS23205 53cb1432ef5b20470731faa13e159d32 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 5.6E-51 T 28-03-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23205 53cb1432ef5b20470731faa13e159d32 144 Gene3D G3DSA:3.100.10.10 40 144 9.6E-24 T 28-03-2018 AL549_RS23205 53cb1432ef5b20470731faa13e159d32 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 28-03-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23205 53cb1432ef5b20470731faa13e159d32 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.018 T 28-03-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AL549_RS01305 8277b4e22ff62b1db4cc20402438d29f 322 Gene3D G3DSA:3.30.450.40 12 155 4.2E-23 T 28-03-2018 IPR029016 GAF domain-like AL549_RS01305 8277b4e22ff62b1db4cc20402438d29f 322 SMART SM00267 151 318 8.3E-40 T 28-03-2018 IPR000160 GGDEF domain AL549_RS01305 8277b4e22ff62b1db4cc20402438d29f 322 SUPERFAMILY SSF55073 169 318 2.98E-39 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS01305 8277b4e22ff62b1db4cc20402438d29f 322 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 162 318 1.9E-36 T 28-03-2018 IPR000160 GGDEF domain AL549_RS01305 8277b4e22ff62b1db4cc20402438d29f 322 Pfam PF01590 GAF domain 28 154 5.6E-11 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL549_RS01305 8277b4e22ff62b1db4cc20402438d29f 322 SUPERFAMILY SSF55781 28 158 3.71E-27 T 28-03-2018 IPR029016 GAF domain-like AL549_RS01305 8277b4e22ff62b1db4cc20402438d29f 322 Gene3D G3DSA:3.30.70.270 156 321 5.1E-45 T 28-03-2018 AL549_RS01305 8277b4e22ff62b1db4cc20402438d29f 322 SMART SM00065 26 168 3.8E-12 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL549_RS01305 8277b4e22ff62b1db4cc20402438d29f 322 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 318 3.0E-37 T 28-03-2018 IPR000160 GGDEF domain AL549_RS22500 49a00ea29d6e5fc0346a3e941e022f93 234 Gene3D G3DSA:3.55.40.10 73 234 1.6E-39 T 28-03-2018 AL549_RS22500 49a00ea29d6e5fc0346a3e941e022f93 234 SUPERFAMILY SSF54523 46 124 1.41E-7 T 28-03-2018 AL549_RS22500 49a00ea29d6e5fc0346a3e941e022f93 234 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 44 64 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS22500 49a00ea29d6e5fc0346a3e941e022f93 234 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 44 66 5.5E-4 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS22500 49a00ea29d6e5fc0346a3e941e022f93 234 PRINTS PR00885 Bacterial general secretion pathway protein H signature 56 70 2.3E-21 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL549_RS22500 49a00ea29d6e5fc0346a3e941e022f93 234 PRINTS PR00885 Bacterial general secretion pathway protein H signature 182 197 2.3E-21 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL549_RS22500 49a00ea29d6e5fc0346a3e941e022f93 234 PRINTS PR00885 Bacterial general secretion pathway protein H signature 41 55 2.3E-21 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL549_RS22500 49a00ea29d6e5fc0346a3e941e022f93 234 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 42 220 2.2E-16 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL549_RS22500 49a00ea29d6e5fc0346a3e941e022f93 234 Pfam PF12019 Type II transport protein GspH 81 219 1.1E-10 T 28-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AL549_RS12115 4caa925fe45f0b7f36fb891d4aef954a 286 Gene3D G3DSA:3.30.70.20 260 285 3.3E-5 T 28-03-2018 AL549_RS12115 4caa925fe45f0b7f36fb891d4aef954a 286 Gene3D G3DSA:3.30.70.20 232 259 3.7E-9 T 28-03-2018 AL549_RS12115 4caa925fe45f0b7f36fb891d4aef954a 286 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 257 268 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS12115 4caa925fe45f0b7f36fb891d4aef954a 286 Pfam PF12801 4Fe-4S binding domain 174 211 1.9E-4 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS12115 4caa925fe45f0b7f36fb891d4aef954a 286 Pfam PF12801 4Fe-4S binding domain 82 127 1.3E-12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS12115 4caa925fe45f0b7f36fb891d4aef954a 286 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 25 275 4.8E-117 T 28-03-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 AL549_RS12115 4caa925fe45f0b7f36fb891d4aef954a 286 Pfam PF13187 4Fe-4S dicluster domain 224 270 9.6E-7 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS12115 4caa925fe45f0b7f36fb891d4aef954a 286 Gene3D G3DSA:3.30.70.20 194 231 2.1E-6 T 28-03-2018 AL549_RS12115 4caa925fe45f0b7f36fb891d4aef954a 286 SUPERFAMILY SSF54862 93 115 8.37E-21 T 28-03-2018 AL549_RS12115 4caa925fe45f0b7f36fb891d4aef954a 286 SUPERFAMILY SSF54862 152 283 8.37E-21 T 28-03-2018 AL549_RS09760 de0f1833b8b1e838df732c0c53ba544e 1005 SUPERFAMILY SSF55486 283 356 7.33E-5 T 28-03-2018 AL549_RS09760 de0f1833b8b1e838df732c0c53ba544e 1005 Pfam PF05547 Immune inhibitor A peptidase M6 172 377 6.0E-12 T 28-03-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 AL549_RS09760 de0f1833b8b1e838df732c0c53ba544e 1005 Gene3D G3DSA:3.40.1850.10 793 881 3.5E-16 T 28-03-2018 AL549_RS09760 de0f1833b8b1e838df732c0c53ba544e 1005 ProSitePatterns PS00018 EF-hand calcium-binding domain. 245 257 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site AL549_RS09760 de0f1833b8b1e838df732c0c53ba544e 1005 PIRSF PIRSF036597 1 1002 0.0 T 28-03-2018 IPR012045 Peptidase M6, unassigned InhA-related AL549_RS09760 de0f1833b8b1e838df732c0c53ba544e 1005 Gene3D G3DSA:2.60.500.10 882 973 3.8E-15 T 28-03-2018 AL549_RS09760 de0f1833b8b1e838df732c0c53ba544e 1005 Gene3D G3DSA:2.60.120.640 695 792 5.6E-7 T 28-03-2018 AL549_RS09760 de0f1833b8b1e838df732c0c53ba544e 1005 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 148 433 2.5E-73 T 28-03-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 AL549_RS09760 de0f1833b8b1e838df732c0c53ba544e 1005 SUPERFAMILY SSF49299 779 877 3.92E-5 T 28-03-2018 IPR000601 PKD domain AL549_RS03870 a9bfabb37b0fae09d4a992b0ac12bf5c 234 SUPERFAMILY SSF52172 4 124 1.71E-32 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS03870 a9bfabb37b0fae09d4a992b0ac12bf5c 234 Pfam PF00072 Response regulator receiver domain 6 114 3.6E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS03870 a9bfabb37b0fae09d4a992b0ac12bf5c 234 Gene3D G3DSA:1.10.10.10 128 234 3.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03870 a9bfabb37b0fae09d4a992b0ac12bf5c 234 SUPERFAMILY SSF46894 139 231 8.04E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS03870 a9bfabb37b0fae09d4a992b0ac12bf5c 234 Gene3D G3DSA:3.40.50.2300 2 127 5.6E-29 T 28-03-2018 AL549_RS03870 a9bfabb37b0fae09d4a992b0ac12bf5c 234 SMART SM00862 154 230 2.8E-15 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS03870 a9bfabb37b0fae09d4a992b0ac12bf5c 234 SMART SM00448 4 114 9.7E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS03870 a9bfabb37b0fae09d4a992b0ac12bf5c 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 1.6E-16 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS20500 1c00fbddd5c808ec6330cf61f822410a 315 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 308 29.769 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AL549_RS20500 1c00fbddd5c808ec6330cf61f822410a 315 Gene3D G3DSA:3.40.50.300 5 199 2.6E-62 T 28-03-2018 AL549_RS20500 1c00fbddd5c808ec6330cf61f822410a 315 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 6.0E-116 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AL549_RS20500 1c00fbddd5c808ec6330cf61f822410a 315 Pfam PF01715 IPP transferase 42 286 1.5E-86 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AL549_RS20500 1c00fbddd5c808ec6330cf61f822410a 315 Gene3D G3DSA:1.10.287.890 203 285 2.2E-25 T 28-03-2018 AL549_RS20500 1c00fbddd5c808ec6330cf61f822410a 315 SUPERFAMILY SSF52540 10 153 4.85E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20405 2f3c1a2c3c975da9290b7f0a232f91ab 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 1.2E-132 T 28-03-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AL549_RS20405 2f3c1a2c3c975da9290b7f0a232f91ab 339 SUPERFAMILY SSF55729 1 338 4.06E-130 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS20405 2f3c1a2c3c975da9290b7f0a232f91ab 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 1.0E-130 T 28-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AL549_RS20405 2f3c1a2c3c975da9290b7f0a232f91ab 339 Gene3D G3DSA:3.40.630.30 1 276 1.1E-19 T 28-03-2018 AL549_RS20405 2f3c1a2c3c975da9290b7f0a232f91ab 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 338 2.3E-140 T 28-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AL549_RS20405 2f3c1a2c3c975da9290b7f0a232f91ab 339 Gene3D G3DSA:2.40.40.20 277 338 1.5E-17 T 28-03-2018 AL549_RS09245 8c3bcc11dc41d99dbdb580e0e6a98eb5 311 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 303 4.3E-86 T 28-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 AL549_RS09245 8c3bcc11dc41d99dbdb580e0e6a98eb5 311 SMART SM00771 173 303 6.6E-70 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL549_RS09245 8c3bcc11dc41d99dbdb580e0e6a98eb5 311 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 175 302 1.9E-46 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL549_RS09245 8c3bcc11dc41d99dbdb580e0e6a98eb5 311 SUPERFAMILY SSF64383 175 307 3.27E-48 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL549_RS09245 8c3bcc11dc41d99dbdb580e0e6a98eb5 311 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 176 311 1.0E-77 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL549_RS09245 8c3bcc11dc41d99dbdb580e0e6a98eb5 311 Gene3D G3DSA:3.30.1400.10 175 306 9.5E-50 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL549_RS09245 8c3bcc11dc41d99dbdb580e0e6a98eb5 311 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 305 22.228 T 28-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 AL549_RS12110 8bf771ed628765c502875238b2f57357 257 Gene3D G3DSA:3.30.70.20 150 197 8.3E-10 T 28-03-2018 AL549_RS12110 8bf771ed628765c502875238b2f57357 257 SUPERFAMILY SSF54862 65 214 2.46E-27 T 28-03-2018 AL549_RS12110 8bf771ed628765c502875238b2f57357 257 Gene3D G3DSA:3.30.70.20 74 109 5.4E-9 T 28-03-2018 AL549_RS12110 8bf771ed628765c502875238b2f57357 257 Gene3D G3DSA:3.30.70.20 110 149 7.7E-8 T 28-03-2018 AL549_RS12110 8bf771ed628765c502875238b2f57357 257 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 12 221 1.2E-75 T 28-03-2018 IPR004494 MauM/NapG ferredoxin-type protein AL549_RS12110 8bf771ed628765c502875238b2f57357 257 Gene3D G3DSA:3.30.70.20 198 248 6.6E-5 T 28-03-2018 AL549_RS12110 8bf771ed628765c502875238b2f57357 257 Pfam PF12838 4Fe-4S dicluster domain 151 204 1.4E-6 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS12110 8bf771ed628765c502875238b2f57357 257 Pfam PF12838 4Fe-4S dicluster domain 65 120 6.8E-8 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS12110 8bf771ed628765c502875238b2f57357 257 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 66 77 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS12110 8bf771ed628765c502875238b2f57357 257 Gene3D G3DSA:3.30.70.20 30 73 4.8E-6 T 28-03-2018 AL549_RS20225 73a7ad11873721809ff42f068a678bba 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.57 T 28-03-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AL549_RS20225 73a7ad11873721809ff42f068a678bba 305 PIRSF PIRSF005355 1 303 1.2E-82 T 28-03-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 AL549_RS20225 73a7ad11873721809ff42f068a678bba 305 Pfam PF01040 UbiA prenyltransferase family 21 275 4.8E-38 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AL549_RS20225 73a7ad11873721809ff42f068a678bba 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 295 1.7E-97 T 28-03-2018 AL549_RS10455 57f037d1d48feb0def2e6687f93f9768 236 Gene3D G3DSA:2.150.10.10 85 225 1.8E-19 T 28-03-2018 AL549_RS10455 57f037d1d48feb0def2e6687f93f9768 236 Gene3D G3DSA:2.150.10.10 1 84 5.3E-19 T 28-03-2018 AL549_RS10455 57f037d1d48feb0def2e6687f93f9768 236 PRINTS PR00313 NodO calcium binding signature 88 96 2.3E-12 T 28-03-2018 AL549_RS10455 57f037d1d48feb0def2e6687f93f9768 236 PRINTS PR00313 NodO calcium binding signature 106 114 2.3E-12 T 28-03-2018 AL549_RS10455 57f037d1d48feb0def2e6687f93f9768 236 PRINTS PR00313 NodO calcium binding signature 124 133 2.3E-12 T 28-03-2018 AL549_RS10455 57f037d1d48feb0def2e6687f93f9768 236 PRINTS PR00313 NodO calcium binding signature 67 78 2.3E-12 T 28-03-2018 AL549_RS10455 57f037d1d48feb0def2e6687f93f9768 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 75 93 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL549_RS10455 57f037d1d48feb0def2e6687f93f9768 236 SUPERFAMILY SSF51120 11 208 2.7E-28 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL549_RS10455 57f037d1d48feb0def2e6687f93f9768 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 57 75 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL549_RS10455 57f037d1d48feb0def2e6687f93f9768 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 99 113 0.021 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL549_RS10455 57f037d1d48feb0def2e6687f93f9768 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 27 40 48.0 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL549_RS10455 57f037d1d48feb0def2e6687f93f9768 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 79 95 2.6E-4 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL549_RS10455 57f037d1d48feb0def2e6687f93f9768 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 45 59 0.0056 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL549_RS10455 57f037d1d48feb0def2e6687f93f9768 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 61 77 5.3E-4 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL549_RS10455 57f037d1d48feb0def2e6687f93f9768 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 66 84 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL549_RS19150 1f0c819ea154bbe1d5ef50e6f3c0732e 741 SUPERFAMILY SSF81301 195 407 8.66E-63 T 28-03-2018 AL549_RS19150 1f0c819ea154bbe1d5ef50e6f3c0732e 741 Gene3D G3DSA:3.30.460.10 207 340 1.5E-43 T 28-03-2018 AL549_RS19150 1f0c819ea154bbe1d5ef50e6f3c0732e 741 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 739 9.0E-185 T 28-03-2018 IPR004811 RelA/SpoT family GO:0015969 AL549_RS19150 1f0c819ea154bbe1d5ef50e6f3c0732e 741 SUPERFAMILY SSF109604 37 205 1.35E-41 T 28-03-2018 AL549_RS19150 1f0c819ea154bbe1d5ef50e6f3c0732e 741 SUPERFAMILY SSF81271 396 462 1.07E-20 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL549_RS19150 1f0c819ea154bbe1d5ef50e6f3c0732e 741 SUPERFAMILY SSF55021 664 739 8.74E-10 T 28-03-2018 AL549_RS19150 1f0c819ea154bbe1d5ef50e6f3c0732e 741 SMART SM00954 250 360 4.7E-64 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 AL549_RS19150 1f0c819ea154bbe1d5ef50e6f3c0732e 741 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 2.3E-36 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 AL549_RS19150 1f0c819ea154bbe1d5ef50e6f3c0732e 741 Gene3D G3DSA:3.30.70.260 661 741 4.1E-8 T 28-03-2018 AL549_RS19150 1f0c819ea154bbe1d5ef50e6f3c0732e 741 Pfam PF13291 ACT domain 663 739 3.1E-14 T 28-03-2018 IPR002912 ACT domain AL549_RS19150 1f0c819ea154bbe1d5ef50e6f3c0732e 741 Pfam PF02824 TGS domain 403 462 1.7E-21 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AL549_RS19150 1f0c819ea154bbe1d5ef50e6f3c0732e 741 Gene3D G3DSA:3.10.20.30 397 472 7.1E-23 T 28-03-2018 IPR012675 Beta-grasp domain AL549_RS19150 1f0c819ea154bbe1d5ef50e6f3c0732e 741 Pfam PF13328 HD domain 52 190 4.3E-35 T 28-03-2018 IPR003607 HD/PDEase domain AL549_RS03610 780865c55ebe143e8f84a07c48e4e434 545 Gene3D G3DSA:2.30.38.10 362 437 9.5E-19 T 28-03-2018 AL549_RS03610 780865c55ebe143e8f84a07c48e4e434 545 SUPERFAMILY SSF56801 11 540 1.19E-133 T 28-03-2018 AL549_RS03610 780865c55ebe143e8f84a07c48e4e434 545 Gene3D G3DSA:3.30.300.30 438 543 1.3E-24 T 28-03-2018 AL549_RS03610 780865c55ebe143e8f84a07c48e4e434 545 Pfam PF00501 AMP-binding enzyme 39 443 6.4E-77 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL549_RS03610 780865c55ebe143e8f84a07c48e4e434 545 Gene3D G3DSA:3.40.50.980 199 353 9.5E-32 T 28-03-2018 AL549_RS03610 780865c55ebe143e8f84a07c48e4e434 545 ProSitePatterns PS00455 Putative AMP-binding domain signature. 195 206 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL549_RS03610 780865c55ebe143e8f84a07c48e4e434 545 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 7 535 8.8E-245 T 28-03-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 AL549_RS03610 780865c55ebe143e8f84a07c48e4e434 545 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 528 6.4E-12 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL549_RS03610 780865c55ebe143e8f84a07c48e4e434 545 Gene3D G3DSA:3.40.50.980 27 198 4.7E-29 T 28-03-2018 AL549_RS16815 7b6a346ccea0ff071df3b0ea4637e27b 59 Pfam PF03966 Trm112p-like protein 2 41 3.1E-11 T 28-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 AL549_RS16815 7b6a346ccea0ff071df3b0ea4637e27b 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.232 T 28-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 AL549_RS16815 7b6a346ccea0ff071df3b0ea4637e27b 59 Gene3D G3DSA:2.20.25.10 8 59 1.4E-19 T 28-03-2018 AL549_RS16815 7b6a346ccea0ff071df3b0ea4637e27b 59 SUPERFAMILY SSF158997 1 53 3.27E-20 T 28-03-2018 AL549_RS06670 7a232efe52ef12a003d7c1b1957b2796 306 Hamap MF_01987 Ribokinase [rbsK]. 2 301 25.925 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AL549_RS06670 7a232efe52ef12a003d7c1b1957b2796 306 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 299 1.3E-110 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AL549_RS06670 7a232efe52ef12a003d7c1b1957b2796 306 Gene3D G3DSA:3.40.1190.20 1 306 1.1E-84 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS06670 7a232efe52ef12a003d7c1b1957b2796 306 Pfam PF00294 pfkB family carbohydrate kinase 1 294 4.7E-75 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AL549_RS06670 7a232efe52ef12a003d7c1b1957b2796 306 PRINTS PR00990 Ribokinase signature 217 228 2.4E-36 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL549_RS06670 7a232efe52ef12a003d7c1b1957b2796 306 PRINTS PR00990 Ribokinase signature 6 27 2.4E-36 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL549_RS06670 7a232efe52ef12a003d7c1b1957b2796 306 PRINTS PR00990 Ribokinase signature 33 52 2.4E-36 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL549_RS06670 7a232efe52ef12a003d7c1b1957b2796 306 PRINTS PR00990 Ribokinase signature 173 188 2.4E-36 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL549_RS06670 7a232efe52ef12a003d7c1b1957b2796 306 PRINTS PR00990 Ribokinase signature 105 118 2.4E-36 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL549_RS06670 7a232efe52ef12a003d7c1b1957b2796 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL549_RS06670 7a232efe52ef12a003d7c1b1957b2796 306 SUPERFAMILY SSF53613 1 302 3.43E-84 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS08475 e5c1f6dc4a4575d7a59c86040e9274d4 392 Gene3D G3DSA:2.40.160.10 12 384 7.2E-40 T 28-03-2018 AL549_RS08475 e5c1f6dc4a4575d7a59c86040e9274d4 392 SUPERFAMILY SSF56935 49 384 3.3E-17 T 28-03-2018 AL549_RS17625 8e6bed86bf8fb1f41e4614bccb90bf1a 116 Gene3D G3DSA:3.40.30.10 1 116 1.0E-36 T 28-03-2018 AL549_RS17625 8e6bed86bf8fb1f41e4614bccb90bf1a 116 SUPERFAMILY SSF52833 2 116 3.17E-36 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS17625 8e6bed86bf8fb1f41e4614bccb90bf1a 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 1.3E-46 T 28-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AL549_RS17625 8e6bed86bf8fb1f41e4614bccb90bf1a 116 Pfam PF03960 ArsC family 6 115 1.4E-19 T 28-03-2018 IPR006660 Arsenate reductase-like AL549_RS01065 3ab1b08dd06eddada98c8057f2fd8766 573 Pfam PF12793 Sugar transport-related sRNA regulator N-term 20 101 4.1E-15 T 28-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AL549_RS01065 3ab1b08dd06eddada98c8057f2fd8766 573 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 175 306 1.9E-15 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL549_RS01065 3ab1b08dd06eddada98c8057f2fd8766 573 Gene3D G3DSA:3.10.105.10 392 542 1.9E-4 T 28-03-2018 AL549_RS01065 3ab1b08dd06eddada98c8057f2fd8766 573 Gene3D G3DSA:3.90.76.10 129 254 2.0E-16 T 28-03-2018 AL549_RS01065 3ab1b08dd06eddada98c8057f2fd8766 573 SUPERFAMILY SSF53850 117 567 7.42E-45 T 28-03-2018 AL549_RS01065 3ab1b08dd06eddada98c8057f2fd8766 573 Gene3D G3DSA:3.40.190.10 255 358 7.3E-4 T 28-03-2018 AL549_RS20270 697a9c4ac92a33935241abd3528b3e3e 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 9.8E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS20270 697a9c4ac92a33935241abd3528b3e3e 336 SUPERFAMILY SSF51735 1 335 2.55E-97 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS20270 697a9c4ac92a33935241abd3528b3e3e 336 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 2.7E-141 T 28-03-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-70370 AL549_RS20270 697a9c4ac92a33935241abd3528b3e3e 336 Gene3D G3DSA:3.90.25.10 207 253 2.4E-10 T 28-03-2018 AL549_RS20270 697a9c4ac92a33935241abd3528b3e3e 336 Gene3D G3DSA:3.90.25.10 254 336 6.6E-24 T 28-03-2018 AL549_RS20270 697a9c4ac92a33935241abd3528b3e3e 336 Gene3D G3DSA:3.40.50.720 1 206 2.5E-36 T 28-03-2018 AL549_RS10150 e4cecda0e96b7252f4d69af8215b7934 220 Pfam PF02080 TrkA-C domain 154 214 1.0E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS10150 e4cecda0e96b7252f4d69af8215b7934 220 Pfam PF02254 TrkA-N domain 8 123 4.2E-27 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL549_RS10150 e4cecda0e96b7252f4d69af8215b7934 220 Gene3D G3DSA:3.30.70.1450 141 219 1.4E-15 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS10150 e4cecda0e96b7252f4d69af8215b7934 220 SUPERFAMILY SSF116726 134 215 3.79E-15 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS10150 e4cecda0e96b7252f4d69af8215b7934 220 Gene3D G3DSA:3.40.50.720 1 140 9.6E-22 T 28-03-2018 AL549_RS10150 e4cecda0e96b7252f4d69af8215b7934 220 SUPERFAMILY SSF51735 6 136 4.31E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS02180 20da59d58999bf3e43ca33f771a4e307 246 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 217 4.4E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS02180 20da59d58999bf3e43ca33f771a4e307 246 Pfam PF08448 PAS fold 17 128 1.1E-23 T 28-03-2018 IPR013656 PAS fold-4 AL549_RS02180 20da59d58999bf3e43ca33f771a4e307 246 Gene3D G3DSA:3.30.450.20 14 167 7.6E-7 T 28-03-2018 AL549_RS02180 20da59d58999bf3e43ca33f771a4e307 246 Gene3D G3DSA:1.10.10.10 168 222 6.9E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02180 20da59d58999bf3e43ca33f771a4e307 246 SMART SM00421 160 217 5.0E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS02180 20da59d58999bf3e43ca33f771a4e307 246 SUPERFAMILY SSF55785 16 127 1.56E-8 T 28-03-2018 IPR000014 PAS domain AL549_RS02180 20da59d58999bf3e43ca33f771a4e307 246 SUPERFAMILY SSF46894 156 222 4.76E-14 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS02180 20da59d58999bf3e43ca33f771a4e307 246 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 193 1.5E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS02180 20da59d58999bf3e43ca33f771a4e307 246 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 205 1.5E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS02180 20da59d58999bf3e43ca33f771a4e307 246 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 177 1.5E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS03590 96587d4c50ae9c4da19b41682bb3afce 542 Gene3D G3DSA:3.30.300.30 441 539 8.5E-20 T 28-03-2018 AL549_RS03590 96587d4c50ae9c4da19b41682bb3afce 542 Gene3D G3DSA:3.40.50.980 35 197 5.7E-29 T 28-03-2018 AL549_RS03590 96587d4c50ae9c4da19b41682bb3afce 542 SUPERFAMILY SSF56801 26 537 1.02E-123 T 28-03-2018 AL549_RS03590 96587d4c50ae9c4da19b41682bb3afce 542 Gene3D G3DSA:2.30.38.10 363 440 1.5E-20 T 28-03-2018 AL549_RS03590 96587d4c50ae9c4da19b41682bb3afce 542 Pfam PF00501 AMP-binding enzyme 45 446 4.3E-80 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL549_RS03590 96587d4c50ae9c4da19b41682bb3afce 542 Gene3D G3DSA:3.40.50.980 198 352 3.6E-32 T 28-03-2018 AL549_RS03590 96587d4c50ae9c4da19b41682bb3afce 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 530 5.3E-13 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL549_RS01370 a6bc8d5d0026516f86d86f9144cfc086 289 Pfam PF12833 Helix-turn-helix domain 207 286 2.9E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS01370 a6bc8d5d0026516f86d86f9144cfc086 289 SUPERFAMILY SSF46689 240 287 2.58E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS01370 a6bc8d5d0026516f86d86f9144cfc086 289 Pfam PF02311 AraC-like ligand binding domain 22 164 2.8E-8 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL549_RS01370 a6bc8d5d0026516f86d86f9144cfc086 289 Gene3D G3DSA:1.10.10.60 235 289 2.9E-13 T 28-03-2018 AL549_RS01370 a6bc8d5d0026516f86d86f9144cfc086 289 SMART SM00342 201 285 8.2E-27 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS01370 a6bc8d5d0026516f86d86f9144cfc086 289 Gene3D G3DSA:2.60.120.280 1 175 1.9E-25 T 28-03-2018 AL549_RS01370 a6bc8d5d0026516f86d86f9144cfc086 289 SUPERFAMILY SSF46689 186 235 7.89E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS01370 a6bc8d5d0026516f86d86f9144cfc086 289 SUPERFAMILY SSF51215 27 171 1.18E-15 T 28-03-2018 AL549_RS01370 a6bc8d5d0026516f86d86f9144cfc086 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 269 4.0E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS01370 a6bc8d5d0026516f86d86f9144cfc086 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 285 4.0E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS01370 a6bc8d5d0026516f86d86f9144cfc086 289 Gene3D G3DSA:1.10.10.60 184 234 9.1E-7 T 28-03-2018 AL549_RS22340 872cc9814b77e3d5908f8574bbfb4617 130 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 127 18.098 T 28-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AL549_RS22340 872cc9814b77e3d5908f8574bbfb4617 130 Pfam PF02416 mttA/Hcf106 family 4 32 1.9E-5 T 28-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AL549_RS22340 872cc9814b77e3d5908f8574bbfb4617 130 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 5.6E-33 T 28-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AL549_RS22340 872cc9814b77e3d5908f8574bbfb4617 130 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.3E-27 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AL549_RS22340 872cc9814b77e3d5908f8574bbfb4617 130 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.3E-27 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AL549_RS22340 872cc9814b77e3d5908f8574bbfb4617 130 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.3E-27 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AL549_RS20070 2f8b5ee5bd94712bb9fa798b2e5fe48b 222 SUPERFAMILY SSF51366 4 218 1.35E-77 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL549_RS20070 2f8b5ee5bd94712bb9fa798b2e5fe48b 222 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 9.3E-100 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL549_RS20070 2f8b5ee5bd94712bb9fa798b2e5fe48b 222 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL549_RS20070 2f8b5ee5bd94712bb9fa798b2e5fe48b 222 PIRSF PIRSF001461 1 222 4.3E-106 T 28-03-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL549_RS20070 2f8b5ee5bd94712bb9fa798b2e5fe48b 222 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL549_RS20070 2f8b5ee5bd94712bb9fa798b2e5fe48b 222 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.2E-91 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL549_RS20070 2f8b5ee5bd94712bb9fa798b2e5fe48b 222 Gene3D G3DSA:3.20.20.70 1 220 6.3E-89 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS01200 12fb7c630ab58b223d845211455841e6 510 Hamap MF_01314 Anaerobic nitric oxide reductase transcription regulator NorR [norR]. 1 510 62.382 T 28-03-2018 IPR023944 Anaerobic nitric oxide reductase transcription regulator GO:0003700|GO:0006355 AL549_RS01200 12fb7c630ab58b223d845211455841e6 510 SUPERFAMILY SSF55781 7 167 1.46E-17 T 28-03-2018 IPR029016 GAF domain-like AL549_RS01200 12fb7c630ab58b223d845211455841e6 510 Pfam PF01590 GAF domain 22 154 1.8E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL549_RS01200 12fb7c630ab58b223d845211455841e6 510 Pfam PF00158 Sigma-54 interaction domain 188 354 1.2E-67 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL549_RS01200 12fb7c630ab58b223d845211455841e6 510 Gene3D G3DSA:3.40.50.300 186 360 5.3E-29 T 28-03-2018 AL549_RS01200 12fb7c630ab58b223d845211455841e6 510 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 274 289 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL549_RS01200 12fb7c630ab58b223d845211455841e6 510 Gene3D G3DSA:1.10.10.60 422 510 6.7E-10 T 28-03-2018 AL549_RS01200 12fb7c630ab58b223d845211455841e6 510 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 401 410 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL549_RS01200 12fb7c630ab58b223d845211455841e6 510 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 212 225 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL549_RS01200 12fb7c630ab58b223d845211455841e6 510 SUPERFAMILY SSF46689 461 509 1.43E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS01200 12fb7c630ab58b223d845211455841e6 510 SMART SM00065 20 168 4.3E-11 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL549_RS01200 12fb7c630ab58b223d845211455841e6 510 Gene3D G3DSA:3.30.450.40 4 185 1.2E-19 T 28-03-2018 IPR029016 GAF domain-like AL549_RS01200 12fb7c630ab58b223d845211455841e6 510 SUPERFAMILY SSF52540 187 424 7.57E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS01200 12fb7c630ab58b223d845211455841e6 510 Gene3D G3DSA:1.10.8.60 361 421 7.0E-20 T 28-03-2018 AL549_RS01200 12fb7c630ab58b223d845211455841e6 510 SMART SM00382 208 351 6.7E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS10805 ed5169718d3c1b96c2f7b95da280110a 1024 Pfam PF01336 OB-fold nucleic acid binding domain 934 1003 1.3E-7 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL549_RS10805 ed5169718d3c1b96c2f7b95da280110a 1024 Gene3D G3DSA:2.40.50.140 835 1014 7.8E-10 T 28-03-2018 AL549_RS10805 ed5169718d3c1b96c2f7b95da280110a 1024 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 1.9E-145 T 28-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS10805 ed5169718d3c1b96c2f7b95da280110a 1024 Gene3D G3DSA:3.20.20.140 1 234 2.1E-25 T 28-03-2018 AL549_RS10805 ed5169718d3c1b96c2f7b95da280110a 1024 SMART SM00481 4 73 5.3E-4 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL549_RS10805 ed5169718d3c1b96c2f7b95da280110a 1024 Pfam PF14579 Helix-hairpin-helix motif 768 854 2.0E-11 T 28-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS10805 ed5169718d3c1b96c2f7b95da280110a 1024 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1024 13.53 T 28-03-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS10805 ed5169718d3c1b96c2f7b95da280110a 1024 Pfam PF02811 PHP domain 8 101 4.7E-9 T 28-03-2018 IPR004013 PHP domain GO:0003824 AL549_RS10805 ed5169718d3c1b96c2f7b95da280110a 1024 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 969 3.4E-156 T 28-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS20215 109ce4062f8eb734655306f33f3cbb9f 184 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 2.8E-87 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AL549_RS20215 109ce4062f8eb734655306f33f3cbb9f 184 PIRSF PIRSF039093 1 175 6.9E-88 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AL549_RS20215 109ce4062f8eb734655306f33f3cbb9f 184 SUPERFAMILY SSF56235 2 172 4.27E-58 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL549_RS20215 109ce4062f8eb734655306f33f3cbb9f 184 Gene3D G3DSA:3.60.20.10 2 174 1.7E-31 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL549_RS20215 109ce4062f8eb734655306f33f3cbb9f 184 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.238 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AL549_RS20215 109ce4062f8eb734655306f33f3cbb9f 184 Pfam PF00227 Proteasome subunit 2 170 1.5E-24 T 28-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL549_RS20645 a68ce82ce0910ac51f43298133480ca9 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 1.1E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS20645 a68ce82ce0910ac51f43298133480ca9 211 Gene3D G3DSA:1.10.357.10 2 209 4.5E-31 T 28-03-2018 AL549_RS20645 a68ce82ce0910ac51f43298133480ca9 211 SUPERFAMILY SSF46689 2 72 1.5E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS20645 a68ce82ce0910ac51f43298133480ca9 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 2.7E-42 T 28-03-2018 IPR025722 Bacterial transcriptional repressor TetR AL549_RS20645 a68ce82ce0910ac51f43298133480ca9 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 9.5E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS20645 a68ce82ce0910ac51f43298133480ca9 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 9.5E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS18375 8aa9aa85957ad5b5968abd9b29901b73 242 SMART SM00342 155 239 1.5E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS18375 8aa9aa85957ad5b5968abd9b29901b73 242 SUPERFAMILY SSF46689 140 188 7.17E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS18375 8aa9aa85957ad5b5968abd9b29901b73 242 Gene3D G3DSA:1.10.10.60 209 242 1.2E-12 T 28-03-2018 AL549_RS18375 8aa9aa85957ad5b5968abd9b29901b73 242 Gene3D G3DSA:3.90.1240.10 53 208 3.1E-21 T 28-03-2018 AL549_RS18375 8aa9aa85957ad5b5968abd9b29901b73 242 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 192 235 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL549_RS18375 8aa9aa85957ad5b5968abd9b29901b73 242 SUPERFAMILY SSF46689 192 239 1.84E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS18375 8aa9aa85957ad5b5968abd9b29901b73 242 Pfam PF12833 Helix-turn-helix domain 165 239 8.3E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS18375 8aa9aa85957ad5b5968abd9b29901b73 242 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 208 223 4.4E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS18375 8aa9aa85957ad5b5968abd9b29901b73 242 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 239 4.4E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS03170 006e02680af6c70cba6db8f51f16429c 510 Gene3D G3DSA:3.40.630.30 1 214 9.5E-27 T 28-03-2018 AL549_RS03170 006e02680af6c70cba6db8f51f16429c 510 Pfam PF00583 Acetyltransferase (GNAT) family 48 136 3.0E-6 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS03170 006e02680af6c70cba6db8f51f16429c 510 Gene3D G3DSA:3.60.110.10 215 503 3.4E-53 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL549_RS03170 006e02680af6c70cba6db8f51f16429c 510 SUPERFAMILY SSF56317 221 491 3.01E-60 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL549_RS03170 006e02680af6c70cba6db8f51f16429c 510 Pfam PF00795 Carbon-nitrogen hydrolase 226 485 5.3E-34 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL549_RS03170 006e02680af6c70cba6db8f51f16429c 510 SUPERFAMILY SSF55729 5 139 4.71E-15 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS12705 1ca04f6d2ece2474da4779c41e1c0832 272 Gene3D G3DSA:3.40.190.10 206 272 7.1E-28 T 28-03-2018 AL549_RS12705 1ca04f6d2ece2474da4779c41e1c0832 272 SUPERFAMILY SSF53850 29 257 1.24E-30 T 28-03-2018 AL549_RS12705 1ca04f6d2ece2474da4779c41e1c0832 272 Gene3D G3DSA:3.40.190.10 116 205 3.1E-45 T 28-03-2018 AL549_RS12705 1ca04f6d2ece2474da4779c41e1c0832 272 Gene3D G3DSA:3.40.190.10 23 115 4.2E-14 T 28-03-2018 AL549_RS12705 1ca04f6d2ece2474da4779c41e1c0832 272 Pfam PF12849 PBP superfamily domain 31 247 9.6E-30 T 28-03-2018 IPR024370 PBP domain AL549_RS02260 70cdab8c08e72a13976b704e589f48a9 335 Gene3D G3DSA:1.10.3720.10 7 319 1.9E-28 T 28-03-2018 AL549_RS02260 70cdab8c08e72a13976b704e589f48a9 335 SUPERFAMILY SSF161098 98 311 6.38E-11 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS02260 70cdab8c08e72a13976b704e589f48a9 335 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 328 4.5E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS05660 fa3db7242009b2c10afff9c2a659ee43 93 Pfam PF10115 Transcriptional activator HlyU 2 92 2.6E-39 T 28-03-2018 IPR018772 Transcription activator HlyU AL549_RS21090 c89844ea40f8890c214f1f3212a91ad1 148 SUPERFAMILY SSF54928 44 139 8.46E-27 T 28-03-2018 IPR000504 RNA recognition motif domain GO:0003676 AL549_RS21090 c89844ea40f8890c214f1f3212a91ad1 148 SMART SM00360 62 134 1.1E-20 T 28-03-2018 IPR000504 RNA recognition motif domain GO:0003676 AL549_RS21090 c89844ea40f8890c214f1f3212a91ad1 148 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 63 132 7.8E-18 T 28-03-2018 IPR000504 RNA recognition motif domain GO:0003676 AL549_RS21090 c89844ea40f8890c214f1f3212a91ad1 148 Gene3D G3DSA:3.30.70.330 47 146 1.7E-24 T 28-03-2018 AL549_RS09355 b1439bb291de4bc279bb9f9abd13778f 652 Gene3D G3DSA:1.20.120.570 192 300 0.06 T 28-03-2018 AL549_RS09355 b1439bb291de4bc279bb9f9abd13778f 652 SMART SM00283 389 651 1.3E-77 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS09355 b1439bb291de4bc279bb9f9abd13778f 652 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 434 618 9.9E-47 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS09355 b1439bb291de4bc279bb9f9abd13778f 652 Gene3D G3DSA:1.10.287.950 320 424 1.4E-4 T 28-03-2018 AL549_RS09355 b1439bb291de4bc279bb9f9abd13778f 652 Gene3D G3DSA:1.10.287.950 425 652 1.2E-53 T 28-03-2018 AL549_RS09355 b1439bb291de4bc279bb9f9abd13778f 652 SUPERFAMILY SSF58104 343 652 1.31E-76 T 28-03-2018 AL549_RS09355 b1439bb291de4bc279bb9f9abd13778f 652 SMART SM01358 39 292 6.9E-56 T 28-03-2018 IPR032255 Helical bimodular sensor domain AL549_RS09355 b1439bb291de4bc279bb9f9abd13778f 652 SMART SM00304 321 375 3.8E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS18865 b7a2ac14d2fbba49cfc52206027d0e54 176 SUPERFAMILY SSF53271 3 175 1.31E-54 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AL549_RS18865 b7a2ac14d2fbba49cfc52206027d0e54 176 Pfam PF00156 Phosphoribosyl transferase domain 14 159 4.5E-26 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL549_RS18865 b7a2ac14d2fbba49cfc52206027d0e54 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 2.2E-72 T 28-03-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 AL549_RS18865 b7a2ac14d2fbba49cfc52206027d0e54 176 Gene3D G3DSA:3.40.50.2020 2 176 1.7E-45 T 28-03-2018 AL549_RS06160 381223c4fe4387bfd92c60cf8c71728c 254 Pfam PF01909 Nucleotidyltransferase domain 40 84 1.6E-5 T 28-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AL549_RS06160 381223c4fe4387bfd92c60cf8c71728c 254 Gene3D G3DSA:3.30.460.10 15 142 2.0E-16 T 28-03-2018 AL549_RS06160 381223c4fe4387bfd92c60cf8c71728c 254 SUPERFAMILY SSF81301 16 128 1.67E-13 T 28-03-2018 AL549_RS12775 23b0ba3f7d21423ee962558078b8f4b7 298 PIRSF PIRSF006221 11 298 1.8E-108 T 28-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AL549_RS12775 23b0ba3f7d21423ee962558078b8f4b7 298 Gene3D G3DSA:3.90.1200.10 103 295 3.1E-14 T 28-03-2018 AL549_RS12775 23b0ba3f7d21423ee962558078b8f4b7 298 SUPERFAMILY SSF56112 13 288 8.75E-41 T 28-03-2018 IPR011009 Protein kinase-like domain AL549_RS12775 23b0ba3f7d21423ee962558078b8f4b7 298 Gene3D G3DSA:3.30.200.20 10 102 1.2E-17 T 28-03-2018 AL549_RS12775 23b0ba3f7d21423ee962558078b8f4b7 298 Pfam PF03881 Fructosamine kinase 11 297 4.3E-123 T 28-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AL549_RS05580 84439cb9f078816899ed8ef76ca96a10 398 Pfam PF00155 Aminotransferase class I and II 30 392 4.8E-67 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL549_RS05580 84439cb9f078816899ed8ef76ca96a10 398 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.3E-28 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL549_RS05580 84439cb9f078816899ed8ef76ca96a10 398 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.3E-28 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL549_RS05580 84439cb9f078816899ed8ef76ca96a10 398 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.3E-28 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL549_RS05580 84439cb9f078816899ed8ef76ca96a10 398 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.3E-28 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL549_RS05580 84439cb9f078816899ed8ef76ca96a10 398 Gene3D G3DSA:3.40.640.10 87 255 4.0E-12 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS05580 84439cb9f078816899ed8ef76ca96a10 398 Gene3D G3DSA:3.90.1150.10 3 86 4.8E-13 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS05580 84439cb9f078816899ed8ef76ca96a10 398 Gene3D G3DSA:3.90.1150.10 256 397 9.2E-40 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS05580 84439cb9f078816899ed8ef76ca96a10 398 SUPERFAMILY SSF53383 3 398 5.16E-101 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 1.4E-277 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 Gene3D G3DSA:1.20.1640.10 265 491 2.8E-43 T 28-03-2018 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 Gene3D G3DSA:1.20.1640.10 788 1008 7.8E-42 T 28-03-2018 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 SUPERFAMILY SSF82693 136 181 1.22E-21 T 28-03-2018 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 SUPERFAMILY SSF82693 267 323 1.22E-21 T 28-03-2018 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 SUPERFAMILY SSF82714 701 783 1.96E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.2E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.2E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.2E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 1.2E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.2E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.2E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.2E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 Gene3D G3DSA:3.30.70.1430 40 141 3.1E-25 T 28-03-2018 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 SUPERFAMILY SSF82693 553 650 8.89E-22 T 28-03-2018 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 SUPERFAMILY SSF82714 182 263 4.71E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 SUPERFAMILY SSF82866 782 1008 1.96E-46 T 28-03-2018 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 Gene3D G3DSA:3.30.2090.10 697 786 1.2E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 Gene3D G3DSA:3.30.2090.10 180 264 9.8E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 SUPERFAMILY SSF82866 290 489 5.89E-47 T 28-03-2018 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 SUPERFAMILY SSF82693 41 130 2.25E-23 T 28-03-2018 AL549_RS21575 ff51cd54ae44e17914f6597d8becb187 1039 Gene3D G3DSA:3.30.70.1430 555 650 3.4E-13 T 28-03-2018 AL549_RS03155 ba782b3b359b0a89100373785f2439dc 167 Pfam PF00583 Acetyltransferase (GNAT) family 37 122 9.8E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS03155 ba782b3b359b0a89100373785f2439dc 167 SUPERFAMILY SSF55729 35 143 1.06E-23 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS03155 ba782b3b359b0a89100373785f2439dc 167 Gene3D G3DSA:3.40.630.30 6 153 5.4E-21 T 28-03-2018 AL549_RS20185 4bc42f11129d3d17d58130117abfe0a2 105 Hamap MF_00744 Met repressor [metJ]. 1 105 35.305 T 28-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AL549_RS20185 4bc42f11129d3d17d58130117abfe0a2 105 Gene3D G3DSA:1.10.140.10 3 103 5.2E-59 T 28-03-2018 IPR023453 Methionine repressor MetJ domain AL549_RS20185 4bc42f11129d3d17d58130117abfe0a2 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 1.2E-59 T 28-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AL549_RS20185 4bc42f11129d3d17d58130117abfe0a2 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 5.0E-49 T 28-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AL549_RS20185 4bc42f11129d3d17d58130117abfe0a2 105 SUPERFAMILY SSF47598 3 103 4.0E-57 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AL549_RS13410 55739288c9245730c566ee1a858f1e60 320 Pfam PF11185 Protein of unknown function (DUF2971) 166 257 7.2E-13 T 28-03-2018 IPR021352 Protein of unknown function DUF2971 AL549_RS13410 55739288c9245730c566ee1a858f1e60 320 Pfam PF11665 Protein of unknown function (DUF3265) 37 64 7.0E-8 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS06905 d2042f0de8d54e3358358dcf642696bc 547 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 10 537 1.2E-267 T 28-03-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AL549_RS06905 d2042f0de8d54e3358358dcf642696bc 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 9 21 2.9E-20 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL549_RS06905 d2042f0de8d54e3358358dcf642696bc 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 2.9E-20 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL549_RS06905 d2042f0de8d54e3358358dcf642696bc 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 311 317 2.9E-20 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL549_RS06905 d2042f0de8d54e3358358dcf642696bc 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 32 2.9E-20 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL549_RS06905 d2042f0de8d54e3358358dcf642696bc 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 2.9E-20 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL549_RS06905 d2042f0de8d54e3358358dcf642696bc 547 SUPERFAMILY SSF51905 9 226 1.5E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS06905 d2042f0de8d54e3358358dcf642696bc 547 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL549_RS06905 d2042f0de8d54e3358358dcf642696bc 547 Gene3D G3DSA:3.50.50.60 2 393 2.0E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS06905 d2042f0de8d54e3358358dcf642696bc 547 SUPERFAMILY SSF54373 226 317 4.71E-12 T 28-03-2018 AL549_RS06905 d2042f0de8d54e3358358dcf642696bc 547 Pfam PF01266 FAD dependent oxidoreductase 11 359 2.5E-51 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL549_RS06905 d2042f0de8d54e3358358dcf642696bc 547 Pfam PF04324 BFD-like [2Fe-2S] binding domain 431 482 1.7E-10 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL549_RS22765 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 Gene3D G3DSA:3.40.50.620 2 163 2.5E-36 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS22765 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 SUPERFAMILY SSF52374 8 162 9.65E-46 T 28-03-2018 AL549_RS22765 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 67 2.5E-20 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL549_RS22765 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 7.0E-50 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL549_RS22765 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 7.0E-50 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL549_RS22765 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 7.0E-50 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL549_RS22765 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 7.0E-50 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL549_RS22765 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 7.0E-50 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL549_RS22765 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 35.682 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL549_RS22765 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 9 161 1.3E-59 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL549_RS22765 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 Pfam PF01467 Cytidylyltransferase-like 10 138 1.1E-19 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL549_RS01725 5b1457bba13df45da399333d8ffb9f5f 281 Pfam PF05726 Pirin C-terminal cupin domain 181 279 6.2E-26 T 28-03-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AL549_RS01725 5b1457bba13df45da399333d8ffb9f5f 281 Gene3D G3DSA:2.60.120.10 1 243 1.5E-68 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS01725 5b1457bba13df45da399333d8ffb9f5f 281 SUPERFAMILY SSF51182 8 279 3.46E-72 T 28-03-2018 IPR011051 RmlC-like cupin domain AL549_RS01725 5b1457bba13df45da399333d8ffb9f5f 281 Gene3D G3DSA:2.60.120.10 244 281 1.1E-7 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS01725 5b1457bba13df45da399333d8ffb9f5f 281 PIRSF PIRSF006232 3 281 1.6E-81 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AL549_RS01725 5b1457bba13df45da399333d8ffb9f5f 281 Pfam PF02678 Pirin 31 121 7.0E-33 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AL549_RS01770 b182f1bd533ceea2af8d5a5f1348965f 134 SUPERFAMILY SSF51316 9 131 3.66E-33 T 28-03-2018 IPR011057 Mss4-like AL549_RS01770 b182f1bd533ceea2af8d5a5f1348965f 134 Gene3D G3DSA:3.90.1590.10 9 124 1.6E-21 T 28-03-2018 AL549_RS01770 b182f1bd533ceea2af8d5a5f1348965f 134 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 38 113 6.9E-10 T 28-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AL549_RS07440 d5e2ae1ce539f711d682c6bdf8534ef8 142 Gene3D G3DSA:3.90.1180.10 1 142 9.3E-62 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL549_RS07440 d5e2ae1ce539f711d682c6bdf8534ef8 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.345 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL549_RS07440 d5e2ae1ce539f711d682c6bdf8534ef8 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 1.2E-64 T 28-03-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS07440 d5e2ae1ce539f711d682c6bdf8534ef8 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 28-03-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 AL549_RS07440 d5e2ae1ce539f711d682c6bdf8534ef8 142 PIRSF PIRSF002181 1 142 1.3E-51 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL549_RS07440 d5e2ae1ce539f711d682c6bdf8534ef8 142 SUPERFAMILY SSF52161 1 140 9.42E-60 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL549_RS07440 d5e2ae1ce539f711d682c6bdf8534ef8 142 Pfam PF00572 Ribosomal protein L13 15 138 4.5E-56 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL549_RS04675 1d962d5979a45ec40f17b8c21b454a1e 210 ProSitePatterns PS00194 Thioredoxin family active site. 50 68 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL549_RS04675 1d962d5979a45ec40f17b8c21b454a1e 210 Pfam PF13462 Thioredoxin 50 203 1.4E-8 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS04675 1d962d5979a45ec40f17b8c21b454a1e 210 Gene3D G3DSA:3.40.30.10 25 209 3.2E-22 T 28-03-2018 AL549_RS04675 1d962d5979a45ec40f17b8c21b454a1e 210 SUPERFAMILY SSF52833 28 208 3.74E-27 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS04410 177a80c3b76c55f7c0613e76a6d23f35 591 SMART SM00267 154 328 1.3E-38 T 28-03-2018 IPR000160 GGDEF domain AL549_RS04410 177a80c3b76c55f7c0613e76a6d23f35 591 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 167 326 2.1E-27 T 28-03-2018 IPR000160 GGDEF domain AL549_RS04410 177a80c3b76c55f7c0613e76a6d23f35 591 Pfam PF00990 Diguanylate cyclase, GGDEF domain 168 323 5.9E-33 T 28-03-2018 IPR000160 GGDEF domain AL549_RS04410 177a80c3b76c55f7c0613e76a6d23f35 591 SMART SM00052 338 583 1.6E-103 T 28-03-2018 IPR001633 EAL domain AL549_RS04410 177a80c3b76c55f7c0613e76a6d23f35 591 Gene3D G3DSA:3.20.20.450 337 591 1.0E-94 T 28-03-2018 IPR001633 EAL domain AL549_RS04410 177a80c3b76c55f7c0613e76a6d23f35 591 Pfam PF00563 EAL domain 344 578 1.3E-68 T 28-03-2018 IPR001633 EAL domain AL549_RS04410 177a80c3b76c55f7c0613e76a6d23f35 591 Gene3D G3DSA:3.30.70.270 165 336 9.8E-42 T 28-03-2018 AL549_RS04410 177a80c3b76c55f7c0613e76a6d23f35 591 SUPERFAMILY SSF141868 343 590 1.31E-86 T 28-03-2018 IPR001633 EAL domain AL549_RS04410 177a80c3b76c55f7c0613e76a6d23f35 591 SUPERFAMILY SSF55073 172 330 1.88E-34 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 ProSitePatterns PS01229 Hypothetical cof family signature 2. 660 682 - T 28-03-2018 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 PRINTS PR00941 Cadmium-transporting ATPase signature 85 106 3.5E-6 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 PRINTS PR00941 Cadmium-transporting ATPase signature 250 270 3.5E-6 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 PRINTS PR00941 Cadmium-transporting ATPase signature 350 364 3.5E-6 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 Pfam PF00122 E1-E2 ATPase 267 446 9.3E-48 T 28-03-2018 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 215 527 1.5E-94 T 28-03-2018 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 238 739 1.3E-81 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 SUPERFAMILY SSF55008 73 138 3.67E-13 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 215 762 7.8E-171 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 468 474 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 Gene3D G3DSA:3.30.70.100 55 146 9.6E-15 T 28-03-2018 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 Gene3D G3DSA:3.40.1110.10 487 588 2.3E-19 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 Gene3D G3DSA:1.20.1110.10 213 486 1.7E-29 T 28-03-2018 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 ProSitePatterns PS01047 Heavy-metal-associated domain. 76 105 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 Pfam PF00702 haloacid dehalogenase-like hydrolase 463 673 1.7E-38 T 28-03-2018 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 683 695 9.7E-28 T 28-03-2018 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 466 480 9.7E-28 T 28-03-2018 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 609 619 9.7E-28 T 28-03-2018 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 660 679 9.7E-28 T 28-03-2018 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 587 598 9.7E-28 T 28-03-2018 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 315 329 9.7E-28 T 28-03-2018 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 SUPERFAMILY SSF81653 271 365 1.7E-20 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 Gene3D G3DSA:3.40.50.1000 589 727 9.3E-35 T 28-03-2018 IPR023214 HAD-like domain AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 Pfam PF00403 Heavy-metal-associated domain 76 126 1.1E-9 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 SUPERFAMILY SSF56784 559 760 1.26E-50 T 28-03-2018 IPR023214 HAD-like domain AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 SUPERFAMILY SSF56784 465 484 1.26E-50 T 28-03-2018 IPR023214 HAD-like domain AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 SUPERFAMILY SSF81665 709 748 8.63E-19 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 SUPERFAMILY SSF81665 366 460 8.63E-19 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL549_RS16925 73212901f8e733ec6e3b0c697d5612fc 770 SUPERFAMILY SSF81665 218 269 8.63E-19 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL549_RS22985 dfab83be108296602ff8cdbfd1bc039b 439 Pfam PF01943 Polysaccharide biosynthesis protein 10 276 3.1E-22 T 28-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AL549_RS22985 dfab83be108296602ff8cdbfd1bc039b 439 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 329 415 2.2E-12 T 28-03-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 SUPERFAMILY SSF55874 5 215 8.75E-66 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.928 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.8E-123 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 1.8E-123 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 1.8E-123 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 1.8E-123 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 1.8E-123 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.8E-123 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 1.8E-123 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 1.8E-123 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.8E-123 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.8E-123 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 1.8E-123 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 1.8E-123 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.8E-123 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 1.8E-123 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 Gene3D G3DSA:3.40.50.670 396 626 5.7E-81 T 28-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 SMART SM00433 34 622 2.7E-212 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 1.5E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 SUPERFAMILY SSF56719 388 619 1.67E-79 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 SUPERFAMILY SSF54211 217 382 1.65E-46 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 Pfam PF00204 DNA gyrase B 218 384 2.0E-42 T 28-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.1E-57 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 1.1E-57 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 1.1E-57 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 1.1E-57 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 1.1E-57 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.1E-57 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 1.1E-57 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 1.1E-57 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.1E-57 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 8.2E-27 T 28-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 Gene3D G3DSA:3.30.565.10 17 216 2.7E-65 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 Gene3D G3DSA:3.30.230.10 217 391 2.6E-40 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 Pfam PF01751 Toprim domain 413 521 8.9E-12 T 28-03-2018 IPR006171 TOPRIM domain AL549_RS07405 fbab8d9692e9e2a7085e2422d42da5c0 626 SMART SM00387 27 173 7.3E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 SUPERFAMILY SSF56507 903 1225 2.27E-134 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 Gene3D G3DSA:3.20.20.20 346 645 2.3E-74 T 28-03-2018 AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 Pfam PF02607 B12 binding domain 660 734 9.7E-26 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 SUPERFAMILY SSF51717 357 631 1.44E-87 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 SUPERFAMILY SSF52242 745 895 2.75E-45 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 SMART SM01018 658 741 3.6E-45 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 SUPERFAMILY SSF47644 654 740 4.97E-29 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 325 4.8E-82 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 28-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 Gene3D G3DSA:3.10.196.10 958 1083 3.1E-45 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 Gene3D G3DSA:3.10.196.10 1084 1226 5.7E-62 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 2.4E-124 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 Pfam PF02310 B12 binding domain 749 842 1.7E-17 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 Gene3D G3DSA:3.20.20.330 1 342 9.5E-115 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 Pfam PF00809 Pterin binding enzyme 361 599 1.2E-58 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 PIRSF PIRSF000381 3 1197 0.0 T 28-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 Gene3D G3DSA:1.10.1240.10 653 732 4.7E-37 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 SUPERFAMILY SSF82282 8 400 1.16E-118 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AL549_RS19900 94de69bfb624d4274b61ebbbf439d05c 1226 Gene3D G3DSA:3.40.50.280 733 906 9.3E-57 T 28-03-2018 AL549_RS05355 1873f735edcaf653d6aaf8e9b8fab3df 294 Pfam PF00491 Arginase family 72 226 3.3E-5 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL549_RS05355 1873f735edcaf653d6aaf8e9b8fab3df 294 Gene3D G3DSA:3.40.800.10 24 256 1.9E-14 T 28-03-2018 AL549_RS05355 1873f735edcaf653d6aaf8e9b8fab3df 294 SUPERFAMILY SSF52768 60 263 1.4E-20 T 28-03-2018 AL549_RS21565 13c3d3ff6c98f683f24ff7cafae13b60 193 SUPERFAMILY SSF46689 6 81 6.48E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS21565 13c3d3ff6c98f683f24ff7cafae13b60 193 Gene3D G3DSA:1.10.260.40 42 63 5.8E-10 T 28-03-2018 AL549_RS21565 13c3d3ff6c98f683f24ff7cafae13b60 193 Gene3D G3DSA:1.10.357.10 64 193 4.8E-4 T 28-03-2018 AL549_RS21565 13c3d3ff6c98f683f24ff7cafae13b60 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.7E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS21565 13c3d3ff6c98f683f24ff7cafae13b60 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.7E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS21565 13c3d3ff6c98f683f24ff7cafae13b60 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 6.0E-18 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS21565 13c3d3ff6c98f683f24ff7cafae13b60 193 Gene3D G3DSA:1.10.10.60 7 41 1.6E-18 T 28-03-2018 AL549_RS21565 13c3d3ff6c98f683f24ff7cafae13b60 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL549_RS15920 880c547e8c01dbc5a9e91561b657b9e1 305 Gene3D G3DSA:3.40.190.10 96 189 1.0E-7 T 28-03-2018 AL549_RS15920 880c547e8c01dbc5a9e91561b657b9e1 305 Gene3D G3DSA:3.40.190.10 190 274 2.5E-6 T 28-03-2018 AL549_RS15920 880c547e8c01dbc5a9e91561b657b9e1 305 SUPERFAMILY SSF46785 6 87 2.92E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS15920 880c547e8c01dbc5a9e91561b657b9e1 305 Gene3D G3DSA:1.10.10.10 4 89 3.6E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS15920 880c547e8c01dbc5a9e91561b657b9e1 305 Pfam PF03466 LysR substrate binding domain 98 300 5.0E-14 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS15920 880c547e8c01dbc5a9e91561b657b9e1 305 SUPERFAMILY SSF53850 92 301 4.75E-30 T 28-03-2018 AL549_RS15920 880c547e8c01dbc5a9e91561b657b9e1 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 3.3E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS18420 82551f339754e7b7baad38fdaa11eb71 782 Gene3D G3DSA:2.40.10.220 141 259 2.3E-9 T 28-03-2018 AL549_RS18420 82551f339754e7b7baad38fdaa11eb71 782 Gene3D G3DSA:2.40.10.220 465 591 6.9E-14 T 28-03-2018 AL549_RS18420 82551f339754e7b7baad38fdaa11eb71 782 SUPERFAMILY SSF141371 142 201 7.85E-5 T 28-03-2018 AL549_RS18420 82551f339754e7b7baad38fdaa11eb71 782 SUPERFAMILY SSF141371 466 547 6.47E-6 T 28-03-2018 AL549_RS18420 82551f339754e7b7baad38fdaa11eb71 782 Pfam PF07238 PilZ domain 145 233 1.9E-8 T 28-03-2018 IPR009875 PilZ domain GO:0035438 AL549_RS18420 82551f339754e7b7baad38fdaa11eb71 782 Pfam PF07238 PilZ domain 470 557 5.1E-10 T 28-03-2018 IPR009875 PilZ domain GO:0035438 AL549_RS20330 c80f3256cbb2e4db1244c0c2ad317199 326 Gene3D G3DSA:2.130.10.10 21 193 1.9E-23 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL549_RS20330 c80f3256cbb2e4db1244c0c2ad317199 326 Pfam PF13360 PQQ-like domain 171 286 3.7E-6 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AL549_RS20330 c80f3256cbb2e4db1244c0c2ad317199 326 SMART SM00320 285 323 260.0 T 28-03-2018 IPR001680 WD40 repeat GO:0005515 AL549_RS20330 c80f3256cbb2e4db1244c0c2ad317199 326 SMART SM00320 233 274 0.37 T 28-03-2018 IPR001680 WD40 repeat GO:0005515 AL549_RS20330 c80f3256cbb2e4db1244c0c2ad317199 326 SMART SM00320 25 62 470.0 T 28-03-2018 IPR001680 WD40 repeat GO:0005515 AL549_RS20330 c80f3256cbb2e4db1244c0c2ad317199 326 SMART SM00320 192 230 0.029 T 28-03-2018 IPR001680 WD40 repeat GO:0005515 AL549_RS20330 c80f3256cbb2e4db1244c0c2ad317199 326 SMART SM00320 68 106 250.0 T 28-03-2018 IPR001680 WD40 repeat GO:0005515 AL549_RS20330 c80f3256cbb2e4db1244c0c2ad317199 326 SMART SM00320 150 189 6.0E-4 T 28-03-2018 IPR001680 WD40 repeat GO:0005515 AL549_RS20330 c80f3256cbb2e4db1244c0c2ad317199 326 SUPERFAMILY SSF50998 27 317 5.02E-44 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AL549_RS20330 c80f3256cbb2e4db1244c0c2ad317199 326 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 28-03-2018 IPR019775 WD40 repeat, conserved site AL549_RS20330 c80f3256cbb2e4db1244c0c2ad317199 326 Gene3D G3DSA:2.120.10.30 194 325 7.0E-22 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL549_RS05310 dfaa2e494877df9d104273ea41acaad7 280 SUPERFAMILY SSF52540 6 226 2.1E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS05310 dfaa2e494877df9d104273ea41acaad7 280 Gene3D G3DSA:3.40.50.300 1 279 2.1E-59 T 28-03-2018 AL549_RS05310 dfaa2e494877df9d104273ea41acaad7 280 SMART SM00382 34 216 1.9E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS05310 dfaa2e494877df9d104273ea41acaad7 280 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 4.6E-106 T 28-03-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 AL549_RS05310 dfaa2e494877df9d104273ea41acaad7 280 Pfam PF00005 ABC transporter 25 166 1.8E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS05310 dfaa2e494877df9d104273ea41acaad7 280 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS19875 f509d1275402aa931a011470506e8b70 940 Gene3D G3DSA:3.40.50.300 423 613 4.7E-23 T 28-03-2018 AL549_RS19875 f509d1275402aa931a011470506e8b70 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 924 0.0 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AL549_RS19875 f509d1275402aa931a011470506e8b70 940 Gene3D G3DSA:3.40.50.300 35 135 2.2E-4 T 28-03-2018 AL549_RS19875 f509d1275402aa931a011470506e8b70 940 Pfam PF00005 ABC transporter 622 859 7.1E-10 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS19875 f509d1275402aa931a011470506e8b70 940 Gene3D G3DSA:1.10.8.280 284 404 1.0E-36 T 28-03-2018 AL549_RS19875 f509d1275402aa931a011470506e8b70 940 Gene3D G3DSA:3.30.190.20 136 247 1.2E-39 T 28-03-2018 AL549_RS19875 f509d1275402aa931a011470506e8b70 940 Gene3D G3DSA:3.40.50.300 3 34 3.8E-4 T 28-03-2018 AL549_RS19875 f509d1275402aa931a011470506e8b70 940 Gene3D G3DSA:3.40.50.300 614 938 8.3E-55 T 28-03-2018 AL549_RS19875 f509d1275402aa931a011470506e8b70 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.864 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AL549_RS19875 f509d1275402aa931a011470506e8b70 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS19875 f509d1275402aa931a011470506e8b70 940 SUPERFAMILY SSF52540 429 568 3.0E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS19875 f509d1275402aa931a011470506e8b70 940 SUPERFAMILY SSF52540 4 204 3.0E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS19875 f509d1275402aa931a011470506e8b70 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS19875 f509d1275402aa931a011470506e8b70 940 SUPERFAMILY SSF52540 620 912 2.72E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20000 991b78a55599c86e98e8b9edfd190d94 72 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 1.2E-24 T 28-03-2018 IPR014318 Phage shock protein, PspG AL549_RS20000 991b78a55599c86e98e8b9edfd190d94 72 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 1.4E-25 T 28-03-2018 IPR014318 Phage shock protein, PspG AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 15 28 1.7E-24 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 296 311 1.7E-24 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 47 61 1.7E-24 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 95 106 1.7E-24 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 389 400 1.7E-24 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 267 1.7E-24 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 Gene3D G3DSA:3.40.50.620 254 374 2.2E-22 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 Hamap MF_00098 Methionine--tRNA ligase [metG]. 11 550 41.289 T 28-03-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 SUPERFAMILY SSF57770 147 181 6.02E-13 T 28-03-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 SUPERFAMILY SSF50249 588 689 2.69E-34 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 Gene3D G3DSA:1.10.730.10 378 541 2.0E-33 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 Gene3D G3DSA:2.40.50.140 581 690 2.8E-32 T 28-03-2018 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 Gene3D G3DSA:2.170.220.10 186 253 5.0E-14 T 28-03-2018 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 Pfam PF01588 Putative tRNA binding domain 595 687 1.0E-25 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 SUPERFAMILY SSF47323 394 552 2.43E-43 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 SUPERFAMILY SSF52374 10 146 1.05E-98 T 28-03-2018 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 SUPERFAMILY SSF52374 181 392 1.05E-98 T 28-03-2018 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 556 689 6.8E-48 T 28-03-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 Gene3D G3DSA:3.40.50.620 9 82 2.7E-20 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 Gene3D G3DSA:2.20.28.20 147 180 3.3E-16 T 28-03-2018 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 14 540 1.2E-198 T 28-03-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL549_RS10635 f0dbe7ed50d9da8b44a863f0940d11db 690 Pfam PF09334 tRNA synthetases class I (M) 14 401 5.7E-164 T 28-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS19450 0ea8d42a65e94b866b72c1d18c480846 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 7.2E-68 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AL549_RS19450 0ea8d42a65e94b866b72c1d18c480846 239 Gene3D G3DSA:3.40.50.150 29 239 6.5E-28 T 28-03-2018 AL549_RS19450 0ea8d42a65e94b866b72c1d18c480846 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.785 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AL549_RS19450 0ea8d42a65e94b866b72c1d18c480846 239 SUPERFAMILY SSF53335 16 237 4.18E-35 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS19450 0ea8d42a65e94b866b72c1d18c480846 239 Pfam PF02390 Putative methyltransferase 62 232 4.7E-58 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AL549_RS06480 a570b643c8a44ad2f9f2eb53f5706976 123 Gene3D G3DSA:1.10.287.1080 1 122 2.4E-11 T 28-03-2018 AL549_RS06480 a570b643c8a44ad2f9f2eb53f5706976 123 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 93 1.4E-16 T 28-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AL549_RS06480 a570b643c8a44ad2f9f2eb53f5706976 123 SUPERFAMILY SSF101386 1 102 3.79E-13 T 28-03-2018 AL549_RS09785 03c0ed09649ec1c3d64c72c58926a691 478 SUPERFAMILY SSF47384 258 322 1.47E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS09785 03c0ed09649ec1c3d64c72c58926a691 478 Gene3D G3DSA:3.30.565.10 342 475 1.2E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS09785 03c0ed09649ec1c3d64c72c58926a691 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 3.1E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS09785 03c0ed09649ec1c3d64c72c58926a691 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 3.1E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS09785 03c0ed09649ec1c3d64c72c58926a691 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 3.1E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS09785 03c0ed09649ec1c3d64c72c58926a691 478 SUPERFAMILY SSF55874 333 474 2.36E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS09785 03c0ed09649ec1c3d64c72c58926a691 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 473 6.5E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS09785 03c0ed09649ec1c3d64c72c58926a691 478 SMART SM00387 371 476 2.5E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS09785 03c0ed09649ec1c3d64c72c58926a691 478 SMART SM00304 221 273 2.0E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS09785 03c0ed09649ec1c3d64c72c58926a691 478 Gene3D G3DSA:1.10.287.130 264 341 3.7E-8 T 28-03-2018 AL549_RS10920 5c437b076fdd3872a9193a08384f63ea 535 Pfam PF01471 Putative peptidoglycan binding domain 243 280 8.9E-10 T 28-03-2018 IPR002477 Peptidoglycan binding-like AL549_RS10920 5c437b076fdd3872a9193a08384f63ea 535 SUPERFAMILY SSF141523 416 467 2.49E-17 T 28-03-2018 AL549_RS10920 5c437b076fdd3872a9193a08384f63ea 535 SUPERFAMILY SSF141523 306 360 2.49E-17 T 28-03-2018 AL549_RS10920 5c437b076fdd3872a9193a08384f63ea 535 Gene3D G3DSA:2.40.440.10 306 477 4.8E-22 T 28-03-2018 AL549_RS10920 5c437b076fdd3872a9193a08384f63ea 535 Gene3D G3DSA:1.10.101.10 212 283 1.2E-13 T 28-03-2018 IPR002477 Peptidoglycan binding-like AL549_RS10920 5c437b076fdd3872a9193a08384f63ea 535 SUPERFAMILY SSF47090 210 288 1.33E-14 T 28-03-2018 IPR002477 Peptidoglycan binding-like AL549_RS10920 5c437b076fdd3872a9193a08384f63ea 535 Pfam PF03734 L,D-transpeptidase catalytic domain 308 472 9.4E-27 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AL549_RS08460 ab031b216163106bc4d02845b18cb827 198 Pfam PF01025 GrpE 36 198 2.8E-56 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL549_RS08460 ab031b216163106bc4d02845b18cb827 198 Gene3D G3DSA:3.90.20.20 2 141 3.5E-29 T 28-03-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AL549_RS08460 ab031b216163106bc4d02845b18cb827 198 Hamap MF_01151 Protein GrpE [grpE]. 2 198 22.591 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL549_RS08460 ab031b216163106bc4d02845b18cb827 198 SUPERFAMILY SSF58014 44 142 6.28E-30 T 28-03-2018 AL549_RS08460 ab031b216163106bc4d02845b18cb827 198 ProSitePatterns PS01071 grpE protein signature. 153 196 - T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL549_RS08460 ab031b216163106bc4d02845b18cb827 198 SUPERFAMILY SSF51064 143 198 4.32E-20 T 28-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AL549_RS08460 ab031b216163106bc4d02845b18cb827 198 Gene3D G3DSA:2.30.22.10 142 198 1.7E-23 T 28-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AL549_RS08460 ab031b216163106bc4d02845b18cb827 198 PRINTS PR00773 GrpE protein signature 177 196 1.1E-28 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL549_RS08460 ab031b216163106bc4d02845b18cb827 198 PRINTS PR00773 GrpE protein signature 95 110 1.1E-28 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL549_RS08460 ab031b216163106bc4d02845b18cb827 198 PRINTS PR00773 GrpE protein signature 67 83 1.1E-28 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL549_RS08460 ab031b216163106bc4d02845b18cb827 198 PRINTS PR00773 GrpE protein signature 150 165 1.1E-28 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL549_RS19420 fa724b44095d663e8d7b1b42108f5c45 96 SUPERFAMILY SSF69786 3 96 9.42E-32 T 28-03-2018 IPR003746 Protein of unknown function DUF167 AL549_RS19420 fa724b44095d663e8d7b1b42108f5c45 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 94 19.538 T 28-03-2018 IPR003746 Protein of unknown function DUF167 AL549_RS19420 fa724b44095d663e8d7b1b42108f5c45 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 9 91 1.1E-25 T 28-03-2018 IPR005228 Conserved hypothetical protein CHP00251 AL549_RS19420 fa724b44095d663e8d7b1b42108f5c45 96 SMART SM01152 8 84 2.4E-35 T 28-03-2018 IPR003746 Protein of unknown function DUF167 AL549_RS19420 fa724b44095d663e8d7b1b42108f5c45 96 Gene3D G3DSA:3.30.1200.10 2 96 1.1E-28 T 28-03-2018 IPR003746 Protein of unknown function DUF167 AL549_RS19420 fa724b44095d663e8d7b1b42108f5c45 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 82 3.1E-24 T 28-03-2018 IPR003746 Protein of unknown function DUF167 AL549_RS10830 775e880d27e5b25d5775057e9a369c3b 226 SUPERFAMILY SSF52540 6 223 2.93E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS10830 775e880d27e5b25d5775057e9a369c3b 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 2.5E-85 T 28-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AL549_RS10830 775e880d27e5b25d5775057e9a369c3b 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.6 T 28-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AL549_RS10830 775e880d27e5b25d5775057e9a369c3b 226 Gene3D G3DSA:3.40.50.300 4 223 3.7E-51 T 28-03-2018 AL549_RS10830 775e880d27e5b25d5775057e9a369c3b 226 Pfam PF02224 Cytidylate kinase 8 221 1.7E-78 T 28-03-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AL549_RS20740 4e97b7843595bfaf9d46182ba915dd8a 462 SUPERFAMILY SSF55874 296 458 1.44E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS20740 4e97b7843595bfaf9d46182ba915dd8a 462 SMART SM00304 190 243 9.4E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS20740 4e97b7843595bfaf9d46182ba915dd8a 462 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 36 168 2.9E-60 T 28-03-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain AL549_RS20740 4e97b7843595bfaf9d46182ba915dd8a 462 SMART SM00388 244 306 6.4E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS20740 4e97b7843595bfaf9d46182ba915dd8a 462 Gene3D G3DSA:3.30.565.10 310 462 3.1E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS20740 4e97b7843595bfaf9d46182ba915dd8a 462 Gene3D G3DSA:1.10.287.130 234 302 7.9E-12 T 28-03-2018 AL549_RS20740 4e97b7843595bfaf9d46182ba915dd8a 462 SUPERFAMILY SSF47384 230 305 1.96E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS20740 4e97b7843595bfaf9d46182ba915dd8a 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 3.1E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS20740 4e97b7843595bfaf9d46182ba915dd8a 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 3.1E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS20740 4e97b7843595bfaf9d46182ba915dd8a 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 3.1E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS20740 4e97b7843595bfaf9d46182ba915dd8a 462 Pfam PF00672 HAMP domain 191 238 1.9E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS20740 4e97b7843595bfaf9d46182ba915dd8a 462 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 304 3.4E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS20740 4e97b7843595bfaf9d46182ba915dd8a 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 458 6.3E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS20740 4e97b7843595bfaf9d46182ba915dd8a 462 SMART SM00387 350 460 9.4E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS16600 f1cb43bc71d87affdaac1f08c4aa9f5c 102 Pfam PF09413 Putative prokaryotic signal transducing protein 2 68 5.8E-6 T 28-03-2018 IPR018551 Domain of unknown function DUF2007 AL549_RS16600 f1cb43bc71d87affdaac1f08c4aa9f5c 102 Gene3D G3DSA:3.30.70.790 1 75 1.7E-12 T 28-03-2018 AL549_RS01855 24f904fbd0be3320b8b9aa8c1598f4ac 256 SMART SM00850 161 256 1.5E-29 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AL549_RS01855 24f904fbd0be3320b8b9aa8c1598f4ac 256 SMART SM00448 5 117 3.2E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS01855 24f904fbd0be3320b8b9aa8c1598f4ac 256 Pfam PF04397 LytTr DNA-binding domain 162 255 5.0E-28 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AL549_RS01855 24f904fbd0be3320b8b9aa8c1598f4ac 256 Gene3D G3DSA:2.40.50.40 152 221 2.1E-16 T 28-03-2018 AL549_RS01855 24f904fbd0be3320b8b9aa8c1598f4ac 256 SUPERFAMILY SSF52172 2 129 4.13E-33 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS01855 24f904fbd0be3320b8b9aa8c1598f4ac 256 Gene3D G3DSA:3.40.50.2300 4 145 3.2E-31 T 28-03-2018 AL549_RS01855 24f904fbd0be3320b8b9aa8c1598f4ac 256 Pfam PF00072 Response regulator receiver domain 8 116 5.8E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS08975 6e72595684e0a7cc7c62c67566fab663 363 Gene3D G3DSA:1.10.150.300 110 200 6.5E-26 T 28-03-2018 IPR023192 TGS-like domain Reactome: R-HSA-114608 AL549_RS08975 6e72595684e0a7cc7c62c67566fab663 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.4E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS08975 6e72595684e0a7cc7c62c67566fab663 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.4E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS08975 6e72595684e0a7cc7c62c67566fab663 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.4E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS08975 6e72595684e0a7cc7c62c67566fab663 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS08975 6e72595684e0a7cc7c62c67566fab663 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.2E-39 T 28-03-2018 IPR013029 Domain of unknown function DUF933 Reactome: R-HSA-114608 AL549_RS08975 6e72595684e0a7cc7c62c67566fab663 363 SUPERFAMILY SSF81271 279 360 1.24E-36 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL549_RS08975 6e72595684e0a7cc7c62c67566fab663 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.169 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AL549_RS08975 6e72595684e0a7cc7c62c67566fab663 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.0E-168 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AL549_RS08975 6e72595684e0a7cc7c62c67566fab663 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 1.0E-21 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS08975 6e72595684e0a7cc7c62c67566fab663 363 Gene3D G3DSA:3.10.20.30 263 362 7.1E-46 T 28-03-2018 IPR012675 Beta-grasp domain AL549_RS08975 6e72595684e0a7cc7c62c67566fab663 363 Gene3D G3DSA:3.40.50.300 1 79 5.1E-8 T 28-03-2018 AL549_RS08975 6e72595684e0a7cc7c62c67566fab663 363 SUPERFAMILY SSF52540 3 301 1.14E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS08975 6e72595684e0a7cc7c62c67566fab663 363 PIRSF PIRSF006641 1 363 1.2E-157 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AL549_RS17475 75f594f89c55c2e6c82ca1df568fdd32 351 SUPERFAMILY SSF48029 25 136 4.58E-20 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL549_RS17475 75f594f89c55c2e6c82ca1df568fdd32 351 SUPERFAMILY SSF48029 133 344 8.63E-67 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL549_RS17475 75f594f89c55c2e6c82ca1df568fdd32 351 Pfam PF14842 FliG N-terminal domain 24 124 2.8E-27 T 28-03-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AL549_RS17475 75f594f89c55c2e6c82ca1df568fdd32 351 PIRSF PIRSF003161 18 351 2.7E-113 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL549_RS17475 75f594f89c55c2e6c82ca1df568fdd32 351 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 20 349 2.9E-96 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL549_RS17475 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 24 40 7.4E-60 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL549_RS17475 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 53 79 7.4E-60 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL549_RS17475 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 287 7.4E-60 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL549_RS17475 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 214 239 7.4E-60 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL549_RS17475 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 133 156 7.4E-60 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL549_RS17475 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 7.4E-60 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL549_RS17475 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 291 317 7.4E-60 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL549_RS17475 75f594f89c55c2e6c82ca1df568fdd32 351 Pfam PF14841 FliG middle domain 134 206 2.7E-25 T 28-03-2018 IPR032779 Flagellar motor switch protein FliG, middle domain AL549_RS17475 75f594f89c55c2e6c82ca1df568fdd32 351 Gene3D G3DSA:1.10.220.30 89 212 1.2E-20 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL549_RS17475 75f594f89c55c2e6c82ca1df568fdd32 351 Gene3D G3DSA:1.10.220.30 214 351 1.3E-32 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL549_RS17475 75f594f89c55c2e6c82ca1df568fdd32 351 Gene3D G3DSA:1.10.220.30 19 88 5.4E-9 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL549_RS17475 75f594f89c55c2e6c82ca1df568fdd32 351 Pfam PF01706 FliG C-terminal domain 236 343 1.8E-41 T 28-03-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal AL549_RS02350 cf4fd2ea4e31ddff31a8859cd28c19a8 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 239 1.6E-19 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AL549_RS02350 cf4fd2ea4e31ddff31a8859cd28c19a8 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 267 5.9E-55 T 28-03-2018 IPR000150 Cof family GO:0016787 AL549_RS02350 cf4fd2ea4e31ddff31a8859cd28c19a8 273 Gene3D G3DSA:3.40.50.1000 117 272 2.5E-18 T 28-03-2018 IPR023214 HAD-like domain AL549_RS02350 cf4fd2ea4e31ddff31a8859cd28c19a8 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 267 2.4E-67 T 28-03-2018 IPR023214 HAD-like domain AL549_RS02350 cf4fd2ea4e31ddff31a8859cd28c19a8 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 28-03-2018 AL549_RS02350 cf4fd2ea4e31ddff31a8859cd28c19a8 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 220 242 - T 28-03-2018 AL549_RS02350 cf4fd2ea4e31ddff31a8859cd28c19a8 273 Gene3D G3DSA:3.40.50.1000 1 116 2.9E-19 T 28-03-2018 IPR023214 HAD-like domain AL549_RS02350 cf4fd2ea4e31ddff31a8859cd28c19a8 273 SUPERFAMILY SSF56784 1 270 4.78E-64 T 28-03-2018 IPR023214 HAD-like domain AL549_RS11985 96be66af9ad0364b96c329301bd0d94d 408 Pfam PF04303 PrpF protein 21 403 2.8E-172 T 28-03-2018 IPR007400 PrpF protein AL549_RS11985 96be66af9ad0364b96c329301bd0d94d 408 SUPERFAMILY SSF54506 18 197 4.71E-70 T 28-03-2018 AL549_RS11985 96be66af9ad0364b96c329301bd0d94d 408 Gene3D G3DSA:3.10.310.10 18 204 9.2E-85 T 28-03-2018 AL549_RS11985 96be66af9ad0364b96c329301bd0d94d 408 Gene3D G3DSA:3.10.310.10 205 385 2.3E-69 T 28-03-2018 AL549_RS11985 96be66af9ad0364b96c329301bd0d94d 408 SUPERFAMILY SSF54506 201 406 4.08E-74 T 28-03-2018 AL549_RS11985 96be66af9ad0364b96c329301bd0d94d 408 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 19 407 5.5E-226 T 28-03-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 AL549_RS06040 45dea4dfeb9ea60039c0334eb8dbea60 489 Gene3D G3DSA:3.20.20.60 3 169 2.6E-35 T 28-03-2018 AL549_RS06040 45dea4dfeb9ea60039c0334eb8dbea60 489 Gene3D G3DSA:3.20.20.60 170 325 8.7E-54 T 28-03-2018 AL549_RS06040 45dea4dfeb9ea60039c0334eb8dbea60 489 SUPERFAMILY SSF51621 3 75 5.5E-87 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL549_RS06040 45dea4dfeb9ea60039c0334eb8dbea60 489 SUPERFAMILY SSF51621 169 345 5.5E-87 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL549_RS06040 45dea4dfeb9ea60039c0334eb8dbea60 489 SUPERFAMILY SSF52935 350 477 8.61E-21 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS06040 45dea4dfeb9ea60039c0334eb8dbea60 489 PRINTS PR01050 Pyruvate kinase family signature 221 247 4.4E-53 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS06040 45dea4dfeb9ea60039c0334eb8dbea60 489 PRINTS PR01050 Pyruvate kinase family signature 248 272 4.4E-53 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS06040 45dea4dfeb9ea60039c0334eb8dbea60 489 PRINTS PR01050 Pyruvate kinase family signature 298 316 4.4E-53 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS06040 45dea4dfeb9ea60039c0334eb8dbea60 489 PRINTS PR01050 Pyruvate kinase family signature 59 75 4.4E-53 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS06040 45dea4dfeb9ea60039c0334eb8dbea60 489 PRINTS PR01050 Pyruvate kinase family signature 188 202 4.4E-53 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS06040 45dea4dfeb9ea60039c0334eb8dbea60 489 PRINTS PR01050 Pyruvate kinase family signature 273 297 4.4E-53 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS06040 45dea4dfeb9ea60039c0334eb8dbea60 489 PRINTS PR01050 Pyruvate kinase family signature 317 333 4.4E-53 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS06040 45dea4dfeb9ea60039c0334eb8dbea60 489 Gene3D G3DSA:3.40.1380.20 326 479 3.3E-24 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS06040 45dea4dfeb9ea60039c0334eb8dbea60 489 SUPERFAMILY SSF50800 71 168 2.27E-23 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain AL549_RS06040 45dea4dfeb9ea60039c0334eb8dbea60 489 Pfam PF02887 Pyruvate kinase, alpha/beta domain 381 441 1.7E-8 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS06040 45dea4dfeb9ea60039c0334eb8dbea60 489 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 476 3.3E-147 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS06040 45dea4dfeb9ea60039c0334eb8dbea60 489 Pfam PF00224 Pyruvate kinase, barrel domain 3 342 2.2E-125 T 28-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 SMART SM00387 464 579 2.4E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 SMART SM00448 598 712 1.4E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 Gene3D G3DSA:3.30.450.20 185 329 4.9E-5 T 28-03-2018 AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 Gene3D G3DSA:3.30.450.20 69 184 2.2E-15 T 28-03-2018 AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 Gene3D G3DSA:3.40.50.2300 591 794 1.4E-33 T 28-03-2018 AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 SUPERFAMILY SSF47384 340 418 2.75E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 Pfam PF02743 Cache domain 41 227 8.2E-13 T 28-03-2018 IPR033479 Double Cache domain 1 AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 9.3E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 9.3E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 532 9.3E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 9.3E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 Gene3D G3DSA:3.30.565.10 412 579 5.6E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 Gene3D G3DSA:1.10.287.130 343 411 3.1E-17 T 28-03-2018 AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 SMART SM00388 352 417 4.3E-24 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 Pfam PF00512 His Kinase A (phospho-acceptor) domain 353 417 1.9E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 Pfam PF00072 Response regulator receiver domain 601 712 2.0E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 SUPERFAMILY SSF52172 596 731 1.42E-32 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 465 577 8.4E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS16390 0526f2741067c9263986bf82e2133f35 805 SUPERFAMILY SSF55874 406 577 1.44E-44 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS17175 971428b54437116d6d18dbfbfa09db30 504 SUPERFAMILY SSF56235 2 256 7.98E-72 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL549_RS17175 971428b54437116d6d18dbfbfa09db30 504 Pfam PF13522 Glutamine amidotransferase domain 64 207 3.5E-17 T 28-03-2018 AL549_RS17175 971428b54437116d6d18dbfbfa09db30 504 Gene3D G3DSA:3.60.20.10 2 256 1.6E-56 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL549_RS17175 971428b54437116d6d18dbfbfa09db30 504 SUPERFAMILY SSF53271 249 482 3.15E-68 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AL549_RS17175 971428b54437116d6d18dbfbfa09db30 504 PIRSF PIRSF000485 1 480 3.5E-170 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AL549_RS17175 971428b54437116d6d18dbfbfa09db30 504 Pfam PF00156 Phosphoribosyl transferase domain 280 391 2.5E-6 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL549_RS17175 971428b54437116d6d18dbfbfa09db30 504 Gene3D G3DSA:3.40.50.2020 274 443 5.3E-35 T 28-03-2018 AL549_RS17175 971428b54437116d6d18dbfbfa09db30 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 2.2E-165 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AL549_RS17175 971428b54437116d6d18dbfbfa09db30 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 44.854 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AL549_RS03695 625b0d33cc90b35a558950b8891d4487 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 6.0E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS03695 625b0d33cc90b35a558950b8891d4487 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 9 111 8.1E-17 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL549_RS03695 625b0d33cc90b35a558950b8891d4487 229 Gene3D G3DSA:1.10.3720.10 4 220 1.8E-39 T 28-03-2018 AL549_RS03695 625b0d33cc90b35a558950b8891d4487 229 SUPERFAMILY SSF161098 10 202 3.92E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS07950 776b03429a73b73df7a1e4d12f008693 328 SUPERFAMILY SSF51445 2 284 2.42E-84 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS07950 776b03429a73b73df7a1e4d12f008693 328 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 327 45.419 T 28-03-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL549_RS07950 776b03429a73b73df7a1e4d12f008693 328 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 7 284 3.1E-81 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AL549_RS07950 776b03429a73b73df7a1e4d12f008693 328 Gene3D G3DSA:3.20.20.300 1 295 4.4E-73 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AL549_RS07950 776b03429a73b73df7a1e4d12f008693 328 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 229 246 - T 28-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AL549_RS18125 5d4d11b569ca7a96e7ad86c5a615ac5f 704 Pfam PF13604 AAA domain 238 398 2.1E-31 T 28-03-2018 AL549_RS18125 5d4d11b569ca7a96e7ad86c5a615ac5f 704 Pfam PF13538 UvrD-like helicase C-terminal domain 631 677 1.0E-14 T 28-03-2018 IPR027785 UvrD-like helicase C-terminal domain AL549_RS18125 5d4d11b569ca7a96e7ad86c5a615ac5f 704 Gene3D G3DSA:3.40.50.300 126 438 1.7E-60 T 28-03-2018 AL549_RS18125 5d4d11b569ca7a96e7ad86c5a615ac5f 704 SUPERFAMILY SSF52540 229 443 1.51E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18125 5d4d11b569ca7a96e7ad86c5a615ac5f 704 SUPERFAMILY SSF52540 16 163 1.51E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18125 5d4d11b569ca7a96e7ad86c5a615ac5f 704 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 23 700 50.1 T 28-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AL549_RS18125 5d4d11b569ca7a96e7ad86c5a615ac5f 704 Gene3D G3DSA:3.40.50.300 448 691 2.5E-31 T 28-03-2018 AL549_RS18125 5d4d11b569ca7a96e7ad86c5a615ac5f 704 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 15 702 2.1E-212 T 28-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AL549_RS18125 5d4d11b569ca7a96e7ad86c5a615ac5f 704 SUPERFAMILY SSF52540 529 701 4.34E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18125 5d4d11b569ca7a96e7ad86c5a615ac5f 704 SUPERFAMILY SSF52540 363 461 4.34E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS23020 508219e77c667795cb280bd4b0f17f78 345 Gene3D G3DSA:3.40.50.720 1 331 1.9E-64 T 28-03-2018 AL549_RS23020 508219e77c667795cb280bd4b0f17f78 345 SUPERFAMILY SSF51735 1 264 6.76E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS23020 508219e77c667795cb280bd4b0f17f78 345 Pfam PF02719 Polysaccharide biosynthesis protein 7 282 1.0E-105 T 28-03-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AL549_RS23020 508219e77c667795cb280bd4b0f17f78 345 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 285 331 1.3E-22 T 28-03-2018 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 AL549_RS10960 f8fa0545412bf38a9cefd076dcc042e2 324 Gene3D G3DSA:3.40.190.10 92 183 1.5E-20 T 28-03-2018 AL549_RS10960 f8fa0545412bf38a9cefd076dcc042e2 324 SUPERFAMILY SSF53850 91 321 5.07E-41 T 28-03-2018 AL549_RS10960 f8fa0545412bf38a9cefd076dcc042e2 324 Gene3D G3DSA:1.10.10.10 1 85 8.9E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS10960 f8fa0545412bf38a9cefd076dcc042e2 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS10960 f8fa0545412bf38a9cefd076dcc042e2 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS10960 f8fa0545412bf38a9cefd076dcc042e2 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS10960 f8fa0545412bf38a9cefd076dcc042e2 324 SUPERFAMILY SSF46785 1 113 7.07E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS10960 f8fa0545412bf38a9cefd076dcc042e2 324 Pfam PF03466 LysR substrate binding domain 91 292 2.2E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS10960 f8fa0545412bf38a9cefd076dcc042e2 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 6.4E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS10960 f8fa0545412bf38a9cefd076dcc042e2 324 Gene3D G3DSA:3.40.190.10 184 264 1.7E-19 T 28-03-2018 AL549_RS06455 60e44c443babf5762f1db353bfe510e7 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 6.7E-7 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS06455 60e44c443babf5762f1db353bfe510e7 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 6.7E-7 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS06455 60e44c443babf5762f1db353bfe510e7 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 6.7E-7 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS06455 60e44c443babf5762f1db353bfe510e7 128 Gene3D G3DSA:1.10.1660.10 57 128 9.9E-17 T 28-03-2018 AL549_RS06455 60e44c443babf5762f1db353bfe510e7 128 SMART SM00422 1 70 1.8E-21 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS06455 60e44c443babf5762f1db353bfe510e7 128 Pfam PF00376 MerR family regulatory protein 2 39 1.0E-12 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS06455 60e44c443babf5762f1db353bfe510e7 128 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 2.9E-58 T 28-03-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 AL549_RS06455 60e44c443babf5762f1db353bfe510e7 128 Pfam PF09278 MerR, DNA binding 46 107 2.9E-16 T 28-03-2018 IPR015358 Transcription regulator MerR, DNA binding AL549_RS06455 60e44c443babf5762f1db353bfe510e7 128 Gene3D G3DSA:1.10.1660.10 1 56 1.8E-18 T 28-03-2018 AL549_RS06455 60e44c443babf5762f1db353bfe510e7 128 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS06455 60e44c443babf5762f1db353bfe510e7 128 SUPERFAMILY SSF46955 1 126 1.9E-32 T 28-03-2018 IPR009061 Putative DNA-binding domain AL549_RS09195 73baf06718e3d75444813b675673cbe2 638 SUPERFAMILY SSF64518 531 637 1.96E-24 T 28-03-2018 AL549_RS09195 73baf06718e3d75444813b675673cbe2 638 SUPERFAMILY SSF64518 171 411 1.96E-24 T 28-03-2018 AL549_RS09195 73baf06718e3d75444813b675673cbe2 638 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 581 637 2.3E-9 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL549_RS09195 73baf06718e3d75444813b675673cbe2 638 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 9.5E-14 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL549_RS09195 73baf06718e3d75444813b675673cbe2 638 PRINTS PR01005 Flagellar hook-associated protein signature 408 425 9.5E-14 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL549_RS09195 73baf06718e3d75444813b675673cbe2 638 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 9.5E-14 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL549_RS09195 73baf06718e3d75444813b675673cbe2 638 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 9.5E-14 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL549_RS09195 73baf06718e3d75444813b675673cbe2 638 PRINTS PR01005 Flagellar hook-associated protein signature 125 145 9.5E-14 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL549_RS09195 73baf06718e3d75444813b675673cbe2 638 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 9.5E-14 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL549_RS09195 73baf06718e3d75444813b675673cbe2 638 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 339 9.0E-62 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL549_RS11510 ebd5b7746f4717570985eac7c6c012dd 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL549_RS11510 ebd5b7746f4717570985eac7c6c012dd 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.4E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS11510 ebd5b7746f4717570985eac7c6c012dd 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.4E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS11510 ebd5b7746f4717570985eac7c6c012dd 208 Gene3D G3DSA:1.10.10.60 1 50 7.8E-17 T 28-03-2018 AL549_RS11510 ebd5b7746f4717570985eac7c6c012dd 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 2.3E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS11510 ebd5b7746f4717570985eac7c6c012dd 208 Gene3D G3DSA:1.10.357.10 51 208 1.7E-27 T 28-03-2018 AL549_RS11510 ebd5b7746f4717570985eac7c6c012dd 208 SUPERFAMILY SSF48498 80 207 2.71E-41 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL549_RS11510 ebd5b7746f4717570985eac7c6c012dd 208 SUPERFAMILY SSF46689 3 77 4.41E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS02890 bd6d1679f39490c4b13973cd1bc74b28 636 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 79 127 1.1E-10 T 28-03-2018 IPR011096 FTP domain AL549_RS02890 bd6d1679f39490c4b13973cd1bc74b28 636 Gene3D G3DSA:1.10.390.10 383 531 1.2E-43 T 28-03-2018 AL549_RS02890 bd6d1679f39490c4b13973cd1bc74b28 636 Gene3D G3DSA:3.10.170.10 226 382 1.8E-39 T 28-03-2018 AL549_RS02890 bd6d1679f39490c4b13973cd1bc74b28 636 SUPERFAMILY SSF55486 228 527 7.14E-87 T 28-03-2018 AL549_RS02890 bd6d1679f39490c4b13973cd1bc74b28 636 Gene3D G3DSA:2.60.120.380 540 636 9.5E-13 T 28-03-2018 AL549_RS02890 bd6d1679f39490c4b13973cd1bc74b28 636 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 557 621 8.2E-10 T 28-03-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial AL549_RS02890 bd6d1679f39490c4b13973cd1bc74b28 636 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 236 378 1.7E-36 T 28-03-2018 IPR013856 Peptidase M4 domain GO:0004222 AL549_RS02890 bd6d1679f39490c4b13973cd1bc74b28 636 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 335 355 2.2E-27 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL549_RS02890 bd6d1679f39490c4b13973cd1bc74b28 636 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 452 468 2.2E-27 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL549_RS02890 bd6d1679f39490c4b13973cd1bc74b28 636 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 390 401 2.2E-27 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL549_RS02890 bd6d1679f39490c4b13973cd1bc74b28 636 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 369 385 2.2E-27 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL549_RS02890 bd6d1679f39490c4b13973cd1bc74b28 636 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 381 525 7.2E-37 T 28-03-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 AL549_RS02890 bd6d1679f39490c4b13973cd1bc74b28 636 Pfam PF03413 Peptidase propeptide and YPEB domain 142 218 3.4E-10 T 28-03-2018 IPR025711 PepSY domain AL549_RS13010 67c4410043520dc6340d78f14c972673 93 SUPERFAMILY SSF143120 10 81 2.49E-17 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL549_RS13010 67c4410043520dc6340d78f14c972673 93 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 74 4.7E-17 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL549_RS13010 67c4410043520dc6340d78f14c972673 93 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 63 2.3E-13 T 28-03-2018 AL549_RS13010 67c4410043520dc6340d78f14c972673 93 Gene3D G3DSA:3.40.1620.10 9 70 1.2E-13 T 28-03-2018 AL549_RS12370 30fc612854cae2637720eaa51e9694a0 420 SUPERFAMILY SSF48695 202 239 6.38E-5 T 28-03-2018 IPR011031 Multihaem cytochrome AL549_RS12370 30fc612854cae2637720eaa51e9694a0 420 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 12 404 1.0E-103 T 28-03-2018 IPR005219 Conserved hypothetical protein CHP00155 AL549_RS12370 30fc612854cae2637720eaa51e9694a0 420 Gene3D G3DSA:3.90.10.10 2 260 3.3E-5 T 28-03-2018 AL549_RS12370 30fc612854cae2637720eaa51e9694a0 420 Pfam PF04403 Paraquat-inducible protein A 56 207 3.8E-35 T 28-03-2018 IPR007498 Paraquat-inducible protein A AL549_RS12370 30fc612854cae2637720eaa51e9694a0 420 Pfam PF04403 Paraquat-inducible protein A 250 406 1.1E-47 T 28-03-2018 IPR007498 Paraquat-inducible protein A AL549_RS23590 c216f2ad4038ac537673370719dae0ce 328 Gene3D G3DSA:3.40.718.10 1 328 5.7E-127 T 28-03-2018 AL549_RS23590 c216f2ad4038ac537673370719dae0ce 328 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 320 5.0E-106 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AL549_RS23590 c216f2ad4038ac537673370719dae0ce 328 SUPERFAMILY SSF53659 3 326 8.32E-112 T 28-03-2018 AL549_RS23590 c216f2ad4038ac537673370719dae0ce 328 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 323 2.9E-126 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AL549_RS23590 c216f2ad4038ac537673370719dae0ce 328 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 324 35.331 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AL549_RS12465 0dbd24de69ed51ed5c83374201c03560 103 Pfam PF12321 Protein of unknown function (DUF3634) 2 100 6.4E-40 T 28-03-2018 IPR022090 Protein of unknown function DUF3634 AL549_RS22000 692e5b7e68b7b4764cec3b75e7975df0 186 SUPERFAMILY SSF55821 3 182 4.27E-58 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL549_RS22000 692e5b7e68b7b4764cec3b75e7975df0 186 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 2 184 39.776 T 28-03-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 AL549_RS22000 692e5b7e68b7b4764cec3b75e7975df0 186 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 186 1.4E-44 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 AL549_RS22000 692e5b7e68b7b4764cec3b75e7975df0 186 Gene3D G3DSA:3.90.870.10 2 184 1.9E-56 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL549_RS22000 692e5b7e68b7b4764cec3b75e7975df0 186 Pfam PF01300 Telomere recombination 11 186 2.8E-50 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 AL549_RS08790 bcd21de3c25c21cd530fd7fa583c92b4 416 Gene3D G3DSA:3.90.1150.10 275 414 9.6E-59 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS08790 bcd21de3c25c21cd530fd7fa583c92b4 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 28-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL549_RS08790 bcd21de3c25c21cd530fd7fa583c92b4 416 PIRSF PIRSF000412 1 416 5.6E-169 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL549_RS08790 bcd21de3c25c21cd530fd7fa583c92b4 416 Gene3D G3DSA:3.40.640.10 37 274 2.8E-54 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS08790 bcd21de3c25c21cd530fd7fa583c92b4 416 SUPERFAMILY SSF53383 6 415 5.44E-185 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS08790 bcd21de3c25c21cd530fd7fa583c92b4 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.414 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL549_RS08790 bcd21de3c25c21cd530fd7fa583c92b4 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 4.2E-183 T 28-03-2018 AL549_RS17015 caf98668e5711c2e55226cb547fadd55 198 Pfam PF00589 Phage integrase family 27 183 1.5E-16 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL549_RS17015 caf98668e5711c2e55226cb547fadd55 198 Gene3D G3DSA:1.10.443.10 12 188 4.0E-24 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL549_RS17015 caf98668e5711c2e55226cb547fadd55 198 SUPERFAMILY SSF56349 12 196 2.21E-38 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL549_RS13735 f5e521e1f21a13205a256aa2a156208e 171 SUPERFAMILY SSF55729 2 150 4.72E-35 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS13735 f5e521e1f21a13205a256aa2a156208e 171 Gene3D G3DSA:3.40.630.30 1 170 6.0E-20 T 28-03-2018 AL549_RS13735 f5e521e1f21a13205a256aa2a156208e 171 Pfam PF13302 Acetyltransferase (GNAT) domain 9 147 5.3E-27 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS00410 d30b73b80c36bbdb010f00375301dfd1 442 Pfam PF13437 HlyD family secretion protein 296 396 9.8E-17 T 28-03-2018 AL549_RS00410 d30b73b80c36bbdb010f00375301dfd1 442 Pfam PF13533 Biotin-lipoyl like 55 94 4.7E-6 T 28-03-2018 AL549_RS00410 d30b73b80c36bbdb010f00375301dfd1 442 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 17 441 1.7E-112 T 28-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AL549_RS00410 d30b73b80c36bbdb010f00375301dfd1 442 Gene3D G3DSA:2.40.50.100 48 332 3.2E-19 T 28-03-2018 AL549_RS00410 d30b73b80c36bbdb010f00375301dfd1 442 SUPERFAMILY SSF111369 57 127 1.02E-5 T 28-03-2018 AL549_RS00410 d30b73b80c36bbdb010f00375301dfd1 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 329 5.9E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS00410 d30b73b80c36bbdb010f00375301dfd1 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 341 365 5.9E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS00410 d30b73b80c36bbdb010f00375301dfd1 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 66 86 5.9E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS00410 d30b73b80c36bbdb010f00375301dfd1 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 421 441 5.9E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS00410 d30b73b80c36bbdb010f00375301dfd1 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 365 388 5.9E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS00410 d30b73b80c36bbdb010f00375301dfd1 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 24 47 5.9E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS00410 d30b73b80c36bbdb010f00375301dfd1 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 406 421 5.9E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS00385 11d6dc28c0faef2107410e98cbd081ce 367 Pfam PF00924 Mechanosensitive ion channel 138 342 9.7E-57 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL549_RS00385 11d6dc28c0faef2107410e98cbd081ce 367 SUPERFAMILY SSF82689 252 351 9.68E-22 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AL549_RS00385 11d6dc28c0faef2107410e98cbd081ce 367 Gene3D G3DSA:3.30.70.100 249 347 3.5E-20 T 28-03-2018 AL549_RS00385 11d6dc28c0faef2107410e98cbd081ce 367 SUPERFAMILY SSF50182 180 247 3.6E-18 T 28-03-2018 IPR010920 LSM domain AL549_RS00385 11d6dc28c0faef2107410e98cbd081ce 367 SUPERFAMILY SSF82861 100 179 2.09E-12 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AL549_RS00385 11d6dc28c0faef2107410e98cbd081ce 367 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 212 246 - T 28-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AL549_RS00385 11d6dc28c0faef2107410e98cbd081ce 367 Gene3D G3DSA:2.30.30.60 196 248 7.9E-15 T 28-03-2018 AL549_RS15115 dd569fd5e2e502becbee286369504dec 88 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 6 81 6.6E-23 T 28-03-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system AL549_RS05600 e97b32a50ee1624ec188b36c15ecc092 122 Pfam PF04076 Bacterial OB fold (BOF) protein 49 116 2.3E-10 T 28-03-2018 IPR005220 Bacterial OB-fold AL549_RS05600 e97b32a50ee1624ec188b36c15ecc092 122 SUPERFAMILY SSF101756 19 121 2.22E-22 T 28-03-2018 IPR005220 Bacterial OB-fold AL549_RS05600 e97b32a50ee1624ec188b36c15ecc092 122 Gene3D G3DSA:2.40.50.200 17 122 2.5E-16 T 28-03-2018 AL549_RS23025 cc02fdc6e8f4ba1a50f4f2c3fbcb3665 367 Gene3D G3DSA:3.90.25.10 144 225 1.3E-8 T 28-03-2018 AL549_RS23025 cc02fdc6e8f4ba1a50f4f2c3fbcb3665 367 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 186 1.0E-15 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL549_RS23025 cc02fdc6e8f4ba1a50f4f2c3fbcb3665 367 SUPERFAMILY SSF51735 1 218 2.31E-40 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS23025 cc02fdc6e8f4ba1a50f4f2c3fbcb3665 367 Gene3D G3DSA:3.40.50.720 1 143 7.6E-15 T 28-03-2018 AL549_RS23025 cc02fdc6e8f4ba1a50f4f2c3fbcb3665 367 Gene3D G3DSA:2.60.120.10 243 366 2.0E-18 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS23025 cc02fdc6e8f4ba1a50f4f2c3fbcb3665 367 SUPERFAMILY SSF51182 237 364 2.45E-20 T 28-03-2018 IPR011051 RmlC-like cupin domain AL549_RS17600 50f27df5c3cdc5cb1adfc18077d5cba7 180 PIRSF PIRSF028103 1 178 7.9E-63 T 28-03-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AL549_RS17600 50f27df5c3cdc5cb1adfc18077d5cba7 180 SUPERFAMILY SSF55021 88 176 1.83E-20 T 28-03-2018 AL549_RS17600 50f27df5c3cdc5cb1adfc18077d5cba7 180 Pfam PF13740 ACT domain 3 78 2.4E-24 T 28-03-2018 AL549_RS17600 50f27df5c3cdc5cb1adfc18077d5cba7 180 Gene3D G3DSA:3.30.70.260 3 84 1.8E-10 T 28-03-2018 AL549_RS17600 50f27df5c3cdc5cb1adfc18077d5cba7 180 SUPERFAMILY SSF55021 1 82 8.33E-17 T 28-03-2018 AL549_RS17600 50f27df5c3cdc5cb1adfc18077d5cba7 180 Gene3D G3DSA:3.30.70.260 85 175 4.4E-13 T 28-03-2018 AL549_RS21585 e69bd5d6eed1315a8de471417b17f0b8 494 Gene3D G3DSA:1.10.1040.10 210 490 3.2E-82 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL549_RS21585 e69bd5d6eed1315a8de471417b17f0b8 494 SUPERFAMILY SSF48179 210 341 4.08E-40 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL549_RS21585 e69bd5d6eed1315a8de471417b17f0b8 494 SUPERFAMILY SSF51735 27 209 2.83E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS21585 e69bd5d6eed1315a8de471417b17f0b8 494 Gene3D G3DSA:3.40.50.720 1 42 6.5E-4 T 28-03-2018 AL549_RS21585 e69bd5d6eed1315a8de471417b17f0b8 494 Gene3D G3DSA:3.40.50.720 56 208 2.3E-49 T 28-03-2018 AL549_RS21585 e69bd5d6eed1315a8de471417b17f0b8 494 SUPERFAMILY SSF48179 348 487 1.87E-42 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL549_RS21585 e69bd5d6eed1315a8de471417b17f0b8 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 1.4E-16 T 28-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL549_RS21585 e69bd5d6eed1315a8de471417b17f0b8 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 1.2E-26 T 28-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL549_RS21585 e69bd5d6eed1315a8de471417b17f0b8 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 37.029 T 28-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL549_RS21585 e69bd5d6eed1315a8de471417b17f0b8 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 3.7E-125 T 28-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL549_RS21585 e69bd5d6eed1315a8de471417b17f0b8 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 2.1E-60 T 28-03-2018 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL549_RS15785 2a064ddeb30df7796e737d8d0e38f989 182 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 24 45 1.2E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS15785 2a064ddeb30df7796e737d8d0e38f989 182 Pfam PF07963 Prokaryotic N-terminal methylation motif 20 45 1.2E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS15785 2a064ddeb30df7796e737d8d0e38f989 182 Gene3D G3DSA:3.30.700.10 26 181 4.9E-13 T 28-03-2018 AL549_RS15785 2a064ddeb30df7796e737d8d0e38f989 182 SUPERFAMILY SSF54523 26 117 1.49E-11 T 28-03-2018 AL549_RS15785 2a064ddeb30df7796e737d8d0e38f989 182 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 24 44 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS02325 eca0145b2a12b8e55907499ae2ab72e8 619 Pfam PF00664 ABC transporter transmembrane region 41 308 5.0E-17 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS02325 eca0145b2a12b8e55907499ae2ab72e8 619 SUPERFAMILY SSF52540 351 601 1.45E-89 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS02325 eca0145b2a12b8e55907499ae2ab72e8 619 SUPERFAMILY SSF90123 29 344 1.09E-50 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS02325 eca0145b2a12b8e55907499ae2ab72e8 619 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS02325 eca0145b2a12b8e55907499ae2ab72e8 619 Gene3D G3DSA:3.40.50.300 347 604 3.7E-77 T 28-03-2018 AL549_RS02325 eca0145b2a12b8e55907499ae2ab72e8 619 SMART SM00382 386 577 1.1E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS02325 eca0145b2a12b8e55907499ae2ab72e8 619 Gene3D G3DSA:1.20.1560.10 15 346 1.4E-32 T 28-03-2018 AL549_RS02325 eca0145b2a12b8e55907499ae2ab72e8 619 Pfam PF00005 ABC transporter 378 531 7.1E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS16590 87ae09d71070cc33f62afa69cd09f70d 197 Pfam PF04994 TfoX C-terminal domain 115 194 1.0E-31 T 28-03-2018 IPR007077 TfoX, C-terminal AL549_RS16590 87ae09d71070cc33f62afa69cd09f70d 197 Gene3D G3DSA:1.10.150.20 116 195 1.4E-22 T 28-03-2018 AL549_RS16590 87ae09d71070cc33f62afa69cd09f70d 197 Pfam PF04993 TfoX N-terminal domain 12 103 2.5E-30 T 28-03-2018 IPR007076 TfoX, N-terminal AL549_RS16590 87ae09d71070cc33f62afa69cd09f70d 197 Gene3D G3DSA:3.30.1460.30 1 105 2.4E-24 T 28-03-2018 AL549_RS16590 87ae09d71070cc33f62afa69cd09f70d 197 SUPERFAMILY SSF159894 5 103 8.63E-31 T 28-03-2018 AL549_RS16590 87ae09d71070cc33f62afa69cd09f70d 197 PIRSF PIRSF028788 1 197 1.4E-50 T 28-03-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type AL549_RS15370 2347f634e5b5cad65a36231ce374a85c 336 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 327 44.507 T 28-03-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AL549_RS15370 2347f634e5b5cad65a36231ce374a85c 336 ProSitePatterns PS01053 Arginase family signature. 255 276 - T 28-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AL549_RS15370 2347f634e5b5cad65a36231ce374a85c 336 PIRSF PIRSF036979 26 333 8.5E-25 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL549_RS15370 2347f634e5b5cad65a36231ce374a85c 336 PRINTS PR00116 Arginase signature 125 140 1.6E-5 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL549_RS15370 2347f634e5b5cad65a36231ce374a85c 336 PRINTS PR00116 Arginase signature 252 281 1.6E-5 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL549_RS15370 2347f634e5b5cad65a36231ce374a85c 336 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 327 1.7E-115 T 28-03-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AL549_RS15370 2347f634e5b5cad65a36231ce374a85c 336 Pfam PF00491 Arginase family 46 325 1.7E-61 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL549_RS15370 2347f634e5b5cad65a36231ce374a85c 336 SUPERFAMILY SSF52768 13 330 3.6E-85 T 28-03-2018 AL549_RS15370 2347f634e5b5cad65a36231ce374a85c 336 Gene3D G3DSA:3.40.800.10 4 336 1.2E-82 T 28-03-2018 AL549_RS17535 434af6e2c4e5ee6cc2ff83b4e7a4067d 377 PRINTS PR00207 Flagellin signature 37 54 3.0E-27 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL549_RS17535 434af6e2c4e5ee6cc2ff83b4e7a4067d 377 PRINTS PR00207 Flagellin signature 76 95 3.0E-27 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL549_RS17535 434af6e2c4e5ee6cc2ff83b4e7a4067d 377 PRINTS PR00207 Flagellin signature 111 134 3.0E-27 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL549_RS17535 434af6e2c4e5ee6cc2ff83b4e7a4067d 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.3E-43 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL549_RS17535 434af6e2c4e5ee6cc2ff83b4e7a4067d 377 Gene3D G3DSA:1.20.1330.10 44 340 1.3E-69 T 28-03-2018 AL549_RS17535 434af6e2c4e5ee6cc2ff83b4e7a4067d 377 SUPERFAMILY SSF64518 5 376 3.53E-94 T 28-03-2018 AL549_RS17535 434af6e2c4e5ee6cc2ff83b4e7a4067d 377 Pfam PF07196 Flagellin hook IN motif 204 246 3.3E-11 T 28-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL549_RS17535 434af6e2c4e5ee6cc2ff83b4e7a4067d 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 376 7.3E-24 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL549_RS10120 a576777246bff0740fc37b43ca2b2e09 312 Pfam PF00850 Histone deacetylase domain 44 289 2.6E-45 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL549_RS10120 a576777246bff0740fc37b43ca2b2e09 312 Gene3D G3DSA:3.40.800.20 1 307 7.1E-61 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL549_RS10120 a576777246bff0740fc37b43ca2b2e09 312 SUPERFAMILY SSF52768 2 297 3.12E-78 T 28-03-2018 AL549_RS10120 a576777246bff0740fc37b43ca2b2e09 312 PRINTS PR01270 Histone deacetylase superfamily signature 158 173 4.7E-16 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL549_RS10120 a576777246bff0740fc37b43ca2b2e09 312 PRINTS PR01270 Histone deacetylase superfamily signature 232 242 4.7E-16 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL549_RS10120 a576777246bff0740fc37b43ca2b2e09 312 PRINTS PR01270 Histone deacetylase superfamily signature 124 147 4.7E-16 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL549_RS17320 f5c95431b5309b3b120d69701a957a1a 184 Gene3D G3DSA:3.40.30.10 19 179 1.4E-28 T 28-03-2018 AL549_RS17320 f5c95431b5309b3b120d69701a957a1a 184 Pfam PF08534 Redoxin 41 164 1.1E-27 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL549_RS17320 f5c95431b5309b3b120d69701a957a1a 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 177 2.6E-72 T 28-03-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AL549_RS17320 f5c95431b5309b3b120d69701a957a1a 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL549_RS17320 f5c95431b5309b3b120d69701a957a1a 184 SUPERFAMILY SSF52833 46 178 5.0E-39 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS10165 fb9f915034363a777c588139fffd836a 75 Gene3D G3DSA:1.10.3390.10 2 71 3.5E-30 T 28-03-2018 IPR023202 YejL-like domain AL549_RS10165 fb9f915034363a777c588139fffd836a 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 6.0E-33 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 AL549_RS10165 fb9f915034363a777c588139fffd836a 75 PIRSF PIRSF006188 1 72 1.2E-34 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 AL549_RS10165 fb9f915034363a777c588139fffd836a 75 SUPERFAMILY SSF158651 1 75 3.27E-29 T 28-03-2018 IPR023202 YejL-like domain AL549_RS10165 fb9f915034363a777c588139fffd836a 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.597 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 AL549_RS10165 fb9f915034363a777c588139fffd836a 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 2.8E-19 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 AL549_RS15825 171c3a5ca4ef1a6570dadce0fb6d941b 723 Pfam PF13807 G-rich domain on putative tyrosine kinase 378 451 2.1E-9 T 28-03-2018 IPR032807 Tyrosine kinase, G-rich domain AL549_RS15825 171c3a5ca4ef1a6570dadce0fb6d941b 723 Gene3D G3DSA:3.40.50.300 511 717 4.7E-14 T 28-03-2018 AL549_RS15825 171c3a5ca4ef1a6570dadce0fb6d941b 723 Gene3D G3DSA:3.30.1890.10 48 426 2.3E-19 T 28-03-2018 AL549_RS15825 171c3a5ca4ef1a6570dadce0fb6d941b 723 SUPERFAMILY SSF52540 515 699 4.73E-14 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11170 a2ecafaf44bbe87d635d331a227111cd 460 SUPERFAMILY SSF47323 316 459 3.27E-40 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS11170 a2ecafaf44bbe87d635d331a227111cd 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.297 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AL549_RS11170 a2ecafaf44bbe87d635d331a227111cd 460 SUPERFAMILY SSF52374 1 313 1.61E-104 T 28-03-2018 AL549_RS11170 a2ecafaf44bbe87d635d331a227111cd 460 Gene3D G3DSA:3.40.50.620 1 305 4.5E-97 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS11170 a2ecafaf44bbe87d635d331a227111cd 460 SMART SM00840 341 402 6.9E-28 T 28-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AL549_RS11170 a2ecafaf44bbe87d635d331a227111cd 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 2.3E-142 T 28-03-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AL549_RS11170 a2ecafaf44bbe87d635d331a227111cd 460 Gene3D G3DSA:1.20.120.640 306 394 2.2E-21 T 28-03-2018 AL549_RS11170 a2ecafaf44bbe87d635d331a227111cd 460 Pfam PF09190 DALR domain 341 402 7.0E-25 T 28-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AL549_RS11170 a2ecafaf44bbe87d635d331a227111cd 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL549_RS11170 a2ecafaf44bbe87d635d331a227111cd 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL549_RS11170 a2ecafaf44bbe87d635d331a227111cd 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL549_RS11170 a2ecafaf44bbe87d635d331a227111cd 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL549_RS11170 a2ecafaf44bbe87d635d331a227111cd 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 7.4E-193 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AL549_RS12690 39be757ef89b578bef7e74ddcb7bf4c1 293 Gene3D G3DSA:3.30.70.100 196 283 4.8E-9 T 28-03-2018 AL549_RS12690 39be757ef89b578bef7e74ddcb7bf4c1 293 Pfam PF00924 Mechanosensitive ion channel 87 284 2.9E-35 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL549_RS12690 39be757ef89b578bef7e74ddcb7bf4c1 293 SUPERFAMILY SSF50182 126 186 3.27E-14 T 28-03-2018 IPR010920 LSM domain AL549_RS12690 39be757ef89b578bef7e74ddcb7bf4c1 293 SUPERFAMILY SSF82689 198 286 1.57E-7 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AL549_RS12690 39be757ef89b578bef7e74ddcb7bf4c1 293 Gene3D G3DSA:2.30.30.60 141 189 1.3E-12 T 28-03-2018 AL549_RS01135 1595e80404cfdcc1abbae2089a8b9777 482 Gene3D G3DSA:1.10.10.10 11 99 1.2E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01135 1595e80404cfdcc1abbae2089a8b9777 482 SUPERFAMILY SSF53383 122 478 1.57E-76 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS01135 1595e80404cfdcc1abbae2089a8b9777 482 Gene3D G3DSA:3.90.1150.10 384 482 5.6E-13 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS01135 1595e80404cfdcc1abbae2089a8b9777 482 SUPERFAMILY SSF46785 21 92 4.25E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01135 1595e80404cfdcc1abbae2089a8b9777 482 Gene3D G3DSA:3.40.640.10 142 383 2.5E-41 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS01135 1595e80404cfdcc1abbae2089a8b9777 482 SMART SM00345 29 88 2.0E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS01135 1595e80404cfdcc1abbae2089a8b9777 482 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 88 1.5E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS01135 1595e80404cfdcc1abbae2089a8b9777 482 Pfam PF00155 Aminotransferase class I and II 147 467 5.0E-32 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL549_RS06680 46fd21d26e516e33cbc8eed86b21348d 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 316 2.3E-53 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL549_RS06680 46fd21d26e516e33cbc8eed86b21348d 323 Gene3D G3DSA:1.10.3470.10 41 322 1.4E-39 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL549_RS23660 39e3851ea94b82943d2b9a8e099f0161 574 SUPERFAMILY SSF52518 2 180 3.07E-65 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS23660 39e3851ea94b82943d2b9a8e099f0161 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 569 5.2E-272 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL549_RS23660 39e3851ea94b82943d2b9a8e099f0161 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 170 1.1E-59 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL549_RS23660 39e3851ea94b82943d2b9a8e099f0161 574 Gene3D G3DSA:3.40.50.970 357 564 9.8E-50 T 28-03-2018 AL549_RS23660 39e3851ea94b82943d2b9a8e099f0161 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 2.0E-50 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL549_RS23660 39e3851ea94b82943d2b9a8e099f0161 574 Gene3D G3DSA:3.40.50.970 1 201 3.9E-65 T 28-03-2018 AL549_RS23660 39e3851ea94b82943d2b9a8e099f0161 574 SUPERFAMILY SSF52518 373 566 1.71E-67 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS23660 39e3851ea94b82943d2b9a8e099f0161 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AL549_RS23660 39e3851ea94b82943d2b9a8e099f0161 574 SUPERFAMILY SSF52467 191 364 8.18E-64 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL549_RS23660 39e3851ea94b82943d2b9a8e099f0161 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 332 3.5E-47 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL549_RS23660 39e3851ea94b82943d2b9a8e099f0161 574 Gene3D G3DSA:3.40.50.1220 202 356 1.2E-52 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL549_RS16280 1acc474ca810a061a6622b2e6ce910af 309 PIRSF PIRSF006278 4 183 3.0E-20 T 28-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AL549_RS16280 1acc474ca810a061a6622b2e6ce910af 309 PIRSF PIRSF006278 202 297 0.15 T 28-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AL549_RS16280 1acc474ca810a061a6622b2e6ce910af 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 219 2.0E-10 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL549_RS16280 1acc474ca810a061a6622b2e6ce910af 309 Gene3D G3DSA:3.40.50.1100 33 137 1.4E-16 T 28-03-2018 AL549_RS16280 1acc474ca810a061a6622b2e6ce910af 309 SUPERFAMILY SSF53686 9 295 2.34E-58 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL549_RS21685 e54b52217855bf0942705c1e3b3cdebf 305 Gene3D G3DSA:1.20.58.180 217 295 3.0E-33 T 28-03-2018 AL549_RS21685 e54b52217855bf0942705c1e3b3cdebf 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.709 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL549_RS21685 e54b52217855bf0942705c1e3b3cdebf 305 Gene3D G3DSA:3.30.930.10 1 215 8.8E-86 T 28-03-2018 AL549_RS21685 e54b52217855bf0942705c1e3b3cdebf 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 302 1.1E-170 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL549_RS21685 e54b52217855bf0942705c1e3b3cdebf 305 SUPERFAMILY SSF55681 8 293 1.88E-132 T 28-03-2018 AL549_RS21685 e54b52217855bf0942705c1e3b3cdebf 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 293 3.1E-149 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL549_RS21685 e54b52217855bf0942705c1e3b3cdebf 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 2.7E-70 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL549_RS21685 e54b52217855bf0942705c1e3b3cdebf 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 2.7E-70 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL549_RS21685 e54b52217855bf0942705c1e3b3cdebf 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.7E-70 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL549_RS21685 e54b52217855bf0942705c1e3b3cdebf 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 2.7E-70 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL549_RS21685 e54b52217855bf0942705c1e3b3cdebf 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 2.7E-70 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL549_RS21685 e54b52217855bf0942705c1e3b3cdebf 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 2.7E-70 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL549_RS18980 2d6e0883c8e1d08e1b5b2858e0e9acb0 210 Gene3D G3DSA:1.10.530.10 44 208 2.2E-16 T 28-03-2018 AL549_RS18980 2d6e0883c8e1d08e1b5b2858e0e9acb0 210 SUPERFAMILY SSF53955 17 202 5.3E-23 T 28-03-2018 IPR023346 Lysozyme-like domain AL549_RS22435 b59d40d2c73f066114e8bcc81eb4614a 213 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 6.2E-89 T 28-03-2018 IPR021342 Protein of unknown function DUF2959 AL549_RS22435 b59d40d2c73f066114e8bcc81eb4614a 213 Gene3D G3DSA:1.10.10.10 54 104 0.046 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS22435 b59d40d2c73f066114e8bcc81eb4614a 213 Gene3D G3DSA:1.10.3160.10 129 212 0.0042 T 28-03-2018 AL549_RS01165 7749ad0fe1c8645909c778525c5a5f0d 633 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 276 618 1.0E-84 T 28-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AL549_RS01165 7749ad0fe1c8645909c778525c5a5f0d 633 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 167 256 2.0E-15 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS01165 7749ad0fe1c8645909c778525c5a5f0d 633 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 131 1.1E-42 T 28-03-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 AL549_RS01165 7749ad0fe1c8645909c778525c5a5f0d 633 Gene3D G3DSA:3.40.930.10 1 149 3.4E-39 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS01165 7749ad0fe1c8645909c778525c5a5f0d 633 SUPERFAMILY SSF52794 164 259 1.15E-34 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS01165 7749ad0fe1c8645909c778525c5a5f0d 633 Pfam PF02378 Phosphotransferase system, EIIC 290 565 5.6E-16 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL549_RS01165 7749ad0fe1c8645909c778525c5a5f0d 633 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 147 3.2E-36 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AL549_RS01165 7749ad0fe1c8645909c778525c5a5f0d 633 Gene3D G3DSA:3.40.50.2300 163 259 2.0E-36 T 28-03-2018 AL549_RS01165 7749ad0fe1c8645909c778525c5a5f0d 633 SUPERFAMILY SSF55804 1 146 7.98E-40 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS01165 7749ad0fe1c8645909c778525c5a5f0d 633 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 165 247 3.9E-30 T 28-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AL549_RS07455 93f2fb93055df6939c8df7e296ca288a 421 SUPERFAMILY SSF81342 248 296 5.97E-92 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL549_RS07455 93f2fb93055df6939c8df7e296ca288a 421 SUPERFAMILY SSF81342 6 221 5.97E-92 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL549_RS07455 93f2fb93055df6939c8df7e296ca288a 421 SUPERFAMILY SSF81648 297 411 2.62E-33 T 28-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AL549_RS07455 93f2fb93055df6939c8df7e296ca288a 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 5.5E-40 T 28-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AL549_RS07455 93f2fb93055df6939c8df7e296ca288a 421 PIRSF PIRSF038885 1 421 1.5E-151 T 28-03-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 AL549_RS07455 93f2fb93055df6939c8df7e296ca288a 421 Gene3D G3DSA:1.20.810.10 6 416 3.8E-159 T 28-03-2018 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 AL549_RS07455 93f2fb93055df6939c8df7e296ca288a 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 6.5E-66 T 28-03-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AL549_RS04710 1de3dcb15d076cff85d451a73853b3c5 387 Pfam PF06738 Putative threonine/serine exporter 97 230 8.9E-15 T 28-03-2018 IPR010619 Putative threonine/serine exporter AL549_RS04710 1de3dcb15d076cff85d451a73853b3c5 387 Pfam PF12821 Threonine/Serine exporter, ThrE 255 376 2.6E-7 T 28-03-2018 IPR024528 Threonine/Serine exporter, ThrE AL549_RS03065 64d9393c6c6a3b2a0c63fce495e423fc 387 Gene3D G3DSA:3.40.50.2300 19 159 8.0E-28 T 28-03-2018 AL549_RS03065 64d9393c6c6a3b2a0c63fce495e423fc 387 Gene3D G3DSA:3.40.50.2300 160 328 2.0E-26 T 28-03-2018 AL549_RS03065 64d9393c6c6a3b2a0c63fce495e423fc 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 30 46 8.7E-13 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL549_RS03065 64d9393c6c6a3b2a0c63fce495e423fc 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 71 89 8.7E-13 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL549_RS03065 64d9393c6c6a3b2a0c63fce495e423fc 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 52 68 8.7E-13 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL549_RS03065 64d9393c6c6a3b2a0c63fce495e423fc 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 256 274 8.7E-13 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AL549_RS03065 64d9393c6c6a3b2a0c63fce495e423fc 387 SUPERFAMILY SSF53822 29 371 1.21E-83 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS03065 64d9393c6c6a3b2a0c63fce495e423fc 387 Pfam PF13458 Periplasmic binding protein 29 366 1.6E-71 T 28-03-2018 IPR028081 Leucine-binding protein domain AL549_RS22775 d4acec8efbc04fe97972fc1ea07ced26 263 SUPERFAMILY SSF53448 6 147 7.7E-23 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS22775 d4acec8efbc04fe97972fc1ea07ced26 263 Pfam PF00535 Glycosyl transferase family 2 12 114 1.3E-12 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL549_RS22775 d4acec8efbc04fe97972fc1ea07ced26 263 Gene3D G3DSA:3.90.550.10 2 154 4.7E-19 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS23290 d0820181b46c0dbc5a895051ff85cae4 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 6.8E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS23290 d0820181b46c0dbc5a895051ff85cae4 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 6.8E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS23290 d0820181b46c0dbc5a895051ff85cae4 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 6.8E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS23290 d0820181b46c0dbc5a895051ff85cae4 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 6.8E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS23290 d0820181b46c0dbc5a895051ff85cae4 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 6.8E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS23290 d0820181b46c0dbc5a895051ff85cae4 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 6.0E-201 T 28-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL549_RS23290 d0820181b46c0dbc5a895051ff85cae4 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 219 2.3E-45 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS23290 d0820181b46c0dbc5a895051ff85cae4 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AL549_RS23290 d0820181b46c0dbc5a895051ff85cae4 476 SUPERFAMILY SSF50447 242 327 3.53E-24 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL549_RS23290 d0820181b46c0dbc5a895051ff85cae4 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 216 1.8E-13 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL549_RS23290 d0820181b46c0dbc5a895051ff85cae4 476 Gene3D G3DSA:2.40.30.10 331 435 8.2E-19 T 28-03-2018 AL549_RS23290 d0820181b46c0dbc5a895051ff85cae4 476 Gene3D G3DSA:2.40.30.10 237 328 1.1E-22 T 28-03-2018 AL549_RS23290 d0820181b46c0dbc5a895051ff85cae4 476 SUPERFAMILY SSF52540 19 234 7.0E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS23290 d0820181b46c0dbc5a895051ff85cae4 476 Gene3D G3DSA:3.40.50.300 21 236 1.6E-42 T 28-03-2018 AL549_RS23290 d0820181b46c0dbc5a895051ff85cae4 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 54.096 T 28-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL549_RS23290 d0820181b46c0dbc5a895051ff85cae4 476 SUPERFAMILY SSF50465 332 433 6.23E-31 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL549_RS16875 167efaeb5db1b141d87198f00a25229c 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 7.3E-62 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS16875 167efaeb5db1b141d87198f00a25229c 429 Gene3D G3DSA:3.50.50.60 1 127 9.4E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS16875 167efaeb5db1b141d87198f00a25229c 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.8E-13 T 28-03-2018 AL549_RS16875 167efaeb5db1b141d87198f00a25229c 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.8E-13 T 28-03-2018 AL549_RS16875 167efaeb5db1b141d87198f00a25229c 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 1.8E-13 T 28-03-2018 AL549_RS16875 167efaeb5db1b141d87198f00a25229c 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.8E-13 T 28-03-2018 AL549_RS16875 167efaeb5db1b141d87198f00a25229c 429 SUPERFAMILY SSF51905 3 219 2.59E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS16875 167efaeb5db1b141d87198f00a25229c 429 Gene3D G3DSA:3.50.50.60 128 343 5.7E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS16875 167efaeb5db1b141d87198f00a25229c 429 SUPERFAMILY SSF51905 165 347 3.42E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS16875 167efaeb5db1b141d87198f00a25229c 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 7.7E-7 T 28-03-2018 AL549_RS16875 167efaeb5db1b141d87198f00a25229c 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 7.7E-7 T 28-03-2018 AL549_RS16875 167efaeb5db1b141d87198f00a25229c 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 7.7E-7 T 28-03-2018 AL549_RS17495 5fedfe8774dc4cd16f584f8c7f2def1b 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 315 1.2E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS17495 5fedfe8774dc4cd16f584f8c7f2def1b 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 334 1.2E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS17495 5fedfe8774dc4cd16f584f8c7f2def1b 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 282 1.2E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS17495 5fedfe8774dc4cd16f584f8c7f2def1b 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 296 1.2E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS17495 5fedfe8774dc4cd16f584f8c7f2def1b 344 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 186 4.0E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS17495 5fedfe8774dc4cd16f584f8c7f2def1b 344 SUPERFAMILY SSF55874 177 338 1.44E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS17495 5fedfe8774dc4cd16f584f8c7f2def1b 344 Gene3D G3DSA:3.30.565.10 189 344 5.2E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS17495 5fedfe8774dc4cd16f584f8c7f2def1b 344 Gene3D G3DSA:3.30.450.20 2 115 9.5E-9 T 28-03-2018 AL549_RS17495 5fedfe8774dc4cd16f584f8c7f2def1b 344 SMART SM00387 231 337 2.9E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS17495 5fedfe8774dc4cd16f584f8c7f2def1b 344 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 336 2.3E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS17495 5fedfe8774dc4cd16f584f8c7f2def1b 344 Pfam PF13188 PAS domain 18 59 1.9E-6 T 28-03-2018 IPR000014 PAS domain AL549_RS17495 5fedfe8774dc4cd16f584f8c7f2def1b 344 Gene3D G3DSA:1.10.287.130 116 184 2.7E-7 T 28-03-2018 AL549_RS17495 5fedfe8774dc4cd16f584f8c7f2def1b 344 SUPERFAMILY SSF47384 117 188 3.34E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS17495 5fedfe8774dc4cd16f584f8c7f2def1b 344 SMART SM00388 122 188 6.8E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS17495 5fedfe8774dc4cd16f584f8c7f2def1b 344 SUPERFAMILY SSF55785 18 85 2.3E-7 T 28-03-2018 IPR000014 PAS domain AL549_RS07135 1419df8cb2f4f9389df7bae06051bef3 380 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 238 364 35.198 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL549_RS07135 1419df8cb2f4f9389df7bae06051bef3 380 Gene3D G3DSA:2.170.150.20 230 380 1.3E-53 T 28-03-2018 AL549_RS07135 1419df8cb2f4f9389df7bae06051bef3 380 SUPERFAMILY SSF51316 240 379 6.8E-60 T 28-03-2018 IPR011057 Mss4-like AL549_RS07135 1419df8cb2f4f9389df7bae06051bef3 380 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 193 1.2E-49 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL549_RS07135 1419df8cb2f4f9389df7bae06051bef3 380 Gene3D G3DSA:3.30.1060.10 26 211 2.4E-59 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL549_RS07135 1419df8cb2f4f9389df7bae06051bef3 380 SUPERFAMILY SSF55068 33 206 1.12E-68 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL549_RS07135 1419df8cb2f4f9389df7bae06051bef3 380 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 41 200 33.879 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL549_RS07135 1419df8cb2f4f9389df7bae06051bef3 380 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 240 372 6.0E-61 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL549_RS07135 1419df8cb2f4f9389df7bae06051bef3 380 Pfam PF01641 SelR domain 244 363 2.0E-46 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL549_RS07135 1419df8cb2f4f9389df7bae06051bef3 380 Pfam PF01625 Peptide methionine sulfoxide reductase 44 194 1.5E-55 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL549_RS20180 f0bf38300ffea74095904fe2676786bb 388 Gene3D G3DSA:3.90.1150.10 249 387 2.3E-49 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS20180 f0bf38300ffea74095904fe2676786bb 388 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 2.8E-198 T 28-03-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 AL549_RS20180 f0bf38300ffea74095904fe2676786bb 388 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 1.6E-134 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL549_RS20180 f0bf38300ffea74095904fe2676786bb 388 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL549_RS20180 f0bf38300ffea74095904fe2676786bb 388 SUPERFAMILY SSF53383 10 383 6.33E-114 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS20180 f0bf38300ffea74095904fe2676786bb 388 Gene3D G3DSA:3.40.640.10 2 248 7.4E-53 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS20180 f0bf38300ffea74095904fe2676786bb 388 PIRSF PIRSF001434 1 385 3.9E-129 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL549_RS00655 32c373d759d9ea4a2d6bf41d0c108902 639 Gene3D G3DSA:3.30.450.20 229 362 5.6E-12 T 28-03-2018 AL549_RS00655 32c373d759d9ea4a2d6bf41d0c108902 639 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 475 631 1.4E-35 T 28-03-2018 IPR000160 GGDEF domain AL549_RS00655 32c373d759d9ea4a2d6bf41d0c108902 639 Pfam PF00990 Diguanylate cyclase, GGDEF domain 478 629 2.9E-40 T 28-03-2018 IPR000160 GGDEF domain AL549_RS00655 32c373d759d9ea4a2d6bf41d0c108902 639 Pfam PF17152 Periplasmic sensor domain 50 95 2.3E-6 T 28-03-2018 IPR033417 Periplasmic sensor domain CHASE8 AL549_RS00655 32c373d759d9ea4a2d6bf41d0c108902 639 Gene3D G3DSA:3.30.450.20 363 489 7.0E-12 T 28-03-2018 AL549_RS00655 32c373d759d9ea4a2d6bf41d0c108902 639 Pfam PF13426 PAS domain 259 352 0.034 T 28-03-2018 IPR000014 PAS domain AL549_RS00655 32c373d759d9ea4a2d6bf41d0c108902 639 Pfam PF13426 PAS domain 387 466 0.13 T 28-03-2018 IPR000014 PAS domain AL549_RS00655 32c373d759d9ea4a2d6bf41d0c108902 639 SMART SM00267 467 633 6.2E-47 T 28-03-2018 IPR000160 GGDEF domain AL549_RS00655 32c373d759d9ea4a2d6bf41d0c108902 639 Gene3D G3DSA:3.30.70.270 490 639 1.4E-47 T 28-03-2018 AL549_RS00655 32c373d759d9ea4a2d6bf41d0c108902 639 SMART SM00304 180 233 0.0062 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS00655 32c373d759d9ea4a2d6bf41d0c108902 639 SUPERFAMILY SSF55073 483 635 9.42E-42 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS01495 f73d001654522063c0449f12d3b9df64 268 SUPERFAMILY SSF53850 22 200 5.65E-21 T 28-03-2018 AL549_RS01495 f73d001654522063c0449f12d3b9df64 268 SUPERFAMILY SSF53850 230 267 5.65E-21 T 28-03-2018 AL549_RS01495 f73d001654522063c0449f12d3b9df64 268 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 212 2.5E-8 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS01495 f73d001654522063c0449f12d3b9df64 268 Gene3D G3DSA:3.40.190.10 18 148 1.0E-5 T 28-03-2018 AL549_RS01495 f73d001654522063c0449f12d3b9df64 268 Gene3D G3DSA:3.40.190.10 149 268 0.0011 T 28-03-2018 AL549_RS01515 417616e2ac96b63d204d8d1267e2928a 602 SUPERFAMILY SSF109755 372 587 2.09E-13 T 28-03-2018 AL549_RS01515 417616e2ac96b63d204d8d1267e2928a 602 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 44 355 9.4E-71 T 28-03-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 AL549_RS01515 417616e2ac96b63d204d8d1267e2928a 602 Pfam PF02690 Na+/Pi-cotransporter 50 185 2.2E-50 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AL549_RS01515 417616e2ac96b63d204d8d1267e2928a 602 Pfam PF02690 Na+/Pi-cotransporter 203 290 8.3E-16 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AL549_RS01515 417616e2ac96b63d204d8d1267e2928a 602 Gene3D G3DSA:1.20.58.220 500 594 4.4E-4 T 28-03-2018 AL549_RS01515 417616e2ac96b63d204d8d1267e2928a 602 Gene3D G3DSA:1.20.58.220 376 499 3.5E-12 T 28-03-2018 AL549_RS19860 bffe5fdca954a77788e5577deb88e025 179 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 179 2.3E-62 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AL549_RS19860 bffe5fdca954a77788e5577deb88e025 179 Gene3D G3DSA:2.40.50.140 1 121 1.3E-45 T 28-03-2018 AL549_RS19860 bffe5fdca954a77788e5577deb88e025 179 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 38.881 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AL549_RS19860 bffe5fdca954a77788e5577deb88e025 179 SUPERFAMILY SSF50249 4 179 1.3E-60 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS19860 bffe5fdca954a77788e5577deb88e025 179 Pfam PF00436 Single-strand binding protein family 6 105 1.3E-42 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AL549_RS10545 41fe9935ebc77e5aa91acf01aadbbb43 302 Pfam PF13084 Domain of unknown function (DUF3943) 139 248 1.8E-37 T 28-03-2018 IPR025079 Domain of unknown function DUF3943 AL549_RS01950 dea86cc869dd53624ae0aec222f89977 656 Pfam PF11826 Protein of unknown function (DUF3346) 290 514 2.8E-144 T 28-03-2018 IPR021781 Protein of unknown function DUF3346 AL549_RS06045 ad6c91369ca22fd5e8fa9ebd44199438 277 SMART SM00052 15 262 9.3E-13 T 28-03-2018 IPR001633 EAL domain AL549_RS06045 ad6c91369ca22fd5e8fa9ebd44199438 277 SUPERFAMILY SSF141868 27 265 1.96E-48 T 28-03-2018 IPR001633 EAL domain AL549_RS06045 ad6c91369ca22fd5e8fa9ebd44199438 277 Pfam PF00563 EAL domain 28 257 1.3E-43 T 28-03-2018 IPR001633 EAL domain AL549_RS06045 ad6c91369ca22fd5e8fa9ebd44199438 277 Gene3D G3DSA:3.20.20.450 25 265 1.7E-48 T 28-03-2018 IPR001633 EAL domain AL549_RS05790 433d69da9182171111186ba1b275ca71 660 SUPERFAMILY SSF55781 38 185 5.1E-19 T 28-03-2018 IPR029016 GAF domain-like AL549_RS05790 433d69da9182171111186ba1b275ca71 660 SUPERFAMILY SSF141868 400 651 2.35E-82 T 28-03-2018 IPR001633 EAL domain AL549_RS05790 433d69da9182171111186ba1b275ca71 660 Gene3D G3DSA:3.20.20.450 386 644 1.1E-86 T 28-03-2018 IPR001633 EAL domain AL549_RS05790 433d69da9182171111186ba1b275ca71 660 Pfam PF00563 EAL domain 403 635 9.2E-69 T 28-03-2018 IPR001633 EAL domain AL549_RS05790 433d69da9182171111186ba1b275ca71 660 SUPERFAMILY SSF55073 231 384 3.14E-16 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS05790 433d69da9182171111186ba1b275ca71 660 Gene3D G3DSA:3.30.70.270 213 385 3.4E-21 T 28-03-2018 AL549_RS05790 433d69da9182171111186ba1b275ca71 660 SMART SM00267 214 385 1.2E-6 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05790 433d69da9182171111186ba1b275ca71 660 Gene3D G3DSA:3.30.450.40 34 205 7.4E-15 T 28-03-2018 IPR029016 GAF domain-like AL549_RS05790 433d69da9182171111186ba1b275ca71 660 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 380 2.0E-14 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05790 433d69da9182171111186ba1b275ca71 660 SMART SM00052 395 640 2.3E-102 T 28-03-2018 IPR001633 EAL domain AL549_RS05790 433d69da9182171111186ba1b275ca71 660 SMART SM00065 36 181 8.0E-4 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL549_RS01360 f9bfc87a6773aec15ecd35f4f3f81f55 933 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 25 264 1.1E-41 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AL549_RS01360 f9bfc87a6773aec15ecd35f4f3f81f55 933 Gene3D G3DSA:3.40.50.1700 10 285 1.4E-57 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AL549_RS01360 f9bfc87a6773aec15ecd35f4f3f81f55 933 Gene3D G3DSA:3.20.20.300 478 843 4.3E-80 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AL549_RS01360 f9bfc87a6773aec15ecd35f4f3f81f55 933 Pfam PF14310 Fibronectin type III-like domain 329 404 5.8E-17 T 28-03-2018 IPR026891 Fibronectin type III-like domain AL549_RS01360 f9bfc87a6773aec15ecd35f4f3f81f55 933 PRINTS PR00133 Glycosyl hydrolase family 3 signature 712 730 6.5E-28 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AL549_RS01360 f9bfc87a6773aec15ecd35f4f3f81f55 933 PRINTS PR00133 Glycosyl hydrolase family 3 signature 565 584 6.5E-28 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AL549_RS01360 f9bfc87a6773aec15ecd35f4f3f81f55 933 PRINTS PR00133 Glycosyl hydrolase family 3 signature 611 627 6.5E-28 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AL549_RS01360 f9bfc87a6773aec15ecd35f4f3f81f55 933 PRINTS PR00133 Glycosyl hydrolase family 3 signature 539 555 6.5E-28 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AL549_RS01360 f9bfc87a6773aec15ecd35f4f3f81f55 933 PRINTS PR00133 Glycosyl hydrolase family 3 signature 642 658 6.5E-28 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AL549_RS01360 f9bfc87a6773aec15ecd35f4f3f81f55 933 Gene3D G3DSA:2.60.40.10 286 419 6.4E-20 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS01360 f9bfc87a6773aec15ecd35f4f3f81f55 933 SUPERFAMILY SSF52279 25 94 3.27E-34 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AL549_RS01360 f9bfc87a6773aec15ecd35f4f3f81f55 933 SUPERFAMILY SSF52279 125 288 3.27E-34 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AL549_RS01360 f9bfc87a6773aec15ecd35f4f3f81f55 933 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 712 729 - T 28-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AL549_RS01360 f9bfc87a6773aec15ecd35f4f3f81f55 933 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 502 796 1.1E-59 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AL549_RS01360 f9bfc87a6773aec15ecd35f4f3f81f55 933 Gene3D G3DSA:2.60.120.260 844 933 8.9E-4 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS01360 f9bfc87a6773aec15ecd35f4f3f81f55 933 SMART SM01217 329 405 4.7E-22 T 28-03-2018 IPR026891 Fibronectin type III-like domain AL549_RS01360 f9bfc87a6773aec15ecd35f4f3f81f55 933 SUPERFAMILY SSF51445 496 853 5.69E-75 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS09980 719fedefc5643cd868fcd9d73988b3fa 355 Gene3D G3DSA:3.90.1170.30 27 103 5.1E-6 T 28-03-2018 AL549_RS09980 719fedefc5643cd868fcd9d73988b3fa 355 Gene3D G3DSA:2.40.50.100 148 337 2.8E-6 T 28-03-2018 AL549_RS09980 719fedefc5643cd868fcd9d73988b3fa 355 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 338 5.3E-86 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL549_RS09980 719fedefc5643cd868fcd9d73988b3fa 355 SUPERFAMILY SSF111369 47 262 8.5E-38 T 28-03-2018 AL549_RS09980 719fedefc5643cd868fcd9d73988b3fa 355 Gene3D G3DSA:1.10.287.470 104 147 1.5E-8 T 28-03-2018 AL549_RS09980 719fedefc5643cd868fcd9d73988b3fa 355 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 257 1.1E-30 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL549_RS04190 2583e88942da50c30a8b5f271ee2fdc6 348 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 336 4.1E-81 T 28-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AL549_RS04190 2583e88942da50c30a8b5f271ee2fdc6 348 SMART SM01240 7 344 4.5E-137 T 28-03-2018 AL549_RS04190 2583e88942da50c30a8b5f271ee2fdc6 348 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 1.5E-182 T 28-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AL549_RS04190 2583e88942da50c30a8b5f271ee2fdc6 348 SUPERFAMILY SSF51412 6 334 8.77E-100 T 28-03-2018 AL549_RS04190 2583e88942da50c30a8b5f271ee2fdc6 348 Hamap MF_00596 GMP reductase [guaC]. 1 345 54.521 T 28-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AL549_RS04190 2583e88942da50c30a8b5f271ee2fdc6 348 PIRSF PIRSF000235 1 348 3.8E-193 T 28-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AL549_RS04190 2583e88942da50c30a8b5f271ee2fdc6 348 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 28-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AL549_RS04190 2583e88942da50c30a8b5f271ee2fdc6 348 Gene3D G3DSA:3.20.20.70 8 341 6.6E-83 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS23760 93b237097530b7d7265e97b7959c0d84 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 194 2.7E-72 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL549_RS23760 93b237097530b7d7265e97b7959c0d84 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.708 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL549_RS23760 93b237097530b7d7265e97b7959c0d84 203 SMART SM01207 10 185 9.1E-82 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL549_RS23760 93b237097530b7d7265e97b7959c0d84 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 4.9E-49 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL549_RS02530 df9c036038c9fe7d2e8f44bc48cd9274 282 Pfam PF12852 Cupin 3 165 8.9E-34 T 28-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AL549_RS02530 df9c036038c9fe7d2e8f44bc48cd9274 282 Gene3D G3DSA:1.10.10.60 173 233 3.8E-15 T 28-03-2018 AL549_RS02530 df9c036038c9fe7d2e8f44bc48cd9274 282 Gene3D G3DSA:1.10.10.60 234 282 8.1E-15 T 28-03-2018 AL549_RS02530 df9c036038c9fe7d2e8f44bc48cd9274 282 Pfam PF12833 Helix-turn-helix domain 204 281 1.2E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS02530 df9c036038c9fe7d2e8f44bc48cd9274 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 3.4E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS02530 df9c036038c9fe7d2e8f44bc48cd9274 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 3.4E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS02530 df9c036038c9fe7d2e8f44bc48cd9274 282 Gene3D G3DSA:2.60.120.280 11 165 6.0E-18 T 28-03-2018 AL549_RS02530 df9c036038c9fe7d2e8f44bc48cd9274 282 SMART SM00342 197 280 4.1E-28 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS02530 df9c036038c9fe7d2e8f44bc48cd9274 282 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL549_RS02530 df9c036038c9fe7d2e8f44bc48cd9274 282 SUPERFAMILY SSF46689 233 282 8.06E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS02530 df9c036038c9fe7d2e8f44bc48cd9274 282 SUPERFAMILY SSF51215 30 163 1.15E-11 T 28-03-2018 AL549_RS02530 df9c036038c9fe7d2e8f44bc48cd9274 282 SUPERFAMILY SSF46689 180 231 2.57E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS23385 0d0db8db610a63c93cc34480fb4cbf15 212 SUPERFAMILY SSF52507 6 202 9.55E-57 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL549_RS23385 0d0db8db610a63c93cc34480fb4cbf15 212 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 8 201 2.3E-57 T 28-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 AL549_RS23385 0d0db8db610a63c93cc34480fb4cbf15 212 Pfam PF02441 Flavoprotein 6 182 1.1E-24 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL549_RS23385 0d0db8db610a63c93cc34480fb4cbf15 212 Gene3D G3DSA:3.40.50.1950 6 212 3.0E-50 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL549_RS23385 0d0db8db610a63c93cc34480fb4cbf15 212 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 6 203 34.838 T 28-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 AL549_RS00060 27479b083e603821b5a9e03608cd1e1a 262 Gene3D G3DSA:1.10.10.60 157 213 2.5E-9 T 28-03-2018 AL549_RS00060 27479b083e603821b5a9e03608cd1e1a 262 SUPERFAMILY SSF46689 213 260 3.48E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS00060 27479b083e603821b5a9e03608cd1e1a 262 Pfam PF12833 Helix-turn-helix domain 182 260 3.2E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS00060 27479b083e603821b5a9e03608cd1e1a 262 Gene3D G3DSA:1.10.10.60 215 261 1.3E-7 T 28-03-2018 AL549_RS00060 27479b083e603821b5a9e03608cd1e1a 262 SUPERFAMILY SSF51182 16 185 8.36E-11 T 28-03-2018 IPR011051 RmlC-like cupin domain AL549_RS00060 27479b083e603821b5a9e03608cd1e1a 262 Gene3D G3DSA:2.60.120.10 3 156 7.6E-6 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS00060 27479b083e603821b5a9e03608cd1e1a 262 SMART SM00342 176 258 3.3E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS00060 27479b083e603821b5a9e03608cd1e1a 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 6.8E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS00060 27479b083e603821b5a9e03608cd1e1a 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 6.8E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS05920 e3c173540fb50809bab8b1acbd1a06c7 301 Pfam PF03466 LysR substrate binding domain 90 285 4.2E-44 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS05920 e3c173540fb50809bab8b1acbd1a06c7 301 SUPERFAMILY SSF46785 3 111 4.61E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS05920 e3c173540fb50809bab8b1acbd1a06c7 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.8E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS05920 e3c173540fb50809bab8b1acbd1a06c7 301 Gene3D G3DSA:1.10.10.10 2 83 1.1E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS05920 e3c173540fb50809bab8b1acbd1a06c7 301 Gene3D G3DSA:3.40.190.10 182 263 1.1E-16 T 28-03-2018 AL549_RS05920 e3c173540fb50809bab8b1acbd1a06c7 301 Gene3D G3DSA:3.40.190.10 89 181 1.7E-22 T 28-03-2018 AL549_RS05920 e3c173540fb50809bab8b1acbd1a06c7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS05920 e3c173540fb50809bab8b1acbd1a06c7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS05920 e3c173540fb50809bab8b1acbd1a06c7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS05920 e3c173540fb50809bab8b1acbd1a06c7 301 SUPERFAMILY SSF53850 90 286 2.17E-39 T 28-03-2018 AL549_RS18615 0732f18b9450034e563fe892628b5ae4 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 5.8E-57 T 28-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AL549_RS18615 0732f18b9450034e563fe892628b5ae4 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.651 T 28-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AL549_RS18615 0732f18b9450034e563fe892628b5ae4 209 SUPERFAMILY SSF53335 30 209 1.1E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS18615 0732f18b9450034e563fe892628b5ae4 209 PIRSF PIRSF005461 1 209 1.1E-80 T 28-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AL549_RS18615 0732f18b9450034e563fe892628b5ae4 209 Gene3D G3DSA:3.40.50.150 1 209 3.9E-57 T 28-03-2018 AL549_RS05675 d23b2ecee81ff6d7ca727828b67a59bb 483 SMART SM00388 275 342 5.9E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS05675 d23b2ecee81ff6d7ca727828b67a59bb 483 Gene3D G3DSA:3.30.565.10 324 481 1.2E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS05675 d23b2ecee81ff6d7ca727828b67a59bb 483 SUPERFAMILY SSF47384 270 342 3.53E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS05675 d23b2ecee81ff6d7ca727828b67a59bb 483 SUPERFAMILY SSF55874 363 479 1.2E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS05675 d23b2ecee81ff6d7ca727828b67a59bb 483 Pfam PF11884 Domain of unknown function (DUF3404) 18 274 1.2E-109 T 28-03-2018 IPR021821 Protein of unknown function DUF3404 AL549_RS05675 d23b2ecee81ff6d7ca727828b67a59bb 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 385 476 5.0E-9 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS05675 d23b2ecee81ff6d7ca727828b67a59bb 483 SMART SM00387 380 478 5.1E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS05675 d23b2ecee81ff6d7ca727828b67a59bb 483 Gene3D G3DSA:1.10.287.130 267 323 0.0018 T 28-03-2018 AL549_RS11545 88c7c80d520ee8e32477cd5417e71c95 553 Gene3D G3DSA:3.40.640.10 121 386 3.2E-51 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS11545 88c7c80d520ee8e32477cd5417e71c95 553 SUPERFAMILY SSF53383 27 527 1.13E-114 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS11545 88c7c80d520ee8e32477cd5417e71c95 553 Gene3D G3DSA:3.90.1150.10 409 530 1.4E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS11545 88c7c80d520ee8e32477cd5417e71c95 553 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 65 442 6.0E-56 T 28-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AL549_RS11545 88c7c80d520ee8e32477cd5417e71c95 553 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 1.5E-294 T 28-03-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent AL549_RS01125 2d71273b39d9c6d0106b5bd62311fd7a 467 SUPERFAMILY SSF52794 373 466 1.57E-30 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS01125 2d71273b39d9c6d0106b5bd62311fd7a 467 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 376 466 9.8E-17 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS01125 2d71273b39d9c6d0106b5bd62311fd7a 467 Gene3D G3DSA:3.40.50.2300 373 467 1.5E-34 T 28-03-2018 AL549_RS01125 2d71273b39d9c6d0106b5bd62311fd7a 467 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 13 342 5.5E-76 T 28-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AL549_RS01125 2d71273b39d9c6d0106b5bd62311fd7a 467 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 375 459 1.9E-32 T 28-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AL549_RS03125 658e0923d8d5d0d78989d65c866c639d 174 Pfam PF00174 Oxidoreductase molybdopterin binding domain 75 148 3.0E-6 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL549_RS03125 658e0923d8d5d0d78989d65c866c639d 174 Gene3D G3DSA:3.90.420.10 26 174 6.7E-25 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL549_RS03125 658e0923d8d5d0d78989d65c866c639d 174 SUPERFAMILY SSF56524 40 173 9.94E-21 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL549_RS00840 efc84bc7bb9e31c44c70980c7cbf7803 300 SUPERFAMILY SSF53850 90 292 1.81E-44 T 28-03-2018 AL549_RS00840 efc84bc7bb9e31c44c70980c7cbf7803 300 Gene3D G3DSA:3.40.190.10 178 260 5.6E-21 T 28-03-2018 AL549_RS00840 efc84bc7bb9e31c44c70980c7cbf7803 300 SUPERFAMILY SSF46785 3 111 4.95E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00840 efc84bc7bb9e31c44c70980c7cbf7803 300 Gene3D G3DSA:3.40.190.10 89 177 8.1E-14 T 28-03-2018 AL549_RS00840 efc84bc7bb9e31c44c70980c7cbf7803 300 Pfam PF03466 LysR substrate binding domain 88 289 7.8E-42 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS00840 efc84bc7bb9e31c44c70980c7cbf7803 300 Gene3D G3DSA:1.10.10.10 3 83 3.9E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00840 efc84bc7bb9e31c44c70980c7cbf7803 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.1E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS12015 8167820490f92a9d68efd4c6fda7dbf8 269 SUPERFAMILY SSF56784 1 267 3.26E-77 T 28-03-2018 IPR023214 HAD-like domain AL549_RS12015 8167820490f92a9d68efd4c6fda7dbf8 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 3.5E-25 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AL549_RS12015 8167820490f92a9d68efd4c6fda7dbf8 269 Gene3D G3DSA:3.40.50.1000 1 269 2.2E-46 T 28-03-2018 IPR023214 HAD-like domain AL549_RS12015 8167820490f92a9d68efd4c6fda7dbf8 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 4.2E-62 T 28-03-2018 IPR000150 Cof family GO:0016787 AL549_RS12015 8167820490f92a9d68efd4c6fda7dbf8 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 28-03-2018 AL549_RS12015 8167820490f92a9d68efd4c6fda7dbf8 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 1.2E-67 T 28-03-2018 IPR023214 HAD-like domain AL549_RS12015 8167820490f92a9d68efd4c6fda7dbf8 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 28-03-2018 AL549_RS08635 57609c3bf3c3e190daa8baf79ff860af 369 PIRSF PIRSF001259 3 369 1.8E-131 T 28-03-2018 AL549_RS08635 57609c3bf3c3e190daa8baf79ff860af 369 Pfam PF00925 GTP cyclohydrolase II 207 367 4.7E-40 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL549_RS08635 57609c3bf3c3e190daa8baf79ff860af 369 Gene3D G3DSA:3.90.870.10 2 212 1.1E-95 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL549_RS08635 57609c3bf3c3e190daa8baf79ff860af 369 SUPERFAMILY SSF142695 205 367 1.44E-48 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL549_RS08635 57609c3bf3c3e190daa8baf79ff860af 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.88 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS08635 57609c3bf3c3e190daa8baf79ff860af 369 SUPERFAMILY SSF55821 3 202 2.17E-87 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL549_RS08635 57609c3bf3c3e190daa8baf79ff860af 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.5E-85 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS08635 57609c3bf3c3e190daa8baf79ff860af 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 6.4E-76 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS18245 8f5a967d8f520171525699c492e560d1 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 1.5E-141 T 28-03-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-70370 AL549_RS18245 8f5a967d8f520171525699c492e560d1 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 5.0E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS18245 8f5a967d8f520171525699c492e560d1 339 Gene3D G3DSA:3.90.25.10 256 337 1.6E-23 T 28-03-2018 AL549_RS18245 8f5a967d8f520171525699c492e560d1 339 Gene3D G3DSA:3.90.25.10 208 255 2.9E-12 T 28-03-2018 AL549_RS18245 8f5a967d8f520171525699c492e560d1 339 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 9.5E-6 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 AL549_RS18245 8f5a967d8f520171525699c492e560d1 339 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 9.5E-6 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 AL549_RS18245 8f5a967d8f520171525699c492e560d1 339 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 9.5E-6 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 AL549_RS18245 8f5a967d8f520171525699c492e560d1 339 Gene3D G3DSA:3.40.50.720 1 207 1.1E-38 T 28-03-2018 AL549_RS18245 8f5a967d8f520171525699c492e560d1 339 SUPERFAMILY SSF51735 2 336 2.5E-98 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS21630 553ea9e9339beca0273c9b94804056df 175 Gene3D G3DSA:3.40.50.360 1 171 5.7E-18 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS21630 553ea9e9339beca0273c9b94804056df 175 SUPERFAMILY SSF52218 3 172 1.73E-30 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS21630 553ea9e9339beca0273c9b94804056df 175 Pfam PF12724 Flavodoxin domain 5 153 2.9E-49 T 28-03-2018 IPR026816 Flavodoxin domain AL549_RS06050 9173f5f5db699f53541aecbba31005a6 184 Gene3D G3DSA:3.10.290.10 14 93 6.9E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS06050 9173f5f5db699f53541aecbba31005a6 184 SUPERFAMILY SSF55174 18 92 4.56E-17 T 28-03-2018 AL549_RS06050 9173f5f5db699f53541aecbba31005a6 184 Pfam PF13275 S4 domain 29 91 5.5E-22 T 28-03-2018 AL549_RS19800 93f96e29085baaab9482d3117ef0a1a3 157 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS19800 93f96e29085baaab9482d3117ef0a1a3 157 Gene3D G3DSA:3.30.700.10 7 157 2.9E-17 T 28-03-2018 AL549_RS19800 93f96e29085baaab9482d3117ef0a1a3 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.4E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS19800 93f96e29085baaab9482d3117ef0a1a3 157 SUPERFAMILY SSF54523 7 59 1.65E-12 T 28-03-2018 AL549_RS19800 93f96e29085baaab9482d3117ef0a1a3 157 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.1E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS17180 6e3309bc8108ab57b4ce0c69b1836979 163 Pfam PF02674 Colicin V production protein 4 142 6.7E-36 T 28-03-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AL549_RS07365 631cb01b8e7c2cc7f0f20664f1565dc0 418 SUPERFAMILY SSF58104 109 418 9.42E-76 T 28-03-2018 AL549_RS07365 631cb01b8e7c2cc7f0f20664f1565dc0 418 Gene3D G3DSA:1.10.287.950 50 194 5.9E-5 T 28-03-2018 AL549_RS07365 631cb01b8e7c2cc7f0f20664f1565dc0 418 Gene3D G3DSA:1.10.287.950 195 418 1.2E-51 T 28-03-2018 AL549_RS07365 631cb01b8e7c2cc7f0f20664f1565dc0 418 SMART SM00283 156 417 1.1E-67 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS07365 631cb01b8e7c2cc7f0f20664f1565dc0 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 201 384 1.1E-41 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS07365 631cb01b8e7c2cc7f0f20664f1565dc0 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 2.6E-22 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS07365 631cb01b8e7c2cc7f0f20664f1565dc0 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 2.6E-22 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS07365 631cb01b8e7c2cc7f0f20664f1565dc0 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 2.6E-22 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS18730 26c606dc45a84af362cbfec0d51c96fd 639 Gene3D G3DSA:3.20.20.80 258 639 2.0E-134 T 28-03-2018 AL549_RS18730 26c606dc45a84af362cbfec0d51c96fd 639 SUPERFAMILY SSF51445 260 620 2.11E-126 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS18730 26c606dc45a84af362cbfec0d51c96fd 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 3.7E-49 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS18730 26c606dc45a84af362cbfec0d51c96fd 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 283 304 3.7E-49 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS18730 26c606dc45a84af362cbfec0d51c96fd 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 589 606 3.7E-49 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS18730 26c606dc45a84af362cbfec0d51c96fd 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 254 271 3.7E-49 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS18730 26c606dc45a84af362cbfec0d51c96fd 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 353 370 3.7E-49 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS18730 26c606dc45a84af362cbfec0d51c96fd 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 571 587 3.7E-49 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS18730 26c606dc45a84af362cbfec0d51c96fd 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 402 420 3.7E-49 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS18730 26c606dc45a84af362cbfec0d51c96fd 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 424 437 3.7E-49 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS18730 26c606dc45a84af362cbfec0d51c96fd 639 Gene3D G3DSA:3.30.379.10 131 257 9.9E-18 T 28-03-2018 AL549_RS18730 26c606dc45a84af362cbfec0d51c96fd 639 SUPERFAMILY SSF55545 125 259 1.64E-23 T 28-03-2018 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS18730 26c606dc45a84af362cbfec0d51c96fd 639 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 137 256 1.6E-14 T 28-03-2018 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL549_RS18730 26c606dc45a84af362cbfec0d51c96fd 639 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 260 607 1.6E-120 T 28-03-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL549_RS10700 d301fdc783bd10d8607cf9463d82e99f 341 PIRSF PIRSF002465 2 339 2.1E-123 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AL549_RS10700 d301fdc783bd10d8607cf9463d82e99f 341 Pfam PF02504 Fatty acid synthesis protein 5 327 1.4E-97 T 28-03-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 AL549_RS10700 d301fdc783bd10d8607cf9463d82e99f 341 Gene3D G3DSA:3.40.718.10 1 337 1.3E-101 T 28-03-2018 AL549_RS10700 d301fdc783bd10d8607cf9463d82e99f 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 6.6E-104 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AL549_RS10700 d301fdc783bd10d8607cf9463d82e99f 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 135.475 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AL549_RS10700 d301fdc783bd10d8607cf9463d82e99f 341 SUPERFAMILY SSF53659 4 336 3.13E-101 T 28-03-2018 AL549_RS10970 001e2f96003a1cdb9bbe13c1c03a9c3f 374 Gene3D G3DSA:3.40.50.720 192 371 4.2E-46 T 28-03-2018 AL549_RS10970 001e2f96003a1cdb9bbe13c1c03a9c3f 374 Gene3D G3DSA:3.40.50.720 1 191 8.0E-46 T 28-03-2018 AL549_RS10970 001e2f96003a1cdb9bbe13c1c03a9c3f 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 7.9E-46 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL549_RS10970 001e2f96003a1cdb9bbe13c1c03a9c3f 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 3.9E-155 T 28-03-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AL549_RS10970 001e2f96003a1cdb9bbe13c1c03a9c3f 374 SUPERFAMILY SSF52283 305 360 8.5E-67 T 28-03-2018 AL549_RS10970 001e2f96003a1cdb9bbe13c1c03a9c3f 374 SUPERFAMILY SSF52283 1 137 8.5E-67 T 28-03-2018 AL549_RS10970 001e2f96003a1cdb9bbe13c1c03a9c3f 374 PIRSF PIRSF000183 1 371 8.4E-157 T 28-03-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AL549_RS10970 001e2f96003a1cdb9bbe13c1c03a9c3f 374 SMART SM01003 4 137 7.5E-79 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL549_RS10970 001e2f96003a1cdb9bbe13c1c03a9c3f 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 4.3E-83 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL549_RS10970 001e2f96003a1cdb9bbe13c1c03a9c3f 374 SMART SM01002 149 297 9.6E-89 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL549_RS10970 001e2f96003a1cdb9bbe13c1c03a9c3f 374 SUPERFAMILY SSF51735 137 303 1.27E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS20920 2e1501f420d07fd9941fa08e7a817f78 355 Gene3D G3DSA:3.20.20.210 1 355 4.2E-110 T 28-03-2018 AL549_RS20920 2e1501f420d07fd9941fa08e7a817f78 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.539 T 28-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL549_RS20920 2e1501f420d07fd9941fa08e7a817f78 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL549_RS20920 2e1501f420d07fd9941fa08e7a817f78 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 1.9E-141 T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL549_RS20920 2e1501f420d07fd9941fa08e7a817f78 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 6.9E-140 T 28-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL549_RS20920 2e1501f420d07fd9941fa08e7a817f78 355 SUPERFAMILY SSF51726 1 354 1.38E-122 T 28-03-2018 AL549_RS20920 2e1501f420d07fd9941fa08e7a817f78 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL549_RS15255 aba2aca78ef172dfd43bc7f4489d0982 90 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 11 90 1.0E-36 T 28-03-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 AL549_RS15255 aba2aca78ef172dfd43bc7f4489d0982 90 Gene3D G3DSA:3.30.2310.20 8 90 5.4E-29 T 28-03-2018 AL549_RS15255 aba2aca78ef172dfd43bc7f4489d0982 90 SUPERFAMILY SSF143011 9 89 2.35E-28 T 28-03-2018 IPR035095 Toxin RelE-like domain AL549_RS15255 aba2aca78ef172dfd43bc7f4489d0982 90 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 11 90 1.5E-43 T 28-03-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 AL549_RS01730 b6c91362fb217a63bb6a3fb10586d693 93 Gene3D G3DSA:2.60.120.10 3 92 2.0E-35 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS01730 b6c91362fb217a63bb6a3fb10586d693 93 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 1.2E-33 T 28-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase AL549_RS01730 b6c91362fb217a63bb6a3fb10586d693 93 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 93 25.216 T 28-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase AL549_RS01730 b6c91362fb217a63bb6a3fb10586d693 93 SUPERFAMILY SSF51182 1 93 1.01E-33 T 28-03-2018 IPR011051 RmlC-like cupin domain AL549_RS19175 79b0a63878d9f7136eb844f5722da133 426 SUPERFAMILY SSF56935 29 241 6.11E-17 T 28-03-2018 AL549_RS19175 79b0a63878d9f7136eb844f5722da133 426 SUPERFAMILY SSF56935 271 426 6.11E-17 T 28-03-2018 AL549_RS19175 79b0a63878d9f7136eb844f5722da133 426 Gene3D G3DSA:2.40.160.10 22 426 5.6E-31 T 28-03-2018 AL549_RS17835 b37f3a1ff566f9db263a05ad0736041a 280 SUPERFAMILY SSF54713 55 137 2.83E-18 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL549_RS17835 b37f3a1ff566f9db263a05ad0736041a 280 Pfam PF00889 Elongation factor TS 70 260 4.7E-62 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL549_RS17835 b37f3a1ff566f9db263a05ad0736041a 280 SUPERFAMILY SSF54713 141 277 3.92E-46 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL549_RS17835 b37f3a1ff566f9db263a05ad0736041a 280 SUPERFAMILY SSF46934 3 53 2.21E-18 T 28-03-2018 IPR009060 UBA-like GO:0005515 AL549_RS17835 b37f3a1ff566f9db263a05ad0736041a 280 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 28-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL549_RS17835 b37f3a1ff566f9db263a05ad0736041a 280 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 279 2.7E-104 T 28-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL549_RS17835 b37f3a1ff566f9db263a05ad0736041a 280 Gene3D G3DSA:3.30.479.20 115 145 0.026 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL549_RS17835 b37f3a1ff566f9db263a05ad0736041a 280 Gene3D G3DSA:3.30.479.20 57 114 4.2E-11 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL549_RS17835 b37f3a1ff566f9db263a05ad0736041a 280 Hamap MF_00050 Elongation factor Ts [tsf]. 1 279 76.094 T 28-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL549_RS17835 b37f3a1ff566f9db263a05ad0736041a 280 Gene3D G3DSA:1.10.8.10 1 55 5.6E-23 T 28-03-2018 AL549_RS17835 b37f3a1ff566f9db263a05ad0736041a 280 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 28-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL549_RS17835 b37f3a1ff566f9db263a05ad0736041a 280 Gene3D G3DSA:3.30.479.20 146 277 4.3E-42 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL549_RS02745 3ed0e1311ae9959342eb20c628b2f7d1 204 Gene3D G3DSA:1.20.5.140 158 176 3.7E-8 T 28-03-2018 AL549_RS02745 3ed0e1311ae9959342eb20c628b2f7d1 204 SUPERFAMILY SSF53098 2 176 4.8E-53 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS02745 3ed0e1311ae9959342eb20c628b2f7d1 204 Gene3D G3DSA:3.30.420.10 1 157 1.8E-39 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS02745 3ed0e1311ae9959342eb20c628b2f7d1 204 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 7 180 1.3E-28 T 28-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS02745 3ed0e1311ae9959342eb20c628b2f7d1 204 Pfam PF00929 Exonuclease 8 163 1.2E-31 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL549_RS02745 3ed0e1311ae9959342eb20c628b2f7d1 204 SMART SM00479 6 173 1.1E-42 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL549_RS22575 11f0cc8fedfbcd10aa010c51c3ec291f 239 SMART SM00448 5 116 6.1E-45 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS22575 11f0cc8fedfbcd10aa010c51c3ec291f 239 SUPERFAMILY SSF46894 132 234 1.47E-26 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS22575 11f0cc8fedfbcd10aa010c51c3ec291f 239 Pfam PF00072 Response regulator receiver domain 7 117 1.2E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS22575 11f0cc8fedfbcd10aa010c51c3ec291f 239 Gene3D G3DSA:3.40.50.2300 1 129 1.7E-38 T 28-03-2018 AL549_RS22575 11f0cc8fedfbcd10aa010c51c3ec291f 239 SMART SM00862 156 232 8.3E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS22575 11f0cc8fedfbcd10aa010c51c3ec291f 239 SUPERFAMILY SSF52172 3 126 4.41E-42 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS22575 11f0cc8fedfbcd10aa010c51c3ec291f 239 Gene3D G3DSA:1.10.10.10 130 238 6.3E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS22575 11f0cc8fedfbcd10aa010c51c3ec291f 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 3.2E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS21570 0ef3af91017ed0f13876e481ae59e384 368 Gene3D G3DSA:1.20.1600.10 114 291 1.3E-25 T 28-03-2018 AL549_RS21570 0ef3af91017ed0f13876e481ae59e384 368 SUPERFAMILY SSF111369 58 273 5.1E-42 T 28-03-2018 AL549_RS21570 0ef3af91017ed0f13876e481ae59e384 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 269 2.5E-27 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL549_RS21570 0ef3af91017ed0f13876e481ae59e384 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 1.5E-75 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL549_RS21570 0ef3af91017ed0f13876e481ae59e384 368 Gene3D G3DSA:3.90.1170.30 41 113 4.5E-4 T 28-03-2018 AL549_RS19585 bfd0a177e000bd89125c7b861536e923 135 SUPERFAMILY SSF54593 1 131 2.67E-32 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS19585 bfd0a177e000bd89125c7b861536e923 135 Gene3D G3DSA:3.10.180.10 1 133 3.9E-24 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS19585 bfd0a177e000bd89125c7b861536e923 135 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 129 9.6E-10 T 28-03-2018 IPR028973 PhnB-like AL549_RS05255 65a7b1124d66eea6b23bb480b1d41a21 628 SMART SM00283 365 626 4.6E-72 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS05255 65a7b1124d66eea6b23bb480b1d41a21 628 Pfam PF00672 HAMP domain 299 347 5.9E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS05255 65a7b1124d66eea6b23bb480b1d41a21 628 SMART SM00304 296 350 1.2E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS05255 65a7b1124d66eea6b23bb480b1d41a21 628 SUPERFAMILY SSF58104 318 627 3.27E-76 T 28-03-2018 AL549_RS05255 65a7b1124d66eea6b23bb480b1d41a21 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 5.0E-21 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS05255 65a7b1124d66eea6b23bb480b1d41a21 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 521 5.0E-21 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS05255 65a7b1124d66eea6b23bb480b1d41a21 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 490 5.0E-21 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS05255 65a7b1124d66eea6b23bb480b1d41a21 628 Gene3D G3DSA:1.10.287.950 415 628 6.7E-49 T 28-03-2018 AL549_RS05255 65a7b1124d66eea6b23bb480b1d41a21 628 Gene3D G3DSA:1.10.287.950 324 414 4.4E-10 T 28-03-2018 AL549_RS05255 65a7b1124d66eea6b23bb480b1d41a21 628 Gene3D G3DSA:3.30.450.20 28 171 6.3E-11 T 28-03-2018 AL549_RS05255 65a7b1124d66eea6b23bb480b1d41a21 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 434 593 5.0E-40 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS05255 65a7b1124d66eea6b23bb480b1d41a21 628 Pfam PF02743 Cache domain 41 258 2.5E-21 T 28-03-2018 IPR033479 Double Cache domain 1 AL549_RS05255 65a7b1124d66eea6b23bb480b1d41a21 628 Gene3D G3DSA:3.30.450.20 172 271 2.1E-13 T 28-03-2018 AL549_RS02840 7451e873e75733b2bcdda79114bc6604 706 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 123 611 3.7E-73 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL549_RS02840 7451e873e75733b2bcdda79114bc6604 706 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 24 696 2.4E-209 T 28-03-2018 IPR011853 TRAP transporter, 4TM/12TM fusion protein AL549_RS04910 403560bb462be21ec1fd3394d5720419 555 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 1.2E-7 T 28-03-2018 AL549_RS04910 403560bb462be21ec1fd3394d5720419 555 SUPERFAMILY SSF51905 311 454 5.86E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS04910 403560bb462be21ec1fd3394d5720419 555 SUPERFAMILY SSF51905 3 211 5.86E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS04910 403560bb462be21ec1fd3394d5720419 555 SUPERFAMILY SSF54862 456 555 5.1E-26 T 28-03-2018 AL549_RS04910 403560bb462be21ec1fd3394d5720419 555 Gene3D G3DSA:3.50.50.60 1 388 6.1E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS04910 403560bb462be21ec1fd3394d5720419 555 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 452 553 4.4E-46 T 28-03-2018 AL549_RS04910 403560bb462be21ec1fd3394d5720419 555 SUPERFAMILY SSF54373 212 310 2.59E-32 T 28-03-2018 AL549_RS17205 175669ba7f698e61248f6729dffd2b7e 1954 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1909 1949 2.5E-15 T 28-03-2018 IPR020011 Motility protein FimV, C-terminal AL549_RS17205 175669ba7f698e61248f6729dffd2b7e 1954 Gene3D G3DSA:3.10.350.10 67 136 1.0E-6 T 28-03-2018 AL549_RS17205 175669ba7f698e61248f6729dffd2b7e 1954 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 71 142 1.4E-26 T 28-03-2018 IPR020012 Motility protein FimV, N-terminal AL549_RS04870 42d5ee2746e7b00f741ade5701cfd1c2 722 SUPERFAMILY SSF52540 474 719 5.76E-88 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS04870 42d5ee2746e7b00f741ade5701cfd1c2 722 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 28 721 0.0 T 28-03-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AL549_RS04870 42d5ee2746e7b00f741ade5701cfd1c2 722 ProSitePatterns PS00211 ABC transporters family signature. 621 635 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS04870 42d5ee2746e7b00f741ade5701cfd1c2 722 Gene3D G3DSA:1.20.1560.10 140 469 4.5E-48 T 28-03-2018 AL549_RS04870 42d5ee2746e7b00f741ade5701cfd1c2 722 SMART SM00382 509 695 1.4E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS04870 42d5ee2746e7b00f741ade5701cfd1c2 722 Pfam PF03412 Peptidase C39 family 25 120 7.5E-6 T 28-03-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 AL549_RS04870 42d5ee2746e7b00f741ade5701cfd1c2 722 Pfam PF00664 ABC transporter transmembrane region 172 438 5.6E-44 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS04870 42d5ee2746e7b00f741ade5701cfd1c2 722 SUPERFAMILY SSF90123 156 467 1.83E-64 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS04870 42d5ee2746e7b00f741ade5701cfd1c2 722 Gene3D G3DSA:3.90.70.10 19 139 2.4E-8 T 28-03-2018 AL549_RS04870 42d5ee2746e7b00f741ade5701cfd1c2 722 Pfam PF00005 ABC transporter 500 649 8.6E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS04870 42d5ee2746e7b00f741ade5701cfd1c2 722 Gene3D G3DSA:3.40.50.300 470 721 2.4E-74 T 28-03-2018 AL549_RS01025 8da92350266716cb4e367e339b2b519b 108 Pfam PF01638 HxlR-like helix-turn-helix 19 105 8.0E-20 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type AL549_RS01025 8da92350266716cb4e367e339b2b519b 108 SUPERFAMILY SSF46785 8 105 2.47E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01025 8da92350266716cb4e367e339b2b519b 108 Gene3D G3DSA:1.10.10.10 17 108 1.0E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS23690 1b258a46f66d652c97f609f859b46444 610 SUPERFAMILY SSF53697 245 610 3.25E-113 T 28-03-2018 AL549_RS23690 1b258a46f66d652c97f609f859b46444 610 Pfam PF01380 SIS domain 463 592 3.5E-24 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL549_RS23690 1b258a46f66d652c97f609f859b46444 610 Pfam PF01380 SIS domain 290 419 9.5E-33 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL549_RS23690 1b258a46f66d652c97f609f859b46444 610 Pfam PF13522 Glutamine amidotransferase domain 55 174 2.5E-22 T 28-03-2018 AL549_RS23690 1b258a46f66d652c97f609f859b46444 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.452 T 28-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AL549_RS23690 1b258a46f66d652c97f609f859b46444 610 Gene3D G3DSA:3.60.20.10 2 239 6.3E-68 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL549_RS23690 1b258a46f66d652c97f609f859b46444 610 Gene3D G3DSA:3.40.50.10490 460 608 1.7E-49 T 28-03-2018 AL549_RS23690 1b258a46f66d652c97f609f859b46444 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 8.5E-260 T 28-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AL549_RS23690 1b258a46f66d652c97f609f859b46444 610 SUPERFAMILY SSF56235 2 234 3.09E-75 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL549_RS23690 1b258a46f66d652c97f609f859b46444 610 Gene3D G3DSA:3.40.50.10490 240 459 8.4E-62 T 28-03-2018 AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 SUPERFAMILY SSF52540 168 491 1.52E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 843 0.0 T 28-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 665 683 2.7E-31 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 591 609 2.7E-31 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 636 654 2.7E-31 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 698 712 2.7E-31 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 759 832 5.6E-10 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 Pfam PF07724 AAA domain (Cdc48 subfamily) 587 754 3.4E-39 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 Gene3D G3DSA:3.40.50.300 166 351 2.2E-19 T 28-03-2018 AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 SMART SM00382 207 352 9.3E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 SMART SM00382 587 747 7.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 Gene3D G3DSA:1.10.1780.10 1 156 7.2E-18 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 Gene3D G3DSA:3.40.50.300 542 758 1.3E-40 T 28-03-2018 AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 Gene3D G3DSA:1.10.8.60 759 853 2.5E-11 T 28-03-2018 AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 Gene3D G3DSA:1.10.8.60 353 537 5.5E-35 T 28-03-2018 AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 SMART SM01086 759 851 4.5E-6 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 325 2.3E-9 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 SUPERFAMILY SSF52540 536 843 7.09E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 303 315 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AL549_RS05120 284879d2b57726cb1871ada22a437eaa 854 SUPERFAMILY SSF81923 11 128 4.84E-15 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL549_RS05640 de6c80aa6b33743d959df87c52a59114 319 SMART SM00267 140 316 4.6E-59 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05640 de6c80aa6b33743d959df87c52a59114 319 SUPERFAMILY SSF52172 6 159 1.71E-37 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS05640 de6c80aa6b33743d959df87c52a59114 319 SUPERFAMILY SSF55073 156 317 8.11E-48 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS05640 de6c80aa6b33743d959df87c52a59114 319 Pfam PF00072 Response regulator receiver domain 10 117 7.2E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS05640 de6c80aa6b33743d959df87c52a59114 319 Gene3D G3DSA:3.30.70.270 153 319 3.1E-49 T 28-03-2018 AL549_RS05640 de6c80aa6b33743d959df87c52a59114 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 151 312 2.4E-45 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05640 de6c80aa6b33743d959df87c52a59114 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 147 315 3.4E-49 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05640 de6c80aa6b33743d959df87c52a59114 319 SMART SM00448 8 120 7.0E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS05640 de6c80aa6b33743d959df87c52a59114 319 Gene3D G3DSA:3.40.50.2300 5 152 3.6E-36 T 28-03-2018 AL549_RS05350 b4396b68960a654655dd57acb8ac8c47 427 Pfam PF00270 DEAD/DEAH box helicase 25 195 8.7E-51 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL549_RS05350 b4396b68960a654655dd57acb8ac8c47 427 SUPERFAMILY SSF52540 75 356 4.82E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS05350 b4396b68960a654655dd57acb8ac8c47 427 Pfam PF00271 Helicase conserved C-terminal domain 231 339 3.3E-29 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS05350 b4396b68960a654655dd57acb8ac8c47 427 SMART SM00487 20 229 1.6E-56 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS05350 b4396b68960a654655dd57acb8ac8c47 427 Gene3D G3DSA:3.40.50.300 224 384 8.8E-45 T 28-03-2018 AL549_RS05350 b4396b68960a654655dd57acb8ac8c47 427 SMART SM00490 258 339 9.2E-31 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS05350 b4396b68960a654655dd57acb8ac8c47 427 Gene3D G3DSA:3.40.50.300 6 223 1.8E-56 T 28-03-2018 AL549_RS05350 b4396b68960a654655dd57acb8ac8c47 427 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL549_RS15045 09d4ea7c2cadfb92a5d0467adaed5501 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.9E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS02520 aa6113a4a6ce532b36252bc17f8e6952 231 PIRSF PIRSF028137 1 231 3.4E-110 T 28-03-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane AL549_RS23280 aaf414cf98625d7f012e7f495367c76b 291 SUPERFAMILY SSF53790 33 278 2.88E-78 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL549_RS23280 aaf414cf98625d7f012e7f495367c76b 291 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 42 56 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL549_RS23280 aaf414cf98625d7f012e7f495367c76b 291 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 117 150 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL549_RS23280 aaf414cf98625d7f012e7f495367c76b 291 Gene3D G3DSA:3.40.1010.10 36 161 3.2E-35 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL549_RS23280 aaf414cf98625d7f012e7f495367c76b 291 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 39 249 3.8E-45 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL549_RS23280 aaf414cf98625d7f012e7f495367c76b 291 Gene3D G3DSA:3.30.950.10 162 287 4.3E-36 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL549_RS23280 aaf414cf98625d7f012e7f495367c76b 291 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 37 270 1.2E-93 T 28-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL549_RS01500 345445aef5ca9ac42b38f49c2f32f1b9 292 SUPERFAMILY SSF53850 89 290 5.07E-25 T 28-03-2018 AL549_RS01500 345445aef5ca9ac42b38f49c2f32f1b9 292 Gene3D G3DSA:3.40.190.10 79 181 3.3E-10 T 28-03-2018 AL549_RS01500 345445aef5ca9ac42b38f49c2f32f1b9 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.6E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01500 345445aef5ca9ac42b38f49c2f32f1b9 292 Gene3D G3DSA:3.40.190.10 182 263 6.7E-4 T 28-03-2018 AL549_RS01500 345445aef5ca9ac42b38f49c2f32f1b9 292 Gene3D G3DSA:1.10.10.10 1 78 9.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01500 345445aef5ca9ac42b38f49c2f32f1b9 292 Pfam PF03466 LysR substrate binding domain 88 291 3.5E-26 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS01500 345445aef5ca9ac42b38f49c2f32f1b9 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01500 345445aef5ca9ac42b38f49c2f32f1b9 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01500 345445aef5ca9ac42b38f49c2f32f1b9 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS01500 345445aef5ca9ac42b38f49c2f32f1b9 292 SUPERFAMILY SSF46785 2 110 2.39E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS14700 4830bfd2837dda653c157060df8c285f 216 SMART SM00974 121 201 5.0E-10 T 28-03-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding AL549_RS14700 4830bfd2837dda653c157060df8c285f 216 Pfam PF10544 T5orf172 domain 109 202 9.5E-11 T 28-03-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding AL549_RS07790 3b4d31eb93210ec561c2c8e4f9508d6d 264 ProSitePatterns PS00194 Thioredoxin family active site. 140 158 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL549_RS07790 3b4d31eb93210ec561c2c8e4f9508d6d 264 Pfam PF13098 Thioredoxin-like domain 133 261 9.1E-25 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS07790 3b4d31eb93210ec561c2c8e4f9508d6d 264 Pfam PF10411 Disulfide bond isomerase protein N-terminus 51 101 1.1E-12 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AL549_RS07790 3b4d31eb93210ec561c2c8e4f9508d6d 264 Gene3D G3DSA:3.40.30.10 123 264 1.7E-25 T 28-03-2018 AL549_RS07790 3b4d31eb93210ec561c2c8e4f9508d6d 264 SUPERFAMILY SSF52833 123 263 3.86E-38 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS07790 3b4d31eb93210ec561c2c8e4f9508d6d 264 Gene3D G3DSA:3.10.450.70 43 103 1.9E-14 T 28-03-2018 AL549_RS07790 3b4d31eb93210ec561c2c8e4f9508d6d 264 SUPERFAMILY SSF54423 47 102 2.49E-13 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AL549_RS05575 40d7ebe49d34a6a1b2986d30dcb3e9ce 770 SMART SM00304 440 493 1.1E-4 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS05575 40d7ebe49d34a6a1b2986d30dcb3e9ce 770 Gene3D G3DSA:3.30.450.20 53 262 9.6E-11 T 28-03-2018 AL549_RS05575 40d7ebe49d34a6a1b2986d30dcb3e9ce 770 SMART SM00283 508 769 7.5E-72 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS05575 40d7ebe49d34a6a1b2986d30dcb3e9ce 770 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 581 735 1.5E-41 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS05575 40d7ebe49d34a6a1b2986d30dcb3e9ce 770 Pfam PF02743 Cache domain 37 397 1.6E-12 T 28-03-2018 IPR033479 Double Cache domain 1 AL549_RS05575 40d7ebe49d34a6a1b2986d30dcb3e9ce 770 Gene3D G3DSA:3.30.450.20 263 415 4.8E-14 T 28-03-2018 AL549_RS05575 40d7ebe49d34a6a1b2986d30dcb3e9ce 770 Gene3D G3DSA:1.10.287.950 416 542 9.0E-6 T 28-03-2018 AL549_RS05575 40d7ebe49d34a6a1b2986d30dcb3e9ce 770 Gene3D G3DSA:1.10.287.950 543 770 7.6E-52 T 28-03-2018 AL549_RS05575 40d7ebe49d34a6a1b2986d30dcb3e9ce 770 SUPERFAMILY SSF58104 461 770 4.45E-72 T 28-03-2018 AL549_RS07750 37d962ad50e7f2862ea18c57b7c15b3a 61 Pfam PF12065 Protein of unknown function (DUF3545) 1 60 2.7E-27 T 28-03-2018 IPR021932 Protein of unknown function DUF3545 AL549_RS16290 240578cf8980ab78c603e0909d9e63c6 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 262 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL549_RS16290 240578cf8980ab78c603e0909d9e63c6 279 Pfam PF12852 Cupin 2 153 5.1E-21 T 28-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AL549_RS16290 240578cf8980ab78c603e0909d9e63c6 279 SUPERFAMILY SSF51215 31 150 3.4E-7 T 28-03-2018 AL549_RS16290 240578cf8980ab78c603e0909d9e63c6 279 SUPERFAMILY SSF46689 167 218 1.75E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS16290 240578cf8980ab78c603e0909d9e63c6 279 Gene3D G3DSA:1.10.10.60 221 275 3.4E-9 T 28-03-2018 AL549_RS16290 240578cf8980ab78c603e0909d9e63c6 279 Gene3D G3DSA:1.10.10.60 163 220 3.1E-11 T 28-03-2018 AL549_RS16290 240578cf8980ab78c603e0909d9e63c6 279 SMART SM00342 184 266 8.0E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS16290 240578cf8980ab78c603e0909d9e63c6 279 Pfam PF12833 Helix-turn-helix domain 190 266 1.7E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS16290 240578cf8980ab78c603e0909d9e63c6 279 SUPERFAMILY SSF46689 220 265 5.82E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS16290 240578cf8980ab78c603e0909d9e63c6 279 Gene3D G3DSA:2.60.120.280 25 153 8.2E-13 T 28-03-2018 AL549_RS03090 877e523e01a4b1a7918b4fed8cd5b474 407 Pfam PF07690 Major Facilitator Superfamily 20 246 1.7E-9 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS03090 877e523e01a4b1a7918b4fed8cd5b474 407 Pfam PF07690 Major Facilitator Superfamily 252 400 1.9E-10 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS03090 877e523e01a4b1a7918b4fed8cd5b474 407 Gene3D G3DSA:1.20.1250.20 212 406 1.1E-15 T 28-03-2018 AL549_RS03090 877e523e01a4b1a7918b4fed8cd5b474 407 Gene3D G3DSA:1.20.1250.20 9 206 4.2E-15 T 28-03-2018 AL549_RS03090 877e523e01a4b1a7918b4fed8cd5b474 407 SUPERFAMILY SSF103473 16 402 2.09E-35 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS22320 41c80f1048dbf1dfb2635d000dd2a34b 260 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 167 181 - T 28-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AL549_RS22320 41c80f1048dbf1dfb2635d000dd2a34b 260 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 45 60 - T 28-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AL549_RS22320 41c80f1048dbf1dfb2635d000dd2a34b 260 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 25 259 38.268 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AL549_RS22320 41c80f1048dbf1dfb2635d000dd2a34b 260 Pfam PF01209 ubiE/COQ5 methyltransferase family 26 259 1.1E-102 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AL549_RS22320 41c80f1048dbf1dfb2635d000dd2a34b 260 Gene3D G3DSA:3.40.50.150 4 259 1.2E-47 T 28-03-2018 AL549_RS22320 41c80f1048dbf1dfb2635d000dd2a34b 260 SUPERFAMILY SSF53335 27 258 2.01E-52 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS22320 41c80f1048dbf1dfb2635d000dd2a34b 260 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 34 259 1.5E-82 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AL549_RS08820 1c898ed64886f0d98cacc6106d3260bf 264 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 21 173 25.138 T 28-03-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 AL549_RS08820 1c898ed64886f0d98cacc6106d3260bf 264 Gene3D G3DSA:3.30.70.1070 189 261 8.0E-6 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL549_RS08820 1c898ed64886f0d98cacc6106d3260bf 264 SUPERFAMILY SSF50685 83 171 1.12E-10 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AL549_RS08820 1c898ed64886f0d98cacc6106d3260bf 264 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 83 251 1.9E-46 T 28-03-2018 IPR012997 Rare lipoprotein A AL549_RS08820 1c898ed64886f0d98cacc6106d3260bf 264 Pfam PF05036 Sporulation related domain 187 258 9.5E-10 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL549_RS08820 1c898ed64886f0d98cacc6106d3260bf 264 SUPERFAMILY SSF110997 186 258 2.62E-11 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL549_RS08820 1c898ed64886f0d98cacc6106d3260bf 264 Gene3D G3DSA:2.40.40.10 61 173 1.8E-26 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AL549_RS08820 1c898ed64886f0d98cacc6106d3260bf 264 Pfam PF03330 Lytic transglycolase 81 170 5.3E-28 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AL549_RS22380 10e216d7d9937075392fc9d61290649b 181 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 174 16.362 T 28-03-2018 IPR007336 Der GTPase activator GO:0005096 AL549_RS22380 10e216d7d9937075392fc9d61290649b 181 Pfam PF04220 Der GTPase activator (YihI) 21 171 1.6E-43 T 28-03-2018 IPR007336 Der GTPase activator GO:0005096 AL549_RS01820 eafc76d7cf5310fd64462782f1cd12dd 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 28-03-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 AL549_RS01820 eafc76d7cf5310fd64462782f1cd12dd 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 224 6.4E-20 T 28-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AL549_RS01820 eafc76d7cf5310fd64462782f1cd12dd 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 1.7E-139 T 28-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 AL549_RS01820 eafc76d7cf5310fd64462782f1cd12dd 266 Gene3D G3DSA:3.40.50.1360 1 265 1.5E-85 T 28-03-2018 AL549_RS01820 eafc76d7cf5310fd64462782f1cd12dd 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 41.134 T 28-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 AL549_RS01820 eafc76d7cf5310fd64462782f1cd12dd 266 SUPERFAMILY SSF100950 1 262 1.1E-103 T 28-03-2018 AL549_RS08585 1aceeb7889218eb324565f7a6edcefdc 490 Pfam PF07687 Peptidase dimerisation domain 211 296 4.3E-9 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL549_RS08585 1aceeb7889218eb324565f7a6edcefdc 490 PIRSF PIRSF016599 5 489 1.9E-216 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL549_RS08585 1aceeb7889218eb324565f7a6edcefdc 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 8.2E-88 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL549_RS08585 1aceeb7889218eb324565f7a6edcefdc 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 8.2E-88 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL549_RS08585 1aceeb7889218eb324565f7a6edcefdc 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 8.2E-88 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL549_RS08585 1aceeb7889218eb324565f7a6edcefdc 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 8.2E-88 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL549_RS08585 1aceeb7889218eb324565f7a6edcefdc 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 8.2E-88 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL549_RS08585 1aceeb7889218eb324565f7a6edcefdc 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 8.2E-88 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL549_RS08585 1aceeb7889218eb324565f7a6edcefdc 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 8.2E-88 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL549_RS08585 1aceeb7889218eb324565f7a6edcefdc 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 8.2E-88 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL549_RS08585 1aceeb7889218eb324565f7a6edcefdc 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 8.2E-88 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL549_RS08585 1aceeb7889218eb324565f7a6edcefdc 490 SUPERFAMILY SSF53187 401 486 4.98E-62 T 28-03-2018 AL549_RS08585 1aceeb7889218eb324565f7a6edcefdc 490 SUPERFAMILY SSF53187 15 186 4.98E-62 T 28-03-2018 AL549_RS08585 1aceeb7889218eb324565f7a6edcefdc 490 Gene3D G3DSA:3.40.630.10 2 291 4.1E-38 T 28-03-2018 AL549_RS08585 1aceeb7889218eb324565f7a6edcefdc 490 Gene3D G3DSA:3.40.630.10 292 489 1.6E-12 T 28-03-2018 AL549_RS08585 1aceeb7889218eb324565f7a6edcefdc 490 Pfam PF01546 Peptidase family M20/M25/M40 77 477 6.8E-20 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL549_RS08585 1aceeb7889218eb324565f7a6edcefdc 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 13 486 7.4E-183 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL549_RS18250 4a55a1f9a35cd6958d77e35b1d473e0b 332 SMART SM00354 1 66 3.2E-13 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS18250 4a55a1f9a35cd6958d77e35b1d473e0b 332 Gene3D G3DSA:3.40.50.2300 174 305 2.8E-31 T 28-03-2018 AL549_RS18250 4a55a1f9a35cd6958d77e35b1d473e0b 332 Gene3D G3DSA:1.10.260.40 2 57 7.9E-18 T 28-03-2018 AL549_RS18250 4a55a1f9a35cd6958d77e35b1d473e0b 332 SUPERFAMILY SSF47413 3 52 1.97E-12 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS18250 4a55a1f9a35cd6958d77e35b1d473e0b 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 AL549_RS18250 4a55a1f9a35cd6958d77e35b1d473e0b 332 Gene3D G3DSA:3.40.50.2300 58 173 6.5E-10 T 28-03-2018 AL549_RS18250 4a55a1f9a35cd6958d77e35b1d473e0b 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 3.7E-17 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS18250 4a55a1f9a35cd6958d77e35b1d473e0b 332 Pfam PF13377 Periplasmic binding protein-like domain 167 326 2.1E-32 T 28-03-2018 AL549_RS18250 4a55a1f9a35cd6958d77e35b1d473e0b 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.8E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS18250 4a55a1f9a35cd6958d77e35b1d473e0b 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.8E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS18250 4a55a1f9a35cd6958d77e35b1d473e0b 332 SUPERFAMILY SSF53822 76 320 1.73E-42 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS11470 15820b589f066dc90b72f626ac31f3e4 400 SUPERFAMILY SSF103473 13 398 9.16E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS11470 15820b589f066dc90b72f626ac31f3e4 400 Gene3D G3DSA:1.20.1250.20 5 204 2.8E-32 T 28-03-2018 AL549_RS11470 15820b589f066dc90b72f626ac31f3e4 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 17 394 2.5E-118 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AL549_RS11470 15820b589f066dc90b72f626ac31f3e4 400 Gene3D G3DSA:1.20.1250.20 205 399 2.6E-15 T 28-03-2018 AL549_RS11470 15820b589f066dc90b72f626ac31f3e4 400 Pfam PF07690 Major Facilitator Superfamily 24 363 1.0E-48 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 Pfam PF01168 Alanine racemase, N-terminal domain 22 233 5.6E-69 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 Gene3D G3DSA:2.40.37.10 231 372 7.7E-57 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 TIGRFAM TIGR00492 alr: alanine racemase 17 370 4.6E-128 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 PRINTS PR00992 Alanine racemase signature 353 366 1.6E-68 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 PRINTS PR00992 Alanine racemase signature 134 146 1.6E-68 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 PRINTS PR00992 Alanine racemase signature 301 318 1.6E-68 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 PRINTS PR00992 Alanine racemase signature 206 233 1.6E-68 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 PRINTS PR00992 Alanine racemase signature 263 278 1.6E-68 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 PRINTS PR00992 Alanine racemase signature 280 295 1.6E-68 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 PRINTS PR00992 Alanine racemase signature 74 92 1.6E-68 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 PRINTS PR00992 Alanine racemase signature 169 180 1.6E-68 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 PRINTS PR00992 Alanine racemase signature 40 56 1.6E-68 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 Hamap MF_01201 Alanine racemase. 15 371 34.946 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 Gene3D G3DSA:3.20.20.10 15 230 1.1E-44 T 28-03-2018 IPR029066 PLP-binding barrel AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 45 55 - T 28-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 SUPERFAMILY SSF50621 241 370 1.64E-46 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 SMART SM01005 247 371 3.1E-67 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 SUPERFAMILY SSF51419 22 248 2.88E-69 T 28-03-2018 IPR029066 PLP-binding barrel AL549_RS20035 0b38414dde537614228e6a2718a9cbdf 372 Pfam PF00842 Alanine racemase, C-terminal domain 247 370 7.5E-42 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS23155 be170dc137fffee7266abf9038e75abd 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 5.0E-39 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23155 be170dc137fffee7266abf9038e75abd 84 SUPERFAMILY SSF50249 6 83 5.14E-34 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS23155 be170dc137fffee7266abf9038e75abd 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.1E-14 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23155 be170dc137fffee7266abf9038e75abd 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.1E-14 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23155 be170dc137fffee7266abf9038e75abd 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.1E-14 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23155 be170dc137fffee7266abf9038e75abd 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 28-03-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23155 be170dc137fffee7266abf9038e75abd 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.224 T 28-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23155 be170dc137fffee7266abf9038e75abd 84 Gene3D G3DSA:2.40.50.140 5 82 7.6E-34 T 28-03-2018 AL549_RS23155 be170dc137fffee7266abf9038e75abd 84 Pfam PF00366 Ribosomal protein S17 10 77 1.0E-34 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23155 be170dc137fffee7266abf9038e75abd 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 2.7E-38 T 28-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS10800 40279ae3a7f65c301d0a2cfae81c0c02 313 SMART SM00448 184 305 2.2E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS10800 40279ae3a7f65c301d0a2cfae81c0c02 313 Gene3D G3DSA:2.40.50.180 39 103 4.9E-17 T 28-03-2018 AL549_RS10800 40279ae3a7f65c301d0a2cfae81c0c02 313 SUPERFAMILY SSF50341 16 161 1.57E-33 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS10800 40279ae3a7f65c301d0a2cfae81c0c02 313 PIRSF PIRSF002867 1 312 6.7E-104 T 28-03-2018 IPR024181 Chemotaxis response regulator CheV AL549_RS10800 40279ae3a7f65c301d0a2cfae81c0c02 313 Pfam PF00072 Response regulator receiver domain 186 303 1.2E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS10800 40279ae3a7f65c301d0a2cfae81c0c02 313 SMART SM00260 17 158 3.1E-30 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS10800 40279ae3a7f65c301d0a2cfae81c0c02 313 SUPERFAMILY SSF52172 183 309 6.69E-22 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS10800 40279ae3a7f65c301d0a2cfae81c0c02 313 Gene3D G3DSA:2.30.30.40 104 152 9.1E-10 T 28-03-2018 AL549_RS10800 40279ae3a7f65c301d0a2cfae81c0c02 313 Pfam PF01584 CheW-like domain 21 160 1.5E-35 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS10800 40279ae3a7f65c301d0a2cfae81c0c02 313 Gene3D G3DSA:3.40.50.2300 176 312 6.7E-21 T 28-03-2018 AL549_RS06985 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 SUPERFAMILY SSF56601 11 282 3.59E-83 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL549_RS06985 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 262 1.4E-83 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AL549_RS06985 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 282 372 9.2E-23 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL549_RS06985 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 SUPERFAMILY SSF69189 282 374 6.67E-24 T 28-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL549_RS06985 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 Gene3D G3DSA:2.60.410.10 302 372 1.3E-18 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL549_RS06985 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.0E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL549_RS06985 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 138 1.0E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL549_RS06985 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 148 161 1.0E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL549_RS06985 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 Gene3D G3DSA:3.40.710.10 11 301 6.3E-56 T 28-03-2018 AL549_RS06985 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 SMART SM00936 282 372 4.5E-30 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL549_RS01955 10e9690a115850505e706d0c54439670 405 Pfam PF13614 AAA domain 110 296 5.4E-23 T 28-03-2018 IPR025669 AAA domain AL549_RS01955 10e9690a115850505e706d0c54439670 405 SUPERFAMILY SSF52540 108 368 1.68E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS01955 10e9690a115850505e706d0c54439670 405 Gene3D G3DSA:3.40.50.300 107 403 2.2E-38 T 28-03-2018 AL549_RS08810 5e0c5681789783d54870abe1a132d099 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.438 T 28-03-2018 IPR007454 Uncharacterised protein family UPF0250 AL549_RS08810 5e0c5681789783d54870abe1a132d099 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 3.0E-29 T 28-03-2018 IPR007454 Uncharacterised protein family UPF0250 AL549_RS08810 5e0c5681789783d54870abe1a132d099 92 SUPERFAMILY SSF117991 7 92 6.93E-31 T 28-03-2018 IPR027471 YbeD-like domain AL549_RS08810 5e0c5681789783d54870abe1a132d099 92 Gene3D G3DSA:3.30.70.260 10 92 9.5E-30 T 28-03-2018 AL549_RS17225 f1a8f9a4e5b8a658f9412fbc9079d9b8 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 661 27.673 T 28-03-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 AL549_RS17225 f1a8f9a4e5b8a658f9412fbc9079d9b8 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 4.9E-45 T 28-03-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 AL549_RS17225 f1a8f9a4e5b8a658f9412fbc9079d9b8 672 SUPERFAMILY SSF51905 266 481 7.77E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS17225 f1a8f9a4e5b8a658f9412fbc9079d9b8 672 SUPERFAMILY SSF51905 574 663 7.77E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS17225 f1a8f9a4e5b8a658f9412fbc9079d9b8 672 Pfam PF01266 FAD dependent oxidoreductase 266 636 6.3E-44 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL549_RS17225 f1a8f9a4e5b8a658f9412fbc9079d9b8 672 Gene3D G3DSA:3.40.50.150 7 252 4.2E-81 T 28-03-2018 AL549_RS17225 f1a8f9a4e5b8a658f9412fbc9079d9b8 672 Gene3D G3DSA:3.50.50.60 253 672 4.1E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS17225 f1a8f9a4e5b8a658f9412fbc9079d9b8 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 666 1.0E-153 T 28-03-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 SUPERFAMILY SSF81901 46 121 1.28E-5 T 28-03-2018 AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 Gene3D G3DSA:1.25.40.10 59 116 0.073 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 SMART SM00671 237 278 6.4 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 SMART SM00671 96 127 13.0 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 SMART SM00671 128 163 3.6E-8 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 SMART SM00671 279 314 3.5E-6 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 SMART SM00671 164 199 4.6E-7 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 SMART SM00671 200 235 1.2E-5 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 SMART SM00671 60 95 300.0 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 Pfam PF08238 Sel1 repeat 129 163 6.8E-6 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 Pfam PF08238 Sel1 repeat 280 314 1.5E-6 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 Pfam PF08238 Sel1 repeat 260 275 0.79 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 Pfam PF08238 Sel1 repeat 201 235 0.0024 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 Pfam PF08238 Sel1 repeat 165 199 4.6E-7 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 Pfam PF08238 Sel1 repeat 112 127 160.0 T 28-03-2018 IPR006597 Sel1-like repeat AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 Gene3D G3DSA:2.60.40.1180 158 244 1.3E-21 T 28-03-2018 AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 Gene3D G3DSA:2.60.40.1180 245 346 1.1E-16 T 28-03-2018 AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 Gene3D G3DSA:2.60.40.1180 117 157 5.5E-13 T 28-03-2018 AL549_RS02580 a7a95576bc50a11e07da2e4664d79f14 347 SUPERFAMILY SSF81901 102 318 3.23E-46 T 28-03-2018 AL549_RS20825 32bce86ddffcccb323644d0f2107dbae 211 SMART SM00479 29 202 1.5E-24 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL549_RS20825 32bce86ddffcccb323644d0f2107dbae 211 Pfam PF00929 Exonuclease 31 193 4.7E-20 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL549_RS20825 32bce86ddffcccb323644d0f2107dbae 211 Gene3D G3DSA:3.30.420.10 19 202 9.8E-30 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS20825 32bce86ddffcccb323644d0f2107dbae 211 SUPERFAMILY SSF53098 27 198 1.3E-35 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS06925 b00158fa919dd7aed2b01b9c3ce5651f 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 276 68.602 T 28-03-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein AL549_RS06925 b00158fa919dd7aed2b01b9c3ce5651f 277 Pfam PF03618 Kinase/pyrophosphorylase 10 267 7.5E-72 T 28-03-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AL549_RS06925 b00158fa919dd7aed2b01b9c3ce5651f 277 Gene3D G3DSA:3.40.50.300 185 274 0.0065 T 28-03-2018 AL549_RS06925 b00158fa919dd7aed2b01b9c3ce5651f 277 Gene3D G3DSA:3.40.50.300 153 184 0.34 T 28-03-2018 AL549_RS14790 ffb1766136d8231a24746c31c03c9f7a 55 Pfam PF11665 Protein of unknown function (DUF3265) 10 36 2.3E-6 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS22540 452973842df92354f2efe83ed98dd93d 184 Pfam PF00293 NUDIX domain 47 155 9.3E-16 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL549_RS22540 452973842df92354f2efe83ed98dd93d 184 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL549_RS22540 452973842df92354f2efe83ed98dd93d 184 PRINTS PR00502 NUDIX hydrolase family signature 89 104 7.3E-5 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL549_RS22540 452973842df92354f2efe83ed98dd93d 184 PRINTS PR00502 NUDIX hydrolase family signature 75 89 7.3E-5 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL549_RS22540 452973842df92354f2efe83ed98dd93d 184 SUPERFAMILY SSF55811 7 178 2.98E-38 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL549_RS22540 452973842df92354f2efe83ed98dd93d 184 Gene3D G3DSA:3.90.79.10 7 184 2.4E-34 T 28-03-2018 AL549_RS01275 921e6b585bbb2f1c5951900231b2366f 502 SUPERFAMILY SSF52540 244 490 2.03E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS01275 921e6b585bbb2f1c5951900231b2366f 502 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS01275 921e6b585bbb2f1c5951900231b2366f 502 Gene3D G3DSA:3.40.50.300 5 236 5.9E-48 T 28-03-2018 AL549_RS01275 921e6b585bbb2f1c5951900231b2366f 502 SMART SM00382 284 479 2.1 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS01275 921e6b585bbb2f1c5951900231b2366f 502 SMART SM00382 34 221 3.7E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS01275 921e6b585bbb2f1c5951900231b2366f 502 Pfam PF00005 ABC transporter 276 430 2.2E-18 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS01275 921e6b585bbb2f1c5951900231b2366f 502 Pfam PF00005 ABC transporter 25 174 4.6E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS01275 921e6b585bbb2f1c5951900231b2366f 502 Gene3D G3DSA:3.40.50.300 255 496 1.1E-32 T 28-03-2018 AL549_RS01275 921e6b585bbb2f1c5951900231b2366f 502 SUPERFAMILY SSF52540 8 229 1.11E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS19185 f028a40c7add705a3467e67e88a709a1 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 2.3E-98 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL549_RS19185 f028a40c7add705a3467e67e88a709a1 243 SUPERFAMILY SSF63892 4 241 2.09E-101 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL549_RS19185 f028a40c7add705a3467e67e88a709a1 243 Gene3D G3DSA:3.20.20.70 4 238 7.3E-106 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS19185 f028a40c7add705a3467e67e88a709a1 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.7E-105 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL549_RS19185 f028a40c7add705a3467e67e88a709a1 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.521 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL549_RS18155 f73f735e086a51194b4a51b781e391b5 104 Gene3D G3DSA:1.10.10.710 22 83 2.6E-22 T 28-03-2018 AL549_RS18155 f73f735e086a51194b4a51b781e391b5 104 Pfam PF07130 YebG protein 1 72 1.7E-31 T 28-03-2018 IPR009813 Uncharacterised protein family YebG AL549_RS12325 8ddc37272380ce4b8b181adf63f7a4b1 280 SUPERFAMILY SSF50249 174 277 2.63E-30 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS12325 8ddc37272380ce4b8b181adf63f7a4b1 280 Gene3D G3DSA:2.40.50.140 188 279 4.0E-20 T 28-03-2018 AL549_RS12325 8ddc37272380ce4b8b181adf63f7a4b1 280 Pfam PF01068 ATP dependent DNA ligase domain 41 198 2.2E-7 T 28-03-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 AL549_RS12325 8ddc37272380ce4b8b181adf63f7a4b1 280 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 175 198 - T 28-03-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 AL549_RS12325 8ddc37272380ce4b8b181adf63f7a4b1 280 SUPERFAMILY SSF56091 27 198 2.24E-38 T 28-03-2018 AL549_RS12325 8ddc37272380ce4b8b181adf63f7a4b1 280 Gene3D G3DSA:3.30.470.30 51 140 7.7E-17 T 28-03-2018 AL549_RS12325 8ddc37272380ce4b8b181adf63f7a4b1 280 Gene3D G3DSA:3.30.1490.70 141 187 2.3E-8 T 28-03-2018 AL549_RS12325 8ddc37272380ce4b8b181adf63f7a4b1 280 Pfam PF14743 DNA ligase OB-like domain 212 277 2.5E-26 T 28-03-2018 IPR029319 DNA ligase, OB-like domain AL549_RS18215 b4bc46296d458249c9776412f717b8d6 110 Pfam PF01588 Putative tRNA binding domain 14 107 1.3E-29 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AL549_RS18215 b4bc46296d458249c9776412f717b8d6 110 Gene3D G3DSA:2.40.50.140 7 110 8.2E-33 T 28-03-2018 AL549_RS18215 b4bc46296d458249c9776412f717b8d6 110 SUPERFAMILY SSF50249 4 109 7.35E-32 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS09525 acf1ba301268d050699d5fd0bbfaf874 1134 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1082 1123 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL549_RS09525 acf1ba301268d050699d5fd0bbfaf874 1134 Pfam PF12833 Helix-turn-helix domain 1052 1127 6.7E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS09525 acf1ba301268d050699d5fd0bbfaf874 1134 SUPERFAMILY SSF63829 379 559 3.49E-14 T 28-03-2018 AL549_RS09525 acf1ba301268d050699d5fd0bbfaf874 1134 SUPERFAMILY SSF46689 1081 1128 1.21E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS09525 acf1ba301268d050699d5fd0bbfaf874 1134 Gene3D G3DSA:3.30.565.10 849 1004 4.7E-5 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS09525 acf1ba301268d050699d5fd0bbfaf874 1134 SUPERFAMILY SSF101898 209 434 1.8E-9 T 28-03-2018 AL549_RS09525 acf1ba301268d050699d5fd0bbfaf874 1134 Gene3D G3DSA:1.10.10.60 1080 1130 3.0E-11 T 28-03-2018 AL549_RS09525 acf1ba301268d050699d5fd0bbfaf874 1134 Gene3D G3DSA:2.130.10.10 23 235 0.0012 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL549_RS09525 acf1ba301268d050699d5fd0bbfaf874 1134 Gene3D G3DSA:2.130.10.10 236 374 3.6E-11 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL549_RS09525 acf1ba301268d050699d5fd0bbfaf874 1134 Gene3D G3DSA:2.130.10.10 376 699 2.2E-16 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL549_RS09525 acf1ba301268d050699d5fd0bbfaf874 1134 Gene3D G3DSA:1.10.10.60 1026 1079 1.2E-7 T 28-03-2018 AL549_RS09525 acf1ba301268d050699d5fd0bbfaf874 1134 SMART SM00342 1045 1127 8.5E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS05305 c6d2b9f33c0b4bfa2d1647505d60aaf1 322 SUPERFAMILY SSF161098 106 304 3.66E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS05305 c6d2b9f33c0b4bfa2d1647505d60aaf1 322 Gene3D G3DSA:1.10.3720.10 20 318 2.3E-28 T 28-03-2018 AL549_RS05305 c6d2b9f33c0b4bfa2d1647505d60aaf1 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 130 303 1.8E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS19905 49c4586737ca37493c510eb8c2129f0c 444 Pfam PF00999 Sodium/hydrogen exchanger family 14 416 4.7E-56 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL549_RS11245 6e3b3d094798180612f5b98a2be6d2ff 305 Pfam PF13469 Sulfotransferase family 15 263 1.9E-14 T 28-03-2018 AL549_RS11245 6e3b3d094798180612f5b98a2be6d2ff 305 Gene3D G3DSA:3.40.50.300 13 301 1.2E-23 T 28-03-2018 AL549_RS11245 6e3b3d094798180612f5b98a2be6d2ff 305 SUPERFAMILY SSF52540 127 275 3.8E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11245 6e3b3d094798180612f5b98a2be6d2ff 305 SUPERFAMILY SSF52540 13 59 3.8E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06485 2ec32544425649b8e665863097a247be 151 Gene3D G3DSA:3.90.79.10 5 146 1.6E-21 T 28-03-2018 AL549_RS06485 2ec32544425649b8e665863097a247be 151 SUPERFAMILY SSF55811 7 136 2.71E-24 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL549_RS06485 2ec32544425649b8e665863097a247be 151 Pfam PF00293 NUDIX domain 12 126 6.8E-19 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL549_RS19325 c15815bc77dc1913d9578fbf02019df9 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 2.3E-110 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL549_RS19325 c15815bc77dc1913d9578fbf02019df9 358 SUPERFAMILY SSF51569 4 356 6.45E-129 T 28-03-2018 AL549_RS19325 c15815bc77dc1913d9578fbf02019df9 358 PIRSF PIRSF001359 13 358 1.2E-94 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL549_RS19325 c15815bc77dc1913d9578fbf02019df9 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 2.4E-174 T 28-03-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 AL549_RS19325 c15815bc77dc1913d9578fbf02019df9 358 Gene3D G3DSA:3.20.20.70 4 357 4.4E-100 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS19325 c15815bc77dc1913d9578fbf02019df9 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL549_RS19325 c15815bc77dc1913d9578fbf02019df9 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL549_RS19325 c15815bc77dc1913d9578fbf02019df9 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 5.0E-89 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL549_RS00780 b06cfc82916df645acfbd03aec2d0624 147 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.4E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS00780 b06cfc82916df645acfbd03aec2d0624 147 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.4E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS00780 b06cfc82916df645acfbd03aec2d0624 147 Gene3D G3DSA:1.10.10.60 1 39 1.4E-6 T 28-03-2018 AL549_RS00780 b06cfc82916df645acfbd03aec2d0624 147 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 3.1E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS00780 b06cfc82916df645acfbd03aec2d0624 147 Gene3D G3DSA:1.10.260.40 40 67 1.2E-7 T 28-03-2018 AL549_RS00780 b06cfc82916df645acfbd03aec2d0624 147 Gene3D G3DSA:1.10.287.790 68 101 3.7E-9 T 28-03-2018 IPR027404 LuxT regulator, helix hairpin domain AL549_RS00780 b06cfc82916df645acfbd03aec2d0624 147 SUPERFAMILY SSF46689 2 74 1.64E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS17565 8778c9f5a51e0e5c2f0491a5de1ba615 115 SUPERFAMILY SSF52833 2 114 6.47E-37 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS17565 8778c9f5a51e0e5c2f0491a5de1ba615 115 Gene3D G3DSA:3.40.30.10 2 115 2.4E-40 T 28-03-2018 AL549_RS17565 8778c9f5a51e0e5c2f0491a5de1ba615 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 113 5.2E-32 T 28-03-2018 IPR006504 Transcriptional regulator Spx/MgsR AL549_RS17565 8778c9f5a51e0e5c2f0491a5de1ba615 115 Pfam PF03960 ArsC family 6 113 6.5E-20 T 28-03-2018 IPR006660 Arsenate reductase-like AL549_RS18065 18bbf3ef431660a0224b7b9a4273bde6 197 Gene3D G3DSA:1.10.10.10 105 195 1.7E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS18065 18bbf3ef431660a0224b7b9a4273bde6 197 SUPERFAMILY SSF88946 9 117 2.94E-26 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS18065 18bbf3ef431660a0224b7b9a4273bde6 197 Pfam PF04545 Sigma-70, region 4 142 190 2.9E-14 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS18065 18bbf3ef431660a0224b7b9a4273bde6 197 Gene3D G3DSA:1.10.1740.10 11 104 1.4E-20 T 28-03-2018 AL549_RS18065 18bbf3ef431660a0224b7b9a4273bde6 197 SUPERFAMILY SSF88659 130 192 5.05E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS18065 18bbf3ef431660a0224b7b9a4273bde6 197 Pfam PF04542 Sigma-70 region 2 36 102 4.7E-16 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS18065 18bbf3ef431660a0224b7b9a4273bde6 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 190 1.0E-27 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS07920 190019de9425fa613d94680666853239 560 Pfam PF13492 GAF domain 241 351 5.8E-7 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL549_RS07920 190019de9425fa613d94680666853239 560 SUPERFAMILY SSF55874 420 553 4.16E-12 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS07920 190019de9425fa613d94680666853239 560 Gene3D G3DSA:3.30.565.10 378 555 5.7E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS07920 190019de9425fa613d94680666853239 560 SUPERFAMILY SSF55781 227 351 2.4E-7 T 28-03-2018 IPR029016 GAF domain-like AL549_RS07920 190019de9425fa613d94680666853239 560 Gene3D G3DSA:3.30.450.40 223 370 2.0E-5 T 28-03-2018 IPR029016 GAF domain-like AL549_RS07920 190019de9425fa613d94680666853239 560 Pfam PF06580 Histidine kinase 367 444 1.9E-26 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AL549_RS07920 190019de9425fa613d94680666853239 560 Pfam PF07694 5TMR of 5TMR-LYT 26 194 8.9E-61 T 28-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 AL549_RS12720 b1ceaadf101a0e35f3272ea0d1b66e09 207 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 17 202 29.758 T 28-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AL549_RS12720 b1ceaadf101a0e35f3272ea0d1b66e09 207 Pfam PF12804 MobA-like NTP transferase domain 22 170 1.6E-32 T 28-03-2018 IPR025877 MobA-like NTP transferase AL549_RS12720 b1ceaadf101a0e35f3272ea0d1b66e09 207 SUPERFAMILY SSF53448 20 200 1.55E-33 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS12720 b1ceaadf101a0e35f3272ea0d1b66e09 207 Gene3D G3DSA:3.90.550.10 19 205 3.2E-29 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS12720 b1ceaadf101a0e35f3272ea0d1b66e09 207 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 20 199 6.4E-74 T 28-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AL549_RS11125 0703606bf92ff97c6f2432467da209fe 357 Gene3D G3DSA:3.30.230.40 257 357 5.9E-32 T 28-03-2018 AL549_RS11125 0703606bf92ff97c6f2432467da209fe 357 SUPERFAMILY SSF54211 254 344 4.05E-31 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS11125 0703606bf92ff97c6f2432467da209fe 357 SUPERFAMILY SSF56784 3 158 1.6E-39 T 28-03-2018 IPR023214 HAD-like domain AL549_RS11125 0703606bf92ff97c6f2432467da209fe 357 Gene3D G3DSA:3.40.50.1000 2 167 3.3E-24 T 28-03-2018 IPR023214 HAD-like domain AL549_RS11125 0703606bf92ff97c6f2432467da209fe 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 2.6E-48 T 28-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AL549_RS11125 0703606bf92ff97c6f2432467da209fe 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 28-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL549_RS11125 0703606bf92ff97c6f2432467da209fe 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 37.587 T 28-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL549_RS11125 0703606bf92ff97c6f2432467da209fe 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 4.4E-28 T 28-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AL549_RS11125 0703606bf92ff97c6f2432467da209fe 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 133 5.6E-6 T 28-03-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 AL549_RS11125 0703606bf92ff97c6f2432467da209fe 357 SUPERFAMILY SSF54211 169 253 6.45E-32 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS11125 0703606bf92ff97c6f2432467da209fe 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 1.4E-65 T 28-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL549_RS11125 0703606bf92ff97c6f2432467da209fe 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 51.205 T 28-03-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 AL549_RS11125 0703606bf92ff97c6f2432467da209fe 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 28-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL549_RS11125 0703606bf92ff97c6f2432467da209fe 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 8.5E-80 T 28-03-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 AL549_RS11125 0703606bf92ff97c6f2432467da209fe 357 Gene3D G3DSA:3.30.230.40 169 255 7.7E-34 T 28-03-2018 AL549_RS08430 4c2f73f57841a8715daa3db3336fc62b 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 1.1E-52 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 AL549_RS08430 4c2f73f57841a8715daa3db3336fc62b 161 SUPERFAMILY SSF74982 9 139 7.85E-48 T 28-03-2018 IPR023620 Small protein B AL549_RS08430 4c2f73f57841a8715daa3db3336fc62b 161 Pfam PF01668 SmpB protein 15 157 8.1E-56 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 AL549_RS08430 4c2f73f57841a8715daa3db3336fc62b 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 5.0E-61 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 AL549_RS08430 4c2f73f57841a8715daa3db3336fc62b 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 69.318 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 AL549_RS08430 4c2f73f57841a8715daa3db3336fc62b 161 Gene3D G3DSA:2.40.280.10 15 134 8.0E-44 T 28-03-2018 IPR023620 Small protein B AL549_RS08430 4c2f73f57841a8715daa3db3336fc62b 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 28-03-2018 IPR020081 SsrA-binding protein, conserved site AL549_RS11530 4bcc7ccefffcc162671a7ebd234332b7 87 SUPERFAMILY SSF52833 3 81 3.94E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS11530 4bcc7ccefffcc162671a7ebd234332b7 87 Pfam PF00462 Glutaredoxin 3 69 3.6E-16 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL549_RS11530 4bcc7ccefffcc162671a7ebd234332b7 87 PRINTS PR00160 Glutaredoxin signature 52 65 5.2E-12 T 28-03-2018 IPR014025 Glutaredoxin subgroup AL549_RS11530 4bcc7ccefffcc162671a7ebd234332b7 87 PRINTS PR00160 Glutaredoxin signature 3 21 5.2E-12 T 28-03-2018 IPR014025 Glutaredoxin subgroup AL549_RS11530 4bcc7ccefffcc162671a7ebd234332b7 87 PRINTS PR00160 Glutaredoxin signature 66 79 5.2E-12 T 28-03-2018 IPR014025 Glutaredoxin subgroup AL549_RS11530 4bcc7ccefffcc162671a7ebd234332b7 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 5.3E-47 T 28-03-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 AL549_RS11530 4bcc7ccefffcc162671a7ebd234332b7 87 Gene3D G3DSA:3.40.30.10 2 80 1.8E-21 T 28-03-2018 AL549_RS16805 7970c942f0953e86727b04eef519cebc 262 Gene3D G3DSA:3.30.70.270 128 262 5.1E-26 T 28-03-2018 AL549_RS16805 7970c942f0953e86727b04eef519cebc 262 SMART SM00267 120 261 4.0E-19 T 28-03-2018 IPR000160 GGDEF domain AL549_RS16805 7970c942f0953e86727b04eef519cebc 262 SUPERFAMILY SSF55073 136 262 3.3E-26 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS16805 7970c942f0953e86727b04eef519cebc 262 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 132 262 3.8E-20 T 28-03-2018 IPR000160 GGDEF domain AL549_RS16805 7970c942f0953e86727b04eef519cebc 262 Pfam PF00990 Diguanylate cyclase, GGDEF domain 132 262 9.0E-21 T 28-03-2018 IPR000160 GGDEF domain AL549_RS17500 d0b6675b9eb387d7bd8ec0b1354ad371 487 Gene3D G3DSA:1.10.10.60 377 486 4.1E-16 T 28-03-2018 AL549_RS17500 d0b6675b9eb387d7bd8ec0b1354ad371 487 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL549_RS17500 d0b6675b9eb387d7bd8ec0b1354ad371 487 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL549_RS17500 d0b6675b9eb387d7bd8ec0b1354ad371 487 Gene3D G3DSA:3.40.50.300 129 307 2.2E-28 T 28-03-2018 AL549_RS17500 d0b6675b9eb387d7bd8ec0b1354ad371 487 Pfam PF02954 Bacterial regulatory protein, Fis family 443 483 2.4E-14 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS17500 d0b6675b9eb387d7bd8ec0b1354ad371 487 SUPERFAMILY SSF52540 136 377 7.29E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS17500 d0b6675b9eb387d7bd8ec0b1354ad371 487 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 466 486 2.5E-10 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS17500 d0b6675b9eb387d7bd8ec0b1354ad371 487 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 466 2.5E-10 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS17500 d0b6675b9eb387d7bd8ec0b1354ad371 487 SUPERFAMILY SSF52172 6 178 2.57E-5 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS17500 d0b6675b9eb387d7bd8ec0b1354ad371 487 SUPERFAMILY SSF46689 433 485 3.44E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS17500 d0b6675b9eb387d7bd8ec0b1354ad371 487 SUPERFAMILY SSF46689 348 391 3.44E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS17500 d0b6675b9eb387d7bd8ec0b1354ad371 487 SMART SM00382 156 300 1.6E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS17500 d0b6675b9eb387d7bd8ec0b1354ad371 487 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 348 357 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL549_RS17500 d0b6675b9eb387d7bd8ec0b1354ad371 487 Pfam PF00158 Sigma-54 interaction domain 136 303 1.7E-73 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL549_RS17500 d0b6675b9eb387d7bd8ec0b1354ad371 487 Pfam PF06490 Flagellar regulatory protein FleQ 6 114 4.0E-29 T 28-03-2018 IPR010518 Flagellar regulatory FleQ AL549_RS17500 d0b6675b9eb387d7bd8ec0b1354ad371 487 Gene3D G3DSA:1.10.8.60 308 376 5.0E-22 T 28-03-2018 AL549_RS04740 0d24696487fe43e8fa3ecbbf5fb8300f 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 1.5E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS04740 0d24696487fe43e8fa3ecbbf5fb8300f 202 SUPERFAMILY SSF46894 125 198 5.44E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS04740 0d24696487fe43e8fa3ecbbf5fb8300f 202 SUPERFAMILY SSF52172 1 125 1.24E-25 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS04740 0d24696487fe43e8fa3ecbbf5fb8300f 202 Gene3D G3DSA:1.10.10.10 124 202 3.4E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS04740 0d24696487fe43e8fa3ecbbf5fb8300f 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS04740 0d24696487fe43e8fa3ecbbf5fb8300f 202 Pfam PF00072 Response regulator receiver domain 4 113 6.4E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS04740 0d24696487fe43e8fa3ecbbf5fb8300f 202 SMART SM00448 2 112 3.3E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS04740 0d24696487fe43e8fa3ecbbf5fb8300f 202 SMART SM00421 140 197 6.9E-21 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS04740 0d24696487fe43e8fa3ecbbf5fb8300f 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 1.3E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS04740 0d24696487fe43e8fa3ecbbf5fb8300f 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 1.3E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS04740 0d24696487fe43e8fa3ecbbf5fb8300f 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 1.3E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS04740 0d24696487fe43e8fa3ecbbf5fb8300f 202 Gene3D G3DSA:3.40.50.2300 1 123 4.8E-24 T 28-03-2018 AL549_RS19770 4eb9e67d5037f0fc6054df2a45a62157 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.4E-63 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL549_RS19770 4eb9e67d5037f0fc6054df2a45a62157 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.4E-63 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL549_RS19770 4eb9e67d5037f0fc6054df2a45a62157 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.4E-63 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL549_RS19770 4eb9e67d5037f0fc6054df2a45a62157 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.4E-63 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL549_RS19770 4eb9e67d5037f0fc6054df2a45a62157 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.4E-63 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL549_RS19770 4eb9e67d5037f0fc6054df2a45a62157 347 Gene3D G3DSA:3.30.420.40 164 198 4.3E-4 T 28-03-2018 AL549_RS19770 4eb9e67d5037f0fc6054df2a45a62157 347 Gene3D G3DSA:3.30.420.40 257 321 8.0E-9 T 28-03-2018 AL549_RS19770 4eb9e67d5037f0fc6054df2a45a62157 347 Pfam PF06723 MreB/Mbl protein 11 338 1.6E-149 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL549_RS19770 4eb9e67d5037f0fc6054df2a45a62157 347 SUPERFAMILY SSF53067 154 340 4.66E-51 T 28-03-2018 AL549_RS19770 4eb9e67d5037f0fc6054df2a45a62157 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 2.8E-166 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL549_RS19770 4eb9e67d5037f0fc6054df2a45a62157 347 SUPERFAMILY SSF53067 9 152 2.71E-37 T 28-03-2018 AL549_RS19770 4eb9e67d5037f0fc6054df2a45a62157 347 Gene3D G3DSA:3.90.640.10 199 256 4.3E-28 T 28-03-2018 AL549_RS19770 4eb9e67d5037f0fc6054df2a45a62157 347 Gene3D G3DSA:3.30.420.40 8 163 3.6E-43 T 28-03-2018 AL549_RS07100 b42155e962486e76e4ca20c10e69c806 308 SUPERFAMILY SSF46689 259 307 1.08E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS07100 b42155e962486e76e4ca20c10e69c806 308 Gene3D G3DSA:1.10.10.60 185 262 7.2E-9 T 28-03-2018 AL549_RS07100 b42155e962486e76e4ca20c10e69c806 308 SUPERFAMILY SSF46689 206 256 1.34E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS07100 b42155e962486e76e4ca20c10e69c806 308 Gene3D G3DSA:2.60.120.280 13 184 9.1E-13 T 28-03-2018 AL549_RS07100 b42155e962486e76e4ca20c10e69c806 308 SMART SM00342 223 305 2.0E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS07100 b42155e962486e76e4ca20c10e69c806 308 Pfam PF12833 Helix-turn-helix domain 229 306 2.0E-16 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS07100 b42155e962486e76e4ca20c10e69c806 308 Gene3D G3DSA:1.10.10.60 265 308 8.3E-8 T 28-03-2018 AL549_RS07100 b42155e962486e76e4ca20c10e69c806 308 Pfam PF12852 Cupin 21 191 3.2E-36 T 28-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AL549_RS11165 84dcdbe82852e26ee97659fd430753fe 164 SUPERFAMILY SSF50891 1 162 2.05E-59 T 28-03-2018 IPR029000 Cyclophilin-like domain AL549_RS11165 84dcdbe82852e26ee97659fd430753fe 164 PIRSF PIRSF001467 1 163 2.8E-28 T 28-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AL549_RS11165 84dcdbe82852e26ee97659fd430753fe 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 3.0E-12 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL549_RS11165 84dcdbe82852e26ee97659fd430753fe 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 3.0E-12 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL549_RS11165 84dcdbe82852e26ee97659fd430753fe 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 3.0E-12 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL549_RS11165 84dcdbe82852e26ee97659fd430753fe 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 9.6E-49 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL549_RS11165 84dcdbe82852e26ee97659fd430753fe 164 Gene3D G3DSA:2.40.100.10 1 164 1.4E-50 T 28-03-2018 IPR029000 Cyclophilin-like domain AL549_RS11165 84dcdbe82852e26ee97659fd430753fe 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 28-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AL549_RS07690 2111314310142773c0fe5a80a9d71e78 238 SMART SM00862 156 232 1.4E-13 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS07690 2111314310142773c0fe5a80a9d71e78 238 SUPERFAMILY SSF46894 137 233 1.81E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS07690 2111314310142773c0fe5a80a9d71e78 238 SUPERFAMILY SSF52172 2 123 1.71E-35 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS07690 2111314310142773c0fe5a80a9d71e78 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 232 4.1E-17 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS07690 2111314310142773c0fe5a80a9d71e78 238 Gene3D G3DSA:1.10.10.10 132 236 2.4E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS07690 2111314310142773c0fe5a80a9d71e78 238 Pfam PF00072 Response regulator receiver domain 6 113 2.7E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS07690 2111314310142773c0fe5a80a9d71e78 238 Gene3D G3DSA:3.40.50.2300 1 131 5.2E-32 T 28-03-2018 AL549_RS07690 2111314310142773c0fe5a80a9d71e78 238 SMART SM00448 4 114 2.0E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS08890 1b4387809f09446a7d4ab5626f35e444 406 Gene3D G3DSA:3.50.50.60 24 336 7.7E-43 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS08890 1b4387809f09446a7d4ab5626f35e444 406 SUPERFAMILY SSF51905 288 399 7.89E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS08890 1b4387809f09446a7d4ab5626f35e444 406 SUPERFAMILY SSF51905 27 199 7.89E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS08890 1b4387809f09446a7d4ab5626f35e444 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 178 193 1.2E-18 T 28-03-2018 AL549_RS08890 1b4387809f09446a7d4ab5626f35e444 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 316 332 1.2E-18 T 28-03-2018 AL549_RS08890 1b4387809f09446a7d4ab5626f35e444 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 29 51 1.2E-18 T 28-03-2018 AL549_RS08890 1b4387809f09446a7d4ab5626f35e444 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 316 1.2E-18 T 28-03-2018 AL549_RS08890 1b4387809f09446a7d4ab5626f35e444 406 Pfam PF01494 FAD binding domain 175 333 4.8E-20 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL549_RS08890 1b4387809f09446a7d4ab5626f35e444 406 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 29 405 7.6E-112 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AL549_RS06810 7e8be6838aa0171f2a4b188cd2fb5d81 343 Gene3D G3DSA:3.30.830.10 155 327 6.0E-8 T 28-03-2018 AL549_RS08300 6f92973335b98413415c576caaff7ea2 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 382 1.7E-140 T 28-03-2018 IPR017687 Outer membrane protein assembly factor BamB AL549_RS08300 6f92973335b98413415c576caaff7ea2 386 SMART SM00564 107 138 0.011 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL549_RS08300 6f92973335b98413415c576caaff7ea2 386 SMART SM00564 322 353 1.2 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL549_RS08300 6f92973335b98413415c576caaff7ea2 386 SMART SM00564 192 223 130.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL549_RS08300 6f92973335b98413415c576caaff7ea2 386 SMART SM00564 243 274 0.022 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL549_RS08300 6f92973335b98413415c576caaff7ea2 386 SMART SM00564 63 94 0.004 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL549_RS08300 6f92973335b98413415c576caaff7ea2 386 SMART SM00564 146 178 5.2E-4 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL549_RS08300 6f92973335b98413415c576caaff7ea2 386 SMART SM00564 280 312 27.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL549_RS08300 6f92973335b98413415c576caaff7ea2 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 40.792 T 28-03-2018 IPR017687 Outer membrane protein assembly factor BamB AL549_RS08300 6f92973335b98413415c576caaff7ea2 386 Gene3D G3DSA:2.140.10.10 29 184 1.1E-29 T 28-03-2018 AL549_RS08300 6f92973335b98413415c576caaff7ea2 386 Gene3D G3DSA:2.140.10.10 185 224 0.013 T 28-03-2018 AL549_RS08300 6f92973335b98413415c576caaff7ea2 386 SUPERFAMILY SSF50998 31 376 7.33E-82 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AL549_RS08300 6f92973335b98413415c576caaff7ea2 386 Pfam PF13360 PQQ-like domain 76 311 2.7E-53 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AL549_RS08300 6f92973335b98413415c576caaff7ea2 386 Gene3D G3DSA:2.140.10.10 225 383 3.6E-26 T 28-03-2018 AL549_RS22460 7087796ae5f5ea13fd07c6eb2a269c5a 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 539 54.967 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL549_RS22460 7087796ae5f5ea13fd07c6eb2a269c5a 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 7.2E-212 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL549_RS22460 7087796ae5f5ea13fd07c6eb2a269c5a 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 11 541 1.1E-274 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL549_RS22460 7087796ae5f5ea13fd07c6eb2a269c5a 542 Gene3D G3DSA:3.90.228.20 310 539 3.7E-92 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AL549_RS22460 7087796ae5f5ea13fd07c6eb2a269c5a 542 Gene3D G3DSA:3.90.228.20 229 309 2.0E-28 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AL549_RS22460 7087796ae5f5ea13fd07c6eb2a269c5a 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 28-03-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL549_RS22460 7087796ae5f5ea13fd07c6eb2a269c5a 542 Gene3D G3DSA:3.40.449.10 25 228 2.6E-77 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AL549_RS22460 7087796ae5f5ea13fd07c6eb2a269c5a 542 SUPERFAMILY SSF53795 230 541 3.14E-127 T 28-03-2018 AL549_RS22460 7087796ae5f5ea13fd07c6eb2a269c5a 542 PIRSF PIRSF006294 4 541 7.3E-228 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL549_RS22460 7087796ae5f5ea13fd07c6eb2a269c5a 542 SUPERFAMILY SSF68923 11 228 4.19E-87 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AL549_RS04965 c58092c451d2c2bbd3af1b483c88c56e 216 PIRSF PIRSF006320 1 216 5.5E-106 T 28-03-2018 IPR026041 Glyoxalase ElbB AL549_RS04965 c58092c451d2c2bbd3af1b483c88c56e 216 Gene3D G3DSA:3.40.50.880 2 216 8.4E-35 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS04965 c58092c451d2c2bbd3af1b483c88c56e 216 SUPERFAMILY SSF52317 1 215 3.64E-60 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS02770 797095b17425d24e80bfc7dbe66ee733 204 Pfam PF01389 OmpA-like transmembrane domain 21 204 2.3E-17 T 28-03-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AL549_RS02770 797095b17425d24e80bfc7dbe66ee733 204 Gene3D G3DSA:2.40.160.20 5 204 3.0E-21 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS02770 797095b17425d24e80bfc7dbe66ee733 204 SUPERFAMILY SSF56925 20 204 1.18E-23 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS11790 5c412869777cd5054982efab0a7798f7 368 Pfam PF01546 Peptidase family M20/M25/M40 72 367 2.7E-20 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL549_RS11790 5c412869777cd5054982efab0a7798f7 368 PIRSF PIRSF001123 80 180 3.8E-4 T 28-03-2018 IPR008007 Peptidase M42 AL549_RS11790 5c412869777cd5054982efab0a7798f7 368 PIRSF PIRSF001123 293 368 0.0015 T 28-03-2018 IPR008007 Peptidase M42 AL549_RS11790 5c412869777cd5054982efab0a7798f7 368 PIRSF PIRSF001123 6 105 2.1 T 28-03-2018 IPR008007 Peptidase M42 AL549_RS11790 5c412869777cd5054982efab0a7798f7 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 365 2.1E-158 T 28-03-2018 IPR010162 Peptidase M20B, peptidase T-like AL549_RS11790 5c412869777cd5054982efab0a7798f7 368 Gene3D G3DSA:3.40.630.10 1 368 3.2E-61 T 28-03-2018 AL549_RS11790 5c412869777cd5054982efab0a7798f7 368 SUPERFAMILY SSF55031 177 289 7.33E-22 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL549_RS11790 5c412869777cd5054982efab0a7798f7 368 SUPERFAMILY SSF53187 7 177 2.77E-59 T 28-03-2018 AL549_RS11790 5c412869777cd5054982efab0a7798f7 368 SUPERFAMILY SSF53187 287 367 2.77E-59 T 28-03-2018 AL549_RS11790 5c412869777cd5054982efab0a7798f7 368 Pfam PF07687 Peptidase dimerisation domain 182 273 6.8E-15 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL549_RS17370 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 Pfam PF13614 AAA domain 4 177 8.1E-50 T 28-03-2018 IPR025669 AAA domain AL549_RS17370 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 Gene3D G3DSA:3.40.50.300 3 256 5.1E-50 T 28-03-2018 AL549_RS17370 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 PIRSF PIRSF009320 96 239 1.6E-7 T 28-03-2018 AL549_RS17370 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 PIRSF PIRSF009320 1 81 1.8E-13 T 28-03-2018 AL549_RS17370 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 SUPERFAMILY SSF52540 1 252 6.69E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06005 bbb296d740f8d59a04f863c24223a9df 1060 SMART SM00495 1012 1057 0.014 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS06005 bbb296d740f8d59a04f863c24223a9df 1060 SMART SM00495 37 83 7.0E-16 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS06005 bbb296d740f8d59a04f863c24223a9df 1060 Gene3D G3DSA:3.20.20.80 246 815 2.2E-87 T 28-03-2018 AL549_RS06005 bbb296d740f8d59a04f863c24223a9df 1060 Pfam PF00704 Glycosyl hydrolases family 18 322 781 2.5E-85 T 28-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AL549_RS06005 bbb296d740f8d59a04f863c24223a9df 1060 ProSitePatterns PS01095 Chitinases family 18 active site. 470 478 - T 28-03-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL549_RS06005 bbb296d740f8d59a04f863c24223a9df 1060 Gene3D G3DSA:2.10.10.20 1003 1056 0.15 T 28-03-2018 AL549_RS06005 bbb296d740f8d59a04f863c24223a9df 1060 Gene3D G3DSA:2.40.50.70 155 229 2.3E-11 T 28-03-2018 AL549_RS06005 bbb296d740f8d59a04f863c24223a9df 1060 Gene3D G3DSA:2.40.50.70 88 135 3.2E-11 T 28-03-2018 AL549_RS06005 bbb296d740f8d59a04f863c24223a9df 1060 SUPERFAMILY SSF51445 315 628 2.46E-75 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS06005 bbb296d740f8d59a04f863c24223a9df 1060 SUPERFAMILY SSF51445 753 785 2.46E-75 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS06005 bbb296d740f8d59a04f863c24223a9df 1060 Pfam PF06483 Chitinase C 809 974 3.5E-71 T 28-03-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL549_RS06005 bbb296d740f8d59a04f863c24223a9df 1060 SUPERFAMILY SSF51055 22 87 1.1E-17 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS06005 bbb296d740f8d59a04f863c24223a9df 1060 SMART SM00636 321 781 8.3E-121 T 28-03-2018 IPR011583 Chitinase II GO:0008061 AL549_RS06005 bbb296d740f8d59a04f863c24223a9df 1060 Gene3D G3DSA:2.10.10.20 22 87 2.3E-16 T 28-03-2018 AL549_RS06005 bbb296d740f8d59a04f863c24223a9df 1060 SUPERFAMILY SSF54556 628 751 7.63E-14 T 28-03-2018 IPR029070 Chitinase insertion domain AL549_RS18450 337d08c2da74eded5b63ac7125e6bcc7 258 SUPERFAMILY SSF51569 6 245 3.77E-82 T 28-03-2018 AL549_RS18450 337d08c2da74eded5b63ac7125e6bcc7 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 52.72 T 28-03-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 AL549_RS18450 337d08c2da74eded5b63ac7125e6bcc7 258 PIRSF PIRSF001357 5 252 6.8E-77 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL549_RS18450 337d08c2da74eded5b63ac7125e6bcc7 258 SMART SM01133 10 244 2.2E-79 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL549_RS18450 337d08c2da74eded5b63ac7125e6bcc7 258 Gene3D G3DSA:3.20.20.70 1 256 1.0E-82 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS18450 337d08c2da74eded5b63ac7125e6bcc7 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 8.1E-82 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL549_RS18450 337d08c2da74eded5b63ac7125e6bcc7 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 9.1E-49 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL549_RS10735 e704770c5e2eff0ecc56a5d52bbadc14 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 6 337 3.1E-99 T 28-03-2018 IPR003770 Endolytic murein transglycosylase AL549_RS10735 e704770c5e2eff0ecc56a5d52bbadc14 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 6 334 32.767 T 28-03-2018 IPR003770 Endolytic murein transglycosylase AL549_RS10735 e704770c5e2eff0ecc56a5d52bbadc14 338 Gene3D G3DSA:3.30.160.60 304 338 5.5E-17 T 28-03-2018 AL549_RS10735 e704770c5e2eff0ecc56a5d52bbadc14 338 Gene3D G3DSA:3.30.160.60 76 110 4.1E-9 T 28-03-2018 AL549_RS10735 e704770c5e2eff0ecc56a5d52bbadc14 338 Pfam PF02618 YceG-like family 43 329 2.4E-81 T 28-03-2018 IPR003770 Endolytic murein transglycosylase AL549_RS23600 58dbe40fa6b47e05132390a4dd20afa7 776 Pfam PF04453 Organic solvent tolerance protein 295 677 2.7E-111 T 28-03-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AL549_RS23600 58dbe40fa6b47e05132390a4dd20afa7 776 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 9 748 20.382 T 28-03-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AL549_RS23600 58dbe40fa6b47e05132390a4dd20afa7 776 Gene3D G3DSA:2.60.450.10 45 199 4.0E-20 T 28-03-2018 AL549_RS23600 58dbe40fa6b47e05132390a4dd20afa7 776 Pfam PF03968 OstA-like protein 56 187 6.3E-21 T 28-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal AL549_RS10225 05ffbd85142505ae298bbf93555ef2f0 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.4E-21 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS10225 05ffbd85142505ae298bbf93555ef2f0 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.4E-21 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS10225 05ffbd85142505ae298bbf93555ef2f0 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.4E-21 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS10225 05ffbd85142505ae298bbf93555ef2f0 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.4E-21 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS10225 05ffbd85142505ae298bbf93555ef2f0 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.4E-21 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS10225 05ffbd85142505ae298bbf93555ef2f0 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 1.3E-34 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS10225 05ffbd85142505ae298bbf93555ef2f0 194 PIRSF PIRSF000349 1 194 8.7E-84 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS10225 05ffbd85142505ae298bbf93555ef2f0 194 Gene3D G3DSA:1.10.287.990 20 82 4.3E-26 T 28-03-2018 AL549_RS10225 05ffbd85142505ae298bbf93555ef2f0 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 5.9E-38 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS10225 05ffbd85142505ae298bbf93555ef2f0 194 SUPERFAMILY SSF54719 84 193 7.2E-43 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS10225 05ffbd85142505ae298bbf93555ef2f0 194 SUPERFAMILY SSF46609 1 84 2.75E-35 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS10225 05ffbd85142505ae298bbf93555ef2f0 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 28-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS04415 f8f0598defb1f435224d33962d1353f4 325 SUPERFAMILY SSF56935 22 325 2.32E-48 T 28-03-2018 AL549_RS04415 f8f0598defb1f435224d33962d1353f4 325 Gene3D G3DSA:2.40.160.10 6 325 6.1E-40 T 28-03-2018 AL549_RS04415 f8f0598defb1f435224d33962d1353f4 325 Pfam PF13609 Gram-negative porin 7 301 1.9E-28 T 28-03-2018 AL549_RS18645 129f6616a1e36cfadd98ae0522b67a80 138 Pfam PF04304 Protein of unknown function (DUF454) 17 129 7.9E-33 T 28-03-2018 IPR007401 Protein of unknown function DUF454 AL549_RS18645 129f6616a1e36cfadd98ae0522b67a80 138 PIRSF PIRSF016789 13 135 1.2E-31 T 28-03-2018 IPR007401 Protein of unknown function DUF454 AL549_RS04210 1ea0d3f315e61de9abe9cc70c516b191 307 Gene3D G3DSA:1.20.5.1230 2 93 1.6E-4 T 28-03-2018 AL549_RS11015 fc8a0e508311f90f55769df6a3b07fb3 269 Gene3D G3DSA:3.40.50.150 9 259 3.9E-39 T 28-03-2018 AL549_RS11015 fc8a0e508311f90f55769df6a3b07fb3 269 Pfam PF08241 Methyltransferase domain 59 152 2.5E-27 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AL549_RS11015 fc8a0e508311f90f55769df6a3b07fb3 269 SUPERFAMILY SSF53335 21 200 3.04E-45 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS11015 fc8a0e508311f90f55769df6a3b07fb3 269 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 23 268 2.7E-68 T 28-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 AL549_RS11015 fc8a0e508311f90f55769df6a3b07fb3 269 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 15 269 32.686 T 28-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 AL549_RS21905 29fa71e186f41533e511ad7b8c08640d 324 Gene3D G3DSA:2.40.160.20 164 324 4.6E-4 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS21905 29fa71e186f41533e511ad7b8c08640d 324 Pfam PF11059 Protein of unknown function (DUF2860) 32 323 5.0E-113 T 28-03-2018 IPR016896 Protein of unknown function DUF2860 AL549_RS21905 29fa71e186f41533e511ad7b8c08640d 324 PIRSF PIRSF028696 1 324 5.4E-130 T 28-03-2018 IPR016896 Protein of unknown function DUF2860 AL549_RS18455 118b28dab1ed18dc6be54d7411882b28 420 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 8.7E-26 T 28-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AL549_RS18455 118b28dab1ed18dc6be54d7411882b28 420 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 197 417 8.7E-71 T 28-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AL549_RS18455 118b28dab1ed18dc6be54d7411882b28 420 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 417 7.9E-150 T 28-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AL549_RS18455 118b28dab1ed18dc6be54d7411882b28 420 Pfam PF07670 Nucleoside recognition 95 191 3.1E-7 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL549_RS19685 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 PIRSF PIRSF018193 8 140 4.2E-59 T 28-03-2018 IPR016716 Regulator of ribonuclease activity B AL549_RS19685 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 Pfam PF06877 Regulator of ribonuclease activity B 18 120 3.2E-34 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain AL549_RS19685 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 Gene3D G3DSA:3.30.70.970 10 123 3.3E-44 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain AL549_RS19685 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 SUPERFAMILY SSF89946 8 126 4.97E-39 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain AL549_RS19685 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 29.753 T 28-03-2018 IPR016716 Regulator of ribonuclease activity B AL549_RS07890 99fa8cdfd675ec384f7b512091c2071d 311 SMART SM00904 183 307 5.5E-63 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AL549_RS07890 99fa8cdfd675ec384f7b512091c2071d 311 Gene3D G3DSA:2.40.30.30 180 310 7.0E-41 T 28-03-2018 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 AL549_RS07890 99fa8cdfd675ec384f7b512091c2071d 311 Pfam PF01687 Riboflavin kinase 184 306 4.0E-38 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AL549_RS07890 99fa8cdfd675ec384f7b512091c2071d 311 Gene3D G3DSA:3.40.50.620 1 179 1.5E-47 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS07890 99fa8cdfd675ec384f7b512091c2071d 311 SUPERFAMILY SSF52374 15 175 3.75E-33 T 28-03-2018 AL549_RS07890 99fa8cdfd675ec384f7b512091c2071d 311 Pfam PF06574 FAD synthetase 12 167 3.0E-57 T 28-03-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AL549_RS07890 99fa8cdfd675ec384f7b512091c2071d 311 PIRSF PIRSF004491 1 311 3.0E-106 T 28-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AL549_RS07890 99fa8cdfd675ec384f7b512091c2071d 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 2.3E-108 T 28-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AL549_RS07890 99fa8cdfd675ec384f7b512091c2071d 311 SUPERFAMILY SSF82114 174 309 1.92E-45 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AL549_RS06155 77c733d4cce4f0f66f163fccc2d99b2c 586 Gene3D G3DSA:1.20.1560.10 6 333 1.0E-67 T 28-03-2018 AL549_RS06155 77c733d4cce4f0f66f163fccc2d99b2c 586 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 7 582 4.4E-289 T 28-03-2018 IPR011918 ABC transporter, ATP-binding/permease protein AL549_RS06155 77c733d4cce4f0f66f163fccc2d99b2c 586 Gene3D G3DSA:3.40.50.300 341 578 6.5E-77 T 28-03-2018 AL549_RS06155 77c733d4cce4f0f66f163fccc2d99b2c 586 Pfam PF00664 ABC transporter transmembrane region 29 291 1.5E-49 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS06155 77c733d4cce4f0f66f163fccc2d99b2c 586 SMART SM00382 371 572 7.1E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS06155 77c733d4cce4f0f66f163fccc2d99b2c 586 Pfam PF00005 ABC transporter 363 511 6.6E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS06155 77c733d4cce4f0f66f163fccc2d99b2c 586 SUPERFAMILY SSF52540 336 582 5.62E-93 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06155 77c733d4cce4f0f66f163fccc2d99b2c 586 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS06155 77c733d4cce4f0f66f163fccc2d99b2c 586 SUPERFAMILY SSF90123 15 326 9.42E-75 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS20005 891771c5b5551c147d3e0cd9903e7ff7 326 Pfam PF01207 Dihydrouridine synthase (Dus) 9 316 5.6E-95 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL549_RS20005 891771c5b5551c147d3e0cd9903e7ff7 326 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 322 53.63 T 28-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AL549_RS20005 891771c5b5551c147d3e0cd9903e7ff7 326 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 320 1.1E-162 T 28-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AL549_RS20005 891771c5b5551c147d3e0cd9903e7ff7 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 87 105 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL549_RS20005 891771c5b5551c147d3e0cd9903e7ff7 326 SUPERFAMILY SSF51395 6 319 8.06E-75 T 28-03-2018 AL549_RS20005 891771c5b5551c147d3e0cd9903e7ff7 326 Gene3D G3DSA:3.20.20.70 3 244 1.1E-41 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS20005 891771c5b5551c147d3e0cd9903e7ff7 326 PIRSF PIRSF006621 1 323 2.4E-76 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SUPERFAMILY SSF52540 6 288 1.97E-107 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Pfam PF14492 Elongation Factor G, domain II 409 483 2.4E-33 T 28-03-2018 AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Pfam PF03764 Elongation factor G, domain IV 484 603 1.6E-48 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SUPERFAMILY SSF54980 608 695 6.71E-30 T 28-03-2018 IPR035647 EF-G domain III/V-like AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 4.6E-18 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Gene3D G3DSA:3.30.230.10 497 613 1.9E-44 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 3.4E-67 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SUPERFAMILY SSF50447 271 409 5.08E-36 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SMART SM00838 605 693 1.5E-57 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Gene3D G3DSA:3.40.50.300 1 293 2.2E-62 T 28-03-2018 AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SUPERFAMILY SSF54980 407 485 8.99E-25 T 28-03-2018 IPR035647 EF-G domain III/V-like AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Gene3D G3DSA:3.30.70.870 406 496 1.5E-35 T 28-03-2018 AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Gene3D G3DSA:3.30.70.240 614 692 4.1E-32 T 28-03-2018 AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SMART SM00889 485 603 8.5E-76 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 8.0E-35 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Pfam PF00679 Elongation factor G C-terminus 605 691 5.8E-31 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SUPERFAMILY SSF54211 484 604 7.59E-47 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 111.388 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL549_RS20290 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Gene3D G3DSA:2.40.30.10 295 405 2.9E-31 T 28-03-2018 AL549_RS21555 9bd027032cf4638bb8c02f19ca8a0687 134 SUPERFAMILY SSF46626 57 131 1.13E-18 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS21555 9bd027032cf4638bb8c02f19ca8a0687 134 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 56 130 1.7E-14 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS21555 9bd027032cf4638bb8c02f19ca8a0687 134 Gene3D G3DSA:1.10.760.10 55 131 1.1E-8 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS21555 9bd027032cf4638bb8c02f19ca8a0687 134 PRINTS PR00607 Class IE cytochrome C signature 77 87 6.9E-15 T 28-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL549_RS21555 9bd027032cf4638bb8c02f19ca8a0687 134 PRINTS PR00607 Class IE cytochrome C signature 66 77 6.9E-15 T 28-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL549_RS21555 9bd027032cf4638bb8c02f19ca8a0687 134 PRINTS PR00607 Class IE cytochrome C signature 120 131 6.9E-15 T 28-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL549_RS21555 9bd027032cf4638bb8c02f19ca8a0687 134 PRINTS PR00607 Class IE cytochrome C signature 105 117 6.9E-15 T 28-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL549_RS22925 c38a4e7f4e6f2b21e5bfbddeb71efef8 243 Gene3D G3DSA:2.40.360.10 31 243 5.6E-57 T 28-03-2018 IPR023373 YmcC-like domain AL549_RS22925 c38a4e7f4e6f2b21e5bfbddeb71efef8 243 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 27 235 6.3E-62 T 28-03-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB AL549_RS22925 c38a4e7f4e6f2b21e5bfbddeb71efef8 243 SUPERFAMILY SSF159270 32 239 6.54E-57 T 28-03-2018 IPR023373 YmcC-like domain AL549_RS19975 d43b5922bcf1d80d4317376b9d9d0f9c 258 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 39.012 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AL549_RS19975 d43b5922bcf1d80d4317376b9d9d0f9c 258 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 54 224 3.0E-50 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AL549_RS19975 d43b5922bcf1d80d4317376b9d9d0f9c 258 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 26 247 3.1E-91 T 28-03-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 AL549_RS19975 d43b5922bcf1d80d4317376b9d9d0f9c 258 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 38 248 2.6E-85 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AL549_RS19975 d43b5922bcf1d80d4317376b9d9d0f9c 258 SUPERFAMILY SSF52402 26 213 1.8E-55 T 28-03-2018 AL549_RS19975 d43b5922bcf1d80d4317376b9d9d0f9c 258 PIRSF PIRSF000857 4 253 2.1E-57 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AL549_RS19975 d43b5922bcf1d80d4317376b9d9d0f9c 258 Gene3D G3DSA:3.40.50.620 12 256 2.4E-40 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS00475 5e35ef1a868b93ad704c28e3682f58c7 391 SMART SM00849 108 302 9.6E-19 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS00475 5e35ef1a868b93ad704c28e3682f58c7 391 Gene3D G3DSA:3.60.15.10 82 328 3.9E-29 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS00475 5e35ef1a868b93ad704c28e3682f58c7 391 SUPERFAMILY SSF56281 90 330 3.92E-39 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS00475 5e35ef1a868b93ad704c28e3682f58c7 391 Pfam PF00753 Metallo-beta-lactamase superfamily 109 283 1.1E-14 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS17930 133a27298b42e3acc1ede2f8c2ae121c 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 1.5E-7 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS17930 133a27298b42e3acc1ede2f8c2ae121c 41 SUPERFAMILY SSF57840 5 40 1.28E-13 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS17930 133a27298b42e3acc1ede2f8c2ae121c 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS17930 133a27298b42e3acc1ede2f8c2ae121c 41 Pfam PF00444 Ribosomal protein L36 1 40 1.2E-16 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS17930 133a27298b42e3acc1ede2f8c2ae121c 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 15.995 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS08575 79202ac11e3c0feaffcd04c755803f87 352 SUPERFAMILY SSF53187 20 318 4.3E-76 T 28-03-2018 AL549_RS08575 79202ac11e3c0feaffcd04c755803f87 352 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 317 7.6E-72 T 28-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL549_RS08575 79202ac11e3c0feaffcd04c755803f87 352 Gene3D G3DSA:3.40.630.10 42 282 1.2E-28 T 28-03-2018 AL549_RS08575 79202ac11e3c0feaffcd04c755803f87 352 PIRSF PIRSF039012 4 325 1.3E-90 T 28-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL549_RS10785 9167504ac66489b1967b04342096f532 392 Pfam PF01734 Patatin-like phospholipase 30 197 1.7E-19 T 28-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AL549_RS10785 9167504ac66489b1967b04342096f532 392 SUPERFAMILY SSF52151 25 298 2.88E-35 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL549_RS10785 9167504ac66489b1967b04342096f532 392 Gene3D G3DSA:3.40.1090.10 14 311 9.2E-23 T 28-03-2018 AL549_RS11290 7f457103f3da138b94c4e984130643b0 320 Gene3D G3DSA:1.10.3720.10 4 302 4.7E-37 T 28-03-2018 AL549_RS11290 7f457103f3da138b94c4e984130643b0 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 2.3E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS11290 7f457103f3da138b94c4e984130643b0 320 SUPERFAMILY SSF161098 69 137 3.76E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS11290 7f457103f3da138b94c4e984130643b0 320 SUPERFAMILY SSF161098 177 298 3.76E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS13205 17786856fc3e8a972702e5aa7f036222 268 SMART SM01040 14 116 0.0011 T 28-03-2018 IPR003497 BRO N-terminal domain AL549_RS13205 17786856fc3e8a972702e5aa7f036222 268 Pfam PF02498 BRO family, N-terminal domain 15 116 7.0E-8 T 28-03-2018 IPR003497 BRO N-terminal domain AL549_RS12450 19c7678048ed505b437e504a8907d8b4 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.736 T 28-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL549_RS12450 19c7678048ed505b437e504a8907d8b4 172 Gene3D G3DSA:3.10.129.10 1 172 8.3E-49 T 28-03-2018 AL549_RS12450 19c7678048ed505b437e504a8907d8b4 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 2.2E-93 T 28-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL549_RS12450 19c7678048ed505b437e504a8907d8b4 172 SUPERFAMILY SSF54637 4 169 1.31E-56 T 28-03-2018 IPR029069 HotDog domain AL549_RS12450 19c7678048ed505b437e504a8907d8b4 172 Pfam PF07977 FabA-like domain 29 158 2.8E-54 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL549_RS10105 30e3f065f4ab7906fe952c379ef45aba 667 SUPERFAMILY SSF51971 332 516 6.59E-39 T 28-03-2018 AL549_RS10105 30e3f065f4ab7906fe952c379ef45aba 667 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 374 626 1.2E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS10105 30e3f065f4ab7906fe952c379ef45aba 667 Gene3D G3DSA:3.40.50.720 363 475 5.8E-22 T 28-03-2018 AL549_RS10105 30e3f065f4ab7906fe952c379ef45aba 667 SUPERFAMILY SSF51905 523 643 1.3E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS10105 30e3f065f4ab7906fe952c379ef45aba 667 SUPERFAMILY SSF51905 370 423 1.3E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS10105 30e3f065f4ab7906fe952c379ef45aba 667 Gene3D G3DSA:3.50.50.60 476 620 3.4E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS10105 30e3f065f4ab7906fe952c379ef45aba 667 SUPERFAMILY SSF51395 2 362 2.48E-107 T 28-03-2018 AL549_RS10105 30e3f065f4ab7906fe952c379ef45aba 667 Gene3D G3DSA:3.20.20.70 1 362 2.8E-107 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS10105 30e3f065f4ab7906fe952c379ef45aba 667 PRINTS PR00419 Adrenodoxin reductase family signature 375 397 2.1E-8 T 28-03-2018 AL549_RS10105 30e3f065f4ab7906fe952c379ef45aba 667 PRINTS PR00419 Adrenodoxin reductase family signature 398 411 2.1E-8 T 28-03-2018 AL549_RS10105 30e3f065f4ab7906fe952c379ef45aba 667 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 327 7.0E-82 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AL549_RS07220 a9c3dd5308733484d81acb0616fda4d1 429 SUPERFAMILY SSF51261 145 392 9.94E-68 T 28-03-2018 IPR011055 Duplicated hybrid motif AL549_RS07220 a9c3dd5308733484d81acb0616fda4d1 429 Pfam PF01551 Peptidase family M23 296 390 1.1E-30 T 28-03-2018 IPR016047 Peptidase M23 AL549_RS07220 a9c3dd5308733484d81acb0616fda4d1 429 Gene3D G3DSA:2.70.70.10 263 429 7.0E-42 T 28-03-2018 AL549_RS07220 a9c3dd5308733484d81acb0616fda4d1 429 Pfam PF04225 Opacity-associated protein A LysM-like domain 74 156 6.6E-8 T 28-03-2018 IPR007340 Opacity-associated protein A AL549_RS16850 f5dd804fb0e1e68b653f3a0d16b7f4f4 401 Pfam PF02687 FtsX-like permease family 295 394 8.4E-12 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL549_RS16850 f5dd804fb0e1e68b653f3a0d16b7f4f4 401 Pfam PF12704 MacB-like periplasmic core domain 29 202 4.6E-12 T 28-03-2018 IPR025857 MacB-like periplasmic core domain AL549_RS16850 f5dd804fb0e1e68b653f3a0d16b7f4f4 401 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 401 4.0E-130 T 28-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AL549_RS18425 360cf7574e58690a805d8bf1d5cfe3a0 326 Gene3D G3DSA:3.40.50.1000 165 310 1.7E-23 T 28-03-2018 IPR023214 HAD-like domain AL549_RS18425 360cf7574e58690a805d8bf1d5cfe3a0 326 SUPERFAMILY SSF56784 104 311 1.49E-47 T 28-03-2018 IPR023214 HAD-like domain AL549_RS18425 360cf7574e58690a805d8bf1d5cfe3a0 326 Gene3D G3DSA:3.30.70.260 82 129 9.0E-5 T 28-03-2018 AL549_RS18425 360cf7574e58690a805d8bf1d5cfe3a0 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 102 310 9.6E-83 T 28-03-2018 AL549_RS18425 360cf7574e58690a805d8bf1d5cfe3a0 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 4.8E-24 T 28-03-2018 AL549_RS18425 360cf7574e58690a805d8bf1d5cfe3a0 326 Gene3D G3DSA:1.10.150.210 130 164 3.4E-25 T 28-03-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 AL549_RS18425 360cf7574e58690a805d8bf1d5cfe3a0 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 1.9E-11 T 28-03-2018 AL549_RS02070 977d19f1b82825e8d37b926b520ff2bf 807 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 457 472 4.5E-31 T 28-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL549_RS02070 977d19f1b82825e8d37b926b520ff2bf 807 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 391 407 4.5E-31 T 28-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL549_RS02070 977d19f1b82825e8d37b926b520ff2bf 807 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 433 451 4.5E-31 T 28-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL549_RS02070 977d19f1b82825e8d37b926b520ff2bf 807 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 373 387 4.5E-31 T 28-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL549_RS02070 977d19f1b82825e8d37b926b520ff2bf 807 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 97 115 4.5E-31 T 28-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL549_RS02070 977d19f1b82825e8d37b926b520ff2bf 807 Pfam PF08453 Peptidase family M9 N-terminal 31 211 5.3E-54 T 28-03-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain AL549_RS02070 977d19f1b82825e8d37b926b520ff2bf 807 Pfam PF01752 Collagenase 273 557 1.2E-110 T 28-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL549_RS02070 977d19f1b82825e8d37b926b520ff2bf 807 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 601 672 2.9E-9 T 28-03-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial AL549_RS03060 e6fc2aa35e0c4b5308d0ed5c2016ec7d 607 SUPERFAMILY SSF158472 381 429 8.37E-5 T 28-03-2018 AL549_RS03060 e6fc2aa35e0c4b5308d0ed5c2016ec7d 607 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 436 594 4.5E-44 T 28-03-2018 IPR000160 GGDEF domain AL549_RS03060 e6fc2aa35e0c4b5308d0ed5c2016ec7d 607 Pfam PF00990 Diguanylate cyclase, GGDEF domain 439 592 1.3E-38 T 28-03-2018 IPR000160 GGDEF domain AL549_RS03060 e6fc2aa35e0c4b5308d0ed5c2016ec7d 607 SMART SM00267 428 596 2.1E-51 T 28-03-2018 IPR000160 GGDEF domain AL549_RS03060 e6fc2aa35e0c4b5308d0ed5c2016ec7d 607 Gene3D G3DSA:3.30.70.270 422 596 1.2E-45 T 28-03-2018 AL549_RS03060 e6fc2aa35e0c4b5308d0ed5c2016ec7d 607 SMART SM00304 381 433 0.001 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS03060 e6fc2aa35e0c4b5308d0ed5c2016ec7d 607 SUPERFAMILY SSF55073 444 594 4.79E-40 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS11975 6a9112f8d041b02db332e08957153c9b 380 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 380 8.6E-163 T 28-03-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 AL549_RS11975 6a9112f8d041b02db332e08957153c9b 380 SUPERFAMILY SSF48256 14 380 2.62E-125 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL549_RS11975 6a9112f8d041b02db332e08957153c9b 380 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 28-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AL549_RS11975 6a9112f8d041b02db332e08957153c9b 380 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 1.1E-113 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL549_RS11975 6a9112f8d041b02db332e08957153c9b 380 Gene3D G3DSA:1.10.580.10 20 268 5.0E-78 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AL549_RS11975 6a9112f8d041b02db332e08957153c9b 380 PRINTS PR00143 Citrate synthase signature 130 143 9.1E-36 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL549_RS11975 6a9112f8d041b02db332e08957153c9b 380 PRINTS PR00143 Citrate synthase signature 256 276 9.1E-36 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL549_RS11975 6a9112f8d041b02db332e08957153c9b 380 PRINTS PR00143 Citrate synthase signature 333 347 9.1E-36 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL549_RS11975 6a9112f8d041b02db332e08957153c9b 380 PRINTS PR00143 Citrate synthase signature 181 196 9.1E-36 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL549_RS11975 6a9112f8d041b02db332e08957153c9b 380 PRINTS PR00143 Citrate synthase signature 313 329 9.1E-36 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL549_RS11975 6a9112f8d041b02db332e08957153c9b 380 PRINTS PR00143 Citrate synthase signature 203 231 9.1E-36 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL549_RS11975 6a9112f8d041b02db332e08957153c9b 380 PIRSF PIRSF001369 10 380 2.6E-116 T 28-03-2018 IPR024176 Citrate synthase, bacterial-type AL549_RS11975 6a9112f8d041b02db332e08957153c9b 380 Gene3D G3DSA:1.10.580.10 304 360 1.9E-8 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AL549_RS23720 f91bdeb633e34bf876f618c57ee39f91 238 Pfam PF04402 Protein of unknown function (DUF541) 41 211 1.2E-15 T 28-03-2018 IPR007497 Protein of unknown function DUF541 AL549_RS23720 f91bdeb633e34bf876f618c57ee39f91 238 PIRSF PIRSF029033 1 238 1.9E-102 T 28-03-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein AL549_RS21840 006d3fe3b073c67f6a283fc12f5fc6e8 467 Gene3D G3DSA:1.10.1140.10 355 465 1.9E-40 T 28-03-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL549_RS21840 006d3fe3b073c67f6a283fc12f5fc6e8 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 6.3E-61 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL549_RS21840 006d3fe3b073c67f6a283fc12f5fc6e8 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL549_RS21840 006d3fe3b073c67f6a283fc12f5fc6e8 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 56.205 T 28-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AL549_RS21840 006d3fe3b073c67f6a283fc12f5fc6e8 467 Gene3D G3DSA:2.40.10.170 1 75 6.3E-31 T 28-03-2018 AL549_RS21840 006d3fe3b073c67f6a283fc12f5fc6e8 467 Gene3D G3DSA:3.40.50.300 76 354 7.8E-87 T 28-03-2018 AL549_RS21840 006d3fe3b073c67f6a283fc12f5fc6e8 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 2.3E-249 T 28-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AL549_RS21840 006d3fe3b073c67f6a283fc12f5fc6e8 467 SUPERFAMILY SSF52540 77 355 8.49E-87 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS21840 006d3fe3b073c67f6a283fc12f5fc6e8 467 SUPERFAMILY SSF47917 352 466 1.73E-50 T 28-03-2018 AL549_RS21840 006d3fe3b073c67f6a283fc12f5fc6e8 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 8.1E-21 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL549_RS21840 006d3fe3b073c67f6a283fc12f5fc6e8 467 SMART SM00382 142 334 5.5E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS21840 006d3fe3b073c67f6a283fc12f5fc6e8 467 SUPERFAMILY SSF50615 1 75 1.91E-25 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL549_RS13110 83e31389b51053106d5e7238c9d3fc7e 169 SUPERFAMILY SSF55729 2 162 7.33E-28 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS13110 83e31389b51053106d5e7238c9d3fc7e 169 Gene3D G3DSA:3.40.630.30 1 167 5.0E-27 T 28-03-2018 AL549_RS13110 83e31389b51053106d5e7238c9d3fc7e 169 Pfam PF13420 Acetyltransferase (GNAT) domain 3 158 1.4E-23 T 28-03-2018 AL549_RS02650 52aed11b5bad33c00f83cac9290500f1 157 Gene3D G3DSA:3.40.35.10 3 157 4.5E-57 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AL549_RS02650 52aed11b5bad33c00f83cac9290500f1 157 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 151 6.1E-68 T 28-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 AL549_RS02650 52aed11b5bad33c00f83cac9290500f1 157 SUPERFAMILY SSF52728 3 156 9.68E-52 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AL549_RS02650 52aed11b5bad33c00f83cac9290500f1 157 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 4.4E-51 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AL549_RS07555 8bf2d7e33bbd431155622387886e4bb1 255 Pfam PF08478 POTRA domain, FtsQ-type 54 123 2.3E-18 T 28-03-2018 IPR013685 POTRA domain, FtsQ-type AL549_RS07555 8bf2d7e33bbd431155622387886e4bb1 255 Pfam PF03799 Cell division protein FtsQ 127 239 2.2E-24 T 28-03-2018 IPR005548 Cell division protein FtsQ/DivIB AL549_RS07555 8bf2d7e33bbd431155622387886e4bb1 255 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 23 247 22.339 T 28-03-2018 IPR026579 Cell division protein FtsQ GO:0090529 AL549_RS06410 cc7a7ccb499b1956e091893c8524af10 337 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 32 287 1.5E-30 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AL549_RS06410 cc7a7ccb499b1956e091893c8524af10 337 SUPERFAMILY SSF53822 33 297 4.52E-35 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS06410 cc7a7ccb499b1956e091893c8524af10 337 Gene3D G3DSA:3.40.50.2300 151 299 3.5E-14 T 28-03-2018 AL549_RS06410 cc7a7ccb499b1956e091893c8524af10 337 Gene3D G3DSA:3.40.50.2300 30 150 2.1E-14 T 28-03-2018 AL549_RS06410 cc7a7ccb499b1956e091893c8524af10 337 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 33 331 9.7E-135 T 28-03-2018 IPR014301 TMAO reductase system, periplasmic protein TorT AL549_RS15625 5f36c98bc2f8e9e094c620d347321808 950 Gene3D G3DSA:2.40.50.70 410 442 5.5E-7 T 28-03-2018 AL549_RS15625 5f36c98bc2f8e9e094c620d347321808 950 Gene3D G3DSA:2.40.50.70 235 279 1.9E-6 T 28-03-2018 AL549_RS15625 5f36c98bc2f8e9e094c620d347321808 950 Gene3D G3DSA:2.40.50.70 497 552 1.5E-10 T 28-03-2018 AL549_RS15625 5f36c98bc2f8e9e094c620d347321808 950 SUPERFAMILY SSF51445 615 723 2.2E-36 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS15625 5f36c98bc2f8e9e094c620d347321808 950 SUPERFAMILY SSF51445 761 810 2.2E-36 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS15625 5f36c98bc2f8e9e094c620d347321808 950 SUPERFAMILY SSF51445 837 933 2.2E-36 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS15625 5f36c98bc2f8e9e094c620d347321808 950 SMART SM00636 616 929 0.0024 T 28-03-2018 IPR011583 Chitinase II GO:0008061 AL549_RS15625 5f36c98bc2f8e9e094c620d347321808 950 Gene3D G3DSA:2.60.40.10 280 343 0.012 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS15625 5f36c98bc2f8e9e094c620d347321808 950 Gene3D G3DSA:2.10.10.20 344 409 3.5E-8 T 28-03-2018 AL549_RS15625 5f36c98bc2f8e9e094c620d347321808 950 Gene3D G3DSA:2.60.40.10 443 496 3.6E-7 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS15625 5f36c98bc2f8e9e094c620d347321808 950 Pfam PF00704 Glycosyl hydrolases family 18 618 928 2.7E-20 T 28-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AL549_RS15625 5f36c98bc2f8e9e094c620d347321808 950 Gene3D G3DSA:2.60.40.10 155 234 0.001 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS15625 5f36c98bc2f8e9e094c620d347321808 950 Gene3D G3DSA:3.20.20.80 611 939 2.0E-38 T 28-03-2018 AL549_RS06950 b0c7de7529af359b08451ba2b863357e 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 280 6.0E-63 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AL549_RS06950 b0c7de7529af359b08451ba2b863357e 312 Gene3D G3DSA:3.40.190.10 19 152 1.3E-21 T 28-03-2018 AL549_RS06950 b0c7de7529af359b08451ba2b863357e 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 19 306 1.6E-147 T 28-03-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 AL549_RS06950 b0c7de7529af359b08451ba2b863357e 312 Gene3D G3DSA:3.40.190.10 153 312 8.2E-34 T 28-03-2018 AL549_RS06950 b0c7de7529af359b08451ba2b863357e 312 SUPERFAMILY SSF53850 20 295 2.12E-90 T 28-03-2018 AL549_RS16505 1eef18a43e3bedb1cfba2b172623198d 293 SUPERFAMILY SSF117396 9 271 4.32E-72 T 28-03-2018 IPR002763 Protein of unknown function DUF72 AL549_RS16505 1eef18a43e3bedb1cfba2b172623198d 293 Gene3D G3DSA:3.20.20.410 1 273 1.2E-68 T 28-03-2018 IPR002763 Protein of unknown function DUF72 AL549_RS16505 1eef18a43e3bedb1cfba2b172623198d 293 Pfam PF01904 Protein of unknown function DUF72 28 267 3.7E-53 T 28-03-2018 IPR002763 Protein of unknown function DUF72 AL549_RS02765 5a93b3f52ca57da97fb26b2cd05607d3 333 Gene3D G3DSA:3.30.70.270 172 333 4.3E-46 T 28-03-2018 AL549_RS02765 5a93b3f52ca57da97fb26b2cd05607d3 333 SMART SM00267 168 333 6.3E-34 T 28-03-2018 IPR000160 GGDEF domain AL549_RS02765 5a93b3f52ca57da97fb26b2cd05607d3 333 SUPERFAMILY SSF55073 184 332 8.63E-38 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS02765 5a93b3f52ca57da97fb26b2cd05607d3 333 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 330 1.7E-34 T 28-03-2018 IPR000160 GGDEF domain AL549_RS02765 5a93b3f52ca57da97fb26b2cd05607d3 333 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 176 332 8.4E-38 T 28-03-2018 IPR000160 GGDEF domain AL549_RS07705 17363fdcef7a4d56c89a7bf17975f43d 160 Gene3D G3DSA:3.50.30.40 2 159 1.1E-42 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL549_RS07705 17363fdcef7a4d56c89a7bf17975f43d 160 Pfam PF03737 Aldolase/RraA 5 152 2.9E-42 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL549_RS07705 17363fdcef7a4d56c89a7bf17975f43d 160 SUPERFAMILY SSF89562 1 155 3.14E-47 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL549_RS07705 17363fdcef7a4d56c89a7bf17975f43d 160 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.1E-71 T 28-03-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AL549_RS12400 2140589703731028a6ea05b672ee453d 869 Gene3D G3DSA:1.25.50.10 545 867 4.4E-114 T 28-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AL549_RS12400 2140589703731028a6ea05b672ee453d 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.5E-9 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL549_RS12400 2140589703731028a6ea05b672ee453d 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.5E-9 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL549_RS12400 2140589703731028a6ea05b672ee453d 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.5E-9 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL549_RS12400 2140589703731028a6ea05b672ee453d 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.5E-9 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL549_RS12400 2140589703731028a6ea05b672ee453d 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.5E-9 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL549_RS12400 2140589703731028a6ea05b672ee453d 869 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 544 1.3E-33 T 28-03-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold AL549_RS12400 2140589703731028a6ea05b672ee453d 869 SUPERFAMILY SSF55486 203 449 9.08E-74 T 28-03-2018 AL549_RS12400 2140589703731028a6ea05b672ee453d 869 Pfam PF01433 Peptidase family M1 domain 208 435 9.8E-58 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL549_RS12400 2140589703731028a6ea05b672ee453d 869 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 547 867 4.8E-110 T 28-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AL549_RS12400 2140589703731028a6ea05b672ee453d 869 Gene3D G3DSA:2.60.40.1730 15 193 2.0E-31 T 28-03-2018 AL549_RS12400 2140589703731028a6ea05b672ee453d 869 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 28-03-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 AL549_RS12400 2140589703731028a6ea05b672ee453d 869 SUPERFAMILY SSF63737 2 192 1.96E-47 T 28-03-2018 AL549_RS12400 2140589703731028a6ea05b672ee453d 869 Gene3D G3DSA:1.10.390.10 279 442 9.0E-51 T 28-03-2018 AL549_RS16430 46004e9c732ca6de3281633b5daf0dc4 181 SUPERFAMILY SSF103088 72 181 1.44E-33 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS16430 46004e9c732ca6de3281633b5daf0dc4 181 Pfam PF00691 OmpA family 80 175 2.5E-22 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS16430 46004e9c732ca6de3281633b5daf0dc4 181 Gene3D G3DSA:3.30.1330.60 51 181 3.1E-35 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS16430 46004e9c732ca6de3281633b5daf0dc4 181 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 78 181 1.6E-44 T 28-03-2018 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 AL549_RS16430 46004e9c732ca6de3281633b5daf0dc4 181 PRINTS PR01021 OMPA domain signature 81 103 1.5E-16 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS16430 46004e9c732ca6de3281633b5daf0dc4 181 PRINTS PR01021 OMPA domain signature 111 126 1.5E-16 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS16430 46004e9c732ca6de3281633b5daf0dc4 181 PRINTS PR01021 OMPA domain signature 126 142 1.5E-16 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS16430 46004e9c732ca6de3281633b5daf0dc4 181 ProSitePatterns PS01068 OmpA-like domain. 113 157 - T 28-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AL549_RS03830 42397b10cde257c5b110ab49b8efeeaf 425 SUPERFAMILY SSF51556 54 372 9.64E-106 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL549_RS03830 42397b10cde257c5b110ab49b8efeeaf 425 Pfam PF07969 Amidohydrolase family 42 403 1.8E-53 T 28-03-2018 IPR013108 Amidohydrolase 3 AL549_RS03830 42397b10cde257c5b110ab49b8efeeaf 425 Gene3D G3DSA:2.30.40.10 1 65 7.2E-5 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS03830 42397b10cde257c5b110ab49b8efeeaf 425 SUPERFAMILY SSF51338 1 76 3.02E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS03830 42397b10cde257c5b110ab49b8efeeaf 425 Gene3D G3DSA:3.20.20.140 66 362 6.2E-40 T 28-03-2018 AL549_RS15745 3eb79653811f9244e07d0beca52d020c 935 Gene3D G3DSA:3.30.420.40 230 432 1.5E-14 T 28-03-2018 AL549_RS15745 3eb79653811f9244e07d0beca52d020c 935 SUPERFAMILY SSF53067 403 456 1.78E-22 T 28-03-2018 AL549_RS15745 3eb79653811f9244e07d0beca52d020c 935 SUPERFAMILY SSF53067 223 369 1.78E-22 T 28-03-2018 AL549_RS15745 3eb79653811f9244e07d0beca52d020c 935 Gene3D G3DSA:3.30.420.40 5 229 5.7E-33 T 28-03-2018 AL549_RS15745 3eb79653811f9244e07d0beca52d020c 935 Pfam PF00012 Hsp70 protein 81 316 2.6E-18 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS15745 3eb79653811f9244e07d0beca52d020c 935 Pfam PF12531 DNA-K related protein 685 932 5.7E-100 T 28-03-2018 IPR021030 Protein of unknown function DUF3731 AL549_RS15745 3eb79653811f9244e07d0beca52d020c 935 SUPERFAMILY SSF53067 5 209 1.65E-31 T 28-03-2018 AL549_RS15745 3eb79653811f9244e07d0beca52d020c 935 PRINTS PR00301 70kDa heat shock protein signature 6 19 3.3E-9 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS15745 3eb79653811f9244e07d0beca52d020c 935 PRINTS PR00301 70kDa heat shock protein signature 165 185 3.3E-9 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS15745 3eb79653811f9244e07d0beca52d020c 935 PRINTS PR00301 70kDa heat shock protein signature 398 418 3.3E-9 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS15745 3eb79653811f9244e07d0beca52d020c 935 PRINTS PR00301 70kDa heat shock protein signature 232 242 3.3E-9 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL549_RS20725 2fa7d0ebd412d85fd245e30d4eedb924 302 Gene3D G3DSA:1.20.1510.10 8 206 9.6E-41 T 28-03-2018 AL549_RS20725 2fa7d0ebd412d85fd245e30d4eedb924 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 287 1.3E-70 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL549_RS20725 2fa7d0ebd412d85fd245e30d4eedb924 302 SUPERFAMILY SSF160240 210 288 3.4E-24 T 28-03-2018 AL549_RS20725 2fa7d0ebd412d85fd245e30d4eedb924 302 Gene3D G3DSA:3.30.70.1350 207 290 3.2E-24 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain AL549_RS20725 2fa7d0ebd412d85fd245e30d4eedb924 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 4.7E-25 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain AL549_RS20725 2fa7d0ebd412d85fd245e30d4eedb924 302 Pfam PF01545 Cation efflux family 15 206 4.7E-44 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL549_RS20725 2fa7d0ebd412d85fd245e30d4eedb924 302 SUPERFAMILY SSF161111 8 207 1.57E-51 T 28-03-2018 AL549_RS10255 4e07e0b60a5e35722bd510ccbcd48a04 144 Gene3D G3DSA:1.25.40.10 2 135 1.9E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS10255 4e07e0b60a5e35722bd510ccbcd48a04 144 Pfam PF10952 Protein of unknown function (DUF2753) 5 144 1.7E-72 T 28-03-2018 IPR020206 Uncharacterised protein family, VP2110 AL549_RS10255 4e07e0b60a5e35722bd510ccbcd48a04 144 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 1 143 6.0E-72 T 28-03-2018 IPR020206 Uncharacterised protein family, VP2110 AL549_RS20690 adc4b6dfc7956aeb244b9e3c319526e6 340 Gene3D G3DSA:3.20.20.70 99 318 7.5E-16 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS20690 adc4b6dfc7956aeb244b9e3c319526e6 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 11 328 6.4E-124 T 28-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AL549_RS20690 adc4b6dfc7956aeb244b9e3c319526e6 340 SUPERFAMILY SSF102114 102 324 1.96E-25 T 28-03-2018 AL549_RS20690 adc4b6dfc7956aeb244b9e3c319526e6 340 Pfam PF13353 4Fe-4S single cluster domain 115 183 4.0E-7 T 28-03-2018 AL549_RS20690 adc4b6dfc7956aeb244b9e3c319526e6 340 PIRSF PIRSF004911 3 340 5.9E-116 T 28-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AL549_RS20690 adc4b6dfc7956aeb244b9e3c319526e6 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 3.6E-155 T 28-03-2018 IPR022462 Lysine-2,3-aminomutase-like AL549_RS20690 adc4b6dfc7956aeb244b9e3c319526e6 340 Pfam PF04055 Radical SAM superfamily 117 239 1.8E-8 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS05130 af381ceedb0cca89c85ecb41b7d57392 611 SUPERFAMILY SSF69279 13 195 4.31E-41 T 28-03-2018 AL549_RS05130 af381ceedb0cca89c85ecb41b7d57392 611 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 24 513 1.2E-104 T 28-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AL549_RS05130 af381ceedb0cca89c85ecb41b7d57392 611 SUPERFAMILY SSF69279 209 367 3.74E-10 T 28-03-2018 AL549_RS05130 af381ceedb0cca89c85ecb41b7d57392 611 Gene3D G3DSA:2.40.50.230 378 460 2.4E-36 T 28-03-2018 IPR006531 Gp5 N-terminal AL549_RS05130 af381ceedb0cca89c85ecb41b7d57392 611 Pfam PF05954 Phage late control gene D protein (GPD) 30 333 1.1E-72 T 28-03-2018 AL549_RS05130 af381ceedb0cca89c85ecb41b7d57392 611 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 531 2.9E-178 T 28-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AL549_RS05130 af381ceedb0cca89c85ecb41b7d57392 611 Gene3D G3DSA:3.55.50.10 109 199 9.5E-26 T 28-03-2018 AL549_RS05130 af381ceedb0cca89c85ecb41b7d57392 611 SUPERFAMILY SSF69349 450 601 1.1E-38 T 28-03-2018 AL549_RS05130 af381ceedb0cca89c85ecb41b7d57392 611 SUPERFAMILY SSF69255 372 460 3.14E-33 T 28-03-2018 AL549_RS15670 9da018ed4a8ff86afde16f7df567332c 358 SUPERFAMILY SSF52172 20 119 2.16E-5 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS15670 9da018ed4a8ff86afde16f7df567332c 358 Gene3D G3DSA:3.40.50.300 125 357 9.0E-24 T 28-03-2018 AL549_RS15670 9da018ed4a8ff86afde16f7df567332c 358 Gene3D G3DSA:3.40.50.2300 9 124 1.2E-5 T 28-03-2018 AL549_RS15670 9da018ed4a8ff86afde16f7df567332c 358 SUPERFAMILY SSF52540 126 355 1.04E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS15670 9da018ed4a8ff86afde16f7df567332c 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 127 179 6.7E-7 T 28-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AL549_RS05870 32c941ea5a067860f97fe70ec193e783 825 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 804 1.6E-164 T 28-03-2018 IPR020009 Extracellular lipase, Pla-1/cef family AL549_RS05870 32c941ea5a067860f97fe70ec193e783 825 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 278 9.0E-77 T 28-03-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain AL549_RS05870 32c941ea5a067860f97fe70ec193e783 825 Gene3D G3DSA:3.40.50.1820 444 803 5.9E-8 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS05870 32c941ea5a067860f97fe70ec193e783 825 SUPERFAMILY SSF53474 462 619 1.44E-9 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS05870 32c941ea5a067860f97fe70ec193e783 825 SUPERFAMILY SSF53474 710 737 1.44E-9 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS17395 19c20735a79bb1141cb020bddb97b963 244 Pfam PF04539 Sigma-70 region 3 101 171 3.3E-12 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS17395 19c20735a79bb1141cb020bddb97b963 244 PIRSF PIRSF000770 3 243 2.4E-37 T 28-03-2018 AL549_RS17395 19c20735a79bb1141cb020bddb97b963 244 Gene3D G3DSA:1.10.10.10 92 139 5.7E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS17395 19c20735a79bb1141cb020bddb97b963 244 SUPERFAMILY SSF88946 6 91 2.75E-24 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS17395 19c20735a79bb1141cb020bddb97b963 244 Pfam PF04542 Sigma-70 region 2 19 91 4.8E-17 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS17395 19c20735a79bb1141cb020bddb97b963 244 Pfam PF04545 Sigma-70, region 4 187 234 2.5E-17 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS17395 19c20735a79bb1141cb020bddb97b963 244 Gene3D G3DSA:1.10.10.10 159 244 4.4E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS17395 19c20735a79bb1141cb020bddb97b963 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 237 3.9E-31 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS17395 19c20735a79bb1141cb020bddb97b963 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 19 238 3.1E-84 T 28-03-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL549_RS17395 19c20735a79bb1141cb020bddb97b963 244 Gene3D G3DSA:1.10.1740.10 3 89 2.8E-20 T 28-03-2018 AL549_RS17395 19c20735a79bb1141cb020bddb97b963 244 SUPERFAMILY SSF88659 161 239 1.25E-19 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS17395 19c20735a79bb1141cb020bddb97b963 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 2.1E-11 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS17395 19c20735a79bb1141cb020bddb97b963 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 2.1E-11 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS17395 19c20735a79bb1141cb020bddb97b963 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 2.1E-11 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS17395 19c20735a79bb1141cb020bddb97b963 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 2.1E-11 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS17395 19c20735a79bb1141cb020bddb97b963 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 240 63.819 T 28-03-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL549_RS17395 19c20735a79bb1141cb020bddb97b963 244 SUPERFAMILY SSF88659 92 159 1.09E-14 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS08315 0a037777869756efb3dc571de155339a 340 Pfam PF00990 Diguanylate cyclase, GGDEF domain 181 333 2.4E-34 T 28-03-2018 IPR000160 GGDEF domain AL549_RS08315 0a037777869756efb3dc571de155339a 340 Gene3D G3DSA:3.30.450.40 3 172 8.0E-27 T 28-03-2018 IPR029016 GAF domain-like AL549_RS08315 0a037777869756efb3dc571de155339a 340 SMART SM00065 25 177 5.4E-13 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL549_RS08315 0a037777869756efb3dc571de155339a 340 SUPERFAMILY SSF55781 7 168 4.58E-28 T 28-03-2018 IPR029016 GAF domain-like AL549_RS08315 0a037777869756efb3dc571de155339a 340 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 181 333 1.0E-33 T 28-03-2018 IPR000160 GGDEF domain AL549_RS08315 0a037777869756efb3dc571de155339a 340 Pfam PF13185 GAF domain 26 168 3.2E-17 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL549_RS08315 0a037777869756efb3dc571de155339a 340 SMART SM00267 169 337 1.0E-36 T 28-03-2018 IPR000160 GGDEF domain AL549_RS08315 0a037777869756efb3dc571de155339a 340 Gene3D G3DSA:3.30.70.270 173 337 8.6E-42 T 28-03-2018 AL549_RS08315 0a037777869756efb3dc571de155339a 340 SUPERFAMILY SSF55073 185 332 1.33E-35 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS14145 65c46a157177f60e232c450568c98d10 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 3.6E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS11650 9dd9d6a90436565931b1d3c34abe4993 255 Pfam PF02253 Phospholipase A1 19 252 4.5E-60 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL549_RS11650 9dd9d6a90436565931b1d3c34abe4993 255 Gene3D G3DSA:2.40.230.10 14 255 8.0E-64 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL549_RS11650 9dd9d6a90436565931b1d3c34abe4993 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 54 71 4.1E-26 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL549_RS11650 9dd9d6a90436565931b1d3c34abe4993 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 203 220 4.1E-26 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL549_RS11650 9dd9d6a90436565931b1d3c34abe4993 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 225 245 4.1E-26 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL549_RS11650 9dd9d6a90436565931b1d3c34abe4993 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 123 137 4.1E-26 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL549_RS11650 9dd9d6a90436565931b1d3c34abe4993 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 138 156 4.1E-26 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL549_RS11650 9dd9d6a90436565931b1d3c34abe4993 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 170 188 4.1E-26 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL549_RS11650 9dd9d6a90436565931b1d3c34abe4993 255 SUPERFAMILY SSF56931 14 255 2.62E-71 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL549_RS05370 b4e538c60afa459b535489ab9e1e9549 193 SUPERFAMILY SSF52738 6 191 3.79E-57 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL549_RS05370 b4e538c60afa459b535489ab9e1e9549 193 Pfam PF01339 CheB methylesterase 11 186 2.0E-55 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL549_RS05370 b4e538c60afa459b535489ab9e1e9549 193 Gene3D G3DSA:3.40.50.180 3 193 1.2E-66 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL549_RS12085 e16869c3aa71e533b6b68e45d00fb382 249 Gene3D G3DSA:3.40.50.300 4 248 1.3E-77 T 28-03-2018 AL549_RS12085 e16869c3aa71e533b6b68e45d00fb382 249 SUPERFAMILY SSF52540 8 242 1.77E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS12085 e16869c3aa71e533b6b68e45d00fb382 249 SMART SM00382 33 220 1.3E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS12085 e16869c3aa71e533b6b68e45d00fb382 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS12085 e16869c3aa71e533b6b68e45d00fb382 249 Pfam PF00005 ABC transporter 24 172 4.4E-39 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS12085 e16869c3aa71e533b6b68e45d00fb382 249 PIRSF PIRSF039085 5 248 1.4E-111 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL549_RS05145 a0acbef671426b00be233e4c3311039e 1487 Pfam PF05593 RHS Repeat 311 346 2.2E-7 T 28-03-2018 IPR031325 RHS repeat AL549_RS05145 a0acbef671426b00be233e4c3311039e 1487 Pfam PF05593 RHS Repeat 588 628 6.9E-5 T 28-03-2018 IPR031325 RHS repeat AL549_RS05145 a0acbef671426b00be233e4c3311039e 1487 Pfam PF05593 RHS Repeat 421 457 3.3E-7 T 28-03-2018 IPR031325 RHS repeat AL549_RS05145 a0acbef671426b00be233e4c3311039e 1487 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 441 472 2.9E-5 T 28-03-2018 IPR006530 YD repeat AL549_RS05145 a0acbef671426b00be233e4c3311039e 1487 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 504 545 7.6E-4 T 28-03-2018 IPR006530 YD repeat AL549_RS05145 a0acbef671426b00be233e4c3311039e 1487 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1054 1129 4.6E-29 T 28-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 AL549_RS05145 a0acbef671426b00be233e4c3311039e 1487 Pfam PF03527 RHS protein 1027 1063 2.0E-16 T 28-03-2018 IPR001826 RHS protein AL549_RS05145 a0acbef671426b00be233e4c3311039e 1487 PRINTS PR00394 RHS protein signature 1021 1041 6.8E-14 T 28-03-2018 IPR001826 RHS protein AL549_RS05145 a0acbef671426b00be233e4c3311039e 1487 PRINTS PR00394 RHS protein signature 1074 1094 6.8E-14 T 28-03-2018 IPR001826 RHS protein AL549_RS05145 a0acbef671426b00be233e4c3311039e 1487 PRINTS PR00394 RHS protein signature 1097 1116 6.8E-14 T 28-03-2018 IPR001826 RHS protein AL549_RS12460 76c1f3ecc4b15cabc3f25107f910ce8d 149 Pfam PF06303 MatP N-terminal domain 2 85 6.5E-42 T 28-03-2018 IPR035087 MatP, N-terminal AL549_RS12460 76c1f3ecc4b15cabc3f25107f910ce8d 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 123 4.0E-67 T 28-03-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AL549_RS12460 76c1f3ecc4b15cabc3f25107f910ce8d 149 Gene3D G3DSA:1.20.890.20 2 47 0.03 T 28-03-2018 AL549_RS12460 76c1f3ecc4b15cabc3f25107f910ce8d 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 4.2E-26 T 28-03-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain AL549_RS12460 76c1f3ecc4b15cabc3f25107f910ce8d 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 28.988 T 28-03-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AL549_RS18480 8d88009d12308b1bcc32600aa6b611b2 150 SUPERFAMILY SSF55729 1 145 6.08E-31 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS18480 8d88009d12308b1bcc32600aa6b611b2 150 Pfam PF00583 Acetyltransferase (GNAT) family 15 121 6.5E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS18480 8d88009d12308b1bcc32600aa6b611b2 150 Gene3D G3DSA:3.40.630.30 3 148 1.6E-30 T 28-03-2018 AL549_RS18480 8d88009d12308b1bcc32600aa6b611b2 150 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 143 3.7E-37 T 28-03-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 AL549_RS23515 c458952e90dc4cd0483e38fa427438a0 145 Pfam PF00582 Universal stress protein family 1 142 1.1E-32 T 28-03-2018 IPR006016 UspA GO:0006950 AL549_RS23515 c458952e90dc4cd0483e38fa427438a0 145 Gene3D G3DSA:3.40.50.620 1 145 1.1E-35 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS23515 c458952e90dc4cd0483e38fa427438a0 145 PRINTS PR01438 Universal stress protein signature 2 20 9.5E-12 T 28-03-2018 IPR006015 Universal stress protein A AL549_RS23515 c458952e90dc4cd0483e38fa427438a0 145 PRINTS PR01438 Universal stress protein signature 102 114 9.5E-12 T 28-03-2018 IPR006015 Universal stress protein A AL549_RS23515 c458952e90dc4cd0483e38fa427438a0 145 PRINTS PR01438 Universal stress protein signature 120 142 9.5E-12 T 28-03-2018 IPR006015 Universal stress protein A AL549_RS23515 c458952e90dc4cd0483e38fa427438a0 145 SUPERFAMILY SSF52402 2 144 2.85E-36 T 28-03-2018 AL549_RS23515 c458952e90dc4cd0483e38fa427438a0 145 PIRSF PIRSF006276 1 145 6.8E-21 T 28-03-2018 IPR006015 Universal stress protein A AL549_RS21345 9a7d9a6460e88010f1613764f7f48f8d 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 3.2E-20 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL549_RS21345 9a7d9a6460e88010f1613764f7f48f8d 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 214 5.9E-81 T 28-03-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL549_RS21345 9a7d9a6460e88010f1613764f7f48f8d 312 SUPERFAMILY SSF54782 221 310 2.75E-28 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL549_RS21345 9a7d9a6460e88010f1613764f7f48f8d 312 Gene3D G3DSA:3.40.190.10 108 200 1.2E-38 T 28-03-2018 AL549_RS21345 9a7d9a6460e88010f1613764f7f48f8d 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 3.6E-48 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL549_RS21345 9a7d9a6460e88010f1613764f7f48f8d 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 3.6E-48 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL549_RS21345 9a7d9a6460e88010f1613764f7f48f8d 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 3.6E-48 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL549_RS21345 9a7d9a6460e88010f1613764f7f48f8d 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 3.6E-48 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL549_RS21345 9a7d9a6460e88010f1613764f7f48f8d 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 3.6E-48 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL549_RS21345 9a7d9a6460e88010f1613764f7f48f8d 312 Gene3D G3DSA:3.40.190.10 1 107 7.4E-47 T 28-03-2018 AL549_RS21345 9a7d9a6460e88010f1613764f7f48f8d 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 28-03-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL549_RS21345 9a7d9a6460e88010f1613764f7f48f8d 312 PIRSF PIRSF001438 1 312 1.9E-124 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL549_RS21345 9a7d9a6460e88010f1613764f7f48f8d 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 40.204 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL549_RS21345 9a7d9a6460e88010f1613764f7f48f8d 312 Gene3D G3DSA:3.30.160.40 222 305 3.7E-24 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL549_RS21345 9a7d9a6460e88010f1613764f7f48f8d 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 2.0E-116 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL549_RS21345 9a7d9a6460e88010f1613764f7f48f8d 312 SUPERFAMILY SSF53850 6 220 2.63E-87 T 28-03-2018 AL549_RS00945 7192c8e57f4983851875d0643a2e5d13 288 Gene3D G3DSA:3.60.130.10 5 286 5.0E-70 T 28-03-2018 AL549_RS00945 7192c8e57f4983851875d0643a2e5d13 288 SUPERFAMILY SSF51197 8 283 2.01E-83 T 28-03-2018 AL549_RS00945 7192c8e57f4983851875d0643a2e5d13 288 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 11 276 9.5E-60 T 28-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AL549_RS05495 cc7b6f7930aa3b38fc71a85643ca54f1 294 SUPERFAMILY SSF46689 243 292 1.25E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS05495 cc7b6f7930aa3b38fc71a85643ca54f1 294 Gene3D G3DSA:1.10.10.60 247 294 2.9E-13 T 28-03-2018 AL549_RS05495 cc7b6f7930aa3b38fc71a85643ca54f1 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL549_RS05495 cc7b6f7930aa3b38fc71a85643ca54f1 294 Gene3D G3DSA:2.60.120.280 38 174 1.4E-6 T 28-03-2018 AL549_RS05495 cc7b6f7930aa3b38fc71a85643ca54f1 294 SUPERFAMILY SSF51215 35 174 1.11E-10 T 28-03-2018 AL549_RS05495 cc7b6f7930aa3b38fc71a85643ca54f1 294 Gene3D G3DSA:1.10.10.60 175 246 2.0E-9 T 28-03-2018 AL549_RS05495 cc7b6f7930aa3b38fc71a85643ca54f1 294 Pfam PF12833 Helix-turn-helix domain 214 291 1.0E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS05495 cc7b6f7930aa3b38fc71a85643ca54f1 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 2.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS05495 cc7b6f7930aa3b38fc71a85643ca54f1 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 2.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS05495 cc7b6f7930aa3b38fc71a85643ca54f1 294 SMART SM00342 207 290 4.4E-28 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS03365 a048b482ea7f85d10fe6be199dd43059 298 Gene3D G3DSA:1.10.10.10 1 87 5.2E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03365 a048b482ea7f85d10fe6be199dd43059 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.7E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03365 a048b482ea7f85d10fe6be199dd43059 298 Pfam PF03466 LysR substrate binding domain 99 294 1.5E-19 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS03365 a048b482ea7f85d10fe6be199dd43059 298 SUPERFAMILY SSF53850 95 294 3.26E-33 T 28-03-2018 AL549_RS03365 a048b482ea7f85d10fe6be199dd43059 298 Gene3D G3DSA:3.40.190.10 177 268 5.5E-13 T 28-03-2018 AL549_RS03365 a048b482ea7f85d10fe6be199dd43059 298 SUPERFAMILY SSF46785 4 86 2.62E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03365 a048b482ea7f85d10fe6be199dd43059 298 Gene3D G3DSA:3.40.190.10 95 176 4.0E-5 T 28-03-2018 AL549_RS03365 a048b482ea7f85d10fe6be199dd43059 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03365 a048b482ea7f85d10fe6be199dd43059 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03365 a048b482ea7f85d10fe6be199dd43059 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS07905 5bae558ac2cd11c8b129ae82765620ba 143 SUPERFAMILY SSF54534 4 142 9.04E-37 T 28-03-2018 AL549_RS07905 5bae558ac2cd11c8b129ae82765620ba 143 Gene3D G3DSA:3.10.50.40 1 143 2.1E-19 T 28-03-2018 AL549_RS07905 5bae558ac2cd11c8b129ae82765620ba 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 139 9.6E-13 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL549_RS11110 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 7.7E-46 T 28-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AL549_RS11110 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 SUPERFAMILY SSF53850 5 222 4.25E-67 T 28-03-2018 AL549_RS11110 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 28-03-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 AL549_RS11110 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.48 T 28-03-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 AL549_RS11110 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 3.3E-55 T 28-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AL549_RS11110 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 Gene3D G3DSA:3.40.190.10 1 127 4.0E-35 T 28-03-2018 AL549_RS11110 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 Gene3D G3DSA:3.40.190.10 128 222 9.2E-21 T 28-03-2018 AL549_RS11110 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 202 297 1.6E-30 T 28-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AL549_RS11110 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 Pfam PF08029 HisG, C-terminal domain 222 295 5.1E-24 T 28-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AL549_RS11110 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 Gene3D G3DSA:3.30.70.120 226 297 6.7E-24 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL549_RS11110 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 SUPERFAMILY SSF54913 225 297 5.23E-21 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL549_RS19060 984597e5e15a9a19dbde2d45e7c34b49 63 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 56 1.8E-29 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AL549_RS19060 984597e5e15a9a19dbde2d45e7c34b49 63 Pfam PF02599 Global regulator protein family 1 52 1.4E-26 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AL549_RS19060 984597e5e15a9a19dbde2d45e7c34b49 63 Hamap MF_00167 Carbon storage regulator [csrA]. 1 62 20.442 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AL549_RS19060 984597e5e15a9a19dbde2d45e7c34b49 63 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-20 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AL549_RS19060 984597e5e15a9a19dbde2d45e7c34b49 63 SUPERFAMILY SSF117130 1 54 4.32E-21 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AL549_RS14600 c7a5874df9b5f51ac7d688120c0d6228 46 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 6.9E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS05295 370a65d280c3a7cb756fa9f79dca39d1 194 Pfam PF03861 ANTAR domain 137 188 8.0E-16 T 28-03-2018 IPR005561 ANTAR domain GO:0003723 AL549_RS05295 370a65d280c3a7cb756fa9f79dca39d1 194 Gene3D G3DSA:1.10.10.10 137 190 1.8E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS05295 370a65d280c3a7cb756fa9f79dca39d1 194 SUPERFAMILY SSF52172 3 188 1.49E-21 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS05295 370a65d280c3a7cb756fa9f79dca39d1 194 SMART SM01012 133 188 2.0E-17 T 28-03-2018 IPR005561 ANTAR domain GO:0003723 AL549_RS22635 91f5d8312f1788b360799dda1e7cd2a0 453 PIRSF PIRSF037714 2 453 1.6E-172 T 28-03-2018 IPR017270 Putative MotA/TolQ/ExbB family protein AL549_RS22635 91f5d8312f1788b360799dda1e7cd2a0 453 Pfam PF01618 MotA/TolQ/ExbB proton channel family 316 434 1.0E-28 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL549_RS05875 686a2b981d424c10eb72f9104fb26ee6 185 SUPERFAMILY SSF82057 117 184 2.56E-20 T 28-03-2018 AL549_RS05875 686a2b981d424c10eb72f9104fb26ee6 185 Pfam PF03831 PhnA domain 119 184 1.4E-22 T 28-03-2018 IPR013988 PhnA protein, C-terminal AL549_RS05875 686a2b981d424c10eb72f9104fb26ee6 185 SMART SM00782 6 52 2.4E-27 T 28-03-2018 IPR013991 PhnA protein N-terminal, proteobacterial AL549_RS05875 686a2b981d424c10eb72f9104fb26ee6 185 Pfam PF08274 PhnA Zinc-Ribbon 13 52 1.5E-10 T 28-03-2018 IPR013987 PhnA protein, N-terminal AL549_RS05875 686a2b981d424c10eb72f9104fb26ee6 185 Gene3D G3DSA:2.30.30.40 118 184 2.0E-22 T 28-03-2018 AL549_RS04205 c17a19bb72b1fe45e8a4350f9c80ce36 134 Gene3D G3DSA:1.10.3680.10 2 133 2.0E-13 T 28-03-2018 IPR029024 TerB-like AL549_RS04205 c17a19bb72b1fe45e8a4350f9c80ce36 134 Pfam PF05099 Tellurite resistance protein TerB 10 110 1.9E-5 T 28-03-2018 IPR007791 Co-chaperone DjlA, N-terminal AL549_RS04205 c17a19bb72b1fe45e8a4350f9c80ce36 134 SUPERFAMILY SSF158682 5 117 1.2E-15 T 28-03-2018 AL549_RS23465 b1f4e83fd4fd197ffdba3c5546ac6c14 323 Gene3D G3DSA:3.10.580.10 198 323 5.8E-20 T 28-03-2018 AL549_RS23465 b1f4e83fd4fd197ffdba3c5546ac6c14 323 Gene3D G3DSA:3.40.50.10490 4 197 3.0E-57 T 28-03-2018 AL549_RS23465 b1f4e83fd4fd197ffdba3c5546ac6c14 323 SUPERFAMILY SSF53697 9 316 9.79E-69 T 28-03-2018 AL549_RS23465 b1f4e83fd4fd197ffdba3c5546ac6c14 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 2.9E-113 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AL549_RS23465 b1f4e83fd4fd197ffdba3c5546ac6c14 323 Pfam PF01380 SIS domain 41 172 7.3E-32 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL549_RS23465 b1f4e83fd4fd197ffdba3c5546ac6c14 323 SMART SM00116 275 322 5.0 T 28-03-2018 IPR000644 CBS domain AL549_RS23465 b1f4e83fd4fd197ffdba3c5546ac6c14 323 SMART SM00116 210 258 0.0077 T 28-03-2018 IPR000644 CBS domain AL549_RS23465 b1f4e83fd4fd197ffdba3c5546ac6c14 323 PIRSF PIRSF004692 1 323 1.5E-130 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AL549_RS23465 b1f4e83fd4fd197ffdba3c5546ac6c14 323 Pfam PF00571 CBS domain 203 258 5.7E-5 T 28-03-2018 IPR000644 CBS domain AL549_RS23465 b1f4e83fd4fd197ffdba3c5546ac6c14 323 Pfam PF00571 CBS domain 268 320 2.1E-5 T 28-03-2018 IPR000644 CBS domain AL549_RS02825 f13805566cb44c01f01ff5fe1bc9eb9e 686 PIRSF PIRSF036431 1 686 9.4E-145 T 28-03-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AL549_RS02825 f13805566cb44c01f01ff5fe1bc9eb9e 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 625 2.5E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS02825 f13805566cb44c01f01ff5fe1bc9eb9e 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 642 660 2.5E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS02825 f13805566cb44c01f01ff5fe1bc9eb9e 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 639 2.5E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS02825 f13805566cb44c01f01ff5fe1bc9eb9e 686 SMART SM00387 572 682 6.3E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS02825 f13805566cb44c01f01ff5fe1bc9eb9e 686 SMART SM00086 384 424 0.0025 T 28-03-2018 IPR001610 PAC motif AL549_RS02825 f13805566cb44c01f01ff5fe1bc9eb9e 686 Gene3D G3DSA:3.30.450.20 283 441 3.9E-18 T 28-03-2018 AL549_RS02825 f13805566cb44c01f01ff5fe1bc9eb9e 686 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 572 680 2.0E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS02825 f13805566cb44c01f01ff5fe1bc9eb9e 686 Gene3D G3DSA:1.10.287.130 442 527 1.5E-4 T 28-03-2018 AL549_RS02825 f13805566cb44c01f01ff5fe1bc9eb9e 686 Gene3D G3DSA:3.30.565.10 532 685 9.5E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS02825 f13805566cb44c01f01ff5fe1bc9eb9e 686 Pfam PF13426 PAS domain 319 422 3.8E-6 T 28-03-2018 IPR000014 PAS domain AL549_RS02825 f13805566cb44c01f01ff5fe1bc9eb9e 686 SUPERFAMILY SSF55785 321 433 1.13E-12 T 28-03-2018 IPR000014 PAS domain AL549_RS02825 f13805566cb44c01f01ff5fe1bc9eb9e 686 SUPERFAMILY SSF47384 451 528 1.08E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS02825 f13805566cb44c01f01ff5fe1bc9eb9e 686 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 305 431 1.3E-10 T 28-03-2018 IPR000014 PAS domain AL549_RS02825 f13805566cb44c01f01ff5fe1bc9eb9e 686 Gene3D G3DSA:3.30.450.20 24 180 3.0E-5 T 28-03-2018 AL549_RS02825 f13805566cb44c01f01ff5fe1bc9eb9e 686 SUPERFAMILY SSF55874 533 678 6.81E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS14485 2584602b2c3fca2dd521e39bbc5df815 314 SUPERFAMILY SSF52283 19 125 2.34E-19 T 28-03-2018 AL549_RS14485 2584602b2c3fca2dd521e39bbc5df815 314 Gene3D G3DSA:3.40.50.720 117 289 5.8E-42 T 28-03-2018 AL549_RS14485 2584602b2c3fca2dd521e39bbc5df815 314 SUPERFAMILY SSF51735 105 288 1.85E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS14485 2584602b2c3fca2dd521e39bbc5df815 314 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 20 313 5.4E-16 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AL549_RS14485 2584602b2c3fca2dd521e39bbc5df815 314 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 288 3.1E-46 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL549_RS14485 2584602b2c3fca2dd521e39bbc5df815 314 Gene3D G3DSA:3.40.50.720 1 116 1.2E-23 T 28-03-2018 AL549_RS00160 8dbd03c64fc22b452d68dd30983869f1 190 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 57 75 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL549_RS00160 8dbd03c64fc22b452d68dd30983869f1 190 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 39 57 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL549_RS00160 8dbd03c64fc22b452d68dd30983869f1 190 Gene3D G3DSA:2.150.10.10 2 70 9.5E-14 T 28-03-2018 AL549_RS00160 8dbd03c64fc22b452d68dd30983869f1 190 Gene3D G3DSA:2.150.10.10 71 187 1.9E-16 T 28-03-2018 AL549_RS00160 8dbd03c64fc22b452d68dd30983869f1 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 97 112 0.059 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL549_RS00160 8dbd03c64fc22b452d68dd30983869f1 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 25 41 5.1 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL549_RS00160 8dbd03c64fc22b452d68dd30983869f1 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 61 77 1.0 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL549_RS00160 8dbd03c64fc22b452d68dd30983869f1 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 42 59 0.0012 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL549_RS00160 8dbd03c64fc22b452d68dd30983869f1 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 79 95 4.3 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL549_RS00160 8dbd03c64fc22b452d68dd30983869f1 190 PRINTS PR00313 NodO calcium binding signature 31 42 2.4E-12 T 28-03-2018 AL549_RS00160 8dbd03c64fc22b452d68dd30983869f1 190 PRINTS PR00313 NodO calcium binding signature 70 78 2.4E-12 T 28-03-2018 AL549_RS00160 8dbd03c64fc22b452d68dd30983869f1 190 PRINTS PR00313 NodO calcium binding signature 106 115 2.4E-12 T 28-03-2018 AL549_RS00160 8dbd03c64fc22b452d68dd30983869f1 190 PRINTS PR00313 NodO calcium binding signature 43 51 2.4E-12 T 28-03-2018 AL549_RS00160 8dbd03c64fc22b452d68dd30983869f1 190 SUPERFAMILY SSF51120 6 168 9.59E-25 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL549_RS05110 ce5888a50a787ae7caea4fb9419bb6f3 608 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 608 1.4E-197 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like AL549_RS05110 ce5888a50a787ae7caea4fb9419bb6f3 608 Pfam PF05947 Type VI secretion system, TssF 6 606 1.4E-177 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like AL549_RS05110 ce5888a50a787ae7caea4fb9419bb6f3 608 PIRSF PIRSF028304 1 607 4.3E-149 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like AL549_RS21760 e2f25fb57670e4d29e1bf3b48524354f 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 4.0E-24 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AL549_RS21760 e2f25fb57670e4d29e1bf3b48524354f 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.629 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AL549_RS21760 e2f25fb57670e4d29e1bf3b48524354f 85 Pfam PF01809 Haemolytic domain 11 75 1.8E-28 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AL549_RS21760 e2f25fb57670e4d29e1bf3b48524354f 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 13 82 1.1E-31 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AL549_RS21760 e2f25fb57670e4d29e1bf3b48524354f 85 SMART SM01234 8 75 2.9E-41 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AL549_RS23435 e026dfa7a13ad43c31d34c7aa5d207ca 95 Gene3D G3DSA:3.30.160.100 1 95 8.4E-34 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL549_RS23435 e026dfa7a13ad43c31d34c7aa5d207ca 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 3.3E-28 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL549_RS23435 e026dfa7a13ad43c31d34c7aa5d207ca 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 2.8E-33 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL549_RS23435 e026dfa7a13ad43c31d34c7aa5d207ca 95 SUPERFAMILY SSF69754 1 95 9.94E-35 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL549_RS17845 c23402643ff847d65ae6599032b9dda9 292 Pfam PF00557 Metallopeptidase family M24 12 271 4.9E-46 T 28-03-2018 IPR000994 Peptidase M24 AL549_RS17845 c23402643ff847d65ae6599032b9dda9 292 SUPERFAMILY SSF55920 3 280 6.41E-81 T 28-03-2018 IPR000994 Peptidase M24 AL549_RS17845 c23402643ff847d65ae6599032b9dda9 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 40.527 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL549_RS17845 c23402643ff847d65ae6599032b9dda9 292 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 279 2.5E-82 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL549_RS17845 c23402643ff847d65ae6599032b9dda9 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL549_RS17845 c23402643ff847d65ae6599032b9dda9 292 Gene3D G3DSA:3.90.230.10 2 292 4.4E-84 T 28-03-2018 AL549_RS01440 de72bf9eaeb8c95acc53d5ab4b7cbfc9 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 408 4.6E-23 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL549_RS01440 de72bf9eaeb8c95acc53d5ab4b7cbfc9 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 427 4.6E-23 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL549_RS01440 de72bf9eaeb8c95acc53d5ab4b7cbfc9 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 381 4.6E-23 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL549_RS01440 de72bf9eaeb8c95acc53d5ab4b7cbfc9 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 4.6E-23 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL549_RS01440 de72bf9eaeb8c95acc53d5ab4b7cbfc9 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 350 358 4.6E-23 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL549_RS01440 de72bf9eaeb8c95acc53d5ab4b7cbfc9 449 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 17 31 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AL549_RS01440 de72bf9eaeb8c95acc53d5ab4b7cbfc9 449 SUPERFAMILY SSF51445 16 441 6.35E-157 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS01440 de72bf9eaeb8c95acc53d5ab4b7cbfc9 449 TIGRFAM TIGR03356 BGL: beta-galactosidase 14 437 8.4E-188 T 28-03-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092 AL549_RS01440 de72bf9eaeb8c95acc53d5ab4b7cbfc9 449 Gene3D G3DSA:3.20.20.80 8 449 1.8E-160 T 28-03-2018 AL549_RS01440 de72bf9eaeb8c95acc53d5ab4b7cbfc9 449 Pfam PF00232 Glycosyl hydrolase family 1 15 440 1.0E-149 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL549_RS01440 de72bf9eaeb8c95acc53d5ab4b7cbfc9 449 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 350 358 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site AL549_RS18175 dadae26acf2d0214b0f2878708658f32 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.9E-12 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS18175 dadae26acf2d0214b0f2878708658f32 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.9E-12 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS18175 dadae26acf2d0214b0f2878708658f32 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL549_RS18175 dadae26acf2d0214b0f2878708658f32 255 SMART SM01134 72 234 4.0E-71 T 28-03-2018 AL549_RS18175 dadae26acf2d0214b0f2878708658f32 255 Gene3D G3DSA:3.40.50.1360 72 240 1.7E-41 T 28-03-2018 AL549_RS18175 dadae26acf2d0214b0f2878708658f32 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 5.2E-24 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS18175 dadae26acf2d0214b0f2878708658f32 255 Gene3D G3DSA:1.10.10.10 2 58 2.5E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS18175 dadae26acf2d0214b0f2878708658f32 255 SUPERFAMILY SSF46785 5 75 6.65E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS18175 dadae26acf2d0214b0f2878708658f32 255 SMART SM00420 6 58 4.1E-27 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS18175 dadae26acf2d0214b0f2878708658f32 255 Pfam PF00455 DeoR C terminal sensor domain 74 232 7.3E-54 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AL549_RS18175 dadae26acf2d0214b0f2878708658f32 255 SUPERFAMILY SSF100950 74 234 3.84E-30 T 28-03-2018 AL549_RS18135 435d50bd37ea7d96eeb4b6e152719854 1162 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1121 0.0 T 28-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AL549_RS18135 435d50bd37ea7d96eeb4b6e152719854 1162 SUPERFAMILY SSF52540 2 351 5.84E-122 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18135 435d50bd37ea7d96eeb4b6e152719854 1162 SUPERFAMILY SSF52980 843 1140 1.02E-73 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL549_RS18135 435d50bd37ea7d96eeb4b6e152719854 1162 Gene3D G3DSA:3.40.50.300 332 819 6.1E-69 T 28-03-2018 AL549_RS18135 435d50bd37ea7d96eeb4b6e152719854 1162 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 814 1.7E-298 T 28-03-2018 AL549_RS18135 435d50bd37ea7d96eeb4b6e152719854 1162 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1154 20.783 T 28-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AL549_RS18135 435d50bd37ea7d96eeb4b6e152719854 1162 Gene3D G3DSA:1.10.10.160 86 185 9.3E-33 T 28-03-2018 AL549_RS18135 435d50bd37ea7d96eeb4b6e152719854 1162 PIRSF PIRSF000980 1 1160 0.0 T 28-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AL549_RS18135 435d50bd37ea7d96eeb4b6e152719854 1162 SUPERFAMILY SSF52540 364 821 7.44E-102 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS15525 5188ab396ad1587782fe8e189ac20b4b 202 Gene3D G3DSA:3.40.50.880 13 202 2.2E-47 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS15525 5188ab396ad1587782fe8e189ac20b4b 202 SUPERFAMILY SSF52317 13 200 3.6E-48 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS15525 5188ab396ad1587782fe8e189ac20b4b 202 Pfam PF01965 DJ-1/PfpI family 15 181 8.0E-21 T 28-03-2018 IPR002818 DJ-1/PfpI AL549_RS01285 4715cbdc408b2002ced0dca0e88e2825 335 SUPERFAMILY SSF53822 61 333 2.16E-79 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS01285 4715cbdc408b2002ced0dca0e88e2825 335 SMART SM00354 1 71 5.4E-30 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS01285 4715cbdc408b2002ced0dca0e88e2825 335 Gene3D G3DSA:3.40.50.2300 174 303 3.0E-40 T 28-03-2018 AL549_RS01285 4715cbdc408b2002ced0dca0e88e2825 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.9E-16 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS01285 4715cbdc408b2002ced0dca0e88e2825 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 AL549_RS01285 4715cbdc408b2002ced0dca0e88e2825 335 Gene3D G3DSA:1.10.260.40 2 53 4.3E-20 T 28-03-2018 AL549_RS01285 4715cbdc408b2002ced0dca0e88e2825 335 Pfam PF13377 Periplasmic binding protein-like domain 168 330 1.6E-33 T 28-03-2018 AL549_RS01285 4715cbdc408b2002ced0dca0e88e2825 335 Gene3D G3DSA:3.40.50.2300 54 173 9.4E-29 T 28-03-2018 AL549_RS01285 4715cbdc408b2002ced0dca0e88e2825 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.5E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS01285 4715cbdc408b2002ced0dca0e88e2825 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.5E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS01285 4715cbdc408b2002ced0dca0e88e2825 335 SUPERFAMILY SSF47413 1 59 9.38E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS02025 c184642ef01f3ab8e6290aef4f76465f 558 Pfam PF13581 Histidine kinase-like ATPase domain 438 555 4.5E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS02025 c184642ef01f3ab8e6290aef4f76465f 558 SUPERFAMILY SSF52172 1 150 3.84E-31 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS02025 c184642ef01f3ab8e6290aef4f76465f 558 SUPERFAMILY SSF81606 180 376 2.01E-5 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL549_RS02025 c184642ef01f3ab8e6290aef4f76465f 558 Pfam PF00072 Response regulator receiver domain 3 115 1.4E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS02025 c184642ef01f3ab8e6290aef4f76465f 558 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 192 379 1.0E-39 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL549_RS02025 c184642ef01f3ab8e6290aef4f76465f 558 SMART SM00331 167 379 1.5E-17 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL549_RS02025 c184642ef01f3ab8e6290aef4f76465f 558 Gene3D G3DSA:3.40.50.2300 1 163 8.3E-31 T 28-03-2018 AL549_RS02025 c184642ef01f3ab8e6290aef4f76465f 558 Gene3D G3DSA:3.30.565.10 385 550 0.0029 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS02025 c184642ef01f3ab8e6290aef4f76465f 558 Gene3D G3DSA:3.60.40.10 164 384 4.0E-19 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL549_RS02025 c184642ef01f3ab8e6290aef4f76465f 558 SMART SM00448 1 115 5.0E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS19795 8aa45e15134a288527f64f621c9da909 161 Gene3D G3DSA:3.30.700.10 9 159 2.0E-12 T 28-03-2018 AL549_RS19795 8aa45e15134a288527f64f621c9da909 161 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 1.3E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS19795 8aa45e15134a288527f64f621c9da909 161 SUPERFAMILY SSF54523 9 134 1.73E-10 T 28-03-2018 AL549_RS19795 8aa45e15134a288527f64f621c9da909 161 PRINTS PR00813 Bacterial general secretion pathway protein G signature 43 61 2.4E-6 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AL549_RS19795 8aa45e15134a288527f64f621c9da909 161 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 2.4E-6 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AL549_RS19795 8aa45e15134a288527f64f621c9da909 161 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 2.8E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS09450 7201bd64ade4bc52e3fa7138a6958c7f 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 5.8E-22 T 28-03-2018 AL549_RS09450 7201bd64ade4bc52e3fa7138a6958c7f 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 5.8E-22 T 28-03-2018 AL549_RS09450 7201bd64ade4bc52e3fa7138a6958c7f 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 5.8E-22 T 28-03-2018 AL549_RS09450 7201bd64ade4bc52e3fa7138a6958c7f 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 5.8E-22 T 28-03-2018 AL549_RS09450 7201bd64ade4bc52e3fa7138a6958c7f 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 5.8E-22 T 28-03-2018 AL549_RS09450 7201bd64ade4bc52e3fa7138a6958c7f 440 SUPERFAMILY SSF51905 1 312 1.94E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS09450 7201bd64ade4bc52e3fa7138a6958c7f 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 4.1E-16 T 28-03-2018 AL549_RS09450 7201bd64ade4bc52e3fa7138a6958c7f 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 4.1E-16 T 28-03-2018 AL549_RS09450 7201bd64ade4bc52e3fa7138a6958c7f 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 4.1E-16 T 28-03-2018 AL549_RS09450 7201bd64ade4bc52e3fa7138a6958c7f 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 4.1E-16 T 28-03-2018 AL549_RS09450 7201bd64ade4bc52e3fa7138a6958c7f 440 Gene3D G3DSA:3.30.390.30 322 440 1.7E-24 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL549_RS09450 7201bd64ade4bc52e3fa7138a6958c7f 440 Gene3D G3DSA:3.50.50.60 1 103 1.3E-13 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS09450 7201bd64ade4bc52e3fa7138a6958c7f 440 Gene3D G3DSA:3.50.50.60 104 243 1.1E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS09450 7201bd64ade4bc52e3fa7138a6958c7f 440 SUPERFAMILY SSF55424 319 438 1.37E-31 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL549_RS09450 7201bd64ade4bc52e3fa7138a6958c7f 440 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 327 428 7.5E-17 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL549_RS09450 7201bd64ade4bc52e3fa7138a6958c7f 440 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1 303 7.4E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS09450 7201bd64ade4bc52e3fa7138a6958c7f 440 Gene3D G3DSA:3.50.50.60 244 315 1.5E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS16695 59377f7075b4e557406d48be4e22f9ba 691 SMART SM00491 539 671 1.1E-27 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL549_RS16695 59377f7075b4e557406d48be4e22f9ba 691 Pfam PF06733 DEAD_2 198 261 1.3E-4 T 28-03-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 AL549_RS16695 59377f7075b4e557406d48be4e22f9ba 691 Gene3D G3DSA:3.40.50.300 23 477 7.6E-21 T 28-03-2018 AL549_RS16695 59377f7075b4e557406d48be4e22f9ba 691 SUPERFAMILY SSF52540 630 667 3.15E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16695 59377f7075b4e557406d48be4e22f9ba 691 SUPERFAMILY SSF52540 207 267 3.15E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16695 59377f7075b4e557406d48be4e22f9ba 691 SUPERFAMILY SSF52540 16 123 3.15E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16695 59377f7075b4e557406d48be4e22f9ba 691 Pfam PF13307 Helicase C-terminal domain 525 684 2.7E-36 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL549_RS16695 59377f7075b4e557406d48be4e22f9ba 691 Gene3D G3DSA:3.40.50.300 501 682 1.2E-9 T 28-03-2018 AL549_RS16695 59377f7075b4e557406d48be4e22f9ba 691 SUPERFAMILY SSF52540 507 610 7.63E-6 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16695 59377f7075b4e557406d48be4e22f9ba 691 SUPERFAMILY SSF52540 641 666 7.63E-6 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS03230 37462a47c93210c8a86ede2e28cfd6a6 292 Pfam PF00892 EamA-like transporter family 145 270 5.4E-12 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS03230 37462a47c93210c8a86ede2e28cfd6a6 292 Pfam PF00892 EamA-like transporter family 9 139 5.6E-12 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS03230 37462a47c93210c8a86ede2e28cfd6a6 292 SUPERFAMILY SSF103481 180 280 2.75E-13 T 28-03-2018 AL549_RS03230 37462a47c93210c8a86ede2e28cfd6a6 292 SUPERFAMILY SSF103481 43 143 1.14E-14 T 28-03-2018 AL549_RS09345 32c81eb975716cbad88d853d04efb903 214 SUPERFAMILY SSF52540 1 202 1.6E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS09345 32c81eb975716cbad88d853d04efb903 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 9.0E-15 T 28-03-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AL549_RS09345 32c81eb975716cbad88d853d04efb903 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 9.6E-75 T 28-03-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AL549_RS09345 32c81eb975716cbad88d853d04efb903 214 Gene3D G3DSA:3.40.50.300 1 214 4.8E-66 T 28-03-2018 AL549_RS09345 32c81eb975716cbad88d853d04efb903 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.669 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL549_RS09345 32c81eb975716cbad88d853d04efb903 214 Pfam PF00406 Adenylate kinase 5 185 2.4E-59 T 28-03-2018 AL549_RS09345 32c81eb975716cbad88d853d04efb903 214 PRINTS PR00094 Adenylate kinase signature 4 17 1.7E-35 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL549_RS09345 32c81eb975716cbad88d853d04efb903 214 PRINTS PR00094 Adenylate kinase signature 32 46 1.7E-35 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL549_RS09345 32c81eb975716cbad88d853d04efb903 214 PRINTS PR00094 Adenylate kinase signature 156 171 1.7E-35 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL549_RS09345 32c81eb975716cbad88d853d04efb903 214 PRINTS PR00094 Adenylate kinase signature 173 187 1.7E-35 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL549_RS09345 32c81eb975716cbad88d853d04efb903 214 PRINTS PR00094 Adenylate kinase signature 81 97 1.7E-35 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL549_RS09345 32c81eb975716cbad88d853d04efb903 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 28-03-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL549_RS20905 225876598167280d0e4c6eab3062d158 196 Pfam PF04222 Protein of unknown function (DUF416) 6 193 1.2E-74 T 28-03-2018 IPR007338 Protein of unknown function DUF416 AL549_RS20905 225876598167280d0e4c6eab3062d158 196 Gene3D G3DSA:1.20.1590.10 5 195 7.3E-70 T 28-03-2018 IPR023381 YP001051499.1-like domain AL549_RS17150 c17fa26cf2079d7a7c2c57329bb078ed 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 37.638 T 28-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AL549_RS17150 c17fa26cf2079d7a7c2c57329bb078ed 181 Pfam PF00156 Phosphoribosyl transferase domain 30 145 1.4E-14 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL549_RS17150 c17fa26cf2079d7a7c2c57329bb078ed 181 Gene3D G3DSA:3.40.50.2020 2 180 1.2E-40 T 28-03-2018 AL549_RS17150 c17fa26cf2079d7a7c2c57329bb078ed 181 SUPERFAMILY SSF53271 11 178 1.1E-51 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AL549_RS17150 c17fa26cf2079d7a7c2c57329bb078ed 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 10 177 5.5E-72 T 28-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AL549_RS18795 6ba9509fdc87beb67a124c0ad82783ac 779 SUPERFAMILY SSF52151 45 118 7.06E-59 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL549_RS18795 6ba9509fdc87beb67a124c0ad82783ac 779 SUPERFAMILY SSF52151 148 334 7.06E-59 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL549_RS18795 6ba9509fdc87beb67a124c0ad82783ac 779 Pfam PF01734 Patatin-like phospholipase 52 242 5.6E-30 T 28-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AL549_RS18795 6ba9509fdc87beb67a124c0ad82783ac 779 Gene3D G3DSA:2.40.160.50 393 778 3.0E-21 T 28-03-2018 AL549_RS18795 6ba9509fdc87beb67a124c0ad82783ac 779 Pfam PF01103 Surface antigen 470 762 9.1E-5 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AL549_RS18795 6ba9509fdc87beb67a124c0ad82783ac 779 Pfam PF07244 Surface antigen variable number repeat 362 432 6.8E-6 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL549_RS18795 6ba9509fdc87beb67a124c0ad82783ac 779 Gene3D G3DSA:3.40.1090.10 33 362 4.3E-48 T 28-03-2018 AL549_RS23425 380b35f0e8e6f1f6a73a39020ac8a8b6 287 PIRSF PIRSF005052 1 286 7.4E-107 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 AL549_RS23425 380b35f0e8e6f1f6a73a39020ac8a8b6 287 Pfam PF03668 P-loop ATPase protein family 1 284 2.9E-110 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 AL549_RS23425 380b35f0e8e6f1f6a73a39020ac8a8b6 287 SUPERFAMILY SSF52540 1 156 1.46E-10 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS23425 380b35f0e8e6f1f6a73a39020ac8a8b6 287 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 39.506 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 AL549_RS23425 380b35f0e8e6f1f6a73a39020ac8a8b6 287 Gene3D G3DSA:3.40.50.300 1 155 9.1E-10 T 28-03-2018 AL549_RS18735 7cbf5a047f2f440de608687d31d5b136 801 Gene3D G3DSA:1.50.10.10 311 694 3.6E-70 T 28-03-2018 AL549_RS18735 7cbf5a047f2f440de608687d31d5b136 801 SUPERFAMILY SSF74650 1 269 1.48E-79 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AL549_RS18735 7cbf5a047f2f440de608687d31d5b136 801 SUPERFAMILY SSF48208 273 800 3.57E-110 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL549_RS18735 7cbf5a047f2f440de608687d31d5b136 801 Pfam PF06165 Glycosyltransferase family 36 21 267 7.0E-84 T 28-03-2018 IPR010383 Glycosyl hydrolase 94 AL549_RS18735 7cbf5a047f2f440de608687d31d5b136 801 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 1.6E-208 T 28-03-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain AL549_RS18735 7cbf5a047f2f440de608687d31d5b136 801 Gene3D G3DSA:1.20.890.20 272 301 0.0018 T 28-03-2018 AL549_RS18735 7cbf5a047f2f440de608687d31d5b136 801 Gene3D G3DSA:2.60.420.10 718 801 6.7E-26 T 28-03-2018 AL549_RS18735 7cbf5a047f2f440de608687d31d5b136 801 Gene3D G3DSA:2.70.98.40 1 271 5.0E-85 T 28-03-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 AL549_RS18735 7cbf5a047f2f440de608687d31d5b136 801 SMART SM01068 1 63 9.9E-19 T 28-03-2018 IPR009342 Putative carbohydrate binding domain AL549_RS06510 b0b3aa4353ea4f4698e43956eeb62a56 265 SUPERFAMILY SSF53474 12 249 2.85E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS06510 b0b3aa4353ea4f4698e43956eeb62a56 265 Gene3D G3DSA:3.40.50.1820 3 238 4.9E-40 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS06510 b0b3aa4353ea4f4698e43956eeb62a56 265 Pfam PF01764 Lipase (class 3) 63 207 3.8E-27 T 28-03-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 AL549_RS07165 557d22a83d9843e7a931841855bfebb4 203 Gene3D G3DSA:2.60.120.590 15 202 1.7E-54 T 28-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AL549_RS07165 557d22a83d9843e7a931841855bfebb4 203 SUPERFAMILY SSF51197 13 200 7.32E-69 T 28-03-2018 AL549_RS07165 557d22a83d9843e7a931841855bfebb4 203 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 21 196 5.4E-32 T 28-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AL549_RS21850 196dd49a49a4ef488a888dbaedb4cc5d 453 Pfam PF12804 MobA-like NTP transferase domain 5 122 1.3E-22 T 28-03-2018 IPR025877 MobA-like NTP transferase AL549_RS21850 196dd49a49a4ef488a888dbaedb4cc5d 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL549_RS21850 196dd49a49a4ef488a888dbaedb4cc5d 453 Gene3D G3DSA:2.160.10.10 242 307 7.1E-16 T 28-03-2018 AL549_RS21850 196dd49a49a4ef488a888dbaedb4cc5d 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.602 T 28-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 AL549_RS21850 196dd49a49a4ef488a888dbaedb4cc5d 453 Gene3D G3DSA:2.160.10.10 308 436 3.0E-34 T 28-03-2018 AL549_RS21850 196dd49a49a4ef488a888dbaedb4cc5d 453 Gene3D G3DSA:3.90.550.10 1 241 8.9E-52 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS21850 196dd49a49a4ef488a888dbaedb4cc5d 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 2.6E-204 T 28-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 AL549_RS21850 196dd49a49a4ef488a888dbaedb4cc5d 453 SUPERFAMILY SSF53448 1 249 8.76E-64 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS21850 196dd49a49a4ef488a888dbaedb4cc5d 453 SUPERFAMILY SSF51161 252 434 1.22E-50 T 28-03-2018 IPR011004 Trimeric LpxA-like AL549_RS21850 196dd49a49a4ef488a888dbaedb4cc5d 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 268 296 4.9E-5 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS21850 196dd49a49a4ef488a888dbaedb4cc5d 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 7.2E-6 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS21850 196dd49a49a4ef488a888dbaedb4cc5d 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 8.9E-4 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS21430 c8260b93d6fa922e60c41c6f67aaea88 165 SUPERFAMILY SSF51261 47 129 2.09E-8 T 28-03-2018 IPR011055 Duplicated hybrid motif AL549_RS21430 c8260b93d6fa922e60c41c6f67aaea88 165 Gene3D G3DSA:2.70.70.10 34 86 5.3E-4 T 28-03-2018 AL549_RS21430 c8260b93d6fa922e60c41c6f67aaea88 165 Gene3D G3DSA:2.70.70.10 87 165 6.3E-7 T 28-03-2018 AL549_RS19180 ecb8c4deb8bd6220cf2c0c9068cdc0b9 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 3.7E-42 T 28-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AL549_RS19180 ecb8c4deb8bd6220cf2c0c9068cdc0b9 126 Gene3D G3DSA:3.90.470.20 1 126 6.4E-39 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL549_RS19180 ecb8c4deb8bd6220cf2c0c9068cdc0b9 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 125 3.3E-33 T 28-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AL549_RS19180 ecb8c4deb8bd6220cf2c0c9068cdc0b9 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 88 2.0E-40 T 28-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AL549_RS19180 ecb8c4deb8bd6220cf2c0c9068cdc0b9 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.143 T 28-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AL549_RS19180 ecb8c4deb8bd6220cf2c0c9068cdc0b9 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 3.8E-22 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL549_RS19180 ecb8c4deb8bd6220cf2c0c9068cdc0b9 126 SUPERFAMILY SSF56214 3 125 7.06E-31 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL549_RS10895 afd50285b0c4b7020988452c5efd0e77 445 SUPERFAMILY SSF53098 94 390 1.21E-24 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS10895 afd50285b0c4b7020988452c5efd0e77 445 Pfam PF13006 Insertion element 4 transposase N-terminal 20 112 9.7E-29 T 28-03-2018 IPR024473 Transposase, IS4, N-terminal AL549_RS10895 afd50285b0c4b7020988452c5efd0e77 445 Gene3D G3DSA:3.90.350.10 192 336 4.0E-14 T 28-03-2018 IPR014736 Transposase, Tn5-like, core AL549_RS10895 afd50285b0c4b7020988452c5efd0e77 445 Pfam PF01609 Transposase DDE domain 129 356 9.3E-26 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL549_RS10945 afd50285b0c4b7020988452c5efd0e77 445 SUPERFAMILY SSF53098 94 390 1.21E-24 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS10945 afd50285b0c4b7020988452c5efd0e77 445 Pfam PF13006 Insertion element 4 transposase N-terminal 20 112 9.7E-29 T 28-03-2018 IPR024473 Transposase, IS4, N-terminal AL549_RS10945 afd50285b0c4b7020988452c5efd0e77 445 Gene3D G3DSA:3.90.350.10 192 336 4.0E-14 T 28-03-2018 IPR014736 Transposase, Tn5-like, core AL549_RS10945 afd50285b0c4b7020988452c5efd0e77 445 Pfam PF01609 Transposase DDE domain 129 356 9.3E-26 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL549_RS04875 6401f2ed51ff36dcfec5862a6c163df5 467 Pfam PF13437 HlyD family secretion protein 319 434 1.7E-19 T 28-03-2018 AL549_RS04875 6401f2ed51ff36dcfec5862a6c163df5 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 364 388 1.3E-55 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS04875 6401f2ed51ff36dcfec5862a6c163df5 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 104 124 1.3E-55 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS04875 6401f2ed51ff36dcfec5862a6c163df5 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 62 85 1.3E-55 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS04875 6401f2ed51ff36dcfec5862a6c163df5 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 388 411 1.3E-55 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS04875 6401f2ed51ff36dcfec5862a6c163df5 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 431 446 1.3E-55 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS04875 6401f2ed51ff36dcfec5862a6c163df5 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 331 352 1.3E-55 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS04875 6401f2ed51ff36dcfec5862a6c163df5 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 446 466 1.3E-55 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS04875 6401f2ed51ff36dcfec5862a6c163df5 467 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 51 467 6.9E-135 T 28-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AL549_RS04875 6401f2ed51ff36dcfec5862a6c163df5 467 Gene3D G3DSA:2.40.50.100 90 355 2.3E-15 T 28-03-2018 AL549_RS17255 2d2cc416a4ad2bbf55744bb3d5c85a91 176 Pfam PF01713 Smr domain 97 171 1.2E-17 T 28-03-2018 IPR002625 Smr domain AL549_RS17255 2d2cc416a4ad2bbf55744bb3d5c85a91 176 SMART SM00463 94 172 7.9E-16 T 28-03-2018 IPR002625 Smr domain AL549_RS17255 2d2cc416a4ad2bbf55744bb3d5c85a91 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 40.034 T 28-03-2018 IPR022990 Uncharacterised protein family UPF0115 AL549_RS17255 2d2cc416a4ad2bbf55744bb3d5c85a91 176 SUPERFAMILY SSF160443 95 171 1.83E-11 T 28-03-2018 IPR002625 Smr domain AL549_RS15445 400edb7f8ba47d6e6207b9f56df99305 258 SUPERFAMILY SSF81301 64 221 1.8E-16 T 28-03-2018 AL549_RS15445 400edb7f8ba47d6e6207b9f56df99305 258 Gene3D G3DSA:3.30.460.10 70 191 4.2E-9 T 28-03-2018 AL549_RS15445 400edb7f8ba47d6e6207b9f56df99305 258 SMART SM00954 103 211 0.0083 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 AL549_RS23240 2c0e7dac255f2aacd460d6fb3c02319c 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23240 2c0e7dac255f2aacd460d6fb3c02319c 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.798 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23240 2c0e7dac255f2aacd460d6fb3c02319c 127 Gene3D G3DSA:3.90.1030.10 1 117 3.9E-50 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23240 2c0e7dac255f2aacd460d6fb3c02319c 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.7E-49 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23240 2c0e7dac255f2aacd460d6fb3c02319c 127 SUPERFAMILY SSF64263 1 119 5.49E-51 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23240 2c0e7dac255f2aacd460d6fb3c02319c 127 Pfam PF01196 Ribosomal protein L17 20 116 1.1E-34 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS00985 eda429a10706f75f66f695e15cfc390b 371 Pfam PF01103 Surface antigen 89 294 6.2E-8 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AL549_RS00985 eda429a10706f75f66f695e15cfc390b 371 Gene3D G3DSA:2.40.160.50 75 371 2.5E-34 T 28-03-2018 AL549_RS20505 60bbcf895d10f7a6e57e9336120cafd3 664 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 28-03-2018 IPR014762 DNA mismatch repair, conserved site AL549_RS20505 60bbcf895d10f7a6e57e9336120cafd3 664 SMART SM00853 483 625 2.6E-18 T 28-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AL549_RS20505 60bbcf895d10f7a6e57e9336120cafd3 664 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 1.6E-39 T 28-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AL549_RS20505 60bbcf895d10f7a6e57e9336120cafd3 664 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 120 1.8E-11 T 28-03-2018 AL549_RS20505 60bbcf895d10f7a6e57e9336120cafd3 664 SUPERFAMILY SSF55874 1 204 6.68E-53 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS20505 60bbcf895d10f7a6e57e9336120cafd3 664 SUPERFAMILY SSF54211 191 330 8.34E-37 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS20505 60bbcf895d10f7a6e57e9336120cafd3 664 SMART SM01340 212 330 1.7E-57 T 28-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AL549_RS20505 60bbcf895d10f7a6e57e9336120cafd3 664 Pfam PF08676 MutL C terminal dimerisation domain 480 619 1.5E-30 T 28-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AL549_RS20505 60bbcf895d10f7a6e57e9336120cafd3 664 SUPERFAMILY SSF118116 479 662 1.44E-37 T 28-03-2018 AL549_RS20505 60bbcf895d10f7a6e57e9336120cafd3 664 Gene3D G3DSA:3.30.230.10 217 329 1.8E-32 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL549_RS20505 60bbcf895d10f7a6e57e9336120cafd3 664 Gene3D G3DSA:3.30.565.10 1 216 4.9E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS20505 60bbcf895d10f7a6e57e9336120cafd3 664 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 663 25.376 T 28-03-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AL549_RS20505 60bbcf895d10f7a6e57e9336120cafd3 664 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 6.6E-101 T 28-03-2018 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 AL549_RS10000 1ab42626d01af3bef875476f85dce974 361 SUPERFAMILY SSF53686 23 335 5.5E-70 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL549_RS10000 1ab42626d01af3bef875476f85dce974 361 Gene3D G3DSA:3.40.50.1100 34 140 9.5E-24 T 28-03-2018 AL549_RS10000 1ab42626d01af3bef875476f85dce974 361 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 32 316 3.4E-40 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL549_RS10000 1ab42626d01af3bef875476f85dce974 361 Gene3D G3DSA:3.40.50.1100 141 331 3.6E-37 T 28-03-2018 AL549_RS20895 cb962fcecd337369870c2eec928d65ee 90 SMART SM00411 1 90 3.7E-46 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS20895 cb962fcecd337369870c2eec928d65ee 90 Gene3D G3DSA:4.10.520.10 1 90 1.8E-34 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL549_RS20895 cb962fcecd337369870c2eec928d65ee 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.7E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS20895 cb962fcecd337369870c2eec928d65ee 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.7E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS20895 cb962fcecd337369870c2eec928d65ee 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.7E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS20895 cb962fcecd337369870c2eec928d65ee 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-33 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS20895 cb962fcecd337369870c2eec928d65ee 90 SUPERFAMILY SSF47729 1 90 2.06E-33 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL549_RS20895 cb962fcecd337369870c2eec928d65ee 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AL549_RS07975 0d3c2cb24e3f6341cca2e28a4a0ceb8a 555 Gene3D G3DSA:3.40.50.300 8 289 1.0E-57 T 28-03-2018 AL549_RS07975 0d3c2cb24e3f6341cca2e28a4a0ceb8a 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS07975 0d3c2cb24e3f6341cca2e28a4a0ceb8a 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 5.7E-292 T 28-03-2018 IPR022374 ABC transporter, ATP-binding protein, ChvD AL549_RS07975 0d3c2cb24e3f6341cca2e28a4a0ceb8a 555 Gene3D G3DSA:3.40.50.300 290 547 2.5E-57 T 28-03-2018 AL549_RS07975 0d3c2cb24e3f6341cca2e28a4a0ceb8a 555 Pfam PF12848 ABC transporter 230 306 4.1E-13 T 28-03-2018 IPR032781 ABC-transporter extension domain AL549_RS07975 0d3c2cb24e3f6341cca2e28a4a0ceb8a 555 SUPERFAMILY SSF52540 303 525 1.5E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS07975 0d3c2cb24e3f6341cca2e28a4a0ceb8a 555 SUPERFAMILY SSF52540 9 243 4.46E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS07975 0d3c2cb24e3f6341cca2e28a4a0ceb8a 555 SMART SM00382 31 236 5.1E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS07975 0d3c2cb24e3f6341cca2e28a4a0ceb8a 555 SMART SM00382 348 518 1.6E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS07975 0d3c2cb24e3f6341cca2e28a4a0ceb8a 555 Pfam PF00005 ABC transporter 340 473 1.5E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS07975 0d3c2cb24e3f6341cca2e28a4a0ceb8a 555 Pfam PF00005 ABC transporter 22 191 8.6E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS16130 147742d2710f5769c0228ab22310a6e3 161 Pfam PF01047 MarR family 31 89 1.7E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS16130 147742d2710f5769c0228ab22310a6e3 161 SMART SM00347 24 124 1.6E-18 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS16130 147742d2710f5769c0228ab22310a6e3 161 SUPERFAMILY SSF46785 5 140 9.71E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS16130 147742d2710f5769c0228ab22310a6e3 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 5.0E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS16130 147742d2710f5769c0228ab22310a6e3 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 5.0E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS16130 147742d2710f5769c0228ab22310a6e3 161 Gene3D G3DSA:1.10.10.10 1 145 1.4E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS07550 82782ba66cf28d05cf89daf0e50b54d8 486 SUPERFAMILY SSF51984 16 109 4.45E-29 T 28-03-2018 AL549_RS07550 82782ba66cf28d05cf89daf0e50b54d8 486 Pfam PF08245 Mur ligase middle domain 127 307 1.4E-29 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL549_RS07550 82782ba66cf28d05cf89daf0e50b54d8 486 Gene3D G3DSA:3.40.50.720 4 110 8.3E-20 T 28-03-2018 AL549_RS07550 82782ba66cf28d05cf89daf0e50b54d8 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.162 T 28-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS07550 82782ba66cf28d05cf89daf0e50b54d8 486 Gene3D G3DSA:3.90.190.20 328 478 1.2E-36 T 28-03-2018 AL549_RS07550 82782ba66cf28d05cf89daf0e50b54d8 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 4.3E-187 T 28-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL549_RS07550 82782ba66cf28d05cf89daf0e50b54d8 486 Pfam PF01225 Mur ligase family, catalytic domain 25 121 4.7E-29 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL549_RS07550 82782ba66cf28d05cf89daf0e50b54d8 486 SUPERFAMILY SSF53623 108 321 5.23E-72 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL549_RS07550 82782ba66cf28d05cf89daf0e50b54d8 486 SUPERFAMILY SSF53244 326 474 4.58E-49 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL549_RS07550 82782ba66cf28d05cf89daf0e50b54d8 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 328 417 8.5E-23 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL549_RS07550 82782ba66cf28d05cf89daf0e50b54d8 486 Gene3D G3DSA:3.40.1190.10 111 327 1.4E-51 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL549_RS14755 2df3a3bfeb59e1dca0e55e824251e048 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 2.4E-10 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS04680 a8c7d7edc59b596e138d462a98895164 198 Pfam PF00691 OmpA family 94 188 7.0E-17 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS04680 a8c7d7edc59b596e138d462a98895164 198 Gene3D G3DSA:3.30.1330.60 50 198 2.2E-32 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS04680 a8c7d7edc59b596e138d462a98895164 198 ProSitePatterns PS01068 OmpA-like domain. 126 170 - T 28-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AL549_RS04680 a8c7d7edc59b596e138d462a98895164 198 PRINTS PR01021 OMPA domain signature 139 155 5.1E-7 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS04680 a8c7d7edc59b596e138d462a98895164 198 PRINTS PR01021 OMPA domain signature 124 139 5.1E-7 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS04680 a8c7d7edc59b596e138d462a98895164 198 SUPERFAMILY SSF103088 81 194 2.09E-31 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS02000 0126dab6c102840a69b86822b17e11ca 284 PIRSF PIRSF000410 4 284 8.4E-97 T 28-03-2018 IPR026024 Chemotaxis protein methyltransferase CheR AL549_RS02000 0126dab6c102840a69b86822b17e11ca 284 Pfam PF03705 CheR methyltransferase, all-alpha domain 22 73 7.5E-14 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL549_RS02000 0126dab6c102840a69b86822b17e11ca 284 SUPERFAMILY SSF53335 87 283 8.25E-53 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS02000 0126dab6c102840a69b86822b17e11ca 284 SUPERFAMILY SSF47757 11 86 4.84E-19 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL549_RS02000 0126dab6c102840a69b86822b17e11ca 284 Gene3D G3DSA:3.40.50.150 86 284 2.3E-47 T 28-03-2018 AL549_RS02000 0126dab6c102840a69b86822b17e11ca 284 PRINTS PR00996 Glutamate methyltransferase family signature 224 238 1.2E-43 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS02000 0126dab6c102840a69b86822b17e11ca 284 PRINTS PR00996 Glutamate methyltransferase family signature 80 92 1.2E-43 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS02000 0126dab6c102840a69b86822b17e11ca 284 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 1.2E-43 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS02000 0126dab6c102840a69b86822b17e11ca 284 PRINTS PR00996 Glutamate methyltransferase family signature 153 169 1.2E-43 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS02000 0126dab6c102840a69b86822b17e11ca 284 PRINTS PR00996 Glutamate methyltransferase family signature 243 266 1.2E-43 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS02000 0126dab6c102840a69b86822b17e11ca 284 PRINTS PR00996 Glutamate methyltransferase family signature 43 56 1.2E-43 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS02000 0126dab6c102840a69b86822b17e11ca 284 Pfam PF01739 CheR methyltransferase, SAM binding domain 87 281 1.5E-58 T 28-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AL549_RS02000 0126dab6c102840a69b86822b17e11ca 284 SMART SM00138 21 284 4.4E-81 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS02000 0126dab6c102840a69b86822b17e11ca 284 Gene3D G3DSA:1.10.155.10 13 85 1.2E-18 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL549_RS19835 691a4351a76217ffa7fb03db32dec940 548 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 238 524 7.8E-91 T 28-03-2018 IPR013358 Pilus biogenesis, MshL AL549_RS19835 691a4351a76217ffa7fb03db32dec940 548 Pfam PF00263 Bacterial type II and III secretion system protein 347 524 7.4E-41 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 AL549_RS19835 691a4351a76217ffa7fb03db32dec940 548 PRINTS PR00811 Bacterial general secretion pathway protein D signature 489 507 6.6E-18 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS19835 691a4351a76217ffa7fb03db32dec940 548 PRINTS PR00811 Bacterial general secretion pathway protein D signature 512 526 6.6E-18 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS19835 691a4351a76217ffa7fb03db32dec940 548 PRINTS PR00811 Bacterial general secretion pathway protein D signature 272 282 6.6E-18 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS19835 691a4351a76217ffa7fb03db32dec940 548 PRINTS PR00811 Bacterial general secretion pathway protein D signature 342 366 6.6E-18 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS19835 691a4351a76217ffa7fb03db32dec940 548 SMART SM00965 93 141 1.9E-5 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL549_RS19835 691a4351a76217ffa7fb03db32dec940 548 Pfam PF07655 Secretin N-terminal domain 145 243 5.4E-25 T 28-03-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 AL549_RS11970 5f1c1b7b75740bb1132ecb94589aae6a 298 SUPERFAMILY SSF51621 5 294 2.11E-96 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL549_RS11970 5f1c1b7b75740bb1132ecb94589aae6a 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 2.6E-127 T 28-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AL549_RS11970 5f1c1b7b75740bb1132ecb94589aae6a 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.791 T 28-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AL549_RS11970 5f1c1b7b75740bb1132ecb94589aae6a 298 Gene3D G3DSA:3.20.20.60 3 298 7.9E-84 T 28-03-2018 AL549_RS11970 5f1c1b7b75740bb1132ecb94589aae6a 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 28-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 AL549_RS11970 5f1c1b7b75740bb1132ecb94589aae6a 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 15 258 1.5E-45 T 28-03-2018 AL549_RS12280 696b054b01c0411426bff5aad6634403 397 Pfam PF13439 Glycosyltransferase Family 4 18 172 2.6E-12 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL549_RS12280 696b054b01c0411426bff5aad6634403 397 SUPERFAMILY SSF53756 7 366 9.77E-65 T 28-03-2018 AL549_RS12280 696b054b01c0411426bff5aad6634403 397 Gene3D G3DSA:3.40.50.2000 1 180 3.6E-12 T 28-03-2018 AL549_RS12280 696b054b01c0411426bff5aad6634403 397 Gene3D G3DSA:3.40.50.2000 181 352 9.0E-39 T 28-03-2018 AL549_RS12280 696b054b01c0411426bff5aad6634403 397 Pfam PF00534 Glycosyl transferases group 1 186 346 3.2E-35 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL549_RS04825 66e299a25f759bd7c5f2bacf43bac29f 497 SUPERFAMILY SSF53720 2 484 5.89E-144 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL549_RS04825 66e299a25f759bd7c5f2bacf43bac29f 497 Gene3D G3DSA:3.40.605.10 1 263 5.7E-90 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL549_RS04825 66e299a25f759bd7c5f2bacf43bac29f 497 Gene3D G3DSA:3.40.309.10 264 459 1.6E-57 T 28-03-2018 AL549_RS04825 66e299a25f759bd7c5f2bacf43bac29f 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL549_RS04825 66e299a25f759bd7c5f2bacf43bac29f 497 Pfam PF00171 Aldehyde dehydrogenase family 13 477 1.2E-137 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL549_RS04825 66e299a25f759bd7c5f2bacf43bac29f 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 481 3.0E-241 T 28-03-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 AL549_RS03925 9ef0ba7f6a7e9c6c35e28c9912c57598 418 SUPERFAMILY SSF52540 1 417 9.14E-121 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS03925 9ef0ba7f6a7e9c6c35e28c9912c57598 418 Gene3D G3DSA:3.90.170.10 266 418 2.0E-49 T 28-03-2018 AL549_RS03925 9ef0ba7f6a7e9c6c35e28c9912c57598 418 Pfam PF00709 Adenylosuccinate synthetase 4 416 1.3E-131 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL549_RS03925 9ef0ba7f6a7e9c6c35e28c9912c57598 418 Gene3D G3DSA:3.40.440.10 1 157 2.5E-42 T 28-03-2018 AL549_RS03925 9ef0ba7f6a7e9c6c35e28c9912c57598 418 Gene3D G3DSA:3.40.440.10 171 265 4.1E-7 T 28-03-2018 AL549_RS03925 9ef0ba7f6a7e9c6c35e28c9912c57598 418 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 418 141.823 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL549_RS03925 9ef0ba7f6a7e9c6c35e28c9912c57598 418 SMART SM00788 3 417 5.3E-177 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL549_RS21890 6d42fea9643003966f3309a3df30b8a9 94 SUPERFAMILY SSF55021 3 76 1.33E-10 T 28-03-2018 AL549_RS21890 6d42fea9643003966f3309a3df30b8a9 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 70 9.0E-4 T 28-03-2018 AL549_RS21890 6d42fea9643003966f3309a3df30b8a9 94 Pfam PF13710 ACT domain 12 73 7.4E-21 T 28-03-2018 AL549_RS21890 6d42fea9643003966f3309a3df30b8a9 94 Gene3D G3DSA:3.30.70.260 1 79 2.3E-8 T 28-03-2018 AL549_RS19790 d76b3ffc4e4200f8e36c53100e536546 188 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 4.2E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS19790 d76b3ffc4e4200f8e36c53100e536546 188 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS19790 d76b3ffc4e4200f8e36c53100e536546 188 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.2E-5 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS11600 65ed77a322b0ed3bc7413ba6ba0e16fa 595 Gene3D G3DSA:1.20.1560.10 2 333 1.9E-44 T 28-03-2018 AL549_RS11600 65ed77a322b0ed3bc7413ba6ba0e16fa 595 SUPERFAMILY SSF52540 350 579 1.15E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11600 65ed77a322b0ed3bc7413ba6ba0e16fa 595 Pfam PF00005 ABC transporter 368 512 2.5E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS11600 65ed77a322b0ed3bc7413ba6ba0e16fa 595 Gene3D G3DSA:3.40.50.300 334 588 1.2E-58 T 28-03-2018 AL549_RS11600 65ed77a322b0ed3bc7413ba6ba0e16fa 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 2.2E-175 T 28-03-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 AL549_RS11600 65ed77a322b0ed3bc7413ba6ba0e16fa 595 SMART SM00382 375 566 3.2E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS11600 65ed77a322b0ed3bc7413ba6ba0e16fa 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS11600 65ed77a322b0ed3bc7413ba6ba0e16fa 595 SUPERFAMILY SSF90123 12 330 2.35E-55 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS11600 65ed77a322b0ed3bc7413ba6ba0e16fa 595 Pfam PF00664 ABC transporter transmembrane region 25 292 1.6E-42 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS16475 fc5c73e71a2f45f880a326d883730dcf 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.7E-177 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL549_RS16475 fc5c73e71a2f45f880a326d883730dcf 528 PIRSF PIRSF006446 349 526 2.8E-32 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL549_RS16475 fc5c73e71a2f45f880a326d883730dcf 528 PIRSF PIRSF006446 1 330 1.2E-115 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL549_RS08665 ff443e5b66f678da30474521411d4d65 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site AL549_RS08665 ff443e5b66f678da30474521411d4d65 294 Gene3D G3DSA:1.10.600.10 2 294 1.9E-85 T 28-03-2018 IPR008949 Isoprenoid synthase domain AL549_RS08665 ff443e5b66f678da30474521411d4d65 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site AL549_RS08665 ff443e5b66f678da30474521411d4d65 294 Pfam PF00348 Polyprenyl synthetase 28 270 1.6E-59 T 28-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 AL549_RS08665 ff443e5b66f678da30474521411d4d65 294 SUPERFAMILY SSF48576 2 287 2.4E-87 T 28-03-2018 IPR008949 Isoprenoid synthase domain AL549_RS09805 8b3b73422258329cea2882a0a4e149be 371 SUPERFAMILY SSF50331 238 368 5.83E-23 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL549_RS09805 8b3b73422258329cea2882a0a4e149be 371 SMART SM00382 30 214 1.8E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS09805 8b3b73422258329cea2882a0a4e149be 371 Gene3D G3DSA:2.40.50.100 242 298 1.5E-9 T 28-03-2018 AL549_RS09805 8b3b73422258329cea2882a0a4e149be 371 Pfam PF00005 ABC transporter 21 163 1.1E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS09805 8b3b73422258329cea2882a0a4e149be 371 Gene3D G3DSA:3.40.50.300 1 241 8.6E-78 T 28-03-2018 AL549_RS09805 8b3b73422258329cea2882a0a4e149be 371 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS09805 8b3b73422258329cea2882a0a4e149be 371 Gene3D G3DSA:2.40.50.140 299 353 9.8E-10 T 28-03-2018 AL549_RS09805 8b3b73422258329cea2882a0a4e149be 371 SUPERFAMILY SSF52540 4 245 5.9E-87 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS21560 8edb2c4a56f2bbc35f48457f20038a27 672 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 28-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AL549_RS21560 8edb2c4a56f2bbc35f48457f20038a27 672 Gene3D G3DSA:3.40.50.300 1 134 1.2E-23 T 28-03-2018 AL549_RS21560 8edb2c4a56f2bbc35f48457f20038a27 672 Gene3D G3DSA:3.40.50.300 135 275 1.6E-28 T 28-03-2018 AL549_RS21560 8edb2c4a56f2bbc35f48457f20038a27 672 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 3.9E-77 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL549_RS21560 8edb2c4a56f2bbc35f48457f20038a27 672 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.783 T 28-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AL549_RS21560 8edb2c4a56f2bbc35f48457f20038a27 672 SUPERFAMILY SSF52540 1 640 5.8E-163 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS21560 8edb2c4a56f2bbc35f48457f20038a27 672 Gene3D G3DSA:3.40.50.300 276 376 9.4E-22 T 28-03-2018 AL549_RS21560 8edb2c4a56f2bbc35f48457f20038a27 672 Gene3D G3DSA:1.10.486.10 377 553 1.4E-40 T 28-03-2018 AL549_RS21560 8edb2c4a56f2bbc35f48457f20038a27 672 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 1.6E-73 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL549_RS00300 b108fc42d81da560dae6e7e63b7c284f 317 Pfam PF08349 Protein of unknown function (DUF1722) 192 308 6.3E-43 T 28-03-2018 IPR013560 Domain of unknown function DUF1722 AL549_RS00300 b108fc42d81da560dae6e7e63b7c284f 317 Pfam PF04463 Protein of unknown function (DUF523) 8 149 1.3E-37 T 28-03-2018 IPR007553 Domain of unknown function DUF523 AL549_RS00300 b108fc42d81da560dae6e7e63b7c284f 317 PIRSF PIRSF037004 1 317 5.6E-140 T 28-03-2018 IPR017087 Uncharacterised conserved protein UCP037004 AL549_RS08680 f51a34e703d3cd6150b489732e0ac5b5 318 SUPERFAMILY SSF103088 183 300 8.76E-31 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS08680 f51a34e703d3cd6150b489732e0ac5b5 318 Gene3D G3DSA:3.30.1330.60 133 318 7.7E-40 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS08680 f51a34e703d3cd6150b489732e0ac5b5 318 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 58 2.8E-17 T 28-03-2018 IPR025713 Motility protein B, N-terminal domain AL549_RS08680 f51a34e703d3cd6150b489732e0ac5b5 318 Pfam PF00691 OmpA family 196 294 1.3E-18 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS16260 3126d14f67ca2e9ccac2972a59083852 822 SUPERFAMILY SSF141868 422 666 8.76E-65 T 28-03-2018 IPR001633 EAL domain AL549_RS16260 3126d14f67ca2e9ccac2972a59083852 822 SMART SM00091 127 193 2.1E-5 T 28-03-2018 IPR000014 PAS domain AL549_RS16260 3126d14f67ca2e9ccac2972a59083852 822 Gene3D G3DSA:3.30.450.20 123 262 8.0E-12 T 28-03-2018 AL549_RS16260 3126d14f67ca2e9ccac2972a59083852 822 SUPERFAMILY SSF55785 126 235 1.24E-14 T 28-03-2018 IPR000014 PAS domain AL549_RS16260 3126d14f67ca2e9ccac2972a59083852 822 Gene3D G3DSA:3.30.70.270 263 411 2.2E-10 T 28-03-2018 AL549_RS16260 3126d14f67ca2e9ccac2972a59083852 822 SMART SM00052 415 662 5.7E-60 T 28-03-2018 IPR001633 EAL domain AL549_RS16260 3126d14f67ca2e9ccac2972a59083852 822 SUPERFAMILY SSF55073 254 406 3.61E-5 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS16260 3126d14f67ca2e9ccac2972a59083852 822 Pfam PF00563 EAL domain 424 657 2.6E-56 T 28-03-2018 IPR001633 EAL domain AL549_RS16260 3126d14f67ca2e9ccac2972a59083852 822 Gene3D G3DSA:3.20.20.450 412 666 1.7E-69 T 28-03-2018 IPR001633 EAL domain AL549_RS16260 3126d14f67ca2e9ccac2972a59083852 822 Pfam PF00571 CBS domain 698 735 0.0071 T 28-03-2018 IPR000644 CBS domain AL549_RS16260 3126d14f67ca2e9ccac2972a59083852 822 Pfam PF00571 CBS domain 764 817 9.0E-4 T 28-03-2018 IPR000644 CBS domain AL549_RS16260 3126d14f67ca2e9ccac2972a59083852 822 SUPERFAMILY SSF54631 690 817 2.02E-13 T 28-03-2018 AL549_RS16260 3126d14f67ca2e9ccac2972a59083852 822 Gene3D G3DSA:3.10.580.10 676 820 5.6E-15 T 28-03-2018 AL549_RS16260 3126d14f67ca2e9ccac2972a59083852 822 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 127 239 1.4E-7 T 28-03-2018 IPR000014 PAS domain AL549_RS16260 3126d14f67ca2e9ccac2972a59083852 822 Pfam PF00989 PAS fold 129 224 4.4E-5 T 28-03-2018 IPR013767 PAS fold GO:0006355 AL549_RS00450 5b1644bc9509e91a2a9ee1a7aecfb94b 195 ProSitePatterns PS00622 LuxR-type HTH domain signature. 153 180 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00450 5b1644bc9509e91a2a9ee1a7aecfb94b 195 SMART SM00448 4 117 5.4E-9 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS00450 5b1644bc9509e91a2a9ee1a7aecfb94b 195 SUPERFAMILY SSF46894 130 191 1.09E-14 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS00450 5b1644bc9509e91a2a9ee1a7aecfb94b 195 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 191 1.3E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00450 5b1644bc9509e91a2a9ee1a7aecfb94b 195 Gene3D G3DSA:3.40.50.2300 1 117 4.8E-19 T 28-03-2018 AL549_RS00450 5b1644bc9509e91a2a9ee1a7aecfb94b 195 Gene3D G3DSA:1.10.10.10 118 194 1.9E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00450 5b1644bc9509e91a2a9ee1a7aecfb94b 195 SUPERFAMILY SSF52172 5 131 1.99E-19 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS00450 5b1644bc9509e91a2a9ee1a7aecfb94b 195 Pfam PF00072 Response regulator receiver domain 6 117 5.5E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS00450 5b1644bc9509e91a2a9ee1a7aecfb94b 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 7.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00450 5b1644bc9509e91a2a9ee1a7aecfb94b 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 7.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00450 5b1644bc9509e91a2a9ee1a7aecfb94b 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 7.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00450 5b1644bc9509e91a2a9ee1a7aecfb94b 195 SMART SM00421 136 193 1.1E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS14750 8507be14d284d6a36d073806c6706b17 133 Gene3D G3DSA:3.30.428.10 1 132 1.7E-24 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL549_RS14750 8507be14d284d6a36d073806c6706b17 133 SUPERFAMILY SSF54197 1 121 1.55E-29 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AL549_RS14750 8507be14d284d6a36d073806c6706b17 133 PRINTS PR00332 Histidine triad family signature 93 103 7.5E-9 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AL549_RS14750 8507be14d284d6a36d073806c6706b17 133 PRINTS PR00332 Histidine triad family signature 25 43 7.5E-9 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AL549_RS14750 8507be14d284d6a36d073806c6706b17 133 PRINTS PR00332 Histidine triad family signature 4 20 7.5E-9 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AL549_RS14750 8507be14d284d6a36d073806c6706b17 133 Pfam PF01230 HIT domain 11 107 8.7E-19 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AL549_RS23610 c0e0f0ded794a4ea0bcdaec0dcd1cefb 268 Pfam PF04784 Protein of unknown function, DUF547 96 206 8.9E-23 T 28-03-2018 IPR006869 Domain of unknown function DUF547 AL549_RS12330 9c8eb3e6abcf264b09ba81c6c7a3f20c 639 SMART SM00267 465 639 4.1E-46 T 28-03-2018 IPR000160 GGDEF domain AL549_RS12330 9c8eb3e6abcf264b09ba81c6c7a3f20c 639 Pfam PF00990 Diguanylate cyclase, GGDEF domain 477 634 4.6E-39 T 28-03-2018 IPR000160 GGDEF domain AL549_RS12330 9c8eb3e6abcf264b09ba81c6c7a3f20c 639 SUPERFAMILY SSF48452 262 390 2.01E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS12330 9c8eb3e6abcf264b09ba81c6c7a3f20c 639 Gene3D G3DSA:1.25.40.10 286 393 3.5E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS12330 9c8eb3e6abcf264b09ba81c6c7a3f20c 639 SMART SM00028 113 146 14.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS12330 9c8eb3e6abcf264b09ba81c6c7a3f20c 639 SMART SM00028 315 348 180.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS12330 9c8eb3e6abcf264b09ba81c6c7a3f20c 639 SMART SM00028 153 186 35.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS12330 9c8eb3e6abcf264b09ba81c6c7a3f20c 639 SMART SM00028 275 308 270.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS12330 9c8eb3e6abcf264b09ba81c6c7a3f20c 639 SMART SM00028 193 226 380.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS12330 9c8eb3e6abcf264b09ba81c6c7a3f20c 639 SMART SM00028 355 388 13.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS12330 9c8eb3e6abcf264b09ba81c6c7a3f20c 639 Gene3D G3DSA:3.30.70.270 459 639 1.1E-45 T 28-03-2018 AL549_RS12330 9c8eb3e6abcf264b09ba81c6c7a3f20c 639 SUPERFAMILY SSF55073 481 637 5.18E-38 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS12330 9c8eb3e6abcf264b09ba81c6c7a3f20c 639 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 472 638 5.6E-46 T 28-03-2018 IPR000160 GGDEF domain AL549_RS12330 9c8eb3e6abcf264b09ba81c6c7a3f20c 639 SUPERFAMILY SSF48452 112 236 2.09E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS12330 9c8eb3e6abcf264b09ba81c6c7a3f20c 639 Gene3D G3DSA:1.10.150.200 161 202 1.5E-8 T 28-03-2018 AL549_RS12330 9c8eb3e6abcf264b09ba81c6c7a3f20c 639 Gene3D G3DSA:1.10.150.200 57 160 0.0053 T 28-03-2018 AL549_RS12330 9c8eb3e6abcf264b09ba81c6c7a3f20c 639 Gene3D G3DSA:1.10.150.200 203 285 0.063 T 28-03-2018 AL549_RS13740 ba91e443d934d2f373bd181200b917a6 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 8.0E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS02670 946562fd9557f8f1d84240589df963c4 397 SUPERFAMILY SSF51556 58 354 2.72E-98 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL549_RS02670 946562fd9557f8f1d84240589df963c4 397 SUPERFAMILY SSF51338 354 385 1.99E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS02670 946562fd9557f8f1d84240589df963c4 397 SUPERFAMILY SSF51338 9 57 1.99E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS02670 946562fd9557f8f1d84240589df963c4 397 PIRSF PIRSF038994 5 387 8.4E-122 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AL549_RS02670 946562fd9557f8f1d84240589df963c4 397 Pfam PF01979 Amidohydrolase family 55 383 4.4E-24 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL549_RS02670 946562fd9557f8f1d84240589df963c4 397 Gene3D G3DSA:3.20.20.140 73 334 3.5E-96 T 28-03-2018 AL549_RS02670 946562fd9557f8f1d84240589df963c4 397 Gene3D G3DSA:2.30.40.10 7 72 6.2E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS02670 946562fd9557f8f1d84240589df963c4 397 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 11 380 1.4E-92 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AL549_RS02670 946562fd9557f8f1d84240589df963c4 397 Gene3D G3DSA:2.30.40.10 335 387 5.4E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS00940 0fd07e1aa9d5cb6d39abdecb62b9626c 251 SMART SM00421 184 241 1.0E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00940 0fd07e1aa9d5cb6d39abdecb62b9626c 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 217 1.8E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00940 0fd07e1aa9d5cb6d39abdecb62b9626c 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 217 229 1.8E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00940 0fd07e1aa9d5cb6d39abdecb62b9626c 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 201 1.8E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00940 0fd07e1aa9d5cb6d39abdecb62b9626c 251 SUPERFAMILY SSF46894 178 246 6.8E-16 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS00940 0fd07e1aa9d5cb6d39abdecb62b9626c 251 Pfam PF00196 Bacterial regulatory proteins, luxR family 185 239 1.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS00940 0fd07e1aa9d5cb6d39abdecb62b9626c 251 Gene3D G3DSA:1.10.10.10 133 249 9.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS12545 db70e59d91115265ec255da69b01d9b4 310 Pfam PF01171 PP-loop family 43 203 1.7E-14 T 28-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AL549_RS12545 db70e59d91115265ec255da69b01d9b4 310 PIRSF PIRSF004976 1 274 3.7E-76 T 28-03-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 AL549_RS12545 db70e59d91115265ec255da69b01d9b4 310 Gene3D G3DSA:3.40.50.620 8 242 1.8E-39 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS12545 db70e59d91115265ec255da69b01d9b4 310 SUPERFAMILY SSF52402 29 255 2.0E-56 T 28-03-2018 AL549_RS12545 db70e59d91115265ec255da69b01d9b4 310 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 11 270 57.707 T 28-03-2018 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 AL549_RS22915 20302346885f4198b8eb2360515fa8ee 750 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 51 744 1.2E-269 T 28-03-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH AL549_RS20425 fb45897a4366302b3a4e8a51cd97dd36 412 Gene3D G3DSA:2.40.160.10 70 410 8.1E-19 T 28-03-2018 AL549_RS20425 fb45897a4366302b3a4e8a51cd97dd36 412 SUPERFAMILY SSF56935 88 400 1.28E-15 T 28-03-2018 AL549_RS17365 5663ce599315dc4ece926b4e2cbac5da 357 SMART SM00260 207 341 4.0E-4 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS17365 5663ce599315dc4ece926b4e2cbac5da 357 SUPERFAMILY SSF50341 210 344 1.7E-13 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS17365 5663ce599315dc4ece926b4e2cbac5da 357 Gene3D G3DSA:2.40.50.180 232 322 0.0035 T 28-03-2018 AL549_RS17365 5663ce599315dc4ece926b4e2cbac5da 357 Pfam PF01584 CheW-like domain 211 343 5.0E-15 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS17365 5663ce599315dc4ece926b4e2cbac5da 357 PIRSF PIRSF020479 7 356 9.0E-154 T 28-03-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like AL549_RS10570 b9af4f51232c954e122af0ea54535971 235 Pfam PF13489 Methyltransferase domain 52 200 1.0E-24 T 28-03-2018 AL549_RS10570 b9af4f51232c954e122af0ea54535971 235 SUPERFAMILY SSF53335 15 230 1.08E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS10570 b9af4f51232c954e122af0ea54535971 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 9 235 38.456 T 28-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AL549_RS10570 b9af4f51232c954e122af0ea54535971 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 3.9E-87 T 28-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AL549_RS10570 b9af4f51232c954e122af0ea54535971 235 Gene3D G3DSA:3.40.50.150 1 235 1.1E-46 T 28-03-2018 AL549_RS06770 0870e67186fa10946b05811ccdba1902 485 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 37 198 4.5E-33 T 28-03-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AL549_RS06770 0870e67186fa10946b05811ccdba1902 485 Gene3D G3DSA:2.70.50.50 24 201 1.7E-53 T 28-03-2018 AL549_RS06770 0870e67186fa10946b05811ccdba1902 485 Gene3D G3DSA:2.10.10.20 432 483 1.4E-4 T 28-03-2018 AL549_RS06770 0870e67186fa10946b05811ccdba1902 485 SUPERFAMILY SSF81296 24 202 3.64E-56 T 28-03-2018 IPR014756 Immunoglobulin E-set AL549_RS06770 0870e67186fa10946b05811ccdba1902 485 Hamap MF_01905 GlcNAc-binding protein A [gbpA]. 3 485 61.226 T 28-03-2018 IPR020879 N-acetylglucosamine-binding protein A GO:0008061 AL549_RS10665 8b4a86fb085a0569a1995173e7130fbf 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 5.6E-21 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL549_RS10665 8b4a86fb085a0569a1995173e7130fbf 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 5.6E-21 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL549_RS10665 8b4a86fb085a0569a1995173e7130fbf 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 5.6E-21 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL549_RS10665 8b4a86fb085a0569a1995173e7130fbf 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 5.6E-21 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL549_RS10665 8b4a86fb085a0569a1995173e7130fbf 152 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 145 1.6E-33 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL549_RS10665 8b4a86fb085a0569a1995173e7130fbf 152 Gene3D G3DSA:3.40.50.2300 1 152 2.5E-46 T 28-03-2018 AL549_RS10665 8b4a86fb085a0569a1995173e7130fbf 152 SUPERFAMILY SSF52788 1 148 1.83E-46 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL549_RS10665 8b4a86fb085a0569a1995173e7130fbf 152 SMART SM00226 2 148 6.2E-36 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL549_RS10930 2ce2f6c4ccc726f3ba359cba6e898e4e 218 SUPERFAMILY SSF56281 4 211 2.44E-55 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS10930 2ce2f6c4ccc726f3ba359cba6e898e4e 218 Gene3D G3DSA:3.60.15.10 3 216 1.5E-40 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS10930 2ce2f6c4ccc726f3ba359cba6e898e4e 218 Pfam PF00753 Metallo-beta-lactamase superfamily 11 195 5.6E-28 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS10930 2ce2f6c4ccc726f3ba359cba6e898e4e 218 SMART SM00849 14 195 1.3E-37 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS02680 fcb5010f710047efd4d312b10fb11491 526 Pfam PF12848 ABC transporter 228 309 1.6E-17 T 28-03-2018 IPR032781 ABC-transporter extension domain AL549_RS02680 fcb5010f710047efd4d312b10fb11491 526 SUPERFAMILY SSF52540 332 510 1.8E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS02680 fcb5010f710047efd4d312b10fb11491 526 Pfam PF00005 ABC transporter 338 465 2.8E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS02680 fcb5010f710047efd4d312b10fb11491 526 Pfam PF00005 ABC transporter 23 188 1.8E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS02680 fcb5010f710047efd4d312b10fb11491 526 Gene3D G3DSA:3.40.50.300 284 520 1.6E-39 T 28-03-2018 AL549_RS02680 fcb5010f710047efd4d312b10fb11491 526 Gene3D G3DSA:3.40.50.300 1 269 7.5E-51 T 28-03-2018 AL549_RS02680 fcb5010f710047efd4d312b10fb11491 526 SMART SM00382 28 235 1.4E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS02680 fcb5010f710047efd4d312b10fb11491 526 SMART SM00382 345 511 3.8E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS02680 fcb5010f710047efd4d312b10fb11491 526 ProSitePatterns PS00211 ABC transporters family signature. 438 452 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS02680 fcb5010f710047efd4d312b10fb11491 526 SUPERFAMILY SSF52540 8 238 6.4E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20960 84283dc51308e10e309e2ab27bb383f6 162 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 28-03-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS20960 84283dc51308e10e309e2ab27bb383f6 162 SUPERFAMILY SSF160369 4 159 4.97E-45 T 28-03-2018 AL549_RS20960 84283dc51308e10e309e2ab27bb383f6 162 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.316 T 28-03-2018 IPR022973 Ribosomal protein L10 AL549_RS20960 84283dc51308e10e309e2ab27bb383f6 162 Pfam PF00466 Ribosomal protein L10 5 101 2.1E-26 T 28-03-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AL549_RS23615 10e0c337f49f4c9703df62fc203e25c8 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 43.709 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AL549_RS23615 10e0c337f49f4c9703df62fc203e25c8 200 Pfam PF00694 Aconitase C-terminal domain 1 125 2.3E-39 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AL549_RS23615 10e0c337f49f4c9703df62fc203e25c8 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 1.5E-96 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AL549_RS23615 10e0c337f49f4c9703df62fc203e25c8 200 SUPERFAMILY SSF52016 1 193 9.81E-60 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL549_RS23615 10e0c337f49f4c9703df62fc203e25c8 200 Gene3D G3DSA:3.20.19.10 1 176 2.2E-50 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL549_RS13700 2f246f54a6addbf93fa5a9d339eda0ba 55 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.2E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS11635 9f6a37d306435e3c4b639997db9533ba 245 Gene3D G3DSA:3.40.50.620 48 183 4.1E-22 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS11635 9f6a37d306435e3c4b639997db9533ba 245 Pfam PF02698 DUF218 domain 58 182 6.4E-22 T 28-03-2018 IPR003848 Domain of unknown function DUF218 AL549_RS16185 ed163dd4ac6c0ff1df808dfa900938d2 172 SUPERFAMILY SSF158442 17 163 8.11E-44 T 28-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AL549_RS16185 ed163dd4ac6c0ff1df808dfa900938d2 172 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 1.4E-43 T 28-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AL549_RS16185 ed163dd4ac6c0ff1df808dfa900938d2 172 Gene3D G3DSA:1.20.1550.10 3 172 1.9E-50 T 28-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AL549_RS16185 ed163dd4ac6c0ff1df808dfa900938d2 172 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 21.991 T 28-03-2018 IPR022920 Disulphide bond formation protein DsbB AL549_RS08565 af19242a50b4378bad0ae0bf3edd0bd5 101 Pfam PF12286 Protein of unknown function (DUF3622) 1 71 6.0E-36 T 28-03-2018 IPR022069 Protein of unknown function DUF3622 AL549_RS01255 b8336cbfce61bc5ad077ade8f5a9ed49 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 374 396 5.0E-57 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AL549_RS01255 b8336cbfce61bc5ad077ade8f5a9ed49 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 324 339 5.0E-57 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AL549_RS01255 b8336cbfce61bc5ad077ade8f5a9ed49 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 432 447 5.0E-57 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AL549_RS01255 b8336cbfce61bc5ad077ade8f5a9ed49 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 207 222 5.0E-57 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AL549_RS01255 b8336cbfce61bc5ad077ade8f5a9ed49 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 296 310 5.0E-57 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AL549_RS01255 b8336cbfce61bc5ad077ade8f5a9ed49 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 258 278 5.0E-57 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AL549_RS01255 b8336cbfce61bc5ad077ade8f5a9ed49 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 505 521 5.0E-57 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AL549_RS01255 b8336cbfce61bc5ad077ade8f5a9ed49 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 480 496 5.0E-57 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AL549_RS01255 b8336cbfce61bc5ad077ade8f5a9ed49 706 SUPERFAMILY SSF51445 291 623 3.83E-104 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS01255 b8336cbfce61bc5ad077ade8f5a9ed49 706 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 611 692 9.8E-10 T 28-03-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AL549_RS01255 b8336cbfce61bc5ad077ade8f5a9ed49 706 ProSitePatterns PS00512 Alpha-galactosidase signature. 325 340 - T 28-03-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AL549_RS01255 b8336cbfce61bc5ad077ade8f5a9ed49 706 Pfam PF02065 Melibiase 255 594 4.7E-120 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AL549_RS01255 b8336cbfce61bc5ad077ade8f5a9ed49 706 Gene3D G3DSA:3.20.20.70 276 592 4.3E-51 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS01255 b8336cbfce61bc5ad077ade8f5a9ed49 706 Gene3D G3DSA:2.60.40.1180 593 706 1.2E-18 T 28-03-2018 AL549_RS01255 b8336cbfce61bc5ad077ade8f5a9ed49 706 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 25 237 2.8E-41 T 28-03-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AL549_RS01255 b8336cbfce61bc5ad077ade8f5a9ed49 706 Gene3D G3DSA:2.70.98.60 1 275 4.6E-61 T 28-03-2018 AL549_RS01255 b8336cbfce61bc5ad077ade8f5a9ed49 706 PIRSF PIRSF005536 1 704 3.2E-232 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AL549_RS00575 83d17bad933909d7eac5c44bcc5e0595 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 7.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS00575 83d17bad933909d7eac5c44bcc5e0595 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 7.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS00575 83d17bad933909d7eac5c44bcc5e0595 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 7.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS00575 83d17bad933909d7eac5c44bcc5e0595 303 SUPERFAMILY SSF53850 95 300 5.12E-38 T 28-03-2018 AL549_RS00575 83d17bad933909d7eac5c44bcc5e0595 303 Gene3D G3DSA:1.10.10.10 8 88 4.4E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00575 83d17bad933909d7eac5c44bcc5e0595 303 Gene3D G3DSA:3.40.190.10 94 181 1.2E-12 T 28-03-2018 AL549_RS00575 83d17bad933909d7eac5c44bcc5e0595 303 Gene3D G3DSA:3.40.190.10 182 269 8.5E-25 T 28-03-2018 AL549_RS00575 83d17bad933909d7eac5c44bcc5e0595 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 3.5E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS00575 83d17bad933909d7eac5c44bcc5e0595 303 SUPERFAMILY SSF46785 11 91 4.79E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00575 83d17bad933909d7eac5c44bcc5e0595 303 Pfam PF03466 LysR substrate binding domain 94 300 1.5E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS21340 a6d7c60fb04bdf7e24a3212869cb75f2 844 Pfam PF01295 Adenylate cyclase, class-I 226 829 8.1E-256 T 28-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AL549_RS21340 a6d7c60fb04bdf7e24a3212869cb75f2 844 PIRSF PIRSF001444 1 844 0.0 T 28-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AL549_RS21340 a6d7c60fb04bdf7e24a3212869cb75f2 844 Pfam PF12633 Adenylate cyclase NT domain 5 198 4.0E-76 T 28-03-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 AL549_RS01170 da2eda89c8e25fb3b9d65b79b4e1428e 387 Gene3D G3DSA:1.10.441.10 160 260 1.5E-30 T 28-03-2018 AL549_RS01170 da2eda89c8e25fb3b9d65b79b4e1428e 387 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 122 130 - T 28-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS01170 da2eda89c8e25fb3b9d65b79b4e1428e 387 PRINTS PR00714 Phosphomannose isomerase type I signature 122 145 2.5E-69 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS01170 da2eda89c8e25fb3b9d65b79b4e1428e 387 PRINTS PR00714 Phosphomannose isomerase type I signature 234 253 2.5E-69 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS01170 da2eda89c8e25fb3b9d65b79b4e1428e 387 PRINTS PR00714 Phosphomannose isomerase type I signature 253 272 2.5E-69 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS01170 da2eda89c8e25fb3b9d65b79b4e1428e 387 PRINTS PR00714 Phosphomannose isomerase type I signature 29 44 2.5E-69 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS01170 da2eda89c8e25fb3b9d65b79b4e1428e 387 PRINTS PR00714 Phosphomannose isomerase type I signature 218 233 2.5E-69 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS01170 da2eda89c8e25fb3b9d65b79b4e1428e 387 PRINTS PR00714 Phosphomannose isomerase type I signature 272 291 2.5E-69 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS01170 da2eda89c8e25fb3b9d65b79b4e1428e 387 PRINTS PR00714 Phosphomannose isomerase type I signature 1 19 2.5E-69 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS01170 da2eda89c8e25fb3b9d65b79b4e1428e 387 PRINTS PR00714 Phosphomannose isomerase type I signature 77 98 2.5E-69 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS01170 da2eda89c8e25fb3b9d65b79b4e1428e 387 Pfam PF01238 Phosphomannose isomerase type I 2 350 6.6E-88 T 28-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS01170 da2eda89c8e25fb3b9d65b79b4e1428e 387 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 253 278 - T 28-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS01170 da2eda89c8e25fb3b9d65b79b4e1428e 387 Gene3D G3DSA:2.60.120.10 2 159 7.5E-52 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS01170 da2eda89c8e25fb3b9d65b79b4e1428e 387 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 2 379 3.2E-95 T 28-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS01170 da2eda89c8e25fb3b9d65b79b4e1428e 387 Gene3D G3DSA:2.60.120.10 293 387 2.0E-12 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS01170 da2eda89c8e25fb3b9d65b79b4e1428e 387 SUPERFAMILY SSF51182 1 378 3.27E-106 T 28-03-2018 IPR011051 RmlC-like cupin domain AL549_RS01170 da2eda89c8e25fb3b9d65b79b4e1428e 387 PIRSF PIRSF001480 1 387 6.9E-103 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL549_RS16720 a62df33b7a564a6db662f5b31c6c5482 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 28-03-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 AL549_RS16720 a62df33b7a564a6db662f5b31c6c5482 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 260 2.5E-19 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS16720 a62df33b7a564a6db662f5b31c6c5482 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 5.2E-86 T 28-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AL549_RS16720 a62df33b7a564a6db662f5b31c6c5482 268 SUPERFAMILY SSF56219 1 268 4.06E-85 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS16720 a62df33b7a564a6db662f5b31c6c5482 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 28-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AL549_RS16720 a62df33b7a564a6db662f5b31c6c5482 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 1.9E-98 T 28-03-2018 AL549_RS16720 a62df33b7a564a6db662f5b31c6c5482 268 Gene3D G3DSA:3.60.10.10 1 268 7.6E-50 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS17215 cf0c97c1ef280f5f2d0ca2a7114e4638 377 SUPERFAMILY SSF52283 1 109 4.25E-23 T 28-03-2018 AL549_RS17215 cf0c97c1ef280f5f2d0ca2a7114e4638 377 Gene3D G3DSA:3.40.50.720 1 105 2.2E-26 T 28-03-2018 AL549_RS17215 cf0c97c1ef280f5f2d0ca2a7114e4638 377 SUPERFAMILY SSF51735 93 258 2.32E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS17215 cf0c97c1ef280f5f2d0ca2a7114e4638 377 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 284 1.3E-22 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AL549_RS17215 cf0c97c1ef280f5f2d0ca2a7114e4638 377 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 46.207 T 28-03-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 AL549_RS17215 cf0c97c1ef280f5f2d0ca2a7114e4638 377 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL549_RS17215 cf0c97c1ef280f5f2d0ca2a7114e4638 377 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 1.2E-28 T 28-03-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 AL549_RS17215 cf0c97c1ef280f5f2d0ca2a7114e4638 377 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 257 3.2E-34 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL549_RS17215 cf0c97c1ef280f5f2d0ca2a7114e4638 377 Gene3D G3DSA:3.40.50.720 106 258 4.8E-32 T 28-03-2018 AL549_RS12315 d415b00e0141dd4fa198981c1e567f83 280 Gene3D G3DSA:3.30.1330.60 105 275 2.3E-31 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS12315 d415b00e0141dd4fa198981c1e567f83 280 SUPERFAMILY SSF103088 153 264 7.06E-30 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS12315 d415b00e0141dd4fa198981c1e567f83 280 PRINTS PR01021 OMPA domain signature 209 225 3.0E-9 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS12315 d415b00e0141dd4fa198981c1e567f83 280 PRINTS PR01021 OMPA domain signature 194 209 3.0E-9 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS12315 d415b00e0141dd4fa198981c1e567f83 280 PRINTS PR01021 OMPA domain signature 164 186 3.0E-9 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS12315 d415b00e0141dd4fa198981c1e567f83 280 Pfam PF00691 OmpA family 164 258 8.0E-22 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS01240 5d5e137a3c0e38fcd8f07e7257194f07 244 Gene3D G3DSA:3.40.1280.10 94 244 6.5E-34 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL549_RS01240 5d5e137a3c0e38fcd8f07e7257194f07 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 6.6E-29 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL549_RS01240 5d5e137a3c0e38fcd8f07e7257194f07 244 SUPERFAMILY SSF75217 97 243 1.18E-33 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AL549_RS01240 5d5e137a3c0e38fcd8f07e7257194f07 244 SUPERFAMILY SSF55315 4 92 4.24E-12 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like AL549_RS01240 5d5e137a3c0e38fcd8f07e7257194f07 244 Gene3D G3DSA:3.30.1330.30 2 93 6.9E-14 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like AL549_RS03300 90f005bac1561acd258d83c584c0d447 374 PIRSF PIRSF037238 1 373 3.9E-147 T 28-03-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase AL549_RS03300 90f005bac1561acd258d83c584c0d447 374 Gene3D G3DSA:3.40.630.10 4 374 4.9E-47 T 28-03-2018 AL549_RS03300 90f005bac1561acd258d83c584c0d447 374 Pfam PF07687 Peptidase dimerisation domain 175 273 5.5E-22 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL549_RS03300 90f005bac1561acd258d83c584c0d447 374 SUPERFAMILY SSF55031 177 285 1.31E-23 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL549_RS03300 90f005bac1561acd258d83c584c0d447 374 SUPERFAMILY SSF53187 2 186 1.37E-38 T 28-03-2018 AL549_RS03300 90f005bac1561acd258d83c584c0d447 374 SUPERFAMILY SSF53187 298 373 1.37E-38 T 28-03-2018 AL549_RS03300 90f005bac1561acd258d83c584c0d447 374 Pfam PF01546 Peptidase family M20/M25/M40 74 370 1.7E-24 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL549_RS14315 c0ba781ce3c70e4b3e10d197f7707fa8 35 Pfam PF11665 Protein of unknown function (DUF3265) 3 29 2.7E-10 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS19830 691c2019b277db132774e8edee31114d 282 SUPERFAMILY SSF52540 5 261 1.65E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS19830 691c2019b277db132774e8edee31114d 282 Pfam PF13401 AAA domain 42 168 3.7E-22 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS19830 691c2019b277db132774e8edee31114d 282 Gene3D G3DSA:3.40.50.300 14 264 3.9E-9 T 28-03-2018 AL549_RS20145 fe9e6791bdc55a6e9f8a4ed056232fcf 263 SUPERFAMILY SSF53633 8 262 4.19E-59 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL549_RS20145 fe9e6791bdc55a6e9f8a4ed056232fcf 263 PIRSF PIRSF000728 2 262 4.8E-70 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL549_RS20145 fe9e6791bdc55a6e9f8a4ed056232fcf 263 Hamap MF_00082_B Acetylglutamate kinase [argB]. 5 262 26.802 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL549_RS20145 fe9e6791bdc55a6e9f8a4ed056232fcf 263 Pfam PF00696 Amino acid kinase family 9 231 1.6E-36 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL549_RS20145 fe9e6791bdc55a6e9f8a4ed056232fcf 263 Gene3D G3DSA:3.40.1160.10 7 262 8.0E-46 T 28-03-2018 AL549_RS20145 fe9e6791bdc55a6e9f8a4ed056232fcf 263 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 235 2.1E-64 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 Pfam PF00679 Elongation factor G C-terminus 399 483 6.9E-20 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 SUPERFAMILY SSF54980 399 493 1.97E-24 T 28-03-2018 IPR035647 EF-G domain III/V-like AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.1E-53 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 3.2E-9 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 Gene3D G3DSA:3.30.70.870 288 367 1.4E-27 T 28-03-2018 AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 SUPERFAMILY SSF50447 165 288 3.31E-29 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 304.312 T 28-03-2018 IPR006297 Elongation factor 4 GO:0005525 AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 SMART SM00838 398 486 0.0072 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 Gene3D G3DSA:3.30.70.240 390 549 3.0E-26 T 28-03-2018 AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 176 4.9E-17 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 Gene3D G3DSA:2.40.30.10 188 287 9.3E-23 T 28-03-2018 AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 1.8E-299 T 28-03-2018 IPR006297 Elongation factor 4 GO:0005525 AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 SUPERFAMILY SSF52540 2 205 1.68E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.8E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.8E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.8E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.8E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.8E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 SUPERFAMILY SSF54980 292 370 2.09E-18 T 28-03-2018 IPR035647 EF-G domain III/V-like AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 Gene3D G3DSA:3.40.50.300 1 185 1.3E-37 T 28-03-2018 AL549_RS19210 5b83697b8764c9e6d6c56386a7684ea0 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.8E-49 T 28-03-2018 IPR013842 GTP-binding protein LepA, C-terminal AL549_RS02585 9932e2d0cb0a18253436299af57cf980 202 Pfam PF06055 Exopolysaccharide synthesis, ExoD 23 193 1.4E-50 T 28-03-2018 IPR010331 Exopolysaccharide synthesis, ExoD AL549_RS02585 9932e2d0cb0a18253436299af57cf980 202 PIRSF PIRSF033239 10 202 1.1E-60 T 28-03-2018 IPR010331 Exopolysaccharide synthesis, ExoD AL549_RS11505 12513114a3a37fedbffb17bc65387617 389 Gene3D G3DSA:1.20.1530.10 3 379 1.6E-147 T 28-03-2018 IPR023171 Na/H antiporter domain AL549_RS11505 12513114a3a37fedbffb17bc65387617 389 Pfam PF06965 Na+/H+ antiporter 1 7 373 3.5E-145 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AL549_RS11505 12513114a3a37fedbffb17bc65387617 389 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 1.5E-188 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AL549_RS11505 12513114a3a37fedbffb17bc65387617 389 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 379 23.548 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AL549_RS21130 5dbae1d86001497542c4b16b2192b76d 270 Pfam PF04072 Leucine carboxyl methyltransferase 72 226 2.8E-7 T 28-03-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 AL549_RS21130 5dbae1d86001497542c4b16b2192b76d 270 Gene3D G3DSA:3.40.50.150 2 240 2.5E-20 T 28-03-2018 AL549_RS21130 5dbae1d86001497542c4b16b2192b76d 270 PIRSF PIRSF028177 3 270 6.9E-67 T 28-03-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 AL549_RS21130 5dbae1d86001497542c4b16b2192b76d 270 SUPERFAMILY SSF53335 17 252 3.49E-34 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS07410 f94f54cc5e05434df5dd4f65d6c62330 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.661 T 28-03-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL549_RS07410 f94f54cc5e05434df5dd4f65d6c62330 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 469 1.0E-135 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS07410 f94f54cc5e05434df5dd4f65d6c62330 761 SUPERFAMILY SSF56719 33 485 5.75E-154 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL549_RS07410 f94f54cc5e05434df5dd4f65d6c62330 761 SUPERFAMILY SSF101904 499 743 4.45E-51 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AL549_RS07410 f94f54cc5e05434df5dd4f65d6c62330 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 691 2.1E-8 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL549_RS07410 f94f54cc5e05434df5dd4f65d6c62330 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 637 0.0075 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL549_RS07410 f94f54cc5e05434df5dd4f65d6c62330 761 Gene3D G3DSA:3.90.199.10 36 218 1.3E-75 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AL549_RS07410 f94f54cc5e05434df5dd4f65d6c62330 761 Gene3D G3DSA:2.120.10.90 497 745 1.7E-40 T 28-03-2018 AL549_RS07410 f94f54cc5e05434df5dd4f65d6c62330 761 Gene3D G3DSA:1.10.268.10 346 485 1.4E-44 T 28-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS07410 f94f54cc5e05434df5dd4f65d6c62330 761 SMART SM00434 13 463 1.1E-227 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL549_RS07410 f94f54cc5e05434df5dd4f65d6c62330 761 Gene3D G3DSA:3.30.1360.40 240 333 2.4E-23 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AL549_RS07410 f94f54cc5e05434df5dd4f65d6c62330 761 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 28-03-2018 AL549_RS08735 e97d76ace9669bfaa7cbdea6907008e0 281 PIRSF PIRSF004750 6 281 2.6E-131 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL549_RS08735 e97d76ace9669bfaa7cbdea6907008e0 281 Pfam PF14489 QueF-like protein 194 270 2.4E-27 T 28-03-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL549_RS08735 e97d76ace9669bfaa7cbdea6907008e0 281 Gene3D G3DSA:3.30.1130.10 21 135 3.4E-42 T 28-03-2018 AL549_RS08735 e97d76ace9669bfaa7cbdea6907008e0 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 8.4E-129 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL549_RS08735 e97d76ace9669bfaa7cbdea6907008e0 281 SUPERFAMILY SSF55620 184 267 2.15E-10 T 28-03-2018 AL549_RS08735 e97d76ace9669bfaa7cbdea6907008e0 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 2.2E-49 T 28-03-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL549_RS08735 e97d76ace9669bfaa7cbdea6907008e0 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 165.316 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL549_RS08735 e97d76ace9669bfaa7cbdea6907008e0 281 Gene3D G3DSA:3.30.1130.10 143 281 2.0E-52 T 28-03-2018 AL549_RS10485 ea97c312b4e1d9d22e91fbdca9e8da20 789 Pfam PF03104 DNA polymerase family B, exonuclease domain 84 298 5.0E-16 T 28-03-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS10485 ea97c312b4e1d9d22e91fbdca9e8da20 789 Pfam PF00136 DNA polymerase family B 378 746 7.7E-43 T 28-03-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS10485 ea97c312b4e1d9d22e91fbdca9e8da20 789 SMART SM00486 155 560 5.1E-61 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS10485 ea97c312b4e1d9d22e91fbdca9e8da20 789 Gene3D G3DSA:3.30.420.10 81 349 4.5E-40 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS10485 ea97c312b4e1d9d22e91fbdca9e8da20 789 ProSitePatterns PS00116 DNA polymerase family B signature. 548 556 - T 28-03-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS10485 ea97c312b4e1d9d22e91fbdca9e8da20 789 SUPERFAMILY SSF53098 5 391 1.11E-85 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS10485 ea97c312b4e1d9d22e91fbdca9e8da20 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 546 554 1.6E-10 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS10485 ea97c312b4e1d9d22e91fbdca9e8da20 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 494 506 1.6E-10 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS10485 ea97c312b4e1d9d22e91fbdca9e8da20 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 417 430 1.6E-10 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS10485 ea97c312b4e1d9d22e91fbdca9e8da20 789 SUPERFAMILY SSF56672 387 784 5.56E-114 T 28-03-2018 AL549_RS10485 ea97c312b4e1d9d22e91fbdca9e8da20 789 Gene3D G3DSA:3.90.1600.10 404 642 2.4E-49 T 28-03-2018 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS15565 4984faa6cb3709abcc3cea4c52adf8cc 401 SUPERFAMILY SSF103473 9 389 7.59E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS15565 4984faa6cb3709abcc3cea4c52adf8cc 401 Gene3D G3DSA:1.20.1250.20 6 198 7.4E-31 T 28-03-2018 AL549_RS15565 4984faa6cb3709abcc3cea4c52adf8cc 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 384 6.9E-60 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AL549_RS15565 4984faa6cb3709abcc3cea4c52adf8cc 401 Pfam PF07690 Major Facilitator Superfamily 15 354 2.6E-43 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS15565 4984faa6cb3709abcc3cea4c52adf8cc 401 Gene3D G3DSA:1.20.1250.20 199 394 9.0E-13 T 28-03-2018 AL549_RS03755 b0b12e316a3842d57caa8d33bc6de692 193 SUPERFAMILY SSF56925 25 193 1.83E-26 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS03755 b0b12e316a3842d57caa8d33bc6de692 193 Pfam PF13505 Outer membrane protein beta-barrel domain 9 193 3.8E-23 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel AL549_RS03755 b0b12e316a3842d57caa8d33bc6de692 193 Gene3D G3DSA:2.40.160.20 6 193 4.7E-22 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS01850 a25c020a705feaff1611a67bb7793f4c 553 SMART SM00304 222 276 6.0E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS01850 a25c020a705feaff1611a67bb7793f4c 553 SMART SM01049 44 130 3.8E-19 T 28-03-2018 IPR033480 Single Cache domain 2 AL549_RS01850 a25c020a705feaff1611a67bb7793f4c 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 516 1.1E-40 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS01850 a25c020a705feaff1611a67bb7793f4c 553 Pfam PF17200 Single Cache domain 2 48 188 2.0E-32 T 28-03-2018 IPR033480 Single Cache domain 2 AL549_RS01850 a25c020a705feaff1611a67bb7793f4c 553 SMART SM00283 291 552 1.9E-71 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS01850 a25c020a705feaff1611a67bb7793f4c 553 Gene3D G3DSA:1.10.287.950 337 553 7.9E-48 T 28-03-2018 AL549_RS01850 a25c020a705feaff1611a67bb7793f4c 553 Gene3D G3DSA:1.10.287.1060 252 336 8.3E-4 T 28-03-2018 AL549_RS01850 a25c020a705feaff1611a67bb7793f4c 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 7.8E-6 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS01850 a25c020a705feaff1611a67bb7793f4c 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 305 334 7.8E-6 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS01850 a25c020a705feaff1611a67bb7793f4c 553 Gene3D G3DSA:3.30.450.20 28 202 4.0E-39 T 28-03-2018 AL549_RS01850 a25c020a705feaff1611a67bb7793f4c 553 SUPERFAMILY SSF58104 244 553 1.01E-74 T 28-03-2018 AL549_RS22330 aad5ddc42a5837569392c52ca169e91b 544 SUPERFAMILY SSF56112 94 158 1.49E-45 T 28-03-2018 IPR011009 Protein kinase-like domain AL549_RS22330 aad5ddc42a5837569392c52ca169e91b 544 SUPERFAMILY SSF56112 193 436 1.49E-45 T 28-03-2018 IPR011009 Protein kinase-like domain AL549_RS22330 aad5ddc42a5837569392c52ca169e91b 544 Pfam PF03109 ABC1 family 112 231 4.0E-36 T 28-03-2018 IPR004147 UbiB domain AL549_RS22330 aad5ddc42a5837569392c52ca169e91b 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.838 T 28-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AL549_RS22330 aad5ddc42a5837569392c52ca169e91b 544 Gene3D G3DSA:3.30.200.20 103 244 4.1E-20 T 28-03-2018 AL549_RS22330 aad5ddc42a5837569392c52ca169e91b 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 5.1E-176 T 28-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AL549_RS04245 7ab77eecff1b134fa0f34839e4fcc293 143 SUPERFAMILY SSF55729 32 139 8.61E-24 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS04245 7ab77eecff1b134fa0f34839e4fcc293 143 Gene3D G3DSA:3.40.630.30 14 143 9.0E-21 T 28-03-2018 AL549_RS04245 7ab77eecff1b134fa0f34839e4fcc293 143 Pfam PF00583 Acetyltransferase (GNAT) family 35 117 5.5E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS16350 1963c92efaba729677c1a0ed9a18599a 172 SUPERFAMILY SSF55729 17 162 3.19E-18 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS16350 1963c92efaba729677c1a0ed9a18599a 172 Pfam PF13302 Acetyltransferase (GNAT) domain 57 148 1.1E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS16350 1963c92efaba729677c1a0ed9a18599a 172 Gene3D G3DSA:3.40.630.30 9 163 1.5E-14 T 28-03-2018 AL549_RS08155 d45f46c021a17c2c34e4b95abf1cd15b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS08155 d45f46c021a17c2c34e4b95abf1cd15b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS08155 d45f46c021a17c2c34e4b95abf1cd15b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS08155 d45f46c021a17c2c34e4b95abf1cd15b 301 Gene3D G3DSA:3.40.190.10 184 275 5.6E-13 T 28-03-2018 AL549_RS08155 d45f46c021a17c2c34e4b95abf1cd15b 301 Gene3D G3DSA:3.40.190.10 95 183 2.1E-16 T 28-03-2018 AL549_RS08155 d45f46c021a17c2c34e4b95abf1cd15b 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 1.1E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS08155 d45f46c021a17c2c34e4b95abf1cd15b 301 Gene3D G3DSA:1.10.10.10 2 87 5.5E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS08155 d45f46c021a17c2c34e4b95abf1cd15b 301 SUPERFAMILY SSF53850 96 300 1.99E-35 T 28-03-2018 AL549_RS08155 d45f46c021a17c2c34e4b95abf1cd15b 301 Pfam PF03466 LysR substrate binding domain 95 299 2.8E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS08155 d45f46c021a17c2c34e4b95abf1cd15b 301 SUPERFAMILY SSF46785 4 117 1.15E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS17240 5b0d759699c0f388bacb2c85671103df 207 Pfam PF03458 UPF0126 domain 5 76 1.0E-18 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 AL549_RS17240 5b0d759699c0f388bacb2c85671103df 207 Pfam PF03458 UPF0126 domain 92 163 8.2E-20 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 AL549_RS19640 90b7f1f3ad25035463b1aa6e5a83fe20 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 1.2E-67 T 28-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AL549_RS19640 90b7f1f3ad25035463b1aa6e5a83fe20 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 1.7E-116 T 28-03-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AL549_RS19290 b88c32bdd7e0344e9ba315be49253ef3 199 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 189 1.6E-52 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AL549_RS19290 b88c32bdd7e0344e9ba315be49253ef3 199 SUPERFAMILY SSF100950 5 197 1.67E-58 T 28-03-2018 AL549_RS19290 b88c32bdd7e0344e9ba315be49253ef3 199 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 6 189 1.8E-43 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AL549_RS19290 b88c32bdd7e0344e9ba315be49253ef3 199 PIRSF PIRSF006806 3 192 3.2E-34 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AL549_RS19290 b88c32bdd7e0344e9ba315be49253ef3 199 Gene3D G3DSA:3.40.50.10420 2 199 4.8E-57 T 28-03-2018 AL549_RS19465 ea333a02c3261c4ea794d639495dc13a 379 SUPERFAMILY SSF53955 183 371 7.32E-37 T 28-03-2018 IPR023346 Lysozyme-like domain AL549_RS19465 ea333a02c3261c4ea794d639495dc13a 379 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AL549_RS19465 ea333a02c3261c4ea794d639495dc13a 379 Pfam PF01464 Transglycosylase SLT domain 211 332 1.2E-27 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AL549_RS19465 ea333a02c3261c4ea794d639495dc13a 379 Gene3D G3DSA:1.10.530.10 189 375 1.3E-33 T 28-03-2018 AL549_RS19465 ea333a02c3261c4ea794d639495dc13a 379 Pfam PF11873 Domain of unknown function (DUF3393) 6 206 3.5E-79 T 28-03-2018 IPR024570 Murein transglycosylase-C, N-terminal AL549_RS17550 aa0a4c42763b3fabf02c3333f7ae4b0a 120 Pfam PF11169 Protein of unknown function (DUF2956) 11 117 3.0E-43 T 28-03-2018 IPR021339 Protein of unknown function DUF2956 AL549_RS19190 86746cf147416237f2ec59a613c40f4a 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 9 233 1.7E-40 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AL549_RS19190 86746cf147416237f2ec59a613c40f4a 243 Hamap MF_00201 DNA repair protein RecO [recO]. 4 233 22.96 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AL549_RS19190 86746cf147416237f2ec59a613c40f4a 243 Pfam PF11967 Recombination protein O N terminal 8 79 4.4E-23 T 28-03-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal AL549_RS19190 86746cf147416237f2ec59a613c40f4a 243 SUPERFAMILY SSF57863 88 168 1.67E-12 T 28-03-2018 AL549_RS19190 86746cf147416237f2ec59a613c40f4a 243 Pfam PF02565 Recombination protein O C terminal 88 228 3.4E-24 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AL549_RS19190 86746cf147416237f2ec59a613c40f4a 243 Gene3D G3DSA:2.40.50.140 7 79 2.2E-25 T 28-03-2018 AL549_RS19190 86746cf147416237f2ec59a613c40f4a 243 SUPERFAMILY SSF50249 8 78 1.18E-14 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS04645 d24da13c2540f74518baf33c350a1826 152 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 109 3.1E-25 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AL549_RS04645 d24da13c2540f74518baf33c350a1826 152 SUPERFAMILY SSF53927 8 146 1.29E-31 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL549_RS04645 d24da13c2540f74518baf33c350a1826 152 PIRSF PIRSF006019 1 147 3.3E-44 T 28-03-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL549_RS04645 d24da13c2540f74518baf33c350a1826 152 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL549_RS04645 d24da13c2540f74518baf33c350a1826 152 Gene3D G3DSA:3.40.140.10 1 148 6.4E-32 T 28-03-2018 AL549_RS03570 dc166ed1aeb99c789d1d3b321eae2bf8 423 Pfam PF00668 Condensation domain 3 413 1.5E-43 T 28-03-2018 IPR001242 Condensation domain AL549_RS03570 dc166ed1aeb99c789d1d3b321eae2bf8 423 SUPERFAMILY SSF52777 185 414 3.04E-17 T 28-03-2018 AL549_RS03570 dc166ed1aeb99c789d1d3b321eae2bf8 423 SUPERFAMILY SSF52777 5 179 1.07E-30 T 28-03-2018 AL549_RS03570 dc166ed1aeb99c789d1d3b321eae2bf8 423 Gene3D G3DSA:3.30.559.10 2 187 3.0E-19 T 28-03-2018 AL549_RS22465 60537e3cb9dfa6c4d585f1797e154b78 291 SUPERFAMILY SSF64397 4 231 4.71E-75 T 28-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AL549_RS22465 60537e3cb9dfa6c4d585f1797e154b78 291 Gene3D G3DSA:3.55.30.10 1 175 1.1E-59 T 28-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AL549_RS22465 60537e3cb9dfa6c4d585f1797e154b78 291 PIRSF PIRSF005261 1 284 4.7E-71 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AL549_RS22465 60537e3cb9dfa6c4d585f1797e154b78 291 Pfam PF01430 Hsp33 protein 6 272 2.4E-79 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AL549_RS22465 60537e3cb9dfa6c4d585f1797e154b78 291 SUPERFAMILY SSF118352 224 282 9.29E-18 T 28-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AL549_RS22465 60537e3cb9dfa6c4d585f1797e154b78 291 Gene3D G3DSA:1.10.287.480 180 224 9.1E-20 T 28-03-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain AL549_RS22465 60537e3cb9dfa6c4d585f1797e154b78 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 32.028 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AL549_RS22465 60537e3cb9dfa6c4d585f1797e154b78 291 Gene3D G3DSA:3.90.1280.10 225 280 1.9E-19 T 28-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AL549_RS17285 551f998f6e449c5e4708d33b9cf0d3a7 191 Gene3D G3DSA:1.10.1740.10 20 94 2.5E-19 T 28-03-2018 AL549_RS17285 551f998f6e449c5e4708d33b9cf0d3a7 191 Pfam PF04542 Sigma-70 region 2 33 99 1.0E-17 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS17285 551f998f6e449c5e4708d33b9cf0d3a7 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 55 86 - T 28-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS17285 551f998f6e449c5e4708d33b9cf0d3a7 191 Pfam PF08281 Sigma-70, region 4 123 175 5.8E-10 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS17285 551f998f6e449c5e4708d33b9cf0d3a7 191 SUPERFAMILY SSF88659 120 180 3.18E-12 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS17285 551f998f6e449c5e4708d33b9cf0d3a7 191 SUPERFAMILY SSF88946 27 109 2.38E-21 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS17285 551f998f6e449c5e4708d33b9cf0d3a7 191 Gene3D G3DSA:1.10.10.10 95 182 1.1E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS17285 551f998f6e449c5e4708d33b9cf0d3a7 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 179 1.9E-22 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS21255 ee1ae1479670d7c001a5291b14dd9063 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 2.3E-118 T 28-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS21255 ee1ae1479670d7c001a5291b14dd9063 333 SUPERFAMILY SSF51735 1 180 7.01E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS21255 ee1ae1479670d7c001a5291b14dd9063 333 Gene3D G3DSA:3.40.50.720 1 161 9.4E-60 T 28-03-2018 AL549_RS21255 ee1ae1479670d7c001a5291b14dd9063 333 PIRSF PIRSF000149 1 333 1.6E-112 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS21255 ee1ae1479670d7c001a5291b14dd9063 333 Gene3D G3DSA:3.30.360.10 162 315 2.1E-57 T 28-03-2018 AL549_RS21255 ee1ae1479670d7c001a5291b14dd9063 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 28-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS21255 ee1ae1479670d7c001a5291b14dd9063 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 1.4E-31 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS21255 ee1ae1479670d7c001a5291b14dd9063 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 6.8E-58 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS21255 ee1ae1479670d7c001a5291b14dd9063 333 SUPERFAMILY SSF55347 152 314 2.53E-62 T 28-03-2018 AL549_RS21255 ee1ae1479670d7c001a5291b14dd9063 333 SMART SM00846 3 152 2.0E-67 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS21255 ee1ae1479670d7c001a5291b14dd9063 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 4.8E-27 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS21255 ee1ae1479670d7c001a5291b14dd9063 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 4.8E-27 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS21255 ee1ae1479670d7c001a5291b14dd9063 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 4.8E-27 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS21255 ee1ae1479670d7c001a5291b14dd9063 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 4.8E-27 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS21255 ee1ae1479670d7c001a5291b14dd9063 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 4.8E-27 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS22020 2bcf2d237ffd37b61a4a591148c987ae 184 SUPERFAMILY SSF51161 4 174 4.3E-43 T 28-03-2018 IPR011004 Trimeric LpxA-like AL549_RS22020 2bcf2d237ffd37b61a4a591148c987ae 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 129 1.9E-5 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS22020 2bcf2d237ffd37b61a4a591148c987ae 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 40 6.6E-6 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS22020 2bcf2d237ffd37b61a4a591148c987ae 184 Gene3D G3DSA:2.160.10.10 1 183 3.1E-39 T 28-03-2018 AL549_RS17110 e2e5c8746811fa0372fe4925592edd72 231 PRINTS PR00783 Major intrinsic protein family signature 136 154 3.8E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL549_RS17110 e2e5c8746811fa0372fe4925592edd72 231 PRINTS PR00783 Major intrinsic protein family signature 166 188 3.8E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL549_RS17110 e2e5c8746811fa0372fe4925592edd72 231 PRINTS PR00783 Major intrinsic protein family signature 79 98 3.8E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL549_RS17110 e2e5c8746811fa0372fe4925592edd72 231 PRINTS PR00783 Major intrinsic protein family signature 2 21 3.8E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL549_RS17110 e2e5c8746811fa0372fe4925592edd72 231 PRINTS PR00783 Major intrinsic protein family signature 42 66 3.8E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL549_RS17110 e2e5c8746811fa0372fe4925592edd72 231 PRINTS PR00783 Major intrinsic protein family signature 205 225 3.8E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL549_RS17110 e2e5c8746811fa0372fe4925592edd72 231 Pfam PF00230 Major intrinsic protein 2 222 1.8E-47 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL549_RS17110 e2e5c8746811fa0372fe4925592edd72 231 ProSitePatterns PS00221 MIP family signature. 60 68 - T 28-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL549_RS17110 e2e5c8746811fa0372fe4925592edd72 231 Gene3D G3DSA:1.20.1080.10 1 230 3.0E-70 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL549_RS17110 e2e5c8746811fa0372fe4925592edd72 231 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 4.4E-60 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL549_RS17110 e2e5c8746811fa0372fe4925592edd72 231 SUPERFAMILY SSF81338 2 227 2.49E-68 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL549_RS17110 e2e5c8746811fa0372fe4925592edd72 231 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 35.093 T 28-03-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 AL549_RS12380 3ff4f713e4dacc065b4a5943f40b5ae2 157 SUPERFAMILY SSF55781 5 145 3.93E-39 T 28-03-2018 IPR029016 GAF domain-like AL549_RS12380 3ff4f713e4dacc065b4a5943f40b5ae2 157 Pfam PF13185 GAF domain 31 145 1.3E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL549_RS12380 3ff4f713e4dacc065b4a5943f40b5ae2 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 28-03-2018 IPR000614 Free Met sulfoxide reductase conserved site AL549_RS12380 3ff4f713e4dacc065b4a5943f40b5ae2 157 Gene3D G3DSA:3.30.450.40 2 152 3.3E-20 T 28-03-2018 IPR029016 GAF domain-like AL549_RS00330 3e6705550c383618952d3492be9513d7 376 Gene3D G3DSA:1.10.287.470 141 191 4.5E-10 T 28-03-2018 AL549_RS00330 3e6705550c383618952d3492be9513d7 376 Gene3D G3DSA:2.40.50.100 62 140 1.6E-11 T 28-03-2018 AL549_RS00330 3e6705550c383618952d3492be9513d7 376 Pfam PF13533 Biotin-lipoyl like 64 111 1.6E-9 T 28-03-2018 AL549_RS00330 3e6705550c383618952d3492be9513d7 376 SUPERFAMILY SSF111369 140 184 3.27E-9 T 28-03-2018 AL549_RS00330 3e6705550c383618952d3492be9513d7 376 SUPERFAMILY SSF111369 61 111 3.27E-9 T 28-03-2018 AL549_RS00330 3e6705550c383618952d3492be9513d7 376 Gene3D G3DSA:1.20.1600.10 197 328 3.7E-8 T 28-03-2018 AL549_RS11130 89a104763fec5c31109c20271decb40f 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 203 7.2E-69 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AL549_RS11130 89a104763fec5c31109c20271decb40f 204 Gene3D G3DSA:3.40.50.880 2 204 1.4E-43 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS11130 89a104763fec5c31109c20271decb40f 204 PIRSF PIRSF000495 4 204 1.2E-64 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AL549_RS11130 89a104763fec5c31109c20271decb40f 204 Pfam PF00117 Glutamine amidotransferase class-I 8 202 2.1E-18 T 28-03-2018 IPR017926 Glutamine amidotransferase AL549_RS11130 89a104763fec5c31109c20271decb40f 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 204 33.561 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AL549_RS11130 89a104763fec5c31109c20271decb40f 204 SUPERFAMILY SSF52317 5 203 8.56E-53 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS23360 75d5a06dd7a45c1a49780d4d366341c5 124 SUPERFAMILY SSF110857 13 123 6.28E-33 T 28-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like AL549_RS23360 75d5a06dd7a45c1a49780d4d366341c5 124 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 14 121 1.0E-25 T 28-03-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AL549_RS23360 75d5a06dd7a45c1a49780d4d366341c5 124 Gene3D G3DSA:3.10.490.10 9 123 8.7E-32 T 28-03-2018 AL549_RS13125 0c657618dd7dffa1b7a0274ba61bfa8e 130 SUPERFAMILY SSF54427 1 123 3.26E-32 T 28-03-2018 IPR032710 NTF2-like domain AL549_RS13125 0c657618dd7dffa1b7a0274ba61bfa8e 130 Pfam PF12680 SnoaL-like domain 7 101 5.1E-11 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL549_RS13125 0c657618dd7dffa1b7a0274ba61bfa8e 130 Gene3D G3DSA:3.10.450.50 3 130 3.1E-17 T 28-03-2018 AL549_RS22730 de5c55fcb35df767bbe639700a5f59b8 555 Gene3D G3DSA:1.10.287.950 191 322 0.0084 T 28-03-2018 AL549_RS22730 de5c55fcb35df767bbe639700a5f59b8 555 SMART SM00304 224 278 2.5E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS22730 de5c55fcb35df767bbe639700a5f59b8 555 Gene3D G3DSA:3.30.450.20 27 190 1.5E-46 T 28-03-2018 AL549_RS22730 de5c55fcb35df767bbe639700a5f59b8 555 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 356 521 7.0E-39 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS22730 de5c55fcb35df767bbe639700a5f59b8 555 SUPERFAMILY SSF58104 246 555 3.01E-72 T 28-03-2018 AL549_RS22730 de5c55fcb35df767bbe639700a5f59b8 555 Gene3D G3DSA:1.10.287.950 323 526 1.4E-49 T 28-03-2018 AL549_RS22730 de5c55fcb35df767bbe639700a5f59b8 555 Pfam PF17200 Single Cache domain 2 45 188 2.1E-38 T 28-03-2018 IPR033480 Single Cache domain 2 AL549_RS22730 de5c55fcb35df767bbe639700a5f59b8 555 SMART SM01049 42 131 1.1E-32 T 28-03-2018 IPR033480 Single Cache domain 2 AL549_RS22730 de5c55fcb35df767bbe639700a5f59b8 555 SMART SM00283 293 554 4.8E-56 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS22730 de5c55fcb35df767bbe639700a5f59b8 555 Pfam PF00672 HAMP domain 225 274 3.3E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS01610 9dde0ec9fa8d45442b9ff46d5c9dbff2 902 Gene3D G3DSA:1.10.10.10 835 897 7.8E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01610 9dde0ec9fa8d45442b9ff46d5c9dbff2 902 SMART SM00421 836 893 7.1E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS01610 9dde0ec9fa8d45442b9ff46d5c9dbff2 902 SUPERFAMILY SSF48452 442 805 2.47E-155 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS01610 9dde0ec9fa8d45442b9ff46d5c9dbff2 902 Gene3D G3DSA:3.40.50.300 15 234 1.4E-4 T 28-03-2018 AL549_RS01610 9dde0ec9fa8d45442b9ff46d5c9dbff2 902 SUPERFAMILY SSF46894 831 894 9.18E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS01610 9dde0ec9fa8d45442b9ff46d5c9dbff2 902 Gene3D G3DSA:1.25.40.10 446 811 4.4E-43 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS01610 9dde0ec9fa8d45442b9ff46d5c9dbff2 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS01610 9dde0ec9fa8d45442b9ff46d5c9dbff2 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS01610 9dde0ec9fa8d45442b9ff46d5c9dbff2 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS01610 9dde0ec9fa8d45442b9ff46d5c9dbff2 902 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 40.729 T 28-03-2018 IPR023768 Transcriptional regulator HTH-type, MalT AL549_RS01610 9dde0ec9fa8d45442b9ff46d5c9dbff2 902 SUPERFAMILY SSF52540 25 230 8.11E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS01610 9dde0ec9fa8d45442b9ff46d5c9dbff2 902 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS01610 9dde0ec9fa8d45442b9ff46d5c9dbff2 902 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 892 1.8E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS01610 9dde0ec9fa8d45442b9ff46d5c9dbff2 902 Gene3D G3DSA:1.25.40.10 328 440 0.0054 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS08985 b296dfb4f4d0aaf11e871dcbd2699f5e 314 SUPERFAMILY SSF53271 69 306 8.14E-67 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AL549_RS08985 b296dfb4f4d0aaf11e871dcbd2699f5e 314 Gene3D G3DSA:3.40.50.2020 155 290 4.0E-41 T 28-03-2018 AL549_RS08985 b296dfb4f4d0aaf11e871dcbd2699f5e 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.3E-50 T 28-03-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AL549_RS08985 b296dfb4f4d0aaf11e871dcbd2699f5e 314 SMART SM01400 4 121 7.0E-78 T 28-03-2018 AL549_RS08985 b296dfb4f4d0aaf11e871dcbd2699f5e 314 Gene3D G3DSA:3.40.50.2020 1 154 1.6E-66 T 28-03-2018 AL549_RS08985 b296dfb4f4d0aaf11e871dcbd2699f5e 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 28-03-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AL549_RS08985 b296dfb4f4d0aaf11e871dcbd2699f5e 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 5.4E-125 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AL549_RS08985 b296dfb4f4d0aaf11e871dcbd2699f5e 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 2.7E-30 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AL549_RS08985 b296dfb4f4d0aaf11e871dcbd2699f5e 314 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.586 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AL549_RS02110 2445d8b77faa6ff06c3812d25d57f274 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 384 401 5.4E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS02110 2445d8b77faa6ff06c3812d25d57f274 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 297 309 5.4E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS02110 2445d8b77faa6ff06c3812d25d57f274 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 347 363 5.4E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS02110 2445d8b77faa6ff06c3812d25d57f274 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 230 240 5.4E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS02110 2445d8b77faa6ff06c3812d25d57f274 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 201 215 5.4E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS02110 2445d8b77faa6ff06c3812d25d57f274 404 Gene3D G3DSA:3.30.70.1170 145 210 4.3E-13 T 28-03-2018 AL549_RS02110 2445d8b77faa6ff06c3812d25d57f274 404 Pfam PF01189 16S rRNA methyltransferase RsmB/F 219 384 1.6E-43 T 28-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS02110 2445d8b77faa6ff06c3812d25d57f274 404 SUPERFAMILY SSF53335 117 402 7.86E-66 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS02110 2445d8b77faa6ff06c3812d25d57f274 404 Gene3D G3DSA:3.40.50.150 211 389 8.5E-49 T 28-03-2018 AL549_RS08010 89ed3cd4c715b7de387827bf3be68ac5 325 SUPERFAMILY SSF55174 17 67 1.06E-10 T 28-03-2018 AL549_RS08010 89ed3cd4c715b7de387827bf3be68ac5 325 Gene3D G3DSA:3.30.2350.10 83 316 1.4E-68 T 28-03-2018 AL549_RS08010 89ed3cd4c715b7de387827bf3be68ac5 325 Pfam PF01479 S4 domain 18 65 1.1E-8 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS08010 89ed3cd4c715b7de387827bf3be68ac5 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS08010 89ed3cd4c715b7de387827bf3be68ac5 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 6.2E-106 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS08010 89ed3cd4c715b7de387827bf3be68ac5 325 Gene3D G3DSA:3.10.290.10 2 76 3.4E-19 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS08010 89ed3cd4c715b7de387827bf3be68ac5 325 SMART SM00363 18 83 1.3E-8 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS08010 89ed3cd4c715b7de387827bf3be68ac5 325 SUPERFAMILY SSF55120 78 316 1.05E-79 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS08010 89ed3cd4c715b7de387827bf3be68ac5 325 Pfam PF00849 RNA pseudouridylate synthase 92 241 3.6E-30 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS06230 046d2aa9fe18456103ba75804eff2632 261 Gene3D G3DSA:3.90.1580.10 90 261 2.6E-42 T 28-03-2018 AL549_RS06230 046d2aa9fe18456103ba75804eff2632 261 Gene3D G3DSA:3.90.1580.10 30 89 7.6E-14 T 28-03-2018 AL549_RS06230 046d2aa9fe18456103ba75804eff2632 261 Pfam PF03781 Sulfatase-modifying factor enzyme 1 36 258 4.4E-47 T 28-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AL549_RS06230 046d2aa9fe18456103ba75804eff2632 261 SUPERFAMILY SSF56436 36 260 8.01E-59 T 28-03-2018 IPR016187 C-type lectin fold AL549_RS17415 69ddf80cd6db2542c6e3b8bb80c5030b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 7.9E-40 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL549_RS17415 69ddf80cd6db2542c6e3b8bb80c5030b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 7.9E-40 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL549_RS17415 69ddf80cd6db2542c6e3b8bb80c5030b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 7.9E-40 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL549_RS17415 69ddf80cd6db2542c6e3b8bb80c5030b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 7.9E-40 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL549_RS17415 69ddf80cd6db2542c6e3b8bb80c5030b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 7.9E-40 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL549_RS17415 69ddf80cd6db2542c6e3b8bb80c5030b 376 SUPERFAMILY SSF160544 250 355 2.49E-39 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL549_RS17415 69ddf80cd6db2542c6e3b8bb80c5030b 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 1.2E-134 T 28-03-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AL549_RS17415 69ddf80cd6db2542c6e3b8bb80c5030b 376 Gene3D G3DSA:3.40.1690.10 218 353 1.8E-55 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL549_RS17415 69ddf80cd6db2542c6e3b8bb80c5030b 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 1.3E-121 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL549_RS06060 a3025cc9a38dfc489318f5865630c595 322 SUPERFAMILY SSF56219 2 317 9.55E-36 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS06060 a3025cc9a38dfc489318f5865630c595 322 Gene3D G3DSA:3.60.10.10 1 322 3.9E-30 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS06060 a3025cc9a38dfc489318f5865630c595 322 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 29 273 4.4E-9 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS16225 aad4531297b77dc4f8a5a8b41c68f313 150 Pfam PF04217 Protein of unknown function, DUF412 9 146 8.5E-60 T 28-03-2018 IPR007334 Uncharacterised protein family UPF0208 AL549_RS16225 aad4531297b77dc4f8a5a8b41c68f313 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 37.537 T 28-03-2018 IPR007334 Uncharacterised protein family UPF0208 AL549_RS20470 d33c15a5ab32d13700518545595c1790 438 Gene3D G3DSA:3.40.440.10 1 151 6.4E-56 T 28-03-2018 AL549_RS20470 d33c15a5ab32d13700518545595c1790 438 Gene3D G3DSA:3.40.440.10 152 266 1.4E-26 T 28-03-2018 AL549_RS20470 d33c15a5ab32d13700518545595c1790 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 218.871 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL549_RS20470 d33c15a5ab32d13700518545595c1790 438 SUPERFAMILY SSF52540 3 436 8.29E-180 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20470 d33c15a5ab32d13700518545595c1790 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 2.0E-178 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL549_RS20470 d33c15a5ab32d13700518545595c1790 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 1.2E-192 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL549_RS20470 d33c15a5ab32d13700518545595c1790 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 28-03-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL549_RS20470 d33c15a5ab32d13700518545595c1790 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 28-03-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL549_RS20470 d33c15a5ab32d13700518545595c1790 438 Gene3D G3DSA:3.90.170.10 267 438 3.1E-64 T 28-03-2018 AL549_RS20470 d33c15a5ab32d13700518545595c1790 438 SMART SM00788 4 431 0.0 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL549_RS11185 6aaf9424680da56279a2fae610e16344 276 SUPERFAMILY SSF51735 1 247 1.34E-23 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS11185 6aaf9424680da56279a2fae610e16344 276 Pfam PF13460 NAD(P)H-binding 9 184 4.3E-13 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS11185 6aaf9424680da56279a2fae610e16344 276 Gene3D G3DSA:3.40.50.720 1 234 3.0E-17 T 28-03-2018 AL549_RS00150 4a02f91201161bf92edaa200778bd451 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 39 62 3.2E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS00150 4a02f91201161bf92edaa200778bd451 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 3.2E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS00150 4a02f91201161bf92edaa200778bd451 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 425 445 3.2E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS00150 4a02f91201161bf92edaa200778bd451 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 3.2E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS00150 4a02f91201161bf92edaa200778bd451 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 3.2E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS00150 4a02f91201161bf92edaa200778bd451 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 3.2E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS00150 4a02f91201161bf92edaa200778bd451 446 Gene3D G3DSA:3.90.1170.30 33 122 0.0054 T 28-03-2018 AL549_RS00150 4a02f91201161bf92edaa200778bd451 446 SUPERFAMILY SSF111369 78 140 1.96E-5 T 28-03-2018 AL549_RS00150 4a02f91201161bf92edaa200778bd451 446 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 34 446 1.6E-94 T 28-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AL549_RS00150 4a02f91201161bf92edaa200778bd451 446 Pfam PF13437 HlyD family secretion protein 302 413 6.8E-18 T 28-03-2018 AL549_RS00150 4a02f91201161bf92edaa200778bd451 446 Gene3D G3DSA:1.20.1600.10 145 426 3.0E-15 T 28-03-2018 AL549_RS00150 4a02f91201161bf92edaa200778bd451 446 Pfam PF13533 Biotin-lipoyl like 78 115 2.4E-6 T 28-03-2018 AL549_RS22470 3718840723c1d1d5c392c5b5131ddc4a 128 Gene3D G3DSA:3.10.290.10 2 104 3.3E-27 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS22470 3718840723c1d1d5c392c5b5131ddc4a 128 SMART SM00363 8 71 1.4E-12 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS22470 3718840723c1d1d5c392c5b5131ddc4a 128 SUPERFAMILY SSF55174 8 105 3.14E-32 T 28-03-2018 AL549_RS22470 3718840723c1d1d5c392c5b5131ddc4a 128 PIRSF PIRSF016821 5 128 2.9E-43 T 28-03-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 AL549_RS22470 3718840723c1d1d5c392c5b5131ddc4a 128 Pfam PF01479 S4 domain 8 53 1.7E-14 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS06965 68bdf16d1ed3a798108be1ddb827987e 198 Gene3D G3DSA:1.10.10.60 5 43 3.1E-10 T 28-03-2018 AL549_RS06965 68bdf16d1ed3a798108be1ddb827987e 198 SUPERFAMILY SSF48498 86 192 2.78E-16 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL549_RS06965 68bdf16d1ed3a798108be1ddb827987e 198 Gene3D G3DSA:1.10.260.40 44 65 5.0E-5 T 28-03-2018 AL549_RS06965 68bdf16d1ed3a798108be1ddb827987e 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.1E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS06965 68bdf16d1ed3a798108be1ddb827987e 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL549_RS06965 68bdf16d1ed3a798108be1ddb827987e 198 SUPERFAMILY SSF46689 5 77 9.75E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS06965 68bdf16d1ed3a798108be1ddb827987e 198 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 6.6E-74 T 28-03-2018 IPR017757 Transcriptional repressor BetI AL549_RS06965 68bdf16d1ed3a798108be1ddb827987e 198 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 192 2.7E-31 T 28-03-2018 AL549_RS06965 68bdf16d1ed3a798108be1ddb827987e 198 Gene3D G3DSA:1.10.357.10 66 197 1.7E-6 T 28-03-2018 AL549_RS06965 68bdf16d1ed3a798108be1ddb827987e 198 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 95.266 T 28-03-2018 IPR017757 Transcriptional repressor BetI AL549_RS18745 c3b40247a30c6fb04001ba8ed2407831 342 Pfam PF08402 TOBE domain 276 342 2.0E-7 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL549_RS18745 c3b40247a30c6fb04001ba8ed2407831 342 Gene3D G3DSA:3.40.50.300 1 295 6.7E-74 T 28-03-2018 AL549_RS18745 c3b40247a30c6fb04001ba8ed2407831 342 Pfam PF00005 ABC transporter 20 164 8.1E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS18745 c3b40247a30c6fb04001ba8ed2407831 342 SMART SM00382 29 214 3.2E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS18745 c3b40247a30c6fb04001ba8ed2407831 342 SUPERFAMILY SSF50331 263 342 3.53E-8 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL549_RS18745 c3b40247a30c6fb04001ba8ed2407831 342 SUPERFAMILY SSF52540 5 242 1.5E-81 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18745 c3b40247a30c6fb04001ba8ed2407831 342 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS05995 3f270e058a94b833b33fb3aef67cf92b 582 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 28-03-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL549_RS05995 3f270e058a94b833b33fb3aef67cf92b 582 SUPERFAMILY SSF52540 4 580 2.37E-218 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS05995 3f270e058a94b833b33fb3aef67cf92b 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 42.69 T 28-03-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL549_RS05995 3f270e058a94b833b33fb3aef67cf92b 582 Gene3D G3DSA:3.10.410.10 470 558 4.4E-33 T 28-03-2018 AL549_RS05995 3f270e058a94b833b33fb3aef67cf92b 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 28-03-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL549_RS05995 3f270e058a94b833b33fb3aef67cf92b 582 Pfam PF01268 Formate--tetrahydrofolate ligase 3 581 3.9E-240 T 28-03-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL549_RS05995 3f270e058a94b833b33fb3aef67cf92b 582 Gene3D G3DSA:3.40.50.300 253 468 1.8E-61 T 28-03-2018 AL549_RS05995 3f270e058a94b833b33fb3aef67cf92b 582 Gene3D G3DSA:3.40.50.300 12 252 1.0E-90 T 28-03-2018 AL549_RS12630 d1f36bf8cfebbbbb7a07f9f0637037e8 352 Gene3D G3DSA:1.20.950.20 117 337 1.4E-46 T 28-03-2018 AL549_RS12630 d1f36bf8cfebbbbb7a07f9f0637037e8 352 SUPERFAMILY SSF81342 119 331 7.77E-46 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL549_RS12630 d1f36bf8cfebbbbb7a07f9f0637037e8 352 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 122 326 1.0E-82 T 28-03-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 AL549_RS12630 d1f36bf8cfebbbbb7a07f9f0637037e8 352 Pfam PF01292 Prokaryotic cytochrome b561 125 306 1.3E-25 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AL549_RS20165 d36df16417c6568aea01c42c465fa206 179 Gene3D G3DSA:1.10.10.10 1 92 5.4E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS20165 d36df16417c6568aea01c42c465fa206 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 1.1E-15 T 28-03-2018 IPR005149 Transcription regulator PadR, N-terminal AL549_RS20165 d36df16417c6568aea01c42c465fa206 179 Pfam PF10400 Virulence activator alpha C-term 92 176 1.4E-15 T 28-03-2018 IPR018309 Transcription regulator PadR, C-terminal AL549_RS20165 d36df16417c6568aea01c42c465fa206 179 SUPERFAMILY SSF46785 3 176 6.27E-45 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS13870 49cb68873fa7babf41972374537f083c 44 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 2.0E-18 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS12165 61724e1a7313376e11ee90e2e1ddd27b 324 Gene3D G3DSA:1.10.287.470 108 199 1.6E-4 T 28-03-2018 AL549_RS12165 61724e1a7313376e11ee90e2e1ddd27b 324 Pfam PF13533 Biotin-lipoyl like 45 89 5.2E-10 T 28-03-2018 AL549_RS12165 61724e1a7313376e11ee90e2e1ddd27b 324 SUPERFAMILY SSF111369 129 156 1.96E-7 T 28-03-2018 AL549_RS12165 61724e1a7313376e11ee90e2e1ddd27b 324 SUPERFAMILY SSF111369 190 263 1.96E-7 T 28-03-2018 AL549_RS12165 61724e1a7313376e11ee90e2e1ddd27b 324 SUPERFAMILY SSF111369 38 95 1.96E-7 T 28-03-2018 AL549_RS12165 61724e1a7313376e11ee90e2e1ddd27b 324 Gene3D G3DSA:2.40.50.100 42 107 1.4E-11 T 28-03-2018 AL549_RS12165 61724e1a7313376e11ee90e2e1ddd27b 324 Pfam PF13437 HlyD family secretion protein 207 282 5.5E-6 T 28-03-2018 AL549_RS17345 ae13cdb976667f42406119f2f772fbcc 222 PIRSF PIRSF002764 1 222 1.9E-83 T 28-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AL549_RS17345 ae13cdb976667f42406119f2f772fbcc 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 6.0E-92 T 28-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AL549_RS17345 ae13cdb976667f42406119f2f772fbcc 222 Pfam PF03379 CcmB protein 5 219 4.4E-90 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17345 ae13cdb976667f42406119f2f772fbcc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 1.8E-69 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17345 ae13cdb976667f42406119f2f772fbcc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 1.8E-69 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17345 ae13cdb976667f42406119f2f772fbcc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 1.8E-69 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17345 ae13cdb976667f42406119f2f772fbcc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 1.8E-69 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17345 ae13cdb976667f42406119f2f772fbcc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 1.8E-69 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17345 ae13cdb976667f42406119f2f772fbcc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 1.8E-69 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS02160 1f96fcedbe213b0e78b40764bcce2a88 463 Pfam PF13533 Biotin-lipoyl like 79 108 1.9E-6 T 28-03-2018 AL549_RS02160 1f96fcedbe213b0e78b40764bcce2a88 463 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 463 1.8E-131 T 28-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AL549_RS02160 1f96fcedbe213b0e78b40764bcce2a88 463 Gene3D G3DSA:2.40.50.100 49 103 1.1E-4 T 28-03-2018 AL549_RS02160 1f96fcedbe213b0e78b40764bcce2a88 463 Pfam PF13437 HlyD family secretion protein 316 426 4.2E-18 T 28-03-2018 AL549_RS02160 1f96fcedbe213b0e78b40764bcce2a88 463 SUPERFAMILY SSF111369 66 138 4.05E-6 T 28-03-2018 AL549_RS02160 1f96fcedbe213b0e78b40764bcce2a88 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 9.4E-50 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS02160 1f96fcedbe213b0e78b40764bcce2a88 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 9.4E-50 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS02160 1f96fcedbe213b0e78b40764bcce2a88 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 9.4E-50 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS02160 1f96fcedbe213b0e78b40764bcce2a88 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 9.4E-50 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS02160 1f96fcedbe213b0e78b40764bcce2a88 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 9.4E-50 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS02160 1f96fcedbe213b0e78b40764bcce2a88 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 9.4E-50 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS02160 1f96fcedbe213b0e78b40764bcce2a88 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 9.4E-50 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS02160 1f96fcedbe213b0e78b40764bcce2a88 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 28-03-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AL549_RS02160 1f96fcedbe213b0e78b40764bcce2a88 463 SUPERFAMILY SSF56954 171 266 3.27E-5 T 28-03-2018 AL549_RS02160 1f96fcedbe213b0e78b40764bcce2a88 463 Gene3D G3DSA:1.20.1600.10 150 443 1.1E-21 T 28-03-2018 AL549_RS17515 e20e307fad3b8528dc91853a1f278283 700 Pfam PF07196 Flagellin hook IN motif 125 178 2.1E-9 T 28-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL549_RS17515 e20e307fad3b8528dc91853a1f278283 700 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 465 689 1.6E-54 T 28-03-2018 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 AL549_RS17515 e20e307fad3b8528dc91853a1f278283 700 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 3.4E-20 T 28-03-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 AL549_RS06655 2f3e6dda9df77fd4c07b16224d21ec8d 327 PIRSF PIRSF002867 1 325 1.3E-100 T 28-03-2018 IPR024181 Chemotaxis response regulator CheV AL549_RS06655 2f3e6dda9df77fd4c07b16224d21ec8d 327 Pfam PF00072 Response regulator receiver domain 195 313 7.1E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS06655 2f3e6dda9df77fd4c07b16224d21ec8d 327 Gene3D G3DSA:3.40.50.2300 186 321 1.7E-28 T 28-03-2018 AL549_RS06655 2f3e6dda9df77fd4c07b16224d21ec8d 327 SUPERFAMILY SSF52172 193 318 4.13E-28 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS06655 2f3e6dda9df77fd4c07b16224d21ec8d 327 SMART SM00448 193 318 4.7E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS06655 2f3e6dda9df77fd4c07b16224d21ec8d 327 SUPERFAMILY SSF50341 7 165 4.97E-33 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS06655 2f3e6dda9df77fd4c07b16224d21ec8d 327 Pfam PF01584 CheW-like domain 35 162 1.6E-30 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS06655 2f3e6dda9df77fd4c07b16224d21ec8d 327 SMART SM00260 14 160 1.6E-24 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS06655 2f3e6dda9df77fd4c07b16224d21ec8d 327 Gene3D G3DSA:2.40.50.180 44 108 6.5E-16 T 28-03-2018 AL549_RS06655 2f3e6dda9df77fd4c07b16224d21ec8d 327 Gene3D G3DSA:2.30.30.40 109 154 6.8E-12 T 28-03-2018 AL549_RS04420 2d338c8ea3464a7015bf2dd4a5e6b7cd 163 PRINTS PR00421 Thioredoxin family signature 69 78 2.0E-5 T 28-03-2018 AL549_RS04420 2d338c8ea3464a7015bf2dd4a5e6b7cd 163 PRINTS PR00421 Thioredoxin family signature 128 139 2.0E-5 T 28-03-2018 AL549_RS04420 2d338c8ea3464a7015bf2dd4a5e6b7cd 163 PRINTS PR00421 Thioredoxin family signature 61 69 2.0E-5 T 28-03-2018 AL549_RS04420 2d338c8ea3464a7015bf2dd4a5e6b7cd 163 ProSitePatterns PS00194 Thioredoxin family active site. 62 80 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL549_RS04420 2d338c8ea3464a7015bf2dd4a5e6b7cd 163 Pfam PF00578 AhpC/TSA family 38 144 1.6E-13 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL549_RS04420 2d338c8ea3464a7015bf2dd4a5e6b7cd 163 SUPERFAMILY SSF52833 6 152 2.03E-26 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS04420 2d338c8ea3464a7015bf2dd4a5e6b7cd 163 Gene3D G3DSA:3.40.30.10 29 155 1.4E-23 T 28-03-2018 AL549_RS15490 413df05700d588bdf15ce8068d4918d8 261 SUPERFAMILY SSF89392 100 202 4.71E-6 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL549_RS15490 413df05700d588bdf15ce8068d4918d8 261 Gene3D G3DSA:2.50.20.10 23 259 9.1E-64 T 28-03-2018 AL549_RS15490 413df05700d588bdf15ce8068d4918d8 261 Pfam PF17131 Outer membrane lipoprotein-sorting protein 76 259 1.9E-65 T 28-03-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein AL549_RS10190 97085a0ba0d9127803fa6a1674e0fb25 371 PIRSF PIRSF000148 1 371 1.4E-66 T 28-03-2018 AL549_RS10190 97085a0ba0d9127803fa6a1674e0fb25 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 28-03-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS10190 97085a0ba0d9127803fa6a1674e0fb25 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 2.1E-190 T 28-03-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS10190 97085a0ba0d9127803fa6a1674e0fb25 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 32.116 T 28-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS10190 97085a0ba0d9127803fa6a1674e0fb25 371 SUPERFAMILY SSF51735 1 146 1.04E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS10190 97085a0ba0d9127803fa6a1674e0fb25 371 Gene3D G3DSA:3.30.360.10 144 350 5.7E-61 T 28-03-2018 AL549_RS10190 97085a0ba0d9127803fa6a1674e0fb25 371 Gene3D G3DSA:3.40.50.720 1 143 2.8E-19 T 28-03-2018 AL549_RS10190 97085a0ba0d9127803fa6a1674e0fb25 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 120 1.0E-21 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL549_RS10190 97085a0ba0d9127803fa6a1674e0fb25 371 SUPERFAMILY SSF55347 133 354 4.76E-78 T 28-03-2018 AL549_RS10190 97085a0ba0d9127803fa6a1674e0fb25 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 2.6E-57 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL549_RS10190 97085a0ba0d9127803fa6a1674e0fb25 371 SMART SM00859 2 121 1.4E-23 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL549_RS02910 04cadb69b612654f91fe3210e44ae557 278 SUPERFAMILY SSF53474 4 261 1.56E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS02910 04cadb69b612654f91fe3210e44ae557 278 Pfam PF12697 Alpha/beta hydrolase family 42 258 8.2E-11 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS02910 04cadb69b612654f91fe3210e44ae557 278 Gene3D G3DSA:3.40.50.1820 2 262 3.0E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS06990 eebe5954811162b4b31315aa7baab910 172 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL549_RS06990 eebe5954811162b4b31315aa7baab910 172 Gene3D G3DSA:3.90.79.10 1 158 6.7E-17 T 28-03-2018 AL549_RS06990 eebe5954811162b4b31315aa7baab910 172 Pfam PF00293 NUDIX domain 23 143 5.8E-15 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL549_RS06990 eebe5954811162b4b31315aa7baab910 172 SUPERFAMILY SSF55811 9 142 2.03E-21 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL549_RS02410 a41e51e08b3c41c07effd58da53234d5 325 Gene3D G3DSA:3.40.1190.20 1 318 8.4E-50 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS02410 a41e51e08b3c41c07effd58da53234d5 325 SUPERFAMILY SSF53613 1 314 2.96E-66 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS02410 a41e51e08b3c41c07effd58da53234d5 325 Pfam PF00294 pfkB family carbohydrate kinase 1 314 8.0E-61 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AL549_RS02410 a41e51e08b3c41c07effd58da53234d5 325 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 269 282 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL549_RS19230 2555b39087b717e6c11310b006ead891 192 Gene3D G3DSA:1.10.1740.10 1 116 1.7E-30 T 28-03-2018 AL549_RS19230 2555b39087b717e6c11310b006ead891 192 SUPERFAMILY SSF88659 124 185 1.61E-17 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19230 2555b39087b717e6c11310b006ead891 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 28-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19230 2555b39087b717e6c11310b006ead891 192 Pfam PF08281 Sigma-70, region 4 134 181 3.6E-18 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19230 2555b39087b717e6c11310b006ead891 192 Pfam PF04542 Sigma-70 region 2 25 92 5.9E-18 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19230 2555b39087b717e6c11310b006ead891 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 2.7E-33 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19230 2555b39087b717e6c11310b006ead891 192 SUPERFAMILY SSF88946 2 107 4.24E-32 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS19230 2555b39087b717e6c11310b006ead891 192 Gene3D G3DSA:1.10.10.10 117 190 8.3E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS19230 2555b39087b717e6c11310b006ead891 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 2.8E-102 T 28-03-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS07880 02f35510c1918f3841e4ed957ba17894 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 8.0E-36 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS07880 02f35510c1918f3841e4ed957ba17894 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 8.3E-32 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS07880 02f35510c1918f3841e4ed957ba17894 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.607 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS07880 02f35510c1918f3841e4ed957ba17894 86 Gene3D G3DSA:1.20.58.110 1 86 2.0E-29 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS07880 02f35510c1918f3841e4ed957ba17894 86 SUPERFAMILY SSF46992 3 86 2.62E-32 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS07880 02f35510c1918f3841e4ed957ba17894 86 Pfam PF01649 Ribosomal protein S20 2 84 1.4E-27 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS15630 b1f2ff23669d211133c2101db009ebd3 195 Gene3D G3DSA:3.40.50.360 3 195 2.7E-39 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS15630 b1f2ff23669d211133c2101db009ebd3 195 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 31.541 T 28-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AL549_RS15630 b1f2ff23669d211133c2101db009ebd3 195 SUPERFAMILY SSF52218 1 193 6.21E-51 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS15630 b1f2ff23669d211133c2101db009ebd3 195 Pfam PF02525 Flavodoxin-like fold 3 190 1.9E-44 T 28-03-2018 IPR003680 Flavodoxin-like fold AL549_RS06000 958512d8f9d0bd220e4e2a5a93749480 404 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 49.57 T 28-03-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL549_RS06000 958512d8f9d0bd220e4e2a5a93749480 404 Pfam PF00483 Nucleotidyl transferase 6 272 6.2E-69 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL549_RS06000 958512d8f9d0bd220e4e2a5a93749480 404 Gene3D G3DSA:2.160.10.10 304 395 4.4E-8 T 28-03-2018 AL549_RS06000 958512d8f9d0bd220e4e2a5a93749480 404 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL549_RS06000 958512d8f9d0bd220e4e2a5a93749480 404 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 378 1.3E-153 T 28-03-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL549_RS06000 958512d8f9d0bd220e4e2a5a93749480 404 SUPERFAMILY SSF51161 296 396 4.71E-17 T 28-03-2018 IPR011004 Trimeric LpxA-like AL549_RS06000 958512d8f9d0bd220e4e2a5a93749480 404 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL549_RS06000 958512d8f9d0bd220e4e2a5a93749480 404 Gene3D G3DSA:3.90.550.10 4 303 2.7E-65 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS06000 958512d8f9d0bd220e4e2a5a93749480 404 SUPERFAMILY SSF53448 342 358 7.27E-79 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS06000 958512d8f9d0bd220e4e2a5a93749480 404 SUPERFAMILY SSF53448 3 275 7.27E-79 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS06000 958512d8f9d0bd220e4e2a5a93749480 404 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL549_RS16575 6851d7110dd52664c799cabd947f4b3d 237 Gene3D G3DSA:3.40.50.2300 1 131 4.9E-33 T 28-03-2018 AL549_RS16575 6851d7110dd52664c799cabd947f4b3d 237 SUPERFAMILY SSF52172 2 123 1.99E-36 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS16575 6851d7110dd52664c799cabd947f4b3d 237 SMART SM00862 158 234 3.4E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS16575 6851d7110dd52664c799cabd947f4b3d 237 SUPERFAMILY SSF46894 133 235 6.24E-27 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS16575 6851d7110dd52664c799cabd947f4b3d 237 Gene3D G3DSA:1.10.10.10 132 237 4.4E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS16575 6851d7110dd52664c799cabd947f4b3d 237 SMART SM00448 3 113 6.7E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS16575 6851d7110dd52664c799cabd947f4b3d 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 2.1E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS16575 6851d7110dd52664c799cabd947f4b3d 237 Pfam PF00072 Response regulator receiver domain 5 113 3.4E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS00375 c5eb81f458c138f2b86f3fea20b9351b 542 SMART SM00304 213 265 7.4E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS00375 c5eb81f458c138f2b86f3fea20b9351b 542 SMART SM00283 280 541 4.9E-68 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS00375 c5eb81f458c138f2b86f3fea20b9351b 542 Gene3D G3DSA:1.10.287.950 311 513 1.4E-48 T 28-03-2018 AL549_RS00375 c5eb81f458c138f2b86f3fea20b9351b 542 Pfam PF00672 HAMP domain 215 261 2.7E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS00375 c5eb81f458c138f2b86f3fea20b9351b 542 Gene3D G3DSA:1.10.287.950 78 310 1.4E-7 T 28-03-2018 AL549_RS00375 c5eb81f458c138f2b86f3fea20b9351b 542 SUPERFAMILY SSF58104 233 542 2.49E-72 T 28-03-2018 AL549_RS00375 c5eb81f458c138f2b86f3fea20b9351b 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 508 5.4E-42 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS00215 45f1ffcc3508e6a209e5922ef2cb8c5a 706 SUPERFAMILY SSF55781 341 515 2.14E-7 T 28-03-2018 IPR029016 GAF domain-like AL549_RS00215 45f1ffcc3508e6a209e5922ef2cb8c5a 706 Gene3D G3DSA:3.30.450.40 168 339 2.6E-9 T 28-03-2018 IPR029016 GAF domain-like AL549_RS00215 45f1ffcc3508e6a209e5922ef2cb8c5a 706 Gene3D G3DSA:3.30.70.270 521 699 3.5E-41 T 28-03-2018 AL549_RS00215 45f1ffcc3508e6a209e5922ef2cb8c5a 706 Gene3D G3DSA:3.30.450.40 340 520 2.3E-15 T 28-03-2018 IPR029016 GAF domain-like AL549_RS00215 45f1ffcc3508e6a209e5922ef2cb8c5a 706 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 528 696 1.5E-39 T 28-03-2018 IPR000160 GGDEF domain AL549_RS00215 45f1ffcc3508e6a209e5922ef2cb8c5a 706 Pfam PF00990 Diguanylate cyclase, GGDEF domain 533 694 4.2E-36 T 28-03-2018 IPR000160 GGDEF domain AL549_RS00215 45f1ffcc3508e6a209e5922ef2cb8c5a 706 SUPERFAMILY SSF55781 178 331 4.36E-7 T 28-03-2018 IPR029016 GAF domain-like AL549_RS00215 45f1ffcc3508e6a209e5922ef2cb8c5a 706 SUPERFAMILY SSF55073 537 699 6.2E-38 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS00215 45f1ffcc3508e6a209e5922ef2cb8c5a 706 SMART SM00267 521 698 4.2E-47 T 28-03-2018 IPR000160 GGDEF domain AL549_RS08225 31f9da8b405120ef39cadbdb44eabe21 168 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 2.2E-65 T 28-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AL549_RS08225 31f9da8b405120ef39cadbdb44eabe21 168 Pfam PF02082 Transcriptional regulator 1 83 1.3E-27 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type AL549_RS08225 31f9da8b405120ef39cadbdb44eabe21 168 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 168 53.435 T 28-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AL549_RS08225 31f9da8b405120ef39cadbdb44eabe21 168 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 1.2E-46 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type AL549_RS08225 31f9da8b405120ef39cadbdb44eabe21 168 SUPERFAMILY SSF46785 2 133 1.25E-35 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS08225 31f9da8b405120ef39cadbdb44eabe21 168 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 28-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AL549_RS08225 31f9da8b405120ef39cadbdb44eabe21 168 Gene3D G3DSA:1.10.10.10 1 140 1.7E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS18700 dd78b6da8a08fb932a61dbd1e633386c 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 325 7.0E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS18700 dd78b6da8a08fb932a61dbd1e633386c 328 SUPERFAMILY SSF161098 93 324 2.88E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS18700 dd78b6da8a08fb932a61dbd1e633386c 328 Gene3D G3DSA:1.10.3720.10 2 314 6.2E-33 T 28-03-2018 AL549_RS00515 b23759851d324520b245776f139a3a4f 92 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 89 2.4E-15 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL549_RS00515 b23759851d324520b245776f139a3a4f 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 1 89 1.8E-18 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL549_RS01705 2b76b646035e8583935f8e1c6681f7f2 670 SMART SM00642 142 548 6.8E-5 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS01705 2b76b646035e8583935f8e1c6681f7f2 670 Gene3D G3DSA:3.20.20.80 128 560 5.2E-77 T 28-03-2018 AL549_RS01705 2b76b646035e8583935f8e1c6681f7f2 670 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 19 96 1.0E-8 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 AL549_RS01705 2b76b646035e8583935f8e1c6681f7f2 670 SUPERFAMILY SSF51011 565 656 5.11E-15 T 28-03-2018 AL549_RS01705 2b76b646035e8583935f8e1c6681f7f2 670 SUPERFAMILY SSF81296 16 132 1.37E-23 T 28-03-2018 IPR014756 Immunoglobulin E-set AL549_RS01705 2b76b646035e8583935f8e1c6681f7f2 670 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 16 637 8.3E-200 T 28-03-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 AL549_RS01705 2b76b646035e8583935f8e1c6681f7f2 670 Pfam PF00128 Alpha amylase, catalytic domain 209 260 6.4E-5 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS01705 2b76b646035e8583935f8e1c6681f7f2 670 Gene3D G3DSA:2.60.40.1180 566 658 3.3E-12 T 28-03-2018 AL549_RS01705 2b76b646035e8583935f8e1c6681f7f2 670 SUPERFAMILY SSF51445 121 451 8.03E-97 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS01705 2b76b646035e8583935f8e1c6681f7f2 670 SUPERFAMILY SSF51445 480 551 8.03E-97 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS01705 2b76b646035e8583935f8e1c6681f7f2 670 Gene3D G3DSA:2.60.40.10 16 127 6.6E-19 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS09405 7653aea4e36a77de0c2c92bf7ef98ec5 165 Gene3D G3DSA:3.10.129.10 2 154 2.9E-19 T 28-03-2018 AL549_RS09405 7653aea4e36a77de0c2c92bf7ef98ec5 165 SUPERFAMILY SSF54637 10 156 4.48E-24 T 28-03-2018 IPR029069 HotDog domain AL549_RS09405 7653aea4e36a77de0c2c92bf7ef98ec5 165 Pfam PF14539 Domain of unknown function (DUF4442) 15 151 1.6E-24 T 28-03-2018 IPR027961 Protein of unknown function DUF4442 AL549_RS05035 621a4332fd733f3fe3d60d34ef548113 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 4.8E-16 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL549_RS05035 621a4332fd733f3fe3d60d34ef548113 205 SUPERFAMILY SSF47616 83 203 1.16E-23 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL549_RS05035 621a4332fd733f3fe3d60d34ef548113 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 133 199 1.1E-9 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL549_RS05035 621a4332fd733f3fe3d60d34ef548113 205 SUPERFAMILY SSF52833 1 88 2.24E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS05035 621a4332fd733f3fe3d60d34ef548113 205 Gene3D G3DSA:1.20.1050.10 93 204 1.5E-18 T 28-03-2018 AL549_RS05035 621a4332fd733f3fe3d60d34ef548113 205 Gene3D G3DSA:3.40.30.10 1 92 1.7E-26 T 28-03-2018 AL549_RS03375 fd7abec805e4f8634d13a944eaf186cd 674 Pfam PF00753 Metallo-beta-lactamase superfamily 124 341 1.7E-16 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS03375 fd7abec805e4f8634d13a944eaf186cd 674 SUPERFAMILY SSF56281 30 537 7.69E-110 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS03375 fd7abec805e4f8634d13a944eaf186cd 674 Gene3D G3DSA:1.25.40.10 461 543 2.4E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS03375 fd7abec805e4f8634d13a944eaf186cd 674 SUPERFAMILY SSF55718 545 668 2.33E-26 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AL549_RS03375 fd7abec805e4f8634d13a944eaf186cd 674 Pfam PF14864 Alkyl sulfatase C-terminal 544 667 2.0E-25 T 28-03-2018 IPR029229 Alkyl sulfatase, C-terminal AL549_RS03375 fd7abec805e4f8634d13a944eaf186cd 674 SMART SM00849 128 355 1.8E-14 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS03375 fd7abec805e4f8634d13a944eaf186cd 674 Gene3D G3DSA:3.60.15.10 108 381 2.4E-18 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS03375 fd7abec805e4f8634d13a944eaf186cd 674 Gene3D G3DSA:3.30.1050.10 544 674 4.0E-20 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AL549_RS03375 fd7abec805e4f8634d13a944eaf186cd 674 Pfam PF14863 Alkyl sulfatase dimerisation 397 536 4.5E-37 T 28-03-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 AL549_RS08240 c089f6bc9682123be14fb20a648c64b1 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 9.9E-27 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL549_RS08240 c089f6bc9682123be14fb20a648c64b1 107 SUPERFAMILY SSF89360 1 96 5.76E-35 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL549_RS08240 c089f6bc9682123be14fb20a648c64b1 107 Gene3D G3DSA:2.60.300.12 2 107 3.0E-40 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL549_RS08240 c089f6bc9682123be14fb20a648c64b1 107 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 3 107 4.0E-42 T 28-03-2018 IPR011298 FeS assembly scaffold SufA GO:0097428 AL549_RS08240 c089f6bc9682123be14fb20a648c64b1 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 5.2E-39 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AL549_RS08240 c089f6bc9682123be14fb20a648c64b1 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AL549_RS08240 c089f6bc9682123be14fb20a648c64b1 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 3.9E-58 T 28-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 AL549_RS12310 3dd71938985c91f8b37874a1cf1f9ad8 699 Pfam PF02563 Polysaccharide biosynthesis/export protein 25 96 7.7E-12 T 28-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AL549_RS12310 3dd71938985c91f8b37874a1cf1f9ad8 699 Gene3D G3DSA:3.30.1950.10 31 100 4.7E-11 T 28-03-2018 AL549_RS12310 3dd71938985c91f8b37874a1cf1f9ad8 699 Pfam PF10531 SLBB domain 104 148 1.1E-4 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS12310 3dd71938985c91f8b37874a1cf1f9ad8 699 Pfam PF10531 SLBB domain 395 445 5.4E-8 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS12310 3dd71938985c91f8b37874a1cf1f9ad8 699 Pfam PF10531 SLBB domain 589 632 1.4E-9 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS12310 3dd71938985c91f8b37874a1cf1f9ad8 699 Pfam PF10531 SLBB domain 494 537 8.1E-6 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS12310 3dd71938985c91f8b37874a1cf1f9ad8 699 Pfam PF10531 SLBB domain 299 351 5.7E-13 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS12310 3dd71938985c91f8b37874a1cf1f9ad8 699 Pfam PF10531 SLBB domain 211 252 5.8E-5 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS12310 3dd71938985c91f8b37874a1cf1f9ad8 699 Gene3D G3DSA:3.10.560.10 101 182 2.0E-14 T 28-03-2018 AL549_RS12310 3dd71938985c91f8b37874a1cf1f9ad8 699 Gene3D G3DSA:3.10.560.10 577 671 8.9E-19 T 28-03-2018 AL549_RS12310 3dd71938985c91f8b37874a1cf1f9ad8 699 Gene3D G3DSA:3.10.560.10 481 576 1.0E-16 T 28-03-2018 AL549_RS12310 3dd71938985c91f8b37874a1cf1f9ad8 699 Gene3D G3DSA:3.10.560.10 288 378 1.8E-18 T 28-03-2018 AL549_RS12310 3dd71938985c91f8b37874a1cf1f9ad8 699 Gene3D G3DSA:3.10.560.10 197 287 8.1E-15 T 28-03-2018 AL549_RS12310 3dd71938985c91f8b37874a1cf1f9ad8 699 Gene3D G3DSA:3.10.560.10 384 473 5.0E-13 T 28-03-2018 AL549_RS15455 15b8e40592d0eb1b30acae17bcd609d0 214 SUPERFAMILY SSF52499 4 205 5.1E-24 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL549_RS15455 15b8e40592d0eb1b30acae17bcd609d0 214 Gene3D G3DSA:3.40.50.850 4 210 1.4E-26 T 28-03-2018 AL549_RS15455 15b8e40592d0eb1b30acae17bcd609d0 214 Pfam PF00857 Isochorismatase family 9 204 3.1E-21 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL549_RS04880 3bc4bc301dc65464b985b1294823e4de 727 Gene3D G3DSA:3.90.70.10 31 143 4.6E-6 T 28-03-2018 AL549_RS04880 3bc4bc301dc65464b985b1294823e4de 727 SUPERFAMILY SSF52540 474 717 3.07E-88 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS04880 3bc4bc301dc65464b985b1294823e4de 727 SMART SM00382 507 693 2.7E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS04880 3bc4bc301dc65464b985b1294823e4de 727 Pfam PF03412 Peptidase C39 family 49 148 1.0E-5 T 28-03-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 AL549_RS04880 3bc4bc301dc65464b985b1294823e4de 727 Gene3D G3DSA:3.40.50.300 469 723 3.8E-76 T 28-03-2018 AL549_RS04880 3bc4bc301dc65464b985b1294823e4de 727 Pfam PF00664 ABC transporter transmembrane region 171 437 1.9E-46 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS04880 3bc4bc301dc65464b985b1294823e4de 727 ProSitePatterns PS00211 ABC transporters family signature. 619 633 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS04880 3bc4bc301dc65464b985b1294823e4de 727 SUPERFAMILY SSF90123 156 467 1.57E-63 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS04880 3bc4bc301dc65464b985b1294823e4de 727 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 45 718 2.0E-242 T 28-03-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AL549_RS04880 3bc4bc301dc65464b985b1294823e4de 727 Gene3D G3DSA:1.20.1560.10 144 468 8.2E-50 T 28-03-2018 AL549_RS04880 3bc4bc301dc65464b985b1294823e4de 727 Pfam PF00005 ABC transporter 499 647 5.6E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS07215 3673026eb28f2cc6f68ab3c23038e46f 215 SUPERFAMILY SSF56784 1 212 3.36E-50 T 28-03-2018 IPR023214 HAD-like domain AL549_RS07215 3673026eb28f2cc6f68ab3c23038e46f 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 6.7E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS07215 3673026eb28f2cc6f68ab3c23038e46f 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 6.7E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS07215 3673026eb28f2cc6f68ab3c23038e46f 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 6.7E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS07215 3673026eb28f2cc6f68ab3c23038e46f 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 6.7E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS07215 3673026eb28f2cc6f68ab3c23038e46f 215 Gene3D G3DSA:3.40.50.1000 1 194 2.4E-35 T 28-03-2018 IPR023214 HAD-like domain AL549_RS07215 3673026eb28f2cc6f68ab3c23038e46f 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 1.2E-32 T 28-03-2018 IPR023214 HAD-like domain AL549_RS07215 3673026eb28f2cc6f68ab3c23038e46f 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 75 182 3.6E-16 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS17465 bb09505b8b0df50fbb584c5c5edbe5fb 440 Gene3D G3DSA:3.40.50.300 93 364 5.3E-86 T 28-03-2018 AL549_RS17465 bb09505b8b0df50fbb584c5c5edbe5fb 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 1.8E-73 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL549_RS17465 bb09505b8b0df50fbb584c5c5edbe5fb 440 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 6.8E-194 T 28-03-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL549_RS17465 bb09505b8b0df50fbb584c5c5edbe5fb 440 SUPERFAMILY SSF52540 94 362 1.97E-96 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS17465 bb09505b8b0df50fbb584c5c5edbe5fb 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 22 437 6.2E-174 T 28-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL549_RS17465 bb09505b8b0df50fbb584c5c5edbe5fb 440 SMART SM00382 158 342 5.4E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS17465 bb09505b8b0df50fbb584c5c5edbe5fb 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL549_RS05030 9a35431115dd68948cf2c52a87c27129 195 Gene3D G3DSA:1.10.357.10 58 190 2.1E-15 T 28-03-2018 AL549_RS05030 9a35431115dd68948cf2c52a87c27129 195 SUPERFAMILY SSF46689 2 64 3.13E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS05030 9a35431115dd68948cf2c52a87c27129 195 SUPERFAMILY SSF48498 81 174 9.54E-15 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL549_RS05030 9a35431115dd68948cf2c52a87c27129 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 6.5E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS05030 9a35431115dd68948cf2c52a87c27129 195 Gene3D G3DSA:1.10.10.60 1 57 8.5E-11 T 28-03-2018 AL549_RS21705 ce00f22e27760f7a3a1ae565c199abff 753 Pfam PF03924 CHASE domain 133 235 2.2E-14 T 28-03-2018 IPR006189 CHASE domain AL549_RS21705 ce00f22e27760f7a3a1ae565c199abff 753 Pfam PF00563 EAL domain 503 735 1.4E-73 T 28-03-2018 IPR001633 EAL domain AL549_RS21705 ce00f22e27760f7a3a1ae565c199abff 753 SMART SM00267 316 487 3.7E-51 T 28-03-2018 IPR000160 GGDEF domain AL549_RS21705 ce00f22e27760f7a3a1ae565c199abff 753 SMART SM00052 497 740 5.3E-107 T 28-03-2018 IPR001633 EAL domain AL549_RS21705 ce00f22e27760f7a3a1ae565c199abff 753 Pfam PF00990 Diguanylate cyclase, GGDEF domain 327 483 6.9E-42 T 28-03-2018 IPR000160 GGDEF domain AL549_RS21705 ce00f22e27760f7a3a1ae565c199abff 753 Gene3D G3DSA:3.20.20.450 495 752 3.3E-94 T 28-03-2018 IPR001633 EAL domain AL549_RS21705 ce00f22e27760f7a3a1ae565c199abff 753 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 323 485 1.4E-38 T 28-03-2018 IPR000160 GGDEF domain AL549_RS21705 ce00f22e27760f7a3a1ae565c199abff 753 SUPERFAMILY SSF55073 332 488 1.49E-45 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS21705 ce00f22e27760f7a3a1ae565c199abff 753 Gene3D G3DSA:3.30.70.270 321 494 1.1E-52 T 28-03-2018 AL549_RS21705 ce00f22e27760f7a3a1ae565c199abff 753 SUPERFAMILY SSF141868 503 745 2.35E-87 T 28-03-2018 IPR001633 EAL domain AL549_RS21705 ce00f22e27760f7a3a1ae565c199abff 753 SMART SM01079 71 248 7.8E-38 T 28-03-2018 IPR006189 CHASE domain AL549_RS05075 4da8a502bddfba3b0cb767e6ffcc76e6 264 SMART SM00331 11 237 5.8E-31 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL549_RS05075 4da8a502bddfba3b0cb767e6ffcc76e6 264 Gene3D G3DSA:3.60.40.10 6 238 1.4E-37 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL549_RS05075 4da8a502bddfba3b0cb767e6ffcc76e6 264 Pfam PF13672 Protein phosphatase 2C 20 206 1.2E-16 T 28-03-2018 AL549_RS05075 4da8a502bddfba3b0cb767e6ffcc76e6 264 SUPERFAMILY SSF81606 8 237 2.62E-60 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL549_RS05075 4da8a502bddfba3b0cb767e6ffcc76e6 264 SMART SM00332 1 235 3.8E-16 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL549_RS21310 e503f8f6a8b5dde6bb8759a45863c6bb 316 SUPERFAMILY SSF47823 16 107 1.04E-12 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal AL549_RS21310 e503f8f6a8b5dde6bb8759a45863c6bb 316 SUPERFAMILY SSF56349 116 302 2.65E-52 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL549_RS21310 e503f8f6a8b5dde6bb8759a45863c6bb 316 Pfam PF00589 Phage integrase family 122 290 3.5E-49 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL549_RS21310 e503f8f6a8b5dde6bb8759a45863c6bb 316 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 3.8E-20 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AL549_RS21310 e503f8f6a8b5dde6bb8759a45863c6bb 316 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 19 306 3.3E-107 T 28-03-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 AL549_RS21310 e503f8f6a8b5dde6bb8759a45863c6bb 316 Gene3D G3DSA:1.10.443.10 122 298 1.7E-42 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL549_RS21310 e503f8f6a8b5dde6bb8759a45863c6bb 316 Gene3D G3DSA:1.10.150.130 11 121 1.9E-20 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AL549_RS21310 e503f8f6a8b5dde6bb8759a45863c6bb 316 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 304 55.372 T 28-03-2018 IPR023009 Tyrosine recombinase XerC/XerD AL549_RS23170 69f2e278c1a446ed028377629479460a 179 PIRSF PIRSF002161 1 179 1.9E-64 T 28-03-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23170 69f2e278c1a446ed028377629479460a 179 Pfam PF00281 Ribosomal protein L5 24 80 8.6E-29 T 28-03-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23170 69f2e278c1a446ed028377629479460a 179 SUPERFAMILY SSF55282 4 179 1.2E-77 T 28-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23170 69f2e278c1a446ed028377629479460a 179 Gene3D G3DSA:3.30.1440.10 1 179 2.8E-79 T 28-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23170 69f2e278c1a446ed028377629479460a 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 28-03-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23170 69f2e278c1a446ed028377629479460a 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.728 T 28-03-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23170 69f2e278c1a446ed028377629479460a 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.8E-40 T 28-03-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS18910 95107612df2359430d3698f2564fc1a5 561 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL549_RS18910 95107612df2359430d3698f2564fc1a5 561 SUPERFAMILY SSF52540 169 558 4.59E-94 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18910 95107612df2359430d3698f2564fc1a5 561 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 4 559 3.6E-256 T 28-03-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 AL549_RS18910 95107612df2359430d3698f2564fc1a5 561 Pfam PF00437 Type II/IV secretion system protein 188 455 4.7E-88 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL549_RS18910 95107612df2359430d3698f2564fc1a5 561 Gene3D G3DSA:3.30.450.90 150 288 8.1E-47 T 28-03-2018 AL549_RS18910 95107612df2359430d3698f2564fc1a5 561 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 37 140 1.2E-19 T 28-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 AL549_RS18910 95107612df2359430d3698f2564fc1a5 561 SUPERFAMILY SSF160246 2 139 4.97E-33 T 28-03-2018 AL549_RS18910 95107612df2359430d3698f2564fc1a5 561 Gene3D G3DSA:3.40.50.300 289 560 8.2E-59 T 28-03-2018 AL549_RS10305 6ad4058944443b5dd1ff482a84357960 676 Pfam PF00271 Helicase conserved C-terminal domain 440 545 1.9E-17 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS10305 6ad4058944443b5dd1ff482a84357960 676 Gene3D G3DSA:3.40.50.300 11 415 2.1E-32 T 28-03-2018 AL549_RS10305 6ad4058944443b5dd1ff482a84357960 676 Gene3D G3DSA:3.40.50.300 416 590 6.4E-31 T 28-03-2018 AL549_RS10305 6ad4058944443b5dd1ff482a84357960 676 Pfam PF12344 Ultra-violet resistance protein B 553 595 2.6E-20 T 28-03-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain AL549_RS10305 6ad4058944443b5dd1ff482a84357960 676 SUPERFAMILY SSF52540 4 416 1.27E-138 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS10305 6ad4058944443b5dd1ff482a84357960 676 SMART SM00490 461 547 1.3E-19 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS10305 6ad4058944443b5dd1ff482a84357960 676 SUPERFAMILY SSF46600 629 672 2.88E-11 T 28-03-2018 IPR001943 UVR domain GO:0005515 AL549_RS10305 6ad4058944443b5dd1ff482a84357960 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AL549_RS10305 6ad4058944443b5dd1ff482a84357960 676 Pfam PF02151 UvrB/uvrC motif 636 671 1.9E-8 T 28-03-2018 IPR001943 UVR domain GO:0005515 AL549_RS10305 6ad4058944443b5dd1ff482a84357960 676 SMART SM00487 9 426 1.8E-27 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS10305 6ad4058944443b5dd1ff482a84357960 676 Pfam PF04851 Type III restriction enzyme, res subunit 16 138 1.2E-8 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL549_RS10305 6ad4058944443b5dd1ff482a84357960 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 43.161 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AL549_RS10305 6ad4058944443b5dd1ff482a84357960 676 SUPERFAMILY SSF52540 460 584 4.51E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS10305 6ad4058944443b5dd1ff482a84357960 676 SUPERFAMILY SSF52540 37 82 4.51E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS10305 6ad4058944443b5dd1ff482a84357960 676 Gene3D G3DSA:4.10.860.10 616 676 6.0E-18 T 28-03-2018 IPR001943 UVR domain GO:0005515 AL549_RS06705 1ad02d98b5d883c0e9ca865721021cd1 114 Pfam PF04237 YjbR 17 103 1.1E-24 T 28-03-2018 IPR007351 Uncharacterised protein YjbR AL549_RS06705 1ad02d98b5d883c0e9ca865721021cd1 114 SUPERFAMILY SSF142906 1 114 4.71E-37 T 28-03-2018 AL549_RS17275 e9c03cf4eca84765523a39f67f22c6b7 705 Gene3D G3DSA:1.10.1040.10 493 592 3.5E-22 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL549_RS17275 e9c03cf4eca84765523a39f67f22c6b7 705 Gene3D G3DSA:1.10.1040.10 610 702 1.8E-20 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL549_RS17275 e9c03cf4eca84765523a39f67f22c6b7 705 SUPERFAMILY SSF48179 494 593 2.64E-27 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL549_RS17275 e9c03cf4eca84765523a39f67f22c6b7 705 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 703 54.147 T 28-03-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL549_RS17275 e9c03cf4eca84765523a39f67f22c6b7 705 SUPERFAMILY SSF51735 313 491 3.1E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS17275 e9c03cf4eca84765523a39f67f22c6b7 705 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 313 491 7.2E-55 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL549_RS17275 e9c03cf4eca84765523a39f67f22c6b7 705 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AL549_RS17275 e9c03cf4eca84765523a39f67f22c6b7 705 Gene3D G3DSA:3.90.226.10 2 205 2.8E-53 T 28-03-2018 AL549_RS17275 e9c03cf4eca84765523a39f67f22c6b7 705 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 587 7.4E-24 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL549_RS17275 e9c03cf4eca84765523a39f67f22c6b7 705 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 616 690 4.2E-5 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL549_RS17275 e9c03cf4eca84765523a39f67f22c6b7 705 Gene3D G3DSA:3.40.50.720 254 492 1.9E-54 T 28-03-2018 AL549_RS17275 e9c03cf4eca84765523a39f67f22c6b7 705 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 516 - T 28-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL549_RS17275 e9c03cf4eca84765523a39f67f22c6b7 705 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 214 2.1E-39 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL549_RS17275 e9c03cf4eca84765523a39f67f22c6b7 705 SUPERFAMILY SSF52096 3 302 6.9E-67 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS17275 e9c03cf4eca84765523a39f67f22c6b7 705 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 703 0.0 T 28-03-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL549_RS17275 e9c03cf4eca84765523a39f67f22c6b7 705 SUPERFAMILY SSF48179 610 704 2.55E-27 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL549_RS02415 122cf8336e5660d5ce51fcb2164256f3 470 Gene3D G3DSA:3.20.20.140 3 88 7.3E-25 T 28-03-2018 AL549_RS02415 122cf8336e5660d5ce51fcb2164256f3 470 SUPERFAMILY SSF51556 2 466 9.52E-183 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL549_RS02415 122cf8336e5660d5ce51fcb2164256f3 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 468 50.18 T 28-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AL549_RS02415 122cf8336e5660d5ce51fcb2164256f3 470 Gene3D G3DSA:3.20.20.140 89 467 4.8E-154 T 28-03-2018 AL549_RS02415 122cf8336e5660d5ce51fcb2164256f3 470 Pfam PF02614 Glucuronate isomerase 1 466 1.3E-229 T 28-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AL549_RS09395 fcb3cd07b87e6501306994e8a415b39f 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 3.1E-63 T 28-03-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL549_RS09395 fcb3cd07b87e6501306994e8a415b39f 556 SUPERFAMILY SSF52374 11 337 2.17E-103 T 28-03-2018 AL549_RS09395 fcb3cd07b87e6501306994e8a415b39f 556 Gene3D G3DSA:3.40.50.620 8 41 0.0084 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS09395 fcb3cd07b87e6501306994e8a415b39f 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.196 T 28-03-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 AL549_RS09395 fcb3cd07b87e6501306994e8a415b39f 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 3.5E-10 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL549_RS09395 fcb3cd07b87e6501306994e8a415b39f 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 3.5E-10 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL549_RS09395 fcb3cd07b87e6501306994e8a415b39f 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 3.5E-10 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL549_RS09395 fcb3cd07b87e6501306994e8a415b39f 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 3.5E-10 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL549_RS09395 fcb3cd07b87e6501306994e8a415b39f 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS09395 fcb3cd07b87e6501306994e8a415b39f 556 Gene3D G3DSA:3.40.50.620 42 153 2.8E-40 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS09395 fcb3cd07b87e6501306994e8a415b39f 556 Gene3D G3DSA:3.40.50.620 154 260 3.8E-21 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS09395 fcb3cd07b87e6501306994e8a415b39f 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 4.8E-128 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AL549_RS09395 fcb3cd07b87e6501306994e8a415b39f 556 Gene3D G3DSA:2.40.240.10 465 548 6.0E-34 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL549_RS09395 fcb3cd07b87e6501306994e8a415b39f 556 SUPERFAMILY SSF50715 340 548 1.57E-78 T 28-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL549_RS09395 fcb3cd07b87e6501306994e8a415b39f 556 Gene3D G3DSA:2.40.240.10 344 464 1.2E-48 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL549_RS09395 fcb3cd07b87e6501306994e8a415b39f 556 Gene3D G3DSA:1.10.1160.10 261 338 1.4E-36 T 28-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AL549_RS09395 fcb3cd07b87e6501306994e8a415b39f 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 1.2E-295 T 28-03-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL549_RS08750 5244b902bde75b1999e4dd8112840d48 269 Gene3D G3DSA:3.40.190.10 126 269 1.7E-48 T 28-03-2018 AL549_RS08750 5244b902bde75b1999e4dd8112840d48 269 Pfam PF03180 NLPA lipoprotein 33 269 3.9E-98 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL549_RS08750 5244b902bde75b1999e4dd8112840d48 269 Gene3D G3DSA:3.40.190.10 32 125 1.7E-21 T 28-03-2018 AL549_RS08750 5244b902bde75b1999e4dd8112840d48 269 SUPERFAMILY SSF53850 32 269 1.21E-80 T 28-03-2018 AL549_RS08750 5244b902bde75b1999e4dd8112840d48 269 PIRSF PIRSF002854 1 269 1.7E-100 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL549_RS08750 5244b902bde75b1999e4dd8112840d48 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 1.6E-124 T 28-03-2018 IPR004872 Lipoprotein NlpA family AL549_RS18900 23922e6b1639dbb8dd20aab479cbfb80 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 42 127 2.0E-27 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AL549_RS18900 23922e6b1639dbb8dd20aab479cbfb80 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 5.8E-60 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL549_RS18900 23922e6b1639dbb8dd20aab479cbfb80 295 Gene3D G3DSA:3.90.1170.20 7 154 8.8E-45 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AL549_RS18900 23922e6b1639dbb8dd20aab479cbfb80 295 SUPERFAMILY SSF54675 13 128 1.1E-33 T 28-03-2018 AL549_RS18900 23922e6b1639dbb8dd20aab479cbfb80 295 SUPERFAMILY SSF51690 130 294 2.83E-60 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL549_RS18900 23922e6b1639dbb8dd20aab479cbfb80 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 1.2E-96 T 28-03-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 AL549_RS18900 23922e6b1639dbb8dd20aab479cbfb80 295 Gene3D G3DSA:3.20.20.70 155 284 3.2E-40 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS18900 23922e6b1639dbb8dd20aab479cbfb80 295 PIRSF PIRSF006250 16 295 2.4E-103 T 28-03-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AL549_RS11465 aaa07e8f326795634c2dcc671c175ff7 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 5.3E-49 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL549_RS11465 aaa07e8f326795634c2dcc671c175ff7 233 SMART SM00363 1 59 2.4E-5 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS11465 aaa07e8f326795634c2dcc671c175ff7 233 SUPERFAMILY SSF55120 60 228 2.56E-43 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS11465 aaa07e8f326795634c2dcc671c175ff7 233 Pfam PF01479 S4 domain 1 44 2.7E-8 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS11465 aaa07e8f326795634c2dcc671c175ff7 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL549_RS11465 aaa07e8f326795634c2dcc671c175ff7 233 SUPERFAMILY SSF55174 1 56 1.15E-11 T 28-03-2018 AL549_RS11465 aaa07e8f326795634c2dcc671c175ff7 233 Gene3D G3DSA:3.10.290.10 1 71 2.5E-11 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS11465 aaa07e8f326795634c2dcc671c175ff7 233 Gene3D G3DSA:3.30.2350.10 72 230 1.1E-34 T 28-03-2018 AL549_RS11465 aaa07e8f326795634c2dcc671c175ff7 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 3.7E-17 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS22105 4b1f7ca007d01806197fa10b822762fa 595 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 3.9E-33 T 28-03-2018 AL549_RS22105 4b1f7ca007d01806197fa10b822762fa 595 Pfam PF16188 C-terminal region of peptidase_M24 534 593 1.5E-21 T 28-03-2018 IPR032416 Peptidase M24, C-terminal domain AL549_RS22105 4b1f7ca007d01806197fa10b822762fa 595 Gene3D G3DSA:3.40.350.10 155 296 5.8E-14 T 28-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL549_RS22105 4b1f7ca007d01806197fa10b822762fa 595 Pfam PF00557 Metallopeptidase family M24 310 524 1.4E-43 T 28-03-2018 IPR000994 Peptidase M24 AL549_RS22105 4b1f7ca007d01806197fa10b822762fa 595 Gene3D G3DSA:3.90.230.10 300 553 5.8E-62 T 28-03-2018 AL549_RS22105 4b1f7ca007d01806197fa10b822762fa 595 SUPERFAMILY SSF55920 303 559 2.75E-55 T 28-03-2018 IPR000994 Peptidase M24 AL549_RS22105 4b1f7ca007d01806197fa10b822762fa 595 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 131 2.7E-18 T 28-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 AL549_RS22105 4b1f7ca007d01806197fa10b822762fa 595 SUPERFAMILY SSF53092 7 131 7.32E-19 T 28-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal AL549_RS22105 4b1f7ca007d01806197fa10b822762fa 595 Gene3D G3DSA:3.40.350.10 1 146 9.0E-41 T 28-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL549_RS18990 70b0e8473650207165668febda6e13f6 952 SUPERFAMILY SSF63411 738 942 7.81E-41 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL549_RS18990 70b0e8473650207165668febda6e13f6 952 Pfam PF05193 Peptidase M16 inactive domain 220 394 8.8E-30 T 28-03-2018 IPR007863 Peptidase M16, C-terminal AL549_RS18990 70b0e8473650207165668febda6e13f6 952 Pfam PF05193 Peptidase M16 inactive domain 687 858 9.3E-20 T 28-03-2018 IPR007863 Peptidase M16, C-terminal AL549_RS18990 70b0e8473650207165668febda6e13f6 952 Gene3D G3DSA:3.30.830.10 49 273 6.7E-59 T 28-03-2018 AL549_RS18990 70b0e8473650207165668febda6e13f6 952 SUPERFAMILY SSF63411 519 721 3.83E-48 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL549_RS18990 70b0e8473650207165668febda6e13f6 952 Gene3D G3DSA:3.30.830.10 742 948 1.3E-28 T 28-03-2018 AL549_RS18990 70b0e8473650207165668febda6e13f6 952 Gene3D G3DSA:3.30.830.10 276 477 8.5E-29 T 28-03-2018 AL549_RS18990 70b0e8473650207165668febda6e13f6 952 Pfam PF00675 Insulinase (Peptidase family M16) 541 654 1.7E-16 T 28-03-2018 IPR011765 Peptidase M16, N-terminal AL549_RS18990 70b0e8473650207165668febda6e13f6 952 Pfam PF00675 Insulinase (Peptidase family M16) 63 178 2.0E-17 T 28-03-2018 IPR011765 Peptidase M16, N-terminal AL549_RS18990 70b0e8473650207165668febda6e13f6 952 Gene3D G3DSA:3.30.830.10 491 725 5.3E-45 T 28-03-2018 AL549_RS18990 70b0e8473650207165668febda6e13f6 952 SUPERFAMILY SSF63411 50 259 1.37E-55 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL549_RS18990 70b0e8473650207165668febda6e13f6 952 SUPERFAMILY SSF63411 281 469 6.17E-30 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL549_RS04115 b7e8966dde9839b7dc96598ecf212836 384 SUPERFAMILY SSF117281 195 376 8.24E-29 T 28-03-2018 AL549_RS04115 b7e8966dde9839b7dc96598ecf212836 384 SUPERFAMILY SSF117281 46 158 8.24E-29 T 28-03-2018 AL549_RS04115 b7e8966dde9839b7dc96598ecf212836 384 Gene3D G3DSA:2.120.10.80 191 382 4.8E-13 T 28-03-2018 IPR015915 Kelch-type beta propeller GO:0005515 AL549_RS04115 b7e8966dde9839b7dc96598ecf212836 384 Gene3D G3DSA:2.120.10.80 14 190 1.1E-19 T 28-03-2018 IPR015915 Kelch-type beta propeller GO:0005515 AL549_RS04115 b7e8966dde9839b7dc96598ecf212836 384 Pfam PF01344 Kelch motif 81 129 9.7E-9 T 28-03-2018 IPR006652 Kelch repeat type 1 GO:0005515 AL549_RS04115 b7e8966dde9839b7dc96598ecf212836 384 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 28 373 5.1E-132 T 28-03-2018 IPR019936 Mutatrotase, YjhT-like AL549_RS04115 b7e8966dde9839b7dc96598ecf212836 384 Hamap MF_01195 N-acetylneuraminate epimerase [nanM]. 7 384 45.57 T 28-03-2018 IPR019936 Mutatrotase, YjhT-like AL549_RS05460 0999e9212e5902c6987297a85bde8ec5 212 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 134 209 6.5E-19 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL549_RS05460 0999e9212e5902c6987297a85bde8ec5 212 Gene3D G3DSA:3.30.2420.10 136 212 7.1E-19 T 28-03-2018 AL549_RS05460 0999e9212e5902c6987297a85bde8ec5 212 PRINTS PR01374 Gram-negative bacterial tonB protein signature 60 70 2.4E-16 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL549_RS05460 0999e9212e5902c6987297a85bde8ec5 212 PRINTS PR01374 Gram-negative bacterial tonB protein signature 148 166 2.4E-16 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL549_RS05460 0999e9212e5902c6987297a85bde8ec5 212 PRINTS PR01374 Gram-negative bacterial tonB protein signature 127 148 2.4E-16 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL549_RS05460 0999e9212e5902c6987297a85bde8ec5 212 PRINTS PR01374 Gram-negative bacterial tonB protein signature 167 184 2.4E-16 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL549_RS05460 0999e9212e5902c6987297a85bde8ec5 212 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 133 209 6.5E-22 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL549_RS05460 0999e9212e5902c6987297a85bde8ec5 212 SUPERFAMILY SSF74653 124 202 5.1E-24 T 28-03-2018 AL549_RS08380 1d73e13ed2c428bc22a6c8b6d3a021bf 328 PIRSF PIRSF004930 5 328 4.1E-112 T 28-03-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 AL549_RS08380 1d73e13ed2c428bc22a6c8b6d3a021bf 328 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 18 211 6.4E-60 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 AL549_RS08380 1d73e13ed2c428bc22a6c8b6d3a021bf 328 Pfam PF03481 Putative GTP-binding controlling metal-binding 205 325 3.1E-16 T 28-03-2018 IPR005145 Putative GTP-binding controlling metal-binding domain AL549_RS08380 1d73e13ed2c428bc22a6c8b6d3a021bf 328 SUPERFAMILY SSF55821 20 215 5.19E-62 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL549_RS08380 1d73e13ed2c428bc22a6c8b6d3a021bf 328 Pfam PF01300 Telomere recombination 28 203 2.0E-56 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 AL549_RS08380 1d73e13ed2c428bc22a6c8b6d3a021bf 328 Gene3D G3DSA:3.90.870.10 8 219 1.1E-73 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL549_RS13140 296b848e906aef0892f777da99075e0a 53 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 3.4E-12 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS09030 896699582d671f97604705947ff71b86 553 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 4.4E-22 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL549_RS09030 896699582d671f97604705947ff71b86 553 PRINTS PR01607 Apyrase family signature 487 506 1.3E-51 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS09030 896699582d671f97604705947ff71b86 553 PRINTS PR01607 Apyrase family signature 36 54 1.3E-51 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS09030 896699582d671f97604705947ff71b86 553 PRINTS PR01607 Apyrase family signature 211 228 1.3E-51 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS09030 896699582d671f97604705947ff71b86 553 PRINTS PR01607 Apyrase family signature 242 265 1.3E-51 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS09030 896699582d671f97604705947ff71b86 553 PRINTS PR01607 Apyrase family signature 287 307 1.3E-51 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS09030 896699582d671f97604705947ff71b86 553 PRINTS PR01607 Apyrase family signature 420 443 1.3E-51 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS09030 896699582d671f97604705947ff71b86 553 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS09030 896699582d671f97604705947ff71b86 553 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS09030 896699582d671f97604705947ff71b86 553 SUPERFAMILY SSF56300 31 364 9.59E-97 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS09030 896699582d671f97604705947ff71b86 553 Gene3D G3DSA:3.90.780.10 366 552 1.1E-45 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS09030 896699582d671f97604705947ff71b86 553 SUPERFAMILY SSF55816 366 543 2.49E-51 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS09030 896699582d671f97604705947ff71b86 553 Gene3D G3DSA:3.60.21.10 30 365 8.6E-82 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS09030 896699582d671f97604705947ff71b86 553 Pfam PF02872 5'-nucleotidase, C-terminal domain 367 512 5.1E-34 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS09015 91326f05c42dad11a461d416475e16c7 127 PIRSF PIRSF005610 1 121 3.1E-16 T 28-03-2018 IPR007360 Invasion gene expression up-regulator, SirB AL549_RS09015 91326f05c42dad11a461d416475e16c7 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 1.1E-37 T 28-03-2018 IPR007360 Invasion gene expression up-regulator, SirB AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 SUPERFAMILY SSF52009 293 412 7.72E-26 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 Pfam PF01590 GAF domain 17 153 1.1E-15 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 172 730 4.9E-134 T 28-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 Gene3D G3DSA:3.30.450.40 1 161 1.0E-31 T 28-03-2018 IPR029016 GAF domain-like AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 7.1E-23 T 28-03-2018 AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 7.1E-23 T 28-03-2018 AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 7.1E-23 T 28-03-2018 AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 7.1E-23 T 28-03-2018 AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 319 391 7.0E-15 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 SUPERFAMILY SSF55781 2 158 1.79E-33 T 28-03-2018 IPR029016 GAF domain-like AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 Gene3D G3DSA:3.20.20.60 417 738 7.3E-87 T 28-03-2018 AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 SUPERFAMILY SSF47831 203 311 2.62E-26 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 Gene3D G3DSA:3.50.30.10 311 407 1.8E-18 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 SMART SM00065 17 163 1.6E-22 T 28-03-2018 IPR003018 GAF domain GO:0005515 AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 SUPERFAMILY SSF51621 422 713 6.28E-98 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 421 706 1.0E-95 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 5.5E-22 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL549_RS07840 84ee5620193ea5a31e81a29599f17e26 748 Gene3D G3DSA:1.10.274.10 197 310 2.5E-25 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL549_RS17745 b35520bfc929594b1a9cc88938a99471 114 PIRSF PIRSF039144 3 114 2.9E-58 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL549_RS17745 b35520bfc929594b1a9cc88938a99471 114 SUPERFAMILY SSF54913 3 114 2.38E-47 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL549_RS17745 b35520bfc929594b1a9cc88938a99471 114 Pfam PF00543 Nitrogen regulatory protein P-II 6 107 1.5E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL549_RS17745 b35520bfc929594b1a9cc88938a99471 114 PRINTS PR00340 P-II protein signature 25 43 5.9E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL549_RS17745 b35520bfc929594b1a9cc88938a99471 114 PRINTS PR00340 P-II protein signature 54 77 5.9E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL549_RS17745 b35520bfc929594b1a9cc88938a99471 114 PRINTS PR00340 P-II protein signature 85 105 5.9E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL549_RS17745 b35520bfc929594b1a9cc88938a99471 114 PRINTS PR00340 P-II protein signature 4 19 5.9E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL549_RS17745 b35520bfc929594b1a9cc88938a99471 114 SMART SM00938 6 107 8.5E-70 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL549_RS17745 b35520bfc929594b1a9cc88938a99471 114 ProSitePatterns PS00496 P-II protein uridylation site. 48 53 - T 28-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AL549_RS17745 b35520bfc929594b1a9cc88938a99471 114 Gene3D G3DSA:3.30.70.120 1 110 1.2E-50 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL549_RS17745 b35520bfc929594b1a9cc88938a99471 114 ProSitePatterns PS00638 P-II protein C-terminal region signature. 85 98 - T 28-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AL549_RS22355 f6f2d999c5b52835405ee4a486ccd14a 347 Gene3D G3DSA:3.20.20.70 1 337 5.8E-155 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS22355 f6f2d999c5b52835405ee4a486ccd14a 347 SMART SM01004 9 333 1.9E-245 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL549_RS22355 f6f2d999c5b52835405ee4a486ccd14a 347 SUPERFAMILY SSF51569 7 335 3.66E-145 T 28-03-2018 AL549_RS22355 f6f2d999c5b52835405ee4a486ccd14a 347 PIRSF PIRSF001415 2 336 1.3E-152 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL549_RS22355 f6f2d999c5b52835405ee4a486ccd14a 347 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 28-03-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL549_RS22355 f6f2d999c5b52835405ee4a486ccd14a 347 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 1.5E-142 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL549_RS22355 f6f2d999c5b52835405ee4a486ccd14a 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 1.2E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL549_RS22355 f6f2d999c5b52835405ee4a486ccd14a 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 1.2E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL549_RS22355 f6f2d999c5b52835405ee4a486ccd14a 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.2E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL549_RS22355 f6f2d999c5b52835405ee4a486ccd14a 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 1.2E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL549_RS22355 f6f2d999c5b52835405ee4a486ccd14a 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 1.2E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL549_RS22355 f6f2d999c5b52835405ee4a486ccd14a 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 1.2E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL549_RS09570 11d83c64ed825b9aa5189b28cc0b89e1 639 SMART SM00487 17 310 0.008 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS09570 11d83c64ed825b9aa5189b28cc0b89e1 639 Gene3D G3DSA:3.40.50.300 447 638 5.8E-12 T 28-03-2018 AL549_RS09570 11d83c64ed825b9aa5189b28cc0b89e1 639 Pfam PF04851 Type III restriction enzyme, res subunit 19 251 1.6E-5 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL549_RS09570 11d83c64ed825b9aa5189b28cc0b89e1 639 SUPERFAMILY SSF52540 41 74 3.62E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS09570 11d83c64ed825b9aa5189b28cc0b89e1 639 SUPERFAMILY SSF52540 478 600 3.62E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS09570 11d83c64ed825b9aa5189b28cc0b89e1 639 SMART SM00491 477 606 1.4E-45 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL549_RS09570 11d83c64ed825b9aa5189b28cc0b89e1 639 SUPERFAMILY SSF52540 14 237 1.73E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS09570 11d83c64ed825b9aa5189b28cc0b89e1 639 Gene3D G3DSA:3.40.50.300 18 422 4.2E-29 T 28-03-2018 AL549_RS09570 11d83c64ed825b9aa5189b28cc0b89e1 639 Pfam PF13307 Helicase C-terminal domain 462 619 4.7E-35 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL549_RS02615 ee28e6fe207b58421602370e96cd7ad3 237 SUPERFAMILY SSF46689 136 186 3.36E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS02615 ee28e6fe207b58421602370e96cd7ad3 237 SUPERFAMILY SSF51182 16 156 7.95E-10 T 28-03-2018 IPR011051 RmlC-like cupin domain AL549_RS02615 ee28e6fe207b58421602370e96cd7ad3 237 SMART SM00342 152 235 7.0E-33 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS02615 ee28e6fe207b58421602370e96cd7ad3 237 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 204 219 3.3E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS02615 ee28e6fe207b58421602370e96cd7ad3 237 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 219 235 3.3E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS02615 ee28e6fe207b58421602370e96cd7ad3 237 Gene3D G3DSA:2.60.120.10 5 87 1.4E-7 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS02615 ee28e6fe207b58421602370e96cd7ad3 237 Gene3D G3DSA:1.10.10.60 121 191 4.1E-14 T 28-03-2018 AL549_RS02615 ee28e6fe207b58421602370e96cd7ad3 237 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 189 231 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL549_RS02615 ee28e6fe207b58421602370e96cd7ad3 237 Gene3D G3DSA:1.10.10.60 192 237 2.7E-15 T 28-03-2018 AL549_RS02615 ee28e6fe207b58421602370e96cd7ad3 237 Pfam PF12833 Helix-turn-helix domain 158 236 1.7E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS02615 ee28e6fe207b58421602370e96cd7ad3 237 SUPERFAMILY SSF46689 188 235 3.85E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS00045 71f1f4465f52b8b9ed2f7cbb78c86c0f 387 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 224 381 2.2E-51 T 28-03-2018 IPR000160 GGDEF domain AL549_RS00045 71f1f4465f52b8b9ed2f7cbb78c86c0f 387 SMART SM00267 214 384 3.4E-57 T 28-03-2018 IPR000160 GGDEF domain AL549_RS00045 71f1f4465f52b8b9ed2f7cbb78c86c0f 387 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 380 3.8E-45 T 28-03-2018 IPR000160 GGDEF domain AL549_RS00045 71f1f4465f52b8b9ed2f7cbb78c86c0f 387 Gene3D G3DSA:3.30.70.270 213 385 4.3E-51 T 28-03-2018 AL549_RS00045 71f1f4465f52b8b9ed2f7cbb78c86c0f 387 SUPERFAMILY SSF55073 230 383 1.8E-48 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS08145 cf436ed6d99b8d3c874fc57d1d05bcb5 250 SUPERFAMILY SSF110395 4 247 2.62E-71 T 28-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 AL549_RS08145 cf436ed6d99b8d3c874fc57d1d05bcb5 250 Gene3D G3DSA:3.20.20.380 2 250 5.1E-87 T 28-03-2018 AL549_RS08145 cf436ed6d99b8d3c874fc57d1d05bcb5 250 Pfam PF03932 CutC family 4 205 5.1E-83 T 28-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 AL549_RS08145 cf436ed6d99b8d3c874fc57d1d05bcb5 250 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 247 41.748 T 28-03-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 AL549_RS03670 89221186effaf53f84c9cd4036f1b8a8 374 SUPERFAMILY SSF52266 153 367 1.47E-15 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL549_RS03670 89221186effaf53f84c9cd4036f1b8a8 374 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 159 336 1.3E-10 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL549_RS03670 89221186effaf53f84c9cd4036f1b8a8 374 Gene3D G3DSA:3.40.50.1110 152 372 2.1E-18 T 28-03-2018 AL549_RS03420 ea9a6703335c4d21ff7f3fbc37a574d3 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.6E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03420 ea9a6703335c4d21ff7f3fbc37a574d3 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 60 6.6E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03420 ea9a6703335c4d21ff7f3fbc37a574d3 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 60 71 6.6E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03420 ea9a6703335c4d21ff7f3fbc37a574d3 304 Gene3D G3DSA:3.40.190.10 196 273 2.7E-6 T 28-03-2018 AL549_RS03420 ea9a6703335c4d21ff7f3fbc37a574d3 304 SUPERFAMILY SSF53850 109 299 5.97E-20 T 28-03-2018 AL549_RS03420 ea9a6703335c4d21ff7f3fbc37a574d3 304 Gene3D G3DSA:1.10.10.10 17 104 4.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03420 ea9a6703335c4d21ff7f3fbc37a574d3 304 Gene3D G3DSA:3.40.190.10 111 195 1.2E-10 T 28-03-2018 AL549_RS03420 ea9a6703335c4d21ff7f3fbc37a574d3 304 Pfam PF03466 LysR substrate binding domain 109 296 9.7E-20 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS03420 ea9a6703335c4d21ff7f3fbc37a574d3 304 SUPERFAMILY SSF46785 19 103 1.09E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03420 ea9a6703335c4d21ff7f3fbc37a574d3 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 82 3.2E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS09845 5f8a847fdabff315fe4f29bd1049e1b0 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.3E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL549_RS09845 5f8a847fdabff315fe4f29bd1049e1b0 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.3E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL549_RS09845 5f8a847fdabff315fe4f29bd1049e1b0 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.3E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL549_RS09845 5f8a847fdabff315fe4f29bd1049e1b0 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.3E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL549_RS09845 5f8a847fdabff315fe4f29bd1049e1b0 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.3E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL549_RS09845 5f8a847fdabff315fe4f29bd1049e1b0 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 2.1E-107 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL549_RS09845 5f8a847fdabff315fe4f29bd1049e1b0 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 28-03-2018 IPR033135 ClpP, histidine active site AL549_RS09845 5f8a847fdabff315fe4f29bd1049e1b0 208 Pfam PF00574 Clp protease 25 205 8.4E-90 T 28-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AL549_RS09845 5f8a847fdabff315fe4f29bd1049e1b0 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 28-03-2018 IPR018215 ClpP, Ser active site AL549_RS09845 5f8a847fdabff315fe4f29bd1049e1b0 208 Gene3D G3DSA:3.90.226.10 15 207 9.5E-49 T 28-03-2018 AL549_RS09845 5f8a847fdabff315fe4f29bd1049e1b0 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.494 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL549_RS09845 5f8a847fdabff315fe4f29bd1049e1b0 208 SUPERFAMILY SSF52096 23 207 1.24E-75 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS20025 22de8bb308754f76ff54799f54ae0f64 139 SUPERFAMILY SSF111038 1 139 1.29E-49 T 28-03-2018 IPR001602 Uncharacterised protein family UPF0047 AL549_RS20025 22de8bb308754f76ff54799f54ae0f64 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 139 2.1E-45 T 28-03-2018 IPR001602 Uncharacterised protein family UPF0047 AL549_RS20025 22de8bb308754f76ff54799f54ae0f64 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 4.5E-39 T 28-03-2018 IPR001602 Uncharacterised protein family UPF0047 AL549_RS20025 22de8bb308754f76ff54799f54ae0f64 139 PIRSF PIRSF004681 1 139 2.3E-46 T 28-03-2018 IPR001602 Uncharacterised protein family UPF0047 AL549_RS20025 22de8bb308754f76ff54799f54ae0f64 139 Gene3D G3DSA:2.60.120.460 1 139 1.8E-60 T 28-03-2018 IPR001602 Uncharacterised protein family UPF0047 AL549_RS18950 1f6bdb102b13686bdf9423d6fe055583 182 Pfam PF05239 PRC-barrel domain 103 168 5.8E-12 T 28-03-2018 IPR027275 PRC-barrel domain AL549_RS18950 1f6bdb102b13686bdf9423d6fe055583 182 SUPERFAMILY SSF50447 12 100 1.59E-23 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL549_RS18950 1f6bdb102b13686bdf9423d6fe055583 182 Gene3D G3DSA:2.40.30.60 12 100 3.5E-26 T 28-03-2018 IPR002676 RimM protein GO:0006364 AL549_RS18950 1f6bdb102b13686bdf9423d6fe055583 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 1.1E-55 T 28-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AL549_RS18950 1f6bdb102b13686bdf9423d6fe055583 182 Gene3D G3DSA:2.30.30.240 102 177 7.5E-22 T 28-03-2018 AL549_RS18950 1f6bdb102b13686bdf9423d6fe055583 182 SUPERFAMILY SSF50346 106 182 2.35E-20 T 28-03-2018 IPR011033 PRC-barrel-like AL549_RS18950 1f6bdb102b13686bdf9423d6fe055583 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.08 T 28-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AL549_RS18950 1f6bdb102b13686bdf9423d6fe055583 182 Pfam PF01782 RimM N-terminal domain 15 95 2.7E-24 T 28-03-2018 IPR002676 RimM protein GO:0006364 AL549_RS04055 bb3ab64e03ff84747775209c4b4243e0 402 PIRSF PIRSF000429 1 402 9.2E-131 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL549_RS04055 bb3ab64e03ff84747775209c4b4243e0 402 Gene3D G3DSA:3.40.47.10 1 271 2.3E-59 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS04055 bb3ab64e03ff84747775209c4b4243e0 402 Pfam PF00108 Thiolase, N-terminal domain 4 262 5.6E-99 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL549_RS04055 bb3ab64e03ff84747775209c4b4243e0 402 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AL549_RS04055 bb3ab64e03ff84747775209c4b4243e0 402 SUPERFAMILY SSF53901 4 270 1.75E-82 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS04055 bb3ab64e03ff84747775209c4b4243e0 402 SUPERFAMILY SSF53901 271 399 7.68E-40 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS04055 bb3ab64e03ff84747775209c4b4243e0 402 Pfam PF02803 Thiolase, C-terminal domain 271 399 1.6E-45 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL549_RS04055 bb3ab64e03ff84747775209c4b4243e0 402 Gene3D G3DSA:3.40.47.10 272 398 1.5E-31 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS04055 bb3ab64e03ff84747775209c4b4243e0 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AL549_RS04055 bb3ab64e03ff84747775209c4b4243e0 402 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AL549_RS04055 bb3ab64e03ff84747775209c4b4243e0 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 2.9E-147 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL549_RS22405 5e5ed1b58d9ab480ca82e00fdbfc5560 348 SMART SM00388 129 194 2.2E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS22405 5e5ed1b58d9ab480ca82e00fdbfc5560 348 Pfam PF00989 PAS fold 8 109 5.1E-13 T 28-03-2018 IPR013767 PAS fold GO:0006355 AL549_RS22405 5e5ed1b58d9ab480ca82e00fdbfc5560 348 Gene3D G3DSA:3.30.450.20 1 124 1.2E-14 T 28-03-2018 AL549_RS22405 5e5ed1b58d9ab480ca82e00fdbfc5560 348 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 120 2.7E-6 T 28-03-2018 IPR000014 PAS domain AL549_RS22405 5e5ed1b58d9ab480ca82e00fdbfc5560 348 SUPERFAMILY SSF55874 196 347 4.19E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS22405 5e5ed1b58d9ab480ca82e00fdbfc5560 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 1.5E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS22405 5e5ed1b58d9ab480ca82e00fdbfc5560 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 1.5E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS22405 5e5ed1b58d9ab480ca82e00fdbfc5560 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.5E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS22405 5e5ed1b58d9ab480ca82e00fdbfc5560 348 SUPERFAMILY SSF55785 8 101 1.19E-9 T 28-03-2018 IPR000014 PAS domain AL549_RS22405 5e5ed1b58d9ab480ca82e00fdbfc5560 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 2.4E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS22405 5e5ed1b58d9ab480ca82e00fdbfc5560 348 Gene3D G3DSA:3.30.565.10 190 348 4.8E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS22405 5e5ed1b58d9ab480ca82e00fdbfc5560 348 SMART SM00387 233 348 7.2E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS22405 5e5ed1b58d9ab480ca82e00fdbfc5560 348 SMART SM00091 4 72 2.2E-8 T 28-03-2018 IPR000014 PAS domain AL549_RS22405 5e5ed1b58d9ab480ca82e00fdbfc5560 348 Gene3D G3DSA:1.10.287.130 125 188 8.3E-14 T 28-03-2018 AL549_RS22405 5e5ed1b58d9ab480ca82e00fdbfc5560 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 2.2E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS22405 5e5ed1b58d9ab480ca82e00fdbfc5560 348 SUPERFAMILY SSF47384 125 190 1.67E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS19590 448f7aee3ce5b5ef381bc1fadee4cd40 331 SMART SM00354 1 71 2.5E-29 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS19590 448f7aee3ce5b5ef381bc1fadee4cd40 331 Gene3D G3DSA:1.10.260.40 2 54 2.8E-20 T 28-03-2018 AL549_RS19590 448f7aee3ce5b5ef381bc1fadee4cd40 331 SUPERFAMILY SSF53822 61 315 2.78E-67 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS19590 448f7aee3ce5b5ef381bc1fadee4cd40 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.2E-17 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS19590 448f7aee3ce5b5ef381bc1fadee4cd40 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.4E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS19590 448f7aee3ce5b5ef381bc1fadee4cd40 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.4E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS19590 448f7aee3ce5b5ef381bc1fadee4cd40 331 Gene3D G3DSA:3.40.50.2300 55 174 2.1E-29 T 28-03-2018 AL549_RS19590 448f7aee3ce5b5ef381bc1fadee4cd40 331 SUPERFAMILY SSF47413 2 59 2.28E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS19590 448f7aee3ce5b5ef381bc1fadee4cd40 331 Gene3D G3DSA:3.40.50.2300 175 312 1.1E-37 T 28-03-2018 AL549_RS19590 448f7aee3ce5b5ef381bc1fadee4cd40 331 Pfam PF13377 Periplasmic binding protein-like domain 168 313 8.5E-30 T 28-03-2018 AL549_RS03385 66bc7121b8711b70da2763314dc416d9 343 SUPERFAMILY SSF111369 66 216 7.32E-9 T 28-03-2018 AL549_RS03385 66bc7121b8711b70da2763314dc416d9 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 257 7.2E-10 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL549_RS03385 66bc7121b8711b70da2763314dc416d9 343 Gene3D G3DSA:1.20.1600.10 51 277 6.0E-16 T 28-03-2018 AL549_RS01090 ef0cdf766d913ff8f4ac0f02ec3de0fb 277 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 76 117 - T 28-03-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 AL549_RS01090 ef0cdf766d913ff8f4ac0f02ec3de0fb 277 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 23 271 4.5E-97 T 28-03-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 AL549_RS01090 ef0cdf766d913ff8f4ac0f02ec3de0fb 277 PIRSF PIRSF000477 2 273 7.3E-103 T 28-03-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 AL549_RS01090 ef0cdf766d913ff8f4ac0f02ec3de0fb 277 Gene3D G3DSA:3.40.50.1580 1 273 4.1E-59 T 28-03-2018 AL549_RS01090 ef0cdf766d913ff8f4ac0f02ec3de0fb 277 SUPERFAMILY SSF53167 4 272 1.24E-81 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL549_RS01090 ef0cdf766d913ff8f4ac0f02ec3de0fb 277 Pfam PF01048 Phosphorylase superfamily 23 271 4.6E-42 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL549_RS01090 ef0cdf766d913ff8f4ac0f02ec3de0fb 277 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 23 271 1.7E-124 T 28-03-2018 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL549_RS04705 49e1c2a755e0a1e1f0d139a6ccefff6b 92 Pfam PF03889 Domain of unknown function 20 57 9.1E-23 T 28-03-2018 IPR005589 Protein of unknown function DUF331 AL549_RS02685 4d037e51b08a7f484eebc2749b1c78d1 718 Gene3D G3DSA:2.40.170.20 168 718 7.1E-45 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL549_RS02685 4d037e51b08a7f484eebc2749b1c78d1 718 Pfam PF00593 TonB dependent receptor 246 717 1.2E-25 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL549_RS02685 4d037e51b08a7f484eebc2749b1c78d1 718 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 701 718 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL549_RS02685 4d037e51b08a7f484eebc2749b1c78d1 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 151 1.3E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL549_RS02685 4d037e51b08a7f484eebc2749b1c78d1 718 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 718 2.2E-83 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL549_RS02685 4d037e51b08a7f484eebc2749b1c78d1 718 Gene3D G3DSA:2.170.130.10 25 158 3.9E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL549_RS02685 4d037e51b08a7f484eebc2749b1c78d1 718 SUPERFAMILY SSF56935 35 424 2.6E-85 T 28-03-2018 AL549_RS02685 4d037e51b08a7f484eebc2749b1c78d1 718 SUPERFAMILY SSF56935 455 718 2.6E-85 T 28-03-2018 AL549_RS17620 62df2c2fc10a6630d4cd538e809206af 484 Pfam PF01435 Peptidase family M48 70 252 5.1E-28 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL549_RS17620 62df2c2fc10a6630d4cd538e809206af 484 Gene3D G3DSA:1.25.40.10 365 480 2.0E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS17620 62df2c2fc10a6630d4cd538e809206af 484 SMART SM00028 307 340 56.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS17620 62df2c2fc10a6630d4cd538e809206af 484 SMART SM00028 341 374 20.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS17620 62df2c2fc10a6630d4cd538e809206af 484 SMART SM00028 426 459 12.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS17620 62df2c2fc10a6630d4cd538e809206af 484 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 2 483 42.001 T 28-03-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 AL549_RS17620 62df2c2fc10a6630d4cd538e809206af 484 SUPERFAMILY SSF48452 311 455 3.25E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS17620 62df2c2fc10a6630d4cd538e809206af 484 Pfam PF14559 Tetratricopeptide repeat 352 416 2.2E-10 T 28-03-2018 AL549_RS17620 62df2c2fc10a6630d4cd538e809206af 484 Gene3D G3DSA:3.30.2010.10 57 151 4.6E-16 T 28-03-2018 AL549_RS17620 62df2c2fc10a6630d4cd538e809206af 484 Gene3D G3DSA:1.25.40.10 236 364 5.6E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS00350 8b1e48e99c0649feaf15f5ecdcd94249 393 Gene3D G3DSA:1.20.1250.20 8 191 6.6E-10 T 28-03-2018 AL549_RS00350 8b1e48e99c0649feaf15f5ecdcd94249 393 Gene3D G3DSA:1.20.1250.20 192 388 1.7E-15 T 28-03-2018 AL549_RS00350 8b1e48e99c0649feaf15f5ecdcd94249 393 SUPERFAMILY SSF103473 1 378 5.89E-37 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS00350 8b1e48e99c0649feaf15f5ecdcd94249 393 Pfam PF07690 Major Facilitator Superfamily 16 345 9.4E-13 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS17975 552121ace3773be2f5b58679acbd5e32 247 Pfam PF11101 Protein of unknown function (DUF2884) 21 245 4.7E-72 T 28-03-2018 IPR021307 Protein of unknown function DUF2884 AL549_RS17975 552121ace3773be2f5b58679acbd5e32 247 Gene3D G3DSA:1.20.5.1230 41 226 3.4E-6 T 28-03-2018 AL549_RS15575 d9948a48c6899dfaf63ddc3265d665b0 343 SUPERFAMILY SSF55874 230 316 3.92E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS15575 d9948a48c6899dfaf63ddc3265d665b0 343 Pfam PF06580 Histidine kinase 157 236 4.7E-18 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AL549_RS15575 d9948a48c6899dfaf63ddc3265d665b0 343 Gene3D G3DSA:3.30.565.10 218 343 3.1E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS09145 71ee03f0f4bf779a4bb982b57aedc63d 275 Gene3D G3DSA:3.40.50.150 75 274 1.0E-46 T 28-03-2018 AL549_RS09145 71ee03f0f4bf779a4bb982b57aedc63d 275 SUPERFAMILY SSF53335 76 269 6.0E-50 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS09145 71ee03f0f4bf779a4bb982b57aedc63d 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 1.8E-68 T 28-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AL549_RS09145 71ee03f0f4bf779a4bb982b57aedc63d 275 SUPERFAMILY SSF47757 3 75 1.27E-14 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL549_RS09145 71ee03f0f4bf779a4bb982b57aedc63d 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 6.2E-10 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL549_RS09145 71ee03f0f4bf779a4bb982b57aedc63d 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 3.9E-43 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS09145 71ee03f0f4bf779a4bb982b57aedc63d 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 3.9E-43 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS09145 71ee03f0f4bf779a4bb982b57aedc63d 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 3.9E-43 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS09145 71ee03f0f4bf779a4bb982b57aedc63d 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 3.9E-43 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS09145 71ee03f0f4bf779a4bb982b57aedc63d 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 3.9E-43 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS09145 71ee03f0f4bf779a4bb982b57aedc63d 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 3.9E-43 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS09145 71ee03f0f4bf779a4bb982b57aedc63d 275 SMART SM00138 8 272 3.0E-133 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS09145 71ee03f0f4bf779a4bb982b57aedc63d 275 Gene3D G3DSA:1.10.155.10 1 74 4.2E-12 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL549_RS08465 7db9a315e2d5f63be1136a9408005e28 426 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 3.4E-114 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS08465 7db9a315e2d5f63be1136a9408005e28 426 SUPERFAMILY SSF118215 5 406 1.15E-103 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS08465 7db9a315e2d5f63be1136a9408005e28 426 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 8.3E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS08465 7db9a315e2d5f63be1136a9408005e28 426 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 8.3E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS08465 7db9a315e2d5f63be1136a9408005e28 426 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 8.3E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS08465 7db9a315e2d5f63be1136a9408005e28 426 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 8.3E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS08465 7db9a315e2d5f63be1136a9408005e28 426 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 8.3E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS08465 7db9a315e2d5f63be1136a9408005e28 426 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 8.3E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS08465 7db9a315e2d5f63be1136a9408005e28 426 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 8.3E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS08465 7db9a315e2d5f63be1136a9408005e28 426 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 8.3E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS08465 7db9a315e2d5f63be1136a9408005e28 426 Gene3D G3DSA:1.10.3860.10 1 412 1.4E-106 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS08825 28ff71caa92138c7dbd70498db5a05b4 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 1.2E-135 T 28-03-2018 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 AL549_RS08825 28ff71caa92138c7dbd70498db5a05b4 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 28-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 AL549_RS08825 28ff71caa92138c7dbd70498db5a05b4 373 Pfam PF01098 Cell cycle protein 23 367 9.3E-114 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 AL549_RS21825 c7d286438abad2d6719cfea0e1aa8e3e 177 SUPERFAMILY SSF47928 4 105 2.62E-28 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21825 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.6E-27 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21825 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 4.6E-27 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21825 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 4.6E-27 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21825 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 4.6E-27 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21825 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.6E-27 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21825 c7d286438abad2d6719cfea0e1aa8e3e 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.713 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21825 c7d286438abad2d6719cfea0e1aa8e3e 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 28-03-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21825 c7d286438abad2d6719cfea0e1aa8e3e 177 Gene3D G3DSA:1.10.520.20 2 106 8.2E-31 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21825 c7d286438abad2d6719cfea0e1aa8e3e 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 2.6E-53 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21825 c7d286438abad2d6719cfea0e1aa8e3e 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 3.3E-63 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS01120 193dc6159f3eb5196b928fcdae0d0e7a 146 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 125 1.2E-30 T 28-03-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 AL549_RS01120 193dc6159f3eb5196b928fcdae0d0e7a 146 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 144 7.9E-32 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AL549_RS01120 193dc6159f3eb5196b928fcdae0d0e7a 146 Gene3D G3DSA:3.40.930.10 1 146 2.1E-29 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS01120 193dc6159f3eb5196b928fcdae0d0e7a 146 SUPERFAMILY SSF55804 1 144 3.53E-30 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS02510 94b1933fd2e691218bf7066dae97e19d 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 9.5E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL549_RS02510 94b1933fd2e691218bf7066dae97e19d 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 9.5E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL549_RS02510 94b1933fd2e691218bf7066dae97e19d 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 9.5E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL549_RS02510 94b1933fd2e691218bf7066dae97e19d 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 9.5E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL549_RS02510 94b1933fd2e691218bf7066dae97e19d 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 9.5E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL549_RS02510 94b1933fd2e691218bf7066dae97e19d 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 9.5E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL549_RS02510 94b1933fd2e691218bf7066dae97e19d 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 9.5E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL549_RS02510 94b1933fd2e691218bf7066dae97e19d 437 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 3.9E-58 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL549_RS02510 94b1933fd2e691218bf7066dae97e19d 437 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 412 1.3E-51 T 28-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AL549_RS02510 94b1933fd2e691218bf7066dae97e19d 437 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 142 172 - T 28-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 AL549_RS02510 94b1933fd2e691218bf7066dae97e19d 437 Gene3D G3DSA:3.90.110.10 161 436 4.6E-89 T 28-03-2018 AL549_RS02510 94b1933fd2e691218bf7066dae97e19d 437 SUPERFAMILY SSF51735 3 170 5.22E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS02510 94b1933fd2e691218bf7066dae97e19d 437 Gene3D G3DSA:3.40.50.720 2 160 1.6E-27 T 28-03-2018 AL549_RS02510 94b1933fd2e691218bf7066dae97e19d 437 SUPERFAMILY SSF56327 173 436 4.75E-85 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL549_RS05805 c8fb47c169e19e8fbcc46f7349806f71 204 SMART SM00271 152 204 8.8E-8 T 28-03-2018 IPR001623 DnaJ domain AL549_RS05805 c8fb47c169e19e8fbcc46f7349806f71 204 Pfam PF00226 DnaJ domain 158 203 1.3E-9 T 28-03-2018 IPR001623 DnaJ domain AL549_RS05805 c8fb47c169e19e8fbcc46f7349806f71 204 Gene3D G3DSA:1.10.287.110 109 204 2.7E-14 T 28-03-2018 IPR001623 DnaJ domain AL549_RS05805 c8fb47c169e19e8fbcc46f7349806f71 204 Pfam PF12339 DNA-J related protein 16 137 6.6E-42 T 28-03-2018 IPR021059 DnaJ-related protein, N-terminal AL549_RS05805 c8fb47c169e19e8fbcc46f7349806f71 204 SUPERFAMILY SSF46565 125 203 1.06E-12 T 28-03-2018 IPR001623 DnaJ domain AL549_RS08135 51d18c4859c2fdbad9b61256dd43a258 315 Pfam PF03466 LysR substrate binding domain 97 296 5.7E-14 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS08135 51d18c4859c2fdbad9b61256dd43a258 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 1.2E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS08135 51d18c4859c2fdbad9b61256dd43a258 315 Gene3D G3DSA:3.40.190.10 96 188 8.0E-13 T 28-03-2018 AL549_RS08135 51d18c4859c2fdbad9b61256dd43a258 315 SUPERFAMILY SSF53850 93 298 4.81E-23 T 28-03-2018 AL549_RS08135 51d18c4859c2fdbad9b61256dd43a258 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 5.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS08135 51d18c4859c2fdbad9b61256dd43a258 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 5.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS08135 51d18c4859c2fdbad9b61256dd43a258 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 5.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS08135 51d18c4859c2fdbad9b61256dd43a258 315 Gene3D G3DSA:3.40.190.10 189 272 1.5E-4 T 28-03-2018 AL549_RS08135 51d18c4859c2fdbad9b61256dd43a258 315 SUPERFAMILY SSF46785 7 89 3.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS08135 51d18c4859c2fdbad9b61256dd43a258 315 Gene3D G3DSA:1.10.10.10 2 93 2.4E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS09875 07fd2e9823ef1d732945acb6e6da62bd 194 SUPERFAMILY SSF144091 4 180 2.09E-30 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AL549_RS09875 07fd2e9823ef1d732945acb6e6da62bd 194 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 32 179 3.5E-50 T 28-03-2018 IPR023826 Rhomboid-like serine protease, proteobacteria AL549_RS09875 07fd2e9823ef1d732945acb6e6da62bd 194 Pfam PF01694 Rhomboid family 42 180 3.7E-14 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AL549_RS09875 07fd2e9823ef1d732945acb6e6da62bd 194 Gene3D G3DSA:1.20.1540.10 2 182 3.4E-22 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AL549_RS01390 883b68ede384289300f45e945b937071 336 Gene3D G3DSA:3.40.50.2300 54 173 4.9E-31 T 28-03-2018 AL549_RS01390 883b68ede384289300f45e945b937071 336 SMART SM00354 1 71 5.9E-27 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS01390 883b68ede384289300f45e945b937071 336 SUPERFAMILY SSF53822 61 331 2.57E-81 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS01390 883b68ede384289300f45e945b937071 336 Gene3D G3DSA:3.40.50.2300 174 302 3.9E-46 T 28-03-2018 AL549_RS01390 883b68ede384289300f45e945b937071 336 SUPERFAMILY SSF47413 2 60 3.12E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS01390 883b68ede384289300f45e945b937071 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.9E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS01390 883b68ede384289300f45e945b937071 336 Pfam PF13377 Periplasmic binding protein-like domain 169 328 3.0E-34 T 28-03-2018 AL549_RS01390 883b68ede384289300f45e945b937071 336 Gene3D G3DSA:1.10.260.40 2 53 8.0E-24 T 28-03-2018 AL549_RS05405 3fa474d0f17b114a86bad577d9441040 514 Gene3D G3DSA:1.10.287.950 224 278 0.0027 T 28-03-2018 AL549_RS05405 3fa474d0f17b114a86bad577d9441040 514 Gene3D G3DSA:1.10.287.950 279 485 1.0E-51 T 28-03-2018 AL549_RS05405 3fa474d0f17b114a86bad577d9441040 514 SUPERFAMILY SSF55785 17 112 1.42E-24 T 28-03-2018 IPR000014 PAS domain AL549_RS05405 3fa474d0f17b114a86bad577d9441040 514 Gene3D G3DSA:3.40.50.10600 2 125 9.9E-25 T 28-03-2018 AL549_RS05405 3fa474d0f17b114a86bad577d9441040 514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 109 7.9E-10 T 28-03-2018 IPR000014 PAS domain AL549_RS05405 3fa474d0f17b114a86bad577d9441040 514 SUPERFAMILY SSF58104 259 513 4.97E-74 T 28-03-2018 AL549_RS05405 3fa474d0f17b114a86bad577d9441040 514 Pfam PF08447 PAS fold 28 112 1.5E-15 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 AL549_RS05405 3fa474d0f17b114a86bad577d9441040 514 SMART SM00283 256 514 2.7E-67 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS05405 3fa474d0f17b114a86bad577d9441040 514 SMART SM00091 5 72 0.0059 T 28-03-2018 IPR000014 PAS domain AL549_RS05405 3fa474d0f17b114a86bad577d9441040 514 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 481 5.9E-41 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS05405 3fa474d0f17b114a86bad577d9441040 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 267 296 2.2E-7 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS05405 3fa474d0f17b114a86bad577d9441040 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 409 2.2E-7 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS23545 e3aad298f1f3d8c38241881c09c62f66 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 28-03-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23545 e3aad298f1f3d8c38241881c09c62f66 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-44 T 28-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23545 e3aad298f1f3d8c38241881c09c62f66 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.8E-40 T 28-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23545 e3aad298f1f3d8c38241881c09c62f66 103 SUPERFAMILY SSF141091 1 102 9.94E-39 T 28-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23545 e3aad298f1f3d8c38241881c09c62f66 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.497 T 28-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS12195 67bbaf44785fae4d11b0e619bb25c708 244 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 230 2.7E-59 T 28-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AL549_RS12195 67bbaf44785fae4d11b0e619bb25c708 244 Gene3D G3DSA:3.40.50.1360 1 244 6.5E-62 T 28-03-2018 AL549_RS12195 67bbaf44785fae4d11b0e619bb25c708 244 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 242 1.3E-50 T 28-03-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 AL549_RS12195 67bbaf44785fae4d11b0e619bb25c708 244 SUPERFAMILY SSF100950 3 243 4.6E-57 T 28-03-2018 AL549_RS17200 716738daabeeb6b38545c1a697c277cd 264 SUPERFAMILY SSF55120 1 255 1.28E-93 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS17200 716738daabeeb6b38545c1a697c277cd 264 Gene3D G3DSA:3.30.70.660 105 242 2.0E-37 T 28-03-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS17200 716738daabeeb6b38545c1a697c277cd 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 5.9E-74 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS17200 716738daabeeb6b38545c1a697c277cd 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 2.6E-29 T 28-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS17200 716738daabeeb6b38545c1a697c277cd 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 9.3E-11 T 28-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS17200 716738daabeeb6b38545c1a697c277cd 264 Gene3D G3DSA:3.30.70.580 1 104 1.7E-35 T 28-03-2018 AL549_RS17200 716738daabeeb6b38545c1a697c277cd 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.683 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS17200 716738daabeeb6b38545c1a697c277cd 264 PIRSF PIRSF001430 1 256 7.8E-77 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS07315 257f676a7f99468039b9b4851f9e8360 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 134 3.7E-23 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AL549_RS06795 b3ec399e619d1c579aa731e61b119d93 417 Pfam PF03222 Tryptophan/tyrosine permease family 30 407 5.3E-15 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AL549_RS01690 1cf92f36044d261023e5845ef9f95016 926 Pfam PF06202 Amylo-alpha-1,6-glucosidase 400 765 6.0E-118 T 28-03-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 AL549_RS01690 1cf92f36044d261023e5845ef9f95016 926 Gene3D G3DSA:1.50.10.10 377 765 6.1E-53 T 28-03-2018 AL549_RS01690 1cf92f36044d261023e5845ef9f95016 926 Gene3D G3DSA:2.60.40.10 5 120 4.7E-7 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS01690 1cf92f36044d261023e5845ef9f95016 926 SUPERFAMILY SSF48208 366 844 1.53E-67 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL549_RS16010 b09d8fb7c0af6aeb3eca7c09c667b17f 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 1.4E-97 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AL549_RS16010 b09d8fb7c0af6aeb3eca7c09c667b17f 507 Gene3D G3DSA:3.20.130.10 315 490 5.4E-68 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL549_RS16010 b09d8fb7c0af6aeb3eca7c09c667b17f 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 1.2E-61 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AL549_RS16010 b09d8fb7c0af6aeb3eca7c09c667b17f 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 488 1.8E-50 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL549_RS16010 b09d8fb7c0af6aeb3eca7c09c667b17f 507 Pfam PF05683 Fumarase C-terminus 289 490 1.9E-83 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL549_RS16010 b09d8fb7c0af6aeb3eca7c09c667b17f 507 PIRSF PIRSF001394 1 507 3.7E-214 T 28-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 AL549_RS16010 b09d8fb7c0af6aeb3eca7c09c667b17f 507 SUPERFAMILY SSF117457 317 489 1.23E-63 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL549_RS20335 1c0636c55914d38e89601a52d017efba 75 Gene3D G3DSA:1.20.5.300 7 52 9.5E-18 T 28-03-2018 AL549_RS20335 1c0636c55914d38e89601a52d017efba 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.621 T 28-03-2018 IPR007236 SlyX AL549_RS20335 1c0636c55914d38e89601a52d017efba 75 Pfam PF04102 SlyX 9 75 9.9E-25 T 28-03-2018 IPR007236 SlyX AL549_RS03020 16f61a319ffd216c3f9e7a6c81c7ac7d 328 SUPERFAMILY SSF46626 25 174 8.27E-47 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS03020 16f61a319ffd216c3f9e7a6c81c7ac7d 328 SUPERFAMILY SSF46626 173 324 1.97E-41 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS03020 16f61a319ffd216c3f9e7a6c81c7ac7d 328 Gene3D G3DSA:1.10.760.10 31 191 2.7E-40 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS03020 16f61a319ffd216c3f9e7a6c81c7ac7d 328 Gene3D G3DSA:1.10.760.10 192 312 5.2E-18 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS03020 16f61a319ffd216c3f9e7a6c81c7ac7d 328 PIRSF PIRSF000294 3 328 6.0E-122 T 28-03-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 AL549_RS03020 16f61a319ffd216c3f9e7a6c81c7ac7d 328 Pfam PF03150 Di-haem cytochrome c peroxidase 39 186 6.7E-48 T 28-03-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 AL549_RS03020 16f61a319ffd216c3f9e7a6c81c7ac7d 328 Pfam PF00034 Cytochrome c 195 304 2.2E-11 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS16885 695902d3ee8e69697f350396248199ae 295 Gene3D G3DSA:3.90.1200.10 67 288 6.5E-22 T 28-03-2018 AL549_RS16885 695902d3ee8e69697f350396248199ae 295 SUPERFAMILY SSF56112 30 273 5.1E-34 T 28-03-2018 IPR011009 Protein kinase-like domain AL549_RS16885 695902d3ee8e69697f350396248199ae 295 Pfam PF01636 Phosphotransferase enzyme family 34 220 5.5E-11 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase AL549_RS16885 695902d3ee8e69697f350396248199ae 295 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 34 287 2.5E-106 T 28-03-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 AL549_RS21925 e13fc744d79eb0f72a314705d71333d5 473 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 471 1.1E-172 T 28-03-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 AL549_RS21925 e13fc744d79eb0f72a314705d71333d5 473 Gene3D G3DSA:3.30.70.20 224 280 1.2E-10 T 28-03-2018 AL549_RS21925 e13fc744d79eb0f72a314705d71333d5 473 Gene3D G3DSA:2.60.40.10 365 473 2.0E-28 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS21925 e13fc744d79eb0f72a314705d71333d5 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS21925 e13fc744d79eb0f72a314705d71333d5 473 Pfam PF12801 4Fe-4S binding domain 97 136 9.6E-9 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS21925 e13fc744d79eb0f72a314705d71333d5 473 Pfam PF13746 4Fe-4S dicluster domain 222 326 1.2E-41 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS21925 e13fc744d79eb0f72a314705d71333d5 473 Gene3D G3DSA:3.30.70.20 306 364 0.0016 T 28-03-2018 AL549_RS21925 e13fc744d79eb0f72a314705d71333d5 473 Gene3D G3DSA:3.30.70.20 281 305 2.0E-4 T 28-03-2018 AL549_RS21925 e13fc744d79eb0f72a314705d71333d5 473 SUPERFAMILY SSF54862 107 129 1.0E-32 T 28-03-2018 AL549_RS21925 e13fc744d79eb0f72a314705d71333d5 473 SUPERFAMILY SSF54862 175 352 1.0E-32 T 28-03-2018 AL549_RS21925 e13fc744d79eb0f72a314705d71333d5 473 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 470 1.5E-29 T 28-03-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain AL549_RS07495 d4f837775b51de5446c9435377250ee1 287 PIRSF PIRSF005917 1 287 2.2E-108 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL549_RS07495 d4f837775b51de5446c9435377250ee1 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.608 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL549_RS07495 d4f837775b51de5446c9435377250ee1 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 2.4E-102 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL549_RS07495 d4f837775b51de5446c9435377250ee1 287 SUPERFAMILY SSF53790 13 232 5.63E-86 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL549_RS07495 d4f837775b51de5446c9435377250ee1 287 Gene3D G3DSA:3.30.950.10 122 237 3.3E-43 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL549_RS07495 d4f837775b51de5446c9435377250ee1 287 Gene3D G3DSA:3.40.1010.10 11 121 7.4E-44 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL549_RS07495 d4f837775b51de5446c9435377250ee1 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 28-03-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL549_RS07495 d4f837775b51de5446c9435377250ee1 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 2.4E-28 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL549_RS18650 ec42135ccdcf162fe3de422b63ec8808 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.7E-25 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL549_RS18650 ec42135ccdcf162fe3de422b63ec8808 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.7E-25 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL549_RS18650 ec42135ccdcf162fe3de422b63ec8808 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.7E-25 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL549_RS18650 ec42135ccdcf162fe3de422b63ec8808 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.7E-25 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL549_RS18650 ec42135ccdcf162fe3de422b63ec8808 395 SUPERFAMILY SSF55174 320 394 4.32E-15 T 28-03-2018 AL549_RS18650 ec42135ccdcf162fe3de422b63ec8808 395 Gene3D G3DSA:1.10.240.10 219 309 6.6E-26 T 28-03-2018 AL549_RS18650 ec42135ccdcf162fe3de422b63ec8808 395 SUPERFAMILY SSF52374 6 316 3.75E-98 T 28-03-2018 AL549_RS18650 ec42135ccdcf162fe3de422b63ec8808 395 Gene3D G3DSA:3.10.290.10 310 395 6.3E-18 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL549_RS18650 ec42135ccdcf162fe3de422b63ec8808 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS18650 ec42135ccdcf162fe3de422b63ec8808 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 394 1.5E-127 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL549_RS18650 ec42135ccdcf162fe3de422b63ec8808 395 Gene3D G3DSA:3.40.50.620 1 218 3.8E-60 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS18650 ec42135ccdcf162fe3de422b63ec8808 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 2.8E-78 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS18650 ec42135ccdcf162fe3de422b63ec8808 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.459 T 28-03-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 AL549_RS15350 6fe0443724d6fefe75f0bc3363af286a 327 SUPERFAMILY SSF56935 153 322 1.83E-5 T 28-03-2018 AL549_RS15350 6fe0443724d6fefe75f0bc3363af286a 327 Pfam PF11383 Protein of unknown function (DUF3187) 16 322 2.0E-116 T 28-03-2018 IPR021523 Protein of unknown function DUF3187 AL549_RS15350 6fe0443724d6fefe75f0bc3363af286a 327 Gene3D G3DSA:2.40.160.10 63 133 0.0069 T 28-03-2018 AL549_RS15350 6fe0443724d6fefe75f0bc3363af286a 327 Gene3D G3DSA:2.40.160.20 134 322 8.3E-6 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS23070 941614f5a0dec86d7314a077daf3d729 99 SUPERFAMILY SSF82771 3 89 1.19E-19 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AL549_RS23070 941614f5a0dec86d7314a077daf3d729 99 Gene3D G3DSA:3.40.1440.10 3 98 1.3E-17 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AL549_RS23070 941614f5a0dec86d7314a077daf3d729 99 Pfam PF01541 GIY-YIG catalytic domain 5 77 4.2E-13 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AL549_RS03885 a9f51f7c676e4b203eed0f6a036b3542 491 SUPERFAMILY SSF46785 24 88 1.79E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03885 a9f51f7c676e4b203eed0f6a036b3542 491 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 87 4.2E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS03885 a9f51f7c676e4b203eed0f6a036b3542 491 Gene3D G3DSA:1.10.10.10 18 89 1.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03885 a9f51f7c676e4b203eed0f6a036b3542 491 Gene3D G3DSA:3.40.640.10 162 372 3.3E-37 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS03885 a9f51f7c676e4b203eed0f6a036b3542 491 SMART SM00345 28 87 9.7E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS03885 a9f51f7c676e4b203eed0f6a036b3542 491 SUPERFAMILY SSF53383 125 484 1.55E-73 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS03885 a9f51f7c676e4b203eed0f6a036b3542 491 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 9.3E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS03885 a9f51f7c676e4b203eed0f6a036b3542 491 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 9.3E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS03885 a9f51f7c676e4b203eed0f6a036b3542 491 Pfam PF00155 Aminotransferase class I and II 134 450 1.0E-24 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL549_RS03885 a9f51f7c676e4b203eed0f6a036b3542 491 Gene3D G3DSA:3.90.1150.10 373 487 1.5E-18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS05280 281eca21d2498fc439711c0227594b7e 297 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 47 61 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL549_RS05280 281eca21d2498fc439711c0227594b7e 297 Gene3D G3DSA:3.40.1010.10 42 166 1.7E-33 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL549_RS05280 281eca21d2498fc439711c0227594b7e 297 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 44 252 8.7E-46 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL549_RS05280 281eca21d2498fc439711c0227594b7e 297 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 42 276 1.6E-87 T 28-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL549_RS05280 281eca21d2498fc439711c0227594b7e 297 SUPERFAMILY SSF53790 40 280 1.44E-69 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL549_RS05280 281eca21d2498fc439711c0227594b7e 297 Gene3D G3DSA:3.30.950.10 167 291 1.9E-27 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL549_RS18060 926f16adcc43e6f4824c48c410e1dfa1 222 Gene3D G3DSA:2.60.120.10 37 215 2.0E-14 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS18060 926f16adcc43e6f4824c48c410e1dfa1 222 Pfam PF12973 ChrR Cupin-like domain 126 196 2.2E-14 T 28-03-2018 IPR025979 ChrR-like cupin domain AL549_RS18060 926f16adcc43e6f4824c48c410e1dfa1 222 SUPERFAMILY SSF51182 112 206 1.3E-14 T 28-03-2018 IPR011051 RmlC-like cupin domain AL549_RS18060 926f16adcc43e6f4824c48c410e1dfa1 222 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 4 219 4.4E-89 T 28-03-2018 IPR012807 Anti-sigma factor ChrR, putative AL549_RS18060 926f16adcc43e6f4824c48c410e1dfa1 222 Pfam PF13490 Putative zinc-finger 9 37 3.0E-6 T 28-03-2018 IPR027383 Putative zinc-finger AL549_RS22430 6253b93dfcfc7be6867cb2fa2008d0be 173 SUPERFAMILY SSF52540 4 170 1.28E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS22430 6253b93dfcfc7be6867cb2fa2008d0be 173 Pfam PF13521 AAA domain 4 164 1.7E-40 T 28-03-2018 AL549_RS22430 6253b93dfcfc7be6867cb2fa2008d0be 173 Gene3D G3DSA:3.40.50.300 3 169 3.4E-11 T 28-03-2018 AL549_RS17390 74d7f0e26472f701a91e2d0424972d0e 122 SMART SM00448 1 115 6.5E-35 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS17390 74d7f0e26472f701a91e2d0424972d0e 122 Gene3D G3DSA:3.40.50.2300 1 122 1.9E-37 T 28-03-2018 AL549_RS17390 74d7f0e26472f701a91e2d0424972d0e 122 SUPERFAMILY SSF52172 1 120 3.56E-37 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS17390 74d7f0e26472f701a91e2d0424972d0e 122 Pfam PF00072 Response regulator receiver domain 3 115 1.6E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS01935 9ea1ec1337152845d165d090f8903ce2 281 SUPERFAMILY SSF52540 15 263 1.74E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS01935 9ea1ec1337152845d165d090f8903ce2 281 Pfam PF00005 ABC transporter 36 191 5.5E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS01935 9ea1ec1337152845d165d090f8903ce2 281 Gene3D G3DSA:3.40.50.300 12 279 1.0E-71 T 28-03-2018 AL549_RS01935 9ea1ec1337152845d165d090f8903ce2 281 SMART SM00382 44 241 2.4E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS01935 9ea1ec1337152845d165d090f8903ce2 281 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS04975 7f5debf44f1b9009e9d1bfa04a8c6c3c 297 Pfam PF01545 Cation efflux family 14 214 1.8E-32 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL549_RS04975 7f5debf44f1b9009e9d1bfa04a8c6c3c 297 Gene3D G3DSA:1.20.1510.10 8 214 1.5E-24 T 28-03-2018 AL549_RS04975 7f5debf44f1b9009e9d1bfa04a8c6c3c 297 SUPERFAMILY SSF161111 7 214 2.48E-33 T 28-03-2018 AL549_RS04975 7f5debf44f1b9009e9d1bfa04a8c6c3c 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 281 1.1E-26 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL549_RS00400 4ff1c096d3174cdcd9aa16be3cf285cb 204 PRINTS PR01021 OMPA domain signature 124 140 2.4E-8 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS00400 4ff1c096d3174cdcd9aa16be3cf285cb 204 PRINTS PR01021 OMPA domain signature 79 101 2.4E-8 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS00400 4ff1c096d3174cdcd9aa16be3cf285cb 204 PRINTS PR01021 OMPA domain signature 109 124 2.4E-8 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS00400 4ff1c096d3174cdcd9aa16be3cf285cb 204 Pfam PF00691 OmpA family 78 169 2.0E-14 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS00400 4ff1c096d3174cdcd9aa16be3cf285cb 204 Gene3D G3DSA:3.30.1330.60 19 204 1.6E-18 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS00400 4ff1c096d3174cdcd9aa16be3cf285cb 204 SUPERFAMILY SSF103088 49 152 1.15E-15 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS06615 65ad46f2b7173b6ea55225b355c16407 1249 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 113 400 2.7E-80 T 28-03-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 AL549_RS06615 65ad46f2b7173b6ea55225b355c16407 1249 Gene3D G3DSA:2.60.500.10 938 1017 1.9E-11 T 28-03-2018 AL549_RS06615 65ad46f2b7173b6ea55225b355c16407 1249 Gene3D G3DSA:2.60.500.10 842 937 8.7E-8 T 28-03-2018 AL549_RS06615 65ad46f2b7173b6ea55225b355c16407 1249 Gene3D G3DSA:2.60.500.10 1131 1210 0.5 T 28-03-2018 AL549_RS06615 65ad46f2b7173b6ea55225b355c16407 1249 Gene3D G3DSA:2.60.500.10 659 743 2.0E-9 T 28-03-2018 AL549_RS06615 65ad46f2b7173b6ea55225b355c16407 1249 Gene3D G3DSA:2.60.40.10 1018 1114 2.8E-5 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS06615 65ad46f2b7173b6ea55225b355c16407 1249 SUPERFAMILY SSF55486 240 323 2.1E-6 T 28-03-2018 AL549_RS06615 65ad46f2b7173b6ea55225b355c16407 1249 Gene3D G3DSA:2.60.40.10 744 840 4.0E-11 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS06615 65ad46f2b7173b6ea55225b355c16407 1249 Pfam PF05547 Immune inhibitor A peptidase M6 133 341 1.5E-13 T 28-03-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 AL549_RS06615 65ad46f2b7173b6ea55225b355c16407 1249 PIRSF PIRSF036597 1 939 0.0 T 28-03-2018 IPR012045 Peptidase M6, unassigned InhA-related AL549_RS06615 65ad46f2b7173b6ea55225b355c16407 1249 PIRSF PIRSF036597 935 1248 2.8E-135 T 28-03-2018 IPR012045 Peptidase M6, unassigned InhA-related AL549_RS00690 4303b119ce70744e7997056dbefa3c6b 255 Gene3D G3DSA:3.40.190.10 109 184 6.7E-4 T 28-03-2018 AL549_RS00690 4303b119ce70744e7997056dbefa3c6b 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 180 2.1E-10 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS00690 4303b119ce70744e7997056dbefa3c6b 255 Gene3D G3DSA:3.40.190.10 3 108 2.1E-6 T 28-03-2018 AL549_RS00690 4303b119ce70744e7997056dbefa3c6b 255 SUPERFAMILY SSF53850 11 199 4.25E-24 T 28-03-2018 AL549_RS20345 5af3001a5373deb738f4df1ef0ade305 199 Gene3D G3DSA:3.10.50.40 1 170 5.8E-33 T 28-03-2018 AL549_RS20345 5af3001a5373deb738f4df1ef0ade305 199 SUPERFAMILY SSF54534 2 140 3.14E-37 T 28-03-2018 AL549_RS20345 5af3001a5373deb738f4df1ef0ade305 199 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 1.5E-13 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL549_RS10170 ac580598a64dd6c720854cbbb35681cf 333 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 47.895 T 28-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AL549_RS10170 ac580598a64dd6c720854cbbb35681cf 333 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 1.0E-98 T 28-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AL549_RS06560 e3ac2d5528d1a4224ffb41515cc7047c 376 Pfam PF13432 Tetratricopeptide repeat 90 149 2.1E-5 T 28-03-2018 AL549_RS06560 e3ac2d5528d1a4224ffb41515cc7047c 376 Gene3D G3DSA:1.25.40.10 38 101 1.3E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS06560 e3ac2d5528d1a4224ffb41515cc7047c 376 Gene3D G3DSA:1.25.40.10 143 356 1.4E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS06560 e3ac2d5528d1a4224ffb41515cc7047c 376 SUPERFAMILY SSF48452 57 212 4.27E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS06560 e3ac2d5528d1a4224ffb41515cc7047c 376 Gene3D G3DSA:1.25.40.10 102 142 2.2E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS17220 e20f78db70c78b95fd7b6b2aa9fead89 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site AL549_RS17220 e20f78db70c78b95fd7b6b2aa9fead89 403 Gene3D G3DSA:3.40.47.10 4 257 1.2E-63 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS17220 e20f78db70c78b95fd7b6b2aa9fead89 403 Gene3D G3DSA:3.40.47.10 258 401 8.5E-41 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS17220 e20f78db70c78b95fd7b6b2aa9fead89 403 SMART SM00825 Beta-ketoacyl synthase 4 403 2.3E-14 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL549_RS17220 e20f78db70c78b95fd7b6b2aa9fead89 403 SUPERFAMILY SSF53901 213 401 3.0E-62 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS17220 e20f78db70c78b95fd7b6b2aa9fead89 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 3.4E-28 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL549_RS17220 e20f78db70c78b95fd7b6b2aa9fead89 403 SUPERFAMILY SSF53901 1 251 2.47E-66 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS17220 e20f78db70c78b95fd7b6b2aa9fead89 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 1.5E-46 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL549_RS11425 7db5280b1260392718f387139a80ecfa 530 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 363 521 1.6E-39 T 28-03-2018 IPR000160 GGDEF domain AL549_RS11425 7db5280b1260392718f387139a80ecfa 530 SUPERFAMILY SSF55073 371 522 1.41E-44 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS11425 7db5280b1260392718f387139a80ecfa 530 Gene3D G3DSA:3.30.70.270 353 526 2.9E-54 T 28-03-2018 AL549_RS11425 7db5280b1260392718f387139a80ecfa 530 SMART SM00267 353 523 7.8E-54 T 28-03-2018 IPR000160 GGDEF domain AL549_RS11425 7db5280b1260392718f387139a80ecfa 530 Pfam PF00990 Diguanylate cyclase, GGDEF domain 365 518 3.8E-44 T 28-03-2018 IPR000160 GGDEF domain AL549_RS11425 7db5280b1260392718f387139a80ecfa 530 Gene3D G3DSA:3.30.450.20 141 265 1.0E-13 T 28-03-2018 AL549_RS01425 8f23f96e9a75039a35980fd49e48fa74 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 88 223 1.2E-8 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS01425 8f23f96e9a75039a35980fd49e48fa74 259 SUPERFAMILY SSF53850 88 225 6.41E-15 T 28-03-2018 AL549_RS01425 8f23f96e9a75039a35980fd49e48fa74 259 Gene3D G3DSA:3.40.190.10 55 237 5.9E-8 T 28-03-2018 AL549_RS07270 6754f8c8b9faf85330b2cb1752c9e3da 141 SUPERFAMILY SSF52402 3 138 2.34E-24 T 28-03-2018 AL549_RS07270 6754f8c8b9faf85330b2cb1752c9e3da 141 PIRSF PIRSF006276 1 141 4.5E-42 T 28-03-2018 IPR006015 Universal stress protein A AL549_RS07270 6754f8c8b9faf85330b2cb1752c9e3da 141 Gene3D G3DSA:3.40.50.620 2 139 1.3E-15 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS07270 6754f8c8b9faf85330b2cb1752c9e3da 141 Pfam PF00582 Universal stress protein family 3 138 2.8E-13 T 28-03-2018 IPR006016 UspA GO:0006950 AL549_RS15650 38a1fd041508a476635c4d478c870349 246 Gene3D G3DSA:1.25.40.10 156 244 1.4E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS15650 38a1fd041508a476635c4d478c870349 246 Pfam PF13432 Tetratricopeptide repeat 34 74 0.006 T 28-03-2018 AL549_RS15650 38a1fd041508a476635c4d478c870349 246 SUPERFAMILY SSF48452 27 193 3.41E-19 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS15650 38a1fd041508a476635c4d478c870349 246 SMART SM00028 28 61 0.42 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS15650 38a1fd041508a476635c4d478c870349 246 SMART SM00028 131 164 11.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS15650 38a1fd041508a476635c4d478c870349 246 SMART SM00028 97 130 3.4 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS15650 38a1fd041508a476635c4d478c870349 246 Gene3D G3DSA:1.25.40.10 20 109 8.3E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS15650 38a1fd041508a476635c4d478c870349 246 Gene3D G3DSA:1.25.40.10 110 155 2.4E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS15650 38a1fd041508a476635c4d478c870349 246 Pfam PF13181 Tetratricopeptide repeat 97 130 0.15 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS03080 1b1b9d54e4b8fbd7ba1b22f1c0afb7dc 235 SMART SM00862 152 227 5.0E-17 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS03080 1b1b9d54e4b8fbd7ba1b22f1c0afb7dc 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 227 1.4E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS03080 1b1b9d54e4b8fbd7ba1b22f1c0afb7dc 235 SMART SM00448 4 114 1.8E-46 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS03080 1b1b9d54e4b8fbd7ba1b22f1c0afb7dc 235 Pfam PF00072 Response regulator receiver domain 6 115 8.4E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS03080 1b1b9d54e4b8fbd7ba1b22f1c0afb7dc 235 Gene3D G3DSA:3.40.50.2300 3 126 9.7E-43 T 28-03-2018 AL549_RS03080 1b1b9d54e4b8fbd7ba1b22f1c0afb7dc 235 SUPERFAMILY SSF46894 132 228 5.1E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS03080 1b1b9d54e4b8fbd7ba1b22f1c0afb7dc 235 Gene3D G3DSA:1.10.10.10 127 232 1.2E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03080 1b1b9d54e4b8fbd7ba1b22f1c0afb7dc 235 SUPERFAMILY SSF52172 2 131 2.99E-44 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS06545 f5d55b7e5e3617961689f6213015853e 442 SMART SM00327 166 434 2.8E-5 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS06545 f5d55b7e5e3617961689f6213015853e 442 Gene3D G3DSA:3.40.50.410 164 433 6.9E-19 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS06545 f5d55b7e5e3617961689f6213015853e 442 SUPERFAMILY SSF53300 164 332 2.5E-18 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS11745 78ff57040625056d648b855a50f3a4c7 402 Gene3D G3DSA:1.20.1250.20 203 396 9.5E-13 T 28-03-2018 AL549_RS11745 78ff57040625056d648b855a50f3a4c7 402 Pfam PF07690 Major Facilitator Superfamily 16 352 5.4E-36 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS11745 78ff57040625056d648b855a50f3a4c7 402 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL549_RS11745 78ff57040625056d648b855a50f3a4c7 402 Gene3D G3DSA:1.20.1250.20 5 199 5.3E-27 T 28-03-2018 AL549_RS11745 78ff57040625056d648b855a50f3a4c7 402 SUPERFAMILY SSF103473 6 389 1.31E-53 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS05055 6991bc66d4de880f7a2ec2d98871b9ae 440 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 440 3.3E-141 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AL549_RS05055 6991bc66d4de880f7a2ec2d98871b9ae 440 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 438 3.5E-133 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AL549_RS07755 df454c95292f3d4c0abbf54d101a702e 476 PRINTS PR00175 Sodium/alanine symporter signature 206 225 3.5E-57 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS07755 df454c95292f3d4c0abbf54d101a702e 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 3.5E-57 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS07755 df454c95292f3d4c0abbf54d101a702e 476 PRINTS PR00175 Sodium/alanine symporter signature 410 430 3.5E-57 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS07755 df454c95292f3d4c0abbf54d101a702e 476 PRINTS PR00175 Sodium/alanine symporter signature 349 371 3.5E-57 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS07755 df454c95292f3d4c0abbf54d101a702e 476 PRINTS PR00175 Sodium/alanine symporter signature 87 109 3.5E-57 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS07755 df454c95292f3d4c0abbf54d101a702e 476 PRINTS PR00175 Sodium/alanine symporter signature 178 196 3.5E-57 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS07755 df454c95292f3d4c0abbf54d101a702e 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 6.8E-162 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS07755 df454c95292f3d4c0abbf54d101a702e 476 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS07755 df454c95292f3d4c0abbf54d101a702e 476 Pfam PF01235 Sodium:alanine symporter family 48 452 1.2E-161 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS23055 dcd339a56a4f21fc6a4e6b362b99b01a 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 4.2E-28 T 28-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL549_RS23055 dcd339a56a4f21fc6a4e6b362b99b01a 388 Gene3D G3DSA:1.10.1040.10 212 287 1.4E-28 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL549_RS23055 dcd339a56a4f21fc6a4e6b362b99b01a 388 Gene3D G3DSA:3.40.50.720 1 193 7.3E-43 T 28-03-2018 AL549_RS23055 dcd339a56a4f21fc6a4e6b362b99b01a 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 170 9.2E-30 T 28-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL549_RS23055 dcd339a56a4f21fc6a4e6b362b99b01a 388 PIRSF PIRSF000124 1 388 1.8E-132 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AL549_RS23055 dcd339a56a4f21fc6a4e6b362b99b01a 388 SUPERFAMILY SSF48179 191 287 1.47E-31 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL549_RS23055 dcd339a56a4f21fc6a4e6b362b99b01a 388 Gene3D G3DSA:1.20.5.100 194 211 2.6E-14 T 28-03-2018 AL549_RS23055 dcd339a56a4f21fc6a4e6b362b99b01a 388 PIRSF PIRSF500134 1 343 1.8E-113 T 28-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AL549_RS23055 dcd339a56a4f21fc6a4e6b362b99b01a 388 PIRSF PIRSF500134 338 388 0.014 T 28-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AL549_RS23055 dcd339a56a4f21fc6a4e6b362b99b01a 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 1.5E-7 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL549_RS23055 dcd339a56a4f21fc6a4e6b362b99b01a 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 1.7E-109 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AL549_RS23055 dcd339a56a4f21fc6a4e6b362b99b01a 388 SMART SM00984 300 387 2.3E-16 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL549_RS23055 dcd339a56a4f21fc6a4e6b362b99b01a 388 SUPERFAMILY SSF52413 283 387 2.09E-27 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL549_RS23055 dcd339a56a4f21fc6a4e6b362b99b01a 388 SUPERFAMILY SSF51735 1 194 9.53E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS23055 dcd339a56a4f21fc6a4e6b362b99b01a 388 Gene3D G3DSA:3.40.50.720 288 388 1.1E-16 T 28-03-2018 AL549_RS09515 27085369eeea873b39ea238be46dfa70 261 SUPERFAMILY SSF52540 3 216 1.22E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS09515 27085369eeea873b39ea238be46dfa70 261 Pfam PF00005 ABC transporter 20 148 1.8E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS09515 27085369eeea873b39ea238be46dfa70 261 Gene3D G3DSA:3.40.50.300 1 244 3.1E-55 T 28-03-2018 AL549_RS09515 27085369eeea873b39ea238be46dfa70 261 SMART SM00382 29 198 1.9E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS18105 5a682558fb84685f62f19e98fbdc7f75 367 SMART SM00925 119 252 1.9E-62 T 28-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AL549_RS18105 5a682558fb84685f62f19e98fbdc7f75 367 Gene3D G3DSA:2.40.240.50 50 253 7.2E-56 T 28-03-2018 AL549_RS18105 5a682558fb84685f62f19e98fbdc7f75 367 SUPERFAMILY SSF50685 20 350 5.93E-100 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AL549_RS18105 5a682558fb84685f62f19e98fbdc7f75 367 Pfam PF03562 MltA specific insert domain 108 252 7.8E-36 T 28-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AL549_RS18105 5a682558fb84685f62f19e98fbdc7f75 367 Pfam PF06725 3D domain 272 348 1.9E-20 T 28-03-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 AL549_RS17145 b61b362fa69ad96a4e6712b08777b6f0 730 SUPERFAMILY SSF52540 34 222 2.39E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS17145 b61b362fa69ad96a4e6712b08777b6f0 730 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 515 587 1.5E-20 T 28-03-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS17145 b61b362fa69ad96a4e6712b08777b6f0 730 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 5.9E-132 T 28-03-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AL549_RS17145 b61b362fa69ad96a4e6712b08777b6f0 730 Gene3D G3DSA:3.40.50.300 1 166 5.3E-38 T 28-03-2018 AL549_RS17145 b61b362fa69ad96a4e6712b08777b6f0 730 Pfam PF13177 DNA polymerase III, delta subunit 20 178 3.2E-44 T 28-03-2018 AL549_RS17145 b61b362fa69ad96a4e6712b08777b6f0 730 Gene3D G3DSA:1.10.8.60 167 242 3.7E-19 T 28-03-2018 AL549_RS17145 b61b362fa69ad96a4e6712b08777b6f0 730 SUPERFAMILY SSF48019 243 362 7.23E-32 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL549_RS17145 b61b362fa69ad96a4e6712b08777b6f0 730 Gene3D G3DSA:1.20.272.10 243 362 1.1E-17 T 28-03-2018 AL549_RS17145 b61b362fa69ad96a4e6712b08777b6f0 730 SMART SM00382 37 179 1.9E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS17145 b61b362fa69ad96a4e6712b08777b6f0 730 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 234 360 1.8E-30 T 28-03-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AL549_RS17145 b61b362fa69ad96a4e6712b08777b6f0 730 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 589 727 3.4E-50 T 28-03-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS10885 5ff713ccd1428b9de68cae6d8170f190 289 Gene3D G3DSA:2.40.170.20 7 289 5.1E-4 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL549_RS10720 43621eecd528fb806cc89fdcfb97de2a 78 Gene3D G3DSA:1.10.1200.10 2 78 5.0E-28 T 28-03-2018 AL549_RS10720 43621eecd528fb806cc89fdcfb97de2a 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.0E-16 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL549_RS10720 43621eecd528fb806cc89fdcfb97de2a 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 4.7E-36 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AL549_RS10720 43621eecd528fb806cc89fdcfb97de2a 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.776 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AL549_RS10720 43621eecd528fb806cc89fdcfb97de2a 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AL549_RS10720 43621eecd528fb806cc89fdcfb97de2a 78 SUPERFAMILY SSF47336 2 76 1.27E-23 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL549_RS17875 875b8dc74291a6dc043f4e478085b5d4 99 Pfam PF11743 Protein of unknown function (DUF3301) 6 96 1.7E-27 T 28-03-2018 IPR021732 Protein of unknown function DUF3301 AL549_RS17875 875b8dc74291a6dc043f4e478085b5d4 99 Gene3D G3DSA:1.20.5.900 1 38 0.0012 T 28-03-2018 AL549_RS21460 0b1481bf94f36f7e664625ac7aa20ef6 335 Gene3D G3DSA:1.10.10.10 2 23 0.0014 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21460 0b1481bf94f36f7e664625ac7aa20ef6 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 28-03-2018 AL549_RS21460 0b1481bf94f36f7e664625ac7aa20ef6 335 Gene3D G3DSA:3.40.50.2300 66 175 2.0E-23 T 28-03-2018 AL549_RS21460 0b1481bf94f36f7e664625ac7aa20ef6 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 1.2E-17 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS21460 0b1481bf94f36f7e664625ac7aa20ef6 335 Gene3D G3DSA:1.10.260.40 24 65 4.9E-17 T 28-03-2018 AL549_RS21460 0b1481bf94f36f7e664625ac7aa20ef6 335 SMART SM00354 9 79 7.9E-27 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS21460 0b1481bf94f36f7e664625ac7aa20ef6 335 Pfam PF13377 Periplasmic binding protein-like domain 176 335 3.0E-29 T 28-03-2018 AL549_RS21460 0b1481bf94f36f7e664625ac7aa20ef6 335 SUPERFAMILY SSF47413 9 67 3.58E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS21460 0b1481bf94f36f7e664625ac7aa20ef6 335 Gene3D G3DSA:3.40.50.2300 176 335 7.2E-40 T 28-03-2018 AL549_RS21460 0b1481bf94f36f7e664625ac7aa20ef6 335 SUPERFAMILY SSF53822 67 322 1.09E-55 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS04080 951019b1034e6267c21414620977a145 293 ProSitePatterns PS01125 ROK family signature. 130 157 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AL549_RS04080 951019b1034e6267c21414620977a145 293 Pfam PF00480 ROK family 4 285 2.8E-57 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AL549_RS04080 951019b1034e6267c21414620977a145 293 Gene3D G3DSA:3.30.420.40 111 290 1.3E-43 T 28-03-2018 AL549_RS04080 951019b1034e6267c21414620977a145 293 SUPERFAMILY SSF53067 1 287 1.51E-46 T 28-03-2018 AL549_RS04080 951019b1034e6267c21414620977a145 293 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 1 291 48.446 T 28-03-2018 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138 AL549_RS04080 951019b1034e6267c21414620977a145 293 Gene3D G3DSA:3.30.420.40 1 110 4.2E-17 T 28-03-2018 AL549_RS01880 5bfb6747bdab92a2abd94609632cdfd1 231 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS01880 5bfb6747bdab92a2abd94609632cdfd1 231 Pfam PF00005 ABC transporter 21 169 2.7E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS01880 5bfb6747bdab92a2abd94609632cdfd1 231 SUPERFAMILY SSF52540 1 224 9.76E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS01880 5bfb6747bdab92a2abd94609632cdfd1 231 Gene3D G3DSA:3.40.50.300 1 228 2.6E-61 T 28-03-2018 AL549_RS01880 5bfb6747bdab92a2abd94609632cdfd1 231 SMART SM00382 30 217 6.0E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS12105 023aa41d68c073da424fb29ef9b5cd41 306 SUPERFAMILY SSF75615 115 202 7.06E-23 T 28-03-2018 AL549_RS12105 023aa41d68c073da424fb29ef9b5cd41 306 Gene3D G3DSA:1.10.8.210 152 207 8.4E-13 T 28-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL549_RS12105 023aa41d68c073da424fb29ef9b5cd41 306 Gene3D G3DSA:3.30.160.110 107 147 1.8E-17 T 28-03-2018 AL549_RS12105 023aa41d68c073da424fb29ef9b5cd41 306 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 197 1.1E-61 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL549_RS12105 023aa41d68c073da424fb29ef9b5cd41 306 Gene3D G3DSA:3.40.50.720 1 106 1.6E-17 T 28-03-2018 AL549_RS12105 023aa41d68c073da424fb29ef9b5cd41 306 Gene3D G3DSA:3.40.1010.10 208 306 7.0E-4 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL549_RS12105 023aa41d68c073da424fb29ef9b5cd41 306 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 3.1E-6 T 28-03-2018 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL549_RS12105 023aa41d68c073da424fb29ef9b5cd41 306 SUPERFAMILY SSF51735 1 113 5.91E-27 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS12105 023aa41d68c073da424fb29ef9b5cd41 306 SUPERFAMILY SSF53790 224 288 6.4E-5 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL549_RS12105 023aa41d68c073da424fb29ef9b5cd41 306 Pfam PF10414 Sirohaem synthase dimerisation region 151 205 8.2E-14 T 28-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL549_RS12105 023aa41d68c073da424fb29ef9b5cd41 306 Pfam PF13241 Putative NAD(P)-binding 6 116 5.8E-30 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL549_RS14355 1b95b401065d94f44d48c6dc3a425f27 174 Pfam PF04664 Opioid growth factor receptor (OGFr) conserved region 29 166 1.7E-18 T 28-03-2018 IPR006757 Opioid growth factor receptor (OGFr) conserved domain GO:0004872|GO:0016020 AL549_RS20305 974a032a316fd1fa1a02efd88872b5ea 91 Pfam PF04077 DsrH like protein 8 85 2.6E-19 T 28-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AL549_RS20305 974a032a316fd1fa1a02efd88872b5ea 91 Gene3D G3DSA:3.40.1260.10 1 88 3.6E-15 T 28-03-2018 AL549_RS20305 974a032a316fd1fa1a02efd88872b5ea 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 90 3.6E-23 T 28-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AL549_RS20305 974a032a316fd1fa1a02efd88872b5ea 91 SUPERFAMILY SSF75169 1 90 9.42E-20 T 28-03-2018 IPR027396 DsrEFH-like AL549_RS12755 c0c52ef28949a532221f00a16cdf293c 155 Pfam PF00877 NlpC/P60 family 48 152 2.6E-27 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AL549_RS12755 c0c52ef28949a532221f00a16cdf293c 155 SUPERFAMILY SSF54001 38 153 4.66E-37 T 28-03-2018 AL549_RS12755 c0c52ef28949a532221f00a16cdf293c 155 Gene3D G3DSA:3.90.1720.10 33 155 4.3E-32 T 28-03-2018 AL549_RS08070 517eb1d02ec0d13d064c0ca769f29606 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 8.1E-126 T 28-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AL549_RS08070 517eb1d02ec0d13d064c0ca769f29606 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 39.488 T 28-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AL549_RS02015 e37ee0d016e06813b92c235deaa33776 390 SMART SM00283 95 366 6.3E-5 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS02015 e37ee0d016e06813b92c235deaa33776 390 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 222 251 1.0E-15 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS02015 e37ee0d016e06813b92c235deaa33776 390 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 193 220 1.0E-15 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS02015 e37ee0d016e06813b92c235deaa33776 390 SUPERFAMILY SSF58104 101 345 4.19E-37 T 28-03-2018 AL549_RS02015 e37ee0d016e06813b92c235deaa33776 390 Gene3D G3DSA:1.10.287.950 95 321 9.5E-31 T 28-03-2018 AL549_RS02015 e37ee0d016e06813b92c235deaa33776 390 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 170 314 1.6E-24 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS22595 4a52643004be10e09496d5b2e46b5893 228 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 35.158 T 28-03-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 AL549_RS22595 4a52643004be10e09496d5b2e46b5893 228 Pfam PF00588 SpoU rRNA Methylase family 20 159 2.6E-35 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL549_RS22595 4a52643004be10e09496d5b2e46b5893 228 Gene3D G3DSA:3.40.1280.10 1 190 1.5E-46 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL549_RS22595 4a52643004be10e09496d5b2e46b5893 228 SUPERFAMILY SSF75217 4 177 1.37E-48 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AL549_RS22595 4a52643004be10e09496d5b2e46b5893 228 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 2.0E-23 T 28-03-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 AL549_RS04560 4a5c7e7358d54b3a3b7f7d38485fa848 432 Gene3D G3DSA:3.20.20.80 12 432 6.7E-92 T 28-03-2018 AL549_RS04560 4a5c7e7358d54b3a3b7f7d38485fa848 432 SMART SM00636 23 416 3.9E-106 T 28-03-2018 IPR011583 Chitinase II GO:0008061 AL549_RS04560 4a5c7e7358d54b3a3b7f7d38485fa848 432 SUPERFAMILY SSF51445 388 417 3.37E-79 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS04560 4a5c7e7358d54b3a3b7f7d38485fa848 432 SUPERFAMILY SSF51445 19 313 3.37E-79 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS04560 4a5c7e7358d54b3a3b7f7d38485fa848 432 Pfam PF00704 Glycosyl hydrolases family 18 25 416 2.0E-81 T 28-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AL549_RS04560 4a5c7e7358d54b3a3b7f7d38485fa848 432 ProSitePatterns PS01095 Chitinases family 18 active site. 169 177 - T 28-03-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL549_RS04560 4a5c7e7358d54b3a3b7f7d38485fa848 432 SUPERFAMILY SSF54556 313 387 5.04E-18 T 28-03-2018 IPR029070 Chitinase insertion domain AL549_RS01315 8b6270c92440f6751d3625e3b4f2f4f6 305 Gene3D G3DSA:3.40.50.1820 3 303 5.7E-7 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS01315 8b6270c92440f6751d3625e3b4f2f4f6 305 SUPERFAMILY SSF53474 126 276 1.92E-7 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS01450 34f5943d79e895867e7eb30ad54b7f0d 329 Gene3D G3DSA:1.10.3720.10 77 324 7.2E-40 T 28-03-2018 AL549_RS01450 34f5943d79e895867e7eb30ad54b7f0d 329 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 310 2.5E-8 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS01450 34f5943d79e895867e7eb30ad54b7f0d 329 Gene3D G3DSA:1.20.58.370 15 59 1.6E-6 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain AL549_RS01450 34f5943d79e895867e7eb30ad54b7f0d 329 SUPERFAMILY SSF161098 72 313 5.89E-55 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS22450 948b78350db72dec2c4af9728548af9a 308 Gene3D G3DSA:3.10.129.10 145 299 7.3E-19 T 28-03-2018 AL549_RS22450 948b78350db72dec2c4af9728548af9a 308 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 297 3.2E-44 T 28-03-2018 IPR012660 Thioesterase, putative AL549_RS22450 948b78350db72dec2c4af9728548af9a 308 SUPERFAMILY SSF55729 2 148 5.23E-30 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS22450 948b78350db72dec2c4af9728548af9a 308 SUPERFAMILY SSF54637 154 296 7.07E-40 T 28-03-2018 IPR029069 HotDog domain AL549_RS22450 948b78350db72dec2c4af9728548af9a 308 Gene3D G3DSA:3.40.630.30 1 144 4.8E-23 T 28-03-2018 AL549_RS22450 948b78350db72dec2c4af9728548af9a 308 Pfam PF00583 Acetyltransferase (GNAT) family 34 122 8.7E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS22450 948b78350db72dec2c4af9728548af9a 308 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 2.8E-52 T 28-03-2018 IPR012660 Thioesterase, putative AL549_RS21450 1095f4bdc51bc2234dda5af95a471a42 173 SUPERFAMILY SSF52540 4 165 5.15E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS21450 1095f4bdc51bc2234dda5af95a471a42 173 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 7 165 6.5E-63 T 28-03-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 AL549_RS21450 1095f4bdc51bc2234dda5af95a471a42 173 Gene3D G3DSA:3.40.50.300 4 173 3.9E-29 T 28-03-2018 AL549_RS21450 1095f4bdc51bc2234dda5af95a471a42 173 Pfam PF01202 Shikimate kinase 13 129 6.2E-13 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL549_RS07985 2bd2ec621959bdccc47ff03ff29b2ec1 102 SUPERFAMILY SSF48295 2 95 1.78E-30 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AL549_RS07985 2bd2ec621959bdccc47ff03ff29b2ec1 102 Pfam PF01371 Trp repressor protein 9 94 5.2E-34 T 28-03-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 AL549_RS07985 2bd2ec621959bdccc47ff03ff29b2ec1 102 TIGRFAM TIGR01321 TrpR: trp operon repressor 2 84 4.1E-27 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 AL549_RS07985 2bd2ec621959bdccc47ff03ff29b2ec1 102 PIRSF PIRSF003196 1 100 4.7E-41 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 AL549_RS07985 2bd2ec621959bdccc47ff03ff29b2ec1 102 Gene3D G3DSA:1.10.1270.10 1 99 3.9E-19 T 28-03-2018 AL549_RS07985 2bd2ec621959bdccc47ff03ff29b2ec1 102 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 81 2.0E-39 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 AL549_RS07985 2bd2ec621959bdccc47ff03ff29b2ec1 102 Hamap MF_00475 Trp operon repressor [trpR]. 6 99 23.735 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 1.6E-99 T 28-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 SMART SM00464 10 201 4.9E-76 T 28-03-2018 IPR003111 Lon, substrate-binding domain AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 Gene3D G3DSA:1.10.4060.10 120 210 4.6E-29 T 28-03-2018 AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 SUPERFAMILY SSF88697 10 200 2.49E-48 T 28-03-2018 IPR015947 PUA-like domain AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 3.2E-41 T 28-03-2018 IPR003111 Lon, substrate-binding domain AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 Gene3D G3DSA:2.30.130.40 1 116 9.2E-30 T 28-03-2018 AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 PIRSF PIRSF001174 1 774 0.0 T 28-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 Gene3D G3DSA:3.40.50.300 312 489 3.4E-29 T 28-03-2018 AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 SUPERFAMILY SSF54211 594 769 1.82E-59 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 SMART SM00382 347 491 1.2E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 675 683 - T 28-03-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 SUPERFAMILY SSF52540 312 586 1.27E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 Gene3D G3DSA:3.30.230.10 584 771 2.1E-70 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 Hamap MF_01973 Lon protease [lon]. 11 771 72.185 T 28-03-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 4.2E-17 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 28-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 Gene3D G3DSA:1.10.8.60 490 583 5.6E-33 T 28-03-2018 AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 6.0E-56 T 28-03-2018 AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 6.0E-56 T 28-03-2018 AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 6.0E-56 T 28-03-2018 AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 6.0E-56 T 28-03-2018 AL549_RS09855 d6f79399b224b6a710a0261a4a1ce652 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 6.0E-56 T 28-03-2018 AL549_RS18315 71cd352d957b615305551ca1286ef9c3 495 Gene3D G3DSA:3.30.450.90 140 242 5.9E-37 T 28-03-2018 AL549_RS18315 71cd352d957b615305551ca1286ef9c3 495 SUPERFAMILY SSF52540 126 460 2.71E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18315 71cd352d957b615305551ca1286ef9c3 495 Pfam PF00437 Type II/IV secretion system protein 144 421 7.6E-83 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL549_RS18315 71cd352d957b615305551ca1286ef9c3 495 Gene3D G3DSA:3.40.50.300 243 452 6.0E-22 T 28-03-2018 AL549_RS11960 893dd2221f9f722b4d19bdcb5de3aab6 379 SUPERFAMILY SSF116734 2 187 1.64E-34 T 28-03-2018 AL549_RS11960 893dd2221f9f722b4d19bdcb5de3aab6 379 Gene3D G3DSA:3.90.220.20 1 156 7.6E-26 T 28-03-2018 AL549_RS11960 893dd2221f9f722b4d19bdcb5de3aab6 379 Pfam PF01420 Type I restriction modification DNA specificity domain 2 169 1.3E-17 T 28-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AL549_RS11960 893dd2221f9f722b4d19bdcb5de3aab6 379 SUPERFAMILY SSF116734 243 379 1.19E-15 T 28-03-2018 AL549_RS11960 893dd2221f9f722b4d19bdcb5de3aab6 379 Gene3D G3DSA:1.10.287.1120 157 376 3.0E-14 T 28-03-2018 AL549_RS10985 5c55e61b130a5ea73ad8fae09fded28d 198 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 29 185 1.9E-55 T 28-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AL549_RS10985 5c55e61b130a5ea73ad8fae09fded28d 198 SUPERFAMILY SSF89392 20 197 2.63E-51 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL549_RS10985 5c55e61b130a5ea73ad8fae09fded28d 198 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 5 196 31.24 T 28-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AL549_RS10985 5c55e61b130a5ea73ad8fae09fded28d 198 Gene3D G3DSA:2.50.20.10 16 197 6.3E-37 T 28-03-2018 AL549_RS10985 5c55e61b130a5ea73ad8fae09fded28d 198 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 7 197 2.8E-64 T 28-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AL549_RS06275 2c54b85c713f3ac3110b22bdd4f10788 434 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 316 405 1.0E-16 T 28-03-2018 IPR023885 4Fe4S-binding SPASM domain AL549_RS06275 2c54b85c713f3ac3110b22bdd4f10788 434 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 194 427 2.0E-10 T 28-03-2018 AL549_RS06275 2c54b85c713f3ac3110b22bdd4f10788 434 SUPERFAMILY SSF102114 43 386 5.36E-39 T 28-03-2018 AL549_RS06275 2c54b85c713f3ac3110b22bdd4f10788 434 Gene3D G3DSA:3.20.20.70 23 373 4.2E-33 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS06275 2c54b85c713f3ac3110b22bdd4f10788 434 Pfam PF13353 4Fe-4S single cluster domain 43 160 1.0E-4 T 28-03-2018 AL549_RS06275 2c54b85c713f3ac3110b22bdd4f10788 434 Pfam PF04055 Radical SAM superfamily 43 211 1.5E-14 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS06275 2c54b85c713f3ac3110b22bdd4f10788 434 Pfam PF13186 Iron-sulfur cluster-binding domain 317 377 5.8E-7 T 28-03-2018 IPR023885 4Fe4S-binding SPASM domain AL549_RS06275 2c54b85c713f3ac3110b22bdd4f10788 434 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 34 423 4.2E-154 T 28-03-2018 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 AL549_RS05050 656a8b948518c51e7886a4a039211943 151 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 7 146 8.8E-46 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN AL549_RS05050 656a8b948518c51e7886a4a039211943 151 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 15 144 9.8E-38 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN AL549_RS00270 dc9f4a780d7fcac31b26516f9c95d59c 684 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 26 393 6.1E-30 T 28-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AL549_RS00270 dc9f4a780d7fcac31b26516f9c95d59c 684 SUPERFAMILY SSF50993 30 398 7.59E-32 T 28-03-2018 AL549_RS00270 dc9f4a780d7fcac31b26516f9c95d59c 684 Gene3D G3DSA:3.40.50.1820 19 677 1.3E-56 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS00270 dc9f4a780d7fcac31b26516f9c95d59c 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 442 460 3.5E-29 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL549_RS00270 dc9f4a780d7fcac31b26516f9c95d59c 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 468 492 3.5E-29 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL549_RS00270 dc9f4a780d7fcac31b26516f9c95d59c 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 608 630 3.5E-29 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL549_RS00270 dc9f4a780d7fcac31b26516f9c95d59c 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 496 515 3.5E-29 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL549_RS00270 dc9f4a780d7fcac31b26516f9c95d59c 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 590 605 3.5E-29 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL549_RS00270 dc9f4a780d7fcac31b26516f9c95d59c 684 Pfam PF00326 Prolyl oligopeptidase family 457 677 3.6E-60 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AL549_RS00270 dc9f4a780d7fcac31b26516f9c95d59c 684 SUPERFAMILY SSF53474 414 658 2.32E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS22740 4576903cd7f4107f8bdee5f1cc5fa10a 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 4.6E-27 T 28-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS22740 4576903cd7f4107f8bdee5f1cc5fa10a 78 Pfam PF00830 Ribosomal L28 family 3 62 1.1E-25 T 28-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS22740 4576903cd7f4107f8bdee5f1cc5fa10a 78 Gene3D G3DSA:2.30.170.40 2 75 1.1E-27 T 28-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS22740 4576903cd7f4107f8bdee5f1cc5fa10a 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.065 T 28-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS22740 4576903cd7f4107f8bdee5f1cc5fa10a 78 SUPERFAMILY SSF143800 2 76 1.35E-29 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS16365 4c4b386fb8c14a5dc4924ee0653b51a5 443 Pfam PF07804 HipA-like C-terminal domain 174 416 9.7E-46 T 28-03-2018 IPR012893 HipA-like, C-terminal AL549_RS16365 4c4b386fb8c14a5dc4924ee0653b51a5 443 Pfam PF13657 HipA N-terminal domain 8 117 1.0E-21 T 28-03-2018 IPR017508 HipA, N-terminal subdomain 1 AL549_RS05610 3c9b6247f29eda74d7e66f6964a9ba2b 251 PIRSF PIRSF004846 2 249 2.0E-64 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 AL549_RS05610 3c9b6247f29eda74d7e66f6964a9ba2b 251 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 28 244 2.4E-59 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 AL549_RS05610 3c9b6247f29eda74d7e66f6964a9ba2b 251 Pfam PF13531 Bacterial extracellular solute-binding protein 24 245 1.0E-44 T 28-03-2018 AL549_RS05610 3c9b6247f29eda74d7e66f6964a9ba2b 251 Gene3D G3DSA:3.40.190.10 21 114 1.2E-16 T 28-03-2018 AL549_RS05610 3c9b6247f29eda74d7e66f6964a9ba2b 251 SUPERFAMILY SSF53850 24 246 3.21E-58 T 28-03-2018 AL549_RS05610 3c9b6247f29eda74d7e66f6964a9ba2b 251 Gene3D G3DSA:3.40.190.10 115 211 1.2E-26 T 28-03-2018 AL549_RS19485 b57c79c709155ffae67cdea0b816c89f 541 SUPERFAMILY SSF58104 243 539 8.11E-70 T 28-03-2018 AL549_RS19485 b57c79c709155ffae67cdea0b816c89f 541 Gene3D G3DSA:3.30.450.20 21 187 4.6E-29 T 28-03-2018 AL549_RS19485 b57c79c709155ffae67cdea0b816c89f 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 6.4E-26 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS19485 b57c79c709155ffae67cdea0b816c89f 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 6.4E-26 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS19485 b57c79c709155ffae67cdea0b816c89f 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 204 6.4E-26 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS19485 b57c79c709155ffae67cdea0b816c89f 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 6.4E-26 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS19485 b57c79c709155ffae67cdea0b816c89f 541 Gene3D G3DSA:1.10.287.950 309 541 8.1E-51 T 28-03-2018 AL549_RS19485 b57c79c709155ffae67cdea0b816c89f 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 503 6.0E-42 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS19485 b57c79c709155ffae67cdea0b816c89f 541 Pfam PF17200 Single Cache domain 2 36 185 7.1E-34 T 28-03-2018 IPR033480 Single Cache domain 2 AL549_RS19485 b57c79c709155ffae67cdea0b816c89f 541 Gene3D G3DSA:1.10.287.950 200 308 0.0059 T 28-03-2018 AL549_RS19485 b57c79c709155ffae67cdea0b816c89f 541 SMART SM01049 30 124 2.1E-19 T 28-03-2018 IPR033480 Single Cache domain 2 AL549_RS19485 b57c79c709155ffae67cdea0b816c89f 541 SMART SM00283 277 538 2.4E-70 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS08325 88bc307ee762c7573cca19c450e85f96 443 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 7.5E-30 T 28-03-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AL549_RS08325 88bc307ee762c7573cca19c450e85f96 443 Pfam PF02601 Exonuclease VII, large subunit 126 440 2.2E-100 T 28-03-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AL549_RS08325 88bc307ee762c7573cca19c450e85f96 443 Gene3D G3DSA:3.40.50.1970 118 245 0.0011 T 28-03-2018 AL549_RS08325 88bc307ee762c7573cca19c450e85f96 443 Gene3D G3DSA:2.40.50.140 5 104 1.4E-5 T 28-03-2018 AL549_RS08325 88bc307ee762c7573cca19c450e85f96 443 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 357 2.9E-134 T 28-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AL549_RS08325 88bc307ee762c7573cca19c450e85f96 443 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.609 T 28-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AL549_RS19345 e5d0e6ffe4ab3353e16e692599414f65 664 Gene3D G3DSA:3.40.50.970 364 540 4.4E-43 T 28-03-2018 AL549_RS19345 e5d0e6ffe4ab3353e16e692599414f65 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 3.8E-48 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL549_RS19345 e5d0e6ffe4ab3353e16e692599414f65 664 SUPERFAMILY SSF52518 333 526 8.14E-69 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS19345 e5d0e6ffe4ab3353e16e692599414f65 664 SUPERFAMILY SSF52922 533 664 1.28E-44 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL549_RS19345 e5d0e6ffe4ab3353e16e692599414f65 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 28-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AL549_RS19345 e5d0e6ffe4ab3353e16e692599414f65 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL549_RS19345 e5d0e6ffe4ab3353e16e692599414f65 664 Gene3D G3DSA:3.40.50.920 541 664 6.9E-33 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL549_RS19345 e5d0e6ffe4ab3353e16e692599414f65 664 SUPERFAMILY SSF52518 6 319 3.21E-119 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS19345 e5d0e6ffe4ab3353e16e692599414f65 664 Gene3D G3DSA:3.40.50.970 1 363 2.0E-127 T 28-03-2018 AL549_RS19345 e5d0e6ffe4ab3353e16e692599414f65 664 Pfam PF02780 Transketolase, C-terminal domain 541 655 6.0E-21 T 28-03-2018 IPR033248 Transketolase, C-terminal domain AL549_RS19345 e5d0e6ffe4ab3353e16e692599414f65 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL549_RS19345 e5d0e6ffe4ab3353e16e692599414f65 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 6.9E-166 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL549_RS19345 e5d0e6ffe4ab3353e16e692599414f65 664 SMART SM00861 354 525 1.1E-67 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL549_RS07275 da89c5cce24f237065c7a6e75b06c6f3 92 SUPERFAMILY SSF54534 6 90 3.79E-24 T 28-03-2018 AL549_RS07275 da89c5cce24f237065c7a6e75b06c6f3 92 Gene3D G3DSA:3.10.50.40 1 92 5.5E-27 T 28-03-2018 AL549_RS07275 da89c5cce24f237065c7a6e75b06c6f3 92 Pfam PF13616 PPIC-type PPIASE domain 13 89 4.2E-19 T 28-03-2018 AL549_RS11250 f0c0e546d2e482658f8ed5b124d640ae 579 Pfam PF02065 Melibiase 170 352 2.2E-16 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AL549_RS11250 f0c0e546d2e482658f8ed5b124d640ae 579 SUPERFAMILY SSF51445 193 532 2.15E-76 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS11250 f0c0e546d2e482658f8ed5b124d640ae 579 Gene3D G3DSA:3.20.20.70 185 494 3.6E-49 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS12385 d0af4621caf9cb2db210d87f5db2d08f 207 SUPERFAMILY SSF48657 4 117 2.22E-39 T 28-03-2018 IPR016103 ProQ/FinO domain AL549_RS12385 d0af4621caf9cb2db210d87f5db2d08f 207 SMART SM00945 3 117 3.2E-63 T 28-03-2018 IPR016103 ProQ/FinO domain AL549_RS12385 d0af4621caf9cb2db210d87f5db2d08f 207 Pfam PF04352 ProQ/FINO family 6 113 7.1E-43 T 28-03-2018 IPR016103 ProQ/FinO domain AL549_RS12385 d0af4621caf9cb2db210d87f5db2d08f 207 Hamap MF_00749 RNA chaperone ProQ [proQ]. 1 207 30.433 T 28-03-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 AL549_RS12385 d0af4621caf9cb2db210d87f5db2d08f 207 Pfam PF17516 ProQ C-terminal domain 158 206 2.6E-22 T 28-03-2018 IPR035236 RNA chaperone ProQ, C-terminal AL549_RS12385 d0af4621caf9cb2db210d87f5db2d08f 207 Gene3D G3DSA:1.10.1710.10 1 119 7.5E-40 T 28-03-2018 IPR016103 ProQ/FinO domain AL549_RS18710 a356244d15a28394e382c7a7c5a67061 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 3.3E-17 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS18710 a356244d15a28394e382c7a7c5a67061 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 4.5E-23 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS18710 a356244d15a28394e382c7a7c5a67061 327 SMART SM00382 34 231 1.3E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS18710 a356244d15a28394e382c7a7c5a67061 327 Pfam PF00005 ABC transporter 26 181 1.3E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS18710 a356244d15a28394e382c7a7c5a67061 327 SUPERFAMILY SSF52540 5 252 1.85E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18710 a356244d15a28394e382c7a7c5a67061 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS18710 a356244d15a28394e382c7a7c5a67061 327 Gene3D G3DSA:3.40.50.300 2 326 2.3E-72 T 28-03-2018 AL549_RS02470 01b2a87b52559e7239e0236952419ce9 199 Gene3D G3DSA:3.40.50.850 2 198 1.5E-38 T 28-03-2018 AL549_RS02470 01b2a87b52559e7239e0236952419ce9 199 SUPERFAMILY SSF52499 8 196 1.57E-44 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL549_RS02470 01b2a87b52559e7239e0236952419ce9 199 Pfam PF00857 Isochorismatase family 24 163 1.7E-35 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL549_RS22990 ab2b487f928c99f2e17f2f6c403da822 279 Pfam PF04991 LicD family 32 257 6.4E-36 T 28-03-2018 IPR007074 LicD family AL549_RS14960 299939e8a194df76c5c680a647008722 30 Pfam PF11665 Protein of unknown function (DUF3265) 9 30 6.9E-13 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS16955 17ffa3643de31372e9b7dce616cce2d0 494 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 95 205 3.5E-10 T 28-03-2018 AL549_RS16955 17ffa3643de31372e9b7dce616cce2d0 494 SUPERFAMILY SSF48208 34 455 4.51E-55 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL549_RS16955 17ffa3643de31372e9b7dce616cce2d0 494 Gene3D G3DSA:1.50.10.10 29 464 2.3E-29 T 28-03-2018 AL549_RS17190 bb5ad401a9e9983104e96307967045b7 421 Pfam PF08245 Mur ligase middle domain 54 193 2.6E-7 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL549_RS17190 bb5ad401a9e9983104e96307967045b7 421 SUPERFAMILY SSF53244 287 415 6.72E-33 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL549_RS17190 bb5ad401a9e9983104e96307967045b7 421 SUPERFAMILY SSF53623 15 285 3.4E-85 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL549_RS17190 bb5ad401a9e9983104e96307967045b7 421 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 338 7.3E-7 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL549_RS17190 bb5ad401a9e9983104e96307967045b7 421 PIRSF PIRSF001563 6 421 9.5E-105 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AL549_RS17190 bb5ad401a9e9983104e96307967045b7 421 Gene3D G3DSA:3.40.1190.10 1 286 1.1E-70 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL549_RS17190 bb5ad401a9e9983104e96307967045b7 421 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 28-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AL549_RS17190 bb5ad401a9e9983104e96307967045b7 421 Gene3D G3DSA:3.90.190.20 288 420 9.2E-29 T 28-03-2018 AL549_RS17190 bb5ad401a9e9983104e96307967045b7 421 TIGRFAM TIGR01499 folC: bifunctional protein FolC 33 414 7.5E-105 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AL549_RS15365 02c791595b443bb5121bf5d656958a26 406 SUPERFAMILY SSF51556 59 358 8.33E-80 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL549_RS15365 02c791595b443bb5121bf5d656958a26 406 TIGRFAM TIGR01224 hutI: imidazolonepropionase 26 396 3.3E-152 T 28-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL549_RS15365 02c791595b443bb5121bf5d656958a26 406 Pfam PF01979 Amidohydrolase family 56 373 4.4E-13 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL549_RS15365 02c791595b443bb5121bf5d656958a26 406 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 398 40.856 T 28-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL549_RS15365 02c791595b443bb5121bf5d656958a26 406 Gene3D G3DSA:2.30.40.10 1 73 1.5E-20 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS15365 02c791595b443bb5121bf5d656958a26 406 SUPERFAMILY SSF51338 1 59 2.7E-26 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS15365 02c791595b443bb5121bf5d656958a26 406 SUPERFAMILY SSF51338 360 397 2.7E-26 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS15365 02c791595b443bb5121bf5d656958a26 406 Gene3D G3DSA:3.20.20.140 74 358 2.5E-48 T 28-03-2018 AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 SUPERFAMILY SSF51445 332 772 6.32E-144 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 6.0E-61 T 28-03-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 Gene3D G3DSA:3.20.20.80 330 817 1.2E-121 T 28-03-2018 AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 Gene3D G3DSA:3.30.379.10 204 329 1.5E-13 T 28-03-2018 AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 3.2E-48 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 3.2E-48 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 3.2E-48 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 3.2E-48 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 3.2E-48 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 3.2E-48 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 3.2E-48 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 3.2E-48 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 6.4E-13 T 28-03-2018 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 1.9E-108 T 28-03-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 3.3E-27 T 28-03-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 SUPERFAMILY SSF55545 208 331 2.24E-23 T 28-03-2018 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 Gene3D G3DSA:2.60.40.10 818 882 1.4E-8 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 SUPERFAMILY SSF81296 781 882 1.25E-36 T 28-03-2018 IPR014756 Immunoglobulin E-set AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 SUPERFAMILY SSF49384 26 198 7.74E-64 T 28-03-2018 IPR008965 Carbohydrate-binding domain GO:0030246 AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 Gene3D G3DSA:2.60.40.290 25 167 4.9E-35 T 28-03-2018 AL549_RS09065 b8cb0e57d77eec8bf0a8f79738b4c24d 883 SMART SM01081 34 195 3.5E-91 T 28-03-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL549_RS06175 a2306508b25165ac28d61a0cee8b4275 86 Pfam PF16691 Domain of unknown function (DUF5062) 6 86 2.2E-30 T 28-03-2018 IPR032036 Protein of unknown function DUF5062 AL549_RS01055 728098cff36ce11d71fa9414acc16cac 250 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 25 231 1.6E-57 T 28-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AL549_RS01055 728098cff36ce11d71fa9414acc16cac 250 Pfam PF04973 Nicotinamide mononucleotide transporter 25 228 1.7E-55 T 28-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AL549_RS17020 7a6dd733918bc4842b2e7bfa66f3d224 489 Pfam PF07693 KAP family P-loop domain 27 294 3.0E-33 T 28-03-2018 IPR011646 KAP family P-loop domain AL549_RS17020 7a6dd733918bc4842b2e7bfa66f3d224 489 SUPERFAMILY SSF52540 164 277 2.2E-14 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS17020 7a6dd733918bc4842b2e7bfa66f3d224 489 SUPERFAMILY SSF52540 26 94 2.2E-14 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS17020 7a6dd733918bc4842b2e7bfa66f3d224 489 Gene3D G3DSA:3.40.50.300 24 260 3.9E-11 T 28-03-2018 AL549_RS03045 79cd754218f1e966a5ac686e85a54b15 672 Pfam PF00009 Elongation factor Tu GTP binding domain 5 259 4.5E-28 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS03045 79cd754218f1e966a5ac686e85a54b15 672 Gene3D G3DSA:3.30.70.870 379 470 8.2E-23 T 28-03-2018 AL549_RS03045 79cd754218f1e966a5ac686e85a54b15 672 SUPERFAMILY SSF52540 2 259 3.03E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS03045 79cd754218f1e966a5ac686e85a54b15 672 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 142 2.3E-12 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL549_RS03045 79cd754218f1e966a5ac686e85a54b15 672 SUPERFAMILY SSF54211 457 577 3.54E-39 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS03045 79cd754218f1e966a5ac686e85a54b15 672 Pfam PF03764 Elongation factor G, domain IV 457 575 1.1E-38 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL549_RS03045 79cd754218f1e966a5ac686e85a54b15 672 SUPERFAMILY SSF54980 380 457 4.68E-18 T 28-03-2018 IPR035647 EF-G domain III/V-like AL549_RS03045 79cd754218f1e966a5ac686e85a54b15 672 Gene3D G3DSA:3.40.50.300 3 266 1.0E-32 T 28-03-2018 AL549_RS03045 79cd754218f1e966a5ac686e85a54b15 672 SUPERFAMILY SSF54980 581 668 1.63E-20 T 28-03-2018 IPR035647 EF-G domain III/V-like AL549_RS03045 79cd754218f1e966a5ac686e85a54b15 672 Gene3D G3DSA:3.30.230.10 471 586 1.9E-39 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL549_RS03045 79cd754218f1e966a5ac686e85a54b15 672 Pfam PF00679 Elongation factor G C-terminus 579 665 2.0E-24 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AL549_RS03045 79cd754218f1e966a5ac686e85a54b15 672 Gene3D G3DSA:2.40.30.10 268 378 6.5E-20 T 28-03-2018 AL549_RS03045 79cd754218f1e966a5ac686e85a54b15 672 Pfam PF14492 Elongation Factor G, domain II 382 455 3.2E-24 T 28-03-2018 AL549_RS03045 79cd754218f1e966a5ac686e85a54b15 672 Gene3D G3DSA:3.30.70.240 587 664 8.8E-21 T 28-03-2018 AL549_RS03045 79cd754218f1e966a5ac686e85a54b15 672 SMART SM00838 578 666 2.3E-23 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AL549_RS03045 79cd754218f1e966a5ac686e85a54b15 672 SMART SM00889 458 576 1.2E-55 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL549_RS03045 79cd754218f1e966a5ac686e85a54b15 672 SUPERFAMILY SSF50447 243 371 7.07E-22 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL549_RS08435 0c0568c83336f725727a93f3bdb23c3e 143 SUPERFAMILY SSF55961 1 142 1.37E-32 T 28-03-2018 AL549_RS08435 0c0568c83336f725727a93f3bdb23c3e 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 1.1E-30 T 28-03-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 AL549_RS08435 0c0568c83336f725727a93f3bdb23c3e 143 Gene3D G3DSA:3.30.530.20 1 142 1.9E-29 T 28-03-2018 IPR023393 START-like domain AL549_RS20475 6f4de46fad6ab0a4b6e4a7a06269b0f8 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 3.1E-24 T 28-03-2018 IPR019201 Protein of unknown function DUF2065 AL549_RS07955 8509ecbbf1d85e912ecad7a459604bb9 356 SUPERFAMILY SSF51569 8 345 2.93E-138 T 28-03-2018 AL549_RS07955 8509ecbbf1d85e912ecad7a459604bb9 356 PIRSF PIRSF001361 1 354 3.4E-162 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL549_RS07955 8509ecbbf1d85e912ecad7a459604bb9 356 Pfam PF00793 DAHP synthetase I family 42 340 7.8E-104 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL549_RS07955 8509ecbbf1d85e912ecad7a459604bb9 356 Gene3D G3DSA:3.20.20.70 9 355 1.1E-127 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS07955 8509ecbbf1d85e912ecad7a459604bb9 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 347 5.6E-162 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL549_RS09705 fac8d4c57e48473714b4815ab15e8f43 569 SUPERFAMILY SSF53448 7 235 2.06E-33 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS09705 fac8d4c57e48473714b4815ab15e8f43 569 Pfam PF00535 Glycosyl transferase family 2 8 128 4.4E-19 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL549_RS09705 fac8d4c57e48473714b4815ab15e8f43 569 Gene3D G3DSA:3.90.550.10 6 328 5.0E-24 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS09705 fac8d4c57e48473714b4815ab15e8f43 569 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 337 552 7.6E-11 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL549_RS06895 15e3edf8d431a2dc78b447f68e582f42 407 Gene3D G3DSA:3.30.70.20 4 26 0.23 T 28-03-2018 AL549_RS06895 15e3edf8d431a2dc78b447f68e582f42 407 SUPERFAMILY SSF46548 15 92 1.33E-16 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL549_RS06895 15e3edf8d431a2dc78b447f68e582f42 407 Gene3D G3DSA:3.30.70.20 74 391 3.6E-4 T 28-03-2018 AL549_RS06895 15e3edf8d431a2dc78b447f68e582f42 407 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 12 406 5.5E-219 T 28-03-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 AL549_RS06895 15e3edf8d431a2dc78b447f68e582f42 407 Pfam PF13183 4Fe-4S dicluster domain 15 79 1.1E-9 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS06895 15e3edf8d431a2dc78b447f68e582f42 407 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS06895 15e3edf8d431a2dc78b447f68e582f42 407 Gene3D G3DSA:3.30.70.20 27 73 1.5E-8 T 28-03-2018 AL549_RS06895 15e3edf8d431a2dc78b447f68e582f42 407 Pfam PF02754 Cysteine-rich domain 175 260 3.7E-16 T 28-03-2018 IPR004017 Cysteine-rich domain AL549_RS06895 15e3edf8d431a2dc78b447f68e582f42 407 Pfam PF02754 Cysteine-rich domain 304 387 7.6E-12 T 28-03-2018 IPR004017 Cysteine-rich domain AL549_RS05220 f149be31ed0faaadc6f54c6996218fa2 184 SUPERFAMILY SSF54523 7 136 1.73E-16 T 28-03-2018 AL549_RS05220 f149be31ed0faaadc6f54c6996218fa2 184 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS05220 f149be31ed0faaadc6f54c6996218fa2 184 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 5.3E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS05220 f149be31ed0faaadc6f54c6996218fa2 184 Gene3D G3DSA:3.30.700.10 7 179 1.5E-15 T 28-03-2018 AL549_RS05220 f149be31ed0faaadc6f54c6996218fa2 184 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 1.3E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS04240 0c5d2fde506adf9781785667ec1d3a2b 135 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 125 8.3E-16 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL549_RS04240 0c5d2fde506adf9781785667ec1d3a2b 135 SUPERFAMILY SSF54534 49 126 3.27E-16 T 28-03-2018 AL549_RS04240 0c5d2fde506adf9781785667ec1d3a2b 135 Pfam PF14760 Rnk N-terminus 6 43 1.3E-11 T 28-03-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain AL549_RS04240 0c5d2fde506adf9781785667ec1d3a2b 135 PIRSF PIRSF006092 13 127 1.0E-26 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AL549_RS04240 0c5d2fde506adf9781785667ec1d3a2b 135 Gene3D G3DSA:3.10.50.30 45 135 4.7E-21 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL549_RS04240 0c5d2fde506adf9781785667ec1d3a2b 135 Gene3D G3DSA:1.10.286.20 6 43 6.9E-12 T 28-03-2018 AL549_RS20075 3ab4ef9d1d6b1153067c2dfbe523665e 275 SUPERFAMILY SSF53335 5 268 1.83E-76 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS20075 3ab4ef9d1d6b1153067c2dfbe523665e 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 8.7E-18 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL549_RS20075 3ab4ef9d1d6b1153067c2dfbe523665e 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 8.7E-18 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL549_RS20075 3ab4ef9d1d6b1153067c2dfbe523665e 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 8.7E-18 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL549_RS20075 3ab4ef9d1d6b1153067c2dfbe523665e 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 8.7E-18 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL549_RS20075 3ab4ef9d1d6b1153067c2dfbe523665e 275 PIRSF PIRSF000398 1 274 1.1E-71 T 28-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AL549_RS20075 3ab4ef9d1d6b1153067c2dfbe523665e 275 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 9.8E-70 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL549_RS20075 3ab4ef9d1d6b1153067c2dfbe523665e 275 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 3.5E-94 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL549_RS20075 3ab4ef9d1d6b1153067c2dfbe523665e 275 Gene3D G3DSA:1.10.1020.10 57 142 6.6E-33 T 28-03-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 AL549_RS20075 3ab4ef9d1d6b1153067c2dfbe523665e 275 Gene3D G3DSA:3.40.50.150 143 268 2.0E-15 T 28-03-2018 AL549_RS20075 3ab4ef9d1d6b1153067c2dfbe523665e 275 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL549_RS17615 db063c92327f87cfec298fba90e15910 80 Gene3D G3DSA:3.30.110.40 1 75 7.6E-16 T 28-03-2018 IPR001455 TusA-like domain AL549_RS17615 db063c92327f87cfec298fba90e15910 80 SUPERFAMILY SSF64307 4 74 8.24E-14 T 28-03-2018 IPR001455 TusA-like domain AL549_RS17615 db063c92327f87cfec298fba90e15910 80 Pfam PF01206 Sulfurtransferase TusA 4 70 2.5E-12 T 28-03-2018 IPR001455 TusA-like domain AL549_RS09510 42f83ed3ce427a4788cf04e6c74ba35a 261 SUPERFAMILY SSF81345 2 256 2.62E-39 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL549_RS09510 42f83ed3ce427a4788cf04e6c74ba35a 261 Pfam PF00950 ABC 3 transport family 1 255 3.6E-75 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AL549_RS09510 42f83ed3ce427a4788cf04e6c74ba35a 261 Gene3D G3DSA:1.10.3470.10 1 261 4.0E-27 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL549_RS23665 72f69bb411a8c2f428c4932f93542669 164 Gene3D G3DSA:3.30.70.1150 88 161 1.0E-26 T 28-03-2018 AL549_RS23665 72f69bb411a8c2f428c4932f93542669 164 SUPERFAMILY SSF55021 79 162 6.47E-27 T 28-03-2018 AL549_RS23665 72f69bb411a8c2f428c4932f93542669 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 1.9E-25 T 28-03-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL549_RS23665 72f69bb411a8c2f428c4932f93542669 164 Gene3D G3DSA:3.30.70.260 1 87 3.5E-25 T 28-03-2018 AL549_RS23665 72f69bb411a8c2f428c4932f93542669 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 8.0E-38 T 28-03-2018 AL549_RS23665 72f69bb411a8c2f428c4932f93542669 164 Pfam PF01842 ACT domain 3 68 1.8E-16 T 28-03-2018 IPR002912 ACT domain AL549_RS23665 72f69bb411a8c2f428c4932f93542669 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 1.0E-62 T 28-03-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL549_RS23665 72f69bb411a8c2f428c4932f93542669 164 SUPERFAMILY SSF55021 2 75 9.41E-23 T 28-03-2018 AL549_RS16780 18f907b242b1d959997142e2d16e19c3 232 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 45 216 8.1E-7 T 28-03-2018 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 AL549_RS09425 a02260ed3ecd7986c302934f53fd8119 177 Gene3D G3DSA:1.20.1380.10 72 173 1.6E-40 T 28-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AL549_RS09425 a02260ed3ecd7986c302934f53fd8119 177 Pfam PF03925 SeqA protein C-terminal domain 68 175 3.1E-46 T 28-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AL549_RS09425 a02260ed3ecd7986c302934f53fd8119 177 PIRSF PIRSF019401 1 69 1.3E-18 T 28-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AL549_RS09425 a02260ed3ecd7986c302934f53fd8119 177 PIRSF PIRSF019401 63 177 9.4E-35 T 28-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AL549_RS09425 a02260ed3ecd7986c302934f53fd8119 177 SUPERFAMILY SSF82808 62 176 2.48E-49 T 28-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AL549_RS09425 a02260ed3ecd7986c302934f53fd8119 177 SUPERFAMILY SSF47598 1 34 5.78E-14 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AL549_RS09425 a02260ed3ecd7986c302934f53fd8119 177 Pfam PF17206 SeqA protein N-terminal domain 1 36 1.3E-24 T 28-03-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal AL549_RS09425 a02260ed3ecd7986c302934f53fd8119 177 Gene3D G3DSA:1.10.1220.10 1 37 1.5E-25 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL549_RS09425 a02260ed3ecd7986c302934f53fd8119 177 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 177 41.617 T 28-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AL549_RS18050 3b83e2d18b9e551c90251cb5aad7abf5 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 28-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AL549_RS18050 3b83e2d18b9e551c90251cb5aad7abf5 181 SUPERFAMILY SSF50891 19 180 1.33E-54 T 28-03-2018 IPR029000 Cyclophilin-like domain AL549_RS18050 3b83e2d18b9e551c90251cb5aad7abf5 181 PIRSF PIRSF001467 5 179 4.2E-24 T 28-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AL549_RS18050 3b83e2d18b9e551c90251cb5aad7abf5 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 178 9.4E-45 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL549_RS18050 3b83e2d18b9e551c90251cb5aad7abf5 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 6.2E-11 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL549_RS18050 3b83e2d18b9e551c90251cb5aad7abf5 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 6.2E-11 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL549_RS18050 3b83e2d18b9e551c90251cb5aad7abf5 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 6.2E-11 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL549_RS18050 3b83e2d18b9e551c90251cb5aad7abf5 181 Gene3D G3DSA:2.40.100.10 13 181 4.6E-47 T 28-03-2018 IPR029000 Cyclophilin-like domain AL549_RS15940 42d251045e402e7ee82c07e3677c1188 403 Pfam PF01966 HD domain 166 287 2.7E-14 T 28-03-2018 IPR006674 HD domain AL549_RS15940 42d251045e402e7ee82c07e3677c1188 403 Gene3D G3DSA:1.10.3210.10 96 330 2.8E-39 T 28-03-2018 AL549_RS15940 42d251045e402e7ee82c07e3677c1188 403 SMART SM00471 161 297 1.3E-8 T 28-03-2018 IPR003607 HD/PDEase domain AL549_RS15940 42d251045e402e7ee82c07e3677c1188 403 Pfam PF11871 Domain of unknown function (DUF3391) 9 133 4.8E-20 T 28-03-2018 IPR021812 Protein of unknown function DUF3391 AL549_RS15940 42d251045e402e7ee82c07e3677c1188 403 SUPERFAMILY SSF109604 156 327 1.52E-31 T 28-03-2018 AL549_RS08660 bd22b890b14486b78a01d85e5ff6ad0e 621 Gene3D G3DSA:3.40.50.970 297 490 1.9E-63 T 28-03-2018 AL549_RS08660 bd22b890b14486b78a01d85e5ff6ad0e 621 SMART SM00861 319 483 5.5E-64 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL549_RS08660 bd22b890b14486b78a01d85e5ff6ad0e 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL549_RS08660 bd22b890b14486b78a01d85e5ff6ad0e 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 1.3E-119 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL549_RS08660 bd22b890b14486b78a01d85e5ff6ad0e 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 0.0 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL549_RS08660 bd22b890b14486b78a01d85e5ff6ad0e 621 SUPERFAMILY SSF52922 492 619 1.02E-33 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL549_RS08660 bd22b890b14486b78a01d85e5ff6ad0e 621 Gene3D G3DSA:3.40.50.920 495 621 3.1E-39 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL549_RS08660 bd22b890b14486b78a01d85e5ff6ad0e 621 SUPERFAMILY SSF52518 243 381 3.69E-76 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS08660 bd22b890b14486b78a01d85e5ff6ad0e 621 SUPERFAMILY SSF52518 9 199 3.69E-76 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS08660 bd22b890b14486b78a01d85e5ff6ad0e 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 46.131 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL549_RS08660 bd22b890b14486b78a01d85e5ff6ad0e 621 SUPERFAMILY SSF52518 317 504 4.79E-58 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS08660 bd22b890b14486b78a01d85e5ff6ad0e 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL549_RS08660 bd22b890b14486b78a01d85e5ff6ad0e 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 1.1E-28 T 28-03-2018 IPR033248 Transketolase, C-terminal domain AL549_RS08660 bd22b890b14486b78a01d85e5ff6ad0e 621 Gene3D G3DSA:3.40.50.970 3 296 1.5E-75 T 28-03-2018 AL549_RS08660 bd22b890b14486b78a01d85e5ff6ad0e 621 Pfam PF02779 Transketolase, pyrimidine binding domain 319 479 4.9E-37 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL549_RS21785 d4c00d344f0d8c0dfd261915740dd9bf 632 SUPERFAMILY SSF51905 97 261 5.52E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS21785 d4c00d344f0d8c0dfd261915740dd9bf 632 SUPERFAMILY SSF51905 6 66 5.52E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS21785 d4c00d344f0d8c0dfd261915740dd9bf 632 Gene3D G3DSA:3.50.50.60 5 264 1.5E-75 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS21785 d4c00d344f0d8c0dfd261915740dd9bf 632 Pfam PF13932 GidA associated domain 403 616 6.5E-76 T 28-03-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 AL549_RS21785 d4c00d344f0d8c0dfd261915740dd9bf 632 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AL549_RS21785 d4c00d344f0d8c0dfd261915740dd9bf 632 SMART SM01228 546 617 2.2E-43 T 28-03-2018 AL549_RS21785 d4c00d344f0d8c0dfd261915740dd9bf 632 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 621 1.5E-293 T 28-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AL549_RS21785 d4c00d344f0d8c0dfd261915740dd9bf 632 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.448 T 28-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AL549_RS21785 d4c00d344f0d8c0dfd261915740dd9bf 632 Pfam PF01134 Glucose inhibited division protein A 8 399 9.6E-170 T 28-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 AL549_RS21785 d4c00d344f0d8c0dfd261915740dd9bf 632 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AL549_RS02090 18aca5f54a70fbe059ba28b9728f5b6e 486 Pfam PF02378 Phosphotransferase system, EIIC 132 413 1.4E-32 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL549_RS02090 18aca5f54a70fbe059ba28b9728f5b6e 486 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL549_RS02090 18aca5f54a70fbe059ba28b9728f5b6e 486 SUPERFAMILY SSF55604 8 80 4.05E-18 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL549_RS02090 18aca5f54a70fbe059ba28b9728f5b6e 486 Pfam PF00367 phosphotransferase system, EIIB 11 40 1.9E-10 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL549_RS02090 18aca5f54a70fbe059ba28b9728f5b6e 486 Gene3D G3DSA:3.30.1360.60 6 83 1.6E-23 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL549_RS17330 c58156ac8ae95e99f7ae72040cd89fd2 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 31.918 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AL549_RS17330 c58156ac8ae95e99f7ae72040cd89fd2 161 Gene3D G3DSA:2.40.50.140 27 130 8.4E-31 T 28-03-2018 AL549_RS17330 c58156ac8ae95e99f7ae72040cd89fd2 161 SUPERFAMILY SSF82093 30 142 1.57E-37 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AL549_RS17330 c58156ac8ae95e99f7ae72040cd89fd2 161 Pfam PF03100 CcmE 4 136 2.0E-44 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AL549_RS16840 5ac98fa9110858efa937674a442a389b 414 Pfam PF12704 MacB-like periplasmic core domain 30 241 6.6E-16 T 28-03-2018 IPR025857 MacB-like periplasmic core domain AL549_RS16840 5ac98fa9110858efa937674a442a389b 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 1.4E-161 T 28-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AL549_RS16840 5ac98fa9110858efa937674a442a389b 414 Pfam PF02687 FtsX-like permease family 300 407 1.5E-10 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL549_RS16840 5ac98fa9110858efa937674a442a389b 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 5.7E-232 T 28-03-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 AL549_RS15180 e4163abc25b13c36d26c896b91f17cf7 81 Pfam PF07362 Post-segregation antitoxin CcdA 11 81 3.0E-28 T 28-03-2018 IPR009956 Post-segregation antitoxin CcdA AL549_RS06085 2e54ce63d042ede1129ffaddb5edf505 191 SUPERFAMILY SSF56925 26 191 3.92E-28 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS06085 2e54ce63d042ede1129ffaddb5edf505 191 Gene3D G3DSA:2.40.160.20 3 191 6.9E-24 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS06085 2e54ce63d042ede1129ffaddb5edf505 191 Pfam PF13505 Outer membrane protein beta-barrel domain 5 191 5.6E-22 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel AL549_RS05635 c2422fbb5814c6f27de7fddfc3301efb 145 Gene3D G3DSA:1.10.3440.10 4 143 4.0E-60 T 28-03-2018 IPR023132 Sama2622-like domain AL549_RS05635 c2422fbb5814c6f27de7fddfc3301efb 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 6.9E-51 T 28-03-2018 IPR021422 Protein of unknown function DUF3069 AL549_RS05635 c2422fbb5814c6f27de7fddfc3301efb 145 SUPERFAMILY SSF158675 1 145 1.01E-53 T 28-03-2018 IPR023132 Sama2622-like domain AL549_RS09500 aa7eef59fd434c8c2fd6420efe697e38 388 Pfam PF00549 CoA-ligase 262 382 1.2E-25 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL549_RS09500 aa7eef59fd434c8c2fd6420efe697e38 388 SUPERFAMILY SSF56059 1 238 1.77E-79 T 28-03-2018 AL549_RS09500 aa7eef59fd434c8c2fd6420efe697e38 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.431 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL549_RS09500 aa7eef59fd434c8c2fd6420efe697e38 388 Gene3D G3DSA:3.40.50.261 240 385 2.4E-43 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL549_RS09500 aa7eef59fd434c8c2fd6420efe697e38 388 PIRSF PIRSF001554 1 388 3.7E-155 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL549_RS09500 aa7eef59fd434c8c2fd6420efe697e38 388 Gene3D G3DSA:3.30.1490.20 21 95 4.4E-20 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL549_RS09500 aa7eef59fd434c8c2fd6420efe697e38 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 28-03-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL549_RS09500 aa7eef59fd434c8c2fd6420efe697e38 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 5.8E-174 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL549_RS09500 aa7eef59fd434c8c2fd6420efe697e38 388 SUPERFAMILY SSF52210 239 385 9.42E-55 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL549_RS09500 aa7eef59fd434c8c2fd6420efe697e38 388 Pfam PF08442 ATP-grasp domain 2 203 2.6E-79 T 28-03-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL549_RS09500 aa7eef59fd434c8c2fd6420efe697e38 388 Gene3D G3DSA:3.30.470.20 96 239 8.3E-54 T 28-03-2018 AL549_RS03955 f9bd0f49ed26345f0ef82cd2501f65b1 881 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 601 3.5E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS03955 f9bd0f49ed26345f0ef82cd2501f65b1 881 SMART SM00387 485 602 5.1E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS03955 f9bd0f49ed26345f0ef82cd2501f65b1 881 Gene3D G3DSA:3.40.50.2300 746 879 1.2E-38 T 28-03-2018 AL549_RS03955 f9bd0f49ed26345f0ef82cd2501f65b1 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 8.0E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS03955 f9bd0f49ed26345f0ef82cd2501f65b1 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 541 8.0E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS03955 f9bd0f49ed26345f0ef82cd2501f65b1 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 8.0E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS03955 f9bd0f49ed26345f0ef82cd2501f65b1 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 555 8.0E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS03955 f9bd0f49ed26345f0ef82cd2501f65b1 881 Gene3D G3DSA:1.10.287.130 363 434 4.4E-19 T 28-03-2018 AL549_RS03955 f9bd0f49ed26345f0ef82cd2501f65b1 881 SMART SM00388 373 438 3.2E-23 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS03955 f9bd0f49ed26345f0ef82cd2501f65b1 881 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 438 1.6E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS03955 f9bd0f49ed26345f0ef82cd2501f65b1 881 SUPERFAMILY SSF52172 756 876 2.28E-36 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS03955 f9bd0f49ed26345f0ef82cd2501f65b1 881 SMART SM00448 758 875 3.0E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS03955 f9bd0f49ed26345f0ef82cd2501f65b1 881 Gene3D G3DSA:3.30.565.10 442 610 4.3E-51 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS03955 f9bd0f49ed26345f0ef82cd2501f65b1 881 SUPERFAMILY SSF55874 427 604 1.83E-47 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS03955 f9bd0f49ed26345f0ef82cd2501f65b1 881 SUPERFAMILY SSF47384 358 439 1.61E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS03955 f9bd0f49ed26345f0ef82cd2501f65b1 881 Pfam PF00072 Response regulator receiver domain 760 873 9.7E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS19155 63af0a5854d04510fc9a280f76efda55 438 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 1.0E-129 T 28-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AL549_RS19155 63af0a5854d04510fc9a280f76efda55 438 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 28-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site AL549_RS19155 63af0a5854d04510fc9a280f76efda55 438 SUPERFAMILY SSF53335 76 438 5.09E-86 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS19155 63af0a5854d04510fc9a280f76efda55 438 SUPERFAMILY SSF50249 9 69 7.42E-13 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS19155 63af0a5854d04510fc9a280f76efda55 438 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 438 63.978 T 28-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AL549_RS19155 63af0a5854d04510fc9a280f76efda55 438 Pfam PF01938 TRAM domain 17 68 3.4E-12 T 28-03-2018 IPR002792 TRAM domain AL549_RS19155 63af0a5854d04510fc9a280f76efda55 438 Gene3D G3DSA:2.40.50.140 1 83 8.5E-26 T 28-03-2018 AL549_RS19155 63af0a5854d04510fc9a280f76efda55 438 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 97 437 1.1E-33 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AL549_RS19155 63af0a5854d04510fc9a280f76efda55 438 Gene3D G3DSA:3.40.50.150 84 437 4.1E-56 T 28-03-2018 AL549_RS19155 63af0a5854d04510fc9a280f76efda55 438 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site AL549_RS05755 e285d33d1d43188e3ef40faa457808e1 227 SUPERFAMILY SSF50891 92 220 1.86E-34 T 28-03-2018 IPR029000 Cyclophilin-like domain AL549_RS05755 e285d33d1d43188e3ef40faa457808e1 227 SUPERFAMILY SSF160467 7 95 7.59E-11 T 28-03-2018 AL549_RS05755 e285d33d1d43188e3ef40faa457808e1 227 Gene3D G3DSA:3.30.1360.40 6 85 1.6E-12 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AL549_RS05755 e285d33d1d43188e3ef40faa457808e1 227 Gene3D G3DSA:2.40.100.10 89 222 5.0E-38 T 28-03-2018 IPR029000 Cyclophilin-like domain AL549_RS05755 e285d33d1d43188e3ef40faa457808e1 227 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 7 202 1.2E-55 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AL549_RS05755 e285d33d1d43188e3ef40faa457808e1 227 SMART SM00796 6 204 2.7E-58 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AL549_RS21800 31949c4cc981f4daafc08fa174f62b2c 293 Gene3D G3DSA:1.10.10.730 131 178 1.5E-16 T 28-03-2018 AL549_RS21800 31949c4cc981f4daafc08fa174f62b2c 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 38 214 2.2E-56 T 28-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AL549_RS21800 31949c4cc981f4daafc08fa174f62b2c 293 SMART SM00470 40 130 1.1E-35 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL549_RS21800 31949c4cc981f4daafc08fa174f62b2c 293 Pfam PF02195 ParB-like nuclease domain 42 130 2.7E-29 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL549_RS21800 31949c4cc981f4daafc08fa174f62b2c 293 SUPERFAMILY SSF110849 43 174 1.36E-33 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL549_RS21800 31949c4cc981f4daafc08fa174f62b2c 293 Gene3D G3DSA:3.90.1530.10 27 130 1.3E-36 T 28-03-2018 AL549_RS04040 413da2ffb67c1f285e90fcdff80da4aa 614 Gene3D G3DSA:1.20.1640.10 368 604 1.6E-27 T 28-03-2018 AL549_RS04040 413da2ffb67c1f285e90fcdff80da4aa 614 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 350 592 9.9E-73 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL549_RS04040 413da2ffb67c1f285e90fcdff80da4aa 614 Pfam PF13721 SecD export protein N-terminal TM region 12 113 1.2E-23 T 28-03-2018 IPR027398 SecD export protein N-terminal TM domain AL549_RS04040 413da2ffb67c1f285e90fcdff80da4aa 614 SUPERFAMILY SSF82866 409 606 3.79E-40 T 28-03-2018 AL549_RS04040 413da2ffb67c1f285e90fcdff80da4aa 614 Pfam PF02355 Protein export membrane protein 432 600 5.3E-17 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL549_RS04040 413da2ffb67c1f285e90fcdff80da4aa 614 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 136 600 2.2E-130 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AL549_RS04040 413da2ffb67c1f285e90fcdff80da4aa 614 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 13 614 44.368 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AL549_RS04040 413da2ffb67c1f285e90fcdff80da4aa 614 Pfam PF07549 SecD/SecF GG Motif 129 153 6.3E-5 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL549_RS22885 074725d498f8d66a198fd754b8d469d7 324 Gene3D G3DSA:3.20.20.370 15 321 3.8E-35 T 28-03-2018 AL549_RS22885 074725d498f8d66a198fd754b8d469d7 324 Pfam PF01522 Polysaccharide deacetylase 60 280 1.7E-20 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AL549_RS22885 074725d498f8d66a198fd754b8d469d7 324 SUPERFAMILY SSF88713 29 103 7.51E-28 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL549_RS22885 074725d498f8d66a198fd754b8d469d7 324 SUPERFAMILY SSF88713 205 286 7.51E-28 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL549_RS10375 9fb9e7903a855491b27373f351dbafb7 316 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 7.2E-23 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL549_RS10375 9fb9e7903a855491b27373f351dbafb7 316 SUPERFAMILY SSF47616 163 312 1.81E-36 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL549_RS10375 9fb9e7903a855491b27373f351dbafb7 316 SUPERFAMILY SSF52833 31 150 3.44E-17 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS10375 9fb9e7903a855491b27373f351dbafb7 316 Gene3D G3DSA:1.20.1050.10 177 315 6.1E-43 T 28-03-2018 AL549_RS10375 9fb9e7903a855491b27373f351dbafb7 316 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 263 1.0E-13 T 28-03-2018 AL549_RS10375 9fb9e7903a855491b27373f351dbafb7 316 PIRSF PIRSF015753 5 312 3.3E-136 T 28-03-2018 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 AL549_RS10375 9fb9e7903a855491b27373f351dbafb7 316 Gene3D G3DSA:3.40.30.10 31 176 3.6E-38 T 28-03-2018 AL549_RS17665 225c23383789caa50bc16c059331ef69 281 Pfam PF13230 Glutamine amidotransferases class-II 1 256 5.1E-113 T 28-03-2018 IPR026869 Putative glutamine amidotransferase type 2 AL549_RS17665 225c23383789caa50bc16c059331ef69 281 SUPERFAMILY SSF56235 2 253 5.02E-52 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL549_RS17665 225c23383789caa50bc16c059331ef69 281 Gene3D G3DSA:3.60.20.10 1 259 1.4E-46 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 PRINTS PR00625 DnaJ domain signature 25 40 1.8E-32 T 28-03-2018 IPR001623 DnaJ domain AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 PRINTS PR00625 DnaJ domain signature 42 62 1.8E-32 T 28-03-2018 IPR001623 DnaJ domain AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 PRINTS PR00625 DnaJ domain signature 62 81 1.8E-32 T 28-03-2018 IPR001623 DnaJ domain AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 PRINTS PR00625 DnaJ domain signature 7 25 1.8E-32 T 28-03-2018 IPR001623 DnaJ domain AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 Gene3D G3DSA:2.60.260.20 257 368 2.7E-28 T 28-03-2018 AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 SUPERFAMILY SSF49493 261 346 6.28E-23 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 Gene3D G3DSA:2.60.260.20 200 256 2.8E-19 T 28-03-2018 AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 SUPERFAMILY SSF57938 136 212 4.05E-23 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 Gene3D G3DSA:2.10.230.10 147 199 4.5E-19 T 28-03-2018 AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 Gene3D G3DSA:1.10.287.110 1 116 4.2E-35 T 28-03-2018 IPR001623 DnaJ domain AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 42.93 T 28-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 Pfam PF01556 DnaJ C terminal domain 123 335 4.9E-45 T 28-03-2018 IPR002939 Chaperone DnaJ, C-terminal AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 28-03-2018 IPR018253 DnaJ domain, conserved site AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 Pfam PF00226 DnaJ domain 5 67 2.5E-27 T 28-03-2018 IPR001623 DnaJ domain AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 SMART SM00271 4 62 1.7E-31 T 28-03-2018 IPR001623 DnaJ domain AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 Pfam PF00684 DnaJ central domain 149 209 6.4E-15 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 SUPERFAMILY SSF46565 1 110 3.79E-36 T 28-03-2018 IPR001623 DnaJ domain AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 3.3E-141 T 28-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 SUPERFAMILY SSF49493 115 140 1.83E-19 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AL549_RS08495 f22db398e269900baa066e335ee4ff4f 381 SUPERFAMILY SSF49493 188 263 1.83E-19 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AL549_RS03115 39bba76b6f2b191ed7c9dcad1d7d6f9a 133 SUPERFAMILY SSF55811 2 129 2.3E-26 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL549_RS03115 39bba76b6f2b191ed7c9dcad1d7d6f9a 133 Gene3D G3DSA:3.90.79.10 3 131 3.1E-22 T 28-03-2018 AL549_RS03115 39bba76b6f2b191ed7c9dcad1d7d6f9a 133 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL549_RS03115 39bba76b6f2b191ed7c9dcad1d7d6f9a 133 Pfam PF00293 NUDIX domain 5 117 2.4E-14 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL549_RS06610 d56bfd4007f30f78d27f5ed49089df50 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.5E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS06610 d56bfd4007f30f78d27f5ed49089df50 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.5E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS06610 d56bfd4007f30f78d27f5ed49089df50 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.5E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS06610 d56bfd4007f30f78d27f5ed49089df50 283 Gene3D G3DSA:1.10.10.10 3 89 2.4E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS06610 d56bfd4007f30f78d27f5ed49089df50 283 SUPERFAMILY SSF46785 6 110 6.96E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS06610 d56bfd4007f30f78d27f5ed49089df50 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 67 4.2E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS12725 6617f584eb5520b61671844f951b091f 592 SUPERFAMILY SSF63882 191 362 8.24E-47 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL549_RS12725 6617f584eb5520b61671844f951b091f 592 Gene3D G3DSA:3.90.105.10 213 246 2.8E-8 T 28-03-2018 AL549_RS12725 6617f584eb5520b61671844f951b091f 592 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 439 472 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AL549_RS12725 6617f584eb5520b61671844f951b091f 592 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 10 166 2.2E-43 T 28-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AL549_RS12725 6617f584eb5520b61671844f951b091f 592 PIRSF PIRSF036618 1 592 0.0 T 28-03-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA AL549_RS12725 6617f584eb5520b61671844f951b091f 592 Pfam PF03453 MoeA N-terminal region (domain I and II) 194 353 1.3E-37 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL549_RS12725 6617f584eb5520b61671844f951b091f 592 Gene3D G3DSA:3.40.980.10 336 509 1.3E-52 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS12725 6617f584eb5520b61671844f951b091f 592 SUPERFAMILY SSF53218 363 508 5.23E-43 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS12725 6617f584eb5520b61671844f951b091f 592 Pfam PF00994 Probable molybdopterin binding domain 366 502 3.7E-26 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS12725 6617f584eb5520b61671844f951b091f 592 Gene3D G3DSA:2.170.190.11 247 327 6.4E-24 T 28-03-2018 AL549_RS12725 6617f584eb5520b61671844f951b091f 592 SUPERFAMILY SSF52540 8 169 7.51E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS12725 6617f584eb5520b61671844f951b091f 592 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 10 142 5.3E-48 T 28-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AL549_RS12725 6617f584eb5520b61671844f951b091f 592 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 362 499 5.6E-32 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS12725 6617f584eb5520b61671844f951b091f 592 Gene3D G3DSA:2.40.340.10 515 590 7.7E-22 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL549_RS12725 6617f584eb5520b61671844f951b091f 592 SMART SM00852 366 503 9.6E-40 T 28-03-2018 IPR001453 MoaB/Mog domain AL549_RS12725 6617f584eb5520b61671844f951b091f 592 Pfam PF03454 MoeA C-terminal region (domain IV) 517 588 9.3E-21 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL549_RS12725 6617f584eb5520b61671844f951b091f 592 Gene3D G3DSA:3.40.50.300 7 173 3.4E-25 T 28-03-2018 AL549_RS12725 6617f584eb5520b61671844f951b091f 592 SUPERFAMILY SSF63867 512 590 1.44E-22 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL549_RS21115 6fede2776f1c9028fdb1c98476cbbce5 126 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 12 117 9.0E-56 T 28-03-2018 IPR009867 Protein of unknown function DUF1422 AL549_RS21115 6fede2776f1c9028fdb1c98476cbbce5 126 Pfam PF07226 Protein of unknown function (DUF1422) 11 121 4.5E-48 T 28-03-2018 IPR009867 Protein of unknown function DUF1422 AL549_RS20760 d776d46c063259183c09fab216694503 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 4.6E-26 T 28-03-2018 IPR000362 Fumarate lyase family AL549_RS20760 d776d46c063259183c09fab216694503 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 4.6E-26 T 28-03-2018 IPR000362 Fumarate lyase family AL549_RS20760 d776d46c063259183c09fab216694503 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 4.6E-26 T 28-03-2018 IPR000362 Fumarate lyase family AL549_RS20760 d776d46c063259183c09fab216694503 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 4.6E-26 T 28-03-2018 IPR000362 Fumarate lyase family AL549_RS20760 d776d46c063259183c09fab216694503 483 SUPERFAMILY SSF48557 14 467 1.28E-143 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL549_RS20760 d776d46c063259183c09fab216694503 483 Gene3D G3DSA:1.20.200.10 152 428 2.7E-72 T 28-03-2018 AL549_RS20760 d776d46c063259183c09fab216694503 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 1.6E-254 T 28-03-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 AL549_RS20760 d776d46c063259183c09fab216694503 483 Pfam PF10415 Fumarase C C-terminus 421 473 3.9E-17 T 28-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL549_RS20760 d776d46c063259183c09fab216694503 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL549_RS20760 d776d46c063259183c09fab216694503 483 Gene3D G3DSA:1.10.275.10 13 151 2.4E-52 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AL549_RS20760 d776d46c063259183c09fab216694503 483 Pfam PF00206 Lyase 23 355 5.9E-103 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal AL549_RS20760 d776d46c063259183c09fab216694503 483 Gene3D G3DSA:1.10.40.30 429 478 7.2E-19 T 28-03-2018 AL549_RS00290 fe0ce833ee32f36c41c71f158823aa43 471 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 323 335 - T 28-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AL549_RS00290 fe0ce833ee32f36c41c71f158823aa43 471 Gene3D G3DSA:1.10.579.10 291 469 6.7E-74 T 28-03-2018 AL549_RS00290 fe0ce833ee32f36c41c71f158823aa43 471 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 343 362 - T 28-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AL549_RS00290 fe0ce833ee32f36c41c71f158823aa43 471 SUPERFAMILY SSF48173 193 469 4.32E-107 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL549_RS00290 fe0ce833ee32f36c41c71f158823aa43 471 Gene3D G3DSA:3.40.50.620 2 150 2.1E-34 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS00290 fe0ce833ee32f36c41c71f158823aa43 471 Pfam PF03441 FAD binding domain of DNA photolyase 273 465 1.1E-81 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL549_RS00290 fe0ce833ee32f36c41c71f158823aa43 471 SUPERFAMILY SSF52425 3 189 1.57E-45 T 28-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL549_RS00290 fe0ce833ee32f36c41c71f158823aa43 471 Gene3D G3DSA:1.25.40.80 151 289 3.3E-33 T 28-03-2018 AL549_RS00290 fe0ce833ee32f36c41c71f158823aa43 471 Pfam PF00875 DNA photolyase 5 164 8.0E-43 T 28-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL549_RS00290 fe0ce833ee32f36c41c71f158823aa43 471 PRINTS PR00147 DNA photolyase signature 144 160 2.7E-29 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL549_RS00290 fe0ce833ee32f36c41c71f158823aa43 471 PRINTS PR00147 DNA photolyase signature 343 361 2.7E-29 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL549_RS00290 fe0ce833ee32f36c41c71f158823aa43 471 PRINTS PR00147 DNA photolyase signature 323 339 2.7E-29 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL549_RS00290 fe0ce833ee32f36c41c71f158823aa43 471 PRINTS PR00147 DNA photolyase signature 382 396 2.7E-29 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL549_RS03120 94f84edfe9043a4f927674a2ce155822 716 Gene3D G3DSA:3.40.50.2300 579 715 2.7E-34 T 28-03-2018 AL549_RS03120 94f84edfe9043a4f927674a2ce155822 716 Pfam PF00072 Response regulator receiver domain 591 702 7.3E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS03120 94f84edfe9043a4f927674a2ce155822 716 SUPERFAMILY SSF52172 588 705 5.55E-33 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS03120 94f84edfe9043a4f927674a2ce155822 716 Gene3D G3DSA:1.10.287.130 221 295 1.9E-17 T 28-03-2018 AL549_RS03120 94f84edfe9043a4f927674a2ce155822 716 SMART SM00387 346 461 3.7E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS03120 94f84edfe9043a4f927674a2ce155822 716 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 2.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS03120 94f84edfe9043a4f927674a2ce155822 716 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 2.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS03120 94f84edfe9043a4f927674a2ce155822 716 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 2.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS03120 94f84edfe9043a4f927674a2ce155822 716 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 2.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS03120 94f84edfe9043a4f927674a2ce155822 716 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 299 8.5E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS03120 94f84edfe9043a4f927674a2ce155822 716 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 459 1.7E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS03120 94f84edfe9043a4f927674a2ce155822 716 SMART SM00388 234 299 8.6E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS03120 94f84edfe9043a4f927674a2ce155822 716 Gene3D G3DSA:3.30.565.10 303 468 4.7E-44 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS03120 94f84edfe9043a4f927674a2ce155822 716 SUPERFAMILY SSF55874 288 459 7.6E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS03120 94f84edfe9043a4f927674a2ce155822 716 SMART SM00448 589 702 3.0E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS03120 94f84edfe9043a4f927674a2ce155822 716 SUPERFAMILY SSF47384 221 300 1.53E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS12570 1bcca96b8b773e16d4e6b07f0e88ac38 377 SMART SM00382 42 225 9.4E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS12570 1bcca96b8b773e16d4e6b07f0e88ac38 377 Pfam PF08402 TOBE domain 292 371 1.3E-11 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL549_RS12570 1bcca96b8b773e16d4e6b07f0e88ac38 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 371 6.5E-156 T 28-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AL549_RS12570 1bcca96b8b773e16d4e6b07f0e88ac38 377 SUPERFAMILY SSF50331 251 371 3.97E-8 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL549_RS12570 1bcca96b8b773e16d4e6b07f0e88ac38 377 Gene3D G3DSA:3.40.50.300 13 273 6.4E-76 T 28-03-2018 AL549_RS12570 1bcca96b8b773e16d4e6b07f0e88ac38 377 Pfam PF00005 ABC transporter 35 174 3.9E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS12570 1bcca96b8b773e16d4e6b07f0e88ac38 377 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS12570 1bcca96b8b773e16d4e6b07f0e88ac38 377 SUPERFAMILY SSF52540 18 255 3.73E-88 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06030 d8863248a82cb0a5ed9d935e95bc9da2 433 SUPERFAMILY SSF53850 32 290 2.99E-28 T 28-03-2018 AL549_RS06030 d8863248a82cb0a5ed9d935e95bc9da2 433 Gene3D G3DSA:3.40.190.10 141 293 4.2E-14 T 28-03-2018 AL549_RS06030 d8863248a82cb0a5ed9d935e95bc9da2 433 Pfam PF13343 Bacterial extracellular solute-binding protein 83 295 5.3E-13 T 28-03-2018 AL549_RS06030 d8863248a82cb0a5ed9d935e95bc9da2 433 Gene3D G3DSA:3.40.190.10 32 140 3.4E-4 T 28-03-2018 AL549_RS10430 ab8fa255f310afa6bce0fd85ada1ba32 192 Gene3D G3DSA:3.40.50.880 1 192 2.0E-47 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS10430 ab8fa255f310afa6bce0fd85ada1ba32 192 Pfam PF00117 Glutamine amidotransferase class-I 6 186 1.1E-44 T 28-03-2018 IPR017926 Glutamine amidotransferase AL549_RS10430 ab8fa255f310afa6bce0fd85ada1ba32 192 SUPERFAMILY SSF52317 3 191 8.84E-48 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS10430 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 6.7E-6 T 28-03-2018 AL549_RS10430 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 6.7E-6 T 28-03-2018 AL549_RS10430 ab8fa255f310afa6bce0fd85ada1ba32 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 3.6E-55 T 28-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL549_RS10430 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 8.2E-14 T 28-03-2018 AL549_RS10430 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 8.2E-14 T 28-03-2018 AL549_RS10430 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 8.2E-14 T 28-03-2018 AL549_RS10430 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00097 Anthranilate synthase component II signature 4 18 7.2E-35 T 28-03-2018 AL549_RS10430 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00097 Anthranilate synthase component II signature 166 179 7.2E-35 T 28-03-2018 AL549_RS10430 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00097 Anthranilate synthase component II signature 104 112 7.2E-35 T 28-03-2018 AL549_RS10430 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00097 Anthranilate synthase component II signature 52 61 7.2E-35 T 28-03-2018 AL549_RS10430 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00097 Anthranilate synthase component II signature 79 90 7.2E-35 T 28-03-2018 AL549_RS10430 ab8fa255f310afa6bce0fd85ada1ba32 192 PRINTS PR00097 Anthranilate synthase component II signature 124 136 7.2E-35 T 28-03-2018 AL549_RS05060 72a5ace6b72b5bb859d89997059b7570 442 Pfam PF09850 Type VI secretion system protein DotU 52 253 2.9E-57 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU AL549_RS05060 72a5ace6b72b5bb859d89997059b7570 442 SUPERFAMILY SSF103088 311 427 7.59E-28 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS05060 72a5ace6b72b5bb859d89997059b7570 442 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 50 259 3.2E-68 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU AL549_RS05060 72a5ace6b72b5bb859d89997059b7570 442 Gene3D G3DSA:3.30.1330.60 265 442 2.0E-32 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS05060 72a5ace6b72b5bb859d89997059b7570 442 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 292 427 2.1E-51 T 28-03-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain AL549_RS05060 72a5ace6b72b5bb859d89997059b7570 442 Pfam PF00691 OmpA family 323 421 4.0E-14 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS10750 eb4c5e1447a00b9a46c120230e780139 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 5.6E-93 T 28-03-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AL549_RS10750 eb4c5e1447a00b9a46c120230e780139 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL549_RS10750 eb4c5e1447a00b9a46c120230e780139 255 PIRSF PIRSF005902 1 255 4.4E-83 T 28-03-2018 IPR001130 TatD family GO:0016788 AL549_RS10750 eb4c5e1447a00b9a46c120230e780139 255 SUPERFAMILY SSF51556 1 253 5.41E-87 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL549_RS10750 eb4c5e1447a00b9a46c120230e780139 255 Pfam PF01026 TatD related DNase 3 253 5.6E-79 T 28-03-2018 IPR001130 TatD family GO:0016788 AL549_RS10750 eb4c5e1447a00b9a46c120230e780139 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL549_RS10750 eb4c5e1447a00b9a46c120230e780139 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL549_RS10750 eb4c5e1447a00b9a46c120230e780139 255 Gene3D G3DSA:3.20.20.140 1 254 1.1E-79 T 28-03-2018 AL549_RS08280 fec17b615cd3f0004ebcec7171d2d437 316 SUPERFAMILY SSF47413 17 93 1.81E-6 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS08280 fec17b615cd3f0004ebcec7171d2d437 316 Pfam PF13413 Helix-turn-helix domain 25 83 1.7E-18 T 28-03-2018 AL549_RS08280 fec17b615cd3f0004ebcec7171d2d437 316 Gene3D G3DSA:1.10.260.40 16 115 3.1E-11 T 28-03-2018 AL549_RS08280 fec17b615cd3f0004ebcec7171d2d437 316 Pfam PF13464 Domain of unknown function (DUF4115) 241 314 2.6E-23 T 28-03-2018 IPR025194 Domain of unknown function DUF4115 AL549_RS01590 826f121334cfcf028cae98ef848fcc2e 667 SUPERFAMILY SSF58104 357 666 9.55E-71 T 28-03-2018 AL549_RS01590 826f121334cfcf028cae98ef848fcc2e 667 SMART SM01358 55 308 3.7E-42 T 28-03-2018 IPR032255 Helical bimodular sensor domain AL549_RS01590 826f121334cfcf028cae98ef848fcc2e 667 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 215 230 3.8E-21 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS01590 826f121334cfcf028cae98ef848fcc2e 667 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 502 529 3.8E-21 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS01590 826f121334cfcf028cae98ef848fcc2e 667 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 531 560 3.8E-21 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS01590 826f121334cfcf028cae98ef848fcc2e 667 SMART SM00304 337 389 4.1E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS01590 826f121334cfcf028cae98ef848fcc2e 667 Gene3D G3DSA:1.10.287.950 438 667 9.4E-51 T 28-03-2018 AL549_RS01590 826f121334cfcf028cae98ef848fcc2e 667 Gene3D G3DSA:1.10.287.950 64 437 4.6E-7 T 28-03-2018 AL549_RS01590 826f121334cfcf028cae98ef848fcc2e 667 SMART SM00283 404 665 1.6E-68 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS01590 826f121334cfcf028cae98ef848fcc2e 667 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 471 632 9.8E-43 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS21960 11d0511be51cc9ef2ed680ccb0372ca7 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 36.931 T 28-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AL549_RS21960 11d0511be51cc9ef2ed680ccb0372ca7 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 6.3E-107 T 28-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AL549_RS21960 11d0511be51cc9ef2ed680ccb0372ca7 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 28-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL549_RS21960 11d0511be51cc9ef2ed680ccb0372ca7 315 SUPERFAMILY SSF50486 208 310 3.73E-32 T 28-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AL549_RS21960 11d0511be51cc9ef2ed680ccb0372ca7 315 Gene3D G3DSA:3.10.25.10 210 314 9.5E-29 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL549_RS21960 11d0511be51cc9ef2ed680ccb0372ca7 315 Pfam PF00551 Formyl transferase 6 183 2.8E-47 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL549_RS21960 11d0511be51cc9ef2ed680ccb0372ca7 315 Gene3D G3DSA:3.40.50.170 2 209 7.1E-70 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL549_RS21960 11d0511be51cc9ef2ed680ccb0372ca7 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 1.9E-28 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL549_RS21960 11d0511be51cc9ef2ed680ccb0372ca7 315 SUPERFAMILY SSF53328 3 207 1.03E-67 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL549_RS23780 900639bdf03fa8b868f1d6a9810b383c 407 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 53.993 T 28-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AL549_RS23780 900639bdf03fa8b868f1d6a9810b383c 407 Gene3D G3DSA:1.10.3090.10 122 407 2.9E-56 T 28-03-2018 AL549_RS23780 900639bdf03fa8b868f1d6a9810b383c 407 SUPERFAMILY SSF81301 2 119 1.63E-32 T 28-03-2018 AL549_RS23780 900639bdf03fa8b868f1d6a9810b383c 407 SUPERFAMILY SSF81891 120 401 1.15E-52 T 28-03-2018 AL549_RS23780 900639bdf03fa8b868f1d6a9810b383c 407 Pfam PF01966 HD domain 229 326 3.4E-6 T 28-03-2018 IPR006674 HD domain AL549_RS23780 900639bdf03fa8b868f1d6a9810b383c 407 Gene3D G3DSA:3.30.460.10 1 121 4.0E-29 T 28-03-2018 AL549_RS23780 900639bdf03fa8b868f1d6a9810b383c 407 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 1.4E-11 T 28-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL549_RS23780 900639bdf03fa8b868f1d6a9810b383c 407 Pfam PF01743 Poly A polymerase head domain 3 122 8.0E-20 T 28-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL549_RS23780 900639bdf03fa8b868f1d6a9810b383c 407 PIRSF PIRSF000813 1 407 2.1E-199 T 28-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AL549_RS23780 900639bdf03fa8b868f1d6a9810b383c 407 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.359 T 28-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AL549_RS13960 64d5137d34ac0f5f672ac01009cffe7b 176 Pfam PF13302 Acetyltransferase (GNAT) domain 18 149 4.5E-20 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS13960 64d5137d34ac0f5f672ac01009cffe7b 176 Gene3D G3DSA:3.40.630.30 43 175 4.8E-16 T 28-03-2018 AL549_RS13960 64d5137d34ac0f5f672ac01009cffe7b 176 SUPERFAMILY SSF55729 2 173 1.09E-34 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS04555 31a2ffc8d67a15569a41ac50e7ced0cd 330 Gene3D G3DSA:3.40.50.1360 60 326 6.7E-31 T 28-03-2018 AL549_RS04555 31a2ffc8d67a15569a41ac50e7ced0cd 330 Pfam PF04198 Putative sugar-binding domain 66 320 4.7E-77 T 28-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 AL549_RS04555 31a2ffc8d67a15569a41ac50e7ced0cd 330 Gene3D G3DSA:1.10.10.60 9 59 1.8E-12 T 28-03-2018 AL549_RS04555 31a2ffc8d67a15569a41ac50e7ced0cd 330 SUPERFAMILY SSF100950 70 320 1.34E-64 T 28-03-2018 AL549_RS09645 0e5ac0f17d7a4361b3aa875b4c76a2c7 222 SMART SM00448 1 113 6.2E-42 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS09645 0e5ac0f17d7a4361b3aa875b4c76a2c7 222 Gene3D G3DSA:1.10.10.10 119 222 8.9E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS09645 0e5ac0f17d7a4361b3aa875b4c76a2c7 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 2.9E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS09645 0e5ac0f17d7a4361b3aa875b4c76a2c7 222 SUPERFAMILY SSF52172 1 167 8.11E-38 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS09645 0e5ac0f17d7a4361b3aa875b4c76a2c7 222 SMART SM00862 146 220 3.6E-16 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS09645 0e5ac0f17d7a4361b3aa875b4c76a2c7 222 Gene3D G3DSA:3.40.50.2300 1 118 1.3E-35 T 28-03-2018 AL549_RS09645 0e5ac0f17d7a4361b3aa875b4c76a2c7 222 Pfam PF00072 Response regulator receiver domain 3 112 3.0E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS03915 51a1bf9993be665ed3c28b42ea48ede3 204 PIRSF PIRSF006324 1 204 1.6E-41 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL549_RS03915 51a1bf9993be665ed3c28b42ea48ede3 204 Pfam PF01810 LysE type translocator 15 202 6.2E-31 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL549_RS00285 853984146ea50cfc6fc944a47e531af9 305 SMART SM00257 41 85 6.3E-5 T 28-03-2018 IPR018392 LysM domain AL549_RS00285 853984146ea50cfc6fc944a47e531af9 305 Gene3D G3DSA:2.40.440.10 93 234 2.2E-31 T 28-03-2018 AL549_RS00285 853984146ea50cfc6fc944a47e531af9 305 SUPERFAMILY SSF141523 97 232 1.83E-28 T 28-03-2018 AL549_RS00285 853984146ea50cfc6fc944a47e531af9 305 Gene3D G3DSA:3.10.350.10 38 86 1.2E-8 T 28-03-2018 AL549_RS00285 853984146ea50cfc6fc944a47e531af9 305 Pfam PF03734 L,D-transpeptidase catalytic domain 98 232 2.1E-20 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AL549_RS00285 853984146ea50cfc6fc944a47e531af9 305 SUPERFAMILY SSF54106 40 85 1.96E-7 T 28-03-2018 IPR018392 LysM domain AL549_RS00285 853984146ea50cfc6fc944a47e531af9 305 Pfam PF01476 LysM domain 42 85 4.4E-8 T 28-03-2018 IPR018392 LysM domain AL549_RS04940 86015eec68f7cbd73d5affee71dab74f 331 Gene3D G3DSA:3.20.20.140 3 330 1.1E-77 T 28-03-2018 AL549_RS04940 86015eec68f7cbd73d5affee71dab74f 331 SUPERFAMILY SSF51556 5 328 4.9E-79 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL549_RS04940 86015eec68f7cbd73d5affee71dab74f 331 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.485 T 28-03-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 AL549_RS04940 86015eec68f7cbd73d5affee71dab74f 331 Pfam PF00962 Adenosine/AMP deaminase 6 327 8.2E-71 T 28-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AL549_RS04940 86015eec68f7cbd73d5affee71dab74f 331 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 328 4.1E-89 T 28-03-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AL549_RS16745 6687ca2c0b35af4e193c103f086c4d9e 256 Gene3D G3DSA:3.40.50.300 2 255 5.9E-69 T 28-03-2018 AL549_RS16745 6687ca2c0b35af4e193c103f086c4d9e 256 Pfam PF00005 ABC transporter 22 181 9.3E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS16745 6687ca2c0b35af4e193c103f086c4d9e 256 SUPERFAMILY SSF52540 7 251 9.22E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16745 6687ca2c0b35af4e193c103f086c4d9e 256 SMART SM00382 31 229 1.7E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS16745 6687ca2c0b35af4e193c103f086c4d9e 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS16745 6687ca2c0b35af4e193c103f086c4d9e 256 PIRSF PIRSF039085 3 256 4.2E-119 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL549_RS18955 2dacc31f60680994300ac18093cebc3c 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.0E-26 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS18955 2dacc31f60680994300ac18093cebc3c 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.814 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS18955 2dacc31f60680994300ac18093cebc3c 82 SUPERFAMILY SSF54565 1 76 2.62E-27 T 28-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS18955 2dacc31f60680994300ac18093cebc3c 82 Pfam PF00886 Ribosomal protein S16 8 68 1.1E-22 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS18955 2dacc31f60680994300ac18093cebc3c 82 Gene3D G3DSA:3.30.1320.10 1 79 7.5E-31 T 28-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS18955 2dacc31f60680994300ac18093cebc3c 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 28-03-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS09835 3d51d91780fbb8037e73be42888fadb7 595 Gene3D G3DSA:3.30.450.20 165 287 3.3E-4 T 28-03-2018 AL549_RS09835 3d51d91780fbb8037e73be42888fadb7 595 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 589 1.3E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS09835 3d51d91780fbb8037e73be42888fadb7 595 PIRSF PIRSF036431 1 595 1.8E-204 T 28-03-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AL549_RS09835 3d51d91780fbb8037e73be42888fadb7 595 Gene3D G3DSA:3.30.565.10 440 593 3.0E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS09835 3d51d91780fbb8037e73be42888fadb7 595 Gene3D G3DSA:3.30.450.20 54 164 1.8E-23 T 28-03-2018 AL549_RS09835 3d51d91780fbb8037e73be42888fadb7 595 Gene3D G3DSA:1.10.287.130 321 436 2.0E-11 T 28-03-2018 AL549_RS09835 3d51d91780fbb8037e73be42888fadb7 595 SUPERFAMILY SSF47384 367 440 2.94E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS09835 3d51d91780fbb8037e73be42888fadb7 595 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 440 1.0E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS09835 3d51d91780fbb8037e73be42888fadb7 595 Pfam PF02743 Cache domain 34 271 9.2E-14 T 28-03-2018 IPR033479 Double Cache domain 1 AL549_RS09835 3d51d91780fbb8037e73be42888fadb7 595 SUPERFAMILY SSF103190 48 187 9.42E-31 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL549_RS09835 3d51d91780fbb8037e73be42888fadb7 595 SUPERFAMILY SSF55874 440 590 6.42E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS09835 3d51d91780fbb8037e73be42888fadb7 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 5.0E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS09835 3d51d91780fbb8037e73be42888fadb7 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 5.0E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS09835 3d51d91780fbb8037e73be42888fadb7 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 5.0E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS09835 3d51d91780fbb8037e73be42888fadb7 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 5.0E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS09835 3d51d91780fbb8037e73be42888fadb7 595 SMART SM00388 372 440 2.5E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS09835 3d51d91780fbb8037e73be42888fadb7 595 SMART SM00387 483 592 2.7E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS10540 3de0ae36398ec23173e287959b313a24 170 PIRSF PIRSF028103 1 169 3.9E-42 T 28-03-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AL549_RS10540 3de0ae36398ec23173e287959b313a24 170 Gene3D G3DSA:3.30.70.260 84 170 9.2E-11 T 28-03-2018 AL549_RS10540 3de0ae36398ec23173e287959b313a24 170 SUPERFAMILY SSF55021 89 167 5.04E-10 T 28-03-2018 AL549_RS10540 3de0ae36398ec23173e287959b313a24 170 Gene3D G3DSA:3.30.70.260 1 74 0.097 T 28-03-2018 AL549_RS10540 3de0ae36398ec23173e287959b313a24 170 Pfam PF13740 ACT domain 5 66 2.3E-9 T 28-03-2018 AL549_RS19220 58764b212bc7404ec0e358a0a6d4e7eb 325 Pfam PF17188 MucB/RseB C-terminal domain 217 311 3.2E-27 T 28-03-2018 IPR033436 MucB/RseB, C-terminal AL549_RS19220 58764b212bc7404ec0e358a0a6d4e7eb 325 Gene3D G3DSA:2.50.20.10 19 260 2.0E-22 T 28-03-2018 AL549_RS19220 58764b212bc7404ec0e358a0a6d4e7eb 325 Pfam PF03888 MucB/RseB N-terminal domain 26 195 2.1E-57 T 28-03-2018 IPR033434 MucB/RseB, N-terminal AL549_RS19220 58764b212bc7404ec0e358a0a6d4e7eb 325 PIRSF PIRSF005427 1 318 4.5E-81 T 28-03-2018 IPR005588 MucB/RseB AL549_RS11275 03db29d82e9b011bacd6341cc696e772 261 SMART SM00382 38 227 2.6E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS11275 03db29d82e9b011bacd6341cc696e772 261 Pfam PF00005 ABC transporter 30 178 3.7E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS11275 03db29d82e9b011bacd6341cc696e772 261 Gene3D G3DSA:3.40.50.300 1 258 6.1E-63 T 28-03-2018 AL549_RS11275 03db29d82e9b011bacd6341cc696e772 261 SUPERFAMILY SSF52540 3 252 1.62E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06125 0046f284ddfad67a348987819edcda48 431 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 232 248 - T 28-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL549_RS06125 0046f284ddfad67a348987819edcda48 431 Pfam PF00464 Serine hydroxymethyltransferase 19 395 5.1E-176 T 28-03-2018 AL549_RS06125 0046f284ddfad67a348987819edcda48 431 Gene3D G3DSA:3.90.1150.10 285 430 2.8E-58 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS06125 0046f284ddfad67a348987819edcda48 431 Gene3D G3DSA:3.40.640.10 47 284 3.7E-50 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS06125 0046f284ddfad67a348987819edcda48 431 SUPERFAMILY SSF53383 8 430 9.32E-183 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS06125 0046f284ddfad67a348987819edcda48 431 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 17 431 53.339 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL549_RS06125 0046f284ddfad67a348987819edcda48 431 PIRSF PIRSF000412 3 431 7.0E-169 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL549_RS21475 fb379d596c7b764770d9ab31541cf92f 444 Gene3D G3DSA:3.30.200.20 70 147 4.5E-16 T 28-03-2018 AL549_RS21475 fb379d596c7b764770d9ab31541cf92f 444 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 84 109 - T 28-03-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AL549_RS21475 fb379d596c7b764770d9ab31541cf92f 444 Gene3D G3DSA:1.10.510.10 148 429 6.9E-33 T 28-03-2018 AL549_RS21475 fb379d596c7b764770d9ab31541cf92f 444 Pfam PF00069 Protein kinase domain 78 272 2.0E-37 T 28-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AL549_RS21475 fb379d596c7b764770d9ab31541cf92f 444 SMART SM00220 78 325 6.9E-26 T 28-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AL549_RS21475 fb379d596c7b764770d9ab31541cf92f 444 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 197 209 - T 28-03-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AL549_RS21475 fb379d596c7b764770d9ab31541cf92f 444 SUPERFAMILY SSF56112 72 286 7.01E-51 T 28-03-2018 IPR011009 Protein kinase-like domain AL549_RS18170 9c0b01d35eddd095aaa003f6766b3ffc 505 Gene3D G3DSA:3.30.420.40 250 504 5.6E-78 T 28-03-2018 AL549_RS18170 9c0b01d35eddd095aaa003f6766b3ffc 505 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 57.985 T 28-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AL549_RS18170 9c0b01d35eddd095aaa003f6766b3ffc 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 5.8E-85 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AL549_RS18170 9c0b01d35eddd095aaa003f6766b3ffc 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 9.1E-227 T 28-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AL549_RS18170 9c0b01d35eddd095aaa003f6766b3ffc 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL549_RS18170 9c0b01d35eddd095aaa003f6766b3ffc 505 SUPERFAMILY SSF53067 255 497 6.29E-85 T 28-03-2018 AL549_RS18170 9c0b01d35eddd095aaa003f6766b3ffc 505 Gene3D G3DSA:3.30.420.40 1 249 2.4E-84 T 28-03-2018 AL549_RS18170 9c0b01d35eddd095aaa003f6766b3ffc 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 5.1E-60 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AL549_RS18170 9c0b01d35eddd095aaa003f6766b3ffc 505 PIRSF PIRSF000538 4 502 6.0E-175 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL549_RS18170 9c0b01d35eddd095aaa003f6766b3ffc 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL549_RS18170 9c0b01d35eddd095aaa003f6766b3ffc 505 SUPERFAMILY SSF53067 5 256 3.99E-92 T 28-03-2018 AL549_RS11660 69165abcd21edf2c6879ed272f8b5205 367 Pfam PF01259 SAICAR synthetase 22 293 4.9E-47 T 28-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL549_RS11660 69165abcd21edf2c6879ed272f8b5205 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.724 T 28-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL549_RS11660 69165abcd21edf2c6879ed272f8b5205 367 Gene3D G3DSA:3.30.470.20 134 284 2.1E-40 T 28-03-2018 AL549_RS11660 69165abcd21edf2c6879ed272f8b5205 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 1.4E-213 T 28-03-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 AL549_RS11660 69165abcd21edf2c6879ed272f8b5205 367 SUPERFAMILY SSF56104 14 344 7.19E-69 T 28-03-2018 AL549_RS11660 69165abcd21edf2c6879ed272f8b5205 367 Gene3D G3DSA:3.30.200.20 9 133 2.3E-27 T 28-03-2018 AL549_RS11660 69165abcd21edf2c6879ed272f8b5205 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 28-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL549_RS19880 714f4ce15954b4205c153a5238364d3c 587 Pfam PF15864 Protein glycosylation ligase 174 199 2.5E-11 T 28-03-2018 IPR031726 Protein glycosylation ligase domain AL549_RS19880 714f4ce15954b4205c153a5238364d3c 587 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 387 576 4.3E-64 T 28-03-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal AL549_RS19880 714f4ce15954b4205c153a5238364d3c 587 Pfam PF04932 O-Antigen ligase 221 366 5.5E-15 T 28-03-2018 IPR007016 O-antigen ligase-related AL549_RS05360 2fbb7c4ab3074eb9d4c61dd397bceb04 244 SUPERFAMILY SSF55781 80 239 3.14E-32 T 28-03-2018 IPR029016 GAF domain-like AL549_RS05360 2fbb7c4ab3074eb9d4c61dd397bceb04 244 Pfam PF01614 Bacterial transcriptional regulator 130 238 1.5E-13 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL549_RS05360 2fbb7c4ab3074eb9d4c61dd397bceb04 244 Gene3D G3DSA:1.10.10.10 1 96 5.0E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS05360 2fbb7c4ab3074eb9d4c61dd397bceb04 244 SUPERFAMILY SSF46785 6 65 7.7E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS05360 2fbb7c4ab3074eb9d4c61dd397bceb04 244 Gene3D G3DSA:3.30.450.40 97 241 1.1E-33 T 28-03-2018 IPR029016 GAF domain-like AL549_RS05360 2fbb7c4ab3074eb9d4c61dd397bceb04 244 Pfam PF09339 IclR helix-turn-helix domain 13 60 1.1E-5 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL549_RS09575 0902ac8f86c3699fb9d7fb589a2860cd 233 Pfam PF00814 Glycoprotease family 30 227 1.3E-31 T 28-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL549_RS09575 0902ac8f86c3699fb9d7fb589a2860cd 233 SUPERFAMILY SSF53067 4 106 3.37E-31 T 28-03-2018 AL549_RS09575 0902ac8f86c3699fb9d7fb589a2860cd 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 3.5E-69 T 28-03-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 AL549_RS09575 0902ac8f86c3699fb9d7fb589a2860cd 233 Gene3D G3DSA:3.30.420.40 106 190 1.3E-25 T 28-03-2018 AL549_RS09575 0902ac8f86c3699fb9d7fb589a2860cd 233 SUPERFAMILY SSF53067 111 219 2.2E-28 T 28-03-2018 AL549_RS09575 0902ac8f86c3699fb9d7fb589a2860cd 233 Gene3D G3DSA:3.30.420.40 1 105 5.0E-15 T 28-03-2018 AL549_RS00680 b7132770aa64faf544d4300a55b080e7 295 SUPERFAMILY SSF103481 190 283 2.35E-15 T 28-03-2018 AL549_RS00680 b7132770aa64faf544d4300a55b080e7 295 SUPERFAMILY SSF103481 40 141 4.71E-10 T 28-03-2018 AL549_RS00680 b7132770aa64faf544d4300a55b080e7 295 Pfam PF00892 EamA-like transporter family 8 137 4.1E-12 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS00680 b7132770aa64faf544d4300a55b080e7 295 Pfam PF00892 EamA-like transporter family 149 279 1.2E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS09200 195b1f2b1aba9c39fd7c76d41bd84627 397 SUPERFAMILY SSF64518 1 397 2.62E-63 T 28-03-2018 AL549_RS09200 195b1f2b1aba9c39fd7c76d41bd84627 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 5.3E-92 T 28-03-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 AL549_RS09200 195b1f2b1aba9c39fd7c76d41bd84627 397 Gene3D G3DSA:1.20.1330.10 40 372 1.9E-19 T 28-03-2018 AL549_RS09200 195b1f2b1aba9c39fd7c76d41bd84627 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 11 142 1.9E-11 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL549_RS19720 83cf29baeef8321a9fc07d2256e19240 250 SUPERFAMILY SSF55120 7 221 1.14E-61 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS19720 83cf29baeef8321a9fc07d2256e19240 250 Pfam PF00849 RNA pseudouridylate synthase 22 174 1.2E-28 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS19720 83cf29baeef8321a9fc07d2256e19240 250 Gene3D G3DSA:3.30.2350.10 13 234 1.0E-57 T 28-03-2018 AL549_RS19720 83cf29baeef8321a9fc07d2256e19240 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS02285 bfb806bd80b7cb19f1810dc259144bfe 479 Gene3D G3DSA:2.40.160.10 60 478 1.3E-49 T 28-03-2018 AL549_RS02285 bfb806bd80b7cb19f1810dc259144bfe 479 Pfam PF03573 outer membrane porin, OprD family 55 477 7.1E-13 T 28-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AL549_RS07055 3ddbcb2a1529a5fdf652bf7203c7206b 336 SUPERFAMILY SSF53850 27 326 5.44E-63 T 28-03-2018 AL549_RS07055 3ddbcb2a1529a5fdf652bf7203c7206b 336 Gene3D G3DSA:3.40.190.10 144 277 3.5E-25 T 28-03-2018 AL549_RS07055 3ddbcb2a1529a5fdf652bf7203c7206b 336 Pfam PF13343 Bacterial extracellular solute-binding protein 75 293 1.8E-26 T 28-03-2018 AL549_RS07055 3ddbcb2a1529a5fdf652bf7203c7206b 336 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 6 333 3.3E-159 T 28-03-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative AL549_RS07055 3ddbcb2a1529a5fdf652bf7203c7206b 336 Gene3D G3DSA:3.40.190.10 27 143 2.3E-12 T 28-03-2018 AL549_RS07055 3ddbcb2a1529a5fdf652bf7203c7206b 336 PIRSF PIRSF002825 2 329 8.5E-79 T 28-03-2018 IPR026045 Ferric binding protein AL549_RS14660 156f9f307c41f7d8b25d855dffdfe4ba 56 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.0E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS03400 37a8452cd7b1e9cece05695f4850abb6 346 SUPERFAMILY SSF51735 4 203 9.0E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS03400 37a8452cd7b1e9cece05695f4850abb6 346 Gene3D G3DSA:3.30.360.10 137 346 4.2E-45 T 28-03-2018 AL549_RS03400 37a8452cd7b1e9cece05695f4850abb6 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 203 1.1E-12 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AL549_RS03400 37a8452cd7b1e9cece05695f4850abb6 346 Gene3D G3DSA:3.40.50.720 2 136 2.3E-31 T 28-03-2018 AL549_RS03400 37a8452cd7b1e9cece05695f4850abb6 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 122 4.9E-20 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AL549_RS20685 0f651e82fdceb4457c02a0594962846f 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 1.4E-23 T 28-03-2018 IPR013185 Translation elongation factor, KOW-like AL549_RS20685 0f651e82fdceb4457c02a0594962846f 188 Gene3D G3DSA:2.30.30.30 4 63 2.7E-22 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 AL549_RS20685 0f651e82fdceb4457c02a0594962846f 188 PIRSF PIRSF005901 2 188 7.9E-63 T 28-03-2018 IPR020599 Translation elongation factor P/YeiP AL549_RS20685 0f651e82fdceb4457c02a0594962846f 188 Gene3D G3DSA:2.40.50.140 67 129 6.4E-25 T 28-03-2018 AL549_RS20685 0f651e82fdceb4457c02a0594962846f 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 9.2E-25 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AL549_RS20685 0f651e82fdceb4457c02a0594962846f 188 Gene3D G3DSA:2.40.50.140 131 186 1.8E-26 T 28-03-2018 AL549_RS20685 0f651e82fdceb4457c02a0594962846f 188 SMART SM01185 69 123 3.5E-25 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AL549_RS20685 0f651e82fdceb4457c02a0594962846f 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 2.8E-22 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AL549_RS20685 0f651e82fdceb4457c02a0594962846f 188 SMART SM00841 131 186 2.2E-31 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AL549_RS20685 0f651e82fdceb4457c02a0594962846f 188 SUPERFAMILY SSF50104 2 64 3.51E-20 T 28-03-2018 IPR008991 Translation protein SH3-like domain AL549_RS20685 0f651e82fdceb4457c02a0594962846f 188 SUPERFAMILY SSF50249 130 187 4.45E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS20685 0f651e82fdceb4457c02a0594962846f 188 SUPERFAMILY SSF50249 70 128 4.71E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS20685 0f651e82fdceb4457c02a0594962846f 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 2.9E-76 T 28-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AL549_RS20685 0f651e82fdceb4457c02a0594962846f 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.852 T 28-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AL549_RS20685 0f651e82fdceb4457c02a0594962846f 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 28-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AL549_RS18825 cc8503e280200341102e9b199a193d09 453 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 12 453 37.567 T 28-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AL549_RS18825 cc8503e280200341102e9b199a193d09 453 SUPERFAMILY SSF81891 179 391 7.85E-50 T 28-03-2018 AL549_RS18825 cc8503e280200341102e9b199a193d09 453 Gene3D G3DSA:1.10.3090.10 179 425 4.4E-42 T 28-03-2018 AL549_RS18825 cc8503e280200341102e9b199a193d09 453 Gene3D G3DSA:3.30.460.10 18 177 7.6E-53 T 28-03-2018 AL549_RS18825 cc8503e280200341102e9b199a193d09 453 SUPERFAMILY SSF81301 23 178 1.0E-41 T 28-03-2018 AL549_RS18825 cc8503e280200341102e9b199a193d09 453 Pfam PF01743 Poly A polymerase head domain 52 181 6.0E-39 T 28-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL549_RS18825 cc8503e280200341102e9b199a193d09 453 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 21 448 1.2E-162 T 28-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AL549_RS18825 cc8503e280200341102e9b199a193d09 453 Pfam PF12626 Polymerase A arginine-rich C-terminus 327 442 2.4E-37 T 28-03-2018 IPR025866 Polymerase A arginine-rich C-terminal domain AL549_RS18825 cc8503e280200341102e9b199a193d09 453 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 208 269 3.0E-22 T 28-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL549_RS16420 e89e91da019088099f13e240bb38d0b2 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 1.3E-101 T 28-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL549_RS16420 e89e91da019088099f13e240bb38d0b2 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.628 T 28-03-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL549_RS16420 e89e91da019088099f13e240bb38d0b2 353 Gene3D G3DSA:3.40.50.10800 210 323 1.2E-32 T 28-03-2018 AL549_RS16420 e89e91da019088099f13e240bb38d0b2 353 Gene3D G3DSA:3.40.50.10800 25 110 9.1E-19 T 28-03-2018 AL549_RS16420 e89e91da019088099f13e240bb38d0b2 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 2.4E-114 T 28-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL549_RS16420 e89e91da019088099f13e240bb38d0b2 353 SUPERFAMILY SSF142754 29 341 1.11E-105 T 28-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL549_RS16420 e89e91da019088099f13e240bb38d0b2 353 Gene3D G3DSA:3.40.50.10800 115 209 3.0E-20 T 28-03-2018 AL549_RS02735 c87c312aa2c03973343d54752d52c455 427 Pfam PF12704 MacB-like periplasmic core domain 20 255 1.1E-24 T 28-03-2018 IPR025857 MacB-like periplasmic core domain AL549_RS02735 c87c312aa2c03973343d54752d52c455 427 Pfam PF02687 FtsX-like permease family 322 420 1.1E-11 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL549_RS17010 3f85dcf73ae6218753165d2e21659aa0 847 Pfam PF13676 TIR domain 6 104 1.9E-18 T 28-03-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AL549_RS17010 3f85dcf73ae6218753165d2e21659aa0 847 SUPERFAMILY SSF52540 197 364 1.56E-10 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS17010 3f85dcf73ae6218753165d2e21659aa0 847 Gene3D G3DSA:3.40.50.10140 2 162 2.8E-14 T 28-03-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AL549_RS17010 3f85dcf73ae6218753165d2e21659aa0 847 SUPERFAMILY SSF52200 4 152 9.42E-19 T 28-03-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AL549_RS17010 3f85dcf73ae6218753165d2e21659aa0 847 Gene3D G3DSA:3.40.50.300 173 846 3.0E-6 T 28-03-2018 AL549_RS18415 85b4d9e6c3534d9e27da25dac6627f13 459 SUPERFAMILY SSF52540 70 294 2.84E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18415 85b4d9e6c3534d9e27da25dac6627f13 459 SMART SM00382 93 247 1.4E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS18415 85b4d9e6c3534d9e27da25dac6627f13 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 7.8E-9 T 28-03-2018 AL549_RS18415 85b4d9e6c3534d9e27da25dac6627f13 459 SUPERFAMILY SSF54211 305 455 1.74E-41 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS18415 85b4d9e6c3534d9e27da25dac6627f13 459 SUPERFAMILY SSF54211 257 271 1.74E-41 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS18415 85b4d9e6c3534d9e27da25dac6627f13 459 PRINTS PR01874 DNA repair protein radA signature 85 113 7.5E-94 T 28-03-2018 AL549_RS18415 85b4d9e6c3534d9e27da25dac6627f13 459 PRINTS PR01874 DNA repair protein radA signature 176 200 7.5E-94 T 28-03-2018 AL549_RS18415 85b4d9e6c3534d9e27da25dac6627f13 459 PRINTS PR01874 DNA repair protein radA signature 324 347 7.5E-94 T 28-03-2018 AL549_RS18415 85b4d9e6c3534d9e27da25dac6627f13 459 PRINTS PR01874 DNA repair protein radA signature 215 243 7.5E-94 T 28-03-2018 AL549_RS18415 85b4d9e6c3534d9e27da25dac6627f13 459 PRINTS PR01874 DNA repair protein radA signature 10 34 7.5E-94 T 28-03-2018 AL549_RS18415 85b4d9e6c3534d9e27da25dac6627f13 459 PRINTS PR01874 DNA repair protein radA signature 126 143 7.5E-94 T 28-03-2018 AL549_RS18415 85b4d9e6c3534d9e27da25dac6627f13 459 PRINTS PR01874 DNA repair protein radA signature 250 276 7.5E-94 T 28-03-2018 AL549_RS18415 85b4d9e6c3534d9e27da25dac6627f13 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 2.6E-226 T 28-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AL549_RS18415 85b4d9e6c3534d9e27da25dac6627f13 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 43.038 T 28-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AL549_RS18415 85b4d9e6c3534d9e27da25dac6627f13 459 Gene3D G3DSA:3.30.230.10 254 459 8.6E-47 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL549_RS18415 85b4d9e6c3534d9e27da25dac6627f13 459 Gene3D G3DSA:3.40.50.300 53 253 3.0E-20 T 28-03-2018 AL549_RS18415 85b4d9e6c3534d9e27da25dac6627f13 459 Pfam PF13481 AAA domain 82 224 5.9E-13 T 28-03-2018 AL549_RS20390 63e5d9f408005892605e5653dccdd9b1 210 SMART SM00100 2 122 5.9E-27 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL549_RS20390 63e5d9f408005892605e5653dccdd9b1 210 SUPERFAMILY SSF51206 8 136 1.7E-34 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AL549_RS20390 63e5d9f408005892605e5653dccdd9b1 210 SUPERFAMILY SSF46785 139 207 3.95E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS20390 63e5d9f408005892605e5653dccdd9b1 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL549_RS20390 63e5d9f408005892605e5653dccdd9b1 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 28-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AL549_RS20390 63e5d9f408005892605e5653dccdd9b1 210 SMART SM00419 160 208 4.2E-17 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL549_RS20390 63e5d9f408005892605e5653dccdd9b1 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL549_RS20390 63e5d9f408005892605e5653dccdd9b1 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL549_RS20390 63e5d9f408005892605e5653dccdd9b1 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 28-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site AL549_RS20390 63e5d9f408005892605e5653dccdd9b1 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 28-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site AL549_RS20390 63e5d9f408005892605e5653dccdd9b1 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.4E-23 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL549_RS20390 63e5d9f408005892605e5653dccdd9b1 210 Gene3D G3DSA:2.60.120.10 4 144 3.1E-33 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS20390 63e5d9f408005892605e5653dccdd9b1 210 Gene3D G3DSA:1.10.10.10 145 210 7.4E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS11300 543554131c1939a0e5a5952e5898abf7 345 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 322 342 1.9E-6 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS11300 543554131c1939a0e5a5952e5898abf7 345 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 305 322 1.9E-6 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS11300 543554131c1939a0e5a5952e5898abf7 345 Gene3D G3DSA:1.10.8.60 178 231 1.1E-17 T 28-03-2018 AL549_RS11300 543554131c1939a0e5a5952e5898abf7 345 SUPERFAMILY SSF46689 285 341 1.4E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS11300 543554131c1939a0e5a5952e5898abf7 345 SUPERFAMILY SSF52540 4 237 1.77E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11300 543554131c1939a0e5a5952e5898abf7 345 SMART SM00382 25 177 4.1E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS11300 543554131c1939a0e5a5952e5898abf7 345 Pfam PF00158 Sigma-54 interaction domain 5 168 1.5E-58 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL549_RS11300 543554131c1939a0e5a5952e5898abf7 345 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL549_RS11300 543554131c1939a0e5a5952e5898abf7 345 Gene3D G3DSA:1.10.10.60 232 341 1.7E-8 T 28-03-2018 AL549_RS11300 543554131c1939a0e5a5952e5898abf7 345 Gene3D G3DSA:3.40.50.300 1 176 8.6E-26 T 28-03-2018 AL549_RS11300 543554131c1939a0e5a5952e5898abf7 345 Pfam PF02954 Bacterial regulatory protein, Fis family 305 333 8.3E-6 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS11300 543554131c1939a0e5a5952e5898abf7 345 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 339 5.4E-168 T 28-03-2018 IPR014317 Transcription activator PspF AL549_RS11300 543554131c1939a0e5a5952e5898abf7 345 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL549_RS11300 543554131c1939a0e5a5952e5898abf7 345 PRINTS PR00819 CbxX/CfqX superfamily signature 1 7 8.5E-5 T 28-03-2018 IPR000641 CbxX/CfqX GO:0005524 AL549_RS11300 543554131c1939a0e5a5952e5898abf7 345 PRINTS PR00819 CbxX/CfqX superfamily signature 88 107 8.5E-5 T 28-03-2018 IPR000641 CbxX/CfqX GO:0005524 AL549_RS11300 543554131c1939a0e5a5952e5898abf7 345 PRINTS PR00819 CbxX/CfqX superfamily signature 222 234 8.5E-5 T 28-03-2018 IPR000641 CbxX/CfqX GO:0005524 AL549_RS22830 b9a1ed2c6427cf6633c0b0d859421578 353 SMART SM00116 6 54 0.002 T 28-03-2018 IPR000644 CBS domain AL549_RS22830 b9a1ed2c6427cf6633c0b0d859421578 353 SMART SM00116 70 118 1.7 T 28-03-2018 IPR000644 CBS domain AL549_RS22830 b9a1ed2c6427cf6633c0b0d859421578 353 Pfam PF00483 Nucleotidyl transferase 125 347 9.7E-37 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL549_RS22830 b9a1ed2c6427cf6633c0b0d859421578 353 SUPERFAMILY SSF54631 6 56 4.24E-9 T 28-03-2018 AL549_RS22830 b9a1ed2c6427cf6633c0b0d859421578 353 Gene3D G3DSA:3.10.580.10 5 116 8.4E-17 T 28-03-2018 AL549_RS22830 b9a1ed2c6427cf6633c0b0d859421578 353 Pfam PF00571 CBS domain 9 54 3.6E-8 T 28-03-2018 IPR000644 CBS domain AL549_RS22830 b9a1ed2c6427cf6633c0b0d859421578 353 SUPERFAMILY SSF53448 48 347 3.52E-68 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS22830 b9a1ed2c6427cf6633c0b0d859421578 353 Gene3D G3DSA:3.90.550.10 120 350 2.8E-52 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS17140 dd0f153fb787553dbcb4e183f9cc8b87 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.506 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL549_RS17140 dd0f153fb787553dbcb4e183f9cc8b87 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 4.0E-39 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL549_RS17140 dd0f153fb787553dbcb4e183f9cc8b87 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 1.7E-34 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL549_RS17140 dd0f153fb787553dbcb4e183f9cc8b87 109 SUPERFAMILY SSF82607 11 103 2.09E-36 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL549_RS17140 dd0f153fb787553dbcb4e183f9cc8b87 109 PIRSF PIRSF004555 3 109 7.3E-40 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL549_RS17140 dd0f153fb787553dbcb4e183f9cc8b87 109 Gene3D G3DSA:3.30.1310.10 1 109 1.1E-45 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL549_RS05520 a47c1b962bec0b8f4d4ef8485c01612e 521 Pfam PF08811 Protein of unknown function (DUF1800) 48 518 1.3E-93 T 28-03-2018 IPR014917 Protein of unknown function DUF1800 AL549_RS05000 814c93333308f28ce9edfe7b8b35fea0 110 Gene3D G3DSA:3.30.1360.20 8 110 1.4E-31 T 28-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AL549_RS05000 814c93333308f28ce9edfe7b8b35fea0 110 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 109 21.734 T 28-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AL549_RS05000 814c93333308f28ce9edfe7b8b35fea0 110 SUPERFAMILY SSF55248 16 109 4.58E-34 T 28-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AL549_RS05000 814c93333308f28ce9edfe7b8b35fea0 110 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 17 108 2.2E-32 T 28-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AL549_RS09420 408567e1423ad62ccaa4daf0fc45419a 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 2.2E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS09420 408567e1423ad62ccaa4daf0fc45419a 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 2.2E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS09420 408567e1423ad62ccaa4daf0fc45419a 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 2.2E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS09420 408567e1423ad62ccaa4daf0fc45419a 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 2.2E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS09420 408567e1423ad62ccaa4daf0fc45419a 255 PRINTS PR00412 Epoxide hydrolase signature 230 252 3.5E-7 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL549_RS09420 408567e1423ad62ccaa4daf0fc45419a 255 PRINTS PR00412 Epoxide hydrolase signature 82 95 3.5E-7 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL549_RS09420 408567e1423ad62ccaa4daf0fc45419a 255 PRINTS PR00412 Epoxide hydrolase signature 96 109 3.5E-7 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL549_RS09420 408567e1423ad62ccaa4daf0fc45419a 255 PRINTS PR00412 Epoxide hydrolase signature 39 54 3.5E-7 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL549_RS09420 408567e1423ad62ccaa4daf0fc45419a 255 Gene3D G3DSA:3.40.50.1820 7 255 6.1E-49 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS09420 408567e1423ad62ccaa4daf0fc45419a 255 Pfam PF12697 Alpha/beta hydrolase family 16 247 2.7E-24 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS09420 408567e1423ad62ccaa4daf0fc45419a 255 SUPERFAMILY SSF53474 5 253 2.26E-53 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS23500 c7a2999613e2ac02b8f75ef34d62e2b4 84 Gene3D G3DSA:3.30.300.90 1 83 2.3E-25 T 28-03-2018 AL549_RS23500 c7a2999613e2ac02b8f75ef34d62e2b4 84 SUPERFAMILY SSF82657 4 82 7.85E-29 T 28-03-2018 IPR002634 BolA protein AL549_RS23500 c7a2999613e2ac02b8f75ef34d62e2b4 84 Pfam PF01722 BolA-like protein 20 74 4.4E-15 T 28-03-2018 IPR002634 BolA protein AL549_RS23500 c7a2999613e2ac02b8f75ef34d62e2b4 84 PIRSF PIRSF003113 2 83 1.0E-22 T 28-03-2018 IPR002634 BolA protein AL549_RS08670 de2b79ed26cf3eb87de5bd2f0b015b1b 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 9.0E-22 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL549_RS08670 de2b79ed26cf3eb87de5bd2f0b015b1b 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 47 3.0E-20 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL549_RS08670 de2b79ed26cf3eb87de5bd2f0b015b1b 80 SUPERFAMILY SSF116842 2 72 4.71E-21 T 28-03-2018 AL549_RS08670 de2b79ed26cf3eb87de5bd2f0b015b1b 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.346 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL549_RS08670 de2b79ed26cf3eb87de5bd2f0b015b1b 80 PIRSF PIRSF006488 1 77 1.3E-21 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL549_RS08670 de2b79ed26cf3eb87de5bd2f0b015b1b 80 Gene3D G3DSA:1.10.287.1040 8 72 9.4E-23 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL549_RS08670 de2b79ed26cf3eb87de5bd2f0b015b1b 80 Pfam PF02609 Exonuclease VII small subunit 11 61 7.5E-19 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL549_RS09350 0377a5b0e2066d90ac0a6c2d0982393a 336 Gene3D G3DSA:3.40.50.1400 190 317 6.6E-40 T 28-03-2018 AL549_RS09350 0377a5b0e2066d90ac0a6c2d0982393a 336 Gene3D G3DSA:3.40.50.1400 18 189 2.4E-44 T 28-03-2018 AL549_RS09350 0377a5b0e2066d90ac0a6c2d0982393a 336 TIGRFAM TIGR00109 hemH: ferrochelatase 21 335 5.1E-101 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL549_RS09350 0377a5b0e2066d90ac0a6c2d0982393a 336 SUPERFAMILY SSF53800 22 335 7.19E-99 T 28-03-2018 AL549_RS09350 0377a5b0e2066d90ac0a6c2d0982393a 336 ProSitePatterns PS00534 Ferrochelatase signature. 206 224 - T 28-03-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL549_RS09350 0377a5b0e2066d90ac0a6c2d0982393a 336 Pfam PF00762 Ferrochelatase 23 335 3.7E-107 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL549_RS09350 0377a5b0e2066d90ac0a6c2d0982393a 336 Hamap MF_00323 Ferrochelatase [hemH]. 22 336 35.789 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL549_RS03575 a5f7974106bcb83b566edb37d6130014 687 Gene3D G3DSA:2.170.130.10 41 188 3.1E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL549_RS03575 a5f7974106bcb83b566edb37d6130014 687 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 687 3.6E-148 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL549_RS03575 a5f7974106bcb83b566edb37d6130014 687 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 670 687 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL549_RS03575 a5f7974106bcb83b566edb37d6130014 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 179 7.2E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL549_RS03575 a5f7974106bcb83b566edb37d6130014 687 Pfam PF00593 TonB dependent receptor 296 685 3.8E-31 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL549_RS03575 a5f7974106bcb83b566edb37d6130014 687 Gene3D G3DSA:2.40.170.20 189 687 1.1E-61 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL549_RS03575 a5f7974106bcb83b566edb37d6130014 687 SUPERFAMILY SSF56935 47 687 1.28E-94 T 28-03-2018 AL549_RS22720 bfbe64a7711768ed2af6878b360b1116 196 Gene3D G3DSA:1.10.10.60 3 56 1.3E-12 T 28-03-2018 AL549_RS22720 bfbe64a7711768ed2af6878b360b1116 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 58 5.0E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS22720 bfbe64a7711768ed2af6878b360b1116 196 SUPERFAMILY SSF46689 5 78 4.03E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS22720 bfbe64a7711768ed2af6878b360b1116 196 Gene3D G3DSA:1.10.357.10 57 196 6.0E-21 T 28-03-2018 AL549_RS22720 bfbe64a7711768ed2af6878b360b1116 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.159 T 28-03-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 AL549_RS22720 bfbe64a7711768ed2af6878b360b1116 196 SUPERFAMILY SSF48498 81 191 1.73E-10 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL549_RS08230 dcdfd6e09a2168cf83324cc3b4ce2703 404 SUPERFAMILY SSF53383 5 391 1.02E-115 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS08230 dcdfd6e09a2168cf83324cc3b4ce2703 404 Gene3D G3DSA:3.90.1150.10 232 404 9.3E-56 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS08230 dcdfd6e09a2168cf83324cc3b4ce2703 404 Pfam PF00266 Aminotransferase class-V 5 368 1.5E-89 T 28-03-2018 IPR000192 Aminotransferase class V domain AL549_RS08230 dcdfd6e09a2168cf83324cc3b4ce2703 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.471 T 28-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AL549_RS08230 dcdfd6e09a2168cf83324cc3b4ce2703 404 PIRSF PIRSF005572 2 384 1.7E-138 T 28-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AL549_RS08230 dcdfd6e09a2168cf83324cc3b4ce2703 404 Gene3D G3DSA:3.40.640.10 1 231 9.1E-53 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS08230 dcdfd6e09a2168cf83324cc3b4ce2703 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL549_RS08230 dcdfd6e09a2168cf83324cc3b4ce2703 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 1.2E-229 T 28-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AL549_RS21880 7a2ed4cd7e2c1b62209973b94b1959b0 613 SUPERFAMILY SSF52016 421 608 1.33E-61 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL549_RS21880 7a2ed4cd7e2c1b62209973b94b1959b0 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL549_RS21880 7a2ed4cd7e2c1b62209973b94b1959b0 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 1.7E-266 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL549_RS21880 7a2ed4cd7e2c1b62209973b94b1959b0 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL549_RS21880 7a2ed4cd7e2c1b62209973b94b1959b0 613 Pfam PF00920 Dehydratase family 34 604 4.1E-220 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL549_RS21880 7a2ed4cd7e2c1b62209973b94b1959b0 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.166 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL549_RS21880 7a2ed4cd7e2c1b62209973b94b1959b0 613 SUPERFAMILY SSF143975 3 420 7.06E-136 T 28-03-2018 AL549_RS16965 77932c6577706bb6ae5e7942b081708d 154 Pfam PF11008 Protein of unknown function (DUF2846) 15 126 5.2E-32 T 28-03-2018 IPR022548 Domain of unknown function DUF2846 AL549_RS16965 77932c6577706bb6ae5e7942b081708d 154 PIRSF PIRSF012335 1 154 3.4E-73 T 28-03-2018 IPR016596 Protein of unknown function UCP012335 AL549_RS20880 95bc9654ea635a16c83777292ef10924 530 Gene3D G3DSA:3.40.140.20 227 375 1.5E-55 T 28-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL549_RS20880 95bc9654ea635a16c83777292ef10924 530 SMART SM00851 19 132 1.4E-61 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL549_RS20880 95bc9654ea635a16c83777292ef10924 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 6.1E-119 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL549_RS20880 95bc9654ea635a16c83777292ef10924 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.89 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL549_RS20880 95bc9654ea635a16c83777292ef10924 530 Pfam PF02142 MGS-like domain 19 132 8.2E-31 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL549_RS20880 95bc9654ea635a16c83777292ef10924 530 Gene3D G3DSA:3.40.140.20 376 520 8.4E-54 T 28-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL549_RS20880 95bc9654ea635a16c83777292ef10924 530 SUPERFAMILY SSF52335 7 197 7.72E-72 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL549_RS20880 95bc9654ea635a16c83777292ef10924 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 1.0E-260 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL549_RS20880 95bc9654ea635a16c83777292ef10924 530 Gene3D G3DSA:3.40.50.1380 1 196 7.6E-79 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AL549_RS20880 95bc9654ea635a16c83777292ef10924 530 SMART SM00798 137 462 7.0E-218 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL549_RS20880 95bc9654ea635a16c83777292ef10924 530 SUPERFAMILY SSF53927 222 530 6.32E-131 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL549_RS20880 95bc9654ea635a16c83777292ef10924 530 PIRSF PIRSF000414 1 530 3.3E-229 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL549_RS07040 98cdc87a89344e1f156d8a390bad8e9e 574 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 32 574 4.2E-257 T 28-03-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative AL549_RS07040 98cdc87a89344e1f156d8a390bad8e9e 574 Gene3D G3DSA:1.10.3720.10 30 290 2.1E-35 T 28-03-2018 AL549_RS07040 98cdc87a89344e1f156d8a390bad8e9e 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 393 563 8.3E-9 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS07040 98cdc87a89344e1f156d8a390bad8e9e 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 287 2.7E-10 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS07040 98cdc87a89344e1f156d8a390bad8e9e 574 Gene3D G3DSA:1.10.3720.10 352 567 2.0E-21 T 28-03-2018 AL549_RS07040 98cdc87a89344e1f156d8a390bad8e9e 574 SUPERFAMILY SSF161098 30 284 4.69E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS07040 98cdc87a89344e1f156d8a390bad8e9e 574 SUPERFAMILY SSF161098 308 558 1.1E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS08355 3c0db2a4e7ed4983874fc91dfcf49b0f 417 SUPERFAMILY SSF51905 1 54 1.81E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS08355 3c0db2a4e7ed4983874fc91dfcf49b0f 417 SUPERFAMILY SSF51905 360 406 1.81E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS08355 3c0db2a4e7ed4983874fc91dfcf49b0f 417 SUPERFAMILY SSF51905 107 270 1.81E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS08355 3c0db2a4e7ed4983874fc91dfcf49b0f 417 Pfam PF01266 FAD dependent oxidoreductase 3 397 5.6E-71 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL549_RS08355 3c0db2a4e7ed4983874fc91dfcf49b0f 417 SUPERFAMILY SSF54373 270 360 1.7E-17 T 28-03-2018 AL549_RS08355 3c0db2a4e7ed4983874fc91dfcf49b0f 417 Gene3D G3DSA:3.50.50.60 211 230 0.13 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS08355 3c0db2a4e7ed4983874fc91dfcf49b0f 417 Gene3D G3DSA:3.40.50.720 1 126 2.1E-8 T 28-03-2018 AL549_RS08355 3c0db2a4e7ed4983874fc91dfcf49b0f 417 Gene3D G3DSA:3.30.9.10 231 359 7.6E-24 T 28-03-2018 AL549_RS08355 3c0db2a4e7ed4983874fc91dfcf49b0f 417 Gene3D G3DSA:3.30.9.10 134 210 4.1E-9 T 28-03-2018 AL549_RS08355 3c0db2a4e7ed4983874fc91dfcf49b0f 417 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 46.783 T 28-03-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 AL549_RS06710 7add27537744e11e63c6a0a6ece79165 481 Pfam PF05762 VWA domain containing CoxE-like protein 316 448 4.8E-10 T 28-03-2018 IPR008912 Uncharacterised protein family CoxE-like AL549_RS06710 7add27537744e11e63c6a0a6ece79165 481 Gene3D G3DSA:3.40.50.410 287 472 2.2E-19 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS06710 7add27537744e11e63c6a0a6ece79165 481 SMART SM00327 320 479 5.1E-5 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS06710 7add27537744e11e63c6a0a6ece79165 481 SUPERFAMILY SSF53300 317 471 1.44E-25 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS06265 fed590f5df5f6537873fee03ee829727 320 Pfam PF01882 Protein of unknown function DUF58 58 143 1.8E-21 T 28-03-2018 IPR002881 Domain of unknown function DUF58 AL549_RS06265 fed590f5df5f6537873fee03ee829727 320 SUPERFAMILY SSF53300 94 256 1.73E-6 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS06265 fed590f5df5f6537873fee03ee829727 320 Gene3D G3DSA:3.40.50.410 70 290 2.4E-20 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS01010 48c41e9a7397362c37e7c0d259be8134 250 Pfam PF10014 2OG-Fe dioxygenase 51 243 1.4E-61 T 28-03-2018 IPR018724 2OG-Fe dioxygenase AL549_RS03485 7986deb3ace491b4a4a95fb372a1db98 343 Gene3D G3DSA:3.40.50.2300 69 176 1.0E-18 T 28-03-2018 AL549_RS03485 7986deb3ace491b4a4a95fb372a1db98 343 SUPERFAMILY SSF53822 70 327 9.64E-48 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS03485 7986deb3ace491b4a4a95fb372a1db98 343 SUPERFAMILY SSF47413 12 70 1.13E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS03485 7986deb3ace491b4a4a95fb372a1db98 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 1.6E-17 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS03485 7986deb3ace491b4a4a95fb372a1db98 343 Gene3D G3DSA:3.40.50.2300 177 342 1.2E-33 T 28-03-2018 AL549_RS03485 7986deb3ace491b4a4a95fb372a1db98 343 Gene3D G3DSA:1.10.260.40 13 68 2.2E-18 T 28-03-2018 AL549_RS03485 7986deb3ace491b4a4a95fb372a1db98 343 SMART SM00354 12 82 1.0E-25 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS03485 7986deb3ace491b4a4a95fb372a1db98 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 28-03-2018 AL549_RS03485 7986deb3ace491b4a4a95fb372a1db98 343 Pfam PF13377 Periplasmic binding protein-like domain 180 339 1.6E-26 T 28-03-2018 AL549_RS01870 29efe8348a1bc1b339b6195159ec1978 256 PIRSF PIRSF028205 1 253 8.4E-117 T 28-03-2018 IPR011220 Uncharacterised conserved protein UCP028205 AL549_RS01870 29efe8348a1bc1b339b6195159ec1978 256 Pfam PF17131 Outer membrane lipoprotein-sorting protein 74 249 1.6E-37 T 28-03-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein AL549_RS01870 29efe8348a1bc1b339b6195159ec1978 256 Gene3D G3DSA:2.50.20.10 18 252 2.3E-30 T 28-03-2018 AL549_RS19010 7f30486e8f01dcca314264a411a9bb22 594 SUPERFAMILY SSF89000 297 462 5.49E-50 T 28-03-2018 AL549_RS19010 7f30486e8f01dcca314264a411a9bb22 594 SUPERFAMILY SSF51230 519 593 2.49E-21 T 28-03-2018 IPR011053 Single hybrid motif AL549_RS19010 7f30486e8f01dcca314264a411a9bb22 594 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 550 567 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL549_RS19010 7f30486e8f01dcca314264a411a9bb22 594 SUPERFAMILY SSF51569 1 300 5.86E-90 T 28-03-2018 AL549_RS19010 7f30486e8f01dcca314264a411a9bb22 594 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 588 4.1E-267 T 28-03-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 AL549_RS19010 7f30486e8f01dcca314264a411a9bb22 594 Gene3D G3DSA:1.10.10.60 399 453 2.0E-14 T 28-03-2018 AL549_RS19010 7f30486e8f01dcca314264a411a9bb22 594 Gene3D G3DSA:2.40.50.100 523 594 1.2E-20 T 28-03-2018 AL549_RS19010 7f30486e8f01dcca314264a411a9bb22 594 Gene3D G3DSA:3.20.20.70 1 284 1.9E-76 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS19010 7f30486e8f01dcca314264a411a9bb22 594 Pfam PF00364 Biotin-requiring enzyme 528 592 9.5E-18 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AL549_RS19010 7f30486e8f01dcca314264a411a9bb22 594 Pfam PF00682 HMGL-like 6 270 1.1E-59 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL549_RS19010 7f30486e8f01dcca314264a411a9bb22 594 Pfam PF02436 Conserved carboxylase domain 292 492 1.6E-57 T 28-03-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 AL549_RS10975 a4fc7a799e91ad484a7962701988234f 164 SMART SM00344 12 121 4.3E-55 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL549_RS10975 a4fc7a799e91ad484a7962701988234f 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.5E-23 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL549_RS10975 a4fc7a799e91ad484a7962701988234f 164 SUPERFAMILY SSF54909 74 158 8.98E-22 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL549_RS10975 a4fc7a799e91ad484a7962701988234f 164 Gene3D G3DSA:1.10.10.10 6 63 5.9E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS10975 a4fc7a799e91ad484a7962701988234f 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL549_RS10975 a4fc7a799e91ad484a7962701988234f 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS10975 a4fc7a799e91ad484a7962701988234f 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS10975 a4fc7a799e91ad484a7962701988234f 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS10975 a4fc7a799e91ad484a7962701988234f 164 Gene3D G3DSA:3.30.70.920 64 158 2.1E-27 T 28-03-2018 AL549_RS10975 a4fc7a799e91ad484a7962701988234f 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.2E-22 T 28-03-2018 AL549_RS10975 a4fc7a799e91ad484a7962701988234f 164 SUPERFAMILY SSF46785 12 70 2.17E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS15285 30a9054f736a283a4432e8a462acf213 206 PIRSF PIRSF006324 1 206 8.3E-53 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL549_RS15285 30a9054f736a283a4432e8a462acf213 206 Pfam PF01810 LysE type translocator 15 205 4.8E-32 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL549_RS10410 c1e686c9efbe52cbf38e4c8e67642ded 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 3.1E-98 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL549_RS10410 c1e686c9efbe52cbf38e4c8e67642ded 268 Gene3D G3DSA:3.20.20.70 2 268 3.4E-72 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS10410 c1e686c9efbe52cbf38e4c8e67642ded 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.113 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL549_RS10410 c1e686c9efbe52cbf38e4c8e67642ded 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 2.5E-104 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL549_RS10410 c1e686c9efbe52cbf38e4c8e67642ded 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 28-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL549_RS10410 c1e686c9efbe52cbf38e4c8e67642ded 268 SUPERFAMILY SSF51366 1 266 3.77E-92 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL549_RS10250 da96cd866c03606458a794ae0812a863 293 ProSitePatterns PS01068 OmpA-like domain. 220 264 - T 28-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AL549_RS10250 da96cd866c03606458a794ae0812a863 293 Pfam PF00691 OmpA family 187 282 7.8E-19 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS10250 da96cd866c03606458a794ae0812a863 293 Gene3D G3DSA:3.30.1330.60 176 292 1.8E-26 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS10250 da96cd866c03606458a794ae0812a863 293 SUPERFAMILY SSF103088 157 287 6.28E-27 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS10250 da96cd866c03606458a794ae0812a863 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 5.3E-155 T 28-03-2018 AL549_RS10250 da96cd866c03606458a794ae0812a863 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 5.3E-155 T 28-03-2018 AL549_RS10250 da96cd866c03606458a794ae0812a863 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 5.3E-155 T 28-03-2018 AL549_RS10250 da96cd866c03606458a794ae0812a863 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 5.3E-155 T 28-03-2018 AL549_RS10250 da96cd866c03606458a794ae0812a863 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 5.3E-155 T 28-03-2018 AL549_RS10250 da96cd866c03606458a794ae0812a863 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 5.3E-155 T 28-03-2018 AL549_RS10250 da96cd866c03606458a794ae0812a863 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 5.3E-155 T 28-03-2018 AL549_RS10250 da96cd866c03606458a794ae0812a863 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 5.3E-155 T 28-03-2018 AL549_RS10250 da96cd866c03606458a794ae0812a863 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 5.3E-155 T 28-03-2018 AL549_RS10250 da96cd866c03606458a794ae0812a863 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 5.3E-155 T 28-03-2018 AL549_RS10250 da96cd866c03606458a794ae0812a863 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 5.3E-155 T 28-03-2018 AL549_RS10250 da96cd866c03606458a794ae0812a863 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 5.3E-155 T 28-03-2018 AL549_RS10250 da96cd866c03606458a794ae0812a863 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 5.3E-155 T 28-03-2018 AL549_RS22875 1afacb051e0a69ab4593f0efa19d772f 825 SUPERFAMILY SSF53720 405 809 2.29E-8 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL549_RS22875 1afacb051e0a69ab4593f0efa19d772f 825 Pfam PF04443 Acyl-protein synthetase, LuxE 1 375 1.9E-181 T 28-03-2018 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723 AL549_RS22875 1afacb051e0a69ab4593f0efa19d772f 825 Pfam PF05893 Acyl-CoA reductase (LuxC) 423 818 2.3E-124 T 28-03-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 AL549_RS22875 1afacb051e0a69ab4593f0efa19d772f 825 Gene3D G3DSA:3.40.605.10 402 669 2.5E-8 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL549_RS01780 a6d2de07e26b90a593b1afa2a7ee4404 161 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 75 154 1.3E-39 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL549_RS01780 a6d2de07e26b90a593b1afa2a7ee4404 161 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 155 42.961 T 28-03-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AL549_RS01780 a6d2de07e26b90a593b1afa2a7ee4404 161 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 3 71 3.0E-6 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AL549_RS01780 a6d2de07e26b90a593b1afa2a7ee4404 161 Gene3D G3DSA:1.10.10.10 71 156 2.0E-37 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01780 a6d2de07e26b90a593b1afa2a7ee4404 161 Gene3D G3DSA:3.30.160.70 1 70 3.8E-22 T 28-03-2018 AL549_RS01780 a6d2de07e26b90a593b1afa2a7ee4404 161 SUPERFAMILY SSF53155 3 80 7.26E-20 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AL549_RS01780 a6d2de07e26b90a593b1afa2a7ee4404 161 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 76 154 7.5E-35 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL549_RS01780 a6d2de07e26b90a593b1afa2a7ee4404 161 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 125 131 - T 28-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AL549_RS01780 a6d2de07e26b90a593b1afa2a7ee4404 161 SUPERFAMILY SSF46767 74 154 7.46E-34 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL549_RS05560 dc84a9109fbf5372e14541b2ebb2bc5c 297 Gene3D G3DSA:3.60.10.10 23 295 1.0E-24 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS05560 dc84a9109fbf5372e14541b2ebb2bc5c 297 SUPERFAMILY SSF56219 27 295 4.19E-28 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS05560 dc84a9109fbf5372e14541b2ebb2bc5c 297 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 32 287 2.0E-6 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS06425 1efec038c7e8b6411d55d9edcfc9b88e 717 Pfam PF13515 Fusaric acid resistance protein-like 405 524 4.8E-23 T 28-03-2018 AL549_RS06425 1efec038c7e8b6411d55d9edcfc9b88e 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 711 0.0 T 28-03-2018 IPR010019 Integral membrane protein, YccS AL549_RS06425 1efec038c7e8b6411d55d9edcfc9b88e 717 Pfam PF12805 FUSC-like inner membrane protein yccS 68 347 3.8E-114 T 28-03-2018 IPR032692 Integral membrane protein YccS, N-terminal AL549_RS06425 1efec038c7e8b6411d55d9edcfc9b88e 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 5.3E-245 T 28-03-2018 IPR010020 Integral membrane protein, YccS/YhfK AL549_RS02060 13ba938740fd67daa1d763698bdcd2a2 288 Gene3D G3DSA:3.90.226.10 12 286 2.8E-67 T 28-03-2018 AL549_RS02060 13ba938740fd67daa1d763698bdcd2a2 288 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 283 3.8E-130 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS02060 13ba938740fd67daa1d763698bdcd2a2 288 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 35.909 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS02060 13ba938740fd67daa1d763698bdcd2a2 288 Pfam PF01039 Carboxyl transferase domain 99 239 2.9E-14 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 AL549_RS02060 13ba938740fd67daa1d763698bdcd2a2 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 5.8E-35 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS02060 13ba938740fd67daa1d763698bdcd2a2 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 5.8E-35 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS02060 13ba938740fd67daa1d763698bdcd2a2 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 5.8E-35 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS02060 13ba938740fd67daa1d763698bdcd2a2 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 5.8E-35 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS02060 13ba938740fd67daa1d763698bdcd2a2 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 5.8E-35 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL549_RS02060 13ba938740fd67daa1d763698bdcd2a2 288 SUPERFAMILY SSF52096 25 281 4.26E-82 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS13475 4f5e92e5dc69066c1b0476117efef368 153 SUPERFAMILY SSF55729 1 146 5.99E-13 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS13475 4f5e92e5dc69066c1b0476117efef368 153 Gene3D G3DSA:3.40.630.30 1 136 2.3E-9 T 28-03-2018 AL549_RS13475 4f5e92e5dc69066c1b0476117efef368 153 Pfam PF00583 Acetyltransferase (GNAT) family 45 125 8.4E-6 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS09495 3a00c90131c040317291dff445467d5c 402 Pfam PF00364 Biotin-requiring enzyme 4 76 1.0E-17 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AL549_RS09495 3a00c90131c040317291dff445467d5c 402 Gene3D G3DSA:4.10.320.10 92 160 4.6E-18 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL549_RS09495 3a00c90131c040317291dff445467d5c 402 Gene3D G3DSA:3.30.559.10 161 400 1.8E-91 T 28-03-2018 AL549_RS09495 3a00c90131c040317291dff445467d5c 402 Gene3D G3DSA:3.90.1170.30 1 48 5.3E-14 T 28-03-2018 AL549_RS09495 3a00c90131c040317291dff445467d5c 402 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 172 400 2.6E-80 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL549_RS09495 3a00c90131c040317291dff445467d5c 402 SUPERFAMILY SSF52777 172 401 2.22E-89 T 28-03-2018 AL549_RS09495 3a00c90131c040317291dff445467d5c 402 SUPERFAMILY SSF51230 1 96 5.5E-24 T 28-03-2018 IPR011053 Single hybrid motif AL549_RS09495 3a00c90131c040317291dff445467d5c 402 SUPERFAMILY SSF47005 106 149 1.23E-11 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL549_RS09495 3a00c90131c040317291dff445467d5c 402 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 402 7.4E-186 T 28-03-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AL549_RS09495 3a00c90131c040317291dff445467d5c 402 Pfam PF02817 e3 binding domain 113 146 2.3E-12 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL549_RS09495 3a00c90131c040317291dff445467d5c 402 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL549_RS18270 936434c9ba5ae617d65693463758eb89 477 Pfam PF13520 Amino acid permease 11 439 1.3E-30 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL549_RS18270 936434c9ba5ae617d65693463758eb89 477 PIRSF PIRSF006060 1 475 3.4E-49 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL549_RS01985 37982a951602d47e27db77ca39d7e235 168 SUPERFAMILY SSF50341 21 161 3.79E-30 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS01985 37982a951602d47e27db77ca39d7e235 168 SMART SM00260 20 159 1.4E-26 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS01985 37982a951602d47e27db77ca39d7e235 168 Gene3D G3DSA:2.40.50.180 139 167 0.018 T 28-03-2018 AL549_RS01985 37982a951602d47e27db77ca39d7e235 168 Gene3D G3DSA:2.30.30.40 102 138 6.7E-7 T 28-03-2018 AL549_RS01985 37982a951602d47e27db77ca39d7e235 168 Gene3D G3DSA:2.40.50.180 42 101 3.9E-14 T 28-03-2018 AL549_RS01985 37982a951602d47e27db77ca39d7e235 168 Pfam PF01584 CheW-like domain 24 160 6.3E-30 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS00200 3186872ebbaeb5992981fb62d605f0a0 323 Gene3D G3DSA:3.40.50.410 83 304 5.4E-50 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS00200 3186872ebbaeb5992981fb62d605f0a0 323 Pfam PF00092 von Willebrand factor type A domain 87 279 2.2E-35 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS00200 3186872ebbaeb5992981fb62d605f0a0 323 SMART SM00327 85 286 2.0E-22 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS00200 3186872ebbaeb5992981fb62d605f0a0 323 SUPERFAMILY SSF53300 85 282 4.01E-40 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS04170 dcb483324ecab1ddb90c34e654d9ad26 334 Gene3D G3DSA:3.40.1550.10 138 329 1.1E-28 T 28-03-2018 IPR028976 CheC-like domain AL549_RS04170 dcb483324ecab1ddb90c34e654d9ad26 334 SUPERFAMILY SSF103039 140 329 1.16E-37 T 28-03-2018 IPR028976 CheC-like domain AL549_RS04170 dcb483324ecab1ddb90c34e654d9ad26 334 Gene3D G3DSA:3.40.50.2300 2 137 3.4E-28 T 28-03-2018 AL549_RS04170 dcb483324ecab1ddb90c34e654d9ad26 334 SMART SM00448 3 115 4.2E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS04170 dcb483324ecab1ddb90c34e654d9ad26 334 Pfam PF00072 Response regulator receiver domain 5 115 2.9E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS04170 dcb483324ecab1ddb90c34e654d9ad26 334 SUPERFAMILY SSF52172 4 122 5.41E-28 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS07415 1dbe864d512e4829ca33d1e525a3192b 355 Gene3D G3DSA:2.30.42.10 255 354 3.6E-23 T 28-03-2018 AL549_RS07415 1dbe864d512e4829ca33d1e525a3192b 355 SMART SM00228 257 339 6.3E-7 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL549_RS07415 1dbe864d512e4829ca33d1e525a3192b 355 SUPERFAMILY SSF50494 43 266 2.03E-62 T 28-03-2018 IPR009003 Peptidase S1, PA clan AL549_RS07415 1dbe864d512e4829ca33d1e525a3192b 355 Gene3D G3DSA:2.40.10.10 44 147 6.8E-36 T 28-03-2018 AL549_RS07415 1dbe864d512e4829ca33d1e525a3192b 355 PRINTS PR00834 HtrA/DegQ protease family signature 187 204 9.4E-46 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL549_RS07415 1dbe864d512e4829ca33d1e525a3192b 355 PRINTS PR00834 HtrA/DegQ protease family signature 91 103 9.4E-46 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL549_RS07415 1dbe864d512e4829ca33d1e525a3192b 355 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 9.4E-46 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL549_RS07415 1dbe864d512e4829ca33d1e525a3192b 355 PRINTS PR00834 HtrA/DegQ protease family signature 209 226 9.4E-46 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL549_RS07415 1dbe864d512e4829ca33d1e525a3192b 355 PRINTS PR00834 HtrA/DegQ protease family signature 112 132 9.4E-46 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL549_RS07415 1dbe864d512e4829ca33d1e525a3192b 355 PRINTS PR00834 HtrA/DegQ protease family signature 152 176 9.4E-46 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL549_RS07415 1dbe864d512e4829ca33d1e525a3192b 355 Gene3D G3DSA:2.40.10.10 148 251 5.1E-32 T 28-03-2018 AL549_RS07415 1dbe864d512e4829ca33d1e525a3192b 355 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 352 7.0E-168 T 28-03-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 AL549_RS07415 1dbe864d512e4829ca33d1e525a3192b 355 Pfam PF13180 PDZ domain 258 347 3.2E-16 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL549_RS07415 1dbe864d512e4829ca33d1e525a3192b 355 SUPERFAMILY SSF50156 240 347 6.97E-21 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL549_RS07415 1dbe864d512e4829ca33d1e525a3192b 355 Pfam PF13365 Trypsin-like peptidase domain 82 216 8.3E-33 T 28-03-2018 AL549_RS11325 9264d3cc6699dd6e96f1ae2b1d68dc49 371 Gene3D G3DSA:2.40.50.100 41 83 0.0069 T 28-03-2018 AL549_RS11325 9264d3cc6699dd6e96f1ae2b1d68dc49 371 Gene3D G3DSA:2.40.50.100 156 339 5.4E-6 T 28-03-2018 AL549_RS11325 9264d3cc6699dd6e96f1ae2b1d68dc49 371 Pfam PF13533 Biotin-lipoyl like 71 114 2.3E-13 T 28-03-2018 AL549_RS11325 9264d3cc6699dd6e96f1ae2b1d68dc49 371 Gene3D G3DSA:3.90.1170.30 84 110 0.012 T 28-03-2018 AL549_RS11325 9264d3cc6699dd6e96f1ae2b1d68dc49 371 Pfam PF13437 HlyD family secretion protein 165 263 4.9E-8 T 28-03-2018 AL549_RS11325 9264d3cc6699dd6e96f1ae2b1d68dc49 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 363 9.4E-70 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL549_RS11325 9264d3cc6699dd6e96f1ae2b1d68dc49 371 SUPERFAMILY SSF111369 60 274 6.54E-29 T 28-03-2018 AL549_RS11325 9264d3cc6699dd6e96f1ae2b1d68dc49 371 Gene3D G3DSA:1.10.287.470 111 155 1.5E-10 T 28-03-2018 AL549_RS06840 86ae271412c5e5a2293bcae68039f517 316 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 9 151 2.2E-18 T 28-03-2018 IPR019587 Polyketide cyclase/dehydrase AL549_RS06840 86ae271412c5e5a2293bcae68039f517 316 SUPERFAMILY SSF55136 167 303 5.23E-10 T 28-03-2018 AL549_RS06840 86ae271412c5e5a2293bcae68039f517 316 Gene3D G3DSA:3.30.530.20 4 158 1.1E-18 T 28-03-2018 IPR023393 START-like domain AL549_RS06840 86ae271412c5e5a2293bcae68039f517 316 SUPERFAMILY SSF55961 10 149 4.13E-16 T 28-03-2018 AL549_RS06840 86ae271412c5e5a2293bcae68039f517 316 Gene3D G3DSA:3.20.80.10 163 311 6.0E-17 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain AL549_RS06440 56684e76833f2422a509022b1d669783 419 SUPERFAMILY SSF55035 146 261 1.03E-36 T 28-03-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL549_RS06440 56684e76833f2422a509022b1d669783 419 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 51 419 1.6E-113 T 28-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL549_RS06440 56684e76833f2422a509022b1d669783 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 344 365 2.8E-38 T 28-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL549_RS06440 56684e76833f2422a509022b1d669783 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 201 219 2.8E-38 T 28-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL549_RS06440 56684e76833f2422a509022b1d669783 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 242 267 2.8E-38 T 28-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL549_RS06440 56684e76833f2422a509022b1d669783 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 81 102 2.8E-38 T 28-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL549_RS06440 56684e76833f2422a509022b1d669783 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 291 317 2.8E-38 T 28-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL549_RS06440 56684e76833f2422a509022b1d669783 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 112 132 2.8E-38 T 28-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL549_RS06440 56684e76833f2422a509022b1d669783 419 Gene3D G3DSA:3.90.770.10 191 408 6.2E-53 T 28-03-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL549_RS06440 56684e76833f2422a509022b1d669783 419 Gene3D G3DSA:3.90.770.10 42 190 6.2E-27 T 28-03-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL549_RS06440 56684e76833f2422a509022b1d669783 419 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 356 363 - T 28-03-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL549_RS06440 56684e76833f2422a509022b1d669783 419 SUPERFAMILY SSF56542 259 409 1.28E-79 T 28-03-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL549_RS06440 56684e76833f2422a509022b1d669783 419 SUPERFAMILY SSF56542 26 143 1.28E-79 T 28-03-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL549_RS10645 2df2b10e0e999efd81eadd9f6aca37f5 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 1.0E-42 T 28-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 AL549_RS10645 2df2b10e0e999efd81eadd9f6aca37f5 213 SUPERFAMILY SSF52540 8 204 4.87E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS10645 2df2b10e0e999efd81eadd9f6aca37f5 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.47 T 28-03-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 AL549_RS10645 2df2b10e0e999efd81eadd9f6aca37f5 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 1.6E-90 T 28-03-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 AL549_RS10645 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 178 191 2.7E-36 T 28-03-2018 AL549_RS10645 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 86 101 2.7E-36 T 28-03-2018 AL549_RS10645 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 156 167 2.7E-36 T 28-03-2018 AL549_RS10645 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 142 152 2.7E-36 T 28-03-2018 AL549_RS10645 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 41 52 2.7E-36 T 28-03-2018 AL549_RS10645 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 7 24 2.7E-36 T 28-03-2018 AL549_RS10645 2df2b10e0e999efd81eadd9f6aca37f5 213 Gene3D G3DSA:3.40.50.300 3 213 3.1E-56 T 28-03-2018 AL549_RS21735 680a4076d802a365edd0c90f75a703c7 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 245 7.5E-55 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS21735 680a4076d802a365edd0c90f75a703c7 250 SUPERFAMILY SSF53850 1 248 6.09E-57 T 28-03-2018 AL549_RS21735 680a4076d802a365edd0c90f75a703c7 250 Gene3D G3DSA:3.40.190.10 126 205 1.1E-18 T 28-03-2018 AL549_RS21735 680a4076d802a365edd0c90f75a703c7 250 Gene3D G3DSA:3.40.190.10 18 125 3.5E-28 T 28-03-2018 AL549_RS21735 680a4076d802a365edd0c90f75a703c7 250 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL549_RS21735 680a4076d802a365edd0c90f75a703c7 250 SMART SM00062 26 247 3.2E-75 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS16500 bfb640922958fbeb029667606b3d46ec 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 3.4E-16 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL549_RS16500 bfb640922958fbeb029667606b3d46ec 592 SUPERFAMILY SSF50249 1 105 6.29E-34 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS16500 bfb640922958fbeb029667606b3d46ec 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 1.0E-104 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS16500 bfb640922958fbeb029667606b3d46ec 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 2.1E-266 T 28-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AL549_RS16500 bfb640922958fbeb029667606b3d46ec 592 Pfam PF02938 GAD domain 307 406 2.6E-31 T 28-03-2018 IPR029351 GAD domain Reactome: R-HSA-379726 AL549_RS16500 bfb640922958fbeb029667606b3d46ec 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS16500 bfb640922958fbeb029667606b3d46ec 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS16500 bfb640922958fbeb029667606b3d46ec 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS16500 bfb640922958fbeb029667606b3d46ec 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS16500 bfb640922958fbeb029667606b3d46ec 592 Gene3D G3DSA:2.40.50.140 1 107 4.6E-27 T 28-03-2018 AL549_RS16500 bfb640922958fbeb029667606b3d46ec 592 Gene3D G3DSA:3.30.930.10 131 586 2.6E-99 T 28-03-2018 AL549_RS16500 bfb640922958fbeb029667606b3d46ec 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.282 T 28-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AL549_RS16500 bfb640922958fbeb029667606b3d46ec 592 SUPERFAMILY SSF55681 420 582 1.07E-102 T 28-03-2018 AL549_RS16500 bfb640922958fbeb029667606b3d46ec 592 SUPERFAMILY SSF55681 108 287 1.07E-102 T 28-03-2018 AL549_RS16500 bfb640922958fbeb029667606b3d46ec 592 SUPERFAMILY SSF55261 288 419 8.34E-48 T 28-03-2018 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AL549_RS13375 e22c29fcd61b81e0c991f9b404c5f696 35 Pfam PF11665 Protein of unknown function (DUF3265) 3 29 4.7E-7 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS23790 b34837a3877cf4c73fc7870601c642e2 203 SMART SM00287 20 86 1.2E-7 T 28-03-2018 IPR003646 SH3-like domain, bacterial-type AL549_RS23790 b34837a3877cf4c73fc7870601c642e2 203 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 24 202 2.9E-53 T 28-03-2018 IPR016476 SH3 domain protein AL549_RS23790 b34837a3877cf4c73fc7870601c642e2 203 Pfam PF08239 Bacterial SH3 domain 32 82 7.2E-7 T 28-03-2018 IPR003646 SH3-like domain, bacterial-type AL549_RS23790 b34837a3877cf4c73fc7870601c642e2 203 Gene3D G3DSA:2.30.30.410 20 85 8.4E-7 T 28-03-2018 AL549_RS23790 b34837a3877cf4c73fc7870601c642e2 203 PIRSF PIRSF006158 1 203 8.5E-73 T 28-03-2018 IPR016476 SH3 domain protein AL549_RS23790 b34837a3877cf4c73fc7870601c642e2 203 Gene3D G3DSA:1.20.5.50 86 167 6.5E-6 T 28-03-2018 AL549_RS02340 2b7750e0bca7987e8258d3eb9f922ffd 293 Gene3D G3DSA:3.20.20.150 2 290 1.2E-51 T 28-03-2018 AL549_RS02340 2b7750e0bca7987e8258d3eb9f922ffd 293 SUPERFAMILY SSF51658 3 285 1.31E-54 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL549_RS02340 2b7750e0bca7987e8258d3eb9f922ffd 293 Pfam PF01261 Xylose isomerase-like TIM barrel 29 238 5.0E-34 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL549_RS02340 2b7750e0bca7987e8258d3eb9f922ffd 293 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 7 285 5.5E-101 T 28-03-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 AL549_RS07715 14c25e7af8c3d3ffc01e04272bf6b64b 819 SUPERFAMILY SSF53633 1 298 4.68E-76 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL549_RS07715 14c25e7af8c3d3ffc01e04272bf6b64b 819 Gene3D G3DSA:3.40.1160.10 1 290 3.2E-61 T 28-03-2018 AL549_RS07715 14c25e7af8c3d3ffc01e04272bf6b64b 819 SUPERFAMILY SSF55021 303 381 2.69E-21 T 28-03-2018 AL549_RS07715 14c25e7af8c3d3ffc01e04272bf6b64b 819 PIRSF PIRSF000727 1 817 0.0 T 28-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS07715 14c25e7af8c3d3ffc01e04272bf6b64b 819 SUPERFAMILY SSF51735 463 636 1.58E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS07715 14c25e7af8c3d3ffc01e04272bf6b64b 819 Gene3D G3DSA:3.40.50.720 465 635 1.4E-29 T 28-03-2018 AL549_RS07715 14c25e7af8c3d3ffc01e04272bf6b64b 819 Gene3D G3DSA:3.30.70.260 291 383 6.9E-23 T 28-03-2018 AL549_RS07715 14c25e7af8c3d3ffc01e04272bf6b64b 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 3.3E-129 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS07715 14c25e7af8c3d3ffc01e04272bf6b64b 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 28-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL549_RS07715 14c25e7af8c3d3ffc01e04272bf6b64b 819 Pfam PF00696 Amino acid kinase family 2 284 1.4E-48 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL549_RS07715 14c25e7af8c3d3ffc01e04272bf6b64b 819 Pfam PF01842 ACT domain 324 378 2.7E-9 T 28-03-2018 IPR002912 ACT domain AL549_RS07715 14c25e7af8c3d3ffc01e04272bf6b64b 819 SUPERFAMILY SSF55021 383 476 1.66E-20 T 28-03-2018 AL549_RS07715 14c25e7af8c3d3ffc01e04272bf6b64b 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS07715 14c25e7af8c3d3ffc01e04272bf6b64b 819 SUPERFAMILY SSF55347 614 797 2.03E-50 T 28-03-2018 AL549_RS07715 14c25e7af8c3d3ffc01e04272bf6b64b 819 Gene3D G3DSA:3.30.70.260 384 464 1.8E-18 T 28-03-2018 AL549_RS07715 14c25e7af8c3d3ffc01e04272bf6b64b 819 Gene3D G3DSA:3.30.360.10 636 793 1.5E-52 T 28-03-2018 AL549_RS07715 14c25e7af8c3d3ffc01e04272bf6b64b 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 1.6E-26 T 28-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AL549_RS07715 14c25e7af8c3d3ffc01e04272bf6b64b 819 Pfam PF00742 Homoserine dehydrogenase 614 810 1.9E-47 T 28-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL549_RS11355 56c44d43f60cab3815a2d8c607901bf4 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 321 503 6.6E-46 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS11355 56c44d43f60cab3815a2d8c607901bf4 538 Gene3D G3DSA:3.30.420.40 65 277 9.4E-4 T 28-03-2018 AL549_RS11355 56c44d43f60cab3815a2d8c607901bf4 538 SUPERFAMILY SSF58104 232 537 9.81E-72 T 28-03-2018 AL549_RS11355 56c44d43f60cab3815a2d8c607901bf4 538 SMART SM00283 275 536 1.1E-71 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS11355 56c44d43f60cab3815a2d8c607901bf4 538 Gene3D G3DSA:1.10.287.950 305 538 3.6E-53 T 28-03-2018 AL549_RS11355 56c44d43f60cab3815a2d8c607901bf4 538 Pfam PF00672 HAMP domain 208 256 3.5E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS11355 56c44d43f60cab3815a2d8c607901bf4 538 SMART SM00304 207 260 4.3E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS11135 61aec7809a86773a4f27fe7ea9730b56 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.571 T 28-03-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AL549_RS11135 61aec7809a86773a4f27fe7ea9730b56 245 Gene3D G3DSA:3.20.20.70 1 245 2.4E-52 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS11135 61aec7809a86773a4f27fe7ea9730b56 245 Pfam PF00977 Histidine biosynthesis protein 2 234 1.3E-75 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 AL549_RS11135 61aec7809a86773a4f27fe7ea9730b56 245 SUPERFAMILY SSF51366 2 242 3.63E-63 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL549_RS11135 61aec7809a86773a4f27fe7ea9730b56 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.2E-77 T 28-03-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AL549_RS09465 de01f0c2de3bf73eef77eeca0d63925c 429 PRINTS PR00143 Citrate synthase signature 241 269 2.7E-55 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL549_RS09465 de01f0c2de3bf73eef77eeca0d63925c 429 PRINTS PR00143 Citrate synthase signature 296 316 2.7E-55 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL549_RS09465 de01f0c2de3bf73eef77eeca0d63925c 429 PRINTS PR00143 Citrate synthase signature 379 393 2.7E-55 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL549_RS09465 de01f0c2de3bf73eef77eeca0d63925c 429 PRINTS PR00143 Citrate synthase signature 219 234 2.7E-55 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL549_RS09465 de01f0c2de3bf73eef77eeca0d63925c 429 PRINTS PR00143 Citrate synthase signature 359 375 2.7E-55 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL549_RS09465 de01f0c2de3bf73eef77eeca0d63925c 429 PRINTS PR00143 Citrate synthase signature 165 178 2.7E-55 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL549_RS09465 de01f0c2de3bf73eef77eeca0d63925c 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 1.9E-135 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL549_RS09465 de01f0c2de3bf73eef77eeca0d63925c 429 SUPERFAMILY SSF48256 4 428 5.89E-170 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AL549_RS09465 de01f0c2de3bf73eef77eeca0d63925c 429 PIRSF PIRSF001369 38 429 1.0E-174 T 28-03-2018 IPR024176 Citrate synthase, bacterial-type AL549_RS09465 de01f0c2de3bf73eef77eeca0d63925c 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 28-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AL549_RS09465 de01f0c2de3bf73eef77eeca0d63925c 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 3.6E-239 T 28-03-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AL549_RS09465 de01f0c2de3bf73eef77eeca0d63925c 429 Gene3D G3DSA:1.10.580.10 30 281 6.7E-90 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AL549_RS09465 de01f0c2de3bf73eef77eeca0d63925c 429 Gene3D G3DSA:1.10.230.10 282 379 7.3E-38 T 28-03-2018 IPR016143 Citrate synthase-like, small alpha subdomain AL549_RS09520 61da07b40dfb801e7920443d212873d7 291 Gene3D G3DSA:3.40.50.1980 172 289 3.1E-22 T 28-03-2018 AL549_RS09520 61da07b40dfb801e7920443d212873d7 291 Gene3D G3DSA:3.40.50.1980 16 171 2.9E-42 T 28-03-2018 AL549_RS09520 61da07b40dfb801e7920443d212873d7 291 PRINTS PR00690 Adhesin family signature 177 198 2.2E-7 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL549_RS09520 61da07b40dfb801e7920443d212873d7 291 PRINTS PR00690 Adhesin family signature 50 63 2.2E-7 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL549_RS09520 61da07b40dfb801e7920443d212873d7 291 PRINTS PR00690 Adhesin family signature 230 248 2.2E-7 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL549_RS09520 61da07b40dfb801e7920443d212873d7 291 PRINTS PR00690 Adhesin family signature 63 80 2.2E-7 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL549_RS09520 61da07b40dfb801e7920443d212873d7 291 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 277 4.5E-55 T 28-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AL549_RS09520 61da07b40dfb801e7920443d212873d7 291 SUPERFAMILY SSF53807 20 288 7.85E-74 T 28-03-2018 AL549_RS16045 8a182cf7db45426b400599951f5a8a36 453 Pfam PF03313 Serine dehydratase alpha chain 183 448 3.1E-98 T 28-03-2018 IPR005130 Serine dehydratase-like, alpha subunit AL549_RS16045 8a182cf7db45426b400599951f5a8a36 453 Gene3D G3DSA:1.10.4100.10 258 444 4.6E-37 T 28-03-2018 AL549_RS16045 8a182cf7db45426b400599951f5a8a36 453 SUPERFAMILY SSF143548 16 157 1.96E-44 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AL549_RS16045 8a182cf7db45426b400599951f5a8a36 453 Pfam PF03315 Serine dehydratase beta chain 3 155 2.4E-54 T 28-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL549_RS16045 8a182cf7db45426b400599951f5a8a36 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 5.1E-228 T 28-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL549_RS16045 8a182cf7db45426b400599951f5a8a36 453 Gene3D G3DSA:3.30.1330.90 10 158 3.1E-50 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AL549_RS10335 f67dc53443c6134e35583f79e95bc03c 159 SUPERFAMILY SSF55040 11 155 3.4E-61 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AL549_RS10335 f67dc53443c6134e35583f79e95bc03c 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 5.0E-72 T 28-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 AL549_RS10335 f67dc53443c6134e35583f79e95bc03c 159 Pfam PF01967 MoaC family 15 150 1.9E-55 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AL549_RS10335 f67dc53443c6134e35583f79e95bc03c 159 Gene3D G3DSA:3.30.70.640 2 158 1.0E-68 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AL549_RS10335 f67dc53443c6134e35583f79e95bc03c 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.017 T 28-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 AL549_RS20295 a5cbda310e39f5e8722bb1da7385bf97 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 6.7E-66 T 28-03-2018 IPR023798 Ribosomal protein S7 domain AL549_RS20295 a5cbda310e39f5e8722bb1da7385bf97 156 SUPERFAMILY SSF47973 6 149 4.97E-60 T 28-03-2018 IPR023798 Ribosomal protein S7 domain AL549_RS20295 a5cbda310e39f5e8722bb1da7385bf97 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.12 T 28-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AL549_RS20295 a5cbda310e39f5e8722bb1da7385bf97 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 28-03-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS20295 a5cbda310e39f5e8722bb1da7385bf97 156 PIRSF PIRSF002122 3 156 2.3E-63 T 28-03-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 AL549_RS20295 a5cbda310e39f5e8722bb1da7385bf97 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 9.5E-72 T 28-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AL549_RS20295 a5cbda310e39f5e8722bb1da7385bf97 156 Gene3D G3DSA:1.10.455.10 6 156 3.6E-63 T 28-03-2018 IPR023798 Ribosomal protein S7 domain AL549_RS14425 dbb6c7da70bb0f928d7c3e522b3a4382 42 Pfam PF11665 Protein of unknown function (DUF3265) 15 42 2.3E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS19225 49f923ddf3c55b8036e650123ecf8082 206 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 95 1.3E-34 T 28-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AL549_RS19225 49f923ddf3c55b8036e650123ecf8082 206 PIRSF PIRSF016938 1 194 3.8E-31 T 28-03-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 AL549_RS19225 49f923ddf3c55b8036e650123ecf8082 206 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 137 189 1.9E-20 T 28-03-2018 IPR005573 Anti sigma-E protein RseA, C-terminal AL549_RS19225 49f923ddf3c55b8036e650123ecf8082 206 SUPERFAMILY SSF89069 4 67 6.28E-21 T 28-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AL549_RS09880 c8fb525dba5fe45bc74f4a8cdf0e4a75 202 SMART SM01144 1 193 2.3E-68 T 28-03-2018 IPR005636 DTW AL549_RS09880 c8fb525dba5fe45bc74f4a8cdf0e4a75 202 Pfam PF03942 DTW domain 3 188 1.8E-50 T 28-03-2018 IPR005636 DTW AL549_RS15055 ea1242e38e888bad201fcccb25a2a837 145 Gene3D G3DSA:3.40.630.30 1 137 8.3E-19 T 28-03-2018 AL549_RS15055 ea1242e38e888bad201fcccb25a2a837 145 Pfam PF00583 Acetyltransferase (GNAT) family 35 129 1.8E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS15055 ea1242e38e888bad201fcccb25a2a837 145 SUPERFAMILY SSF55729 2 133 8.89E-22 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS16535 96e437a019e07c52394cdab40b3b7ea2 546 Pfam PF00732 GMC oxidoreductase 4 294 4.9E-90 T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL549_RS16535 96e437a019e07c52394cdab40b3b7ea2 546 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 253 267 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL549_RS16535 96e437a019e07c52394cdab40b3b7ea2 546 PIRSF PIRSF000137 1 540 9.3E-151 T 28-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL549_RS16535 96e437a019e07c52394cdab40b3b7ea2 546 Gene3D G3DSA:3.30.560.10 104 487 4.4E-102 T 28-03-2018 AL549_RS16535 96e437a019e07c52394cdab40b3b7ea2 546 Pfam PF05199 GMC oxidoreductase 387 524 2.8E-41 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AL549_RS16535 96e437a019e07c52394cdab40b3b7ea2 546 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL549_RS16535 96e437a019e07c52394cdab40b3b7ea2 546 Gene3D G3DSA:4.10.450.10 35 103 2.4E-28 T 28-03-2018 AL549_RS16535 96e437a019e07c52394cdab40b3b7ea2 546 SUPERFAMILY SSF54373 289 472 7.16E-47 T 28-03-2018 AL549_RS16535 96e437a019e07c52394cdab40b3b7ea2 546 SUPERFAMILY SSF51905 2 287 1.58E-92 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS16535 96e437a019e07c52394cdab40b3b7ea2 546 SUPERFAMILY SSF51905 471 532 1.58E-92 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS02140 3bea463b287d7716db651344e7c7da05 184 SUPERFAMILY SSF52218 2 184 1.01E-46 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS02140 3bea463b287d7716db651344e7c7da05 184 Pfam PF03358 NADPH-dependent FMN reductase 15 133 3.4E-13 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL549_RS02140 3bea463b287d7716db651344e7c7da05 184 Gene3D G3DSA:3.40.50.360 1 184 9.7E-39 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS10235 a019103f1cc28cba2110555267a6b3fc 209 SUPERFAMILY SSF52833 1 184 1.67E-36 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS10235 a019103f1cc28cba2110555267a6b3fc 209 Pfam PF13743 Thioredoxin 6 175 2.1E-21 T 28-03-2018 AL549_RS10235 a019103f1cc28cba2110555267a6b3fc 209 Gene3D G3DSA:3.40.30.10 1 207 5.7E-37 T 28-03-2018 AL549_RS05300 acaa9d376459ed5f9dc7cfd0b070d15d 440 SUPERFAMILY SSF53850 20 325 5.19E-21 T 28-03-2018 AL549_RS05300 acaa9d376459ed5f9dc7cfd0b070d15d 440 Pfam PF13379 NMT1-like family 14 294 5.5E-108 T 28-03-2018 AL549_RS05300 acaa9d376459ed5f9dc7cfd0b070d15d 440 Gene3D G3DSA:3.40.190.10 15 127 1.7E-9 T 28-03-2018 AL549_RS05300 acaa9d376459ed5f9dc7cfd0b070d15d 440 Gene3D G3DSA:3.40.190.10 142 374 1.2E-35 T 28-03-2018 AL549_RS05230 54a3adb545b6169351c2a5b8000854b9 461 Gene3D G3DSA:3.30.2290.10 5 217 2.3E-38 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain AL549_RS05230 54a3adb545b6169351c2a5b8000854b9 461 SUPERFAMILY SSF111283 7 459 3.79E-111 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL549_RS05230 54a3adb545b6169351c2a5b8000854b9 461 Pfam PF01523 Putative modulator of DNA gyrase 21 314 3.7E-61 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL549_RS05230 54a3adb545b6169351c2a5b8000854b9 461 PIRSF PIRSF004919 1 461 9.3E-116 T 28-03-2018 IPR025502 TldD AL549_RS13345 904f924a5090b0e0e3147e0c75680771 53 Pfam PF11665 Protein of unknown function (DUF3265) 12 39 1.7E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS20665 671377a1716a3ac35bbcc1ae70cf207c 252 SUPERFAMILY SSF46548 107 226 1.74E-30 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL549_RS20665 671377a1716a3ac35bbcc1ae70cf207c 252 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL549_RS20665 671377a1716a3ac35bbcc1ae70cf207c 252 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 8.3E-94 T 28-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS20665 671377a1716a3ac35bbcc1ae70cf207c 252 SUPERFAMILY SSF54292 5 106 1.84E-29 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL549_RS20665 671377a1716a3ac35bbcc1ae70cf207c 252 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 2.6E-33 T 28-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS20665 671377a1716a3ac35bbcc1ae70cf207c 252 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS20665 671377a1716a3ac35bbcc1ae70cf207c 252 Gene3D G3DSA:3.10.20.30 1 105 9.7E-30 T 28-03-2018 IPR012675 Beta-grasp domain AL549_RS20665 671377a1716a3ac35bbcc1ae70cf207c 252 Pfam PF13183 4Fe-4S dicluster domain 147 219 6.4E-11 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS20665 671377a1716a3ac35bbcc1ae70cf207c 252 Gene3D G3DSA:1.10.1060.10 107 241 2.7E-25 T 28-03-2018 AL549_RS13040 0842289f852c9e0049e7c80763fab28d 42 Pfam PF11665 Protein of unknown function (DUF3265) 10 36 7.9E-8 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS00795 a25c19db04cc5f5eb922803730f13141 179 Gene3D G3DSA:3.40.50.850 1 179 3.7E-36 T 28-03-2018 AL549_RS00795 a25c19db04cc5f5eb922803730f13141 179 SUPERFAMILY SSF52499 1 179 3.66E-45 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL549_RS00795 a25c19db04cc5f5eb922803730f13141 179 Pfam PF00857 Isochorismatase family 7 149 1.2E-28 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL549_RS11695 ead6cfe02db8cdb42b2dd3eb44cdc754 342 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 342 36.515 T 28-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL549_RS11695 ead6cfe02db8cdb42b2dd3eb44cdc754 342 Pfam PF02277 Phosphoribosyltransferase 2 340 5.9E-128 T 28-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL549_RS11695 ead6cfe02db8cdb42b2dd3eb44cdc754 342 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 340 2.1E-128 T 28-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL549_RS11695 ead6cfe02db8cdb42b2dd3eb44cdc754 342 Gene3D G3DSA:3.40.50.10210 66 323 4.3E-100 T 28-03-2018 AL549_RS11695 ead6cfe02db8cdb42b2dd3eb44cdc754 342 SUPERFAMILY SSF52733 3 341 1.18E-114 T 28-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL549_RS11695 ead6cfe02db8cdb42b2dd3eb44cdc754 342 Gene3D G3DSA:1.10.1610.10 1 65 1.2E-26 T 28-03-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL549_RS17050 a697326fa0bf158b3b1c2a67db913252 478 Gene3D G3DSA:1.10.443.10 226 458 1.1E-22 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL549_RS17050 a697326fa0bf158b3b1c2a67db913252 478 SUPERFAMILY SSF56349 229 450 1.47E-19 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL549_RS17050 a697326fa0bf158b3b1c2a67db913252 478 Pfam PF00589 Phage integrase family 238 438 5.6E-15 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL549_RS01100 05ec5b69e85e6b1f32fd446ad741e2f9 826 SUPERFAMILY SSF49303 756 819 8.78E-7 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AL549_RS01100 05ec5b69e85e6b1f32fd446ad741e2f9 826 Gene3D G3DSA:2.60.40.10 202 288 7.4E-14 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS01100 05ec5b69e85e6b1f32fd446ad741e2f9 826 Gene3D G3DSA:2.60.120.260 7 201 8.1E-31 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS01100 05ec5b69e85e6b1f32fd446ad741e2f9 826 Gene3D G3DSA:2.60.40.10 654 749 5.2E-6 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS01100 05ec5b69e85e6b1f32fd446ad741e2f9 826 SUPERFAMILY SSF51445 295 643 6.74E-106 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS01100 05ec5b69e85e6b1f32fd446ad741e2f9 826 Gene3D G3DSA:3.20.20.80 297 641 2.2E-84 T 28-03-2018 AL549_RS01100 05ec5b69e85e6b1f32fd446ad741e2f9 826 SUPERFAMILY SSF49785 16 203 7.99E-46 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS01100 05ec5b69e85e6b1f32fd446ad741e2f9 826 SUPERFAMILY SSF49303 207 288 5.47E-15 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AL549_RS01100 05ec5b69e85e6b1f32fd446ad741e2f9 826 Pfam PF00703 Glycosyl hydrolases family 2 209 286 3.1E-6 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AL549_RS01100 05ec5b69e85e6b1f32fd446ad741e2f9 826 SUPERFAMILY SSF49303 659 745 2.37E-5 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AL549_RS01100 05ec5b69e85e6b1f32fd446ad741e2f9 826 Gene3D G3DSA:2.60.40.10 750 826 1.1E-10 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS00065 37d7aa32177cd851f214fd0f017c18b3 302 Pfam PF00892 EamA-like transporter family 3 135 2.4E-20 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS00065 37d7aa32177cd851f214fd0f017c18b3 302 Pfam PF00892 EamA-like transporter family 151 280 2.6E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS00065 37d7aa32177cd851f214fd0f017c18b3 302 SUPERFAMILY SSF103481 41 137 3.4E-12 T 28-03-2018 AL549_RS00065 37d7aa32177cd851f214fd0f017c18b3 302 SUPERFAMILY SSF103481 188 287 6.02E-13 T 28-03-2018 AL549_RS15770 db8e42106e2d88154ae91d620efa1552 179 Gene3D G3DSA:3.40.630.30 1 175 1.4E-20 T 28-03-2018 AL549_RS15770 db8e42106e2d88154ae91d620efa1552 179 SUPERFAMILY SSF55729 3 158 1.45E-25 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS15770 db8e42106e2d88154ae91d620efa1552 179 Pfam PF13302 Acetyltransferase (GNAT) domain 7 146 1.5E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS15760 b589b87e2efd62be3034d9acba84e54d 351 SMART SM00342 261 344 7.3E-15 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS15760 b589b87e2efd62be3034d9acba84e54d 351 Gene3D G3DSA:1.10.10.60 238 297 6.9E-4 T 28-03-2018 AL549_RS15760 b589b87e2efd62be3034d9acba84e54d 351 Pfam PF12833 Helix-turn-helix domain 267 345 6.9E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS15760 b589b87e2efd62be3034d9acba84e54d 351 SUPERFAMILY SSF46689 297 345 4.08E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS15760 b589b87e2efd62be3034d9acba84e54d 351 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 328 344 7.2E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS15760 b589b87e2efd62be3034d9acba84e54d 351 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 313 328 7.2E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS15760 b589b87e2efd62be3034d9acba84e54d 351 Gene3D G3DSA:1.10.10.60 298 348 2.8E-13 T 28-03-2018 AL549_RS08360 6653e1ff29481b6ff0e2e3225eaf4956 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 2.8E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS08360 6653e1ff29481b6ff0e2e3225eaf4956 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 71 82 2.8E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS08360 6653e1ff29481b6ff0e2e3225eaf4956 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 71 2.8E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS08360 6653e1ff29481b6ff0e2e3225eaf4956 328 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 37 94 1.6E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS08360 6653e1ff29481b6ff0e2e3225eaf4956 328 SUPERFAMILY SSF46785 37 141 1.07E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS08360 6653e1ff29481b6ff0e2e3225eaf4956 328 Pfam PF03466 LysR substrate binding domain 122 322 1.9E-24 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS08360 6653e1ff29481b6ff0e2e3225eaf4956 328 Gene3D G3DSA:3.40.190.10 123 203 1.4E-9 T 28-03-2018 AL549_RS08360 6653e1ff29481b6ff0e2e3225eaf4956 328 SUPERFAMILY SSF53850 123 327 1.23E-25 T 28-03-2018 AL549_RS08360 6653e1ff29481b6ff0e2e3225eaf4956 328 Gene3D G3DSA:3.40.190.10 204 301 9.2E-18 T 28-03-2018 AL549_RS08360 6653e1ff29481b6ff0e2e3225eaf4956 328 Gene3D G3DSA:1.10.10.10 31 120 2.0E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS07320 d3aa064123af04d065481ad0db13fc48 283 Gene3D G3DSA:3.40.50.1980 129 283 5.9E-31 T 28-03-2018 AL549_RS07320 d3aa064123af04d065481ad0db13fc48 283 Pfam PF01497 Periplasmic binding protein 29 257 3.7E-33 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL549_RS07320 d3aa064123af04d065481ad0db13fc48 283 Gene3D G3DSA:3.40.50.1980 26 128 1.9E-18 T 28-03-2018 AL549_RS07320 d3aa064123af04d065481ad0db13fc48 283 SUPERFAMILY SSF53807 27 281 4.71E-47 T 28-03-2018 AL549_RS14130 5bd3e1cfdd37e7572695a10d0aa530fa 201 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 25 184 3.1E-18 T 28-03-2018 IPR021255 Putative auto-transporter adhesin, head GIN domain AL549_RS13245 5bd3e1cfdd37e7572695a10d0aa530fa 201 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 25 184 3.1E-18 T 28-03-2018 IPR021255 Putative auto-transporter adhesin, head GIN domain AL549_RS18440 d5d2a042bce961253fdea37ddfb2c015 406 Gene3D G3DSA:3.40.720.10 269 406 5.3E-16 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS18440 d5d2a042bce961253fdea37ddfb2c015 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 3.2E-176 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL549_RS18440 d5d2a042bce961253fdea37ddfb2c015 406 Gene3D G3DSA:3.30.70.1250 117 234 1.9E-48 T 28-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL549_RS18440 d5d2a042bce961253fdea37ddfb2c015 406 SUPERFAMILY SSF53649 1 115 1.05E-68 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS18440 d5d2a042bce961253fdea37ddfb2c015 406 SUPERFAMILY SSF53649 236 406 1.05E-68 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS18440 d5d2a042bce961253fdea37ddfb2c015 406 Pfam PF01676 Metalloenzyme superfamily 2 397 5.6E-43 T 28-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AL549_RS18440 d5d2a042bce961253fdea37ddfb2c015 406 PIRSF PIRSF001491 1 406 2.3E-160 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL549_RS18440 d5d2a042bce961253fdea37ddfb2c015 406 SUPERFAMILY SSF143856 118 234 3.66E-47 T 28-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL549_RS18440 d5d2a042bce961253fdea37ddfb2c015 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 53.676 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL549_RS22065 5f61a5014d08ab0385adb50aeca69b72 461 SUPERFAMILY SSF49503 32 156 1.89E-38 T 28-03-2018 IPR008972 Cupredoxin AL549_RS22065 5f61a5014d08ab0385adb50aeca69b72 461 Pfam PF07732 Multicopper oxidase 46 157 8.6E-39 T 28-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AL549_RS22065 5f61a5014d08ab0385adb50aeca69b72 461 Gene3D G3DSA:2.60.40.420 155 291 5.4E-19 T 28-03-2018 IPR008972 Cupredoxin AL549_RS22065 5f61a5014d08ab0385adb50aeca69b72 461 SUPERFAMILY SSF49503 313 460 5.96E-34 T 28-03-2018 IPR008972 Cupredoxin AL549_RS22065 5f61a5014d08ab0385adb50aeca69b72 461 SUPERFAMILY SSF49503 160 281 2.28E-16 T 28-03-2018 IPR008972 Cupredoxin AL549_RS22065 5f61a5014d08ab0385adb50aeca69b72 461 ProSitePatterns PS00080 Multicopper oxidases signature 2. 443 454 - T 28-03-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AL549_RS22065 5f61a5014d08ab0385adb50aeca69b72 461 Gene3D G3DSA:2.60.40.420 312 461 7.0E-32 T 28-03-2018 IPR008972 Cupredoxin AL549_RS22065 5f61a5014d08ab0385adb50aeca69b72 461 Pfam PF07731 Multicopper oxidase 359 460 6.7E-26 T 28-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AL549_RS22065 5f61a5014d08ab0385adb50aeca69b72 461 Gene3D G3DSA:2.60.40.420 15 154 6.4E-35 T 28-03-2018 IPR008972 Cupredoxin AL549_RS22065 5f61a5014d08ab0385adb50aeca69b72 461 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 26 2.6E-5 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL549_RS22065 5f61a5014d08ab0385adb50aeca69b72 461 Pfam PF00394 Multicopper oxidase 172 284 1.3E-6 T 28-03-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AL549_RS11220 2583c7a597ce1ce5cc145b905f40e89f 59 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 9 57 7.9E-30 T 28-03-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE AL549_RS11220 2583c7a597ce1ce5cc145b905f40e89f 59 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 7.4E-26 T 28-03-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE AL549_RS05325 45d5e753e8cf6a3e8e358b0af14abd04 1040 Pfam PF02412 Thrombospondin type 3 repeat 278 310 0.034 T 28-03-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 AL549_RS05325 45d5e753e8cf6a3e8e358b0af14abd04 1040 Gene3D G3DSA:4.10.1080.10 356 930 1.0E-4 T 28-03-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AL549_RS05325 45d5e753e8cf6a3e8e358b0af14abd04 1040 Gene3D G3DSA:4.10.1080.10 35 345 1.0E-12 T 28-03-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AL549_RS05325 45d5e753e8cf6a3e8e358b0af14abd04 1040 SUPERFAMILY SSF103647 312 414 2.22E-13 T 28-03-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AL549_RS08995 df1b249fd4139a0ce1e96d6ff6152997 202 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 11 200 1.1E-39 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AL549_RS08995 df1b249fd4139a0ce1e96d6ff6152997 202 Pfam PF03550 Outer membrane lipoprotein LolB 42 199 1.2E-44 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AL549_RS08995 df1b249fd4139a0ce1e96d6ff6152997 202 SUPERFAMILY SSF89392 18 201 2.63E-49 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL549_RS08995 df1b249fd4139a0ce1e96d6ff6152997 202 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 2 201 27.233 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AL549_RS08995 df1b249fd4139a0ce1e96d6ff6152997 202 Gene3D G3DSA:2.50.20.10 22 202 1.8E-48 T 28-03-2018 AL549_RS12245 543089052fe2e9c1cf3054d57641db51 368 Pfam PF13439 Glycosyltransferase Family 4 20 177 8.9E-16 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL549_RS12245 543089052fe2e9c1cf3054d57641db51 368 SUPERFAMILY SSF53756 9 362 5.5E-70 T 28-03-2018 AL549_RS12245 543089052fe2e9c1cf3054d57641db51 368 Pfam PF00534 Glycosyl transferases group 1 187 332 4.0E-31 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL549_RS12245 543089052fe2e9c1cf3054d57641db51 368 Gene3D G3DSA:3.40.50.2000 187 346 3.1E-37 T 28-03-2018 AL549_RS12245 543089052fe2e9c1cf3054d57641db51 368 Gene3D G3DSA:3.40.50.2000 6 186 4.7E-16 T 28-03-2018 AL549_RS06355 4736327558eb4573caf55cc7b9223b06 459 Pfam PF00270 DEAD/DEAH box helicase 27 193 5.7E-45 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL549_RS06355 4736327558eb4573caf55cc7b9223b06 459 Pfam PF03880 DbpA RNA binding domain 385 455 1.1E-19 T 28-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AL549_RS06355 4736327558eb4573caf55cc7b9223b06 459 SUPERFAMILY SSF52540 72 358 2.59E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06355 4736327558eb4573caf55cc7b9223b06 459 SMART SM00490 256 337 2.3E-30 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS06355 4736327558eb4573caf55cc7b9223b06 459 Gene3D G3DSA:3.40.50.300 220 454 1.2E-42 T 28-03-2018 AL549_RS06355 4736327558eb4573caf55cc7b9223b06 459 Pfam PF00271 Helicase conserved C-terminal domain 230 337 2.0E-28 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS06355 4736327558eb4573caf55cc7b9223b06 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL549_RS06355 4736327558eb4573caf55cc7b9223b06 459 SMART SM00487 22 219 1.3E-57 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS06355 4736327558eb4573caf55cc7b9223b06 459 Gene3D G3DSA:3.40.50.300 9 219 3.6E-60 T 28-03-2018 AL549_RS16565 fa2967d886ea4bdacd91bb20d0c8b1f3 263 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 259 40.788 T 28-03-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 AL549_RS16565 fa2967d886ea4bdacd91bb20d0c8b1f3 263 Gene3D G3DSA:3.40.50.150 9 263 1.2E-38 T 28-03-2018 AL549_RS16565 fa2967d886ea4bdacd91bb20d0c8b1f3 263 Pfam PF13847 Methyltransferase domain 47 154 8.2E-12 T 28-03-2018 IPR025714 Methyltransferase domain AL549_RS16565 fa2967d886ea4bdacd91bb20d0c8b1f3 263 SUPERFAMILY SSF53335 6 251 3.1E-33 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS16520 da13b09da6b0f5f53f3e7b2ba6f13641 248 Pfam PF05618 Putative ATP-dependant zinc protease 108 243 2.1E-47 T 28-03-2018 AL549_RS16520 da13b09da6b0f5f53f3e7b2ba6f13641 248 Gene3D G3DSA:2.40.70.10 105 235 1.5E-45 T 28-03-2018 IPR021109 Aspartic peptidase domain AL549_RS16520 da13b09da6b0f5f53f3e7b2ba6f13641 248 SUPERFAMILY SSF50630 108 242 3.33E-42 T 28-03-2018 IPR021109 Aspartic peptidase domain AL549_RS23015 270adf8e42da4e630723d7403d6c2c39 374 Pfam PF13692 Glycosyl transferases group 1 244 335 1.8E-10 T 28-03-2018 AL549_RS23015 270adf8e42da4e630723d7403d6c2c39 374 SUPERFAMILY SSF53756 6 367 1.36E-30 T 28-03-2018 AL549_RS23015 270adf8e42da4e630723d7403d6c2c39 374 Gene3D G3DSA:3.40.50.2000 193 353 2.2E-17 T 28-03-2018 AL549_RS01535 0cf3c70350b8a37b5e216cb9e2d5f17d 259 Pfam PF00563 EAL domain 24 242 3.9E-48 T 28-03-2018 IPR001633 EAL domain AL549_RS01535 0cf3c70350b8a37b5e216cb9e2d5f17d 259 SUPERFAMILY SSF141868 25 242 7.32E-59 T 28-03-2018 IPR001633 EAL domain AL549_RS01535 0cf3c70350b8a37b5e216cb9e2d5f17d 259 Gene3D G3DSA:3.20.20.450 17 247 2.3E-54 T 28-03-2018 IPR001633 EAL domain AL549_RS01535 0cf3c70350b8a37b5e216cb9e2d5f17d 259 SMART SM00052 7 247 4.5E-18 T 28-03-2018 IPR001633 EAL domain AL549_RS16550 bd55603ff76f18d13dbc3ecc00c0bfc2 1487 PIRSF PIRSF005246 1 1487 0.0 T 28-03-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AL549_RS16550 bd55603ff76f18d13dbc3ecc00c0bfc2 1487 Gene3D G3DSA:1.20.140.50 616 882 2.0E-6 T 28-03-2018 AL549_RS16550 bd55603ff76f18d13dbc3ecc00c0bfc2 1487 Pfam PF16330 MukB hinge domain 646 811 1.5E-71 T 28-03-2018 IPR032520 MukB, hinge domain AL549_RS16550 bd55603ff76f18d13dbc3ecc00c0bfc2 1487 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 1.3E-14 T 28-03-2018 AL549_RS16550 bd55603ff76f18d13dbc3ecc00c0bfc2 1487 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1472 11.125 T 28-03-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AL549_RS16550 bd55603ff76f18d13dbc3ecc00c0bfc2 1487 SUPERFAMILY SSF52540 26 224 2.66E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16550 bd55603ff76f18d13dbc3ecc00c0bfc2 1487 Gene3D G3DSA:3.40.50.300 1155 1438 0.13 T 28-03-2018 AL549_RS16550 bd55603ff76f18d13dbc3ecc00c0bfc2 1487 Pfam PF04310 MukB N-terminal 2 227 1.8E-121 T 28-03-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AL549_RS16550 bd55603ff76f18d13dbc3ecc00c0bfc2 1487 Gene3D G3DSA:3.40.1140.10 1 227 2.3E-14 T 28-03-2018 AL549_RS16550 bd55603ff76f18d13dbc3ecc00c0bfc2 1487 Gene3D G3DSA:1.20.5.340 883 1031 4.2E-4 T 28-03-2018 AL549_RS09435 f2aae0872db122765cccf370cdc91741 222 Pfam PF13309 HTH domain 160 217 4.9E-13 T 28-03-2018 AL549_RS09435 f2aae0872db122765cccf370cdc91741 222 Pfam PF08348 YheO-like PAS domain 17 123 3.8E-36 T 28-03-2018 IPR013559 YheO-like AL549_RS09435 f2aae0872db122765cccf370cdc91741 222 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 13 135 1.0E-69 T 28-03-2018 IPR013559 YheO-like AL549_RS09435 f2aae0872db122765cccf370cdc91741 222 Gene3D G3DSA:1.10.10.60 173 222 4.4E-4 T 28-03-2018 AL549_RS05740 86d461d7ea59b82fbec54501ae552065 662 Pfam PF17152 Periplasmic sensor domain 44 140 1.6E-9 T 28-03-2018 IPR033417 Periplasmic sensor domain CHASE8 AL549_RS05740 86d461d7ea59b82fbec54501ae552065 662 Pfam PF13426 PAS domain 258 352 0.0024 T 28-03-2018 IPR000014 PAS domain AL549_RS05740 86d461d7ea59b82fbec54501ae552065 662 Gene3D G3DSA:3.30.450.20 232 358 2.1E-10 T 28-03-2018 AL549_RS05740 86d461d7ea59b82fbec54501ae552065 662 SUPERFAMILY SSF158472 181 227 1.44E-5 T 28-03-2018 AL549_RS05740 86d461d7ea59b82fbec54501ae552065 662 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 483 644 4.4E-46 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05740 86d461d7ea59b82fbec54501ae552065 662 SMART SM00091 246 311 2.1 T 28-03-2018 IPR000014 PAS domain AL549_RS05740 86d461d7ea59b82fbec54501ae552065 662 SMART SM00091 361 427 8.8E-11 T 28-03-2018 IPR000014 PAS domain AL549_RS05740 86d461d7ea59b82fbec54501ae552065 662 Gene3D G3DSA:3.30.70.270 499 660 2.3E-54 T 28-03-2018 AL549_RS05740 86d461d7ea59b82fbec54501ae552065 662 SUPERFAMILY SSF55073 492 646 1.41E-45 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS05740 86d461d7ea59b82fbec54501ae552065 662 Pfam PF00990 Diguanylate cyclase, GGDEF domain 487 642 2.5E-45 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05740 86d461d7ea59b82fbec54501ae552065 662 SMART SM00304 179 232 0.0085 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS05740 86d461d7ea59b82fbec54501ae552065 662 SUPERFAMILY SSF55785 349 451 4.94E-15 T 28-03-2018 IPR000014 PAS domain AL549_RS05740 86d461d7ea59b82fbec54501ae552065 662 SMART SM00267 476 647 1.4E-58 T 28-03-2018 IPR000160 GGDEF domain AL549_RS05740 86d461d7ea59b82fbec54501ae552065 662 Gene3D G3DSA:3.30.450.20 359 498 2.6E-19 T 28-03-2018 AL549_RS05740 86d461d7ea59b82fbec54501ae552065 662 Pfam PF00989 PAS fold 366 410 5.8E-8 T 28-03-2018 IPR013767 PAS fold GO:0006355 AL549_RS05740 86d461d7ea59b82fbec54501ae552065 662 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 366 482 1.3E-14 T 28-03-2018 IPR000014 PAS domain AL549_RS20310 2ed35b292dea6255287017adae85cb8e 118 SUPERFAMILY SSF75169 3 118 1.27E-37 T 28-03-2018 IPR027396 DsrEFH-like AL549_RS20310 2ed35b292dea6255287017adae85cb8e 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 1.5E-47 T 28-03-2018 IPR017462 Sulphur relay, TusC/DsrF AL549_RS20310 2ed35b292dea6255287017adae85cb8e 118 Pfam PF02635 DsrE/DsrF-like family 4 118 8.0E-27 T 28-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein AL549_RS20310 2ed35b292dea6255287017adae85cb8e 118 Gene3D G3DSA:3.40.1260.10 2 118 1.3E-23 T 28-03-2018 AL549_RS20340 265fddc020beda2bf12007cb5f440a65 313 Pfam PF01112 Asparaginase 7 308 1.2E-111 T 28-03-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 AL549_RS20340 265fddc020beda2bf12007cb5f440a65 313 SUPERFAMILY SSF56235 5 309 3.42E-98 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL549_RS20340 265fddc020beda2bf12007cb5f440a65 313 Gene3D G3DSA:3.60.20.30 178 313 6.7E-46 T 28-03-2018 AL549_RS05930 2f5f62cc94a5835764ad3a7ff0d383de 189 SMART SM00867 24 187 2.3E-59 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AL549_RS05930 2f5f62cc94a5835764ad3a7ff0d383de 189 SUPERFAMILY SSF101874 23 188 1.31E-48 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AL549_RS05930 2f5f62cc94a5835764ad3a7ff0d383de 189 Gene3D G3DSA:2.40.128.110 18 185 6.8E-44 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AL549_RS05930 2f5f62cc94a5835764ad3a7ff0d383de 189 Pfam PF04264 YceI-like domain 25 184 2.8E-34 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AL549_RS05930 2f5f62cc94a5835764ad3a7ff0d383de 189 Hamap MF_00780 Protein YceI [yceI]. 1 189 46.254 T 28-03-2018 IPR023480 Uncharacterised protein family UPF0312/YceI AL549_RS03940 6fd3eb7408402cff9cbeb1abff5ad79b 478 SUPERFAMILY SSF55347 288 451 9.35E-55 T 28-03-2018 AL549_RS03940 6fd3eb7408402cff9cbeb1abff5ad79b 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 1.5E-17 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS03940 6fd3eb7408402cff9cbeb1abff5ad79b 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 1.5E-17 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS03940 6fd3eb7408402cff9cbeb1abff5ad79b 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 1.5E-17 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS03940 6fd3eb7408402cff9cbeb1abff5ad79b 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 1.5E-17 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS03940 6fd3eb7408402cff9cbeb1abff5ad79b 478 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 28-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS03940 6fd3eb7408402cff9cbeb1abff5ad79b 478 SMART SM00846 127 288 2.6E-51 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS03940 6fd3eb7408402cff9cbeb1abff5ad79b 478 SUPERFAMILY SSF51735 128 304 7.01E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS03940 6fd3eb7408402cff9cbeb1abff5ad79b 478 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 4.9E-47 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS03940 6fd3eb7408402cff9cbeb1abff5ad79b 478 Gene3D G3DSA:3.40.50.720 126 295 1.5E-48 T 28-03-2018 AL549_RS03940 6fd3eb7408402cff9cbeb1abff5ad79b 478 Gene3D G3DSA:3.30.360.10 296 452 6.7E-51 T 28-03-2018 AL549_RS03940 6fd3eb7408402cff9cbeb1abff5ad79b 478 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 5.1E-113 T 28-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS03940 6fd3eb7408402cff9cbeb1abff5ad79b 478 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 1.2E-21 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS02265 cf82207ae4e4880f85a4e747b4cbcd8f 386 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 192 379 1.5E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS02265 cf82207ae4e4880f85a4e747b4cbcd8f 386 SUPERFAMILY SSF161098 169 362 1.57E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS02265 cf82207ae4e4880f85a4e747b4cbcd8f 386 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 78 1.5E-9 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL549_RS02265 cf82207ae4e4880f85a4e747b4cbcd8f 386 Gene3D G3DSA:1.10.3720.10 31 371 7.5E-42 T 28-03-2018 AL549_RS18160 0d605ab99e3ac6f77e7a90adc74ba27e 343 Gene3D G3DSA:2.160.10.10 172 340 2.2E-19 T 28-03-2018 AL549_RS18160 0d605ab99e3ac6f77e7a90adc74ba27e 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 1.7E-16 T 28-03-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 AL549_RS18160 0d605ab99e3ac6f77e7a90adc74ba27e 343 Gene3D G3DSA:3.30.60.70 131 171 2.6E-16 T 28-03-2018 AL549_RS18160 0d605ab99e3ac6f77e7a90adc74ba27e 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 4.8E-13 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS18160 0d605ab99e3ac6f77e7a90adc74ba27e 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 46.21 T 28-03-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 AL549_RS18160 0d605ab99e3ac6f77e7a90adc74ba27e 343 SUPERFAMILY SSF51161 90 323 3.88E-35 T 28-03-2018 IPR011004 Trimeric LpxA-like AL549_RS18160 0d605ab99e3ac6f77e7a90adc74ba27e 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 4.2E-180 T 28-03-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 AL549_RS03515 40c68d754f998ef6d09fbb90fe00d822 473 PIRSF PIRSF001386 3 472 9.1E-206 T 28-03-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 AL549_RS03515 40c68d754f998ef6d09fbb90fe00d822 473 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 260 278 - T 28-03-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 AL549_RS03515 40c68d754f998ef6d09fbb90fe00d822 473 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 5 471 7.0E-301 T 28-03-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 AL549_RS03515 40c68d754f998ef6d09fbb90fe00d822 473 SUPERFAMILY SSF53383 6 471 3.33E-124 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS03515 40c68d754f998ef6d09fbb90fe00d822 473 Gene3D G3DSA:3.90.1150.10 20 112 6.3E-25 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS03515 40c68d754f998ef6d09fbb90fe00d822 473 Gene3D G3DSA:3.90.1150.10 289 469 3.2E-67 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS03515 40c68d754f998ef6d09fbb90fe00d822 473 Hamap MF_00544 Tryptophanase [tnaA]. 4 471 96.835 T 28-03-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 AL549_RS03515 40c68d754f998ef6d09fbb90fe00d822 473 Pfam PF01212 Beta-eliminating lyase 49 437 1.5E-87 T 28-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AL549_RS20115 09abb848a7845d23630c84e0e55aab48 335 Gene3D G3DSA:3.30.420.40 176 291 2.1E-4 T 28-03-2018 AL549_RS20115 09abb848a7845d23630c84e0e55aab48 335 PIRSF PIRSF019169 1 327 5.2E-89 T 28-03-2018 IPR005883 Type IV pilus assembly protein PilM AL549_RS20115 09abb848a7845d23630c84e0e55aab48 335 SUPERFAMILY SSF53067 46 165 7.12E-7 T 28-03-2018 AL549_RS20115 09abb848a7845d23630c84e0e55aab48 335 Pfam PF11104 Type IV pilus assembly protein PilM; 8 323 1.8E-48 T 28-03-2018 IPR005883 Type IV pilus assembly protein PilM AL549_RS20115 09abb848a7845d23630c84e0e55aab48 335 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 5 325 1.9E-70 T 28-03-2018 IPR005883 Type IV pilus assembly protein PilM AL549_RS20115 09abb848a7845d23630c84e0e55aab48 335 Gene3D G3DSA:3.30.420.40 1 164 7.4E-23 T 28-03-2018 AL549_RS04795 1133bb89699697bf10ee29836444e28d 305 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 240 249 - T 28-03-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111 AL549_RS04795 1133bb89699697bf10ee29836444e28d 305 Gene3D G3DSA:3.20.20.70 10 304 1.2E-100 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS04795 1133bb89699697bf10ee29836444e28d 305 Pfam PF00682 HMGL-like 15 283 3.2E-51 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL549_RS04795 1133bb89699697bf10ee29836444e28d 305 SUPERFAMILY SSF51569 8 297 1.57E-70 T 28-03-2018 AL549_RS19750 7ccd05c382c95ed438f1ed12e6df2556 489 Pfam PF10150 Ribonuclease E/G family 124 393 2.6E-104 T 28-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AL549_RS19750 7ccd05c382c95ed438f1ed12e6df2556 489 SUPERFAMILY SSF50249 39 128 1.35E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS19750 7ccd05c382c95ed438f1ed12e6df2556 489 Pfam PF00575 S1 RNA binding domain 38 109 5.7E-6 T 28-03-2018 IPR003029 S1 domain GO:0003676 AL549_RS19750 7ccd05c382c95ed438f1ed12e6df2556 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 2.4E-173 T 28-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AL549_RS19750 7ccd05c382c95ed438f1ed12e6df2556 489 SMART SM00316 37 122 5.8E-10 T 28-03-2018 IPR022967 RNA-binding domain, S1 AL549_RS19750 7ccd05c382c95ed438f1ed12e6df2556 489 Gene3D G3DSA:2.40.50.140 32 127 8.1E-31 T 28-03-2018 AL549_RS06285 1d3e7453a4be53ea3bd6b9c878ae0d02 289 Pfam PF03466 LysR substrate binding domain 119 279 1.7E-13 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS06285 1d3e7453a4be53ea3bd6b9c878ae0d02 289 Gene3D G3DSA:3.40.190.10 151 250 1.3E-9 T 28-03-2018 AL549_RS06285 1d3e7453a4be53ea3bd6b9c878ae0d02 289 Gene3D G3DSA:1.10.10.10 1 86 1.0E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS06285 1d3e7453a4be53ea3bd6b9c878ae0d02 289 SUPERFAMILY SSF53850 88 276 4.16E-26 T 28-03-2018 AL549_RS06285 1d3e7453a4be53ea3bd6b9c878ae0d02 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS06285 1d3e7453a4be53ea3bd6b9c878ae0d02 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS06285 1d3e7453a4be53ea3bd6b9c878ae0d02 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS06285 1d3e7453a4be53ea3bd6b9c878ae0d02 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 6.4E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS06285 1d3e7453a4be53ea3bd6b9c878ae0d02 289 SUPERFAMILY SSF46785 3 84 1.69E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS17470 aa4b5ec6397351feba78795c5a1a7352 266 PRINTS PR01003 Flagellar assembly protein FliH signature 112 130 2.1E-5 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL549_RS17470 aa4b5ec6397351feba78795c5a1a7352 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 2.1E-5 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL549_RS17470 aa4b5ec6397351feba78795c5a1a7352 266 PRINTS PR01003 Flagellar assembly protein FliH signature 89 111 2.1E-5 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL549_RS17470 aa4b5ec6397351feba78795c5a1a7352 266 Pfam PF02108 Flagellar assembly protein FliH 125 252 1.6E-33 T 28-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AL549_RS09670 b2f2da00a407bf4d7cb262176c7c3404 154 Gene3D G3DSA:3.10.129.10 3 146 8.1E-23 T 28-03-2018 AL549_RS09670 b2f2da00a407bf4d7cb262176c7c3404 154 SUPERFAMILY SSF54637 4 143 2.05E-29 T 28-03-2018 IPR029069 HotDog domain AL549_RS09670 b2f2da00a407bf4d7cb262176c7c3404 154 PIRSF PIRSF020565 1 154 5.7E-68 T 28-03-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted AL549_RS13590 e91a0e13eaff478abd845352a34a0d1a 49 Pfam PF11665 Protein of unknown function (DUF3265) 10 36 4.6E-8 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS05320 833772b8ad51753b3aaf2d7589b806a5 107 SUPERFAMILY SSF50022 1 105 9.42E-34 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL549_RS05320 833772b8ad51753b3aaf2d7589b806a5 107 Gene3D G3DSA:2.102.10.10 1 106 1.1E-17 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL549_RS05320 833772b8ad51753b3aaf2d7589b806a5 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 106 2.1E-40 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AL549_RS05320 833772b8ad51753b3aaf2d7589b806a5 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 7 105 1.3E-32 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AL549_RS02050 44e0bb4947feecb8c0a25879effeeff7 159 Pfam PF07308 Protein of unknown function (DUF1456) 85 151 2.4E-22 T 28-03-2018 IPR009921 Domain of unknown function DUF1456 AL549_RS02050 44e0bb4947feecb8c0a25879effeeff7 159 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 2.1E-21 T 28-03-2018 IPR009921 Domain of unknown function DUF1456 AL549_RS01565 ca8a6990e9965569993306054daea85f 212 SUPERFAMILY SSF53182 1 211 2.09E-72 T 28-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AL549_RS01565 ca8a6990e9965569993306054daea85f 212 Pfam PF01470 Pyroglutamyl peptidase 3 199 7.0E-75 T 28-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AL549_RS01565 ca8a6990e9965569993306054daea85f 212 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 28-03-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site AL549_RS01565 ca8a6990e9965569993306054daea85f 212 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 198 38.545 T 28-03-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 AL549_RS01565 ca8a6990e9965569993306054daea85f 212 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 211 6.3E-81 T 28-03-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 AL549_RS01565 ca8a6990e9965569993306054daea85f 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 3.9E-44 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AL549_RS01565 ca8a6990e9965569993306054daea85f 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 3.9E-44 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AL549_RS01565 ca8a6990e9965569993306054daea85f 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 3.9E-44 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AL549_RS01565 ca8a6990e9965569993306054daea85f 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 3.9E-44 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AL549_RS01565 ca8a6990e9965569993306054daea85f 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 3.9E-44 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AL549_RS01565 ca8a6990e9965569993306054daea85f 212 PIRSF PIRSF015592 1 210 1.5E-85 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AL549_RS01565 ca8a6990e9965569993306054daea85f 212 Gene3D G3DSA:3.40.630.20 1 212 1.0E-61 T 28-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AL549_RS09170 69bd2c5ac171b38d9a55ce3ea7c13fa8 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 4.0E-32 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL549_RS09170 69bd2c5ac171b38d9a55ce3ea7c13fa8 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 226 8.4E-54 T 28-03-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 AL549_RS09170 69bd2c5ac171b38d9a55ce3ea7c13fa8 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 173 242 1.4E-22 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL549_RS09170 69bd2c5ac171b38d9a55ce3ea7c13fa8 249 SUPERFAMILY SSF117143 77 207 1.7E-15 T 28-03-2018 AL549_RS09170 69bd2c5ac171b38d9a55ce3ea7c13fa8 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.0E-5 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL549_RS16190 2c82ccaa618cc2ce91ebdb3ab40d91c3 202 Gene3D G3DSA:3.10.450.50 47 202 4.7E-14 T 28-03-2018 AL549_RS16190 2c82ccaa618cc2ce91ebdb3ab40d91c3 202 SUPERFAMILY SSF103642 182 201 2.62E-7 T 28-03-2018 AL549_RS16190 2c82ccaa618cc2ce91ebdb3ab40d91c3 202 Pfam PF02810 SEC-C motif 184 202 2.0E-10 T 28-03-2018 IPR004027 SEC-C motif AL549_RS16470 3c4da2650474ef0e07dbba3b1c46168e 378 PIRSF PIRSF000267 2 376 2.6E-121 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL549_RS16470 3c4da2650474ef0e07dbba3b1c46168e 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 3.8E-105 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL549_RS16470 3c4da2650474ef0e07dbba3b1c46168e 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 5.7E-168 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL549_RS17260 d7f11cca6785c2b3cb31de059e78a18d 154 Gene3D G3DSA:3.40.50.1240 1 151 2.3E-21 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AL549_RS17260 d7f11cca6785c2b3cb31de059e78a18d 154 SMART SM00855 2 116 4.7E-6 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL549_RS17260 d7f11cca6785c2b3cb31de059e78a18d 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 77 1.4E-8 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL549_RS17260 d7f11cca6785c2b3cb31de059e78a18d 154 SUPERFAMILY SSF53254 1 144 4.71E-22 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AL549_RS17260 d7f11cca6785c2b3cb31de059e78a18d 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 152 6.7E-34 T 28-03-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 AL549_RS17325 485be2fe06f01812fe948e807c06f13d 660 Pfam PF01578 Cytochrome C assembly protein 89 297 2.2E-54 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL549_RS17325 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 3.4E-95 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17325 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 3.4E-95 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17325 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 3.4E-95 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17325 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 3.4E-95 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17325 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 3.4E-95 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17325 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 3.4E-95 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17325 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 3.4E-95 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17325 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 3.4E-95 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17325 485be2fe06f01812fe948e807c06f13d 660 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 5.6E-126 T 28-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AL549_RS17325 485be2fe06f01812fe948e807c06f13d 660 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 3.1E-258 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17325 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 4.9E-63 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17325 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 4.9E-63 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17325 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 4.9E-63 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17325 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 4.9E-63 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17325 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 4.9E-63 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17325 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 4.9E-63 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS17325 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 4.9E-63 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS05375 d1e9541a07087b2530ed4389cc65d477 279 Pfam PF01739 CheR methyltransferase, SAM binding domain 77 269 2.4E-40 T 28-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AL549_RS05375 d1e9541a07087b2530ed4389cc65d477 279 Pfam PF03705 CheR methyltransferase, all-alpha domain 13 63 5.7E-10 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL549_RS05375 d1e9541a07087b2530ed4389cc65d477 279 SUPERFAMILY SSF53335 77 256 5.86E-45 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS05375 d1e9541a07087b2530ed4389cc65d477 279 SMART SM00138 11 274 4.2E-30 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS05375 d1e9541a07087b2530ed4389cc65d477 279 SUPERFAMILY SSF47757 8 72 9.02E-6 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL549_RS05375 d1e9541a07087b2530ed4389cc65d477 279 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 1.0E-28 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS05375 d1e9541a07087b2530ed4389cc65d477 279 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 1.0E-28 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS05375 d1e9541a07087b2530ed4389cc65d477 279 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 1.0E-28 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS05375 d1e9541a07087b2530ed4389cc65d477 279 PRINTS PR00996 Glutamate methyltransferase family signature 138 154 1.0E-28 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS05375 d1e9541a07087b2530ed4389cc65d477 279 PRINTS PR00996 Glutamate methyltransferase family signature 70 82 1.0E-28 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL549_RS05375 d1e9541a07087b2530ed4389cc65d477 279 Gene3D G3DSA:1.10.155.10 2 74 1.9E-4 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL549_RS05375 d1e9541a07087b2530ed4389cc65d477 279 Gene3D G3DSA:3.40.50.150 76 276 3.7E-38 T 28-03-2018 AL549_RS03425 ebf9def52df2bf625484107b49a68d5e 217 Gene3D G3DSA:1.20.1050.10 98 201 3.3E-16 T 28-03-2018 AL549_RS03425 ebf9def52df2bf625484107b49a68d5e 217 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 76 1.4E-8 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL549_RS03425 ebf9def52df2bf625484107b49a68d5e 217 SUPERFAMILY SSF47616 85 199 4.72E-12 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL549_RS03425 ebf9def52df2bf625484107b49a68d5e 217 Gene3D G3DSA:3.40.30.10 1 97 5.5E-16 T 28-03-2018 AL549_RS03425 ebf9def52df2bf625484107b49a68d5e 217 SUPERFAMILY SSF52833 3 86 8.47E-15 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS03895 7dc5e85013b2a2124d852eb62bb0a777 417 Pfam PF13520 Amino acid permease 9 405 8.3E-32 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL549_RS03895 7dc5e85013b2a2124d852eb62bb0a777 417 PIRSF PIRSF006060 1 415 1.2E-56 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL549_RS19145 ca1c2f5162d55b732a8acaa7b3d52020 269 SUPERFAMILY SSF101386 3 105 3.93E-24 T 28-03-2018 AL549_RS19145 ca1c2f5162d55b732a8acaa7b3d52020 269 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 2.0E-103 T 28-03-2018 IPR011551 NTP pyrophosphohydrolase MazG AL549_RS19145 ca1c2f5162d55b732a8acaa7b3d52020 269 Gene3D G3DSA:1.10.287.1080 2 126 1.1E-38 T 28-03-2018 AL549_RS19145 ca1c2f5162d55b732a8acaa7b3d52020 269 Gene3D G3DSA:1.10.287.1080 140 266 2.7E-27 T 28-03-2018 AL549_RS19145 ca1c2f5162d55b732a8acaa7b3d52020 269 SUPERFAMILY SSF101386 138 240 6.54E-24 T 28-03-2018 AL549_RS19145 ca1c2f5162d55b732a8acaa7b3d52020 269 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 233 1.8E-6 T 28-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AL549_RS19145 ca1c2f5162d55b732a8acaa7b3d52020 269 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 7.5E-27 T 28-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AL549_RS00310 21beae5ea59009b9f7080f2ece0676bf 489 Gene3D G3DSA:1.10.10.10 132 202 1.1E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS01545 7c1e3bec08287cb56d41e7f1e715c9b4 540 SMART SM00304 209 263 3.4E-16 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS01545 7c1e3bec08287cb56d41e7f1e715c9b4 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 505 6.2E-42 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS01545 7c1e3bec08287cb56d41e7f1e715c9b4 540 SMART SM00283 278 539 1.0E-83 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS01545 7c1e3bec08287cb56d41e7f1e715c9b4 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 453 482 2.1E-24 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS01545 7c1e3bec08287cb56d41e7f1e715c9b4 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 185 205 2.1E-24 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS01545 7c1e3bec08287cb56d41e7f1e715c9b4 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 2.1E-24 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS01545 7c1e3bec08287cb56d41e7f1e715c9b4 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 376 403 2.1E-24 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS01545 7c1e3bec08287cb56d41e7f1e715c9b4 540 Pfam PF00672 HAMP domain 209 259 2.6E-12 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS01545 7c1e3bec08287cb56d41e7f1e715c9b4 540 Gene3D G3DSA:1.10.287.950 314 540 7.3E-54 T 28-03-2018 AL549_RS01545 7c1e3bec08287cb56d41e7f1e715c9b4 540 Gene3D G3DSA:1.10.287.950 27 313 7.6E-6 T 28-03-2018 AL549_RS01545 7c1e3bec08287cb56d41e7f1e715c9b4 540 SUPERFAMILY SSF58104 231 540 1.31E-80 T 28-03-2018 AL549_RS23520 53d59845ae124d06114fea5df8cdea60 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 731 8.1E-213 T 28-03-2018 IPR011853 TRAP transporter, 4TM/12TM fusion protein AL549_RS23520 53d59845ae124d06114fea5df8cdea60 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 135 670 4.9E-78 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL549_RS23520 53d59845ae124d06114fea5df8cdea60 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 852 1.4E-68 T 28-03-2018 IPR021814 Protein of unknown function DUF3394 AL549_RS18705 1e3b0098971ff9f1eb1913edb2990131 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 306 7.5E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS18705 1e3b0098971ff9f1eb1913edb2990131 341 SUPERFAMILY SSF161098 96 287 1.1E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS18705 1e3b0098971ff9f1eb1913edb2990131 341 Gene3D G3DSA:1.10.3720.10 4 296 5.6E-41 T 28-03-2018 AL549_RS18560 42426f7d9dc5085028ebd5c3e2fb43b1 314 SUPERFAMILY SSF55120 9 247 2.82E-83 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS18560 42426f7d9dc5085028ebd5c3e2fb43b1 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 19.001 T 28-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS18560 42426f7d9dc5085028ebd5c3e2fb43b1 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 2.9E-20 T 28-03-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS18560 42426f7d9dc5085028ebd5c3e2fb43b1 314 SUPERFAMILY SSF88697 250 310 9.94E-15 T 28-03-2018 IPR015947 PUA-like domain AL549_RS18560 42426f7d9dc5085028ebd5c3e2fb43b1 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 2.4E-57 T 28-03-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AL549_RS18560 42426f7d9dc5085028ebd5c3e2fb43b1 314 Gene3D G3DSA:3.30.2350.10 9 226 2.0E-81 T 28-03-2018 AL549_RS18560 42426f7d9dc5085028ebd5c3e2fb43b1 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 5.7E-24 T 28-03-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 AL549_RS18560 42426f7d9dc5085028ebd5c3e2fb43b1 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 2.1E-88 T 28-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS18560 42426f7d9dc5085028ebd5c3e2fb43b1 314 Gene3D G3DSA:2.30.130.10 249 312 1.0E-16 T 28-03-2018 IPR002478 PUA domain GO:0003723 AL549_RS09585 ae2174517a78ab91bfc1104f9f113d49 184 PIRSF PIRSF004982 2 184 1.7E-60 T 28-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AL549_RS09585 ae2174517a78ab91bfc1104f9f113d49 184 Pfam PF03843 Outer membrane lipoprotein Slp family 17 163 1.2E-47 T 28-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AL549_RS09585 ae2174517a78ab91bfc1104f9f113d49 184 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 6 154 8.5E-39 T 28-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AL549_RS15710 ffb87178765483bb956a4a26032adaea 434 Pfam PF06629 MltA-interacting protein MipA 43 236 1.2E-20 T 28-03-2018 IPR010583 MltA-interacting MipA AL549_RS15710 ffb87178765483bb956a4a26032adaea 434 Gene3D G3DSA:2.40.160.20 23 238 0.0012 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS11830 d792f11bb52b319da80fe557a318c254 263 SUPERFAMILY SSF53850 37 244 1.58E-13 T 28-03-2018 AL549_RS11830 d792f11bb52b319da80fe557a318c254 263 Gene3D G3DSA:3.40.190.10 37 259 7.8E-9 T 28-03-2018 AL549_RS20285 6491a1343856e55db46db705efaef596 394 SUPERFAMILY SSF52540 6 219 3.86E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20285 6491a1343856e55db46db705efaef596 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 4.5E-33 T 28-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AL549_RS20285 6491a1343856e55db46db705efaef596 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 6.4E-14 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL549_RS20285 6491a1343856e55db46db705efaef596 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.3E-230 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL549_RS20285 6491a1343856e55db46db705efaef596 394 Gene3D G3DSA:2.40.30.10 206 299 7.2E-31 T 28-03-2018 AL549_RS20285 6491a1343856e55db46db705efaef596 394 Gene3D G3DSA:3.40.50.300 2 74 1.8E-11 T 28-03-2018 AL549_RS20285 6491a1343856e55db46db705efaef596 394 Gene3D G3DSA:3.40.50.300 75 203 1.7E-31 T 28-03-2018 AL549_RS20285 6491a1343856e55db46db705efaef596 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 7.0E-58 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS20285 6491a1343856e55db46db705efaef596 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.0E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS20285 6491a1343856e55db46db705efaef596 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.0E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS20285 6491a1343856e55db46db705efaef596 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.0E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS20285 6491a1343856e55db46db705efaef596 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.0E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS20285 6491a1343856e55db46db705efaef596 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.0E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS20285 6491a1343856e55db46db705efaef596 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 9.4E-17 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL549_RS20285 6491a1343856e55db46db705efaef596 394 SUPERFAMILY SSF50447 205 301 5.11E-30 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL549_RS20285 6491a1343856e55db46db705efaef596 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.346 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL549_RS20285 6491a1343856e55db46db705efaef596 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AL549_RS20285 6491a1343856e55db46db705efaef596 394 SUPERFAMILY SSF50465 298 393 3.17E-35 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL549_RS20285 6491a1343856e55db46db705efaef596 394 Gene3D G3DSA:2.40.30.10 300 393 3.1E-33 T 28-03-2018 AL549_RS19600 d2c79cb01752a55308b07d771ffa7faf 440 Gene3D G3DSA:3.90.110.10 161 435 3.2E-90 T 28-03-2018 AL549_RS19600 d2c79cb01752a55308b07d771ffa7faf 440 Gene3D G3DSA:3.40.50.720 3 160 4.9E-28 T 28-03-2018 AL549_RS19600 d2c79cb01752a55308b07d771ffa7faf 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 2.2E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL549_RS19600 d2c79cb01752a55308b07d771ffa7faf 440 SUPERFAMILY SSF51735 5 170 1.23E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS19600 d2c79cb01752a55308b07d771ffa7faf 440 SUPERFAMILY SSF56327 173 436 1.12E-91 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL549_RS19600 d2c79cb01752a55308b07d771ffa7faf 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 4.4E-48 T 28-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AL549_RS19600 d2c79cb01752a55308b07d771ffa7faf 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 3.7E-47 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL549_RS19600 d2c79cb01752a55308b07d771ffa7faf 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 3.7E-47 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL549_RS19600 d2c79cb01752a55308b07d771ffa7faf 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 3.7E-47 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL549_RS19600 d2c79cb01752a55308b07d771ffa7faf 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 3.7E-47 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL549_RS19600 d2c79cb01752a55308b07d771ffa7faf 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 3.7E-47 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL549_RS19600 d2c79cb01752a55308b07d771ffa7faf 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 3.7E-47 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL549_RS19600 d2c79cb01752a55308b07d771ffa7faf 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 3.7E-47 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL549_RS19085 90700fd652ebc1be278b85a43048acc8 167 Pfam PF02464 Competence-damaged protein 6 158 4.4E-57 T 28-03-2018 IPR008136 CinA, C-terminal AL549_RS19085 90700fd652ebc1be278b85a43048acc8 167 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 11 156 1.7E-48 T 28-03-2018 IPR008136 CinA, C-terminal AL549_RS19085 90700fd652ebc1be278b85a43048acc8 167 Gene3D G3DSA:3.90.950.20 1 164 2.0E-55 T 28-03-2018 AL549_RS19085 90700fd652ebc1be278b85a43048acc8 167 SUPERFAMILY SSF142433 3 160 6.54E-56 T 28-03-2018 IPR008136 CinA, C-terminal AL549_RS11780 b062a6dfb1a8c9d7c2376310d8f97eef 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-139 T 28-03-2018 AL549_RS11780 b062a6dfb1a8c9d7c2376310d8f97eef 313 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 54.244 T 28-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AL549_RS11780 b062a6dfb1a8c9d7c2376310d8f97eef 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 1.6E-162 T 28-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AL549_RS11780 b062a6dfb1a8c9d7c2376310d8f97eef 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.1E-136 T 28-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AL549_RS11780 b062a6dfb1a8c9d7c2376310d8f97eef 313 PIRSF PIRSF000450 1 309 2.2E-148 T 28-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AL549_RS11780 b062a6dfb1a8c9d7c2376310d8f97eef 313 Gene3D G3DSA:3.40.50.880 34 301 6.8E-47 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS11780 b062a6dfb1a8c9d7c2376310d8f97eef 313 SUPERFAMILY SSF52317 18 297 1.86E-103 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS20915 9673fe3c17746755f97c9f6a5cbd6ab0 197 Pfam PF03167 Uracil DNA glycosylase superfamily 31 179 1.2E-24 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL549_RS20915 9673fe3c17746755f97c9f6a5cbd6ab0 197 SMART SM00986 27 183 1.5E-31 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL549_RS20915 9673fe3c17746755f97c9f6a5cbd6ab0 197 SMART SM00987 27 183 1.5E-31 T 28-03-2018 AL549_RS20915 9673fe3c17746755f97c9f6a5cbd6ab0 197 Gene3D G3DSA:3.40.470.10 1 193 1.4E-47 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL549_RS20915 9673fe3c17746755f97c9f6a5cbd6ab0 197 SUPERFAMILY SSF52141 3 190 1.21E-55 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL549_RS19260 1ce75f08fdda6c370aef818311248dcc 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 3.7E-29 T 28-03-2018 IPR009491 Protein of unknown function DUF1107 AL549_RS19260 1ce75f08fdda6c370aef818311248dcc 68 Gene3D G3DSA:3.30.1910.10 1 62 5.0E-30 T 28-03-2018 AL549_RS19260 1ce75f08fdda6c370aef818311248dcc 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 8.0E-31 T 28-03-2018 IPR009491 Protein of unknown function DUF1107 AL549_RS19405 55d996f6c1e9a61c06469f4b3a7db552 236 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AL549_RS19405 55d996f6c1e9a61c06469f4b3a7db552 236 Pfam PF01168 Alanine racemase, N-terminal domain 24 230 2.5E-31 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL549_RS19405 55d996f6c1e9a61c06469f4b3a7db552 236 SUPERFAMILY SSF51419 1 228 1.96E-81 T 28-03-2018 IPR029066 PLP-binding barrel AL549_RS19405 55d996f6c1e9a61c06469f4b3a7db552 236 Gene3D G3DSA:3.20.20.10 1 236 1.5E-69 T 28-03-2018 IPR029066 PLP-binding barrel AL549_RS19405 55d996f6c1e9a61c06469f4b3a7db552 236 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 1.0E-87 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AL549_RS19405 55d996f6c1e9a61c06469f4b3a7db552 236 PIRSF PIRSF004848 1 236 7.5E-77 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AL549_RS06755 9bed4dc25127ee72869466ddb3b95353 116 Pfam PF04266 ASCH domain 19 105 1.4E-15 T 28-03-2018 IPR007374 ASCH domain AL549_RS06755 9bed4dc25127ee72869466ddb3b95353 116 SMART SM01022 19 115 2.7E-26 T 28-03-2018 IPR007374 ASCH domain AL549_RS06755 9bed4dc25127ee72869466ddb3b95353 116 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 15 116 32.778 T 28-03-2018 IPR008314 Uncharacterised conserved protein UCP029143 AL549_RS06755 9bed4dc25127ee72869466ddb3b95353 116 SUPERFAMILY SSF88697 16 116 2.49E-35 T 28-03-2018 IPR015947 PUA-like domain AL549_RS06755 9bed4dc25127ee72869466ddb3b95353 116 Gene3D G3DSA:2.30.130.30 14 116 6.8E-19 T 28-03-2018 AL549_RS06755 9bed4dc25127ee72869466ddb3b95353 116 PIRSF PIRSF029143 14 116 5.3E-50 T 28-03-2018 IPR008314 Uncharacterised conserved protein UCP029143 AL549_RS22825 daaa5d6c3a189c6ddd3f65ad2fc5bb15 212 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 170 198 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL549_RS22825 daaa5d6c3a189c6ddd3f65ad2fc5bb15 212 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 7 207 1.2E-55 T 28-03-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like AL549_RS22825 daaa5d6c3a189c6ddd3f65ad2fc5bb15 212 Gene3D G3DSA:2.160.10.10 87 211 6.1E-24 T 28-03-2018 AL549_RS22825 daaa5d6c3a189c6ddd3f65ad2fc5bb15 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 159 1.8E-5 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS22825 daaa5d6c3a189c6ddd3f65ad2fc5bb15 212 SUPERFAMILY SSF51161 3 205 1.52E-35 T 28-03-2018 IPR011004 Trimeric LpxA-like AL549_RS22825 daaa5d6c3a189c6ddd3f65ad2fc5bb15 212 Gene3D G3DSA:3.40.50.20 5 86 5.6E-9 T 28-03-2018 AL549_RS09285 6a679feee7554cb8294c2568b72c3eb7 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL549_RS09285 6a679feee7554cb8294c2568b72c3eb7 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.9E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS09285 6a679feee7554cb8294c2568b72c3eb7 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 8.9E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS09285 6a679feee7554cb8294c2568b72c3eb7 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 8.9E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS09285 6a679feee7554cb8294c2568b72c3eb7 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 8.9E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS09285 6a679feee7554cb8294c2568b72c3eb7 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 8.9E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS09285 6a679feee7554cb8294c2568b72c3eb7 275 Pfam PF00106 short chain dehydrogenase 3 185 1.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS09285 6a679feee7554cb8294c2568b72c3eb7 275 Gene3D G3DSA:3.40.50.720 2 266 1.9E-49 T 28-03-2018 AL549_RS09285 6a679feee7554cb8294c2568b72c3eb7 275 SUPERFAMILY SSF51735 2 270 3.4E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS21275 814e6511700629e9002822559cf349f5 332 Pfam PF12146 Serine aminopeptidase, S33 53 310 4.1E-58 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 AL549_RS21275 814e6511700629e9002822559cf349f5 332 SUPERFAMILY SSF53474 35 324 3.98E-44 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS21275 814e6511700629e9002822559cf349f5 332 Gene3D G3DSA:3.40.50.1820 29 331 2.9E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS18185 a1cc516382a32ec256ad254c2df0d69c 309 SUPERFAMILY SSF144083 246 306 2.75E-12 T 28-03-2018 AL549_RS18185 a1cc516382a32ec256ad254c2df0d69c 309 SUPERFAMILY SSF143865 26 235 1.57E-29 T 28-03-2018 AL549_RS18185 a1cc516382a32ec256ad254c2df0d69c 309 Gene3D G3DSA:1.20.58.340 127 241 2.0E-6 T 28-03-2018 AL549_RS18185 a1cc516382a32ec256ad254c2df0d69c 309 Gene3D G3DSA:1.20.58.340 242 309 5.1E-13 T 28-03-2018 AL549_RS18185 a1cc516382a32ec256ad254c2df0d69c 309 Pfam PF01544 CorA-like Mg2+ transporter protein 28 304 6.5E-42 T 28-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AL549_RS18185 a1cc516382a32ec256ad254c2df0d69c 309 Gene3D G3DSA:3.30.460.20 10 126 4.3E-12 T 28-03-2018 AL549_RS15560 02531546c89742f535904ecc001789c4 136 Gene3D G3DSA:3.40.190.10 18 134 1.4E-10 T 28-03-2018 AL549_RS15560 02531546c89742f535904ecc001789c4 136 SUPERFAMILY SSF53850 17 133 3.8E-13 T 28-03-2018 AL549_RS12090 04b906a94b2244836eb6edb38c0b77b4 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 5.6E-22 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL549_RS12090 04b906a94b2244836eb6edb38c0b77b4 365 SUPERFAMILY SSF161098 155 346 1.57E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS12090 04b906a94b2244836eb6edb38c0b77b4 365 Gene3D G3DSA:1.10.3720.10 26 365 5.8E-41 T 28-03-2018 AL549_RS12090 04b906a94b2244836eb6edb38c0b77b4 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 357 7.1E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS12235 d61852d8cc86328f029696fe10437e18 213 Pfam PF02397 Bacterial sugar transferase 15 208 1.2E-62 T 28-03-2018 IPR003362 Bacterial sugar transferase AL549_RS11390 2e35a6ac48ee0214dc1b646060565564 216 SUPERFAMILY SSF52540 10 199 5.9E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11390 2e35a6ac48ee0214dc1b646060565564 216 SMART SM00382 28 212 3.0E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS11390 2e35a6ac48ee0214dc1b646060565564 216 Pfam PF00005 ABC transporter 20 163 2.2E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS11390 2e35a6ac48ee0214dc1b646060565564 216 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS11390 2e35a6ac48ee0214dc1b646060565564 216 Gene3D G3DSA:3.40.50.300 2 207 2.4E-48 T 28-03-2018 AL549_RS21855 6833124989ef435fe251fbee0d93c1cb 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 38 136 1.6E-28 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL549_RS21855 6833124989ef435fe251fbee0d93c1cb 246 SUPERFAMILY SSF161098 41 227 3.66E-46 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS21855 6833124989ef435fe251fbee0d93c1cb 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 240 3.4E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS21855 6833124989ef435fe251fbee0d93c1cb 246 Gene3D G3DSA:1.10.3720.10 6 245 6.8E-48 T 28-03-2018 AL549_RS14565 6de1ad5f2fd8bbb3f20bbe2ed5b972d0 203 SUPERFAMILY SSF158668 35 147 1.52E-8 T 28-03-2018 AL549_RS14565 6de1ad5f2fd8bbb3f20bbe2ed5b972d0 203 Gene3D G3DSA:1.20.120.330 14 179 2.0E-24 T 28-03-2018 AL549_RS10060 e89b528eb1f9afe498114752fcd7124a 562 TIGRFAM TIGR04456 LruC_dom: LruC domain 315 551 4.3E-69 T 28-03-2018 IPR031025 LruC domain AL549_RS10060 e89b528eb1f9afe498114752fcd7124a 562 Pfam PF16130 Domain of unknown function (DUF4842) 348 550 8.1E-48 T 28-03-2018 IPR032295 Domain of unknown function DUF4842 AL549_RS03605 33453fdce72d34417148564ddb9f022c 271 Pfam PF08021 Siderophore-interacting FAD-binding domain 15 127 4.9E-32 T 28-03-2018 IPR013113 FAD-binding 9, siderophore-interacting AL549_RS03605 33453fdce72d34417148564ddb9f022c 271 Gene3D G3DSA:3.40.50.80 130 270 3.1E-36 T 28-03-2018 AL549_RS03605 33453fdce72d34417148564ddb9f022c 271 SUPERFAMILY SSF63380 14 128 8.04E-8 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL549_RS03605 33453fdce72d34417148564ddb9f022c 271 Pfam PF04954 Siderophore-interacting protein 134 253 2.0E-34 T 28-03-2018 IPR007037 Siderophore-interacting protein AL549_RS03605 33453fdce72d34417148564ddb9f022c 271 Gene3D G3DSA:2.40.30.10 5 127 2.5E-25 T 28-03-2018 AL549_RS21810 a3a04a1257f441e3f14f7c50bb29c63e 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 28-03-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21810 a3a04a1257f441e3f14f7c50bb29c63e 270 Pfam PF00119 ATP synthase A chain 44 262 5.9E-58 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21810 a3a04a1257f441e3f14f7c50bb29c63e 270 Gene3D G3DSA:1.20.120.220 92 268 4.5E-53 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21810 a3a04a1257f441e3f14f7c50bb29c63e 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.216 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21810 a3a04a1257f441e3f14f7c50bb29c63e 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 1.6E-13 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21810 a3a04a1257f441e3f14f7c50bb29c63e 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 1.6E-13 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21810 a3a04a1257f441e3f14f7c50bb29c63e 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 1.6E-13 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21810 a3a04a1257f441e3f14f7c50bb29c63e 270 SUPERFAMILY SSF81336 93 262 1.44E-49 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS21810 a3a04a1257f441e3f14f7c50bb29c63e 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 2.6E-45 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS12335 df2dc2af7e313a188c96f457ae174288 160 Gene3D G3DSA:3.30.70.990 10 94 8.2E-29 T 28-03-2018 IPR035570 UPF0234 N-terminal domain AL549_RS12335 df2dc2af7e313a188c96f457ae174288 160 SUPERFAMILY SSF89963 88 160 1.83E-28 T 28-03-2018 IPR007551 Protein of unknown function DUF520 AL549_RS12335 df2dc2af7e313a188c96f457ae174288 160 Gene3D G3DSA:3.30.70.860 95 159 7.7E-33 T 28-03-2018 IPR035571 UPF0234/UPF0381 domain AL549_RS12335 df2dc2af7e313a188c96f457ae174288 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 4.3E-63 T 28-03-2018 IPR007551 Protein of unknown function DUF520 AL549_RS12335 df2dc2af7e313a188c96f457ae174288 160 SUPERFAMILY SSF89963 2 85 1.44E-29 T 28-03-2018 IPR007551 Protein of unknown function DUF520 AL549_RS12335 df2dc2af7e313a188c96f457ae174288 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.225 T 28-03-2018 IPR007551 Protein of unknown function DUF520 AL549_RS02695 9bfe9a1bebd2c9a3058fa204c07341e1 665 Gene3D G3DSA:1.10.3470.10 347 665 1.4E-42 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL549_RS02695 9bfe9a1bebd2c9a3058fa204c07341e1 665 SUPERFAMILY SSF81345 352 665 9.29E-66 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL549_RS02695 9bfe9a1bebd2c9a3058fa204c07341e1 665 Pfam PF01032 FecCD transport family 369 665 4.8E-68 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL549_RS02695 9bfe9a1bebd2c9a3058fa204c07341e1 665 Pfam PF01032 FecCD transport family 30 336 9.3E-73 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL549_RS02695 9bfe9a1bebd2c9a3058fa204c07341e1 665 SUPERFAMILY SSF81345 17 336 5.1E-64 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL549_RS02695 9bfe9a1bebd2c9a3058fa204c07341e1 665 Gene3D G3DSA:1.10.3470.10 12 343 5.2E-53 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL549_RS03150 3db8214d77a9a88b263fdf5763e56a26 537 SUPERFAMILY SSF82689 435 526 1.44E-6 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AL549_RS03150 3db8214d77a9a88b263fdf5763e56a26 537 SUPERFAMILY SSF50182 367 432 6.87E-13 T 28-03-2018 IPR010920 LSM domain AL549_RS03150 3db8214d77a9a88b263fdf5763e56a26 537 Gene3D G3DSA:2.30.30.60 383 433 1.1E-12 T 28-03-2018 AL549_RS03150 3db8214d77a9a88b263fdf5763e56a26 537 Gene3D G3DSA:3.30.70.100 435 523 4.0E-10 T 28-03-2018 AL549_RS03150 3db8214d77a9a88b263fdf5763e56a26 537 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 396 430 - T 28-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AL549_RS03150 3db8214d77a9a88b263fdf5763e56a26 537 Pfam PF00924 Mechanosensitive ion channel 325 526 1.8E-42 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL549_RS03150 3db8214d77a9a88b263fdf5763e56a26 537 SUPERFAMILY SSF82861 282 365 2.75E-12 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AL549_RS07590 0f943a3971d77de1d91f10ccbecb5d73 269 SUPERFAMILY SSF55347 127 236 1.46E-37 T 28-03-2018 AL549_RS07590 0f943a3971d77de1d91f10ccbecb5d73 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 28-03-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL549_RS07590 0f943a3971d77de1d91f10ccbecb5d73 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 6.6E-41 T 28-03-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL549_RS07590 0f943a3971d77de1d91f10ccbecb5d73 269 Gene3D G3DSA:3.40.50.720 1 121 1.5E-27 T 28-03-2018 AL549_RS07590 0f943a3971d77de1d91f10ccbecb5d73 269 PIRSF PIRSF000161 1 268 3.7E-90 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL549_RS07590 0f943a3971d77de1d91f10ccbecb5d73 269 Gene3D G3DSA:3.30.360.10 126 234 5.3E-36 T 28-03-2018 AL549_RS07590 0f943a3971d77de1d91f10ccbecb5d73 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 6.1E-44 T 28-03-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL549_RS07590 0f943a3971d77de1d91f10ccbecb5d73 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 1.5E-99 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL549_RS07590 0f943a3971d77de1d91f10ccbecb5d73 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.679 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL549_RS07590 0f943a3971d77de1d91f10ccbecb5d73 269 SUPERFAMILY SSF51735 236 268 2.68E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS07590 0f943a3971d77de1d91f10ccbecb5d73 269 SUPERFAMILY SSF51735 1 126 2.68E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS17360 b68fba2e8c3c6483c7f0fbf63aa4b230 164 Gene3D G3DSA:2.40.50.180 37 100 5.4E-22 T 28-03-2018 AL549_RS17360 b68fba2e8c3c6483c7f0fbf63aa4b230 164 Gene3D G3DSA:2.30.30.40 101 134 1.2E-17 T 28-03-2018 AL549_RS17360 b68fba2e8c3c6483c7f0fbf63aa4b230 164 SMART SM00260 16 153 9.2E-50 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS17360 b68fba2e8c3c6483c7f0fbf63aa4b230 164 SUPERFAMILY SSF50341 14 158 4.97E-42 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS17360 b68fba2e8c3c6483c7f0fbf63aa4b230 164 Gene3D G3DSA:2.40.50.180 135 163 0.046 T 28-03-2018 AL549_RS17360 b68fba2e8c3c6483c7f0fbf63aa4b230 164 Pfam PF01584 CheW-like domain 20 156 2.5E-40 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS23140 5bebf174d373222397797f0f6845fcb8 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 6.5E-42 T 28-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23140 5bebf174d373222397797f0f6845fcb8 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.3E-98 T 28-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AL549_RS23140 5bebf174d373222397797f0f6845fcb8 233 Pfam PF07650 KH domain 38 111 4.1E-19 T 28-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23140 5bebf174d373222397797f0f6845fcb8 233 SUPERFAMILY SSF54814 2 106 1.62E-36 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AL549_RS23140 5bebf174d373222397797f0f6845fcb8 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 28-03-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23140 5bebf174d373222397797f0f6845fcb8 233 SUPERFAMILY SSF54821 108 206 7.72E-41 T 28-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23140 5bebf174d373222397797f0f6845fcb8 233 Gene3D G3DSA:3.30.300.20 17 107 9.1E-27 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL549_RS23140 5bebf174d373222397797f0f6845fcb8 233 Gene3D G3DSA:3.30.1140.32 108 207 4.2E-40 T 28-03-2018 AL549_RS23140 5bebf174d373222397797f0f6845fcb8 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.991 T 28-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AL549_RS23140 5bebf174d373222397797f0f6845fcb8 233 SMART SM00322 60 125 7.4E-8 T 28-03-2018 IPR004087 K Homology domain GO:0003676 AL549_RS01335 1625e3b914b3a12c4decd38cbed2f7ff 96 Pfam PF08681 Protein of unknown function (DUF1778) 8 82 5.7E-16 T 28-03-2018 IPR014795 Vibrio phage ICP1, Orf50 AL549_RS01335 1625e3b914b3a12c4decd38cbed2f7ff 96 SUPERFAMILY SSF47598 5 81 7.56E-17 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AL549_RS01335 1625e3b914b3a12c4decd38cbed2f7ff 96 Gene3D G3DSA:1.20.5.780 5 84 5.5E-19 T 28-03-2018 AL549_RS11880 8e492c61529fcacfb76cb2b5f94950b7 280 SUPERFAMILY SSF161098 7 277 1.13E-52 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS11880 8e492c61529fcacfb76cb2b5f94950b7 280 Gene3D G3DSA:1.10.3720.10 69 278 6.4E-29 T 28-03-2018 AL549_RS11880 8e492c61529fcacfb76cb2b5f94950b7 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 275 7.0E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS17280 7e0a94bbf1f79779ac4e49f2742266d8 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 65.738 T 28-03-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AL549_RS17280 7e0a94bbf1f79779ac4e49f2742266d8 435 SUPERFAMILY SSF53901 14 293 1.0E-59 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS17280 7e0a94bbf1f79779ac4e49f2742266d8 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 4.0E-35 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL549_RS17280 7e0a94bbf1f79779ac4e49f2742266d8 435 Gene3D G3DSA:3.40.47.10 290 432 9.9E-24 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS17280 7e0a94bbf1f79779ac4e49f2742266d8 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 1.5E-273 T 28-03-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AL549_RS17280 7e0a94bbf1f79779ac4e49f2742266d8 435 Gene3D G3DSA:3.40.47.10 11 289 9.6E-43 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS17280 7e0a94bbf1f79779ac4e49f2742266d8 435 SUPERFAMILY SSF53901 296 434 5.52E-30 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS17280 7e0a94bbf1f79779ac4e49f2742266d8 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 2.8E-125 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL549_RS17280 7e0a94bbf1f79779ac4e49f2742266d8 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AL549_RS17280 7e0a94bbf1f79779ac4e49f2742266d8 435 PIRSF PIRSF000429 8 435 2.3E-118 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL549_RS17280 7e0a94bbf1f79779ac4e49f2742266d8 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 2.4E-61 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL549_RS11120 1d74b12032b5a200b4d6c9ad82e2bf6e 346 Gene3D G3DSA:3.40.640.10 65 261 7.5E-40 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS11120 1d74b12032b5a200b4d6c9ad82e2bf6e 346 SUPERFAMILY SSF53383 12 343 3.16E-74 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS11120 1d74b12032b5a200b4d6c9ad82e2bf6e 346 Pfam PF00155 Aminotransferase class I and II 44 337 1.3E-55 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL549_RS11120 1d74b12032b5a200b4d6c9ad82e2bf6e 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AL549_RS11120 1d74b12032b5a200b4d6c9ad82e2bf6e 346 Gene3D G3DSA:3.90.1150.10 262 344 6.0E-9 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS11120 1d74b12032b5a200b4d6c9ad82e2bf6e 346 Gene3D G3DSA:3.90.1150.10 1 64 0.011 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS11120 1d74b12032b5a200b4d6c9ad82e2bf6e 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 53.563 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AL549_RS11120 1d74b12032b5a200b4d6c9ad82e2bf6e 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 2.9E-118 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AL549_RS00695 e910cdb46e85389a13a1de93a6206099 401 SUPERFAMILY SSF103473 7 387 7.67E-42 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS00695 e910cdb46e85389a13a1de93a6206099 401 Gene3D G3DSA:1.20.1250.20 208 389 1.6E-19 T 28-03-2018 AL549_RS00695 e910cdb46e85389a13a1de93a6206099 401 Pfam PF07690 Major Facilitator Superfamily 13 274 3.9E-15 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS00695 e910cdb46e85389a13a1de93a6206099 401 Gene3D G3DSA:1.20.1250.20 1 204 1.6E-16 T 28-03-2018 AL549_RS23400 79937b7e6de56910563ddc55281adf65 234 SMART SM00382 24 207 1.2E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS23400 79937b7e6de56910563ddc55281adf65 234 Gene3D G3DSA:3.40.50.300 1 233 1.3E-60 T 28-03-2018 AL549_RS23400 79937b7e6de56910563ddc55281adf65 234 Pfam PF00005 ABC transporter 18 157 3.7E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS23400 79937b7e6de56910563ddc55281adf65 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 210 9.7E-102 T 28-03-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 AL549_RS23400 79937b7e6de56910563ddc55281adf65 234 SUPERFAMILY SSF52540 1 231 1.1E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS23400 79937b7e6de56910563ddc55281adf65 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS09470 6952b8538c1568528d53027f813e4498 130 PIRSF PIRSF000178 2 130 9.6E-33 T 28-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS09470 6952b8538c1568528d53027f813e4498 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 1.1E-28 T 28-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS09470 6952b8538c1568528d53027f813e4498 130 Gene3D G3DSA:1.20.1300.10 4 130 2.9E-27 T 28-03-2018 AL549_RS09470 6952b8538c1568528d53027f813e4498 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 28-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS09470 6952b8538c1568528d53027f813e4498 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 1.2E-39 T 28-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS09470 6952b8538c1568528d53027f813e4498 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 28-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS09470 6952b8538c1568528d53027f813e4498 130 SUPERFAMILY SSF81343 8 130 1.16E-34 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS01505 470783484d21698d886cefe8bcf9cd14 161 Gene3D G3DSA:3.10.180.10 1 159 9.8E-27 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS01505 470783484d21698d886cefe8bcf9cd14 161 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 28-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL549_RS01505 470783484d21698d886cefe8bcf9cd14 161 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 147 1.5E-14 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL549_RS01505 470783484d21698d886cefe8bcf9cd14 161 SUPERFAMILY SSF54593 1 150 1.61E-26 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS04380 a6545652bac92e5d262e5fcd278836fe 629 Pfam PF00563 EAL domain 381 610 3.9E-55 T 28-03-2018 IPR001633 EAL domain AL549_RS04380 a6545652bac92e5d262e5fcd278836fe 629 Gene3D G3DSA:3.20.20.450 360 618 1.6E-75 T 28-03-2018 IPR001633 EAL domain AL549_RS04380 a6545652bac92e5d262e5fcd278836fe 629 SMART SM00267 188 353 3.4E-28 T 28-03-2018 IPR000160 GGDEF domain AL549_RS04380 a6545652bac92e5d262e5fcd278836fe 629 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 199 352 2.2E-25 T 28-03-2018 IPR000160 GGDEF domain AL549_RS04380 a6545652bac92e5d262e5fcd278836fe 629 SUPERFAMILY SSF55073 204 354 4.16E-33 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS04380 a6545652bac92e5d262e5fcd278836fe 629 SMART SM00052 363 615 2.3E-69 T 28-03-2018 IPR001633 EAL domain AL549_RS04380 a6545652bac92e5d262e5fcd278836fe 629 SUPERFAMILY SSF141868 382 621 3.14E-69 T 28-03-2018 IPR001633 EAL domain AL549_RS04380 a6545652bac92e5d262e5fcd278836fe 629 Gene3D G3DSA:3.30.70.270 193 359 4.5E-38 T 28-03-2018 AL549_RS04380 a6545652bac92e5d262e5fcd278836fe 629 Gene3D G3DSA:3.30.450.40 9 155 6.8E-4 T 28-03-2018 IPR029016 GAF domain-like AL549_RS04380 a6545652bac92e5d262e5fcd278836fe 629 Pfam PF00990 Diguanylate cyclase, GGDEF domain 200 349 3.7E-28 T 28-03-2018 IPR000160 GGDEF domain AL549_RS17410 3421e22c63ee5bb911c5a001ab45ff9c 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 144 160 1.8E-56 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL549_RS17410 3421e22c63ee5bb911c5a001ab45ff9c 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 193 210 1.8E-56 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL549_RS17410 3421e22c63ee5bb911c5a001ab45ff9c 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 244 258 1.8E-56 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL549_RS17410 3421e22c63ee5bb911c5a001ab45ff9c 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 40 53 1.8E-56 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL549_RS17410 3421e22c63ee5bb911c5a001ab45ff9c 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 77 96 1.8E-56 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL549_RS17410 3421e22c63ee5bb911c5a001ab45ff9c 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 163 181 1.8E-56 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL549_RS17410 3421e22c63ee5bb911c5a001ab45ff9c 700 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 24 697 6.2E-264 T 28-03-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AL549_RS17410 3421e22c63ee5bb911c5a001ab45ff9c 700 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 149 172 - T 28-03-2018 IPR025505 FHIPEP conserved site AL549_RS17410 3421e22c63ee5bb911c5a001ab45ff9c 700 PIRSF PIRSF005419 11 700 1.5E-251 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL549_RS17410 3421e22c63ee5bb911c5a001ab45ff9c 700 Pfam PF00771 FHIPEP family 34 690 8.7E-269 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL549_RS04310 970b729157913347c24dab1c5dda0c41 357 SUPERFAMILY SSF56281 93 320 7.62E-35 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS04310 970b729157913347c24dab1c5dda0c41 357 PIRSF PIRSF038896 26 345 3.7E-92 T 28-03-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 AL549_RS04310 970b729157913347c24dab1c5dda0c41 357 Gene3D G3DSA:3.60.15.10 53 351 2.8E-46 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS04310 970b729157913347c24dab1c5dda0c41 357 Pfam PF12706 Beta-lactamase superfamily domain 109 302 4.1E-42 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS01225 b261b0aea39b1041390a8ada36de9dd8 721 Pfam PF00593 TonB dependent receptor 250 719 1.4E-59 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL549_RS01225 b261b0aea39b1041390a8ada36de9dd8 721 SUPERFAMILY SSF56935 38 721 1.95E-135 T 28-03-2018 AL549_RS01225 b261b0aea39b1041390a8ada36de9dd8 721 Gene3D G3DSA:2.40.170.20 179 721 3.9E-83 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL549_RS01225 b261b0aea39b1041390a8ada36de9dd8 721 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 721 6.2E-116 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL549_RS01225 b261b0aea39b1041390a8ada36de9dd8 721 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 167 6.0E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL549_RS01225 b261b0aea39b1041390a8ada36de9dd8 721 Gene3D G3DSA:2.170.130.10 33 178 1.1E-27 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL549_RS01225 b261b0aea39b1041390a8ada36de9dd8 721 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 50 - T 28-03-2018 IPR010916 TonB box, conserved site AL549_RS09020 a056b07319c48859e99eee69740ccd9d 269 SUPERFAMILY SSF48452 190 263 6.78E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS09020 a056b07319c48859e99eee69740ccd9d 269 Pfam PF13371 Tetratricopeptide repeat 187 259 4.8E-24 T 28-03-2018 AL549_RS09020 a056b07319c48859e99eee69740ccd9d 269 Gene3D G3DSA:1.25.40.10 11 267 2.6E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS09020 a056b07319c48859e99eee69740ccd9d 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 5.0E-44 T 28-03-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL549_RS09135 2d506b9ce3bd5f30d64410e1e613ad3f 248 SMART SM00858 126 188 6.3E-8 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL549_RS09135 2d506b9ce3bd5f30d64410e1e613ad3f 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 49 246 1.8E-47 T 28-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AL549_RS09135 2d506b9ce3bd5f30d64410e1e613ad3f 248 Gene3D G3DSA:3.90.1210.10 121 187 4.5E-5 T 28-03-2018 AL549_RS09135 2d506b9ce3bd5f30d64410e1e613ad3f 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 114 246 6.5E-38 T 28-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AL549_RS20620 02e9025bcbcda04d8fac48d21256ca1d 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 8 147 2.6E-58 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL549_RS20620 02e9025bcbcda04d8fac48d21256ca1d 155 Pfam PF02556 Preprotein translocase subunit SecB 7 146 1.3E-54 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL549_RS20620 02e9025bcbcda04d8fac48d21256ca1d 155 SUPERFAMILY SSF54611 4 143 2.18E-51 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL549_RS20620 02e9025bcbcda04d8fac48d21256ca1d 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 31.672 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL549_RS20620 02e9025bcbcda04d8fac48d21256ca1d 155 Gene3D G3DSA:3.10.420.10 3 155 8.7E-53 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL549_RS20620 02e9025bcbcda04d8fac48d21256ca1d 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 1.9E-38 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL549_RS20620 02e9025bcbcda04d8fac48d21256ca1d 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 1.9E-38 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL549_RS20620 02e9025bcbcda04d8fac48d21256ca1d 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 1.9E-38 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL549_RS20620 02e9025bcbcda04d8fac48d21256ca1d 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 1.9E-38 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL549_RS02435 8bc19ca9100b30e252cb30ce5573a250 327 Gene3D G3DSA:3.40.190.10 150 221 2.8E-7 T 28-03-2018 AL549_RS02435 8bc19ca9100b30e252cb30ce5573a250 327 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 32 285 2.1E-80 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL549_RS02435 8bc19ca9100b30e252cb30ce5573a250 327 SUPERFAMILY SSF53850 137 277 3.39E-10 T 28-03-2018 AL549_RS02435 8bc19ca9100b30e252cb30ce5573a250 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 311 3.9E-88 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL549_RS02435 8bc19ca9100b30e252cb30ce5573a250 327 PIRSF PIRSF006470 1 326 2.9E-94 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL549_RS04495 d207fe310a28c69721422aaaddf48f83 47 Pfam PF11137 Protein of unknown function (DUF2909) 1 40 4.5E-11 T 28-03-2018 IPR021313 Protein of unknown function DUF2909 AL549_RS00155 b2f341860f0a152bd7323696b79f58b2 570 Pfam PF00005 ABC transporter 348 493 1.7E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS00155 b2f341860f0a152bd7323696b79f58b2 570 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 16 556 2.6E-189 T 28-03-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AL549_RS00155 b2f341860f0a152bd7323696b79f58b2 570 Gene3D G3DSA:3.40.50.300 330 563 3.6E-60 T 28-03-2018 AL549_RS00155 b2f341860f0a152bd7323696b79f58b2 570 SMART SM00382 356 551 3.2E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS00155 b2f341860f0a152bd7323696b79f58b2 570 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS00155 b2f341860f0a152bd7323696b79f58b2 570 SUPERFAMILY SSF52540 321 554 7.05E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS00155 b2f341860f0a152bd7323696b79f58b2 570 Gene3D G3DSA:1.20.1560.10 8 314 5.4E-18 T 28-03-2018 AL549_RS00155 b2f341860f0a152bd7323696b79f58b2 570 SUPERFAMILY SSF90123 14 312 1.12E-35 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS23010 c9abefa9a4881cf0ad3966876949d833 142 SUPERFAMILY SSF143422 3 131 1.7E-35 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL549_RS23010 c9abefa9a4881cf0ad3966876949d833 142 Pfam PF01797 Transposase IS200 like 12 130 4.6E-31 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL549_RS23010 c9abefa9a4881cf0ad3966876949d833 142 SMART SM01321 10 130 5.2E-32 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL549_RS23010 c9abefa9a4881cf0ad3966876949d833 142 Gene3D G3DSA:3.30.70.1290 1 137 2.1E-19 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL549_RS05925 f0c546b93ec60d72a8ccce5842c26e52 483 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 29 281 5.4E-75 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AL549_RS05925 f0c546b93ec60d72a8ccce5842c26e52 483 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 9.7E-114 T 28-03-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 AL549_RS05925 f0c546b93ec60d72a8ccce5842c26e52 483 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 28-03-2018 IPR024002 Formate/nitrite transporter, conserved site AL549_RS05925 f0c546b93ec60d72a8ccce5842c26e52 483 Pfam PF00571 CBS domain 382 464 0.0013 T 28-03-2018 IPR000644 CBS domain AL549_RS05925 f0c546b93ec60d72a8ccce5842c26e52 483 Pfam PF00571 CBS domain 313 364 6.8E-7 T 28-03-2018 IPR000644 CBS domain AL549_RS05925 f0c546b93ec60d72a8ccce5842c26e52 483 Gene3D G3DSA:1.20.1080.10 10 288 6.1E-76 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL549_RS05925 f0c546b93ec60d72a8ccce5842c26e52 483 SMART SM00116 320 368 0.017 T 28-03-2018 IPR000644 CBS domain AL549_RS05925 f0c546b93ec60d72a8ccce5842c26e52 483 SMART SM00116 418 465 11.0 T 28-03-2018 IPR000644 CBS domain AL549_RS05925 f0c546b93ec60d72a8ccce5842c26e52 483 Gene3D G3DSA:3.10.580.10 289 468 1.1E-22 T 28-03-2018 AL549_RS05925 f0c546b93ec60d72a8ccce5842c26e52 483 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 28-03-2018 IPR024002 Formate/nitrite transporter, conserved site AL549_RS05925 f0c546b93ec60d72a8ccce5842c26e52 483 SUPERFAMILY SSF54631 430 464 1.59E-21 T 28-03-2018 AL549_RS05925 f0c546b93ec60d72a8ccce5842c26e52 483 SUPERFAMILY SSF54631 292 398 1.59E-21 T 28-03-2018 AL549_RS05925 f0c546b93ec60d72a8ccce5842c26e52 483 Pfam PF01226 Formate/nitrite transporter 17 277 2.8E-70 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AL549_RS03340 ae5c06a0ed16cf4e47e4c6c7cd2ba1bb 354 PIRSF PIRSF005508 3 354 7.3E-139 T 28-03-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AL549_RS03340 ae5c06a0ed16cf4e47e4c6c7cd2ba1bb 354 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 16 345 2.6E-142 T 28-03-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AL549_RS03340 ae5c06a0ed16cf4e47e4c6c7cd2ba1bb 354 Pfam PF01758 Sodium Bile acid symporter family 61 257 1.0E-61 T 28-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AL549_RS15460 35cd95ce2ab2a5be51e82ad4ac9f351b 237 Gene3D G3DSA:3.90.79.10 3 155 2.7E-17 T 28-03-2018 AL549_RS15460 35cd95ce2ab2a5be51e82ad4ac9f351b 237 SUPERFAMILY SSF55811 2 156 2.03E-17 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL549_RS15460 35cd95ce2ab2a5be51e82ad4ac9f351b 237 Gene3D G3DSA:1.10.10.10 156 234 3.5E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS15145 ac894569baab4119a7b88a379180358c 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.5E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS00055 deafb6bb2db5cd5072a658f1f207ee0a 305 Gene3D G3DSA:3.40.630.10 26 304 5.2E-23 T 28-03-2018 AL549_RS00055 deafb6bb2db5cd5072a658f1f207ee0a 305 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 78 176 2.5E-7 T 28-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL549_RS00055 deafb6bb2db5cd5072a658f1f207ee0a 305 SUPERFAMILY SSF53187 38 288 8.6E-35 T 28-03-2018 AL549_RS01650 3ef0e1cdddc4c777153ebae9d8c94352 436 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 4 431 2.1E-203 T 28-03-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 AL549_RS01650 3ef0e1cdddc4c777153ebae9d8c94352 436 PIRSF PIRSF006060 1 432 1.6E-51 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL549_RS01650 3ef0e1cdddc4c777153ebae9d8c94352 436 Pfam PF13520 Amino acid permease 9 414 6.1E-46 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL549_RS01650 3ef0e1cdddc4c777153ebae9d8c94352 436 Hamap MF_02073 Putrescine transporter PotE [potE]. 8 435 34.659 T 28-03-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 AL549_RS01650 3ef0e1cdddc4c777153ebae9d8c94352 436 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 430 9.0E-126 T 28-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AL549_RS05950 24a7b8c00586df1d0d9ef1a122eda91e 418 Pfam PF00271 Helicase conserved C-terminal domain 237 342 3.6E-27 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS05950 24a7b8c00586df1d0d9ef1a122eda91e 418 Pfam PF00270 DEAD/DEAH box helicase 27 198 1.4E-57 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL549_RS05950 24a7b8c00586df1d0d9ef1a122eda91e 418 Gene3D G3DSA:3.40.50.300 13 225 2.4E-68 T 28-03-2018 AL549_RS05950 24a7b8c00586df1d0d9ef1a122eda91e 418 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL549_RS05950 24a7b8c00586df1d0d9ef1a122eda91e 418 SMART SM00490 261 342 3.3E-30 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS05950 24a7b8c00586df1d0d9ef1a122eda91e 418 Gene3D G3DSA:3.40.50.300 226 418 2.7E-43 T 28-03-2018 AL549_RS05950 24a7b8c00586df1d0d9ef1a122eda91e 418 SMART SM00487 22 225 1.9E-67 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS05950 24a7b8c00586df1d0d9ef1a122eda91e 418 SUPERFAMILY SSF52540 77 363 1.31E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS22795 9519e52da00d9b643174a5378e8169fb 612 Gene3D G3DSA:3.40.720.10 247 550 1.7E-41 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS22795 9519e52da00d9b643174a5378e8169fb 612 SUPERFAMILY SSF53649 245 590 5.23E-59 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS22795 9519e52da00d9b643174a5378e8169fb 612 Pfam PF00884 Sulfatase 248 527 2.4E-33 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL549_RS22795 9519e52da00d9b643174a5378e8169fb 612 PIRSF PIRSF004950 1 612 6.7E-227 T 28-03-2018 IPR012159 Inner membrane protein YejM AL549_RS22795 9519e52da00d9b643174a5378e8169fb 612 Pfam PF11893 Domain of unknown function (DUF3413) 3 239 1.2E-55 T 28-03-2018 IPR024588 Inner membrane protein YejM, N-terminal AL549_RS02225 fce28c23d01b5c64d3a014f56580eccc 488 ProSitePatterns PS00523 Sulfatases signature 1. 53 65 - T 28-03-2018 IPR024607 Sulfatase, conserved site AL549_RS02225 fce28c23d01b5c64d3a014f56580eccc 488 Pfam PF16385 Domain of unknown function 383 478 6.2E-21 T 28-03-2018 IPR032158 Domain of unknown function DUF4994 AL549_RS02225 fce28c23d01b5c64d3a014f56580eccc 488 Pfam PF00884 Sulfatase 7 379 5.6E-69 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL549_RS02225 fce28c23d01b5c64d3a014f56580eccc 488 ProSitePatterns PS00149 Sulfatases signature 2. 100 110 - T 28-03-2018 IPR024607 Sulfatase, conserved site AL549_RS02225 fce28c23d01b5c64d3a014f56580eccc 488 Gene3D G3DSA:3.30.1120.10 404 484 1.3E-10 T 28-03-2018 AL549_RS02225 fce28c23d01b5c64d3a014f56580eccc 488 Gene3D G3DSA:3.40.720.10 271 403 3.7E-26 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS02225 fce28c23d01b5c64d3a014f56580eccc 488 Gene3D G3DSA:3.40.720.10 4 270 5.4E-54 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS02225 fce28c23d01b5c64d3a014f56580eccc 488 SUPERFAMILY SSF53649 5 483 8.64E-119 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS03015 ca0a6cf6cce7245c789951d3196ee13b 133 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 40 129 9.0E-34 T 28-03-2018 IPR009707 Membrane protein GlpM/YdgC AL549_RS03015 ca0a6cf6cce7245c789951d3196ee13b 133 Pfam PF06942 GlpM protein 24 129 2.2E-50 T 28-03-2018 IPR009707 Membrane protein GlpM/YdgC AL549_RS01195 325d6d6a1b8c0c62e40cdc6d3e3a8f22 494 PRINTS PR00163 Rubredoxin signature 473 489 1.3E-5 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 AL549_RS01195 325d6d6a1b8c0c62e40cdc6d3e3a8f22 494 PRINTS PR00163 Rubredoxin signature 443 459 1.3E-5 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 AL549_RS01195 325d6d6a1b8c0c62e40cdc6d3e3a8f22 494 SUPERFAMILY SSF52218 251 396 3.35E-35 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS01195 325d6d6a1b8c0c62e40cdc6d3e3a8f22 494 Gene3D G3DSA:2.20.28.10 440 494 1.5E-17 T 28-03-2018 AL549_RS01195 325d6d6a1b8c0c62e40cdc6d3e3a8f22 494 SUPERFAMILY SSF57802 441 492 2.69E-16 T 28-03-2018 AL549_RS01195 325d6d6a1b8c0c62e40cdc6d3e3a8f22 494 Pfam PF00753 Metallo-beta-lactamase superfamily 34 175 4.6E-9 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS01195 325d6d6a1b8c0c62e40cdc6d3e3a8f22 494 Gene3D G3DSA:3.40.50.360 256 395 3.7E-21 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS01195 325d6d6a1b8c0c62e40cdc6d3e3a8f22 494 Pfam PF00301 Rubredoxin 444 489 3.9E-17 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 AL549_RS01195 325d6d6a1b8c0c62e40cdc6d3e3a8f22 494 Gene3D G3DSA:3.60.15.10 1 255 1.5E-42 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS01195 325d6d6a1b8c0c62e40cdc6d3e3a8f22 494 PIRSF PIRSF005243 1 426 4.9E-175 T 28-03-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 AL549_RS01195 325d6d6a1b8c0c62e40cdc6d3e3a8f22 494 Pfam PF00258 Flavodoxin 256 388 3.7E-11 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL549_RS01195 325d6d6a1b8c0c62e40cdc6d3e3a8f22 494 SUPERFAMILY SSF56281 8 283 6.91E-52 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS01195 325d6d6a1b8c0c62e40cdc6d3e3a8f22 494 SMART SM00849 34 227 6.3E-29 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS04390 0076f1712c7956daa98614a2a100c831 397 Gene3D G3DSA:1.20.1250.20 1 196 3.6E-29 T 28-03-2018 AL549_RS04390 0076f1712c7956daa98614a2a100c831 397 SUPERFAMILY SSF103473 4 384 3.4E-57 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS04390 0076f1712c7956daa98614a2a100c831 397 Pfam PF07690 Major Facilitator Superfamily 21 351 1.3E-42 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS04390 0076f1712c7956daa98614a2a100c831 397 Gene3D G3DSA:1.20.1250.20 198 387 3.3E-15 T 28-03-2018 AL549_RS07210 f6c6512fce161dbf47255dbe07416968 299 Gene3D G3DSA:2.30.140.10 18 38 0.0011 T 28-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AL549_RS07210 f6c6512fce161dbf47255dbe07416968 299 Gene3D G3DSA:3.40.50.150 39 297 1.3E-26 T 28-03-2018 AL549_RS07210 f6c6512fce161dbf47255dbe07416968 299 SUPERFAMILY SSF53335 18 254 4.57E-47 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS07210 f6c6512fce161dbf47255dbe07416968 299 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 7 293 18.506 T 28-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AL549_RS07210 f6c6512fce161dbf47255dbe07416968 299 Pfam PF01564 Spermine/spermidine synthase domain 83 216 9.4E-7 T 28-03-2018 AL549_RS19825 d714b57cb9a0416fb2fa621c53ebeca8 373 Pfam PF14559 Tetratricopeptide repeat 195 250 1.7E-5 T 28-03-2018 AL549_RS19825 d714b57cb9a0416fb2fa621c53ebeca8 373 SUPERFAMILY SSF48452 185 347 2.72E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS19825 d714b57cb9a0416fb2fa621c53ebeca8 373 SMART SM00028 219 252 15.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS19825 d714b57cb9a0416fb2fa621c53ebeca8 373 SMART SM00028 319 352 340.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS19825 d714b57cb9a0416fb2fa621c53ebeca8 373 SMART SM00028 185 218 24.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS19825 d714b57cb9a0416fb2fa621c53ebeca8 373 SMART SM00028 285 318 250.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS19825 d714b57cb9a0416fb2fa621c53ebeca8 373 Gene3D G3DSA:1.25.40.10 277 373 1.5E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS19825 d714b57cb9a0416fb2fa621c53ebeca8 373 Gene3D G3DSA:1.25.40.10 150 276 4.3E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS04335 896f7040369364b6a509d38316cddf2f 316 Gene3D G3DSA:1.10.287.470 115 146 4.6E-12 T 28-03-2018 AL549_RS04335 896f7040369364b6a509d38316cddf2f 316 SUPERFAMILY SSF111369 100 157 1.12E-6 T 28-03-2018 AL549_RS04335 896f7040369364b6a509d38316cddf2f 316 SUPERFAMILY SSF111369 32 87 1.7E-5 T 28-03-2018 AL549_RS04335 896f7040369364b6a509d38316cddf2f 316 Gene3D G3DSA:1.20.1600.10 182 312 0.012 T 28-03-2018 AL549_RS04335 896f7040369364b6a509d38316cddf2f 316 Gene3D G3DSA:1.20.1270.60 147 181 2.8E-4 T 28-03-2018 AL549_RS04335 896f7040369364b6a509d38316cddf2f 316 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 243 266 4.6E-6 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS04335 896f7040369364b6a509d38316cddf2f 316 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 44 64 4.6E-6 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL549_RS04335 896f7040369364b6a509d38316cddf2f 316 Gene3D G3DSA:2.40.50.100 34 114 4.1E-9 T 28-03-2018 AL549_RS04335 896f7040369364b6a509d38316cddf2f 316 Pfam PF13533 Biotin-lipoyl like 44 77 1.9E-6 T 28-03-2018 AL549_RS04335 896f7040369364b6a509d38316cddf2f 316 Pfam PF13437 HlyD family secretion protein 195 274 6.5E-7 T 28-03-2018 AL549_RS00705 b77f68f755b0cf0f54c7c292c751a83a 118 Gene3D G3DSA:1.20.120.330 1 93 3.2E-4 T 28-03-2018 AL549_RS00705 b77f68f755b0cf0f54c7c292c751a83a 118 Pfam PF10928 Protein of unknown function (DUF2810) 65 116 1.6E-31 T 28-03-2018 IPR021230 Protein of unknown function DUF2810 AL549_RS21640 ac465f2e844606c6eab52c77f634d9d3 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 2.0E-27 T 28-03-2018 IPR001498 Impact, N-terminal AL549_RS21640 ac465f2e844606c6eab52c77f634d9d3 207 SUPERFAMILY SSF54211 5 134 3.19E-43 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL549_RS21640 ac465f2e844606c6eab52c77f634d9d3 207 Gene3D G3DSA:3.30.70.240 138 201 3.0E-9 T 28-03-2018 AL549_RS21640 ac465f2e844606c6eab52c77f634d9d3 207 SUPERFAMILY SSF54980 139 201 1.73E-9 T 28-03-2018 IPR035647 EF-G domain III/V-like AL549_RS21640 ac465f2e844606c6eab52c77f634d9d3 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 198 1.8E-12 T 28-03-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AL549_RS21640 ac465f2e844606c6eab52c77f634d9d3 207 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 82 111 - T 28-03-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AL549_RS21640 ac465f2e844606c6eab52c77f634d9d3 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 199 8.9E-70 T 28-03-2018 IPR015796 Impact family, bacterial/archaeal AL549_RS21640 ac465f2e844606c6eab52c77f634d9d3 207 Gene3D G3DSA:3.30.230.30 8 136 6.4E-38 T 28-03-2018 IPR001498 Impact, N-terminal AL549_RS06370 4e87a76fe117061ce6f9d5abff2acaff 728 Gene3D G3DSA:3.90.10.10 90 326 5.0E-12 T 28-03-2018 AL549_RS06370 4e87a76fe117061ce6f9d5abff2acaff 728 TIGRFAM TIGR03507 decahem_SO1788: decaheme c-type cytochrome, OmcA/MtrC family 47 722 1.2E-163 T 28-03-2018 IPR020014 Decahaem cytochrome, c-type, OmcA/MtrC AL549_RS06370 4e87a76fe117061ce6f9d5abff2acaff 728 Gene3D G3DSA:3.90.10.10 327 382 0.019 T 28-03-2018 AL549_RS06370 4e87a76fe117061ce6f9d5abff2acaff 728 SUPERFAMILY SSF48695 275 358 7.66E-26 T 28-03-2018 IPR011031 Multihaem cytochrome AL549_RS06370 4e87a76fe117061ce6f9d5abff2acaff 728 SUPERFAMILY SSF48695 542 713 7.66E-26 T 28-03-2018 IPR011031 Multihaem cytochrome AL549_RS06370 4e87a76fe117061ce6f9d5abff2acaff 728 Gene3D G3DSA:1.10.3820.10 518 727 3.0E-11 T 28-03-2018 AL549_RS20085 ffaacb0d8b97b41a66489cb43ce2897d 363 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 358 43.598 T 28-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL549_RS20085 ffaacb0d8b97b41a66489cb43ce2897d 363 PIRSF PIRSF001455 4 361 6.3E-108 T 28-03-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL549_RS20085 ffaacb0d8b97b41a66489cb43ce2897d 363 SUPERFAMILY SSF56796 4 357 1.07E-118 T 28-03-2018 AL549_RS20085 ffaacb0d8b97b41a66489cb43ce2897d 363 Gene3D G3DSA:1.20.1090.10 173 362 2.7E-70 T 28-03-2018 AL549_RS20085 ffaacb0d8b97b41a66489cb43ce2897d 363 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 355 5.3E-122 T 28-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL549_RS20085 ffaacb0d8b97b41a66489cb43ce2897d 363 Pfam PF01761 3-dehydroquinate synthase 68 325 2.1E-111 T 28-03-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL549_RS20085 ffaacb0d8b97b41a66489cb43ce2897d 363 Gene3D G3DSA:3.40.50.1970 3 172 9.0E-51 T 28-03-2018 AL549_RS03985 b02f72fadf73b4c3de4cd22acb380d95 394 Pfam PF13729 F plasmid transfer operon, TraF, protein 51 311 5.3E-75 T 28-03-2018 IPR032811 Putative conjugal transfer protein TraF-related AL549_RS03985 b02f72fadf73b4c3de4cd22acb380d95 394 Gene3D G3DSA:2.40.160.60 25 393 9.6E-33 T 28-03-2018 AL549_RS09750 c8750dff720b3cb7733a6fcae7a83b53 356 PIRSF PIRSF005739 3 345 6.1E-11 T 28-03-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 AL549_RS09750 c8750dff720b3cb7733a6fcae7a83b53 356 Pfam PF00891 O-methyltransferase 169 338 3.1E-14 T 28-03-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 AL549_RS09750 c8750dff720b3cb7733a6fcae7a83b53 356 SUPERFAMILY SSF46785 19 99 2.18E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS09750 c8750dff720b3cb7733a6fcae7a83b53 356 SUPERFAMILY SSF53335 99 341 1.09E-37 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS09750 c8750dff720b3cb7733a6fcae7a83b53 356 Gene3D G3DSA:3.40.50.150 98 346 8.7E-29 T 28-03-2018 AL549_RS09750 c8750dff720b3cb7733a6fcae7a83b53 356 Gene3D G3DSA:1.10.10.10 9 97 3.7E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS11990 ebbba20b6d224c6a7084519bf55ced08 625 Gene3D G3DSA:3.40.50.980 243 404 1.1E-36 T 28-03-2018 AL549_RS11990 ebbba20b6d224c6a7084519bf55ced08 625 Gene3D G3DSA:2.30.38.10 405 494 2.8E-9 T 28-03-2018 AL549_RS11990 ebbba20b6d224c6a7084519bf55ced08 625 Pfam PF00501 AMP-binding enzyme 65 501 2.2E-80 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL549_RS11990 ebbba20b6d224c6a7084519bf55ced08 625 Gene3D G3DSA:3.30.300.30 495 605 3.0E-26 T 28-03-2018 AL549_RS11990 ebbba20b6d224c6a7084519bf55ced08 625 Gene3D G3DSA:3.40.50.980 52 242 6.5E-42 T 28-03-2018 AL549_RS11990 ebbba20b6d224c6a7084519bf55ced08 625 SUPERFAMILY SSF56801 3 616 2.49E-152 T 28-03-2018 AL549_RS11990 ebbba20b6d224c6a7084519bf55ced08 625 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 1.7E-26 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL549_RS11990 ebbba20b6d224c6a7084519bf55ced08 625 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL549_RS11990 ebbba20b6d224c6a7084519bf55ced08 625 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 5.5E-11 T 28-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AL549_RS13910 b5d14fced2ff7c1eda161de149496412 499 Gene3D G3DSA:1.20.120.330 278 464 0.0018 T 28-03-2018 AL549_RS04890 b2241f901f0a02899dfad299521d6b4d 153 Pfam PF02794 RTX toxin acyltransferase family 18 150 2.5E-47 T 28-03-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 AL549_RS04890 b2241f901f0a02899dfad299521d6b4d 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 63 81 6.7E-6 T 28-03-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 AL549_RS04890 b2241f901f0a02899dfad299521d6b4d 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 20 36 6.7E-6 T 28-03-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 AL549_RS04890 b2241f901f0a02899dfad299521d6b4d 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 85 107 6.7E-6 T 28-03-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 AL549_RS17730 d1ed144af8736eddc0131bc32cd705a8 547 SUPERFAMILY SSF54106 437 482 1.44E-10 T 28-03-2018 IPR018392 LysM domain AL549_RS17730 d1ed144af8736eddc0131bc32cd705a8 547 Pfam PF06474 MltD lipid attachment motif 2 39 5.6E-17 T 28-03-2018 IPR010511 Lytic murein transglycosylase D , lipid attachment domain AL549_RS17730 d1ed144af8736eddc0131bc32cd705a8 547 Gene3D G3DSA:1.10.530.10 37 279 4.3E-36 T 28-03-2018 AL549_RS17730 d1ed144af8736eddc0131bc32cd705a8 547 SUPERFAMILY SSF54106 363 407 3.92E-10 T 28-03-2018 IPR018392 LysM domain AL549_RS17730 d1ed144af8736eddc0131bc32cd705a8 547 Gene3D G3DSA:3.10.350.10 361 412 1.7E-12 T 28-03-2018 AL549_RS17730 d1ed144af8736eddc0131bc32cd705a8 547 Gene3D G3DSA:3.10.350.10 434 487 3.3E-13 T 28-03-2018 AL549_RS17730 d1ed144af8736eddc0131bc32cd705a8 547 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 154 182 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AL549_RS17730 d1ed144af8736eddc0131bc32cd705a8 547 Pfam PF01464 Transglycosylase SLT domain 148 247 9.7E-23 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AL549_RS17730 d1ed144af8736eddc0131bc32cd705a8 547 Pfam PF01476 LysM domain 365 407 5.4E-10 T 28-03-2018 IPR018392 LysM domain AL549_RS17730 d1ed144af8736eddc0131bc32cd705a8 547 Pfam PF01476 LysM domain 496 538 7.3E-12 T 28-03-2018 IPR018392 LysM domain AL549_RS17730 d1ed144af8736eddc0131bc32cd705a8 547 Pfam PF01476 LysM domain 439 481 4.4E-12 T 28-03-2018 IPR018392 LysM domain AL549_RS17730 d1ed144af8736eddc0131bc32cd705a8 547 SUPERFAMILY SSF53955 133 288 2.39E-41 T 28-03-2018 IPR023346 Lysozyme-like domain AL549_RS17730 d1ed144af8736eddc0131bc32cd705a8 547 SUPERFAMILY SSF54106 494 539 5.89E-10 T 28-03-2018 IPR018392 LysM domain AL549_RS17730 d1ed144af8736eddc0131bc32cd705a8 547 SMART SM00257 438 482 2.0E-13 T 28-03-2018 IPR018392 LysM domain AL549_RS17730 d1ed144af8736eddc0131bc32cd705a8 547 SMART SM00257 495 539 1.0E-10 T 28-03-2018 IPR018392 LysM domain AL549_RS17730 d1ed144af8736eddc0131bc32cd705a8 547 SMART SM00257 364 407 5.6E-12 T 28-03-2018 IPR018392 LysM domain AL549_RS17730 d1ed144af8736eddc0131bc32cd705a8 547 Gene3D G3DSA:3.10.350.10 492 546 3.3E-12 T 28-03-2018 AL549_RS10865 4a1162ad53da4926b9cde4f325422f2f 347 Gene3D G3DSA:1.10.3720.10 10 331 4.2E-39 T 28-03-2018 AL549_RS10865 4a1162ad53da4926b9cde4f325422f2f 347 SUPERFAMILY SSF161098 139 325 3.4E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS10865 4a1162ad53da4926b9cde4f325422f2f 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 8.8E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS12885 89a5dbce43b45e7c6ee54dc5850f0d01 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 8.6E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS06725 4c8f88d338a9852ac0f62ea9e0a9b49b 335 Gene3D G3DSA:3.40.640.10 16 246 2.1E-48 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS06725 4c8f88d338a9852ac0f62ea9e0a9b49b 335 Pfam PF01212 Beta-eliminating lyase 2 283 4.5E-100 T 28-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AL549_RS06725 4c8f88d338a9852ac0f62ea9e0a9b49b 335 SUPERFAMILY SSF53383 1 334 7.18E-119 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS06725 4c8f88d338a9852ac0f62ea9e0a9b49b 335 Gene3D G3DSA:3.90.1150.10 247 335 3.9E-25 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS06725 4c8f88d338a9852ac0f62ea9e0a9b49b 335 PIRSF PIRSF017617 1 334 5.9E-133 T 28-03-2018 IPR023603 Threonine aldolase AL549_RS04270 7ad721ed14cf3a8c025b4338ec301562 207 Gene3D G3DSA:2.160.10.10 1 207 3.0E-46 T 28-03-2018 AL549_RS04270 7ad721ed14cf3a8c025b4338ec301562 207 SUPERFAMILY SSF51161 18 204 3.05E-43 T 28-03-2018 IPR011004 Trimeric LpxA-like AL549_RS04270 7ad721ed14cf3a8c025b4338ec301562 207 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 143 1.7E-10 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS04270 7ad721ed14cf3a8c025b4338ec301562 207 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 117 145 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL549_RS19255 856939cd7993db949784a80064f56a97 170 SUPERFAMILY SSF55826 6 157 1.06E-37 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL549_RS19255 856939cd7993db949784a80064f56a97 170 Gene3D G3DSA:3.90.960.10 2 160 4.2E-34 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL549_RS19255 856939cd7993db949784a80064f56a97 170 Pfam PF04073 Aminoacyl-tRNA editing domain 29 146 3.3E-25 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL549_RS01755 420f3a06bfc4f608d6b543f4ed3b2783 349 Pfam PF01757 Acyltransferase family 16 335 1.1E-24 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AL549_RS03370 db766e4d559da87aad66e2d136121147 163 Gene3D G3DSA:1.25.40.10 62 157 1.0E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS03370 db766e4d559da87aad66e2d136121147 163 SMART SM00028 72 105 0.0054 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS03370 db766e4d559da87aad66e2d136121147 163 SMART SM00028 35 68 300.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS03370 db766e4d559da87aad66e2d136121147 163 SUPERFAMILY SSF48452 5 152 2.73E-16 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS03370 db766e4d559da87aad66e2d136121147 163 Pfam PF12688 Tetratrico peptide repeat 41 156 1.4E-12 T 28-03-2018 AL549_RS03370 db766e4d559da87aad66e2d136121147 163 Gene3D G3DSA:1.25.40.10 3 61 5.4E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS18100 9411ff2c8f6a648511e9e21bb2688289 269 Gene3D G3DSA:3.40.50.720 6 269 2.3E-53 T 28-03-2018 AL549_RS18100 9411ff2c8f6a648511e9e21bb2688289 269 Pfam PF00899 ThiF family 23 263 5.3E-38 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL549_RS18100 9411ff2c8f6a648511e9e21bb2688289 269 SUPERFAMILY SSF69572 9 267 1.7E-65 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL549_RS00675 106b9727eebaf78751060ba21ea3087f 317 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 5.7E-23 T 28-03-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AL549_RS00675 106b9727eebaf78751060ba21ea3087f 317 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 141 1.9E-30 T 28-03-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AL549_RS00675 106b9727eebaf78751060ba21ea3087f 317 SUPERFAMILY SSF56327 143 308 2.16E-42 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL549_RS00675 106b9727eebaf78751060ba21ea3087f 317 Gene3D G3DSA:3.90.110.10 144 315 1.4E-35 T 28-03-2018 AL549_RS00675 106b9727eebaf78751060ba21ea3087f 317 PIRSF PIRSF000102 1 317 7.5E-89 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AL549_RS00675 106b9727eebaf78751060ba21ea3087f 317 SUPERFAMILY SSF51735 2 144 1.63E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS00675 106b9727eebaf78751060ba21ea3087f 317 Gene3D G3DSA:3.40.50.720 2 143 4.2E-27 T 28-03-2018 AL549_RS00675 106b9727eebaf78751060ba21ea3087f 317 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 1.3E-20 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AL549_RS00675 106b9727eebaf78751060ba21ea3087f 317 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 1.3E-20 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AL549_RS00675 106b9727eebaf78751060ba21ea3087f 317 PRINTS PR00086 L-lactate dehydrogenase signature 140 158 1.3E-20 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AL549_RS00675 106b9727eebaf78751060ba21ea3087f 317 PRINTS PR00086 L-lactate dehydrogenase signature 116 136 1.3E-20 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AL549_RS00675 106b9727eebaf78751060ba21ea3087f 317 PRINTS PR00086 L-lactate dehydrogenase signature 170 183 1.3E-20 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AL549_RS13605 5d63853d4d47e20e37c416ee40ce502c 247 SUPERFAMILY SSF55729 98 146 5.0E-5 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS13605 5d63853d4d47e20e37c416ee40ce502c 247 SUPERFAMILY SSF55729 11 70 5.0E-5 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS13605 5d63853d4d47e20e37c416ee40ce502c 247 Gene3D G3DSA:3.40.630.30 10 206 3.5E-11 T 28-03-2018 AL549_RS10340 33df0e61be32082ce7a0b015f5413b1d 81 SUPERFAMILY SSF54285 1 81 2.06E-23 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AL549_RS10340 33df0e61be32082ce7a0b015f5413b1d 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 3.1E-23 T 28-03-2018 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 AL549_RS10340 33df0e61be32082ce7a0b015f5413b1d 81 Gene3D G3DSA:3.10.20.30 1 81 1.2E-19 T 28-03-2018 IPR012675 Beta-grasp domain AL549_RS10340 33df0e61be32082ce7a0b015f5413b1d 81 Pfam PF02597 ThiS family 4 81 9.3E-24 T 28-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 AL549_RS10005 16e49999d1d585dfddd35a400db0d6e6 153 Gene3D G3DSA:1.10.10.10 3 54 6.0E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS10005 16e49999d1d585dfddd35a400db0d6e6 153 SUPERFAMILY SSF54909 62 151 2.15E-21 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL549_RS10005 16e49999d1d585dfddd35a400db0d6e6 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 2.3E-13 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS10005 16e49999d1d585dfddd35a400db0d6e6 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 2.3E-13 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS10005 16e49999d1d585dfddd35a400db0d6e6 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 2.3E-13 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS10005 16e49999d1d585dfddd35a400db0d6e6 153 SUPERFAMILY SSF46785 2 91 1.47E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS10005 16e49999d1d585dfddd35a400db0d6e6 153 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 1.6E-21 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL549_RS10005 16e49999d1d585dfddd35a400db0d6e6 153 SMART SM00344 2 111 3.2E-46 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL549_RS10005 16e49999d1d585dfddd35a400db0d6e6 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 1.4E-17 T 28-03-2018 AL549_RS10005 16e49999d1d585dfddd35a400db0d6e6 153 Gene3D G3DSA:3.30.70.920 55 152 4.8E-24 T 28-03-2018 AL549_RS10005 16e49999d1d585dfddd35a400db0d6e6 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL549_RS17445 d67282e3477ed193a02037ec3685e49d 347 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 320 1.8E-121 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL549_RS17445 d67282e3477ed193a02037ec3685e49d 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 9.9E-19 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL549_RS17445 d67282e3477ed193a02037ec3685e49d 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 9.9E-19 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL549_RS17445 d67282e3477ed193a02037ec3685e49d 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 9.9E-19 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL549_RS17445 d67282e3477ed193a02037ec3685e49d 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 9.9E-19 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL549_RS17445 d67282e3477ed193a02037ec3685e49d 347 SUPERFAMILY SSF103039 54 230 5.75E-21 T 28-03-2018 IPR028976 CheC-like domain AL549_RS17445 d67282e3477ed193a02037ec3685e49d 347 SUPERFAMILY SSF103039 4 13 5.75E-21 T 28-03-2018 IPR028976 CheC-like domain AL549_RS17445 d67282e3477ed193a02037ec3685e49d 347 Gene3D G3DSA:3.40.1550.10 45 234 2.4E-43 T 28-03-2018 IPR028976 CheC-like domain AL549_RS17445 d67282e3477ed193a02037ec3685e49d 347 Gene3D G3DSA:2.30.330.10 237 328 4.1E-16 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL549_RS17445 d67282e3477ed193a02037ec3685e49d 347 PIRSF PIRSF002888 1 328 9.6E-90 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL549_RS17445 d67282e3477ed193a02037ec3685e49d 347 SUPERFAMILY SSF101801 247 322 3.53E-13 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL549_RS17445 d67282e3477ed193a02037ec3685e49d 347 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 1.8E-16 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL549_RS17445 d67282e3477ed193a02037ec3685e49d 347 Pfam PF02154 Flagellar motor switch protein FliM 37 229 2.2E-83 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL549_RS20890 5c47a56625da7391f3a56da70b720a89 234 PIRSF PIRSF028160 1 234 6.3E-124 T 28-03-2018 IPR016872 Uncharacterised conserved protein UCP028160 AL549_RS20890 5c47a56625da7391f3a56da70b720a89 234 Pfam PF07356 Protein of unknown function (DUF1481) 36 229 5.2E-59 T 28-03-2018 IPR010858 Protein of unknown function DUF1481 AL549_RS22315 ecc5b1b2baf54b78b1ed59bd6ddce10b 528 Gene3D G3DSA:1.20.5.340 192 343 2.5E-18 T 28-03-2018 AL549_RS22315 ecc5b1b2baf54b78b1ed59bd6ddce10b 528 Pfam PF02646 RmuC family 182 477 1.5E-104 T 28-03-2018 IPR003798 DNA recombination RmuC AL549_RS00025 5a78421a5a4cf362f75f882eacbd8c2a 174 Gene3D G3DSA:3.40.50.620 1 173 1.3E-28 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS00025 5a78421a5a4cf362f75f882eacbd8c2a 174 Pfam PF01467 Cytidylyltransferase-like 7 143 1.7E-7 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL549_RS00025 5a78421a5a4cf362f75f882eacbd8c2a 174 SUPERFAMILY SSF52374 1 171 8.44E-25 T 28-03-2018 AL549_RS10565 8cef44323c93d8db47c0ed0b1354a16c 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 4.5E-173 T 28-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL549_RS10565 8cef44323c93d8db47c0ed0b1354a16c 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 4.2E-39 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL549_RS10565 8cef44323c93d8db47c0ed0b1354a16c 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 4.2E-39 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL549_RS10565 8cef44323c93d8db47c0ed0b1354a16c 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 4.2E-39 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL549_RS10565 8cef44323c93d8db47c0ed0b1354a16c 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 4.2E-39 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL549_RS10565 8cef44323c93d8db47c0ed0b1354a16c 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 4.2E-39 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL549_RS10565 8cef44323c93d8db47c0ed0b1354a16c 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 4.2E-39 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL549_RS10565 8cef44323c93d8db47c0ed0b1354a16c 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 664 5.4E-114 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL549_RS10565 8cef44323c93d8db47c0ed0b1354a16c 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL549_RS10565 8cef44323c93d8db47c0ed0b1354a16c 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 1.9E-11 T 28-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL549_RS10565 8cef44323c93d8db47c0ed0b1354a16c 760 SUPERFAMILY SSF51998 222 739 1.8E-164 T 28-03-2018 AL549_RS10565 8cef44323c93d8db47c0ed0b1354a16c 760 Pfam PF03477 ATP cone domain 6 92 1.8E-18 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AL549_RS10565 8cef44323c93d8db47c0ed0b1354a16c 760 SUPERFAMILY SSF48168 10 221 7.19E-75 T 28-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL549_RS10565 8cef44323c93d8db47c0ed0b1354a16c 760 Gene3D G3DSA:3.20.70.20 122 739 1.4E-148 T 28-03-2018 AL549_RS10490 01e8736ca459a76dee7c794e97ed66d4 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS10490 01e8736ca459a76dee7c794e97ed66d4 214 SMART SM00448 2 115 1.2E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS10490 01e8736ca459a76dee7c794e97ed66d4 214 SMART SM00421 146 203 9.8E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS10490 01e8736ca459a76dee7c794e97ed66d4 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 3.8E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS10490 01e8736ca459a76dee7c794e97ed66d4 214 SUPERFAMILY SSF52172 2 132 3.42E-33 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS10490 01e8736ca459a76dee7c794e97ed66d4 214 Gene3D G3DSA:1.10.10.10 127 213 1.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS10490 01e8736ca459a76dee7c794e97ed66d4 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.1E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS10490 01e8736ca459a76dee7c794e97ed66d4 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.1E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS10490 01e8736ca459a76dee7c794e97ed66d4 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.1E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS10490 01e8736ca459a76dee7c794e97ed66d4 214 SUPERFAMILY SSF46894 136 210 2.41E-18 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS10490 01e8736ca459a76dee7c794e97ed66d4 214 Pfam PF00072 Response regulator receiver domain 4 116 1.1E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS10490 01e8736ca459a76dee7c794e97ed66d4 214 Gene3D G3DSA:3.40.50.2300 1 126 7.0E-35 T 28-03-2018 AL549_RS04445 74c8542e641cfe80658bde3ffd2f6c4d 104 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 99 3.6E-24 T 28-03-2018 IPR008407 Branched-chain amino acid transport, AzlD AL549_RS01750 cb9b7d2d61e9ec84cb57e3169c67b42e 197 SUPERFAMILY SSF46689 3 70 6.31E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS01750 cb9b7d2d61e9ec84cb57e3169c67b42e 197 Gene3D G3DSA:1.10.10.60 6 51 1.2E-10 T 28-03-2018 AL549_RS01750 cb9b7d2d61e9ec84cb57e3169c67b42e 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 53 7.4E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS01750 cb9b7d2d61e9ec84cb57e3169c67b42e 197 SUPERFAMILY SSF48498 81 193 6.95E-21 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL549_RS01750 cb9b7d2d61e9ec84cb57e3169c67b42e 197 Gene3D G3DSA:1.10.357.10 52 197 1.5E-12 T 28-03-2018 AL549_RS06935 017e96679f6d047657cedca891b77b2a 154 Pfam PF04224 Protein of unknown function, DUF417 8 146 2.4E-42 T 28-03-2018 IPR007339 Protein of unknown function DUF417 AL549_RS06935 017e96679f6d047657cedca891b77b2a 154 PIRSF PIRSF028065 1 149 1.4E-81 T 28-03-2018 IPR016865 Inner membrane protein RclC AL549_RS11045 c030dac6548b72b6a2b5edf1367baaf0 257 Pfam PF07103 Protein of unknown function (DUF1365) 9 245 4.3E-68 T 28-03-2018 IPR010775 Protein of unknown function DUF1365 AL549_RS02505 e7350e877f60a6f6bfc40bf8f921ba83 330 Gene3D G3DSA:3.40.50.720 151 264 2.9E-5 T 28-03-2018 AL549_RS02505 e7350e877f60a6f6bfc40bf8f921ba83 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 98 9.7E-7 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL549_RS02505 e7350e877f60a6f6bfc40bf8f921ba83 330 SUPERFAMILY SSF50129 16 153 3.5E-26 T 28-03-2018 IPR011032 GroES-like AL549_RS02505 e7350e877f60a6f6bfc40bf8f921ba83 330 SUPERFAMILY SSF51735 123 289 3.67E-23 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS02505 e7350e877f60a6f6bfc40bf8f921ba83 330 SMART SM00829 18 328 5.6E-7 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL549_RS02505 e7350e877f60a6f6bfc40bf8f921ba83 330 Gene3D G3DSA:3.90.180.10 3 150 1.5E-33 T 28-03-2018 AL549_RS11450 745972a3a78ce06b1d179aa63a3afdce 219 SUPERFAMILY SSF46894 119 217 3.12E-26 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS11450 745972a3a78ce06b1d179aa63a3afdce 219 SMART SM00448 1 112 1.7E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS11450 745972a3a78ce06b1d179aa63a3afdce 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 3.1E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS11450 745972a3a78ce06b1d179aa63a3afdce 219 Gene3D G3DSA:3.40.50.2300 1 119 6.3E-30 T 28-03-2018 AL549_RS11450 745972a3a78ce06b1d179aa63a3afdce 219 Pfam PF00072 Response regulator receiver domain 3 113 3.9E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS11450 745972a3a78ce06b1d179aa63a3afdce 219 SMART SM00862 145 216 3.3E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL549_RS11450 745972a3a78ce06b1d179aa63a3afdce 219 SUPERFAMILY SSF52172 1 133 2.42E-36 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS11450 745972a3a78ce06b1d179aa63a3afdce 219 Gene3D G3DSA:1.10.10.10 120 219 8.1E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS16585 64f2be1cc5da8495a1879eecc7ff967f 334 Gene3D G3DSA:3.40.50.2300 176 313 1.9E-48 T 28-03-2018 AL549_RS16585 64f2be1cc5da8495a1879eecc7ff967f 334 Gene3D G3DSA:1.10.260.40 2 54 2.2E-21 T 28-03-2018 AL549_RS16585 64f2be1cc5da8495a1879eecc7ff967f 334 SUPERFAMILY SSF53822 60 331 2.98E-95 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS16585 64f2be1cc5da8495a1879eecc7ff967f 334 SUPERFAMILY SSF47413 1 59 8.61E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS16585 64f2be1cc5da8495a1879eecc7ff967f 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 62.61 T 28-03-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 AL549_RS16585 64f2be1cc5da8495a1879eecc7ff967f 334 SMART SM00354 1 71 2.9E-38 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS16585 64f2be1cc5da8495a1879eecc7ff967f 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 AL549_RS16585 64f2be1cc5da8495a1879eecc7ff967f 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.8E-21 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS16585 64f2be1cc5da8495a1879eecc7ff967f 334 Gene3D G3DSA:3.40.50.2300 55 175 1.7E-31 T 28-03-2018 AL549_RS16585 64f2be1cc5da8495a1879eecc7ff967f 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 6.3E-45 T 28-03-2018 AL549_RS16585 64f2be1cc5da8495a1879eecc7ff967f 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS16585 64f2be1cc5da8495a1879eecc7ff967f 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS15440 a83d8af5ea6a1bf5465b1c572e5c6a42 217 SUPERFAMILY SSF53335 3 214 6.09E-53 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS15440 a83d8af5ea6a1bf5465b1c572e5c6a42 217 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 213 1.3E-77 T 28-03-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 AL549_RS15440 a83d8af5ea6a1bf5465b1c572e5c6a42 217 Gene3D G3DSA:3.40.50.150 17 216 3.9E-27 T 28-03-2018 AL549_RS15440 a83d8af5ea6a1bf5465b1c572e5c6a42 217 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 35.794 T 28-03-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 AL549_RS15440 a83d8af5ea6a1bf5465b1c572e5c6a42 217 PIRSF PIRSF023956 2 217 8.0E-73 T 28-03-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 AL549_RS15440 a83d8af5ea6a1bf5465b1c572e5c6a42 217 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 215 1.3E-73 T 28-03-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 AL549_RS23120 e651f3df8f75fcb377f25aa66924d9f5 100 Pfam PF00276 Ribosomal protein L23 9 95 1.4E-31 T 28-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AL549_RS23120 e651f3df8f75fcb377f25aa66924d9f5 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 28-03-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23120 e651f3df8f75fcb377f25aa66924d9f5 100 Gene3D G3DSA:3.30.70.330 6 100 7.7E-33 T 28-03-2018 AL549_RS23120 e651f3df8f75fcb377f25aa66924d9f5 100 SUPERFAMILY SSF54189 3 92 3.6E-32 T 28-03-2018 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23120 e651f3df8f75fcb377f25aa66924d9f5 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 28-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AL549_RS23130 e42ef59624df434beee326673e58f593 92 PIRSF PIRSF002144 1 92 3.0E-31 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23130 e42ef59624df434beee326673e58f593 92 Pfam PF00203 Ribosomal protein S19 3 83 3.5E-36 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23130 e42ef59624df434beee326673e58f593 92 SUPERFAMILY SSF54570 3 84 2.62E-35 T 28-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23130 e42ef59624df434beee326673e58f593 92 Gene3D G3DSA:3.30.860.10 1 92 1.2E-40 T 28-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23130 e42ef59624df434beee326673e58f593 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.2E-46 T 28-03-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL549_RS23130 e42ef59624df434beee326673e58f593 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.647 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23130 e42ef59624df434beee326673e58f593 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 7.7E-25 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23130 e42ef59624df434beee326673e58f593 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 7.7E-25 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23130 e42ef59624df434beee326673e58f593 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 7.7E-25 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23130 e42ef59624df434beee326673e58f593 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 28-03-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS21215 cee0305e2caa23656aebb6e65f331949 73 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 73 2.5E-24 T 28-03-2018 IPR019620 Putative metal-binding protein AL549_RS21215 cee0305e2caa23656aebb6e65f331949 73 Pfam PF10678 Protein of unknown function (DUF2492) 2 72 9.2E-24 T 28-03-2018 IPR019620 Putative metal-binding protein AL549_RS01070 11b1db9d39af56fec698c670a6bb158f 403 Pfam PF07690 Major Facilitator Superfamily 20 361 8.7E-25 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS01070 11b1db9d39af56fec698c670a6bb158f 403 SUPERFAMILY SSF103473 13 401 1.57E-44 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS01070 11b1db9d39af56fec698c670a6bb158f 403 Gene3D G3DSA:1.20.1250.20 5 205 8.4E-19 T 28-03-2018 AL549_RS01070 11b1db9d39af56fec698c670a6bb158f 403 Gene3D G3DSA:1.20.1250.20 212 401 4.4E-17 T 28-03-2018 AL549_RS16360 dc365c0006357c6121d8eef9d493d5a5 107 SMART SM00530 16 69 3.0E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL549_RS16360 dc365c0006357c6121d8eef9d493d5a5 107 Pfam PF01381 Helix-turn-helix 17 62 1.2E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL549_RS16360 dc365c0006357c6121d8eef9d493d5a5 107 Gene3D G3DSA:1.10.260.40 2 77 4.2E-15 T 28-03-2018 AL549_RS16360 dc365c0006357c6121d8eef9d493d5a5 107 SUPERFAMILY SSF47413 11 71 8.31E-12 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS10925 e051d92101dbd24ee5591c77d581c444 186 Pfam PF05951 Bacterial protein of unknown function (DUF882) 38 186 3.7E-72 T 28-03-2018 IPR010275 Protein of unknown function DUF882 AL549_RS10925 e051d92101dbd24ee5591c77d581c444 186 Gene3D G3DSA:3.30.1380.10 64 186 2.0E-26 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL549_RS10925 e051d92101dbd24ee5591c77d581c444 186 SUPERFAMILY SSF55166 73 186 2.41E-34 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL549_RS11955 1ead3e391e667a418055d3e0dd8e6865 512 SUPERFAMILY SSF53335 5 512 8.72E-117 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS11955 1ead3e391e667a418055d3e0dd8e6865 512 Pfam PF02384 N-6 DNA Methylase 139 482 5.7E-62 T 28-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AL549_RS11955 1ead3e391e667a418055d3e0dd8e6865 512 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 184 198 2.1E-18 T 28-03-2018 AL549_RS11955 1ead3e391e667a418055d3e0dd8e6865 512 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 160 176 2.1E-18 T 28-03-2018 AL549_RS11955 1ead3e391e667a418055d3e0dd8e6865 512 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 316 340 2.1E-18 T 28-03-2018 AL549_RS11955 1ead3e391e667a418055d3e0dd8e6865 512 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 286 298 2.1E-18 T 28-03-2018 AL549_RS11955 1ead3e391e667a418055d3e0dd8e6865 512 Gene3D G3DSA:3.40.50.150 158 476 1.1E-62 T 28-03-2018 AL549_RS11955 1ead3e391e667a418055d3e0dd8e6865 512 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 289 295 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL549_RS11955 1ead3e391e667a418055d3e0dd8e6865 512 Pfam PF12161 HsdM N-terminal domain 6 130 2.8E-14 T 28-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AL549_RS07370 67b93efffb68875c226211b9fbed472a 950 Gene3D G3DSA:1.20.120.330 288 443 6.4E-48 T 28-03-2018 AL549_RS07370 67b93efffb68875c226211b9fbed472a 950 Pfam PF08335 GlnD PII-uridylyltransferase 828 914 7.1E-7 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AL549_RS07370 67b93efffb68875c226211b9fbed472a 950 Pfam PF08335 GlnD PII-uridylyltransferase 300 438 4.1E-45 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AL549_RS07370 67b93efffb68875c226211b9fbed472a 950 SUPERFAMILY SSF81593 818 945 1.49E-31 T 28-03-2018 AL549_RS07370 67b93efffb68875c226211b9fbed472a 950 Gene3D G3DSA:1.10.4050.10 531 639 8.1E-24 T 28-03-2018 AL549_RS07370 67b93efffb68875c226211b9fbed472a 950 Gene3D G3DSA:1.10.4050.10 11 112 9.6E-11 T 28-03-2018 AL549_RS07370 67b93efffb68875c226211b9fbed472a 950 Gene3D G3DSA:1.20.120.330 814 948 6.4E-34 T 28-03-2018 AL549_RS07370 67b93efffb68875c226211b9fbed472a 950 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 555 807 2.8E-100 T 28-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AL549_RS07370 67b93efffb68875c226211b9fbed472a 950 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 279 9.0E-92 T 28-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AL549_RS07370 67b93efffb68875c226211b9fbed472a 950 SUPERFAMILY SSF81301 24 289 1.68E-86 T 28-03-2018 AL549_RS07370 67b93efffb68875c226211b9fbed472a 950 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 30 947 19.766 T 28-03-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 AL549_RS07370 67b93efffb68875c226211b9fbed472a 950 SUPERFAMILY SSF81301 527 817 4.9E-92 T 28-03-2018 AL549_RS07370 67b93efffb68875c226211b9fbed472a 950 SUPERFAMILY SSF81593 290 439 4.55E-43 T 28-03-2018 AL549_RS07370 67b93efffb68875c226211b9fbed472a 950 Gene3D G3DSA:3.30.460.10 114 287 8.9E-58 T 28-03-2018 AL549_RS07370 67b93efffb68875c226211b9fbed472a 950 Gene3D G3DSA:3.30.460.10 640 813 2.2E-59 T 28-03-2018 AL549_RS10820 0f67260f66722c2c51bdd61a3b638971 247 Gene3D G3DSA:3.40.50.720 2 245 4.1E-59 T 28-03-2018 AL549_RS10820 0f67260f66722c2c51bdd61a3b638971 247 Pfam PF00106 short chain dehydrogenase 13 208 5.8E-53 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS10820 0f67260f66722c2c51bdd61a3b638971 247 SUPERFAMILY SSF51735 9 242 1.01E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS10820 0f67260f66722c2c51bdd61a3b638971 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL549_RS10820 0f67260f66722c2c51bdd61a3b638971 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 1.0E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS10820 0f67260f66722c2c51bdd61a3b638971 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 1.0E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS10820 0f67260f66722c2c51bdd61a3b638971 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 1.0E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS10820 0f67260f66722c2c51bdd61a3b638971 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 178 0.0061 T 28-03-2018 AL549_RS10820 0f67260f66722c2c51bdd61a3b638971 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 4.6E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS10820 0f67260f66722c2c51bdd61a3b638971 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 4.6E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS10820 0f67260f66722c2c51bdd61a3b638971 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 4.6E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS10820 0f67260f66722c2c51bdd61a3b638971 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 4.6E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS10820 0f67260f66722c2c51bdd61a3b638971 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 4.6E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04400 c1ca78570b71bb111a1fb109b6e95f86 201 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 28-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AL549_RS04400 c1ca78570b71bb111a1fb109b6e95f86 201 PRINTS PR00160 Glutaredoxin signature 157 170 6.1E-8 T 28-03-2018 IPR014025 Glutaredoxin subgroup AL549_RS04400 c1ca78570b71bb111a1fb109b6e95f86 201 PRINTS PR00160 Glutaredoxin signature 171 184 6.1E-8 T 28-03-2018 IPR014025 Glutaredoxin subgroup AL549_RS04400 c1ca78570b71bb111a1fb109b6e95f86 201 PRINTS PR00160 Glutaredoxin signature 108 126 6.1E-8 T 28-03-2018 IPR014025 Glutaredoxin subgroup AL549_RS04400 c1ca78570b71bb111a1fb109b6e95f86 201 SUPERFAMILY SSF52833 109 189 2.44E-17 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS04400 c1ca78570b71bb111a1fb109b6e95f86 201 Gene3D G3DSA:3.40.30.10 109 185 4.3E-19 T 28-03-2018 AL549_RS04400 c1ca78570b71bb111a1fb109b6e95f86 201 Pfam PF00462 Glutaredoxin 109 174 2.1E-15 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL549_RS15385 83d57066ecf9f822b6348117cfed5bdb 241 Gene3D G3DSA:3.10.129.10 8 210 2.2E-4 T 28-03-2018 AL549_RS15385 83d57066ecf9f822b6348117cfed5bdb 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 1.5E-98 T 28-03-2018 IPR021974 Protein of unknown function DUF3581 AL549_RS10660 b31b570af702911ec6f4efed5c888bdc 196 PIRSF PIRSF015617 2 196 4.6E-65 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AL549_RS10660 b31b570af702911ec6f4efed5c888bdc 196 SUPERFAMILY SSF52540 8 196 4.21E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS10660 b31b570af702911ec6f4efed5c888bdc 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 27 196 2.5E-58 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AL549_RS10660 b31b570af702911ec6f4efed5c888bdc 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 8.2E-69 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AL549_RS10660 b31b570af702911ec6f4efed5c888bdc 196 Gene3D G3DSA:3.40.50.300 6 196 1.0E-68 T 28-03-2018 AL549_RS00225 ab484550318bdbfd82c11973547f9b4b 287 SUPERFAMILY SSF161098 24 274 4.02E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS00225 ab484550318bdbfd82c11973547f9b4b 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 3.4E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS00225 ab484550318bdbfd82c11973547f9b4b 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 14 283 4.9E-99 T 28-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AL549_RS00225 ab484550318bdbfd82c11973547f9b4b 287 Gene3D G3DSA:1.10.3720.10 6 281 1.9E-43 T 28-03-2018 AL549_RS16975 b0ea1dc54f72ac7912af1840f0baef99 211 Gene3D G3DSA:1.10.357.20 34 207 1.1E-37 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL549_RS16975 b0ea1dc54f72ac7912af1840f0baef99 211 Pfam PF01769 Divalent cation transporter 79 198 9.8E-28 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL549_RS16975 b0ea1dc54f72ac7912af1840f0baef99 211 SUPERFAMILY SSF161093 36 205 2.09E-48 T 28-03-2018 AL549_RS05115 c0f55695b496623a208284b6aeed977c 322 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 11 307 6.0E-60 T 28-03-2018 IPR010732 Type VI secretion, TssG-like AL549_RS05115 c0f55695b496623a208284b6aeed977c 322 Pfam PF06996 Type VI secretion, TssG 12 307 6.1E-66 T 28-03-2018 IPR010732 Type VI secretion, TssG-like AL549_RS01190 85038a33dcbb0d19e0b5e582d28c67f9 383 Gene3D G3DSA:3.50.50.60 249 310 3.0E-6 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS01190 85038a33dcbb0d19e0b5e582d28c67f9 383 Gene3D G3DSA:3.50.50.60 3 118 9.4E-13 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS01190 85038a33dcbb0d19e0b5e582d28c67f9 383 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 2.8E-21 T 28-03-2018 AL549_RS01190 85038a33dcbb0d19e0b5e582d28c67f9 383 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 2.8E-21 T 28-03-2018 AL549_RS01190 85038a33dcbb0d19e0b5e582d28c67f9 383 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 2.8E-21 T 28-03-2018 AL549_RS01190 85038a33dcbb0d19e0b5e582d28c67f9 383 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.8E-21 T 28-03-2018 AL549_RS01190 85038a33dcbb0d19e0b5e582d28c67f9 383 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 2.8E-21 T 28-03-2018 AL549_RS01190 85038a33dcbb0d19e0b5e582d28c67f9 383 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 278 1.2E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS01190 85038a33dcbb0d19e0b5e582d28c67f9 383 Gene3D G3DSA:3.50.50.60 119 248 1.5E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS01190 85038a33dcbb0d19e0b5e582d28c67f9 383 Hamap MF_01313 Nitric oxide reductase FlRd-NAD(+) reductase [norW]. 2 379 55.726 T 28-03-2018 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase GO:0016731|GO:0055114 AL549_RS01190 85038a33dcbb0d19e0b5e582d28c67f9 383 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 1.9E-14 T 28-03-2018 AL549_RS01190 85038a33dcbb0d19e0b5e582d28c67f9 383 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 1.9E-14 T 28-03-2018 AL549_RS01190 85038a33dcbb0d19e0b5e582d28c67f9 383 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.9E-14 T 28-03-2018 AL549_RS01190 85038a33dcbb0d19e0b5e582d28c67f9 383 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 1.9E-14 T 28-03-2018 AL549_RS01190 85038a33dcbb0d19e0b5e582d28c67f9 383 SUPERFAMILY SSF51905 6 305 5.32E-37 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05795 81c8bce3ba850f9f9afd90706de79242 551 Gene3D G3DSA:3.40.50.300 98 435 6.8E-9 T 28-03-2018 AL549_RS05795 81c8bce3ba850f9f9afd90706de79242 551 Pfam PF09818 Predicted ATPase of the ABC class 2 433 3.5E-180 T 28-03-2018 IPR019195 ABC transporter, ATPase, putative AL549_RS05795 81c8bce3ba850f9f9afd90706de79242 551 SUPERFAMILY SSF52540 227 407 4.93E-7 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS08620 9156c985172a1bb387f0d9b59ac46ca2 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 89.763 T 28-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AL549_RS08620 9156c985172a1bb387f0d9b59ac46ca2 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 5.1E-73 T 28-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AL549_RS08620 9156c985172a1bb387f0d9b59ac46ca2 149 Pfam PF03477 ATP cone domain 50 136 2.3E-16 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AL549_RS12300 5ea7967f3557b33343ecaff0ae96c3a6 272 Gene3D G3DSA:3.40.190.10 25 124 0.056 T 28-03-2018 AL549_RS12300 5ea7967f3557b33343ecaff0ae96c3a6 272 Gene3D G3DSA:3.40.190.10 125 255 3.7E-16 T 28-03-2018 AL549_RS12300 5ea7967f3557b33343ecaff0ae96c3a6 272 SUPERFAMILY SSF53850 25 231 6.16E-19 T 28-03-2018 AL549_RS12300 5ea7967f3557b33343ecaff0ae96c3a6 272 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 29 259 3.8E-52 T 28-03-2018 AL549_RS22095 70191408e10f5144b78f270d408fc114 257 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.256 T 28-03-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AL549_RS22095 70191408e10f5144b78f270d408fc114 257 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 5.0E-112 T 28-03-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AL549_RS22095 70191408e10f5144b78f270d408fc114 257 SUPERFAMILY SSF110399 1 236 4.58E-87 T 28-03-2018 AL549_RS22095 70191408e10f5144b78f270d408fc114 257 Gene3D G3DSA:3.20.20.70 1 256 6.3E-54 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS02425 d71139605329e4a84e6c496d8ecd4195 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 422 1.4E-115 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL549_RS02425 d71139605329e4a84e6c496d8ecd4195 433 PIRSF PIRSF006066 4 433 7.8E-168 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL549_RS02425 d71139605329e4a84e6c496d8ecd4195 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 427 4.4E-138 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL549_RS11025 9effa1a6e912e492fae10fe6ec62321e 288 Hamap MF_00188 Protease HtpX [htpX]. 1 288 25.464 T 28-03-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 AL549_RS11025 9effa1a6e912e492fae10fe6ec62321e 288 Gene3D G3DSA:3.30.2010.10 68 161 2.8E-21 T 28-03-2018 AL549_RS11025 9effa1a6e912e492fae10fe6ec62321e 288 Pfam PF01435 Peptidase family M48 78 287 9.6E-40 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL549_RS07030 ca7f110f65895793424affbc3315c376 300 SUPERFAMILY SSF103481 201 298 2.09E-8 T 28-03-2018 AL549_RS07030 ca7f110f65895793424affbc3315c376 300 SUPERFAMILY SSF103481 41 137 3.79E-9 T 28-03-2018 AL549_RS07030 ca7f110f65895793424affbc3315c376 300 Pfam PF00892 EamA-like transporter family 153 300 1.9E-6 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS07030 ca7f110f65895793424affbc3315c376 300 Pfam PF00892 EamA-like transporter family 5 136 3.5E-9 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS07030 ca7f110f65895793424affbc3315c376 300 TIGRFAM TIGR03340 phn_DUF6: phosphonate utilization associated putative membrane protein 4 297 5.4E-123 T 28-03-2018 IPR017725 Phosphonate utilization associated transmembrane protein, putative AL549_RS19410 5063f5ab59cdb1ac5257b50175229d25 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.663 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AL549_RS19410 5063f5ab59cdb1ac5257b50175229d25 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 7.4E-73 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AL549_RS19410 5063f5ab59cdb1ac5257b50175229d25 272 Gene3D G3DSA:1.10.3730.10 166 272 5.6E-32 T 28-03-2018 AL549_RS19410 5063f5ab59cdb1ac5257b50175229d25 272 Gene3D G3DSA:3.40.50.720 1 165 5.4E-25 T 28-03-2018 AL549_RS19410 5063f5ab59cdb1ac5257b50175229d25 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AL549_RS19410 5063f5ab59cdb1ac5257b50175229d25 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 99 6.1E-25 T 28-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AL549_RS19410 5063f5ab59cdb1ac5257b50175229d25 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 6.6E-30 T 28-03-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AL549_RS19410 5063f5ab59cdb1ac5257b50175229d25 272 SUPERFAMILY SSF51735 4 161 9.4E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS19410 5063f5ab59cdb1ac5257b50175229d25 272 PIRSF PIRSF000193 3 270 1.3E-75 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AL549_RS19410 5063f5ab59cdb1ac5257b50175229d25 272 SUPERFAMILY SSF48179 162 270 1.07E-30 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL549_RS20090 16bec5c746d63037086bc4b6f7de01a3 172 Gene3D G3DSA:3.40.50.300 1 172 5.3E-35 T 28-03-2018 AL549_RS20090 16bec5c746d63037086bc4b6f7de01a3 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.411 T 28-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL549_RS20090 16bec5c746d63037086bc4b6f7de01a3 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 28-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL549_RS20090 16bec5c746d63037086bc4b6f7de01a3 172 SUPERFAMILY SSF52540 4 169 4.26E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20090 16bec5c746d63037086bc4b6f7de01a3 172 Pfam PF01202 Shikimate kinase 13 169 2.6E-56 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL549_RS20090 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 7 22 5.2E-29 T 28-03-2018 AL549_RS20090 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 77 86 5.2E-29 T 28-03-2018 AL549_RS20090 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 31 44 5.2E-29 T 28-03-2018 AL549_RS20090 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 98 115 5.2E-29 T 28-03-2018 AL549_RS20090 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 59 67 5.2E-29 T 28-03-2018 AL549_RS18815 f616ea71206e1830dc6d9336140e6b9f 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 9.7E-5 T 28-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AL549_RS18815 f616ea71206e1830dc6d9336140e6b9f 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 9.7E-5 T 28-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AL549_RS18815 f616ea71206e1830dc6d9336140e6b9f 148 SUPERFAMILY SSF57716 108 146 5.84E-10 T 28-03-2018 AL549_RS18815 f616ea71206e1830dc6d9336140e6b9f 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 30.218 T 28-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AL549_RS18815 f616ea71206e1830dc6d9336140e6b9f 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 28-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AL549_RS18815 f616ea71206e1830dc6d9336140e6b9f 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 9.9E-52 T 28-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AL549_RS18815 f616ea71206e1830dc6d9336140e6b9f 148 SUPERFAMILY SSF109635 7 107 3.01E-37 T 28-03-2018 AL549_RS18815 f616ea71206e1830dc6d9336140e6b9f 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 3.0E-10 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AL549_RS03215 8df908fec657776435b860d102d7ee29 211 Pfam PF02502 Ribose/Galactose Isomerase 3 136 6.6E-28 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AL549_RS03215 8df908fec657776435b860d102d7ee29 211 Pfam PF12408 Ribose-5-phosphate isomerase 163 209 7.2E-23 T 28-03-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal AL549_RS03215 8df908fec657776435b860d102d7ee29 211 SUPERFAMILY SSF89623 1 160 6.8E-35 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AL549_RS03215 8df908fec657776435b860d102d7ee29 211 Gene3D G3DSA:3.40.1400.10 1 211 6.9E-56 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AL549_RS16530 19cfbbb21e54c00d7a6515f7cdf99e2c 330 Pfam PF14397 Sugar-transfer associated ATP-grasp 25 298 7.5E-115 T 28-03-2018 AL549_RS16530 19cfbbb21e54c00d7a6515f7cdf99e2c 330 SUPERFAMILY SSF56059 46 205 4.04E-20 T 28-03-2018 AL549_RS16530 19cfbbb21e54c00d7a6515f7cdf99e2c 330 SUPERFAMILY SSF56059 235 283 4.04E-20 T 28-03-2018 AL549_RS16530 19cfbbb21e54c00d7a6515f7cdf99e2c 330 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 8 323 3.0E-170 T 28-03-2018 IPR011758 Alpha-L-glutamate ligase-related protein AL549_RS16530 19cfbbb21e54c00d7a6515f7cdf99e2c 330 Gene3D G3DSA:3.30.1490.20 39 147 4.4E-8 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL549_RS16530 19cfbbb21e54c00d7a6515f7cdf99e2c 330 Gene3D G3DSA:3.30.470.20 148 289 2.8E-19 T 28-03-2018 AL549_RS08480 e0f883800c5bc9bace718de85f77e2dd 299 Pfam PF01297 Zinc-uptake complex component A periplasmic 31 289 1.7E-19 T 28-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AL549_RS08480 e0f883800c5bc9bace718de85f77e2dd 299 Gene3D G3DSA:3.40.50.1980 22 182 2.1E-22 T 28-03-2018 AL549_RS08480 e0f883800c5bc9bace718de85f77e2dd 299 SUPERFAMILY SSF53807 13 293 1.57E-50 T 28-03-2018 AL549_RS08480 e0f883800c5bc9bace718de85f77e2dd 299 Gene3D G3DSA:3.40.50.1980 183 294 1.4E-7 T 28-03-2018 AL549_RS09920 b705e8e57f91bd1311e2fb2e6dedbc1a 329 SUPERFAMILY SSF54826 1 101 2.55E-25 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS09920 b705e8e57f91bd1311e2fb2e6dedbc1a 329 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 321 23.095 T 28-03-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS09920 b705e8e57f91bd1311e2fb2e6dedbc1a 329 SUPERFAMILY SSF51604 103 316 2.36E-49 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL549_RS09920 b705e8e57f91bd1311e2fb2e6dedbc1a 329 Gene3D G3DSA:3.20.20.120 113 301 6.6E-33 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL549_RS09920 b705e8e57f91bd1311e2fb2e6dedbc1a 329 Pfam PF13378 Enolase C-terminal domain-like 126 278 5.6E-12 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AL549_RS09920 b705e8e57f91bd1311e2fb2e6dedbc1a 329 Gene3D G3DSA:3.30.390.10 1 112 3.1E-14 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL549_RS09920 b705e8e57f91bd1311e2fb2e6dedbc1a 329 SMART SM00922 117 214 1.8E-6 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AL549_RS09920 b705e8e57f91bd1311e2fb2e6dedbc1a 329 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 312 3.6E-108 T 28-03-2018 AL549_RS09125 0752662846074612c3ff241c5eb63189 141 SUPERFAMILY SSF140566 1 113 3.53E-20 T 28-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AL549_RS09125 0752662846074612c3ff241c5eb63189 141 Gene3D G3DSA:1.20.58.300 1 113 1.8E-13 T 28-03-2018 AL549_RS09125 0752662846074612c3ff241c5eb63189 141 Pfam PF05130 FlgN protein 2 131 7.3E-25 T 28-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AL549_RS07620 68ba8cace1b4974d7c124fed945d8d82 281 Gene3D G3DSA:1.10.10.10 1 78 3.7E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS07620 68ba8cace1b4974d7c124fed945d8d82 281 SUPERFAMILY SSF53850 90 279 6.33E-17 T 28-03-2018 AL549_RS07620 68ba8cace1b4974d7c124fed945d8d82 281 Gene3D G3DSA:3.40.190.10 86 266 3.4E-7 T 28-03-2018 AL549_RS07620 68ba8cace1b4974d7c124fed945d8d82 281 Pfam PF03466 LysR substrate binding domain 90 276 4.9E-12 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS07620 68ba8cace1b4974d7c124fed945d8d82 281 SUPERFAMILY SSF46785 3 77 2.72E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS07620 68ba8cace1b4974d7c124fed945d8d82 281 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.1E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS08545 eaa6ecc73a224e568959a8c675c5371c 181 Gene3D G3DSA:3.40.140.10 3 165 8.2E-50 T 28-03-2018 AL549_RS08545 eaa6ecc73a224e568959a8c675c5371c 181 SUPERFAMILY SSF53927 9 161 3.35E-55 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL549_RS08545 eaa6ecc73a224e568959a8c675c5371c 181 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 16 157 44.469 T 28-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AL549_RS08545 eaa6ecc73a224e568959a8c675c5371c 181 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 98 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL549_RS08545 eaa6ecc73a224e568959a8c675c5371c 181 Pfam PF14437 MafB19-like deaminase 12 157 4.3E-31 T 28-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AL549_RS23390 c61b7a0696d25b83c6e46321373421d5 335 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 26 329 2.0E-143 T 28-03-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030288|GO:0030975 AL549_RS23390 c61b7a0696d25b83c6e46321373421d5 335 SUPERFAMILY SSF53850 29 330 4.76E-66 T 28-03-2018 AL549_RS23390 c61b7a0696d25b83c6e46321373421d5 335 Pfam PF13343 Bacterial extracellular solute-binding protein 81 297 2.6E-20 T 28-03-2018 AL549_RS23390 c61b7a0696d25b83c6e46321373421d5 335 Gene3D G3DSA:3.40.190.10 141 282 5.9E-29 T 28-03-2018 AL549_RS23390 c61b7a0696d25b83c6e46321373421d5 335 Gene3D G3DSA:3.40.190.10 24 140 1.0E-5 T 28-03-2018 AL549_RS23390 c61b7a0696d25b83c6e46321373421d5 335 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 19 334 5.7E-149 T 28-03-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 AL549_RS00230 831a9032170f21c7aa5ec2b4d436d214 310 SUPERFAMILY SSF161098 35 304 1.31E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS00230 831a9032170f21c7aa5ec2b4d436d214 310 Gene3D G3DSA:1.10.3720.10 23 302 7.8E-36 T 28-03-2018 AL549_RS00230 831a9032170f21c7aa5ec2b4d436d214 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 306 3.4E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS00230 831a9032170f21c7aa5ec2b4d436d214 310 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 33 307 1.1E-91 T 28-03-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AL549_RS04185 93598cf8f2092a4d0ac08beb1774528f 183 Gene3D G3DSA:2.40.160.20 23 183 8.3E-13 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS04185 93598cf8f2092a4d0ac08beb1774528f 183 SUPERFAMILY SSF56925 29 183 5.89E-14 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS04185 93598cf8f2092a4d0ac08beb1774528f 183 Pfam PF13505 Outer membrane protein beta-barrel domain 8 183 1.7E-9 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel AL549_RS07925 63219f1a8bf43d36efdea6ead4f0a678 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 2.6E-21 T 28-03-2018 IPR025299 CstA, C-terminal domain AL549_RS07925 63219f1a8bf43d36efdea6ead4f0a678 494 Pfam PF02554 Carbon starvation protein CstA 4 144 2.4E-33 T 28-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AL549_RS07925 63219f1a8bf43d36efdea6ead4f0a678 494 Pfam PF02554 Carbon starvation protein CstA 148 293 2.7E-20 T 28-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AL549_RS17525 01b8662458cd39ea5621531dfab606e6 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.5E-42 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL549_RS17525 01b8662458cd39ea5621531dfab606e6 376 Gene3D G3DSA:1.20.1330.10 40 348 2.3E-69 T 28-03-2018 AL549_RS17525 01b8662458cd39ea5621531dfab606e6 376 PRINTS PR00207 Flagellin signature 37 54 3.4E-26 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL549_RS17525 01b8662458cd39ea5621531dfab606e6 376 PRINTS PR00207 Flagellin signature 76 95 3.4E-26 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL549_RS17525 01b8662458cd39ea5621531dfab606e6 376 PRINTS PR00207 Flagellin signature 111 134 3.4E-26 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL549_RS17525 01b8662458cd39ea5621531dfab606e6 376 SUPERFAMILY SSF64518 1 375 5.23E-96 T 28-03-2018 AL549_RS17525 01b8662458cd39ea5621531dfab606e6 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 4.3E-26 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL549_RS17525 01b8662458cd39ea5621531dfab606e6 376 Pfam PF07196 Flagellin hook IN motif 193 248 1.3E-11 T 28-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL549_RS09315 7467808bb6670b6a97c1215e145a9cb8 185 SUPERFAMILY SSF56300 4 165 5.38E-36 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS09315 7467808bb6670b6a97c1215e145a9cb8 185 Gene3D G3DSA:3.60.21.10 2 174 4.6E-28 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS09315 7467808bb6670b6a97c1215e145a9cb8 185 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 4 164 3.8E-26 T 28-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 AL549_RS09315 7467808bb6670b6a97c1215e145a9cb8 185 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 4 171 2.3E-33 T 28-03-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 AL549_RS23430 441a80e334bb34d8555e23d689b4d13e 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 147 8.4E-39 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AL549_RS23430 441a80e334bb34d8555e23d689b4d13e 148 SUPERFAMILY SSF55804 1 147 3.79E-42 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS23430 441a80e334bb34d8555e23d689b4d13e 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 147 4.2E-53 T 28-03-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 AL549_RS23430 441a80e334bb34d8555e23d689b4d13e 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain AL549_RS23430 441a80e334bb34d8555e23d689b4d13e 148 Gene3D G3DSA:3.40.930.10 1 148 6.2E-40 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS17965 78c0df4e20483277102780588ef2ee36 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 333 1.7E-10 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS17965 78c0df4e20483277102780588ef2ee36 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.7E-10 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS17965 78c0df4e20483277102780588ef2ee36 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.7E-10 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS17965 78c0df4e20483277102780588ef2ee36 454 SUPERFAMILY SSF161070 10 453 1.83E-118 T 28-03-2018 AL549_RS17965 78c0df4e20483277102780588ef2ee36 454 Pfam PF00209 Sodium:neurotransmitter symporter family 156 452 1.2E-25 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS17965 78c0df4e20483277102780588ef2ee36 454 Pfam PF00209 Sodium:neurotransmitter symporter family 10 138 2.0E-21 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 9.4E-17 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 SUPERFAMILY SSF52540 6 219 3.86E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 Gene3D G3DSA:2.40.30.10 206 299 7.2E-31 T 28-03-2018 AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 4.5E-33 T 28-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 6.4E-14 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 Gene3D G3DSA:3.40.50.300 75 203 1.7E-31 T 28-03-2018 AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 3.5E-231 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 7.0E-58 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.0E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.0E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.0E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.0E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.0E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 SUPERFAMILY SSF50465 298 393 2.19E-35 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 SUPERFAMILY SSF50447 205 301 5.11E-30 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.588 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 Gene3D G3DSA:2.40.30.10 300 393 3.1E-33 T 28-03-2018 AL549_RS20985 9df59776cb72a4f0154b07ab0deea014 394 Gene3D G3DSA:3.40.50.300 2 74 1.8E-11 T 28-03-2018 AL549_RS16705 2824ca3d3b65543457255727d7e41526 181 Pfam PF07445 Primosomal replication protein priC 5 178 1.2E-50 T 28-03-2018 IPR010890 Primosomal replication PriB/PriC AL549_RS23350 27956b76b8bd1e20dcd6ffd9740f32b6 571 Pfam PF01103 Surface antigen 275 568 1.5E-29 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AL549_RS23350 27956b76b8bd1e20dcd6ffd9740f32b6 571 Pfam PF07244 Surface antigen variable number repeat 106 178 4.7E-5 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL549_RS23350 27956b76b8bd1e20dcd6ffd9740f32b6 571 Gene3D G3DSA:2.40.160.50 217 570 1.9E-57 T 28-03-2018 AL549_RS23350 27956b76b8bd1e20dcd6ffd9740f32b6 571 Gene3D G3DSA:3.10.20.310 25 97 0.066 T 28-03-2018 AL549_RS23350 27956b76b8bd1e20dcd6ffd9740f32b6 571 Gene3D G3DSA:3.10.20.310 98 185 1.3E-15 T 28-03-2018 AL549_RS23350 27956b76b8bd1e20dcd6ffd9740f32b6 571 Pfam PF17243 POTRA domain TamA domain 1 26 95 7.9E-18 T 28-03-2018 IPR035243 TamA, POTRA domain 1 AL549_RS20520 dcfc47cf1f561390d85af82aaa3c36cb 373 Gene3D G3DSA:3.30.70.20 196 351 1.5E-11 T 28-03-2018 AL549_RS20520 dcfc47cf1f561390d85af82aaa3c36cb 373 Pfam PF13484 4Fe-4S double cluster binding domain 189 252 2.2E-19 T 28-03-2018 AL549_RS20520 dcfc47cf1f561390d85af82aaa3c36cb 373 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS20520 dcfc47cf1f561390d85af82aaa3c36cb 373 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 49.754 T 28-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AL549_RS20520 dcfc47cf1f561390d85af82aaa3c36cb 373 SUPERFAMILY SSF54862 165 316 9.21E-19 T 28-03-2018 AL549_RS20520 dcfc47cf1f561390d85af82aaa3c36cb 373 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 343 2.5E-151 T 28-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AL549_RS20520 dcfc47cf1f561390d85af82aaa3c36cb 373 Gene3D G3DSA:3.30.70.20 107 195 3.0E-4 T 28-03-2018 AL549_RS20520 dcfc47cf1f561390d85af82aaa3c36cb 373 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 8.4E-25 T 28-03-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 AL549_RS17270 d7e317b23fc2e7ee444f9c5828354d56 925 SUPERFAMILY SSF63411 4 226 2.75E-60 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL549_RS17270 d7e317b23fc2e7ee444f9c5828354d56 925 Gene3D G3DSA:3.30.830.10 1 228 1.2E-80 T 28-03-2018 AL549_RS17270 d7e317b23fc2e7ee444f9c5828354d56 925 Gene3D G3DSA:3.30.830.10 231 457 4.9E-71 T 28-03-2018 AL549_RS17270 d7e317b23fc2e7ee444f9c5828354d56 925 SUPERFAMILY SSF63411 470 693 3.84E-59 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL549_RS17270 d7e317b23fc2e7ee444f9c5828354d56 925 Gene3D G3DSA:3.30.830.10 469 691 2.2E-33 T 28-03-2018 AL549_RS17270 d7e317b23fc2e7ee444f9c5828354d56 925 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 1.4E-36 T 28-03-2018 IPR011765 Peptidase M16, N-terminal AL549_RS17270 d7e317b23fc2e7ee444f9c5828354d56 925 Pfam PF05193 Peptidase M16 inactive domain 182 358 2.0E-24 T 28-03-2018 IPR007863 Peptidase M16, C-terminal AL549_RS17270 d7e317b23fc2e7ee444f9c5828354d56 925 Pfam PF05193 Peptidase M16 inactive domain 648 823 1.5E-9 T 28-03-2018 IPR007863 Peptidase M16, C-terminal AL549_RS17270 d7e317b23fc2e7ee444f9c5828354d56 925 SUPERFAMILY SSF63411 232 468 4.25E-78 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL549_RS17270 d7e317b23fc2e7ee444f9c5828354d56 925 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 28-03-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AL549_RS17270 d7e317b23fc2e7ee444f9c5828354d56 925 Gene3D G3DSA:3.30.830.10 692 918 1.0E-29 T 28-03-2018 AL549_RS17270 d7e317b23fc2e7ee444f9c5828354d56 925 Pfam PF16187 Middle or third domain of peptidase_M16 366 643 6.1E-81 T 28-03-2018 IPR032632 Peptidase M16, middle/third domain AL549_RS17270 d7e317b23fc2e7ee444f9c5828354d56 925 SUPERFAMILY SSF63411 703 909 6.46E-44 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL549_RS12665 0f0f4cbea699b06b1294842c2346e321 152 Pfam PF11749 Protein of unknown function (DUF3305) 45 142 4.9E-22 T 28-03-2018 IPR021736 Protein of unknown function DUF3305 AL549_RS23415 da4af75c0d4f5a2533f6810c14479924 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 451 8.4E-88 T 28-03-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AL549_RS23415 da4af75c0d4f5a2533f6810c14479924 451 Pfam PF01769 Divalent cation transporter 323 444 1.1E-22 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL549_RS23415 da4af75c0d4f5a2533f6810c14479924 451 SUPERFAMILY SSF54631 138 278 1.15E-25 T 28-03-2018 AL549_RS23415 da4af75c0d4f5a2533f6810c14479924 451 Pfam PF03448 MgtE intracellular N domain 36 137 5.5E-26 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL549_RS23415 da4af75c0d4f5a2533f6810c14479924 451 SUPERFAMILY SSF158791 12 136 1.18E-29 T 28-03-2018 AL549_RS23415 da4af75c0d4f5a2533f6810c14479924 451 SUPERFAMILY SSF161093 280 450 2.48E-43 T 28-03-2018 AL549_RS23415 da4af75c0d4f5a2533f6810c14479924 451 Gene3D G3DSA:1.25.60.10 4 134 4.8E-22 T 28-03-2018 AL549_RS23415 da4af75c0d4f5a2533f6810c14479924 451 Gene3D G3DSA:1.10.357.20 279 451 2.1E-31 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL549_RS23415 da4af75c0d4f5a2533f6810c14479924 451 SMART SM00924 36 139 2.8E-36 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL549_RS23415 da4af75c0d4f5a2533f6810c14479924 451 Pfam PF00571 CBS domain 217 257 9.1E-4 T 28-03-2018 IPR000644 CBS domain AL549_RS23415 da4af75c0d4f5a2533f6810c14479924 451 Pfam PF00571 CBS domain 140 189 0.0014 T 28-03-2018 IPR000644 CBS domain AL549_RS23415 da4af75c0d4f5a2533f6810c14479924 451 Gene3D G3DSA:3.10.580.10 135 262 2.4E-15 T 28-03-2018 AL549_RS23415 da4af75c0d4f5a2533f6810c14479924 451 SMART SM00116 146 199 73.0 T 28-03-2018 IPR000644 CBS domain AL549_RS23415 da4af75c0d4f5a2533f6810c14479924 451 SMART SM00116 212 258 0.029 T 28-03-2018 IPR000644 CBS domain AL549_RS10695 af56a5ec7b286a77c066be53ae815faa 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.0E-19 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS10695 af56a5ec7b286a77c066be53ae815faa 56 SUPERFAMILY SSF57829 2 55 1.16E-17 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AL549_RS10695 af56a5ec7b286a77c066be53ae815faa 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.755 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS10695 af56a5ec7b286a77c066be53ae815faa 56 Pfam PF01783 Ribosomal L32p protein family 2 56 2.4E-19 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS14555 409c4fbd0ce649f740a4871f6b680055 154 SUPERFAMILY SSF88697 4 153 1.34E-52 T 28-03-2018 IPR015947 PUA-like domain AL549_RS14555 409c4fbd0ce649f740a4871f6b680055 154 PIRSF PIRSF021320 2 154 1.9E-42 T 28-03-2018 IPR009326 Protein of unknown function DUF984 AL549_RS14555 409c4fbd0ce649f740a4871f6b680055 154 Gene3D G3DSA:3.10.400.10 7 153 1.4E-53 T 28-03-2018 AL549_RS14555 409c4fbd0ce649f740a4871f6b680055 154 SMART SM01022 30 153 2.2E-41 T 28-03-2018 IPR007374 ASCH domain AL549_RS14555 409c4fbd0ce649f740a4871f6b680055 154 Pfam PF04266 ASCH domain 42 153 2.3E-24 T 28-03-2018 IPR007374 ASCH domain AL549_RS16775 cc3046027109f8b311c07d38279db41b 246 Pfam PF04055 Radical SAM superfamily 24 178 7.4E-32 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS16775 cc3046027109f8b311c07d38279db41b 246 Pfam PF13353 4Fe-4S single cluster domain 16 137 3.4E-20 T 28-03-2018 AL549_RS16775 cc3046027109f8b311c07d38279db41b 246 SUPERFAMILY SSF102114 23 220 2.35E-29 T 28-03-2018 AL549_RS16775 cc3046027109f8b311c07d38279db41b 246 PIRSF PIRSF000371 2 47 1.0E-10 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AL549_RS16775 cc3046027109f8b311c07d38279db41b 246 PIRSF PIRSF000371 44 244 1.6E-44 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AL549_RS16775 cc3046027109f8b311c07d38279db41b 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.6E-107 T 28-03-2018 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 AL549_RS16775 cc3046027109f8b311c07d38279db41b 246 Gene3D G3DSA:3.80.30.10 68 246 2.9E-41 T 28-03-2018 AL549_RS16775 cc3046027109f8b311c07d38279db41b 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 28-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AL549_RS05880 fb276f1c68bcb28cd57d55b74e8b6a7f 121 Pfam PF12680 SnoaL-like domain 13 116 1.7E-7 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL549_RS05880 fb276f1c68bcb28cd57d55b74e8b6a7f 121 Gene3D G3DSA:3.10.450.50 6 121 2.9E-12 T 28-03-2018 AL549_RS05880 fb276f1c68bcb28cd57d55b74e8b6a7f 121 SUPERFAMILY SSF54427 6 120 4.78E-19 T 28-03-2018 IPR032710 NTF2-like domain AL549_RS05880 fb276f1c68bcb28cd57d55b74e8b6a7f 121 PIRSF PIRSF030561 5 121 1.9E-44 T 28-03-2018 IPR008317 Uncharacterised conserved protein UCP030561 AL549_RS16855 94d28a5201ada6e1b5c34c8e4f4e813f 189 Gene3D G3DSA:2.40.10.220 6 177 4.8E-6 T 28-03-2018 AL549_RS21995 ecb4533e264a69459dbe56c332d952a1 161 SUPERFAMILY SSF52255 2 158 1.07E-66 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL549_RS21995 ecb4533e264a69459dbe56c332d952a1 161 Gene3D G3DSA:3.40.50.7700 1 161 4.2E-66 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL549_RS21995 ecb4533e264a69459dbe56c332d952a1 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.541 T 28-03-2018 IPR033747 Class I PurE AL549_RS21995 ecb4533e264a69459dbe56c332d952a1 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 7.9E-68 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL549_RS21995 ecb4533e264a69459dbe56c332d952a1 161 Pfam PF00731 AIR carboxylase 2 150 5.2E-65 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL549_RS21995 ecb4533e264a69459dbe56c332d952a1 161 PIRSF PIRSF001338 1 160 1.1E-68 T 28-03-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AL549_RS21995 ecb4533e264a69459dbe56c332d952a1 161 SMART SM01001 1 152 3.1E-104 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL549_RS17795 91f6f6e2b58abc0188569cd3d5079a69 171 SMART SM00935 17 171 1.1E-39 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 AL549_RS17795 91f6f6e2b58abc0188569cd3d5079a69 171 PIRSF PIRSF002094 3 171 1.3E-38 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 AL549_RS17795 91f6f6e2b58abc0188569cd3d5079a69 171 Pfam PF03938 Outer membrane protein (OmpH-like) 15 169 3.4E-25 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 AL549_RS17795 91f6f6e2b58abc0188569cd3d5079a69 171 Gene3D G3DSA:3.30.910.20 17 171 2.7E-20 T 28-03-2018 AL549_RS17795 91f6f6e2b58abc0188569cd3d5079a69 171 SUPERFAMILY SSF111384 28 170 1.57E-29 T 28-03-2018 IPR024930 Skp domain AL549_RS11850 cbeb1481c0ae67e3930690f0f2c54657 70 SUPERFAMILY SSF50249 4 69 3.43E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS11850 cbeb1481c0ae67e3930690f0f2c54657 70 PIRSF PIRSF002599 1 70 8.2E-26 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 AL549_RS11850 cbeb1481c0ae67e3930690f0f2c54657 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 28-03-2018 IPR019844 Cold-shock conserved site AL549_RS11850 cbeb1481c0ae67e3930690f0f2c54657 70 PRINTS PR00050 Cold shock protein signature 7 22 3.4E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL549_RS11850 cbeb1481c0ae67e3930690f0f2c54657 70 PRINTS PR00050 Cold shock protein signature 43 61 3.4E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL549_RS11850 cbeb1481c0ae67e3930690f0f2c54657 70 PRINTS PR00050 Cold shock protein signature 28 37 3.4E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL549_RS11850 cbeb1481c0ae67e3930690f0f2c54657 70 SMART SM00357 6 70 1.1E-31 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AL549_RS11850 cbeb1481c0ae67e3930690f0f2c54657 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 5.3E-31 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL549_RS11850 cbeb1481c0ae67e3930690f0f2c54657 70 Gene3D G3DSA:2.40.50.140 2 70 8.0E-29 T 28-03-2018 AL549_RS18890 86b4cf2552052ae117a02d49760c8862 255 Pfam PF07729 FCD domain 99 226 2.4E-17 T 28-03-2018 IPR011711 GntR, C-terminal AL549_RS18890 86b4cf2552052ae117a02d49760c8862 255 SUPERFAMILY SSF48008 98 235 1.15E-19 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL549_RS18890 86b4cf2552052ae117a02d49760c8862 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 3.5E-25 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS18890 86b4cf2552052ae117a02d49760c8862 255 SMART SM00895 99 227 3.7E-18 T 28-03-2018 IPR011711 GntR, C-terminal AL549_RS18890 86b4cf2552052ae117a02d49760c8862 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.6E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS18890 86b4cf2552052ae117a02d49760c8862 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.6E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS18890 86b4cf2552052ae117a02d49760c8862 255 Gene3D G3DSA:1.10.10.10 1 76 7.0E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS18890 86b4cf2552052ae117a02d49760c8862 255 SUPERFAMILY SSF46785 5 76 2.73E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS18890 86b4cf2552052ae117a02d49760c8862 255 Gene3D G3DSA:1.20.120.530 82 245 6.5E-24 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL549_RS18890 86b4cf2552052ae117a02d49760c8862 255 SMART SM00345 15 74 1.3E-27 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS12170 07e9af9d4ed332fdc4e048492fe4b00d 468 Pfam PF02321 Outer membrane efflux protein 267 445 4.1E-24 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL549_RS12170 07e9af9d4ed332fdc4e048492fe4b00d 468 Pfam PF02321 Outer membrane efflux protein 28 242 3.7E-25 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL549_RS12170 07e9af9d4ed332fdc4e048492fe4b00d 468 SUPERFAMILY SSF56954 105 445 6.8E-69 T 28-03-2018 AL549_RS12170 07e9af9d4ed332fdc4e048492fe4b00d 468 SUPERFAMILY SSF56954 2 79 6.8E-69 T 28-03-2018 AL549_RS12170 07e9af9d4ed332fdc4e048492fe4b00d 468 Gene3D G3DSA:1.20.1600.10 14 454 1.5E-57 T 28-03-2018 AL549_RS23555 e8629fc903e0fe49625e3f4aaa4d9f0a 388 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 28-03-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 AL549_RS23555 e8629fc903e0fe49625e3f4aaa4d9f0a 388 Gene3D G3DSA:3.40.50.300 159 344 3.5E-33 T 28-03-2018 AL549_RS23555 e8629fc903e0fe49625e3f4aaa4d9f0a 388 PIRSF PIRSF002401 1 373 2.1E-137 T 28-03-2018 IPR035101 GTP-binding protein, Obg-type AL549_RS23555 e8629fc903e0fe49625e3f4aaa4d9f0a 388 Pfam PF01926 50S ribosome-binding GTPase 161 284 2.3E-23 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS23555 e8629fc903e0fe49625e3f4aaa4d9f0a 388 Gene3D G3DSA:2.70.210.12 2 156 3.9E-54 T 28-03-2018 IPR006169 GTP1/OBG domain AL549_RS23555 e8629fc903e0fe49625e3f4aaa4d9f0a 388 SUPERFAMILY SSF52540 151 341 1.43E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS23555 e8629fc903e0fe49625e3f4aaa4d9f0a 388 SUPERFAMILY SSF82051 2 157 2.35E-55 T 28-03-2018 IPR006169 GTP1/OBG domain AL549_RS23555 e8629fc903e0fe49625e3f4aaa4d9f0a 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.0E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS23555 e8629fc903e0fe49625e3f4aaa4d9f0a 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.0E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS23555 e8629fc903e0fe49625e3f4aaa4d9f0a 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.0E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS23555 e8629fc903e0fe49625e3f4aaa4d9f0a 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.0E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS23555 e8629fc903e0fe49625e3f4aaa4d9f0a 388 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 6.7E-144 T 28-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AL549_RS23555 e8629fc903e0fe49625e3f4aaa4d9f0a 388 Pfam PF01018 GTP1/OBG 4 156 2.6E-56 T 28-03-2018 IPR006169 GTP1/OBG domain AL549_RS23555 e8629fc903e0fe49625e3f4aaa4d9f0a 388 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.976 T 28-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AL549_RS18915 5a3c3ab1c50b2c8d2dfb891b617a6158 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 4.8E-30 T 28-03-2018 IPR018076 Type II secretion system F domain AL549_RS18915 5a3c3ab1c50b2c8d2dfb891b617a6158 408 Pfam PF00482 Type II secretion system (T2SS), protein F 277 399 2.2E-26 T 28-03-2018 IPR018076 Type II secretion system F domain AL549_RS18915 5a3c3ab1c50b2c8d2dfb891b617a6158 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 28-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AL549_RS18915 5a3c3ab1c50b2c8d2dfb891b617a6158 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 372 386 4.6E-21 T 28-03-2018 IPR003004 GspF/PilC family AL549_RS18915 5a3c3ab1c50b2c8d2dfb891b617a6158 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 4.6E-21 T 28-03-2018 IPR003004 GspF/PilC family AL549_RS18915 5a3c3ab1c50b2c8d2dfb891b617a6158 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 388 407 4.6E-21 T 28-03-2018 IPR003004 GspF/PilC family AL549_RS18915 5a3c3ab1c50b2c8d2dfb891b617a6158 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 4.6E-21 T 28-03-2018 IPR003004 GspF/PilC family AL549_RS05765 401f871a6ec0a79fad6e96cf9aa25874 481 Pfam PF01266 FAD dependent oxidoreductase 12 373 2.6E-11 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL549_RS05765 401f871a6ec0a79fad6e96cf9aa25874 481 Gene3D G3DSA:3.50.50.60 6 437 9.1E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05765 401f871a6ec0a79fad6e96cf9aa25874 481 SUPERFAMILY SSF51905 135 308 1.47E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05765 401f871a6ec0a79fad6e96cf9aa25874 481 SUPERFAMILY SSF51905 11 59 1.47E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS09710 fc9320307ba2b69256e5c181099c883c 123 PIRSF PIRSF030962 1 123 2.4E-64 T 28-03-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL549_RS09710 fc9320307ba2b69256e5c181099c883c 123 SUPERFAMILY SSF54637 15 109 4.39E-16 T 28-03-2018 IPR029069 HotDog domain AL549_RS09710 fc9320307ba2b69256e5c181099c883c 123 Gene3D G3DSA:3.10.129.10 8 123 1.9E-18 T 28-03-2018 AL549_RS21945 f28a21d71adfdbd033462242058f84f2 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 1.8E-115 T 28-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AL549_RS21945 f28a21d71adfdbd033462242058f84f2 481 Pfam PF02386 Cation transport protein 60 475 7.7E-51 T 28-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AL549_RS21945 f28a21d71adfdbd033462242058f84f2 481 PIRSF PIRSF006247 1 481 2.9E-165 T 28-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AL549_RS11710 595a14d79dcf57c97b82b9eb835bd033 212 PIRSF PIRSF000709 27 171 0.0075 T 28-03-2018 AL549_RS11710 595a14d79dcf57c97b82b9eb835bd033 212 Gene3D G3DSA:3.40.50.1240 1 198 8.9E-39 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AL549_RS11710 595a14d79dcf57c97b82b9eb835bd033 212 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 183 1.7E-37 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL549_RS11710 595a14d79dcf57c97b82b9eb835bd033 212 SMART SM00855 2 151 9.4E-11 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL549_RS11710 595a14d79dcf57c97b82b9eb835bd033 212 SUPERFAMILY SSF53254 1 184 1.03E-35 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AL549_RS11710 595a14d79dcf57c97b82b9eb835bd033 212 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 179 4.2E-51 T 28-03-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL549_RS17125 61b37f69b56c609d2406575c7f1b70da 344 Pfam PF11059 Protein of unknown function (DUF2860) 44 343 2.9E-106 T 28-03-2018 IPR016896 Protein of unknown function DUF2860 AL549_RS17125 61b37f69b56c609d2406575c7f1b70da 344 PIRSF PIRSF028696 11 344 5.1E-138 T 28-03-2018 IPR016896 Protein of unknown function DUF2860 AL549_RS12345 a9e0863a58ac53cdfc4aa7a5ff349c8f 161 Gene3D G3DSA:3.10.129.10 3 157 9.7E-13 T 28-03-2018 AL549_RS12345 a9e0863a58ac53cdfc4aa7a5ff349c8f 161 SUPERFAMILY SSF54637 12 156 1.49E-15 T 28-03-2018 IPR029069 HotDog domain AL549_RS12345 a9e0863a58ac53cdfc4aa7a5ff349c8f 161 Pfam PF14539 Domain of unknown function (DUF4442) 18 127 6.1E-10 T 28-03-2018 IPR027961 Protein of unknown function DUF4442 AL549_RS23775 1cd8e7c2bf14e87ebcd57a045e1166f4 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 7.4E-82 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AL549_RS23775 1cd8e7c2bf14e87ebcd57a045e1166f4 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.6 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AL549_RS23775 1cd8e7c2bf14e87ebcd57a045e1166f4 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 1.1E-72 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AL549_RS09665 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.7E-43 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS09665 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.7E-43 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS09665 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.7E-43 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS09665 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 3.7E-43 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS09665 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.7E-43 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS09665 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.7E-43 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS09665 278611f15c3eaa41853f68d1d74f6844 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 1.1E-124 T 28-03-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL549_RS09665 278611f15c3eaa41853f68d1d74f6844 241 Gene3D G3DSA:3.40.50.720 160 240 3.5E-22 T 28-03-2018 AL549_RS09665 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.0E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS09665 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.0E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS09665 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.0E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS09665 278611f15c3eaa41853f68d1d74f6844 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 1.3E-57 T 28-03-2018 AL549_RS09665 278611f15c3eaa41853f68d1d74f6844 241 Gene3D G3DSA:3.40.50.720 2 159 6.7E-41 T 28-03-2018 AL549_RS09665 278611f15c3eaa41853f68d1d74f6844 241 SUPERFAMILY SSF51735 3 240 1.64E-73 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS10240 af7735afaf647f503498763606a2b401 441 Pfam PF03553 Na+/H+ antiporter family 150 435 9.0E-77 T 28-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL549_RS10240 af7735afaf647f503498763606a2b401 441 Pfam PF13726 Na+-H+ antiporter family 2 88 1.3E-35 T 28-03-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal AL549_RS10240 af7735afaf647f503498763606a2b401 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 2.6E-6 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS10240 af7735afaf647f503498763606a2b401 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 2.6E-6 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS19280 fb0bc43b93c7cad344ffaa1e46c375eb 103 SUPERFAMILY SSF102829 6 94 1.57E-23 T 28-03-2018 IPR007838 Cell division protein ZapA-like AL549_RS19280 fb0bc43b93c7cad344ffaa1e46c375eb 103 Pfam PF05164 Cell division protein ZapA 6 89 2.8E-19 T 28-03-2018 IPR007838 Cell division protein ZapA-like AL549_RS22920 e3775dcbef91b94eebd163dd9d24b8ad 265 Pfam PF06251 Capsule biosynthesis GfcC 34 263 1.3E-76 T 28-03-2018 IPR010425 Domain of unknown function DUF1017 AL549_RS22605 846b7357515965177ab1c139ac6f0711 90 SMART SM01409 8 61 1.3E-16 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AL549_RS22605 846b7357515965177ab1c139ac6f0711 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.9 T 28-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS22605 846b7357515965177ab1c139ac6f0711 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.8E-29 T 28-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL549_RS22605 846b7357515965177ab1c139ac6f0711 90 SUPERFAMILY SSF63562 1 78 7.85E-26 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AL549_RS22605 846b7357515965177ab1c139ac6f0711 90 Pfam PF01192 RNA polymerase Rpb6 10 60 3.7E-18 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AL549_RS22605 846b7357515965177ab1c139ac6f0711 90 Gene3D G3DSA:3.90.940.10 1 90 2.6E-28 T 28-03-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AL549_RS06210 d9c90bdbb964145545418954a7c2add5 410 Gene3D G3DSA:1.20.1250.20 213 410 9.2E-25 T 28-03-2018 AL549_RS06210 d9c90bdbb964145545418954a7c2add5 410 SUPERFAMILY SSF103473 9 399 5.89E-57 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS06210 d9c90bdbb964145545418954a7c2add5 410 Gene3D G3DSA:1.20.1250.20 6 200 4.3E-22 T 28-03-2018 AL549_RS06210 d9c90bdbb964145545418954a7c2add5 410 Pfam PF07690 Major Facilitator Superfamily 15 294 7.1E-30 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS11340 e66f95db34cc03a19dcc1f693eb39680 402 Gene3D G3DSA:3.90.1150.10 257 393 1.7E-34 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS11340 e66f95db34cc03a19dcc1f693eb39680 402 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 1.4E-171 T 28-03-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AL549_RS11340 e66f95db34cc03a19dcc1f693eb39680 402 PIRSF PIRSF001434 1 391 1.8E-124 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL549_RS11340 e66f95db34cc03a19dcc1f693eb39680 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 388 1.5E-116 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL549_RS11340 e66f95db34cc03a19dcc1f693eb39680 402 SUPERFAMILY SSF53383 21 388 2.02E-99 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS11340 e66f95db34cc03a19dcc1f693eb39680 402 Gene3D G3DSA:3.40.640.10 4 256 5.4E-50 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS11340 e66f95db34cc03a19dcc1f693eb39680 402 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL549_RS08450 56ef6e0fb639c111bc4279e03e3b3e53 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 1.3E-17 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal AL549_RS08450 56ef6e0fb639c111bc4279e03e3b3e53 554 SUPERFAMILY SSF52540 1 199 4.33E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS08450 56ef6e0fb639c111bc4279e03e3b3e53 554 SUPERFAMILY SSF52540 287 510 4.33E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS08450 56ef6e0fb639c111bc4279e03e3b3e53 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 2.0E-170 T 28-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AL549_RS08450 56ef6e0fb639c111bc4279e03e3b3e53 554 Gene3D G3DSA:3.40.50.300 1 533 4.5E-40 T 28-03-2018 AL549_RS08450 56ef6e0fb639c111bc4279e03e3b3e53 554 PIRSF PIRSF003128 1 554 5.3E-160 T 28-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AL549_RS11565 9af49552851ba75be8d779f8953c33fa 195 SUPERFAMILY SSF159894 3 102 4.97E-29 T 28-03-2018 AL549_RS11565 9af49552851ba75be8d779f8953c33fa 195 Gene3D G3DSA:1.10.150.20 115 194 1.6E-19 T 28-03-2018 AL549_RS11565 9af49552851ba75be8d779f8953c33fa 195 PIRSF PIRSF028788 4 194 7.8E-40 T 28-03-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type AL549_RS11565 9af49552851ba75be8d779f8953c33fa 195 Pfam PF04993 TfoX N-terminal domain 11 101 4.2E-26 T 28-03-2018 IPR007076 TfoX, N-terminal AL549_RS11565 9af49552851ba75be8d779f8953c33fa 195 Gene3D G3DSA:3.30.1460.30 3 103 6.4E-16 T 28-03-2018 AL549_RS11565 9af49552851ba75be8d779f8953c33fa 195 Pfam PF04994 TfoX C-terminal domain 114 193 2.5E-28 T 28-03-2018 IPR007077 TfoX, C-terminal AL549_RS10705 2f04465a1f13f72f2d36ed7cf41d56d9 316 Gene3D G3DSA:3.40.47.10 163 316 4.9E-41 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS10705 2f04465a1f13f72f2d36ed7cf41d56d9 316 SUPERFAMILY SSF53901 3 316 9.29E-73 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS10705 2f04465a1f13f72f2d36ed7cf41d56d9 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 8.9E-145 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL549_RS10705 2f04465a1f13f72f2d36ed7cf41d56d9 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 4.1E-32 T 28-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL549_RS10705 2f04465a1f13f72f2d36ed7cf41d56d9 316 Gene3D G3DSA:3.40.47.10 4 162 1.4E-42 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS10705 2f04465a1f13f72f2d36ed7cf41d56d9 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 73.317 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL549_RS10705 2f04465a1f13f72f2d36ed7cf41d56d9 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 6.8E-35 T 28-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL549_RS03105 9d20d4640b932593a6b1837285bd404d 268 SMART SM00342 181 263 3.2E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS03105 9d20d4640b932593a6b1837285bd404d 268 Gene3D G3DSA:1.10.10.60 167 217 0.0078 T 28-03-2018 AL549_RS03105 9d20d4640b932593a6b1837285bd404d 268 SUPERFAMILY SSF46689 216 264 5.73E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS03105 9d20d4640b932593a6b1837285bd404d 268 Pfam PF12833 Helix-turn-helix domain 188 264 2.7E-15 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS03105 9d20d4640b932593a6b1837285bd404d 268 Gene3D G3DSA:1.10.10.60 218 266 6.4E-12 T 28-03-2018 AL549_RS23030 b29b1708f4c2e5a5286543211b66f41e 376 Gene3D G3DSA:3.40.50.2000 1 213 2.4E-67 T 28-03-2018 AL549_RS23030 b29b1708f4c2e5a5286543211b66f41e 376 Gene3D G3DSA:3.40.50.2000 283 376 4.5E-22 T 28-03-2018 AL549_RS23030 b29b1708f4c2e5a5286543211b66f41e 376 SUPERFAMILY SSF53756 3 375 1.67E-111 T 28-03-2018 AL549_RS23030 b29b1708f4c2e5a5286543211b66f41e 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 361 8.6E-90 T 28-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 AL549_RS23030 b29b1708f4c2e5a5286543211b66f41e 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 363 2.3E-68 T 28-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 AL549_RS23680 e378cf902f1ac7eba8d7e9dd6102a603 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 1.8E-154 T 28-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS23680 e378cf902f1ac7eba8d7e9dd6102a603 470 SUPERFAMILY SSF51621 1 74 1.4E-101 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL549_RS23680 e378cf902f1ac7eba8d7e9dd6102a603 470 SUPERFAMILY SSF51621 156 339 1.4E-101 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL549_RS23680 e378cf902f1ac7eba8d7e9dd6102a603 470 Gene3D G3DSA:3.20.20.60 2 156 2.8E-36 T 28-03-2018 AL549_RS23680 e378cf902f1ac7eba8d7e9dd6102a603 470 Gene3D G3DSA:3.20.20.60 157 321 1.1E-69 T 28-03-2018 AL549_RS23680 e378cf902f1ac7eba8d7e9dd6102a603 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.3E-27 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS23680 e378cf902f1ac7eba8d7e9dd6102a603 470 SUPERFAMILY SSF52935 323 469 7.85E-34 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS23680 e378cf902f1ac7eba8d7e9dd6102a603 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 7.9E-186 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS23680 e378cf902f1ac7eba8d7e9dd6102a603 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 8.7E-80 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS23680 e378cf902f1ac7eba8d7e9dd6102a603 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 8.7E-80 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS23680 e378cf902f1ac7eba8d7e9dd6102a603 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 8.7E-80 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS23680 e378cf902f1ac7eba8d7e9dd6102a603 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 8.7E-80 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS23680 e378cf902f1ac7eba8d7e9dd6102a603 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 8.7E-80 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS23680 e378cf902f1ac7eba8d7e9dd6102a603 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 8.7E-80 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS23680 e378cf902f1ac7eba8d7e9dd6102a603 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 8.7E-80 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS23680 e378cf902f1ac7eba8d7e9dd6102a603 470 SUPERFAMILY SSF50800 70 167 4.88E-29 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain AL549_RS23680 e378cf902f1ac7eba8d7e9dd6102a603 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 28-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS23680 e378cf902f1ac7eba8d7e9dd6102a603 470 Gene3D G3DSA:3.40.1380.20 322 470 4.4E-44 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL549_RS13090 0505e6aff0bbb264e429f06a3bcfa712 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.4E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS10815 50668fcebf0d5bf726f3801fecbdde5b 227 PIRSF PIRSF037290 1 227 1.0E-78 T 28-03-2018 IPR017166 Uncharacterised conserved protein UCP037290 AL549_RS10815 50668fcebf0d5bf726f3801fecbdde5b 227 SUPERFAMILY SSF52540 47 157 2.28E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS10815 50668fcebf0d5bf726f3801fecbdde5b 227 Gene3D G3DSA:3.40.50.300 46 158 9.2E-19 T 28-03-2018 AL549_RS21690 5c97f8c49ba192b1326fece745f1de6b 693 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 554 9.1E-204 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL549_RS21690 5c97f8c49ba192b1326fece745f1de6b 693 Gene3D G3DSA:1.10.730.10 578 688 3.7E-13 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS21690 5c97f8c49ba192b1326fece745f1de6b 693 SUPERFAMILY SSF109604 351 489 9.73E-12 T 28-03-2018 AL549_RS21690 5c97f8c49ba192b1326fece745f1de6b 693 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 692 1.1E-293 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL549_RS21690 5c97f8c49ba192b1326fece745f1de6b 693 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 691 25.756 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL549_RS21690 5c97f8c49ba192b1326fece745f1de6b 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 2.0E-35 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL549_RS21690 5c97f8c49ba192b1326fece745f1de6b 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 2.0E-35 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL549_RS21690 5c97f8c49ba192b1326fece745f1de6b 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 2.0E-35 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL549_RS21690 5c97f8c49ba192b1326fece745f1de6b 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 2.0E-35 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL549_RS21690 5c97f8c49ba192b1326fece745f1de6b 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 2.0E-35 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL549_RS21690 5c97f8c49ba192b1326fece745f1de6b 693 Pfam PF05746 DALR anticodon binding domain 585 682 1.6E-9 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AL549_RS04010 76e1cd9ecf496bcbe087f8f1a10f4533 153 SUPERFAMILY SSF46785 1 60 4.21E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS04010 76e1cd9ecf496bcbe087f8f1a10f4533 153 Pfam PF01037 Lrp/AsnC ligand binding domain 67 139 3.0E-21 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL549_RS04010 76e1cd9ecf496bcbe087f8f1a10f4533 153 Gene3D G3DSA:3.30.70.920 54 150 3.2E-25 T 28-03-2018 AL549_RS04010 76e1cd9ecf496bcbe087f8f1a10f4533 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 2.5E-20 T 28-03-2018 AL549_RS04010 76e1cd9ecf496bcbe087f8f1a10f4533 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.8E-15 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS04010 76e1cd9ecf496bcbe087f8f1a10f4533 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.8E-15 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS04010 76e1cd9ecf496bcbe087f8f1a10f4533 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.8E-15 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL549_RS04010 76e1cd9ecf496bcbe087f8f1a10f4533 153 SUPERFAMILY SSF54909 63 149 1.32E-21 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL549_RS04010 76e1cd9ecf496bcbe087f8f1a10f4533 153 Gene3D G3DSA:1.10.10.10 1 52 2.7E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS04010 76e1cd9ecf496bcbe087f8f1a10f4533 153 SMART SM00344 1 110 2.3E-43 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL549_RS08645 af56929e8f868c7031a22642affb9a2e 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 1.3E-42 T 28-03-2018 IPR011605 NusB antitermination factor GO:0006353 AL549_RS08645 af56929e8f868c7031a22642affb9a2e 155 SUPERFAMILY SSF48013 7 153 1.7E-38 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL549_RS08645 af56929e8f868c7031a22642affb9a2e 155 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 8 153 22.894 T 28-03-2018 IPR011605 NusB antitermination factor GO:0006353 AL549_RS08645 af56929e8f868c7031a22642affb9a2e 155 Pfam PF01029 NusB family 11 149 2.7E-35 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL549_RS08645 af56929e8f868c7031a22642affb9a2e 155 Gene3D G3DSA:1.10.940.10 5 155 1.6E-40 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL549_RS18055 9eb6075f6474d0a0962a8ea86300f3a2 466 Pfam PF07690 Major Facilitator Superfamily 24 342 2.6E-16 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS18055 9eb6075f6474d0a0962a8ea86300f3a2 466 Gene3D G3DSA:1.20.1250.20 4 225 8.1E-21 T 28-03-2018 AL549_RS18055 9eb6075f6474d0a0962a8ea86300f3a2 466 Gene3D G3DSA:1.20.1250.20 240 462 2.1E-17 T 28-03-2018 AL549_RS18055 9eb6075f6474d0a0962a8ea86300f3a2 466 SUPERFAMILY SSF103473 9 438 5.1E-39 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS04985 f264599db5213cec9fce64910a00a547 197 SUPERFAMILY SSF53335 9 184 2.15E-29 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS04985 f264599db5213cec9fce64910a00a547 197 Gene3D G3DSA:3.40.50.150 1 188 1.9E-25 T 28-03-2018 AL549_RS04985 f264599db5213cec9fce64910a00a547 197 Pfam PF08242 Methyltransferase domain 45 139 3.8E-13 T 28-03-2018 IPR013217 Methyltransferase type 12 AL549_RS22120 e4d78e3ee134e5ada8d1ff331086af26 94 Gene3D G3DSA:1.10.287.1050 31 81 6.6E-4 T 28-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 AL549_RS09690 bdffd952869743f62e292057d16ba91d 218 SUPERFAMILY SSF89392 39 205 1.41E-23 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL549_RS09690 bdffd952869743f62e292057d16ba91d 218 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 52 205 5.5E-12 T 28-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AL549_RS09690 bdffd952869743f62e292057d16ba91d 218 Gene3D G3DSA:2.50.20.10 36 212 1.9E-20 T 28-03-2018 AL549_RS02690 12751a548f60b1eec3fe448c06749086 321 Pfam PF07729 FCD domain 183 288 2.1E-6 T 28-03-2018 IPR011711 GntR, C-terminal AL549_RS02690 12751a548f60b1eec3fe448c06749086 321 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 73 4.9E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS02690 12751a548f60b1eec3fe448c06749086 321 Gene3D G3DSA:1.20.120.530 158 302 2.0E-7 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL549_RS02690 12751a548f60b1eec3fe448c06749086 321 SMART SM00895 165 289 5.9E-8 T 28-03-2018 IPR011711 GntR, C-terminal AL549_RS02690 12751a548f60b1eec3fe448c06749086 321 Gene3D G3DSA:1.10.10.10 2 75 3.0E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02690 12751a548f60b1eec3fe448c06749086 321 Gene3D G3DSA:1.10.10.10 82 155 7.7E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02690 12751a548f60b1eec3fe448c06749086 321 SUPERFAMILY SSF46785 11 73 1.55E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02690 12751a548f60b1eec3fe448c06749086 321 SUPERFAMILY SSF48008 164 295 7.06E-11 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL549_RS10045 a4ddc7dd0b20e5d280459af9075366ed 583 SUPERFAMILY SSF51338 537 578 2.88E-17 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS10045 a4ddc7dd0b20e5d280459af9075366ed 583 SUPERFAMILY SSF51338 35 98 2.88E-17 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS10045 a4ddc7dd0b20e5d280459af9075366ed 583 Gene3D G3DSA:2.30.40.10 23 202 5.0E-17 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS10045 a4ddc7dd0b20e5d280459af9075366ed 583 Pfam PF07969 Amidohydrolase family 86 578 6.1E-120 T 28-03-2018 IPR013108 Amidohydrolase 3 AL549_RS10045 a4ddc7dd0b20e5d280459af9075366ed 583 Gene3D G3DSA:3.20.20.140 228 534 4.6E-41 T 28-03-2018 AL549_RS10045 a4ddc7dd0b20e5d280459af9075366ed 583 SUPERFAMILY SSF51556 97 118 1.13E-25 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL549_RS10045 a4ddc7dd0b20e5d280459af9075366ed 583 SUPERFAMILY SSF51556 236 331 1.13E-25 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL549_RS10045 a4ddc7dd0b20e5d280459af9075366ed 583 SUPERFAMILY SSF51556 359 538 1.13E-25 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL549_RS07585 f957db08b5df5b36f30b25b128eca278 132 SUPERFAMILY SSF55811 1 128 3.79E-36 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL549_RS07585 f957db08b5df5b36f30b25b128eca278 132 Gene3D G3DSA:3.90.79.10 1 130 8.5E-32 T 28-03-2018 AL549_RS07585 f957db08b5df5b36f30b25b128eca278 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 2.0E-43 T 28-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AL549_RS07585 f957db08b5df5b36f30b25b128eca278 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL549_RS07585 f957db08b5df5b36f30b25b128eca278 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 1.0E-9 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL549_RS07585 f957db08b5df5b36f30b25b128eca278 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 1.0E-9 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL549_RS07585 f957db08b5df5b36f30b25b128eca278 132 Pfam PF00293 NUDIX domain 7 126 3.8E-22 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL549_RS17950 d0d26ad01d39c9e46ac4d8663b2c0ed2 224 Gene3D G3DSA:1.10.3680.10 93 224 1.4E-17 T 28-03-2018 IPR029024 TerB-like AL549_RS17950 d0d26ad01d39c9e46ac4d8663b2c0ed2 224 Pfam PF04391 Protein of unknown function (DUF533) 43 223 1.9E-61 T 28-03-2018 IPR007486 Inner membrane protein YebE AL549_RS17950 d0d26ad01d39c9e46ac4d8663b2c0ed2 224 SUPERFAMILY SSF158682 81 223 1.83E-27 T 28-03-2018 AL549_RS11585 9f9bf7574aca2ade87d669c8d7d3ab7a 420 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 410 1.0E-36 T 28-03-2018 IPR010352 Protein of unknown function DUF945 AL549_RS04320 a71deb6597f7939f1faa5daef8f0589d 313 Gene3D G3DSA:3.30.360.10 122 312 1.2E-4 T 28-03-2018 AL549_RS04320 a71deb6597f7939f1faa5daef8f0589d 313 SUPERFAMILY SSF55347 121 269 1.18E-44 T 28-03-2018 AL549_RS04320 a71deb6597f7939f1faa5daef8f0589d 313 SUPERFAMILY SSF51735 1 136 6.86E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS04320 a71deb6597f7939f1faa5daef8f0589d 313 Gene3D G3DSA:3.40.50.720 1 121 9.6E-26 T 28-03-2018 AL549_RS04320 a71deb6597f7939f1faa5daef8f0589d 313 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 7.6E-16 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AL549_RS01230 bd33f2a07f65b4df1270f62e6fedfe5e 538 Gene3D G3DSA:3.50.50.60 85 533 6.5E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS01230 bd33f2a07f65b4df1270f62e6fedfe5e 538 SUPERFAMILY SSF51905 100 286 3.73E-37 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS01230 bd33f2a07f65b4df1270f62e6fedfe5e 538 SUPERFAMILY SSF51905 479 529 3.73E-37 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS01230 bd33f2a07f65b4df1270f62e6fedfe5e 538 PIRSF PIRSF038984 1 535 1.1E-240 T 28-03-2018 IPR028348 FAD dependent protein AL549_RS01230 bd33f2a07f65b4df1270f62e6fedfe5e 538 Pfam PF01593 Flavin containing amine oxidoreductase 214 267 3.1E-4 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AL549_RS23765 dc2de8b1d8f312fd5c7968779fa9a034 119 SUPERFAMILY SSF55620 3 117 3.45E-37 T 28-03-2018 AL549_RS23765 dc2de8b1d8f312fd5c7968779fa9a034 119 Pfam PF02152 Dihydroneopterin aldolase 6 115 1.6E-32 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL549_RS23765 dc2de8b1d8f312fd5c7968779fa9a034 119 Gene3D G3DSA:3.30.1130.10 3 119 5.1E-36 T 28-03-2018 AL549_RS23765 dc2de8b1d8f312fd5c7968779fa9a034 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 116 1.3E-29 T 28-03-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL549_RS23765 dc2de8b1d8f312fd5c7968779fa9a034 119 SMART SM00905 6 116 9.5E-49 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL549_RS23765 dc2de8b1d8f312fd5c7968779fa9a034 119 TIGRFAM TIGR00526 folB_dom: FolB domain 4 117 3.1E-36 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL549_RS03705 955262cddaa9bfa3ae10a694fd8c261d 242 SMART SM00382 27 218 2.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS03705 955262cddaa9bfa3ae10a694fd8c261d 242 Gene3D G3DSA:3.40.50.300 1 242 1.7E-66 T 28-03-2018 AL549_RS03705 955262cddaa9bfa3ae10a694fd8c261d 242 SUPERFAMILY SSF52540 3 232 2.54E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS03705 955262cddaa9bfa3ae10a694fd8c261d 242 PIRSF PIRSF039085 1 242 1.2E-88 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL549_RS03705 955262cddaa9bfa3ae10a694fd8c261d 242 Pfam PF00005 ABC transporter 18 170 8.5E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS03705 955262cddaa9bfa3ae10a694fd8c261d 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS13220 f2b28a0e0b47c9222e32c9b45ed72952 49 Pfam PF11665 Protein of unknown function (DUF3265) 18 45 9.9E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS15930 e5fb85ddf41716dfa8b48476dd72bf91 519 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 11 502 3.9E-240 T 28-03-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted AL549_RS15930 e5fb85ddf41716dfa8b48476dd72bf91 519 PIRSF PIRSF028991 5 514 1.5E-287 T 28-03-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted AL549_RS15930 e5fb85ddf41716dfa8b48476dd72bf91 519 Gene3D G3DSA:3.20.70.20 166 474 1.0E-31 T 28-03-2018 AL549_RS15930 e5fb85ddf41716dfa8b48476dd72bf91 519 SUPERFAMILY SSF51998 24 468 9.16E-89 T 28-03-2018 AL549_RS15930 e5fb85ddf41716dfa8b48476dd72bf91 519 Pfam PF11230 Protein of unknown function (DUF3029) 21 502 1.0E-226 T 28-03-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted AL549_RS20485 8df298d839681030beb360542fb55ec1 399 SMART SM00244 87 247 1.9E-52 T 28-03-2018 IPR001107 Band 7 domain AL549_RS20485 8df298d839681030beb360542fb55ec1 399 Pfam PF12221 Bacterial membrane protein N terminal 1 58 7.4E-14 T 28-03-2018 IPR020980 Menbrane protein HflK, N-terminal AL549_RS20485 8df298d839681030beb360542fb55ec1 399 PRINTS PR00721 Stomatin signature 141 162 6.1E-7 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AL549_RS20485 8df298d839681030beb360542fb55ec1 399 PRINTS PR00721 Stomatin signature 94 116 6.1E-7 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AL549_RS20485 8df298d839681030beb360542fb55ec1 399 PRINTS PR00721 Stomatin signature 197 220 6.1E-7 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AL549_RS20485 8df298d839681030beb360542fb55ec1 399 SUPERFAMILY SSF117892 120 252 8.5E-23 T 28-03-2018 IPR001107 Band 7 domain AL549_RS20485 8df298d839681030beb360542fb55ec1 399 Pfam PF01145 SPFH domain / Band 7 family 91 262 2.0E-31 T 28-03-2018 IPR001107 Band 7 domain AL549_RS20485 8df298d839681030beb360542fb55ec1 399 TIGRFAM TIGR01933 hflK: HflK protein 89 349 1.9E-124 T 28-03-2018 IPR010201 HflK GO:0016021 AL549_RS22840 f5f387a5fd004d047ff6a661b32bb264 146 Gene3D G3DSA:2.160.10.10 4 145 2.2E-22 T 28-03-2018 AL549_RS22840 f5f387a5fd004d047ff6a661b32bb264 146 PIRSF PIRSF000441 8 144 2.4E-35 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AL549_RS22840 f5f387a5fd004d047ff6a661b32bb264 146 SUPERFAMILY SSF51161 30 136 4.16E-31 T 28-03-2018 IPR011004 Trimeric LpxA-like AL549_RS22840 f5f387a5fd004d047ff6a661b32bb264 146 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 61 82 4.6E-4 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS22840 f5f387a5fd004d047ff6a661b32bb264 146 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 92 126 2.0E-7 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS12445 bd98d8b6a835ea475484404f649d3f05 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 52 2.0E-23 T 28-03-2018 IPR007040 Ribosome modulation factor AL549_RS12445 bd98d8b6a835ea475484404f649d3f05 57 Pfam PF04957 Ribosome modulation factor 1 54 8.0E-29 T 28-03-2018 IPR007040 Ribosome modulation factor AL549_RS12445 bd98d8b6a835ea475484404f649d3f05 57 Gene3D G3DSA:1.10.10.620 3 54 5.4E-25 T 28-03-2018 AL549_RS12445 bd98d8b6a835ea475484404f649d3f05 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.214 T 28-03-2018 IPR007040 Ribosome modulation factor AL549_RS04045 8c37b2a0e0f8b68f10761a34e10622bd 300 SUPERFAMILY SSF82866 112 284 4.45E-35 T 28-03-2018 AL549_RS04045 8c37b2a0e0f8b68f10761a34e10622bd 300 Pfam PF07549 SecD/SecF GG Motif 29 53 5.7E-7 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL549_RS04045 8c37b2a0e0f8b68f10761a34e10622bd 300 Gene3D G3DSA:1.20.1640.10 88 289 3.6E-29 T 28-03-2018 AL549_RS04045 8c37b2a0e0f8b68f10761a34e10622bd 300 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 35 276 1.5E-63 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AL549_RS04045 8c37b2a0e0f8b68f10761a34e10622bd 300 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 7.5E-24 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL549_RS04045 8c37b2a0e0f8b68f10761a34e10622bd 300 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 7.5E-24 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL549_RS04045 8c37b2a0e0f8b68f10761a34e10622bd 300 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 7.5E-24 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL549_RS04045 8c37b2a0e0f8b68f10761a34e10622bd 300 PRINTS PR01755 Bacterial translocase SecF protein signature 34 49 7.5E-24 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL549_RS04045 8c37b2a0e0f8b68f10761a34e10622bd 300 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 2 288 22.683 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AL549_RS04045 8c37b2a0e0f8b68f10761a34e10622bd 300 Pfam PF02355 Protein export membrane protein 101 284 1.4E-54 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL549_RS04045 8c37b2a0e0f8b68f10761a34e10622bd 300 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 107 274 2.4E-48 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL549_RS21235 41ec7dd26de4281583a91c840f7a183e 109 Pfam PF10694 Protein of unknown function (DUF2500) 2 105 3.9E-27 T 28-03-2018 IPR019635 Protein of unknown function DUF2500 AL549_RS12600 8ce70b69fd7e1394156582faaeb43d6a 406 Gene3D G3DSA:1.10.3430.10 12 384 2.2E-93 T 28-03-2018 AL549_RS12600 8ce70b69fd7e1394156582faaeb43d6a 406 ProSitePatterns PS01219 Ammonium transporters signature. 167 192 - T 28-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AL549_RS12600 8ce70b69fd7e1394156582faaeb43d6a 406 SUPERFAMILY SSF111352 17 384 2.22E-96 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AL549_RS12600 8ce70b69fd7e1394156582faaeb43d6a 406 Pfam PF00909 Ammonium Transporter Family 23 399 5.7E-88 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AL549_RS06945 52c729104f10482a040f7f852c8e7a93 280 Gene3D G3DSA:1.10.3720.10 83 268 2.5E-29 T 28-03-2018 AL549_RS06945 52c729104f10482a040f7f852c8e7a93 280 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 6 272 8.0E-125 T 28-03-2018 IPR017784 ABC transporter, choline, permease protein AL549_RS06945 52c729104f10482a040f7f852c8e7a93 280 SUPERFAMILY SSF161098 88 272 4.45E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS06945 52c729104f10482a040f7f852c8e7a93 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 267 5.0E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS23050 01ce9196b8b652cce531cc33abc24d4d 359 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 3 345 2.2E-170 T 28-03-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 AL549_RS23050 01ce9196b8b652cce531cc33abc24d4d 359 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 348 27.409 T 28-03-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 AL549_RS23050 01ce9196b8b652cce531cc33abc24d4d 359 Pfam PF00953 Glycosyl transferase family 4 69 227 9.8E-30 T 28-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 AL549_RS05665 d9d067ef2a31abc66c5138f925b9c3ed 518 SUPERFAMILY SSF52283 1 174 1.02E-52 T 28-03-2018 AL549_RS05665 d9d067ef2a31abc66c5138f925b9c3ed 518 SMART SM01003 4 143 6.0E-69 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL549_RS05665 d9d067ef2a31abc66c5138f925b9c3ed 518 SUPERFAMILY SSF51735 143 320 3.4E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS05665 d9d067ef2a31abc66c5138f925b9c3ed 518 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 28-03-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 AL549_RS05665 d9d067ef2a31abc66c5138f925b9c3ed 518 Gene3D G3DSA:3.40.50.720 203 383 3.8E-57 T 28-03-2018 AL549_RS05665 d9d067ef2a31abc66c5138f925b9c3ed 518 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 433 516 1.4E-36 T 28-03-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AL549_RS05665 d9d067ef2a31abc66c5138f925b9c3ed 518 Gene3D G3DSA:3.40.50.720 1 199 1.8E-47 T 28-03-2018 AL549_RS05665 d9d067ef2a31abc66c5138f925b9c3ed 518 SMART SM01002 152 317 1.8E-80 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL549_RS05665 d9d067ef2a31abc66c5138f925b9c3ed 518 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 147 374 2.5E-73 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL549_RS05665 d9d067ef2a31abc66c5138f925b9c3ed 518 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 143 1.3E-46 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL549_RS05665 d9d067ef2a31abc66c5138f925b9c3ed 518 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 516 1.8E-271 T 28-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AL549_RS05665 d9d067ef2a31abc66c5138f925b9c3ed 518 PIRSF PIRSF000203 1 516 3.7E-269 T 28-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AL549_RS12410 26288aa9ce4151863b62d6759693251c 1613 SUPERFAMILY SSF53223 754 940 7.0E-26 T 28-03-2018 AL549_RS12410 26288aa9ce4151863b62d6759693251c 1613 Gene3D G3DSA:3.40.50.10860 795 933 5.4E-5 T 28-03-2018 AL549_RS12410 26288aa9ce4151863b62d6759693251c 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1602 0.0 T 28-03-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AL549_RS12410 26288aa9ce4151863b62d6759693251c 1613 SUPERFAMILY SSF51735 945 1047 1.44E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS12410 26288aa9ce4151863b62d6759693251c 1613 SUPERFAMILY SSF51735 1083 1281 1.44E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS12410 26288aa9ce4151863b62d6759693251c 1613 PIRSF PIRSF036761 1 1610 0.0 T 28-03-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 AL549_RS12410 26288aa9ce4151863b62d6759693251c 1613 Gene3D G3DSA:3.40.50.720 938 1283 1.8E-48 T 28-03-2018 AL549_RS14335 bdfd83e1d7d6401174c00cca8a302cd1 101 SUPERFAMILY SSF54909 1 99 1.65E-21 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL549_RS14335 bdfd83e1d7d6401174c00cca8a302cd1 101 Pfam PF07978 NIPSNAP 5 99 2.5E-25 T 28-03-2018 IPR012577 NIPSNAP AL549_RS14335 bdfd83e1d7d6401174c00cca8a302cd1 101 Gene3D G3DSA:3.30.70.100 1 100 3.6E-18 T 28-03-2018 AL549_RS09905 d0c26f346d4ad892788f2f8dc9c1fa27 564 Gene3D G3DSA:3.40.50.1220 218 369 3.0E-21 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL549_RS09905 d0c26f346d4ad892788f2f8dc9c1fa27 564 Pfam PF16582 Middle domain of thiamine pyrophosphate 190 394 5.5E-44 T 28-03-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AL549_RS09905 d0c26f346d4ad892788f2f8dc9c1fa27 564 SUPERFAMILY SSF52518 381 554 2.7E-23 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS09905 d0c26f346d4ad892788f2f8dc9c1fa27 564 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 560 32.412 T 28-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AL549_RS09905 d0c26f346d4ad892788f2f8dc9c1fa27 564 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 418 531 5.8E-5 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL549_RS09905 d0c26f346d4ad892788f2f8dc9c1fa27 564 SUPERFAMILY SSF52518 9 179 1.07E-30 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS09905 d0c26f346d4ad892788f2f8dc9c1fa27 564 Gene3D G3DSA:3.40.50.970 4 204 3.2E-49 T 28-03-2018 AL549_RS09905 d0c26f346d4ad892788f2f8dc9c1fa27 564 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 436 1.4E-137 T 28-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AL549_RS09905 d0c26f346d4ad892788f2f8dc9c1fa27 564 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 142 1.7E-27 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL549_RS09905 d0c26f346d4ad892788f2f8dc9c1fa27 564 Gene3D G3DSA:3.40.50.970 370 558 1.4E-14 T 28-03-2018 AL549_RS09905 d0c26f346d4ad892788f2f8dc9c1fa27 564 SUPERFAMILY SSF52467 215 347 8.36E-9 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL549_RS09905 d0c26f346d4ad892788f2f8dc9c1fa27 564 PIRSF PIRSF004983 3 564 1.2E-191 T 28-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AL549_RS12215 83850cc1636e3802dfe9197c993b791e 126 Gene3D G3DSA:3.10.180.10 4 126 2.5E-13 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS12215 83850cc1636e3802dfe9197c993b791e 126 SUPERFAMILY SSF54593 1 125 2.28E-21 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS04935 5afe901e8bed28cf88a4e2ecb30fb0f2 364 Pfam PF00676 Dehydrogenase E1 component 36 320 4.3E-78 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 AL549_RS04935 5afe901e8bed28cf88a4e2ecb30fb0f2 364 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 8 350 3.3E-137 T 28-03-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AL549_RS04935 5afe901e8bed28cf88a4e2ecb30fb0f2 364 Gene3D G3DSA:3.40.50.970 1 351 1.4E-81 T 28-03-2018 AL549_RS04935 5afe901e8bed28cf88a4e2ecb30fb0f2 364 SUPERFAMILY SSF52518 7 352 9.4E-95 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AL549_RS05570 98a58baef1c49f9a00fa2d9e03f47d29 165 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 28-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AL549_RS05570 98a58baef1c49f9a00fa2d9e03f47d29 165 Pfam PF13353 4Fe-4S single cluster domain 12 151 3.1E-52 T 28-03-2018 AL549_RS05570 98a58baef1c49f9a00fa2d9e03f47d29 165 SUPERFAMILY SSF102114 23 117 2.75E-7 T 28-03-2018 AL549_RS05570 98a58baef1c49f9a00fa2d9e03f47d29 165 PIRSF PIRSF000368 1 165 5.2E-60 T 28-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 AL549_RS05570 98a58baef1c49f9a00fa2d9e03f47d29 165 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 151 4.9E-61 T 28-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 AL549_RS05570 98a58baef1c49f9a00fa2d9e03f47d29 165 Gene3D G3DSA:3.20.20.70 10 128 8.6E-11 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS16410 de7a529d572e695f1063adc2b3e15bee 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 2.4E-12 T 28-03-2018 IPR007140 Protein of unknown function DUF350 AL549_RS16410 de7a529d572e695f1063adc2b3e15bee 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 7.1E-11 T 28-03-2018 IPR007140 Protein of unknown function DUF350 AL549_RS17590 ec7d7b80ea46a9ab749c7684d6b9b853 339 Pfam PF06804 NlpB/DapX lipoprotein 36 335 2.9E-106 T 28-03-2018 IPR010653 NlpB/DapX lipoprotein AL549_RS17590 ec7d7b80ea46a9ab749c7684d6b9b853 339 PIRSF PIRSF026343 4 339 7.2E-128 T 28-03-2018 IPR014524 Outer membrane protein assembly factor BamC AL549_RS17590 ec7d7b80ea46a9ab749c7684d6b9b853 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 337 33.806 T 28-03-2018 IPR014524 Outer membrane protein assembly factor BamC AL549_RS15005 0f96ec7774807d343fd817ea34b39d01 122 Gene3D G3DSA:3.10.180.10 8 122 3.3E-14 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS15005 0f96ec7774807d343fd817ea34b39d01 122 SUPERFAMILY SSF54593 3 121 2.2E-18 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS15005 0f96ec7774807d343fd817ea34b39d01 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 118 1.8E-6 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL549_RS02515 48a754001059147d7d4d646aebed30d8 306 Pfam PF03466 LysR substrate binding domain 91 303 6.8E-34 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS02515 48a754001059147d7d4d646aebed30d8 306 SUPERFAMILY SSF46785 11 113 4.74E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02515 48a754001059147d7d4d646aebed30d8 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.5E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS02515 48a754001059147d7d4d646aebed30d8 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.5E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS02515 48a754001059147d7d4d646aebed30d8 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.5E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS02515 48a754001059147d7d4d646aebed30d8 306 SUPERFAMILY SSF53850 91 304 1.25E-33 T 28-03-2018 AL549_RS02515 48a754001059147d7d4d646aebed30d8 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 6.9E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS02515 48a754001059147d7d4d646aebed30d8 306 Gene3D G3DSA:3.40.190.10 87 175 2.0E-17 T 28-03-2018 AL549_RS02515 48a754001059147d7d4d646aebed30d8 306 Gene3D G3DSA:3.40.190.10 176 275 1.6E-14 T 28-03-2018 AL549_RS02515 48a754001059147d7d4d646aebed30d8 306 Gene3D G3DSA:1.10.10.10 2 86 1.0E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00280 d02c77fe2fc81e5bee4aa1ff99803241 92 Gene3D G3DSA:1.20.5.190 25 87 9.1E-10 T 28-03-2018 AL549_RS00280 d02c77fe2fc81e5bee4aa1ff99803241 92 SUPERFAMILY SSF58042 20 91 1.73E-13 T 28-03-2018 AL549_RS00280 d02c77fe2fc81e5bee4aa1ff99803241 92 PIRSF PIRSF002855 1 92 7.9E-30 T 28-03-2018 IPR016367 Murein-lipoprotein AL549_RS00280 d02c77fe2fc81e5bee4aa1ff99803241 92 Pfam PF04728 Lipoprotein leucine-zipper 33 92 9.7E-16 T 28-03-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 AL549_RS16640 e3acb1164d3a1b20e958ceffff55b6ce 153 Pfam PF05433 Glycine zipper 2TM domain 58 92 3.1E-9 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AL549_RS05670 e0967fd2fd840f4e60c8869838de2d91 464 SUPERFAMILY SSF52467 291 464 1.12E-79 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL549_RS05670 e0967fd2fd840f4e60c8869838de2d91 464 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 462 8.0E-202 T 28-03-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AL549_RS05670 e0967fd2fd840f4e60c8869838de2d91 464 PIRSF PIRSF000204 1 464 3.4E-235 T 28-03-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AL549_RS05670 e0967fd2fd840f4e60c8869838de2d91 464 Gene3D G3DSA:3.40.50.1220 291 464 4.4E-92 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL549_RS23635 3f36de8293bed63ebe176c69f442562c 255 Gene3D G3DSA:2.40.50.110 81 185 6.6E-10 T 28-03-2018 AL549_RS23635 3f36de8293bed63ebe176c69f442562c 255 Pfam PF08239 Bacterial SH3 domain 130 182 8.8E-12 T 28-03-2018 IPR003646 SH3-like domain, bacterial-type AL549_RS01550 311d474bc0ca0792e0c649627511d42d 225 Gene3D G3DSA:3.40.50.1000 25 216 4.5E-10 T 28-03-2018 IPR023214 HAD-like domain AL549_RS01550 311d474bc0ca0792e0c649627511d42d 225 Pfam PF12710 haloacid dehalogenase-like hydrolase 29 208 2.7E-30 T 28-03-2018 AL549_RS01550 311d474bc0ca0792e0c649627511d42d 225 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 28 215 1.7E-35 T 28-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AL549_RS01550 311d474bc0ca0792e0c649627511d42d 225 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 28 211 1.0E-24 T 28-03-2018 AL549_RS01550 311d474bc0ca0792e0c649627511d42d 225 SUPERFAMILY SSF56784 26 212 2.27E-20 T 28-03-2018 IPR023214 HAD-like domain AL549_RS10640 243bc89230183b173a52d8ee4b747c15 359 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 3.4E-97 T 28-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AL549_RS10640 243bc89230183b173a52d8ee4b747c15 359 SUPERFAMILY SSF52540 86 321 7.33E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS10640 243bc89230183b173a52d8ee4b747c15 359 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 334 35.693 T 28-03-2018 IPR019591 Mrp/NBP35 ATP-binding protein AL549_RS10640 243bc89230183b173a52d8ee4b747c15 359 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 28-03-2018 IPR000808 Mrp, conserved site GO:0005524 AL549_RS10640 243bc89230183b173a52d8ee4b747c15 359 Gene3D G3DSA:3.40.50.300 78 315 2.2E-63 T 28-03-2018 AL549_RS18675 42f741901e281feaa5502231a083e4d9 431 Gene3D G3DSA:3.90.1150.10 1 181 1.0E-42 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS18675 42f741901e281feaa5502231a083e4d9 431 Gene3D G3DSA:3.90.1150.10 310 431 1.1E-18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS18675 42f741901e281feaa5502231a083e4d9 431 SUPERFAMILY SSF53383 1 423 4.18E-134 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS18675 42f741901e281feaa5502231a083e4d9 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 1.5E-193 T 28-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AL549_RS18675 42f741901e281feaa5502231a083e4d9 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL549_RS18675 42f741901e281feaa5502231a083e4d9 431 Gene3D G3DSA:3.40.640.10 182 309 6.2E-47 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS18675 42f741901e281feaa5502231a083e4d9 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.237 T 28-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AL549_RS18675 42f741901e281feaa5502231a083e4d9 431 Pfam PF00202 Aminotransferase class-III 33 395 1.2E-75 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL549_RS18940 ffe83418104faa07c1a3fa28d4508a6d 117 SUPERFAMILY SSF50104 2 115 4.51E-48 T 28-03-2018 IPR008991 Translation protein SH3-like domain AL549_RS18940 ffe83418104faa07c1a3fa28d4508a6d 117 Pfam PF01245 Ribosomal protein L19 3 113 8.6E-51 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS18940 ffe83418104faa07c1a3fa28d4508a6d 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 28-03-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS18940 ffe83418104faa07c1a3fa28d4508a6d 117 PIRSF PIRSF002191 1 117 8.7E-52 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS18940 ffe83418104faa07c1a3fa28d4508a6d 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.0E-52 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS18940 ffe83418104faa07c1a3fa28d4508a6d 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.566 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS18940 ffe83418104faa07c1a3fa28d4508a6d 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 7.6E-42 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS18940 ffe83418104faa07c1a3fa28d4508a6d 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 7.6E-42 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS18940 ffe83418104faa07c1a3fa28d4508a6d 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 7.6E-42 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS14780 72624582d418c915a61f483cc828435c 69 Pfam PF11665 Protein of unknown function (DUF3265) 21 48 1.9E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS10140 5b4ef0fe3fd8dcd7b9592bd02fb6f3b4 155 SUPERFAMILY SSF51197 3 151 7.14E-38 T 28-03-2018 AL549_RS10140 5b4ef0fe3fd8dcd7b9592bd02fb6f3b4 155 Pfam PF04074 Domain of unknown function (DUF386) 4 150 3.2E-37 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family AL549_RS10140 5b4ef0fe3fd8dcd7b9592bd02fb6f3b4 155 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 2 151 6.9E-36 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family AL549_RS10140 5b4ef0fe3fd8dcd7b9592bd02fb6f3b4 155 Gene3D G3DSA:2.60.120.370 1 155 2.5E-39 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family AL549_RS16140 522720311dfb9d5d35c708bc36dbc8c5 451 SUPERFAMILY SSF55874 322 443 3.01E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS16140 522720311dfb9d5d35c708bc36dbc8c5 451 SMART SM00387 353 447 3.5E-5 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS16140 522720311dfb9d5d35c708bc36dbc8c5 451 PIRSF PIRSF037314 1 451 3.1E-184 T 28-03-2018 IPR017171 Signal transduction histidine kinase, MctS AL549_RS16140 522720311dfb9d5d35c708bc36dbc8c5 451 Pfam PF07730 Histidine kinase 250 315 1.2E-14 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AL549_RS16140 522720311dfb9d5d35c708bc36dbc8c5 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 445 2.5E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS16140 522720311dfb9d5d35c708bc36dbc8c5 451 SMART SM01049 42 133 2.1E-33 T 28-03-2018 IPR033480 Single Cache domain 2 AL549_RS16140 522720311dfb9d5d35c708bc36dbc8c5 451 Pfam PF17200 Single Cache domain 2 45 192 2.0E-45 T 28-03-2018 IPR033480 Single Cache domain 2 AL549_RS16140 522720311dfb9d5d35c708bc36dbc8c5 451 Gene3D G3DSA:3.30.450.20 25 206 2.4E-55 T 28-03-2018 AL549_RS16140 522720311dfb9d5d35c708bc36dbc8c5 451 Gene3D G3DSA:3.30.565.10 312 449 1.9E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS16900 42155c060adb5f5d4fc70be7da1f6f18 480 SUPERFAMILY SSF48452 220 277 1.01E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS16900 42155c060adb5f5d4fc70be7da1f6f18 480 SUPERFAMILY SSF48452 136 176 1.01E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS16900 42155c060adb5f5d4fc70be7da1f6f18 480 Gene3D G3DSA:1.25.40.10 56 295 5.1E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS21305 d94be658812392ca75e02d2d71750ed7 238 SUPERFAMILY SSF56784 10 236 8.41E-34 T 28-03-2018 IPR023214 HAD-like domain AL549_RS21305 d94be658812392ca75e02d2d71750ed7 238 Gene3D G3DSA:3.40.50.1000 1 238 1.0E-21 T 28-03-2018 IPR023214 HAD-like domain AL549_RS21305 d94be658812392ca75e02d2d71750ed7 238 Pfam PF00702 haloacid dehalogenase-like hydrolase 11 194 4.3E-11 T 28-03-2018 AL549_RS21305 d94be658812392ca75e02d2d71750ed7 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 127 198 2.3E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS18115 3144eac66b3e54401b5ca65a215a0564 445 Gene3D G3DSA:3.40.1160.10 6 297 1.2E-55 T 28-03-2018 AL549_RS18115 3144eac66b3e54401b5ca65a215a0564 445 Pfam PF00583 Acetyltransferase (GNAT) family 331 416 4.5E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS18115 3144eac66b3e54401b5ca65a215a0564 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 224.77 T 28-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AL549_RS18115 3144eac66b3e54401b5ca65a215a0564 445 PIRSF PIRSF000423 1 445 7.9E-205 T 28-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AL549_RS18115 3144eac66b3e54401b5ca65a215a0564 445 SUPERFAMILY SSF55729 300 424 2.3E-18 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS18115 3144eac66b3e54401b5ca65a215a0564 445 SUPERFAMILY SSF53633 4 294 3.63E-66 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL549_RS18115 3144eac66b3e54401b5ca65a215a0564 445 Pfam PF00696 Amino acid kinase family 25 270 6.0E-27 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL549_RS18115 3144eac66b3e54401b5ca65a215a0564 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 445 4.7E-207 T 28-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AL549_RS18115 3144eac66b3e54401b5ca65a215a0564 445 Gene3D G3DSA:3.40.630.30 300 443 1.9E-18 T 28-03-2018 AL549_RS05245 3ec1aab58f5fced0d3012b3013434c62 471 Gene3D G3DSA:2.80.10.50 334 469 6.2E-21 T 28-03-2018 AL549_RS05245 3ec1aab58f5fced0d3012b3013434c62 471 SMART SM00458 338 465 2.4E-30 T 28-03-2018 IPR000772 Ricin B, lectin domain AL549_RS05245 3ec1aab58f5fced0d3012b3013434c62 471 Pfam PF07968 Leukocidin/Hemolysin toxin family 71 331 7.1E-66 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 AL549_RS05245 3ec1aab58f5fced0d3012b3013434c62 471 Pfam PF00652 Ricin-type beta-trefoil lectin domain 339 429 1.6E-12 T 28-03-2018 IPR000772 Ricin B, lectin domain AL549_RS05245 3ec1aab58f5fced0d3012b3013434c62 471 SUPERFAMILY SSF56959 127 331 1.18E-7 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 AL549_RS05245 3ec1aab58f5fced0d3012b3013434c62 471 Gene3D G3DSA:2.70.240.10 94 332 7.5E-50 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 AL549_RS05245 3ec1aab58f5fced0d3012b3013434c62 471 SUPERFAMILY SSF50370 334 462 3.93E-18 T 28-03-2018 IPR000772 Ricin B, lectin domain AL549_RS22620 079e3370009e99244106bb483f980647 210 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 132 209 2.1E-11 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL549_RS22620 079e3370009e99244106bb483f980647 210 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 130 208 5.6E-15 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL549_RS22620 079e3370009e99244106bb483f980647 210 Gene3D G3DSA:3.30.1150.10 45 210 2.9E-15 T 28-03-2018 AL549_RS22620 079e3370009e99244106bb483f980647 210 SUPERFAMILY SSF74653 121 207 1.01E-17 T 28-03-2018 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 694 8.0E-30 T 28-03-2018 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 SUPERFAMILY SSF56784 500 519 1.06E-48 T 28-03-2018 IPR023214 HAD-like domain AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 SUPERFAMILY SSF56784 554 781 1.06E-48 T 28-03-2018 IPR023214 HAD-like domain AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 783 2.0E-162 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 PRINTS PR00943 Copper-transporting ATPase signature 276 295 1.7E-5 T 28-03-2018 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 PRINTS PR00943 Copper-transporting ATPase signature 296 314 1.7E-5 T 28-03-2018 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 PRINTS PR00943 Copper-transporting ATPase signature 135 155 1.7E-5 T 28-03-2018 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 PRINTS PR00943 Copper-transporting ATPase signature 659 676 1.7E-5 T 28-03-2018 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 Gene3D G3DSA:1.20.1110.10 638 777 7.3E-25 T 28-03-2018 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 Pfam PF00122 E1-E2 ATPase 318 478 9.5E-45 T 28-03-2018 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 Gene3D G3DSA:1.20.1110.10 245 513 1.2E-32 T 28-03-2018 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 ProSitePatterns PS01229 Hypothetical cof family signature 2. 681 703 - T 28-03-2018 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 SUPERFAMILY SSF55008 84 162 1.96E-17 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 Pfam PF00403 Heavy-metal-associated domain 96 154 2.3E-10 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 Gene3D G3DSA:3.40.1110.10 514 637 3.1E-25 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 3.7E-24 T 28-03-2018 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 681 700 3.7E-24 T 28-03-2018 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 716 3.7E-24 T 28-03-2018 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 3.7E-24 T 28-03-2018 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 3.7E-24 T 28-03-2018 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 783 6.2E-154 T 28-03-2018 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 4.3E-27 T 28-03-2018 IPR021993 Putative metal-binding domain of cation transport ATPase AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 SUPERFAMILY SSF81653 318 402 2.09E-23 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 274 785 1.5E-124 T 28-03-2018 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 761 1.0E-72 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 SUPERFAMILY SSF81665 251 306 6.67E-11 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 SUPERFAMILY SSF81665 726 765 6.67E-11 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 SUPERFAMILY SSF81665 404 495 6.67E-11 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL549_RS12520 8e90c176440fc88bff3a4c246982279c 789 Gene3D G3DSA:3.30.70.100 90 162 8.6E-14 T 28-03-2018 AL549_RS19895 01bb6a6f7450539703d7648b8acb1cd1 449 SUPERFAMILY SSF55021 377 448 6.3E-13 T 28-03-2018 AL549_RS19895 01bb6a6f7450539703d7648b8acb1cd1 449 Gene3D G3DSA:3.40.1160.10 1 284 4.8E-65 T 28-03-2018 AL549_RS19895 01bb6a6f7450539703d7648b8acb1cd1 449 SUPERFAMILY SSF53633 5 293 1.96E-76 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL549_RS19895 01bb6a6f7450539703d7648b8acb1cd1 449 PIRSF PIRSF000726 2 449 1.9E-129 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS19895 01bb6a6f7450539703d7648b8acb1cd1 449 Gene3D G3DSA:3.30.70.260 285 374 9.1E-22 T 28-03-2018 AL549_RS19895 01bb6a6f7450539703d7648b8acb1cd1 449 Gene3D G3DSA:3.30.70.260 375 448 1.8E-14 T 28-03-2018 AL549_RS19895 01bb6a6f7450539703d7648b8acb1cd1 449 Pfam PF00696 Amino acid kinase family 5 278 7.6E-48 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL549_RS19895 01bb6a6f7450539703d7648b8acb1cd1 449 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 4 448 3.2E-124 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS19895 01bb6a6f7450539703d7648b8acb1cd1 449 SUPERFAMILY SSF55021 297 394 3.08E-20 T 28-03-2018 AL549_RS19895 01bb6a6f7450539703d7648b8acb1cd1 449 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS19895 01bb6a6f7450539703d7648b8acb1cd1 449 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 4 448 1.2E-123 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS14945 d82d590e3fdad54e3c4a866a9e0312b6 80 Gene3D G3DSA:3.40.1620.10 1 48 4.2E-13 T 28-03-2018 AL549_RS14945 d82d590e3fdad54e3c4a866a9e0312b6 80 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 64 5.5E-12 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL549_RS14945 d82d590e3fdad54e3c4a866a9e0312b6 80 SUPERFAMILY SSF143120 1 76 2.49E-15 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL549_RS14945 d82d590e3fdad54e3c4a866a9e0312b6 80 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 53 1.5E-14 T 28-03-2018 AL549_RS07160 5b678af11c2837d06a4b4759938621a6 459 SUPERFAMILY SSF55073 299 455 2.82E-44 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS07160 5b678af11c2837d06a4b4759938621a6 459 Gene3D G3DSA:3.30.70.270 288 458 5.3E-52 T 28-03-2018 AL549_RS07160 5b678af11c2837d06a4b4759938621a6 459 Pfam PF03924 CHASE domain 109 221 4.0E-13 T 28-03-2018 IPR006189 CHASE domain AL549_RS07160 5b678af11c2837d06a4b4759938621a6 459 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 453 6.4E-44 T 28-03-2018 IPR000160 GGDEF domain AL549_RS07160 5b678af11c2837d06a4b4759938621a6 459 SMART SM01079 47 223 9.1E-29 T 28-03-2018 IPR006189 CHASE domain AL549_RS07160 5b678af11c2837d06a4b4759938621a6 459 SMART SM00267 283 458 7.2E-48 T 28-03-2018 IPR000160 GGDEF domain AL549_RS07160 5b678af11c2837d06a4b4759938621a6 459 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 293 454 1.6E-44 T 28-03-2018 IPR000160 GGDEF domain AL549_RS11775 be0d1989d484c395a7629f1d532f2755 244 Pfam PF14559 Tetratricopeptide repeat 152 199 1.2E-6 T 28-03-2018 AL549_RS11775 be0d1989d484c395a7629f1d532f2755 244 SUPERFAMILY SSF48452 38 199 1.29E-21 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS11775 be0d1989d484c395a7629f1d532f2755 244 Gene3D G3DSA:1.25.40.10 26 87 4.0E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS11775 be0d1989d484c395a7629f1d532f2755 244 Gene3D G3DSA:1.25.40.10 88 121 6.2E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS11775 be0d1989d484c395a7629f1d532f2755 244 Gene3D G3DSA:1.25.40.10 122 243 1.4E-16 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS11775 be0d1989d484c395a7629f1d532f2755 244 Pfam PF13431 Tetratricopeptide repeat 94 125 1.4E-7 T 28-03-2018 AL549_RS11775 be0d1989d484c395a7629f1d532f2755 244 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 240 1.3E-87 T 28-03-2018 IPR013360 Pilus biogenesis/stability type IV, PilW AL549_RS11775 be0d1989d484c395a7629f1d532f2755 244 SMART SM00028 38 71 33.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS11775 be0d1989d484c395a7629f1d532f2755 244 SMART SM00028 106 139 41.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS11775 be0d1989d484c395a7629f1d532f2755 244 SMART SM00028 142 175 4.3 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS11775 be0d1989d484c395a7629f1d532f2755 244 SMART SM00028 72 105 0.65 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS07280 df321d9c2d977a17aa4087cca0516353 307 SUPERFAMILY SSF52172 171 293 5.55E-21 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS07280 df321d9c2d977a17aa4087cca0516353 307 SUPERFAMILY SSF50341 11 152 1.57E-29 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS07280 df321d9c2d977a17aa4087cca0516353 307 Gene3D G3DSA:3.40.50.2300 161 307 1.9E-20 T 28-03-2018 AL549_RS07280 df321d9c2d977a17aa4087cca0516353 307 Pfam PF00072 Response regulator receiver domain 175 289 7.2E-14 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS07280 df321d9c2d977a17aa4087cca0516353 307 Pfam PF01584 CheW-like domain 14 149 3.2E-30 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS07280 df321d9c2d977a17aa4087cca0516353 307 PIRSF PIRSF002867 1 298 3.2E-87 T 28-03-2018 IPR024181 Chemotaxis response regulator CheV AL549_RS07280 df321d9c2d977a17aa4087cca0516353 307 SMART SM00260 11 147 4.1E-18 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL549_RS07280 df321d9c2d977a17aa4087cca0516353 307 Gene3D G3DSA:2.40.50.180 31 97 4.4E-11 T 28-03-2018 AL549_RS07280 df321d9c2d977a17aa4087cca0516353 307 Gene3D G3DSA:2.30.30.40 98 141 1.3E-8 T 28-03-2018 AL549_RS07280 df321d9c2d977a17aa4087cca0516353 307 SMART SM00448 173 290 1.4E-15 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS20095 2ed84ad5fc332770fb85375550e3fb6c 594 Pfam PF00263 Bacterial type II and III secretion system protein 434 592 1.9E-45 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 AL549_RS20095 2ed84ad5fc332770fb85375550e3fb6c 594 Pfam PF07660 Secretin and TonB N terminus short domain 186 234 8.7E-7 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL549_RS20095 2ed84ad5fc332770fb85375550e3fb6c 594 PRINTS PR00811 Bacterial general secretion pathway protein D signature 430 454 9.4E-21 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS20095 2ed84ad5fc332770fb85375550e3fb6c 594 PRINTS PR00811 Bacterial general secretion pathway protein D signature 557 575 9.4E-21 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS20095 2ed84ad5fc332770fb85375550e3fb6c 594 PRINTS PR00811 Bacterial general secretion pathway protein D signature 465 475 9.4E-21 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS20095 2ed84ad5fc332770fb85375550e3fb6c 594 PRINTS PR00811 Bacterial general secretion pathway protein D signature 325 335 9.4E-21 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS20095 2ed84ad5fc332770fb85375550e3fb6c 594 PRINTS PR00811 Bacterial general secretion pathway protein D signature 580 594 9.4E-21 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS20095 2ed84ad5fc332770fb85375550e3fb6c 594 SMART SM00965 186 234 7.2E-10 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL549_RS20095 2ed84ad5fc332770fb85375550e3fb6c 594 Pfam PF03958 Bacterial type II/III secretion system short domain 260 325 1.6E-11 T 28-03-2018 IPR005644 NolW-like AL549_RS20095 2ed84ad5fc332770fb85375550e3fb6c 594 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 161 592 2.2E-162 T 28-03-2018 IPR013355 Type IV pilus secretin PilQ AL549_RS20095 2ed84ad5fc332770fb85375550e3fb6c 594 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 538 571 - T 28-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AL549_RS03540 57f749acaa48df6f53baa8df3aa280ab 455 Gene3D G3DSA:1.20.1600.10 26 441 7.6E-43 T 28-03-2018 AL549_RS03540 57f749acaa48df6f53baa8df3aa280ab 455 Pfam PF02321 Outer membrane efflux protein 258 436 1.2E-14 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL549_RS03540 57f749acaa48df6f53baa8df3aa280ab 455 Pfam PF02321 Outer membrane efflux protein 42 221 3.1E-9 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL549_RS03540 57f749acaa48df6f53baa8df3aa280ab 455 SUPERFAMILY SSF56954 3 438 3.79E-50 T 28-03-2018 AL549_RS03585 33d77671094c6b40ee7b204e44b38cc7 80 Gene3D G3DSA:1.10.1200.10 3 78 1.9E-12 T 28-03-2018 AL549_RS03585 33d77671094c6b40ee7b204e44b38cc7 80 Pfam PF00550 Phosphopantetheine attachment site 10 68 7.3E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL549_RS03585 33d77671094c6b40ee7b204e44b38cc7 80 ProSitePatterns PS00012 Phosphopantetheine attachment site. 33 48 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AL549_RS03585 33d77671094c6b40ee7b204e44b38cc7 80 SUPERFAMILY SSF47336 10 75 4.19E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL549_RS01150 c6a0d4d48b4046eb1cc9d897ca29c27c 99 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 87 1.7E-32 T 28-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AL549_RS01150 c6a0d4d48b4046eb1cc9d897ca29c27c 99 Gene3D G3DSA:3.40.50.2300 2 96 3.6E-36 T 28-03-2018 AL549_RS01150 c6a0d4d48b4046eb1cc9d897ca29c27c 99 SUPERFAMILY SSF52794 2 94 1.31E-32 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS01150 c6a0d4d48b4046eb1cc9d897ca29c27c 99 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 2.8E-16 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS17825 87875dc3a4b62581c2780da53759cbf8 185 SUPERFAMILY SSF55194 2 184 2.35E-71 T 28-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AL549_RS17825 87875dc3a4b62581c2780da53759cbf8 185 Gene3D G3DSA:1.10.132.20 75 184 1.1E-38 T 28-03-2018 AL549_RS17825 87875dc3a4b62581c2780da53759cbf8 185 Gene3D G3DSA:1.10.132.20 2 74 1.6E-12 T 28-03-2018 AL549_RS17825 87875dc3a4b62581c2780da53759cbf8 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 4.4E-76 T 28-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AL549_RS17825 87875dc3a4b62581c2780da53759cbf8 185 Pfam PF01765 Ribosome recycling factor 20 183 4.2E-63 T 28-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AL549_RS17825 87875dc3a4b62581c2780da53759cbf8 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.615 T 28-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AL549_RS03495 a081c87076913703a9b4d107d941c46f 232 Gene3D G3DSA:2.40.160.20 10 152 2.0E-4 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS03495 a081c87076913703a9b4d107d941c46f 232 Gene3D G3DSA:2.40.160.20 153 231 0.23 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS21510 500ef5aab101f380445c06df1e298162 312 Gene3D G3DSA:1.10.3720.10 19 299 6.0E-48 T 28-03-2018 AL549_RS21510 500ef5aab101f380445c06df1e298162 312 SUPERFAMILY SSF161098 93 294 2.62E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS21510 500ef5aab101f380445c06df1e298162 312 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 69 1.0E-9 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL549_RS21510 500ef5aab101f380445c06df1e298162 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 309 4.0E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS09555 b8e4ebbfc160eea255179833f6c04560 198 Pfam PF06185 YecM protein 12 196 8.3E-71 T 28-03-2018 IPR010393 Protein of unknown function DUF991 AL549_RS09555 b8e4ebbfc160eea255179833f6c04560 198 Gene3D G3DSA:3.10.180.10 9 197 3.6E-71 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS09555 b8e4ebbfc160eea255179833f6c04560 198 SUPERFAMILY SSF54593 3 197 2.81E-70 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS22665 6258fa746fc3c93323bf574b31245cff 283 SUPERFAMILY SSF52540 1 251 5.99E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS22665 6258fa746fc3c93323bf574b31245cff 283 Gene3D G3DSA:3.40.50.300 1 280 3.4E-73 T 28-03-2018 AL549_RS22665 6258fa746fc3c93323bf574b31245cff 283 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS22665 6258fa746fc3c93323bf574b31245cff 283 SMART SM00382 29 238 2.3E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS22665 6258fa746fc3c93323bf574b31245cff 283 Pfam PF00005 ABC transporter 20 180 1.8E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS04525 0f40efc997cf743350afc22f6c2d024d 350 PIRSF PIRSF001361 1 350 1.1E-162 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL549_RS04525 0f40efc997cf743350afc22f6c2d024d 350 Gene3D G3DSA:3.20.20.70 7 350 3.0E-135 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS04525 0f40efc997cf743350afc22f6c2d024d 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 1.2E-170 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL549_RS04525 0f40efc997cf743350afc22f6c2d024d 350 SUPERFAMILY SSF51569 6 347 1.47E-139 T 28-03-2018 AL549_RS04525 0f40efc997cf743350afc22f6c2d024d 350 Pfam PF00793 DAHP synthetase I family 38 337 2.1E-108 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL549_RS05015 7e7edd8af64c4067a7a022b3e7ab83c7 101 Pfam PF14375 Cysteine-rich CWC 53 96 7.0E-6 T 28-03-2018 IPR032720 Cysteine-rich CWC AL549_RS05015 7e7edd8af64c4067a7a022b3e7ab83c7 101 Pfam PF06945 Protein of unknown function (DUF1289) 3 47 2.3E-16 T 28-03-2018 IPR010710 Protein of unknown function DUF1289 AL549_RS18995 16908d1bd37058f93f348d1ff67e4447 153 Pfam PF09335 SNARE associated Golgi protein 54 148 6.9E-10 T 28-03-2018 IPR032816 SNARE associated Golgi protein AL549_RS21655 81370482c980df4f59e60610f63d661d 326 Pfam PF00107 Zinc-binding dehydrogenase 159 272 5.3E-11 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL549_RS21655 81370482c980df4f59e60610f63d661d 326 Gene3D G3DSA:3.90.180.10 1 140 4.3E-26 T 28-03-2018 AL549_RS21655 81370482c980df4f59e60610f63d661d 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 4 326 2.1E-137 T 28-03-2018 IPR014188 Acrylyl-CoA reductase AcuI AL549_RS21655 81370482c980df4f59e60610f63d661d 326 SUPERFAMILY SSF51735 116 289 6.33E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS21655 81370482c980df4f59e60610f63d661d 326 Gene3D G3DSA:3.40.50.720 141 294 1.5E-19 T 28-03-2018 AL549_RS21655 81370482c980df4f59e60610f63d661d 326 SUPERFAMILY SSF50129 2 144 1.98E-44 T 28-03-2018 IPR011032 GroES-like AL549_RS21655 81370482c980df4f59e60610f63d661d 326 SMART SM00829 13 324 4.0E-5 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL549_RS06620 8aa2841732f3f0f3119a3c9302533a4d 1021 Gene3D G3DSA:1.20.5.170 742 838 5.6E-4 T 28-03-2018 AL549_RS06620 8aa2841732f3f0f3119a3c9302533a4d 1021 Gene3D G3DSA:3.40.50.300 862 1003 6.6E-10 T 28-03-2018 AL549_RS06620 8aa2841732f3f0f3119a3c9302533a4d 1021 Gene3D G3DSA:1.20.1170.10 363 642 0.0099 T 28-03-2018 AL549_RS06620 8aa2841732f3f0f3119a3c9302533a4d 1021 SUPERFAMILY SSF52540 905 1000 2.17E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06620 8aa2841732f3f0f3119a3c9302533a4d 1021 SUPERFAMILY SSF52540 26 228 2.17E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06620 8aa2841732f3f0f3119a3c9302533a4d 1021 Gene3D G3DSA:3.40.50.300 1 195 1.5E-22 T 28-03-2018 AL549_RS06620 8aa2841732f3f0f3119a3c9302533a4d 1021 Pfam PF13476 AAA domain 5 237 2.0E-24 T 28-03-2018 AL549_RS06620 8aa2841732f3f0f3119a3c9302533a4d 1021 Pfam PF13558 Putative exonuclease SbcCD, C subunit 909 971 8.0E-12 T 28-03-2018 AL549_RS06620 8aa2841732f3f0f3119a3c9302533a4d 1021 Gene3D G3DSA:1.20.5.730 643 715 6.4E-4 T 28-03-2018 AL549_RS14430 039972131069b1bc2579ba0d7bb5aac1 266 SMART SM00507 179 243 2.5E-5 T 28-03-2018 IPR003615 HNH nuclease AL549_RS14430 039972131069b1bc2579ba0d7bb5aac1 266 Pfam PF01844 HNH endonuclease 192 247 5.2E-7 T 28-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AL549_RS14430 039972131069b1bc2579ba0d7bb5aac1 266 Gene3D G3DSA:3.40.1800.10 170 259 1.1E-11 T 28-03-2018 AL549_RS04760 3542b740d5fade27648e0793337cd6d6 343 SUPERFAMILY SSF50129 5 144 1.7E-42 T 28-03-2018 IPR011032 GroES-like AL549_RS04760 3542b740d5fade27648e0793337cd6d6 343 Pfam PF00107 Zinc-binding dehydrogenase 159 287 2.6E-22 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL549_RS04760 3542b740d5fade27648e0793337cd6d6 343 Pfam PF16884 N-terminal domain of oxidoreductase 7 113 2.2E-41 T 28-03-2018 AL549_RS04760 3542b740d5fade27648e0793337cd6d6 343 Gene3D G3DSA:3.40.50.720 150 280 1.7E-29 T 28-03-2018 AL549_RS04760 3542b740d5fade27648e0793337cd6d6 343 SUPERFAMILY SSF51735 124 304 2.18E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS04760 3542b740d5fade27648e0793337cd6d6 343 SMART SM00829 20 337 6.5E-6 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL549_RS04760 3542b740d5fade27648e0793337cd6d6 343 Gene3D G3DSA:3.90.180.10 1 149 7.0E-31 T 28-03-2018 AL549_RS05125 bd505caad08a4954150489b8aa8d10f7 159 SUPERFAMILY SSF141452 4 157 1.83E-35 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AL549_RS05125 bd505caad08a4954150489b8aa8d10f7 159 Gene3D G3DSA:2.30.110.20 2 159 1.7E-34 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AL549_RS05125 bd505caad08a4954150489b8aa8d10f7 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 133 4.1E-28 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AL549_RS02845 fa9f83e78abce8473ffb45801fef51a5 400 Pfam PF01266 FAD dependent oxidoreductase 3 393 3.3E-66 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL549_RS02845 fa9f83e78abce8473ffb45801fef51a5 400 SUPERFAMILY SSF51905 2 302 6.91E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS02845 fa9f83e78abce8473ffb45801fef51a5 400 Gene3D G3DSA:3.30.9.10 86 197 2.2E-16 T 28-03-2018 AL549_RS02845 fa9f83e78abce8473ffb45801fef51a5 400 Gene3D G3DSA:3.30.9.10 204 355 5.4E-15 T 28-03-2018 AL549_RS02845 fa9f83e78abce8473ffb45801fef51a5 400 Gene3D G3DSA:3.50.50.60 2 85 0.0018 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS00040 5c59eed7a10825d5b15f65709fc867e1 342 Gene3D G3DSA:3.20.20.140 10 342 7.4E-59 T 28-03-2018 AL549_RS00040 5c59eed7a10825d5b15f65709fc867e1 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 28-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS00040 5c59eed7a10825d5b15f65709fc867e1 342 Pfam PF01979 Amidohydrolase family 11 317 7.2E-17 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL549_RS00040 5c59eed7a10825d5b15f65709fc867e1 342 PIRSF PIRSF001237 1 342 1.4E-143 T 28-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS00040 5c59eed7a10825d5b15f65709fc867e1 342 SUPERFAMILY SSF51556 1 342 6.81E-147 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL549_RS00040 5c59eed7a10825d5b15f65709fc867e1 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 28-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS00040 5c59eed7a10825d5b15f65709fc867e1 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 44.156 T 28-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS00040 5c59eed7a10825d5b15f65709fc867e1 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 1.3E-139 T 28-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL549_RS10280 91379f31d8e9bf2a4e82e0918134e86e 355 Pfam PF03116 NQR2, RnfD, RnfE family 6 354 4.9E-105 T 28-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 AL549_RS10280 91379f31d8e9bf2a4e82e0918134e86e 355 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 355 3.6E-138 T 28-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 AL549_RS10280 91379f31d8e9bf2a4e82e0918134e86e 355 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 355 27.43 T 28-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 AL549_RS11180 b61f5e7138c8735641bdbe3779d3f9b3 212 Gene3D G3DSA:3.40.50.620 14 147 9.8E-29 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS11180 b61f5e7138c8735641bdbe3779d3f9b3 212 Pfam PF02698 DUF218 domain 33 147 9.4E-23 T 28-03-2018 IPR003848 Domain of unknown function DUF218 AL549_RS02655 d2262a6d107f5f4826ee66f02854cfb5 258 Pfam PF03609 PTS system sorbose-specific iic component 5 236 3.2E-72 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AL549_RS17675 8a61524c235f9006c57201876cdf6f0a 815 Gene3D G3DSA:1.20.140.10 361 510 9.1E-20 T 28-03-2018 AL549_RS17675 8a61524c235f9006c57201876cdf6f0a 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 2.9E-13 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL549_RS17675 8a61524c235f9006c57201876cdf6f0a 815 SUPERFAMILY SSF47203 361 508 5.48E-22 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL549_RS17675 8a61524c235f9006c57201876cdf6f0a 815 Gene3D G3DSA:1.10.540.10 77 236 1.3E-30 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL549_RS17675 8a61524c235f9006c57201876cdf6f0a 815 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 1.1E-113 T 28-03-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 AL549_RS17675 8a61524c235f9006c57201876cdf6f0a 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 145 234 4.9E-16 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL549_RS17675 8a61524c235f9006c57201876cdf6f0a 815 Gene3D G3DSA:2.40.110.10 237 359 1.3E-15 T 28-03-2018 AL549_RS17675 8a61524c235f9006c57201876cdf6f0a 815 SUPERFAMILY SSF56645 122 356 2.62E-42 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL549_RS15635 4a5b4dfd5cce1593a09c8788360fd50a 465 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 6 49 4.5E-7 T 28-03-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AL549_RS15635 4a5b4dfd5cce1593a09c8788360fd50a 465 Pfam PF00092 von Willebrand factor type A domain 129 189 4.1E-5 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS15635 4a5b4dfd5cce1593a09c8788360fd50a 465 Gene3D G3DSA:3.40.50.410 120 463 2.8E-30 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS15635 4a5b4dfd5cce1593a09c8788360fd50a 465 SUPERFAMILY SSF53300 118 181 4.04E-17 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS15635 4a5b4dfd5cce1593a09c8788360fd50a 465 SUPERFAMILY SSF53300 316 459 4.04E-17 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS21365 f411e60c279ea399c5344ffec428067a 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 370 4.3E-6 T 28-03-2018 AL549_RS21365 f411e60c279ea399c5344ffec428067a 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.3E-6 T 28-03-2018 AL549_RS21365 f411e60c279ea399c5344ffec428067a 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 4.3E-6 T 28-03-2018 AL549_RS21365 f411e60c279ea399c5344ffec428067a 395 Gene3D G3DSA:1.10.8.260 271 322 6.2E-14 T 28-03-2018 IPR023166 HI0933 insert-like domain AL549_RS21365 f411e60c279ea399c5344ffec428067a 395 Gene3D G3DSA:3.50.50.60 2 196 2.8E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS21365 f411e60c279ea399c5344ffec428067a 395 SUPERFAMILY SSF51905 1 189 1.59E-59 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS21365 f411e60c279ea399c5344ffec428067a 395 SUPERFAMILY SSF51905 338 395 1.59E-59 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS21365 f411e60c279ea399c5344ffec428067a 395 Gene3D G3DSA:2.40.30.10 197 270 1.9E-22 T 28-03-2018 AL549_RS21365 f411e60c279ea399c5344ffec428067a 395 Pfam PF03486 HI0933-like protein 5 393 7.1E-157 T 28-03-2018 AL549_RS21365 f411e60c279ea399c5344ffec428067a 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 1.2E-8 T 28-03-2018 AL549_RS21365 f411e60c279ea399c5344ffec428067a 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 1.2E-8 T 28-03-2018 AL549_RS21365 f411e60c279ea399c5344ffec428067a 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.2E-8 T 28-03-2018 AL549_RS21365 f411e60c279ea399c5344ffec428067a 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 393 8.5E-133 T 28-03-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AL549_RS21365 f411e60c279ea399c5344ffec428067a 395 SUPERFAMILY SSF160996 191 339 9.29E-44 T 28-03-2018 AL549_RS15665 3b7bb905882703b18692f58a87c88d81 430 Pfam PF00437 Type II/IV secretion system protein 84 360 3.6E-82 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL549_RS15665 3b7bb905882703b18692f58a87c88d81 430 Gene3D G3DSA:3.30.450.90 79 182 1.1E-34 T 28-03-2018 AL549_RS15665 3b7bb905882703b18692f58a87c88d81 430 SUPERFAMILY SSF52540 61 366 3.98E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS15665 3b7bb905882703b18692f58a87c88d81 430 Gene3D G3DSA:3.40.50.300 210 394 4.7E-18 T 28-03-2018 AL549_RS19275 451fbf2b00036334f59832a74f0a8147 191 SUPERFAMILY SSF101327 6 178 6.41E-47 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 AL549_RS19275 451fbf2b00036334f59832a74f0a8147 191 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 189 35.62 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 AL549_RS19275 451fbf2b00036334f59832a74f0a8147 191 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 23 169 1.3E-10 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 AL549_RS19275 451fbf2b00036334f59832a74f0a8147 191 Pfam PF03695 Uncharacterised protein family (UPF0149) 15 179 2.2E-35 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 AL549_RS18350 0c5d264e79d3ea9c8511c1564e09e01b 248 Gene3D G3DSA:3.90.1210.10 42 109 3.9E-12 T 28-03-2018 AL549_RS18350 0c5d264e79d3ea9c8511c1564e09e01b 248 Pfam PF08666 SAF domain 45 105 1.0E-7 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL549_RS18350 0c5d264e79d3ea9c8511c1564e09e01b 248 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 225 8.9E-74 T 28-03-2018 IPR017592 Pilus assembly, Flp-type CpaB AL549_RS18350 0c5d264e79d3ea9c8511c1564e09e01b 248 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 113 215 5.4E-29 T 28-03-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain AL549_RS18350 0c5d264e79d3ea9c8511c1564e09e01b 248 SMART SM00858 44 106 3.6E-7 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL549_RS17080 76678e7f30a65afe4443725e7899a234 525 PRINTS PR00113 Alkaline phosphatase signature 122 142 6.5E-38 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL549_RS17080 76678e7f30a65afe4443725e7899a234 525 PRINTS PR00113 Alkaline phosphatase signature 166 176 6.5E-38 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL549_RS17080 76678e7f30a65afe4443725e7899a234 525 PRINTS PR00113 Alkaline phosphatase signature 26 46 6.5E-38 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL549_RS17080 76678e7f30a65afe4443725e7899a234 525 PRINTS PR00113 Alkaline phosphatase signature 85 100 6.5E-38 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL549_RS17080 76678e7f30a65afe4443725e7899a234 525 PRINTS PR00113 Alkaline phosphatase signature 267 296 6.5E-38 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL549_RS17080 76678e7f30a65afe4443725e7899a234 525 ProSitePatterns PS00123 Alkaline phosphatase active site. 85 93 - T 28-03-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL549_RS17080 76678e7f30a65afe4443725e7899a234 525 SMART SM00098 27 415 4.8E-53 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL549_RS17080 76678e7f30a65afe4443725e7899a234 525 Pfam PF00245 Alkaline phosphatase 26 503 3.6E-83 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL549_RS17080 76678e7f30a65afe4443725e7899a234 525 SUPERFAMILY SSF53649 11 401 6.07E-112 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS17080 76678e7f30a65afe4443725e7899a234 525 SUPERFAMILY SSF53649 466 504 6.07E-112 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS17080 76678e7f30a65afe4443725e7899a234 525 Gene3D G3DSA:3.40.720.10 11 525 2.0E-120 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS17985 346e0b3faa72f6c8cbe805fbcfeec015 354 SUPERFAMILY SSF56672 4 238 1.6E-93 T 28-03-2018 AL549_RS17985 346e0b3faa72f6c8cbe805fbcfeec015 354 Gene3D G3DSA:1.10.150.20 176 242 5.8E-17 T 28-03-2018 AL549_RS17985 346e0b3faa72f6c8cbe805fbcfeec015 354 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 341 4.9E-6 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL549_RS17985 346e0b3faa72f6c8cbe805fbcfeec015 354 SUPERFAMILY SSF100879 245 353 3.14E-24 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL549_RS17985 346e0b3faa72f6c8cbe805fbcfeec015 354 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 37.211 T 28-03-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AL549_RS17985 346e0b3faa72f6c8cbe805fbcfeec015 354 Gene3D G3DSA:3.30.1490.100 243 354 1.8E-18 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL549_RS17985 346e0b3faa72f6c8cbe805fbcfeec015 354 Pfam PF00817 impB/mucB/samB family 11 158 3.6E-49 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL549_RS17985 346e0b3faa72f6c8cbe805fbcfeec015 354 Gene3D G3DSA:3.30.70.270 120 175 7.2E-21 T 28-03-2018 AL549_RS17985 346e0b3faa72f6c8cbe805fbcfeec015 354 Gene3D G3DSA:3.30.70.270 45 119 3.7E-26 T 28-03-2018 AL549_RS12800 0312e6b483e5545b5e2168485305f3b1 183 Gene3D G3DSA:3.40.1000.10 25 180 1.4E-9 T 28-03-2018 AL549_RS18930 d4e705538048b1168d234ba6eff3ae7b 246 Pfam PF07072 Cell division protein 18 224 2.2E-76 T 28-03-2018 IPR009777 Cell division protein ZapD AL549_RS18930 d4e705538048b1168d234ba6eff3ae7b 246 Gene3D G3DSA:1.10.3900.10 12 173 7.9E-60 T 28-03-2018 AL549_RS18930 d4e705538048b1168d234ba6eff3ae7b 246 Gene3D G3DSA:2.60.440.10 174 245 1.0E-27 T 28-03-2018 IPR027462 Z ring-associated protein D, C-terminal domain AL549_RS18930 d4e705538048b1168d234ba6eff3ae7b 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 33.546 T 28-03-2018 IPR009777 Cell division protein ZapD AL549_RS18930 d4e705538048b1168d234ba6eff3ae7b 246 SUPERFAMILY SSF160950 1 245 8.24E-93 T 28-03-2018 IPR009777 Cell division protein ZapD AL549_RS06640 fe6ee8221434872fb1a12ede7a5f60e5 314 PIRSF PIRSF006230 2 280 3.0E-105 T 28-03-2018 IPR016478 GTPase, MTG1 AL549_RS06640 fe6ee8221434872fb1a12ede7a5f60e5 314 Pfam PF01926 50S ribosome-binding GTPase 120 186 1.1E-14 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AL549_RS06640 fe6ee8221434872fb1a12ede7a5f60e5 314 Gene3D G3DSA:1.20.120.430 13 178 9.4E-28 T 28-03-2018 AL549_RS06640 fe6ee8221434872fb1a12ede7a5f60e5 314 SUPERFAMILY SSF52540 12 186 9.14E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06640 fe6ee8221434872fb1a12ede7a5f60e5 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 275 3.7E-108 T 28-03-2018 IPR019991 GTP-binding protein, ribosome biogenesis AL549_RS06640 fe6ee8221434872fb1a12ede7a5f60e5 314 Gene3D G3DSA:1.10.1580.10 179 269 3.2E-24 T 28-03-2018 IPR023179 GTP-binding protein, orthogonal bundle domain AL549_RS09535 56afeb419e6b863b3052281a4ebdde09 758 SUPERFAMILY SSF52540 4 181 7.14E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS09535 56afeb419e6b863b3052281a4ebdde09 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 687 3.9E-178 T 28-03-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AL549_RS09535 56afeb419e6b863b3052281a4ebdde09 758 Pfam PF02421 Ferrous iron transport protein B 4 161 3.0E-58 T 28-03-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 AL549_RS09535 56afeb419e6b863b3052281a4ebdde09 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 9.5E-19 T 28-03-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 AL549_RS09535 56afeb419e6b863b3052281a4ebdde09 758 Gene3D G3DSA:3.40.50.300 2 288 2.0E-32 T 28-03-2018 AL549_RS09535 56afeb419e6b863b3052281a4ebdde09 758 Pfam PF07670 Nucleoside recognition 349 440 2.1E-13 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL549_RS09535 56afeb419e6b863b3052281a4ebdde09 758 Pfam PF07670 Nucleoside recognition 509 691 2.2E-36 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL549_RS06970 5c5ab9d103400e9e3518c415eedfffd7 282 Gene3D G3DSA:1.25.40.10 212 260 2.3E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS06970 5c5ab9d103400e9e3518c415eedfffd7 282 Gene3D G3DSA:1.25.40.10 105 211 6.1E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS06970 5c5ab9d103400e9e3518c415eedfffd7 282 SMART SM00028 220 253 0.0027 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS06970 5c5ab9d103400e9e3518c415eedfffd7 282 SMART SM00028 186 219 22.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS06970 5c5ab9d103400e9e3518c415eedfffd7 282 Pfam PF13181 Tetratricopeptide repeat 220 252 1.3E-5 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS06970 5c5ab9d103400e9e3518c415eedfffd7 282 SUPERFAMILY SSF48452 172 255 1.22E-16 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS20785 6b5eb49ef223c26e7da3ca64bf90f315 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 3.7E-35 T 28-03-2018 IPR019886 Sodium symporter small subunit, predicted AL549_RS20785 6b5eb49ef223c26e7da3ca64bf90f315 88 Pfam PF13937 Domain of unknown function (DUF4212) 9 85 1.4E-34 T 28-03-2018 IPR019886 Sodium symporter small subunit, predicted AL549_RS07640 9936ae6cf7f61652b2b3d3799dc0a8b7 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 48.192 T 28-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL549_RS07640 9936ae6cf7f61652b2b3d3799dc0a8b7 231 SUPERFAMILY SSF53167 1 230 4.32E-75 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL549_RS07640 9936ae6cf7f61652b2b3d3799dc0a8b7 231 Pfam PF01048 Phosphorylase superfamily 2 227 5.8E-50 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL549_RS07640 9936ae6cf7f61652b2b3d3799dc0a8b7 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 1.7E-101 T 28-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL549_RS07640 9936ae6cf7f61652b2b3d3799dc0a8b7 231 Gene3D G3DSA:3.40.50.1580 1 231 8.9E-57 T 28-03-2018 AL549_RS20675 1bcf40be8f9cb235170140badf70c64f 125 SUPERFAMILY SSF81343 7 125 1.44E-49 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS20675 1bcf40be8f9cb235170140badf70c64f 125 PIRSF PIRSF000179 6 125 8.1E-55 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AL549_RS20675 1bcf40be8f9cb235170140badf70c64f 125 Gene3D G3DSA:1.20.1300.10 6 125 7.9E-23 T 28-03-2018 AL549_RS20675 1bcf40be8f9cb235170140badf70c64f 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.318 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AL549_RS20675 1bcf40be8f9cb235170140badf70c64f 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 1.0E-60 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AL549_RS20675 1bcf40be8f9cb235170140badf70c64f 125 Pfam PF02313 Fumarate reductase subunit D 11 123 5.0E-43 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AL549_RS13680 333e050372bf9301f7cc1903a956ed63 122 Gene3D G3DSA:3.10.180.10 8 122 1.2E-13 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS13680 333e050372bf9301f7cc1903a956ed63 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 118 1.1E-5 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL549_RS13680 333e050372bf9301f7cc1903a956ed63 122 SUPERFAMILY SSF54593 3 121 5.64E-18 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS11525 af3897bb5d9dcc6482573ab0cabcee00 560 Pfam PF02080 TrkA-C domain 309 374 2.0E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS11525 af3897bb5d9dcc6482573ab0cabcee00 560 Pfam PF02080 TrkA-C domain 232 281 5.6E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS11525 af3897bb5d9dcc6482573ab0cabcee00 560 SUPERFAMILY SSF116726 294 377 2.35E-10 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS11525 af3897bb5d9dcc6482573ab0cabcee00 560 SUPERFAMILY SSF116726 230 285 5.75E-10 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS11525 af3897bb5d9dcc6482573ab0cabcee00 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 57.658 T 28-03-2018 IPR023017 Transport protein YbjL, putative AL549_RS11525 af3897bb5d9dcc6482573ab0cabcee00 560 Gene3D G3DSA:3.30.70.1450 220 294 5.6E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS11525 af3897bb5d9dcc6482573ab0cabcee00 560 Gene3D G3DSA:3.30.70.1450 299 378 1.8E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL549_RS11525 af3897bb5d9dcc6482573ab0cabcee00 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 544 7.0E-38 T 28-03-2018 IPR006512 YidE/YbjL duplication AL549_RS11525 af3897bb5d9dcc6482573ab0cabcee00 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 171 1.2E-27 T 28-03-2018 IPR006512 YidE/YbjL duplication AL549_RS11525 af3897bb5d9dcc6482573ab0cabcee00 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 1.6E-42 T 28-03-2018 IPR006512 YidE/YbjL duplication AL549_RS11525 af3897bb5d9dcc6482573ab0cabcee00 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 2.5E-35 T 28-03-2018 IPR006512 YidE/YbjL duplication AL549_RS18920 69ee6372d73b2eedf5b6437fc85ed1c1 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 2.3E-34 T 28-03-2018 IPR010627 Peptidase A24A, N-terminal AL549_RS18920 69ee6372d73b2eedf5b6437fc85ed1c1 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 7.1E-30 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL549_RS18920 69ee6372d73b2eedf5b6437fc85ed1c1 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 7.1E-30 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL549_RS18920 69ee6372d73b2eedf5b6437fc85ed1c1 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 7.1E-30 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL549_RS18920 69ee6372d73b2eedf5b6437fc85ed1c1 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 7.1E-30 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL549_RS18920 69ee6372d73b2eedf5b6437fc85ed1c1 289 Pfam PF01478 Type IV leader peptidase family 137 244 9.1E-27 T 28-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AL549_RS20910 3181b677d932acbd289a41469a3b4e63 308 Gene3D G3DSA:3.40.50.720 4 104 1.0E-11 T 28-03-2018 AL549_RS20910 3181b677d932acbd289a41469a3b4e63 308 SUPERFAMILY SSF51735 94 274 3.04E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS20910 3181b677d932acbd289a41469a3b4e63 308 SUPERFAMILY SSF52283 9 115 7.48E-7 T 28-03-2018 AL549_RS20910 3181b677d932acbd289a41469a3b4e63 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 100 273 4.6E-46 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL549_RS20910 3181b677d932acbd289a41469a3b4e63 308 Gene3D G3DSA:3.40.50.720 105 274 4.7E-44 T 28-03-2018 AL549_RS09800 179360abc9098c747ef502cc50807d66 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 278 2.3E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS09800 179360abc9098c747ef502cc50807d66 285 Gene3D G3DSA:1.10.3720.10 2 272 6.9E-40 T 28-03-2018 AL549_RS09800 179360abc9098c747ef502cc50807d66 285 SUPERFAMILY SSF161098 8 285 2.9E-65 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS05480 17772691993984d462d7a4af32778859 67 Pfam PF11661 Protein of unknown function (DUF2986) 1 42 3.9E-20 T 28-03-2018 IPR021677 Protein of unknown function DUF2986 AL549_RS03160 5aff4ac5dd387e1b28f545def443ec03 739 SUPERFAMILY SSF50969 107 449 2.28E-16 T 28-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AL549_RS03160 5aff4ac5dd387e1b28f545def443ec03 739 Pfam PF13449 Esterase-like activity of phytase 460 720 1.6E-46 T 28-03-2018 IPR027372 Phytase-like domain AL549_RS03160 5aff4ac5dd387e1b28f545def443ec03 739 Gene3D G3DSA:2.130.10.10 123 722 6.0E-15 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL549_RS03160 5aff4ac5dd387e1b28f545def443ec03 739 Gene3D G3DSA:2.120.10.30 34 122 0.078 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL549_RS12275 679fce6a91c7107e84eb8909ef72fa08 392 Pfam PF00534 Glycosyl transferases group 1 206 353 4.4E-19 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL549_RS12275 679fce6a91c7107e84eb8909ef72fa08 392 SUPERFAMILY SSF53756 4 369 4.92E-35 T 28-03-2018 AL549_RS12275 679fce6a91c7107e84eb8909ef72fa08 392 Gene3D G3DSA:3.40.50.2000 191 360 2.2E-23 T 28-03-2018 AL549_RS06665 436c1372d6379bf2793de3f34b571864 339 SUPERFAMILY SSF47413 1 61 8.59E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS06665 436c1372d6379bf2793de3f34b571864 339 Gene3D G3DSA:3.40.50.2300 56 176 5.7E-32 T 28-03-2018 AL549_RS06665 436c1372d6379bf2793de3f34b571864 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 45 4.1E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS06665 436c1372d6379bf2793de3f34b571864 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.7E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS06665 436c1372d6379bf2793de3f34b571864 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.7E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS06665 436c1372d6379bf2793de3f34b571864 339 Pfam PF13377 Periplasmic binding protein-like domain 171 331 8.1E-43 T 28-03-2018 AL549_RS06665 436c1372d6379bf2793de3f34b571864 339 Gene3D G3DSA:3.40.50.2300 177 308 8.8E-47 T 28-03-2018 AL549_RS06665 436c1372d6379bf2793de3f34b571864 339 SUPERFAMILY SSF53822 62 332 4.12E-95 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS06665 436c1372d6379bf2793de3f34b571864 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 AL549_RS06665 436c1372d6379bf2793de3f34b571864 339 SMART SM00354 1 72 3.2E-34 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL549_RS06665 436c1372d6379bf2793de3f34b571864 339 Gene3D G3DSA:1.10.260.40 2 55 1.5E-20 T 28-03-2018 AL549_RS18360 2b8c72b9d872412ef3661e0f5b11dc99 172 Pfam PF01478 Type IV leader peptidase family 7 111 2.9E-11 T 28-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AL549_RS05645 1fde539eb1ebd51c19f9e8e21b40f30a 331 Pfam PF11557 Solitary outer membrane autotransporter beta-barrel domain 1 330 1.0E-151 T 28-03-2018 IPR021621 Solitary outer membrane autotransporter beta-barrel domain AL549_RS03965 2e3deaf34a3facc0cc07e35c89383571 104 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 1.0E-45 T 28-03-2018 IPR007458 Protein of unknown function DUF496 AL549_RS03965 2e3deaf34a3facc0cc07e35c89383571 104 PIRSF PIRSF028773 1 104 6.3E-46 T 28-03-2018 IPR007458 Protein of unknown function DUF496 AL549_RS03965 2e3deaf34a3facc0cc07e35c89383571 104 Pfam PF04363 Protein of unknown function (DUF496) 1 92 3.5E-42 T 28-03-2018 IPR007458 Protein of unknown function DUF496 AL549_RS03965 2e3deaf34a3facc0cc07e35c89383571 104 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 24.397 T 28-03-2018 IPR007458 Protein of unknown function DUF496 AL549_RS16300 4a96f81cf6caa34154233908f98ce070 596 Pfam PF12793 Sugar transport-related sRNA regulator N-term 13 126 3.9E-33 T 28-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AL549_RS16300 4a96f81cf6caa34154233908f98ce070 596 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 170 332 4.8E-17 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL549_RS16300 4a96f81cf6caa34154233908f98ce070 596 Gene3D G3DSA:3.90.76.10 152 244 4.8E-18 T 28-03-2018 AL549_RS16300 4a96f81cf6caa34154233908f98ce070 596 SUPERFAMILY SSF53850 130 594 1.1E-59 T 28-03-2018 AL549_RS16300 4a96f81cf6caa34154233908f98ce070 596 Gene3D G3DSA:3.40.190.10 245 330 3.2E-4 T 28-03-2018 AL549_RS03460 e5bff49aacd4d059c8d56fcc11af7767 1245 Pfam PF12561 ToxR activated gene A lipoprotein 723 856 2.1E-62 T 28-03-2018 IPR022218 ToxR activated gene A lipoprotein AL549_RS03460 e5bff49aacd4d059c8d56fcc11af7767 1245 Gene3D G3DSA:2.60.40.10 152 252 4.0E-5 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS03460 e5bff49aacd4d059c8d56fcc11af7767 1245 Pfam PF10462 Peptidase M66 352 657 2.0E-95 T 28-03-2018 IPR019503 Peptidase M66 domain GO:0004222 AL549_RS21875 a082c5b13b8179227eacd60312f8b4d2 509 SUPERFAMILY SSF55021 332 418 5.8E-27 T 28-03-2018 AL549_RS21875 a082c5b13b8179227eacd60312f8b4d2 509 SUPERFAMILY SSF53686 10 360 3.67E-107 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL549_RS21875 a082c5b13b8179227eacd60312f8b4d2 509 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 10 508 3.5E-251 T 28-03-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL549_RS21875 a082c5b13b8179227eacd60312f8b4d2 509 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 48 61 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AL549_RS21875 a082c5b13b8179227eacd60312f8b4d2 509 Gene3D G3DSA:3.40.50.1100 144 324 1.9E-53 T 28-03-2018 AL549_RS21875 a082c5b13b8179227eacd60312f8b4d2 509 Gene3D G3DSA:3.40.50.1100 33 143 2.8E-32 T 28-03-2018 AL549_RS21875 a082c5b13b8179227eacd60312f8b4d2 509 SUPERFAMILY SSF55021 415 508 2.13E-26 T 28-03-2018 AL549_RS21875 a082c5b13b8179227eacd60312f8b4d2 509 Gene3D G3DSA:3.40.1020.10 333 509 1.2E-71 T 28-03-2018 AL549_RS21875 a082c5b13b8179227eacd60312f8b4d2 509 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 311 8.3E-84 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL549_RS21875 a082c5b13b8179227eacd60312f8b4d2 509 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 324 414 5.5E-26 T 28-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL549_RS21875 a082c5b13b8179227eacd60312f8b4d2 509 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 422 508 1.8E-26 T 28-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL549_RS12025 3e69538c03e395b7a934250e66183208 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 1.3E-85 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL549_RS12025 3e69538c03e395b7a934250e66183208 231 SUPERFAMILY SSF52402 1 211 2.14E-66 T 28-03-2018 AL549_RS12025 3e69538c03e395b7a934250e66183208 231 Gene3D G3DSA:3.40.50.620 1 230 1.6E-51 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS12025 3e69538c03e395b7a934250e66183208 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 50.196 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL549_RS12025 3e69538c03e395b7a934250e66183208 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 1.5E-82 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL549_RS12025 3e69538c03e395b7a934250e66183208 231 PIRSF PIRSF006293 1 223 1.0E-81 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL549_RS12055 e3b30519370ebf7ac2857efca1745f67 397 Gene3D G3DSA:2.30.130.10 3 69 5.0E-23 T 28-03-2018 IPR002478 PUA domain GO:0003723 AL549_RS12055 e3b30519370ebf7ac2857efca1745f67 397 SUPERFAMILY SSF88697 4 72 3.41E-17 T 28-03-2018 IPR015947 PUA-like domain AL549_RS12055 e3b30519370ebf7ac2857efca1745f67 397 SMART SM00359 3 87 7.0E-14 T 28-03-2018 IPR002478 PUA domain GO:0003723 AL549_RS12055 e3b30519370ebf7ac2857efca1745f67 397 Gene3D G3DSA:3.30.750.80 73 165 7.4E-35 T 28-03-2018 AL549_RS12055 e3b30519370ebf7ac2857efca1745f67 397 SUPERFAMILY SSF53335 78 393 7.88E-70 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS12055 e3b30519370ebf7ac2857efca1745f67 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.506 T 28-03-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL549_RS12055 e3b30519370ebf7ac2857efca1745f67 397 Gene3D G3DSA:3.40.50.150 166 393 1.5E-33 T 28-03-2018 AL549_RS12055 e3b30519370ebf7ac2857efca1745f67 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 168 376 9.4E-31 T 28-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AL549_RS08720 888f52ab1c5ddaed817e12b3b8125d6d 458 Gene3D G3DSA:3.30.1850.10 3 111 3.6E-52 T 28-03-2018 IPR027820 Domain of unknown function DUF4478 AL549_RS08720 888f52ab1c5ddaed817e12b3b8125d6d 458 Gene3D G3DSA:3.40.50.450 121 450 8.4E-100 T 28-03-2018 AL549_RS08720 888f52ab1c5ddaed817e12b3b8125d6d 458 Pfam PF03641 Possible lysine decarboxylase 187 325 3.5E-34 T 28-03-2018 IPR031100 LOG family AL549_RS08720 888f52ab1c5ddaed817e12b3b8125d6d 458 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 6.4E-51 T 28-03-2018 IPR027820 Domain of unknown function DUF4478 AL549_RS08720 888f52ab1c5ddaed817e12b3b8125d6d 458 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 3.2E-57 T 28-03-2018 IPR021826 Domain of unknown function DUF3412 AL549_RS08720 888f52ab1c5ddaed817e12b3b8125d6d 458 SUPERFAMILY SSF102405 119 327 7.48E-41 T 28-03-2018 AL549_RS13635 fc5d6f360156eae166c0c64d374a9067 73 Pfam PF09905 DNA-binding protein VF530 6 68 8.4E-35 T 28-03-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 AL549_RS13635 fc5d6f360156eae166c0c64d374a9067 73 Gene3D G3DSA:1.10.720.30 14 70 2.0E-31 T 28-03-2018 IPR003034 SAP domain AL549_RS01420 addbc8e25ae4494ff439fd1dab17092e 545 Gene3D G3DSA:3.40.190.10 155 287 1.3E-33 T 28-03-2018 AL549_RS01420 addbc8e25ae4494ff439fd1dab17092e 545 PIRSF PIRSF002741 3 525 4.7E-90 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL549_RS01420 addbc8e25ae4494ff439fd1dab17092e 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 447 3.2E-87 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL549_RS01420 addbc8e25ae4494ff439fd1dab17092e 545 Gene3D G3DSA:3.10.105.10 288 487 1.8E-46 T 28-03-2018 AL549_RS01420 addbc8e25ae4494ff439fd1dab17092e 545 Gene3D G3DSA:3.40.190.10 488 545 0.0038 T 28-03-2018 AL549_RS01420 addbc8e25ae4494ff439fd1dab17092e 545 Gene3D G3DSA:3.90.76.10 45 154 3.1E-24 T 28-03-2018 AL549_RS01420 addbc8e25ae4494ff439fd1dab17092e 545 SUPERFAMILY SSF53850 26 534 7.24E-117 T 28-03-2018 AL549_RS01420 addbc8e25ae4494ff439fd1dab17092e 545 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 77 99 - T 28-03-2018 IPR023765 Solute-binding protein family 5, conserved site AL549_RS12970 38fcf348dc0aab033e298ce9922d0274 76 Pfam PF09016 Pas factor saposin fold 1 76 5.5E-44 T 28-03-2018 IPR015106 Pas factor saposin domain AL549_RS10320 0d4fe8f4d3cda7c2703a0a08dd7b0387 296 Gene3D G3DSA:3.40.50.10680 86 295 3.2E-40 T 28-03-2018 AL549_RS10320 0d4fe8f4d3cda7c2703a0a08dd7b0387 296 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.879 T 28-03-2018 IPR010119 Gluconeogenesis factor AL549_RS10320 0d4fe8f4d3cda7c2703a0a08dd7b0387 296 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 283 1.3E-103 T 28-03-2018 IPR010119 Gluconeogenesis factor AL549_RS10320 0d4fe8f4d3cda7c2703a0a08dd7b0387 296 Pfam PF01933 Uncharacterised protein family UPF0052 9 283 2.6E-75 T 28-03-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 AL549_RS10320 0d4fe8f4d3cda7c2703a0a08dd7b0387 296 SUPERFAMILY SSF142338 7 290 7.06E-83 T 28-03-2018 AL549_RS20495 f0f4661fee8256388bbf2cd58172022a 86 SUPERFAMILY SSF50182 7 69 1.16E-24 T 28-03-2018 IPR010920 LSM domain AL549_RS20495 f0f4661fee8256388bbf2cd58172022a 86 Gene3D G3DSA:2.30.30.100 4 73 3.4E-34 T 28-03-2018 AL549_RS20495 f0f4661fee8256388bbf2cd58172022a 86 Pfam PF17209 Hfq protein 7 69 1.7E-31 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AL549_RS20495 f0f4661fee8256388bbf2cd58172022a 86 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.6E-30 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AL549_RS20495 f0f4661fee8256388bbf2cd58172022a 86 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AL549_RS20715 fa931f67090e622159bddf6151b8eaa3 448 Pfam PF01554 MatE 22 181 8.0E-27 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS20715 fa931f67090e622159bddf6151b8eaa3 448 Pfam PF01554 MatE 245 406 1.1E-23 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS20715 fa931f67090e622159bddf6151b8eaa3 448 PIRSF PIRSF006603 1 446 9.3E-132 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS20715 fa931f67090e622159bddf6151b8eaa3 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 412 8.0E-59 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS23370 c027255cd32bf4257e3e4c1778a8e1e5 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.518 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL549_RS23370 c027255cd32bf4257e3e4c1778a8e1e5 176 SUPERFAMILY SSF50324 3 174 1.96E-66 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL549_RS23370 c027255cd32bf4257e3e4c1778a8e1e5 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL549_RS23370 c027255cd32bf4257e3e4c1778a8e1e5 176 Gene3D G3DSA:3.90.80.10 2 176 8.1E-52 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL549_RS23370 c027255cd32bf4257e3e4c1778a8e1e5 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.5E-53 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL549_RS07005 e46618f61c6b559b0adf24b6f91b198d 456 Gene3D G3DSA:3.30.1330.90 10 156 1.8E-52 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AL549_RS07005 e46618f61c6b559b0adf24b6f91b198d 456 Pfam PF03315 Serine dehydratase beta chain 3 153 7.3E-55 T 28-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL549_RS07005 e46618f61c6b559b0adf24b6f91b198d 456 SUPERFAMILY SSF143548 16 155 2.56E-45 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AL549_RS07005 e46618f61c6b559b0adf24b6f91b198d 456 Pfam PF03313 Serine dehydratase alpha chain 183 447 2.5E-94 T 28-03-2018 IPR005130 Serine dehydratase-like, alpha subunit AL549_RS07005 e46618f61c6b559b0adf24b6f91b198d 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 4.5E-201 T 28-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL549_RS07005 e46618f61c6b559b0adf24b6f91b198d 456 Gene3D G3DSA:1.10.4100.10 266 431 5.7E-29 T 28-03-2018 AL549_RS07480 5bb5a87b71261f41fcd7008530b46831 196 SUPERFAMILY SSF53697 1 191 2.83E-56 T 28-03-2018 AL549_RS07480 5bb5a87b71261f41fcd7008530b46831 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.141 T 28-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AL549_RS07480 5bb5a87b71261f41fcd7008530b46831 196 Pfam PF13580 SIS domain 9 144 3.8E-35 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL549_RS07480 5bb5a87b71261f41fcd7008530b46831 196 Gene3D G3DSA:3.40.50.10490 1 194 1.1E-38 T 28-03-2018 AL549_RS09185 e11e198f641d12b5079b2175ce4db142 363 Pfam PF02119 Flagellar P-ring protein 22 362 1.1E-138 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL549_RS09185 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 6.9E-86 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL549_RS09185 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 6.9E-86 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL549_RS09185 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 6.9E-86 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL549_RS09185 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 6.9E-86 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL549_RS09185 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 6.9E-86 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL549_RS09185 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 6.9E-86 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL549_RS09185 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 6.9E-86 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL549_RS09185 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 6.9E-86 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL549_RS09185 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 6.9E-86 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL549_RS09185 e11e198f641d12b5079b2175ce4db142 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 39.93 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL549_RS15030 58e3292a3ecd107a1475799fd5a295f3 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.1E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS09925 59be4b2f5eec6bbf4dbe81288edbe0e8 497 Pfam PF00501 AMP-binding enzyme 37 400 1.4E-52 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL549_RS09925 59be4b2f5eec6bbf4dbe81288edbe0e8 497 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 56 488 1.1E-128 T 28-03-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 AL549_RS09925 59be4b2f5eec6bbf4dbe81288edbe0e8 497 Gene3D G3DSA:2.30.38.10 332 394 2.5E-4 T 28-03-2018 AL549_RS09925 59be4b2f5eec6bbf4dbe81288edbe0e8 497 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL549_RS09925 59be4b2f5eec6bbf4dbe81288edbe0e8 497 Gene3D G3DSA:3.30.300.30 395 497 1.5E-17 T 28-03-2018 AL549_RS09925 59be4b2f5eec6bbf4dbe81288edbe0e8 497 Gene3D G3DSA:3.40.50.980 29 188 2.3E-28 T 28-03-2018 AL549_RS09925 59be4b2f5eec6bbf4dbe81288edbe0e8 497 Gene3D G3DSA:3.40.50.980 189 331 1.6E-30 T 28-03-2018 AL549_RS09925 59be4b2f5eec6bbf4dbe81288edbe0e8 497 SUPERFAMILY SSF56801 33 492 1.31E-82 T 28-03-2018 AL549_RS16725 9a36e35624946a97f341125e596b6f80 929 SMART SM01276 475 799 1.4E-41 T 28-03-2018 IPR031161 Peptidase family M60 domain AL549_RS16725 9a36e35624946a97f341125e596b6f80 929 Pfam PF17291 N-terminal domain of M60-like peptidases 472 559 4.7E-6 T 28-03-2018 IPR035423 M60-like domain, N-terminal AL549_RS15850 2730a45e3e6d55c6443d0cd559d8d34b 581 Pfam PF00005 ABC transporter 353 500 6.3E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS15850 2730a45e3e6d55c6443d0cd559d8d34b 581 SUPERFAMILY SSF90123 7 325 2.35E-70 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS15850 2730a45e3e6d55c6443d0cd559d8d34b 581 Gene3D G3DSA:3.40.50.300 326 577 7.7E-59 T 28-03-2018 AL549_RS15850 2730a45e3e6d55c6443d0cd559d8d34b 581 SUPERFAMILY SSF52540 336 572 2.51E-76 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS15850 2730a45e3e6d55c6443d0cd559d8d34b 581 Pfam PF00664 ABC transporter transmembrane region 21 291 1.8E-45 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL549_RS15850 2730a45e3e6d55c6443d0cd559d8d34b 581 Gene3D G3DSA:1.20.1560.10 1 325 1.9E-60 T 28-03-2018 AL549_RS15850 2730a45e3e6d55c6443d0cd559d8d34b 581 SMART SM00382 361 547 9.3E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS15850 2730a45e3e6d55c6443d0cd559d8d34b 581 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS22790 bb048fe96bd731fa9c06ae7118b437b4 236 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 234 44.384 T 28-03-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 AL549_RS22790 bb048fe96bd731fa9c06ae7118b437b4 236 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 232 3.9E-79 T 28-03-2018 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 AL549_RS22790 bb048fe96bd731fa9c06ae7118b437b4 236 Gene3D G3DSA:1.10.510.10 124 236 7.4E-14 T 28-03-2018 AL549_RS22790 bb048fe96bd731fa9c06ae7118b437b4 236 Gene3D G3DSA:3.30.200.20 30 123 1.0E-7 T 28-03-2018 AL549_RS22790 bb048fe96bd731fa9c06ae7118b437b4 236 SUPERFAMILY SSF56112 44 192 1.62E-19 T 28-03-2018 IPR011009 Protein kinase-like domain AL549_RS00920 aa1463b6a1bf1b3ad399e9c221823bb7 615 Pfam PF01432 Peptidase family M3 284 549 3.3E-16 T 28-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AL549_RS00920 aa1463b6a1bf1b3ad399e9c221823bb7 615 SUPERFAMILY SSF55486 3 551 2.38E-73 T 28-03-2018 AL549_RS00920 aa1463b6a1bf1b3ad399e9c221823bb7 615 Gene3D G3DSA:1.10.1370.10 50 563 2.4E-43 T 28-03-2018 AL549_RS18870 9eb4305d4854e36bf2bc66b33d2d9c57 205 SUPERFAMILY SSF46689 8 83 8.98E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS18870 9eb4305d4854e36bf2bc66b33d2d9c57 205 SUPERFAMILY SSF48498 90 197 2.06E-10 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL549_RS18870 9eb4305d4854e36bf2bc66b33d2d9c57 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 8.1E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS18870 9eb4305d4854e36bf2bc66b33d2d9c57 205 Gene3D G3DSA:1.10.357.10 1 205 1.5E-31 T 28-03-2018 AL549_RS18870 9eb4305d4854e36bf2bc66b33d2d9c57 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.4E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS18870 9eb4305d4854e36bf2bc66b33d2d9c57 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.4E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS00265 324aa14247807d0cc9fb42795c1659f8 711 SUPERFAMILY SSF56935 22 711 1.26E-110 T 28-03-2018 AL549_RS00265 324aa14247807d0cc9fb42795c1659f8 711 Gene3D G3DSA:2.40.170.20 163 711 2.0E-66 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL549_RS00265 324aa14247807d0cc9fb42795c1659f8 711 Gene3D G3DSA:2.170.130.10 19 162 1.2E-30 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL549_RS00265 324aa14247807d0cc9fb42795c1659f8 711 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 694 711 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AL549_RS00265 324aa14247807d0cc9fb42795c1659f8 711 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 711 4.3E-127 T 28-03-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AL549_RS00265 324aa14247807d0cc9fb42795c1659f8 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 151 1.8E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL549_RS00265 324aa14247807d0cc9fb42795c1659f8 711 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 711 1.2E-128 T 28-03-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AL549_RS00265 324aa14247807d0cc9fb42795c1659f8 711 Pfam PF00593 TonB dependent receptor 233 710 6.5E-53 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL549_RS11875 63c7a33a16013ab4c4b7fdf918e03997 393 SUPERFAMILY SSF52540 22 262 2.79E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11875 63c7a33a16013ab4c4b7fdf918e03997 393 Gene3D G3DSA:2.40.50.100 259 312 1.9E-8 T 28-03-2018 AL549_RS11875 63c7a33a16013ab4c4b7fdf918e03997 393 SMART SM00382 48 231 8.0E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS11875 63c7a33a16013ab4c4b7fdf918e03997 393 SUPERFAMILY SSF50331 256 374 2.11E-20 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL549_RS11875 63c7a33a16013ab4c4b7fdf918e03997 393 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS11875 63c7a33a16013ab4c4b7fdf918e03997 393 Pfam PF00005 ABC transporter 40 181 1.9E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS11875 63c7a33a16013ab4c4b7fdf918e03997 393 Gene3D G3DSA:2.40.50.100 313 375 3.9E-7 T 28-03-2018 AL549_RS11875 63c7a33a16013ab4c4b7fdf918e03997 393 Gene3D G3DSA:3.40.50.300 18 258 1.7E-73 T 28-03-2018 AL549_RS17165 de5ed31118a8e794bdccf1da14832956 368 SMART SM00448 20 132 1.0E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS17165 de5ed31118a8e794bdccf1da14832956 368 SUPERFAMILY SSF52172 22 138 3.7E-33 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS17165 de5ed31118a8e794bdccf1da14832956 368 Pfam PF00072 Response regulator receiver domain 23 132 4.0E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS17165 de5ed31118a8e794bdccf1da14832956 368 Gene3D G3DSA:3.40.50.2300 15 337 1.5E-35 T 28-03-2018 AL549_RS01660 847525383d1e9719655a8cbf009c9061 169 Gene3D G3DSA:1.10.10.60 15 49 0.0012 T 28-03-2018 AL549_RS01660 847525383d1e9719655a8cbf009c9061 169 Gene3D G3DSA:1.10.260.40 50 129 3.2E-4 T 28-03-2018 AL549_RS17545 d9690103e013d76576729b65bd814a1e 158 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 1.3E-54 T 28-03-2018 IPR021318 Protein of unknown function DUF2919 AL549_RS02275 fd2becc74e05aac5b7a149d13f89ed85 648 Gene3D G3DSA:1.10.287.950 411 619 4.4E-39 T 28-03-2018 AL549_RS02275 fd2becc74e05aac5b7a149d13f89ed85 648 Gene3D G3DSA:1.10.287.950 316 410 0.23 T 28-03-2018 AL549_RS02275 fd2becc74e05aac5b7a149d13f89ed85 648 SMART SM00283 386 647 8.0E-32 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS02275 fd2becc74e05aac5b7a149d13f89ed85 648 SUPERFAMILY SSF58104 339 646 1.7E-54 T 28-03-2018 AL549_RS02275 fd2becc74e05aac5b7a149d13f89ed85 648 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 458 613 3.6E-34 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS02275 fd2becc74e05aac5b7a149d13f89ed85 648 SMART SM00304 319 371 2.2E-4 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS10450 c8be55b5c1eed7ac9113348044d6b7a1 206 Pfam PF01300 Telomere recombination 23 198 1.6E-45 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 AL549_RS10450 c8be55b5c1eed7ac9113348044d6b7a1 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 1.0E-70 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 AL549_RS10450 c8be55b5c1eed7ac9113348044d6b7a1 206 Gene3D G3DSA:3.90.870.10 1 205 6.1E-60 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL549_RS10450 c8be55b5c1eed7ac9113348044d6b7a1 206 SUPERFAMILY SSF55821 1 203 5.49E-64 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL549_RS03780 9e77c1837a13aed2773727d974bb20f3 946 SUPERFAMILY SSF46548 508 632 3.49E-23 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL549_RS03780 9e77c1837a13aed2773727d974bb20f3 946 Gene3D G3DSA:1.10.45.10 483 514 4.2E-14 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AL549_RS03780 9e77c1837a13aed2773727d974bb20f3 946 Pfam PF02913 FAD linked oxidases, C-terminal domain 275 521 2.4E-58 T 28-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AL549_RS03780 9e77c1837a13aed2773727d974bb20f3 946 Gene3D G3DSA:3.30.43.10 2 97 1.0E-12 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AL549_RS03780 9e77c1837a13aed2773727d974bb20f3 946 Gene3D G3DSA:1.10.1060.10 515 637 3.2E-19 T 28-03-2018 AL549_RS03780 9e77c1837a13aed2773727d974bb20f3 946 SUPERFAMILY SSF56176 13 269 3.07E-55 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL549_RS03780 9e77c1837a13aed2773727d974bb20f3 946 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 547 558 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL549_RS03780 9e77c1837a13aed2773727d974bb20f3 946 Pfam PF01565 FAD binding domain 48 184 5.3E-29 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL549_RS03780 9e77c1837a13aed2773727d974bb20f3 946 Pfam PF02754 Cysteine-rich domain 716 786 0.014 T 28-03-2018 IPR004017 Cysteine-rich domain AL549_RS03780 9e77c1837a13aed2773727d974bb20f3 946 SUPERFAMILY SSF55103 276 528 1.18E-55 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AL549_RS03780 9e77c1837a13aed2773727d974bb20f3 946 Pfam PF13183 4Fe-4S dicluster domain 545 617 5.9E-10 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS03780 9e77c1837a13aed2773727d974bb20f3 946 Gene3D G3DSA:3.30.465.10 100 295 1.2E-27 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL549_RS00435 cf2829834c395b3ea13b9ff1137b75ae 386 SMART SM00052 138 380 1.8E-69 T 28-03-2018 IPR001633 EAL domain AL549_RS00435 cf2829834c395b3ea13b9ff1137b75ae 386 Pfam PF00563 EAL domain 149 375 4.0E-64 T 28-03-2018 IPR001633 EAL domain AL549_RS00435 cf2829834c395b3ea13b9ff1137b75ae 386 Gene3D G3DSA:3.40.50.2300 1 127 9.5E-19 T 28-03-2018 AL549_RS00435 cf2829834c395b3ea13b9ff1137b75ae 386 SUPERFAMILY SSF141868 148 381 2.88E-73 T 28-03-2018 IPR001633 EAL domain AL549_RS00435 cf2829834c395b3ea13b9ff1137b75ae 386 SUPERFAMILY SSF52172 3 141 1.39E-18 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS00435 cf2829834c395b3ea13b9ff1137b75ae 386 Pfam PF00072 Response regulator receiver domain 7 120 2.7E-15 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS00435 cf2829834c395b3ea13b9ff1137b75ae 386 Gene3D G3DSA:3.20.20.450 128 384 8.0E-74 T 28-03-2018 IPR001633 EAL domain AL549_RS00435 cf2829834c395b3ea13b9ff1137b75ae 386 SMART SM00448 5 122 6.2E-4 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS18580 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 Gene3D G3DSA:3.30.300.70 1 80 7.0E-29 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AL549_RS18580 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 SUPERFAMILY SSF75420 2 83 4.71E-26 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AL549_RS18580 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 Pfam PF02576 RimP N-terminal domain 12 83 4.8E-29 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AL549_RS18580 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 SUPERFAMILY SSF74942 84 151 1.57E-17 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AL549_RS18580 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.907 T 28-03-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 AL549_RS18580 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 Gene3D G3DSA:2.30.30.180 88 148 2.6E-17 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AL549_RS18580 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 3.2E-21 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AL549_RS17650 63904c8cdc64ac5c56190d86da152a0e 208 Gene3D G3DSA:3.40.50.2020 1 206 1.5E-58 T 28-03-2018 AL549_RS17650 63904c8cdc64ac5c56190d86da152a0e 208 SUPERFAMILY SSF53271 3 206 2.49E-66 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AL549_RS17650 63904c8cdc64ac5c56190d86da152a0e 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 7.7E-92 T 28-03-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AL549_RS17650 63904c8cdc64ac5c56190d86da152a0e 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 3.1E-64 T 28-03-2018 AL549_RS17650 63904c8cdc64ac5c56190d86da152a0e 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.298 T 28-03-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AL549_RS12645 fc393701b0c5ad2fef36bc515c99aa2e 66 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 2 66 2.5E-28 T 28-03-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing AL549_RS12645 fc393701b0c5ad2fef36bc515c99aa2e 66 Gene3D G3DSA:1.20.5.510 6 36 8.6E-4 T 28-03-2018 AL549_RS12645 fc393701b0c5ad2fef36bc515c99aa2e 66 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 38 5.3E-5 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL549_RS12645 fc393701b0c5ad2fef36bc515c99aa2e 66 PIRSF PIRSF036704 1 66 4.9E-35 T 28-03-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing AL549_RS20860 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS20860 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.6E-44 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL549_RS20860 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL549_RS20860 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS20860 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS20860 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 1 98 1.1E-26 T 28-03-2018 AL549_RS20860 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL549_RS20860 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL549_RS20860 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL549_RS20860 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL549_RS20860 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL549_RS22975 deb233b7f6bd1d88b48a0a7ba799e040 727 SUPERFAMILY SSF52540 528 713 7.72E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS22975 deb233b7f6bd1d88b48a0a7ba799e040 727 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 514 717 3.8E-51 T 28-03-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AL549_RS22975 deb233b7f6bd1d88b48a0a7ba799e040 727 Pfam PF02706 Chain length determinant protein 19 112 7.6E-20 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AL549_RS22975 deb233b7f6bd1d88b48a0a7ba799e040 727 Pfam PF13807 G-rich domain on putative tyrosine kinase 375 455 1.2E-34 T 28-03-2018 IPR032807 Tyrosine kinase, G-rich domain AL549_RS22975 deb233b7f6bd1d88b48a0a7ba799e040 727 Gene3D G3DSA:3.30.1890.10 50 431 9.4E-73 T 28-03-2018 AL549_RS22975 deb233b7f6bd1d88b48a0a7ba799e040 727 Gene3D G3DSA:3.40.50.300 508 716 9.5E-32 T 28-03-2018 AL549_RS22975 deb233b7f6bd1d88b48a0a7ba799e040 727 Pfam PF13614 AAA domain 543 656 1.7E-11 T 28-03-2018 IPR025669 AAA domain AL549_RS01745 4cb050c5fa3ec8123c5eea6e700ebf5f 283 SUPERFAMILY SSF53474 34 268 9.47E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS01745 4cb050c5fa3ec8123c5eea6e700ebf5f 283 Pfam PF08386 TAP-like protein 212 270 1.4E-4 T 28-03-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal AL549_RS01745 4cb050c5fa3ec8123c5eea6e700ebf5f 283 Pfam PF12146 Serine aminopeptidase, S33 84 184 4.9E-10 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 AL549_RS01745 4cb050c5fa3ec8123c5eea6e700ebf5f 283 Gene3D G3DSA:3.40.50.1820 59 278 2.0E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS00050 a5595d1131da1bab00727fd04d3e6c9f 304 PIRSF PIRSF016660 1 302 8.0E-123 T 28-03-2018 IPR008526 Inner membrane protein YedI AL549_RS00050 a5595d1131da1bab00727fd04d3e6c9f 304 Pfam PF05661 Protein of unknown function (DUF808) 4 290 8.1E-117 T 28-03-2018 IPR008526 Inner membrane protein YedI AL549_RS06375 73945bf2bd45820db0a9e504132aca32 207 SUPERFAMILY SSF46626 122 206 6.73E-15 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS06375 73945bf2bd45820db0a9e504132aca32 207 Gene3D G3DSA:1.10.760.10 20 115 1.3E-11 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS06375 73945bf2bd45820db0a9e504132aca32 207 Gene3D G3DSA:1.10.760.10 116 206 5.6E-12 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS06375 73945bf2bd45820db0a9e504132aca32 207 PIRSF PIRSF000005 4 207 3.2E-33 T 28-03-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 AL549_RS06375 73945bf2bd45820db0a9e504132aca32 207 SUPERFAMILY SSF46626 24 114 4.8E-13 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS06375 73945bf2bd45820db0a9e504132aca32 207 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 128 202 9.1E-6 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS06375 73945bf2bd45820db0a9e504132aca32 207 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 30 111 1.4E-5 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS21635 cf1f9ce510d4125e650277372e9016bc 485 PIRSF PIRSF006247 1 485 1.7E-177 T 28-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AL549_RS21635 cf1f9ce510d4125e650277372e9016bc 485 Pfam PF02386 Cation transport protein 39 477 3.7E-91 T 28-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AL549_RS21635 cf1f9ce510d4125e650277372e9016bc 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 468 1.9E-116 T 28-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AL549_RS16295 328e194502ddf334fc60f7d047f0bf56 177 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 55 103 8.4E-14 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL549_RS16295 328e194502ddf334fc60f7d047f0bf56 177 Gene3D G3DSA:1.20.5.810 13 41 2.0E-11 T 28-03-2018 AL549_RS16295 328e194502ddf334fc60f7d047f0bf56 177 Pfam PF02627 Carboxymuconolactone decarboxylase family 39 119 5.3E-17 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL549_RS16295 328e194502ddf334fc60f7d047f0bf56 177 Gene3D G3DSA:1.20.1290.10 42 169 1.1E-26 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL549_RS16295 328e194502ddf334fc60f7d047f0bf56 177 SUPERFAMILY SSF69118 18 173 2.4E-39 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL549_RS12560 3cc7fd00c908a89f94480c9ff29e8672 262 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 120 256 2.9E-17 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AL549_RS12560 3cc7fd00c908a89f94480c9ff29e8672 262 Gene3D G3DSA:1.10.530.10 49 260 3.2E-24 T 28-03-2018 AL549_RS17485 14957a5da33ee8fbf1fcd77d4bfd4d61 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 16 102 2.7E-20 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL549_RS17485 14957a5da33ee8fbf1fcd77d4bfd4d61 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 3.9E-13 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL549_RS17485 14957a5da33ee8fbf1fcd77d4bfd4d61 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 3.9E-13 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL549_RS17485 14957a5da33ee8fbf1fcd77d4bfd4d61 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 3.9E-13 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL549_RS17485 14957a5da33ee8fbf1fcd77d4bfd4d61 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 17 103 3.8E-30 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL549_RS17485 14957a5da33ee8fbf1fcd77d4bfd4d61 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 103 16.986 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL549_RS14055 5cf7e4cc7f03272c3411f50e1542cef5 27 Pfam PF11665 Protein of unknown function (DUF3265) 9 27 4.2E-11 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS00460 97ec71ccdaa5e0bc2306a4e32275c4c6 508 Gene3D G3DSA:3.50.50.60 2 505 2.1E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS00460 97ec71ccdaa5e0bc2306a4e32275c4c6 508 PRINTS PR00419 Adrenodoxin reductase family signature 10 32 5.6E-6 T 28-03-2018 AL549_RS00460 97ec71ccdaa5e0bc2306a4e32275c4c6 508 PRINTS PR00419 Adrenodoxin reductase family signature 33 46 5.6E-6 T 28-03-2018 AL549_RS00460 97ec71ccdaa5e0bc2306a4e32275c4c6 508 SUPERFAMILY SSF51905 6 299 1.36E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS00460 97ec71ccdaa5e0bc2306a4e32275c4c6 508 SUPERFAMILY SSF51905 448 491 1.36E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS00460 97ec71ccdaa5e0bc2306a4e32275c4c6 508 Pfam PF13450 NAD(P)-binding Rossmann-like domain 13 77 5.4E-11 T 28-03-2018 AL549_RS18845 7cd08ccea99baef8a5a932b4eac4bb62 256 PIRSF PIRSF006648 7 253 2.7E-24 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL549_RS18845 7cd08ccea99baef8a5a932b4eac4bb62 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 9.4E-8 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL549_RS18845 7cd08ccea99baef8a5a932b4eac4bb62 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 9.4E-8 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL549_RS18845 7cd08ccea99baef8a5a932b4eac4bb62 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 9.4E-8 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL549_RS18845 7cd08ccea99baef8a5a932b4eac4bb62 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 9.4E-8 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL549_RS18845 7cd08ccea99baef8a5a932b4eac4bb62 256 Pfam PF01061 ABC-2 type transporter 8 218 6.4E-39 T 28-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AL549_RS10175 4cc1d49f96a28cb32a35dfd6d43b121e 444 Gene3D G3DSA:1.20.120.160 323 438 6.5E-15 T 28-03-2018 AL549_RS10175 4cc1d49f96a28cb32a35dfd6d43b121e 444 Pfam PF01627 Hpt domain 351 427 8.2E-12 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS10175 4cc1d49f96a28cb32a35dfd6d43b121e 444 SUPERFAMILY SSF47226 332 437 1.27E-17 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS06420 b1fb21410e45ab76485e37222ea713ed 690 Gene3D G3DSA:3.40.50.300 509 688 2.3E-26 T 28-03-2018 AL549_RS06420 b1fb21410e45ab76485e37222ea713ed 690 SUPERFAMILY SSF52540 390 681 1.59E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06420 b1fb21410e45ab76485e37222ea713ed 690 SUPERFAMILY SSF52540 198 321 1.59E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06420 b1fb21410e45ab76485e37222ea713ed 690 Pfam PF13361 UvrD-like helicase C-terminal domain 596 667 5.4E-16 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL549_RS06420 b1fb21410e45ab76485e37222ea713ed 690 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 7.9E-52 T 28-03-2018 IPR022161 DNA helicase IV, N-terminal domain AL549_RS06420 b1fb21410e45ab76485e37222ea713ed 690 Pfam PF00580 UvrD/REP helicase N-terminal domain 200 498 1.3E-37 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL549_RS06420 b1fb21410e45ab76485e37222ea713ed 690 Gene3D G3DSA:3.40.50.300 190 508 4.0E-43 T 28-03-2018 AL549_RS02195 39f7a128c12772044d66782bcf5fb40e 235 Gene3D G3DSA:3.40.605.10 26 232 8.6E-12 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL549_RS02195 39f7a128c12772044d66782bcf5fb40e 235 SUPERFAMILY SSF53720 10 182 3.14E-8 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL549_RS02200 a72139f93734fe4a96f74487d0cda6ec 497 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 489 2.7E-220 T 28-03-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 AL549_RS02200 a72139f93734fe4a96f74487d0cda6ec 497 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 437 1.7E-95 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL549_RS02200 a72139f93734fe4a96f74487d0cda6ec 497 Pfam PF00474 Sodium:solute symporter family 36 437 9.5E-107 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL549_RS17645 1a29c8c2996cbc45d37621cb2a3ecae4 417 Pfam PF00860 Permease family 3 371 4.1E-91 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL549_RS17645 1a29c8c2996cbc45d37621cb2a3ecae4 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 4 395 4.1E-111 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL549_RS17645 1a29c8c2996cbc45d37621cb2a3ecae4 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL549_RS17100 191bf719d63fbbe0d66a89c3c74db822 145 PIRSF PIRSF006173 1 144 5.5E-65 T 28-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 AL549_RS17100 191bf719d63fbbe0d66a89c3c74db822 145 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 40.704 T 28-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 AL549_RS17100 191bf719d63fbbe0d66a89c3c74db822 145 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 2.0E-7 T 28-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AL549_RS18210 9c8ec992ce36e29495ff844cf0edfeba 209 Pfam PF13505 Outer membrane protein beta-barrel domain 10 209 3.6E-15 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel AL549_RS18210 9c8ec992ce36e29495ff844cf0edfeba 209 Gene3D G3DSA:2.40.160.20 30 209 3.4E-15 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS18210 9c8ec992ce36e29495ff844cf0edfeba 209 SUPERFAMILY SSF56925 33 209 2.49E-14 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS00205 ca28bd5e5a6f7698b9f4d2143e0836fb 626 SUPERFAMILY SSF53300 92 273 8.9E-21 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS00205 ca28bd5e5a6f7698b9f4d2143e0836fb 626 SMART SM00028 403 436 1.4E-9 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS00205 ca28bd5e5a6f7698b9f4d2143e0836fb 626 Gene3D G3DSA:1.25.40.10 378 421 1.1E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS00205 ca28bd5e5a6f7698b9f4d2143e0836fb 626 Gene3D G3DSA:1.10.287.1110 422 443 7.6E-6 T 28-03-2018 AL549_RS00205 ca28bd5e5a6f7698b9f4d2143e0836fb 626 SMART SM00327 90 291 7.8E-7 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS00205 ca28bd5e5a6f7698b9f4d2143e0836fb 626 Gene3D G3DSA:1.20.960.10 337 376 0.14 T 28-03-2018 AL549_RS00205 ca28bd5e5a6f7698b9f4d2143e0836fb 626 SUPERFAMILY SSF48452 356 450 2.28E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS00205 ca28bd5e5a6f7698b9f4d2143e0836fb 626 Gene3D G3DSA:3.40.50.410 86 298 2.2E-24 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS00205 ca28bd5e5a6f7698b9f4d2143e0836fb 626 Pfam PF13519 von Willebrand factor type A domain 94 200 2.6E-16 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS00205 ca28bd5e5a6f7698b9f4d2143e0836fb 626 Pfam PF00515 Tetratricopeptide repeat 403 435 5.2E-11 T 28-03-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 AL549_RS10910 eb83ba7d3a123dbce4cc6cc6a6663e7e 343 Pfam PF09375 Imelysin 44 321 6.0E-46 T 28-03-2018 IPR018976 Peptidase M75, Imelysin AL549_RS03095 1bc6437569c152cd8024ff9e933b0c53 155 Gene3D G3DSA:1.10.1660.10 2 56 1.7E-20 T 28-03-2018 AL549_RS03095 1bc6437569c152cd8024ff9e933b0c53 155 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 3 142 8.7E-64 T 28-03-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AL549_RS03095 1bc6437569c152cd8024ff9e933b0c53 155 Pfam PF13411 MerR HTH family regulatory protein 4 69 1.2E-16 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS03095 1bc6437569c152cd8024ff9e933b0c53 155 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS03095 1bc6437569c152cd8024ff9e933b0c53 155 SMART SM00422 3 71 2.0E-25 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS03095 1bc6437569c152cd8024ff9e933b0c53 155 SUPERFAMILY SSF46955 4 125 2.53E-28 T 28-03-2018 IPR009061 Putative DNA-binding domain AL549_RS03095 1bc6437569c152cd8024ff9e933b0c53 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 6.4E-14 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS03095 1bc6437569c152cd8024ff9e933b0c53 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 6.4E-14 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS03095 1bc6437569c152cd8024ff9e933b0c53 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 6.4E-14 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS03095 1bc6437569c152cd8024ff9e933b0c53 155 Gene3D G3DSA:1.10.1660.10 57 141 1.2E-10 T 28-03-2018 AL549_RS07530 1c4a2cb50a3ef21756069db0ab3d9fd9 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL549_RS07530 1c4a2cb50a3ef21756069db0ab3d9fd9 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.357 T 28-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL549_RS07530 1c4a2cb50a3ef21756069db0ab3d9fd9 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 5.2E-6 T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL549_RS07530 1c4a2cb50a3ef21756069db0ab3d9fd9 360 Pfam PF00953 Glycosyl transferase family 4 99 283 2.5E-37 T 28-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 AL549_RS07530 1c4a2cb50a3ef21756069db0ab3d9fd9 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL549_RS07530 1c4a2cb50a3ef21756069db0ab3d9fd9 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 5.3E-157 T 28-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL549_RS08785 4530c97d350915a013bcdbde1886d6ea 199 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 2.9E-35 T 28-03-2018 IPR003740 Uncharacterised membrane protein YitT AL549_RS16210 5db4b1070ad87968a5eeaa12d7a81355 264 SUPERFAMILY SSF52540 2 230 6.31E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS16210 5db4b1070ad87968a5eeaa12d7a81355 264 Pfam PF00005 ABC transporter 22 177 4.2E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS16210 5db4b1070ad87968a5eeaa12d7a81355 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS16210 5db4b1070ad87968a5eeaa12d7a81355 264 Gene3D G3DSA:3.40.50.300 1 246 2.1E-48 T 28-03-2018 AL549_RS16210 5db4b1070ad87968a5eeaa12d7a81355 264 SMART SM00382 31 226 1.1E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS20420 32cd0255b7a898861bd1d39ec67b4495 1088 SUPERFAMILY SSF56219 550 940 9.36E-27 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS20420 32cd0255b7a898861bd1d39ec67b4495 1088 Gene3D G3DSA:2.60.40.1260 23 146 1.0E-4 T 28-03-2018 IPR001322 Lamin Tail Domain AL549_RS20420 32cd0255b7a898861bd1d39ec67b4495 1088 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 579 934 3.3E-6 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS20420 32cd0255b7a898861bd1d39ec67b4495 1088 Gene3D G3DSA:3.60.10.10 551 942 1.7E-25 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS08885 4e93fac7540d03090b0302fd77e5953e 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.2E-29 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AL549_RS08885 4e93fac7540d03090b0302fd77e5953e 474 SUPERFAMILY SSF102114 123 374 2.88E-62 T 28-03-2018 AL549_RS08885 4e93fac7540d03090b0302fd77e5953e 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 1.1E-152 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AL549_RS08885 4e93fac7540d03090b0302fd77e5953e 474 Pfam PF01938 TRAM domain 379 440 4.8E-18 T 28-03-2018 IPR002792 TRAM domain AL549_RS08885 4e93fac7540d03090b0302fd77e5953e 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.906 T 28-03-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AL549_RS08885 4e93fac7540d03090b0302fd77e5953e 474 SMART SM00729 147 367 4.6E-65 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL549_RS08885 4e93fac7540d03090b0302fd77e5953e 474 Gene3D G3DSA:3.80.30.20 144 381 3.7E-53 T 28-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe AL549_RS08885 4e93fac7540d03090b0302fd77e5953e 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AL549_RS08885 4e93fac7540d03090b0302fd77e5953e 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 2.9E-198 T 28-03-2018 AL549_RS08885 4e93fac7540d03090b0302fd77e5953e 474 Pfam PF04055 Radical SAM superfamily 151 325 3.9E-28 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS05890 bed2b0b74381eee5e58e396ce4a2db4f 298 SUPERFAMILY SSF103481 47 145 8.5E-17 T 28-03-2018 AL549_RS05890 bed2b0b74381eee5e58e396ce4a2db4f 298 Pfam PF00892 EamA-like transporter family 12 142 6.8E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS05890 bed2b0b74381eee5e58e396ce4a2db4f 298 Pfam PF00892 EamA-like transporter family 161 287 8.4E-11 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS05890 bed2b0b74381eee5e58e396ce4a2db4f 298 SUPERFAMILY SSF103481 194 291 5.36E-14 T 28-03-2018 AL549_RS00865 58449d72008d52be5cfffdc1fdf4e954 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 1.4E-34 T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL549_RS00865 58449d72008d52be5cfffdc1fdf4e954 118 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL549_RS00865 58449d72008d52be5cfffdc1fdf4e954 118 Gene3D G3DSA:1.10.3830.10 7 118 8.1E-40 T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL549_RS03980 f682992f974d3cc9e0d893a4ca29324f 98 SUPERFAMILY SSF82771 10 79 1.09E-11 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AL549_RS03980 f682992f974d3cc9e0d893a4ca29324f 98 Pfam PF01541 GIY-YIG catalytic domain 10 79 6.5E-13 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AL549_RS03980 f682992f974d3cc9e0d893a4ca29324f 98 Gene3D G3DSA:3.40.1440.10 6 87 2.6E-5 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AL549_RS01640 ac105e5ec7f50a07c8357a6c68eb5278 406 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 8.2E-13 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS01640 ac105e5ec7f50a07c8357a6c68eb5278 406 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 8.2E-13 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS01640 ac105e5ec7f50a07c8357a6c68eb5278 406 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 8.2E-13 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS01640 ac105e5ec7f50a07c8357a6c68eb5278 406 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 8.2E-13 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS01640 ac105e5ec7f50a07c8357a6c68eb5278 406 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 8.2E-13 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS01640 ac105e5ec7f50a07c8357a6c68eb5278 406 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 404 36.415 T 28-03-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 AL549_RS01640 ac105e5ec7f50a07c8357a6c68eb5278 406 Gene3D G3DSA:1.10.3860.10 4 406 3.0E-73 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS01640 ac105e5ec7f50a07c8357a6c68eb5278 406 Pfam PF00375 Sodium:dicarboxylate symporter family 15 397 9.3E-66 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS01640 ac105e5ec7f50a07c8357a6c68eb5278 406 SUPERFAMILY SSF118215 15 399 5.75E-97 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS23150 5273cc45afa3f4f8b8c3e126ef70d552 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.125 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23150 5273cc45afa3f4f8b8c3e126ef70d552 63 SUPERFAMILY SSF46561 1 61 2.62E-23 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23150 5273cc45afa3f4f8b8c3e126ef70d552 63 Gene3D G3DSA:1.10.287.310 1 63 1.1E-25 T 28-03-2018 AL549_RS23150 5273cc45afa3f4f8b8c3e126ef70d552 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 6.5E-24 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23150 5273cc45afa3f4f8b8c3e126ef70d552 63 Pfam PF00831 Ribosomal L29 protein 4 60 2.5E-25 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23150 5273cc45afa3f4f8b8c3e126ef70d552 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 28-03-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS07735 0b56ddb7ba6847f04e2a09e0aabd2e03 293 Hamap MF_00152 Probable endonuclease 4 [nfo]. 11 288 42.195 T 28-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AL549_RS07735 0b56ddb7ba6847f04e2a09e0aabd2e03 293 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 8.4E-40 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL549_RS07735 0b56ddb7ba6847f04e2a09e0aabd2e03 293 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 28-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AL549_RS07735 0b56ddb7ba6847f04e2a09e0aabd2e03 293 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 28-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AL549_RS07735 0b56ddb7ba6847f04e2a09e0aabd2e03 293 SUPERFAMILY SSF51658 12 287 2.88E-98 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL549_RS07735 0b56ddb7ba6847f04e2a09e0aabd2e03 293 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 78 86 - T 28-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AL549_RS07735 0b56ddb7ba6847f04e2a09e0aabd2e03 293 SMART SM00518 12 288 3.2E-121 T 28-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AL549_RS07735 0b56ddb7ba6847f04e2a09e0aabd2e03 293 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 12 285 5.7E-107 T 28-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AL549_RS07735 0b56ddb7ba6847f04e2a09e0aabd2e03 293 Gene3D G3DSA:3.20.20.150 10 293 3.8E-56 T 28-03-2018 AL549_RS19715 798c47fc07f4a0fd4262b1c9847b8336 320 Gene3D G3DSA:3.90.180.10 133 181 7.9E-5 T 28-03-2018 AL549_RS19715 798c47fc07f4a0fd4262b1c9847b8336 320 SUPERFAMILY SSF51735 103 290 5.5E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS19715 798c47fc07f4a0fd4262b1c9847b8336 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL549_RS19715 798c47fc07f4a0fd4262b1c9847b8336 320 Gene3D G3DSA:3.40.50.720 182 320 1.2E-38 T 28-03-2018 AL549_RS19715 798c47fc07f4a0fd4262b1c9847b8336 320 SUPERFAMILY SSF52283 4 139 3.02E-32 T 28-03-2018 AL549_RS19715 798c47fc07f4a0fd4262b1c9847b8336 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL549_RS19715 798c47fc07f4a0fd4262b1c9847b8336 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 32 320 1.2E-24 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AL549_RS19715 798c47fc07f4a0fd4262b1c9847b8336 320 Gene3D G3DSA:3.40.50.720 1 132 4.7E-35 T 28-03-2018 AL549_RS19715 798c47fc07f4a0fd4262b1c9847b8336 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 1.7E-56 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL549_RS10475 5be18ad5f38cde5637f2eb2f29c5b51c 255 SUPERFAMILY SSF81301 35 80 1.24E-7 T 28-03-2018 AL549_RS10475 5be18ad5f38cde5637f2eb2f29c5b51c 255 Gene3D G3DSA:3.30.460.10 6 135 4.2E-12 T 28-03-2018 AL549_RS10475 5be18ad5f38cde5637f2eb2f29c5b51c 255 Pfam PF01909 Nucleotidyltransferase domain 36 72 2.4E-5 T 28-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AL549_RS04075 d4ef41d48c11f2a51dafb8ef1314100d 378 PIRSF PIRSF038994 3 378 2.3E-93 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AL549_RS04075 d4ef41d48c11f2a51dafb8ef1314100d 378 Gene3D G3DSA:2.30.40.10 5 70 1.9E-5 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS04075 d4ef41d48c11f2a51dafb8ef1314100d 378 SUPERFAMILY SSF51338 4 55 5.44E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS04075 d4ef41d48c11f2a51dafb8ef1314100d 378 Pfam PF01979 Amidohydrolase family 52 374 8.2E-14 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL549_RS04075 d4ef41d48c11f2a51dafb8ef1314100d 378 Gene3D G3DSA:3.20.20.140 71 346 2.4E-82 T 28-03-2018 AL549_RS04075 d4ef41d48c11f2a51dafb8ef1314100d 378 SUPERFAMILY SSF51556 56 345 2.04E-85 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL549_RS04075 d4ef41d48c11f2a51dafb8ef1314100d 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 4 373 7.1E-88 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AL549_RS18330 c59d951ecbc430885bc7c7f7c9d0d61e 150 Pfam PF07811 TadE-like protein 17 59 5.6E-10 T 28-03-2018 IPR012495 TadE-like AL549_RS16910 1a348ffd993c6914be2047578ba318d5 663 Gene3D G3DSA:1.10.287.950 436 663 7.5E-51 T 28-03-2018 AL549_RS16910 1a348ffd993c6914be2047578ba318d5 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 629 5.9E-43 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS16910 1a348ffd993c6914be2047578ba318d5 663 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 158 2.3E-6 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL549_RS16910 1a348ffd993c6914be2047578ba318d5 663 Gene3D G3DSA:1.20.120.570 21 175 0.016 T 28-03-2018 AL549_RS16910 1a348ffd993c6914be2047578ba318d5 663 SUPERFAMILY SSF58104 354 663 7.72E-72 T 28-03-2018 AL549_RS16910 1a348ffd993c6914be2047578ba318d5 663 SMART SM00304 334 386 2.4E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS16910 1a348ffd993c6914be2047578ba318d5 663 SMART SM00283 401 662 3.0E-74 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS16910 1a348ffd993c6914be2047578ba318d5 663 Gene3D G3DSA:1.20.1480.30 332 435 0.0027 T 28-03-2018 AL549_RS11500 a872ed27de23aceeba01e5476220b9a4 374 Pfam PF17186 Lipocalin-like domain 252 374 5.1E-33 T 28-03-2018 AL549_RS11500 a872ed27de23aceeba01e5476220b9a4 374 SUPERFAMILY SSF159245 56 374 3.4E-94 T 28-03-2018 AL549_RS11500 a872ed27de23aceeba01e5476220b9a4 374 Gene3D G3DSA:2.40.370.10 252 374 3.4E-32 T 28-03-2018 IPR023374 AttH-like domain AL549_RS11500 a872ed27de23aceeba01e5476220b9a4 374 Pfam PF07143 CrtC N-terminal lipocalin domain 79 248 7.0E-45 T 28-03-2018 IPR010791 AttH domain AL549_RS11500 a872ed27de23aceeba01e5476220b9a4 374 Gene3D G3DSA:2.40.370.10 67 251 5.5E-49 T 28-03-2018 IPR023374 AttH-like domain AL549_RS00405 9c5391d3933dd50f4e7f6d291d258539 436 SUPERFAMILY SSF56954 4 419 1.44E-84 T 28-03-2018 AL549_RS00405 9c5391d3933dd50f4e7f6d291d258539 436 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 19 432 1.4E-91 T 28-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AL549_RS00405 9c5391d3933dd50f4e7f6d291d258539 436 Gene3D G3DSA:1.20.1600.10 14 427 9.2E-70 T 28-03-2018 AL549_RS00405 9c5391d3933dd50f4e7f6d291d258539 436 Pfam PF02321 Outer membrane efflux protein 22 213 1.1E-27 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL549_RS00405 9c5391d3933dd50f4e7f6d291d258539 436 Pfam PF02321 Outer membrane efflux protein 236 417 2.7E-34 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL549_RS01295 7771542680ceeafdb718fa0b2bf23393 440 SUPERFAMILY SSF111369 198 323 9.55E-9 T 28-03-2018 AL549_RS01295 7771542680ceeafdb718fa0b2bf23393 440 SUPERFAMILY SSF111369 60 115 9.55E-9 T 28-03-2018 AL549_RS01295 7771542680ceeafdb718fa0b2bf23393 440 SUPERFAMILY SSF111369 144 169 9.55E-9 T 28-03-2018 AL549_RS01295 7771542680ceeafdb718fa0b2bf23393 440 Gene3D G3DSA:1.20.1600.10 79 279 1.4E-17 T 28-03-2018 AL549_RS07770 df6cde5bc59f99473be30e9f0b0d12bb 253 SUPERFAMILY SSF53335 48 210 2.96E-33 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS07770 df6cde5bc59f99473be30e9f0b0d12bb 253 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 23 253 52.378 T 28-03-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 AL549_RS07770 df6cde5bc59f99473be30e9f0b0d12bb 253 Gene3D G3DSA:3.40.50.150 20 237 9.9E-36 T 28-03-2018 AL549_RS07770 df6cde5bc59f99473be30e9f0b0d12bb 253 Pfam PF05175 Methyltransferase small domain 56 149 7.7E-17 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AL549_RS07770 df6cde5bc59f99473be30e9f0b0d12bb 253 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 128 134 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL549_RS07770 df6cde5bc59f99473be30e9f0b0d12bb 253 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 155 179 5.6E-6 T 28-03-2018 AL549_RS07770 df6cde5bc59f99473be30e9f0b0d12bb 253 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 125 137 5.6E-6 T 28-03-2018 AL549_RS07770 df6cde5bc59f99473be30e9f0b0d12bb 253 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 60 74 5.6E-6 T 28-03-2018 AL549_RS12540 0b36a0fe56ccaa351a7d94627c31dd89 315 SUPERFAMILY SSF52402 4 158 4.19E-26 T 28-03-2018 AL549_RS12540 0b36a0fe56ccaa351a7d94627c31dd89 315 Gene3D G3DSA:3.40.50.620 159 304 3.6E-23 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS12540 0b36a0fe56ccaa351a7d94627c31dd89 315 Pfam PF00582 Universal stress protein family 4 148 6.0E-15 T 28-03-2018 IPR006016 UspA GO:0006950 AL549_RS12540 0b36a0fe56ccaa351a7d94627c31dd89 315 Pfam PF00582 Universal stress protein family 178 301 1.3E-15 T 28-03-2018 IPR006016 UspA GO:0006950 AL549_RS12540 0b36a0fe56ccaa351a7d94627c31dd89 315 Gene3D G3DSA:3.40.50.620 2 158 3.1E-18 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS12540 0b36a0fe56ccaa351a7d94627c31dd89 315 SUPERFAMILY SSF52402 158 309 2.26E-24 T 28-03-2018 AL549_RS22155 dc332184a692329916b1f0d248a1b17a 223 Pfam PF01810 LysE type translocator 16 212 3.6E-36 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL549_RS22155 dc332184a692329916b1f0d248a1b17a 223 PIRSF PIRSF006324 1 214 1.3E-49 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL549_RS00340 45a37ead63fa5f8dc4c4fe916d388201 574 SUPERFAMILY SSF52540 297 526 1.05E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS00340 45a37ead63fa5f8dc4c4fe916d388201 574 Pfam PF00005 ABC transporter 20 170 9.5E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS00340 45a37ead63fa5f8dc4c4fe916d388201 574 Pfam PF00005 ABC transporter 315 461 1.4E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS00340 45a37ead63fa5f8dc4c4fe916d388201 574 Gene3D G3DSA:3.40.50.300 1 241 1.4E-61 T 28-03-2018 AL549_RS00340 45a37ead63fa5f8dc4c4fe916d388201 574 Gene3D G3DSA:3.40.50.300 294 572 3.0E-61 T 28-03-2018 AL549_RS00340 45a37ead63fa5f8dc4c4fe916d388201 574 SMART SM00382 324 510 3.7E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS00340 45a37ead63fa5f8dc4c4fe916d388201 574 SMART SM00382 29 221 5.4E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS00340 45a37ead63fa5f8dc4c4fe916d388201 574 SUPERFAMILY SSF52540 2 235 1.86E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS00340 45a37ead63fa5f8dc4c4fe916d388201 574 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS00340 45a37ead63fa5f8dc4c4fe916d388201 574 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS00340 45a37ead63fa5f8dc4c4fe916d388201 574 Pfam PF12558 ATP-binding cassette cobalt transporter 235 306 1.3E-20 T 28-03-2018 IPR022216 ABC cobalt transporter GO:0016820 AL549_RS17935 008ece2645d5238365b8e2db5173828a 86 Pfam PF01197 Ribosomal protein L31 1 79 1.9E-27 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS17935 008ece2645d5238365b8e2db5173828a 86 PRINTS PR01249 Ribosomal protein L31 signature 60 78 5.6E-17 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS17935 008ece2645d5238365b8e2db5173828a 86 PRINTS PR01249 Ribosomal protein L31 signature 45 60 5.6E-17 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS17935 008ece2645d5238365b8e2db5173828a 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.6E-17 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS17935 008ece2645d5238365b8e2db5173828a 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS17935 008ece2645d5238365b8e2db5173828a 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 6.5E-19 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS17935 008ece2645d5238365b8e2db5173828a 86 SUPERFAMILY SSF143800 1 81 2.59E-23 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS17935 008ece2645d5238365b8e2db5173828a 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 29.093 T 28-03-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS03675 b96503d10bf28892434c5e6213a5c101 725 Gene3D G3DSA:3.20.20.450 460 724 6.2E-70 T 28-03-2018 IPR001633 EAL domain AL549_RS03675 b96503d10bf28892434c5e6213a5c101 725 SMART SM00052 466 714 3.5E-63 T 28-03-2018 IPR001633 EAL domain AL549_RS03675 b96503d10bf28892434c5e6213a5c101 725 Pfam PF00563 EAL domain 475 709 1.4E-57 T 28-03-2018 IPR001633 EAL domain AL549_RS03675 b96503d10bf28892434c5e6213a5c101 725 SUPERFAMILY SSF141868 474 717 1.96E-66 T 28-03-2018 IPR001633 EAL domain AL549_RS05905 ce913823cebf66db8250d870d88fdeda 611 Pfam PF02872 5'-nucleotidase, C-terminal domain 406 573 5.8E-23 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS05905 ce913823cebf66db8250d870d88fdeda 611 SUPERFAMILY SSF55816 404 601 6.02E-40 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS05905 ce913823cebf66db8250d870d88fdeda 611 Pfam PF00149 Calcineurin-like phosphoesterase 47 286 2.8E-8 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL549_RS05905 ce913823cebf66db8250d870d88fdeda 611 PRINTS PR01607 Apyrase family signature 548 567 5.1E-15 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS05905 ce913823cebf66db8250d870d88fdeda 611 PRINTS PR01607 Apyrase family signature 45 63 5.1E-15 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS05905 ce913823cebf66db8250d870d88fdeda 611 PRINTS PR01607 Apyrase family signature 269 292 5.1E-15 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS05905 ce913823cebf66db8250d870d88fdeda 611 PRINTS PR01607 Apyrase family signature 309 329 5.1E-15 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS05905 ce913823cebf66db8250d870d88fdeda 611 PRINTS PR01607 Apyrase family signature 250 267 5.1E-15 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS05905 ce913823cebf66db8250d870d88fdeda 611 Gene3D G3DSA:3.60.21.10 37 404 2.6E-75 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS05905 ce913823cebf66db8250d870d88fdeda 611 SUPERFAMILY SSF56300 42 354 4.01E-74 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS05905 ce913823cebf66db8250d870d88fdeda 611 Gene3D G3DSA:3.90.780.10 412 611 6.5E-33 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL549_RS05090 0767f643ab495be0e1c4cdacafb4eb24 497 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 493 2.1E-187 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL549_RS05090 0767f643ab495be0e1c4cdacafb4eb24 497 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 23 493 4.8E-204 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL549_RS11725 dc19445a1ce4f9d7ad5a61c98b8e2053 331 SUPERFAMILY SSF81345 7 326 9.94E-81 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL549_RS11725 dc19445a1ce4f9d7ad5a61c98b8e2053 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 30.12 T 28-03-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 AL549_RS11725 dc19445a1ce4f9d7ad5a61c98b8e2053 331 Pfam PF01032 FecCD transport family 20 326 3.3E-83 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL549_RS11725 dc19445a1ce4f9d7ad5a61c98b8e2053 331 Gene3D G3DSA:1.10.3470.10 9 331 2.5E-59 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL549_RS16740 bfd5084dc4b547844514224b1175d092 256 SMART SM00062 26 252 1.0E-69 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS16740 bfd5084dc4b547844514224b1175d092 256 Gene3D G3DSA:3.40.190.10 6 146 7.7E-37 T 28-03-2018 AL549_RS16740 bfd5084dc4b547844514224b1175d092 256 SMART SM00079 26 251 1.6E-4 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL549_RS16740 bfd5084dc4b547844514224b1175d092 256 Gene3D G3DSA:3.40.190.10 147 256 1.2E-18 T 28-03-2018 AL549_RS16740 bfd5084dc4b547844514224b1175d092 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 250 4.0E-61 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS16740 bfd5084dc4b547844514224b1175d092 256 SUPERFAMILY SSF53850 1 253 3.45E-71 T 28-03-2018 AL549_RS16740 bfd5084dc4b547844514224b1175d092 256 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 7 249 3.9E-82 T 28-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 AL549_RS16740 bfd5084dc4b547844514224b1175d092 256 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL549_RS22160 9b5efc3fbd472c765cba68feab8aec3c 268 Gene3D G3DSA:1.10.10.60 227 268 1.3E-12 T 28-03-2018 AL549_RS22160 9b5efc3fbd472c765cba68feab8aec3c 268 SUPERFAMILY SSF51215 27 143 1.31E-18 T 28-03-2018 AL549_RS22160 9b5efc3fbd472c765cba68feab8aec3c 268 Pfam PF12833 Helix-turn-helix domain 191 267 5.0E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS22160 9b5efc3fbd472c765cba68feab8aec3c 268 Gene3D G3DSA:1.10.10.60 168 226 1.4E-13 T 28-03-2018 AL549_RS22160 9b5efc3fbd472c765cba68feab8aec3c 268 SUPERFAMILY SSF46689 174 218 2.11E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS22160 9b5efc3fbd472c765cba68feab8aec3c 268 Pfam PF02311 AraC-like ligand binding domain 18 144 2.8E-19 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL549_RS22160 9b5efc3fbd472c765cba68feab8aec3c 268 SUPERFAMILY SSF46689 221 267 8.06E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS22160 9b5efc3fbd472c765cba68feab8aec3c 268 SMART SM00342 185 267 2.2E-28 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS22160 9b5efc3fbd472c765cba68feab8aec3c 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 4.6E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS22160 9b5efc3fbd472c765cba68feab8aec3c 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 4.6E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS22160 9b5efc3fbd472c765cba68feab8aec3c 268 Gene3D G3DSA:2.60.120.10 22 101 1.2E-4 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS01530 b07438668a53aba92845c8a39e732006 475 SUPERFAMILY SSF53720 4 474 6.54E-166 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL549_RS01530 b07438668a53aba92845c8a39e732006 475 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 24 469 1.3E-206 T 28-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 AL549_RS01530 b07438668a53aba92845c8a39e732006 475 Gene3D G3DSA:3.40.605.10 2 266 4.3E-99 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL549_RS01530 b07438668a53aba92845c8a39e732006 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL549_RS01530 b07438668a53aba92845c8a39e732006 475 Pfam PF00171 Aldehyde dehydrogenase family 17 470 4.4E-166 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL549_RS01530 b07438668a53aba92845c8a39e732006 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL549_RS01530 b07438668a53aba92845c8a39e732006 475 Gene3D G3DSA:3.40.309.10 267 457 2.6E-69 T 28-03-2018 AL549_RS03920 e5d726a8cacc63996f6a96e13a63c47b 157 Gene3D G3DSA:3.40.30.10 1 157 1.0E-28 T 28-03-2018 AL549_RS03920 e5d726a8cacc63996f6a96e13a63c47b 157 SUPERFAMILY SSF52833 1 156 1.89E-35 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS03920 e5d726a8cacc63996f6a96e13a63c47b 157 Pfam PF08534 Redoxin 4 154 4.9E-39 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL549_RS01290 40dd1dbcebd91a33fa37408e8b14a2d6 218 Gene3D G3DSA:1.10.10.60 4 60 1.2E-14 T 28-03-2018 AL549_RS01290 40dd1dbcebd91a33fa37408e8b14a2d6 218 Gene3D G3DSA:1.10.357.10 61 213 5.2E-23 T 28-03-2018 AL549_RS01290 40dd1dbcebd91a33fa37408e8b14a2d6 218 SUPERFAMILY SSF48498 91 207 6.04E-6 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL549_RS01290 40dd1dbcebd91a33fa37408e8b14a2d6 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 3.7E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS01290 40dd1dbcebd91a33fa37408e8b14a2d6 218 SUPERFAMILY SSF46689 7 85 7.7E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS19295 64988a8721523ba729331b955ac05639 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 4.4E-58 T 28-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL549_RS19295 64988a8721523ba729331b955ac05639 218 Gene3D G3DSA:3.40.50.1360 1 137 3.7E-41 T 28-03-2018 AL549_RS19295 64988a8721523ba729331b955ac05639 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 1.3E-68 T 28-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL549_RS19295 64988a8721523ba729331b955ac05639 218 Gene3D G3DSA:3.30.70.260 138 196 4.0E-23 T 28-03-2018 AL549_RS19295 64988a8721523ba729331b955ac05639 218 SUPERFAMILY SSF100950 1 146 1.49E-46 T 28-03-2018 AL549_RS19295 64988a8721523ba729331b955ac05639 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.919 T 28-03-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL549_RS19295 64988a8721523ba729331b955ac05639 218 SUPERFAMILY SSF75445 127 198 5.49E-24 T 28-03-2018 AL549_RS13515 29af6e24e54040abfd5bcf0329a6e578 45 Pfam PF11665 Protein of unknown function (DUF3265) 14 41 5.9E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS18895 07095a274149037b96cc768e6605b8d8 190 SMART SM00644 18 169 2.1E-58 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL549_RS18895 07095a274149037b96cc768e6605b8d8 190 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 27 169 9.5E-30 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL549_RS18895 07095a274149037b96cc768e6605b8d8 190 SUPERFAMILY SSF55846 5 181 1.31E-66 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL549_RS18895 07095a274149037b96cc768e6605b8d8 190 Gene3D G3DSA:3.40.80.10 3 189 8.5E-49 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL549_RS11080 21833bed7e16ded0bf5f62330d9342ca 205 Gene3D G3DSA:1.10.3890.10 4 203 1.1E-81 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 AL549_RS11080 21833bed7e16ded0bf5f62330d9342ca 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 9.3E-78 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 AL549_RS11080 21833bed7e16ded0bf5f62330d9342ca 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.984 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 AL549_RS11080 21833bed7e16ded0bf5f62330d9342ca 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 2.0E-107 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 AL549_RS11080 21833bed7e16ded0bf5f62330d9342ca 205 SUPERFAMILY SSF101322 2 204 1.2E-81 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 AL549_RS13295 d0222e8d5cecdf06880c45a5de6919ae 43 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 2.8E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS23445 480d699968dbb75a5e5732500c592b15 241 Pfam PF00005 ABC transporter 20 166 5.6E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS23445 480d699968dbb75a5e5732500c592b15 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 3.4E-126 T 28-03-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AL549_RS23445 480d699968dbb75a5e5732500c592b15 241 SMART SM00382 28 202 2.8E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS23445 480d699968dbb75a5e5732500c592b15 241 Gene3D G3DSA:3.40.50.300 1 238 3.5E-63 T 28-03-2018 AL549_RS23445 480d699968dbb75a5e5732500c592b15 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS23445 480d699968dbb75a5e5732500c592b15 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 1.4E-9 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL549_RS23445 480d699968dbb75a5e5732500c592b15 241 SUPERFAMILY SSF52540 3 237 2.43E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS03800 c59bb688411f76a04a799f139480be3e 564 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 552 3.6E-106 T 28-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AL549_RS03800 c59bb688411f76a04a799f139480be3e 564 Pfam PF02652 L-lactate permease 7 547 1.3E-108 T 28-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AL549_RS15685 0d56944c671936ca64ac16d7c70d3021 279 Gene3D G3DSA:3.90.1210.10 41 114 1.5E-8 T 28-03-2018 AL549_RS15685 0d56944c671936ca64ac16d7c70d3021 279 SMART SM00858 43 111 1.8E-4 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL549_RS15685 0d56944c671936ca64ac16d7c70d3021 279 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 11 277 1.8E-64 T 28-03-2018 IPR017592 Pilus assembly, Flp-type CpaB AL549_RS15685 0d56944c671936ca64ac16d7c70d3021 279 Pfam PF08666 SAF domain 44 110 1.3E-4 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL549_RS15685 0d56944c671936ca64ac16d7c70d3021 279 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 118 235 4.9E-28 T 28-03-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain AL549_RS11910 81e83e9bcd4929eb9ed6643a2abad893 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 208 2.3E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS11910 81e83e9bcd4929eb9ed6643a2abad893 211 SUPERFAMILY SSF46894 150 210 3.4E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS11910 81e83e9bcd4929eb9ed6643a2abad893 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS11910 81e83e9bcd4929eb9ed6643a2abad893 211 SMART SM00421 152 209 6.6E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS11910 81e83e9bcd4929eb9ed6643a2abad893 211 Gene3D G3DSA:1.10.10.10 110 211 2.7E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS11910 81e83e9bcd4929eb9ed6643a2abad893 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 3.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS11910 81e83e9bcd4929eb9ed6643a2abad893 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 3.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS11910 81e83e9bcd4929eb9ed6643a2abad893 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 3.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS21280 ca43f760a000c1f0e31406f1537b954a 276 ProSitePatterns PS01229 Hypothetical cof family signature 2. 223 245 - T 28-03-2018 AL549_RS21280 ca43f760a000c1f0e31406f1537b954a 276 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 271 4.1E-66 T 28-03-2018 IPR023214 HAD-like domain AL549_RS21280 ca43f760a000c1f0e31406f1537b954a 276 ProSitePatterns PS01228 Hypothetical cof family signature 1. 13 24 - T 28-03-2018 AL549_RS21280 ca43f760a000c1f0e31406f1537b954a 276 SUPERFAMILY SSF56784 12 275 5.33E-69 T 28-03-2018 IPR023214 HAD-like domain AL549_RS21280 ca43f760a000c1f0e31406f1537b954a 276 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 13 271 5.2E-60 T 28-03-2018 IPR000150 Cof family GO:0016787 AL549_RS21280 ca43f760a000c1f0e31406f1537b954a 276 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 242 4.7E-32 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AL549_RS21280 ca43f760a000c1f0e31406f1537b954a 276 Gene3D G3DSA:3.40.50.1000 3 276 1.1E-37 T 28-03-2018 IPR023214 HAD-like domain AL549_RS06880 58e31f2bcc5e4b6b4035f50bfce53cef 330 Gene3D G3DSA:3.50.30.60 165 330 2.1E-40 T 28-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain AL549_RS06880 58e31f2bcc5e4b6b4035f50bfce53cef 330 Gene3D G3DSA:3.40.50.10740 1 164 4.7E-52 T 28-03-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain AL549_RS06880 58e31f2bcc5e4b6b4035f50bfce53cef 330 SUPERFAMILY SSF141986 173 324 1.27E-38 T 28-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain AL549_RS06880 58e31f2bcc5e4b6b4035f50bfce53cef 330 PIRSF PIRSF028757 1 330 1.2E-86 T 28-03-2018 IPR003507 Peptidase family S66 AL549_RS06880 58e31f2bcc5e4b6b4035f50bfce53cef 330 Pfam PF02016 LD-carboxypeptidase 13 318 9.3E-72 T 28-03-2018 IPR003507 Peptidase family S66 AL549_RS06880 58e31f2bcc5e4b6b4035f50bfce53cef 330 SUPERFAMILY SSF52317 1 158 1.28E-45 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AL549_RS10390 dc0a4ef781951d5fa1376a33e7319248 132 Pfam PF03061 Thioesterase superfamily 26 98 2.7E-19 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL549_RS10390 dc0a4ef781951d5fa1376a33e7319248 132 SUPERFAMILY SSF54637 8 129 2.14E-38 T 28-03-2018 IPR029069 HotDog domain AL549_RS10390 dc0a4ef781951d5fa1376a33e7319248 132 Gene3D G3DSA:3.10.129.10 3 132 6.0E-35 T 28-03-2018 AL549_RS15555 50126dbcae1a780216e15558a97bba8d 387 SUPERFAMILY SSF56935 326 387 1.56E-27 T 28-03-2018 AL549_RS15555 50126dbcae1a780216e15558a97bba8d 387 SUPERFAMILY SSF56935 24 299 1.56E-27 T 28-03-2018 AL549_RS15555 50126dbcae1a780216e15558a97bba8d 387 Gene3D G3DSA:2.40.160.10 2 387 3.4E-31 T 28-03-2018 AL549_RS21295 9faa313a73986460a219f3d952eecf77 202 SMART SM01144 2 193 4.0E-54 T 28-03-2018 IPR005636 DTW AL549_RS21295 9faa313a73986460a219f3d952eecf77 202 Pfam PF03942 DTW domain 5 189 5.2E-42 T 28-03-2018 IPR005636 DTW AL549_RS04090 5b7f7961b5b9fbb8583d7f898073597f 321 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 29 284 5.0E-77 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL549_RS04090 5b7f7961b5b9fbb8583d7f898073597f 321 PIRSF PIRSF006470 1 321 2.8E-77 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL549_RS04090 5b7f7961b5b9fbb8583d7f898073597f 321 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 28 308 4.2E-93 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL549_RS10795 16ee0057af6f8a2764d582ffddfc4240 405 SUPERFAMILY SSF46785 10 76 3.45E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS10795 16ee0057af6f8a2764d582ffddfc4240 405 Gene3D G3DSA:1.10.10.10 10 81 4.5E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS10795 16ee0057af6f8a2764d582ffddfc4240 405 Gene3D G3DSA:3.30.420.40 225 375 5.1E-40 T 28-03-2018 AL549_RS10795 16ee0057af6f8a2764d582ffddfc4240 405 Pfam PF00480 ROK family 88 390 2.1E-70 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AL549_RS10795 16ee0057af6f8a2764d582ffddfc4240 405 SUPERFAMILY SSF53067 86 393 7.69E-55 T 28-03-2018 AL549_RS10795 16ee0057af6f8a2764d582ffddfc4240 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AL549_RS10795 16ee0057af6f8a2764d582ffddfc4240 405 Gene3D G3DSA:3.30.420.40 84 224 1.8E-31 T 28-03-2018 AL549_RS23705 69ca328941700b299e5049b298cbe748 650 SUPERFAMILY SSF52794 385 471 5.23E-25 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS23705 69ca328941700b299e5049b298cbe748 650 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 1.0E-167 T 28-03-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AL549_RS23705 69ca328941700b299e5049b298cbe748 650 SUPERFAMILY SSF55804 506 645 1.29E-39 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS23705 69ca328941700b299e5049b298cbe748 650 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 386 467 5.6E-12 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS23705 69ca328941700b299e5049b298cbe748 650 Gene3D G3DSA:3.40.930.10 506 648 4.1E-34 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS23705 69ca328941700b299e5049b298cbe748 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 507 644 3.1E-33 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AL549_RS23705 69ca328941700b299e5049b298cbe748 650 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 550 566 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain AL549_RS23705 69ca328941700b299e5049b298cbe748 650 Gene3D G3DSA:3.40.50.2300 371 476 5.7E-19 T 28-03-2018 AL549_RS23705 69ca328941700b299e5049b298cbe748 650 Pfam PF02378 Phosphotransferase system, EIIC 18 278 4.2E-19 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL549_RS19870 8a3ebef9b6656fef1124b5f9081a897d 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 7.0E-124 T 28-03-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 AL549_RS19870 8a3ebef9b6656fef1124b5f9081a897d 290 Pfam PF00483 Nucleotidyl transferase 9 265 3.2E-32 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL549_RS19870 8a3ebef9b6656fef1124b5f9081a897d 290 SUPERFAMILY SSF53448 2 271 1.38E-64 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS19870 8a3ebef9b6656fef1124b5f9081a897d 290 Gene3D G3DSA:3.90.550.10 3 272 8.1E-57 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS19235 cd0401abade11ec55bf87ec04594ce1d 535 SUPERFAMILY SSF51905 5 255 2.76E-77 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS19235 cd0401abade11ec55bf87ec04594ce1d 535 SUPERFAMILY SSF51905 356 447 2.76E-77 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS19235 cd0401abade11ec55bf87ec04594ce1d 535 PIRSF PIRSF000171 1 273 5.8E-26 T 28-03-2018 AL549_RS19235 cd0401abade11ec55bf87ec04594ce1d 535 PIRSF PIRSF000171 332 530 4.0E-14 T 28-03-2018 AL549_RS19235 cd0401abade11ec55bf87ec04594ce1d 535 Gene3D G3DSA:3.90.700.10 258 336 6.6E-35 T 28-03-2018 AL549_RS19235 cd0401abade11ec55bf87ec04594ce1d 535 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 2.9E-212 T 28-03-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL549_RS19235 cd0401abade11ec55bf87ec04594ce1d 535 SUPERFAMILY SSF56425 238 353 5.83E-42 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS19235 cd0401abade11ec55bf87ec04594ce1d 535 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 6.4E-15 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS19235 cd0401abade11ec55bf87ec04594ce1d 535 Pfam PF00890 FAD binding domain 10 392 1.6E-102 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS19235 cd0401abade11ec55bf87ec04594ce1d 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.0E-8 T 28-03-2018 AL549_RS19235 cd0401abade11ec55bf87ec04594ce1d 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.0E-8 T 28-03-2018 AL549_RS19235 cd0401abade11ec55bf87ec04594ce1d 535 Gene3D G3DSA:1.20.58.100 410 522 4.5E-28 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS19235 cd0401abade11ec55bf87ec04594ce1d 535 SUPERFAMILY SSF46977 426 525 3.4E-32 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS19235 cd0401abade11ec55bf87ec04594ce1d 535 Gene3D G3DSA:3.50.50.60 337 409 1.1E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS19235 cd0401abade11ec55bf87ec04594ce1d 535 Gene3D G3DSA:3.50.50.60 1 257 1.1E-37 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS04435 d20a765deecfd82ad667ce8fad6448b5 152 SUPERFAMILY SSF46785 16 151 1.71E-36 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS04435 d20a765deecfd82ad667ce8fad6448b5 152 SMART SM00347 39 137 3.6E-26 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS04435 d20a765deecfd82ad667ce8fad6448b5 152 Pfam PF01047 MarR family 46 102 5.5E-17 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS04435 d20a765deecfd82ad667ce8fad6448b5 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 8.5E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS04435 d20a765deecfd82ad667ce8fad6448b5 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 8.5E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS04435 d20a765deecfd82ad667ce8fad6448b5 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 8.5E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS04435 d20a765deecfd82ad667ce8fad6448b5 152 Gene3D G3DSA:1.10.10.10 2 152 1.9E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21485 8943f87e37cffbfd10a2c3840d151000 190 SUPERFAMILY SSF88659 123 189 4.86E-6 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS21485 8943f87e37cffbfd10a2c3840d151000 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 189 3.9E-21 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL549_RS21485 8943f87e37cffbfd10a2c3840d151000 190 Gene3D G3DSA:1.10.10.10 116 190 3.7E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21485 8943f87e37cffbfd10a2c3840d151000 190 Gene3D G3DSA:1.10.1740.10 2 115 2.3E-6 T 28-03-2018 AL549_RS21485 8943f87e37cffbfd10a2c3840d151000 190 Pfam PF07638 ECF sigma factor 6 189 8.1E-32 T 28-03-2018 IPR011517 RNA polymerase sigma-70 ECF-like AL549_RS21485 8943f87e37cffbfd10a2c3840d151000 190 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 5 189 9.6E-62 T 28-03-2018 IPR011517 RNA polymerase sigma-70 ECF-like AL549_RS17460 4fc41088834a753363657d90fa8c5533 143 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 3.6E-34 T 28-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AL549_RS17460 4fc41088834a753363657d90fa8c5533 143 Pfam PF02050 Flagellar FliJ protein 18 140 3.7E-30 T 28-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AL549_RS14235 b4a5af7a9b3a78c973645e60794e4e00 60 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 6.1E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS05820 d6ff02d15e5442eda615773a1351dbea 113 Gene3D G3DSA:3.30.70.120 1 108 2.7E-33 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL549_RS05820 d6ff02d15e5442eda615773a1351dbea 113 SUPERFAMILY SSF54913 5 107 1.96E-33 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL549_RS05820 d6ff02d15e5442eda615773a1351dbea 113 Pfam PF03091 CutA1 divalent ion tolerance protein 9 105 6.6E-32 T 28-03-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AL549_RS03615 08f50628019178cd88c6f813a322bd69 393 Gene3D G3DSA:3.60.120.10 4 386 4.2E-89 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AL549_RS03615 08f50628019178cd88c6f813a322bd69 393 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 105 382 7.1E-85 T 28-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AL549_RS03615 08f50628019178cd88c6f813a322bd69 393 SUPERFAMILY SSF56322 18 385 2.62E-86 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AL549_RS03615 08f50628019178cd88c6f813a322bd69 393 Pfam PF00425 chorismate binding enzyme 121 375 2.9E-71 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AL549_RS08000 3ed59c0ba6cb6cb0adb461c566a78bea 107 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 7.7E-31 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL549_RS08000 3ed59c0ba6cb6cb0adb461c566a78bea 107 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 2.7E-22 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL549_RS08000 3ed59c0ba6cb6cb0adb461c566a78bea 107 Gene3D G3DSA:3.30.160.100 1 100 6.2E-27 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL549_RS08000 3ed59c0ba6cb6cb0adb461c566a78bea 107 SUPERFAMILY SSF69754 1 102 1.09E-29 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL549_RS14885 4b5603f0bfb24fde1cb56d1b106b5f8e 109 Gene3D G3DSA:2.20.25.10 80 109 8.1E-4 T 28-03-2018 AL549_RS04060 b182fb7cff27e2d6cf289542f32aa5f3 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 9.0E-56 T 28-03-2018 IPR014176 Phasin, subfamily 3 AL549_RS04060 b182fb7cff27e2d6cf289542f32aa5f3 115 Pfam PF09361 Phasin protein 8 108 1.6E-20 T 28-03-2018 IPR018968 Phasin AL549_RS04060 b182fb7cff27e2d6cf289542f32aa5f3 115 PIRSF PIRSF028226 1 115 1.3E-57 T 28-03-2018 IPR014176 Phasin, subfamily 3 AL549_RS06390 73976b974b64d1baef1e134f89f23c64 365 Gene3D G3DSA:2.60.40.1120 206 365 2.3E-4 T 28-03-2018 AL549_RS06390 73976b974b64d1baef1e134f89f23c64 365 Gene3D G3DSA:1.20.5.170 99 205 0.25 T 28-03-2018 AL549_RS06390 73976b974b64d1baef1e134f89f23c64 365 Pfam PF08308 PEGA domain 296 360 9.4E-24 T 28-03-2018 IPR013229 PEGA AL549_RS06390 73976b974b64d1baef1e134f89f23c64 365 Gene3D G3DSA:1.20.5.730 27 98 4.4E-4 T 28-03-2018 AL549_RS23550 c5a516981688324e960ebf8e25793526 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.8E-39 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23550 c5a516981688324e960ebf8e25793526 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.8E-39 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23550 c5a516981688324e960ebf8e25793526 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.8E-39 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23550 c5a516981688324e960ebf8e25793526 85 SUPERFAMILY SSF110324 2 80 1.43E-34 T 28-03-2018 AL549_RS23550 c5a516981688324e960ebf8e25793526 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.447 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23550 c5a516981688324e960ebf8e25793526 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.1E-39 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23550 c5a516981688324e960ebf8e25793526 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 9.9E-44 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23550 c5a516981688324e960ebf8e25793526 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 28-03-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23550 c5a516981688324e960ebf8e25793526 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-18 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23550 c5a516981688324e960ebf8e25793526 85 Gene3D G3DSA:2.40.50.100 20 84 4.0E-31 T 28-03-2018 AL549_RS18555 a0606f8e5638701e386610cb7016c917 89 Gene3D G3DSA:1.10.287.10 2 89 1.3E-34 T 28-03-2018 AL549_RS18555 a0606f8e5638701e386610cb7016c917 89 Pfam PF00312 Ribosomal protein S15 8 88 4.0E-36 T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS18555 a0606f8e5638701e386610cb7016c917 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.574 T 28-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS18555 a0606f8e5638701e386610cb7016c917 89 SUPERFAMILY SSF47060 3 89 1.35E-34 T 28-03-2018 IPR009068 S15/NS1, RNA-binding AL549_RS18555 a0606f8e5638701e386610cb7016c917 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 2.7E-38 T 28-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS18555 a0606f8e5638701e386610cb7016c917 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 2.0E-30 T 28-03-2018 AL549_RS18555 a0606f8e5638701e386610cb7016c917 89 SMART SM01387 8 88 5.8E-52 T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS18555 a0606f8e5638701e386610cb7016c917 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS18640 9688b2fed8a64afe056ee19242f49016 476 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 48 439 3.0E-98 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL549_RS18640 9688b2fed8a64afe056ee19242f49016 476 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 36 451 3.7E-98 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL549_RS18640 9688b2fed8a64afe056ee19242f49016 476 SUPERFAMILY SSF56601 30 466 5.93E-84 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL549_RS18640 9688b2fed8a64afe056ee19242f49016 476 Gene3D G3DSA:3.40.710.10 28 471 1.4E-32 T 28-03-2018 AL549_RS18640 9688b2fed8a64afe056ee19242f49016 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 279 301 3.3E-26 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL549_RS18640 9688b2fed8a64afe056ee19242f49016 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 338 352 3.3E-26 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL549_RS18640 9688b2fed8a64afe056ee19242f49016 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 417 430 3.3E-26 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL549_RS18640 9688b2fed8a64afe056ee19242f49016 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 62 81 3.3E-26 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL549_RS18640 9688b2fed8a64afe056ee19242f49016 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 353 367 3.3E-26 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL549_RS08160 b0a5099348a8034d00601126d7ce0503 550 PIRSF PIRSF001363 17 550 1.0E-253 T 28-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL549_RS08160 b0a5099348a8034d00601126d7ce0503 550 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 40 549 8.0E-263 T 28-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL549_RS08160 b0a5099348a8034d00601126d7ce0503 550 Gene3D G3DSA:3.20.20.360 98 431 1.2E-108 T 28-03-2018 AL549_RS08160 b0a5099348a8034d00601126d7ce0503 550 Gene3D G3DSA:1.20.1220.12 432 549 1.9E-47 T 28-03-2018 AL549_RS08160 b0a5099348a8034d00601126d7ce0503 550 Pfam PF01274 Malate synthase 29 549 1.4E-201 T 28-03-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL549_RS08160 b0a5099348a8034d00601126d7ce0503 550 ProSitePatterns PS00510 Malate synthase signature. 283 298 - T 28-03-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL549_RS08160 b0a5099348a8034d00601126d7ce0503 550 SUPERFAMILY SSF51645 24 549 3.14E-188 T 28-03-2018 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL549_RS22510 4392e89e0b77e8b687e386ea9083cfa5 233 Gene3D G3DSA:3.10.610.10 47 158 9.6E-36 T 28-03-2018 AL549_RS22510 4392e89e0b77e8b687e386ea9083cfa5 233 Gene3D G3DSA:2.10.70.20 161 210 4.7E-15 T 28-03-2018 AL549_RS22510 4392e89e0b77e8b687e386ea9083cfa5 233 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS22510 4392e89e0b77e8b687e386ea9083cfa5 233 Pfam PF11612 Type II secretion system (T2SS), protein J 67 204 1.7E-39 T 28-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AL549_RS22510 4392e89e0b77e8b687e386ea9083cfa5 233 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 37 5.7E-10 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS22510 4392e89e0b77e8b687e386ea9083cfa5 233 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 37 3.0E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS22510 4392e89e0b77e8b687e386ea9083cfa5 233 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 15 206 3.3E-82 T 28-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AL549_RS22510 4392e89e0b77e8b687e386ea9083cfa5 233 SUPERFAMILY SSF54523 48 211 3.73E-56 T 28-03-2018 AL549_RS22855 d21b1b226aa1f93d73f0e35cd0d25664 397 SUPERFAMILY SSF53756 6 386 5.23E-45 T 28-03-2018 AL549_RS22855 d21b1b226aa1f93d73f0e35cd0d25664 397 Gene3D G3DSA:3.40.50.2000 198 372 5.9E-31 T 28-03-2018 AL549_RS22855 d21b1b226aa1f93d73f0e35cd0d25664 397 Pfam PF00534 Glycosyl transferases group 1 200 365 2.3E-28 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL549_RS06290 fa7081c1950133aa5d3772b888fe1644 521 Gene3D G3DSA:3.40.720.10 23 250 2.9E-53 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS06290 fa7081c1950133aa5d3772b888fe1644 521 Gene3D G3DSA:3.40.720.10 251 388 4.1E-32 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS06290 fa7081c1950133aa5d3772b888fe1644 521 Pfam PF00884 Sulfatase 27 353 7.9E-66 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL549_RS06290 fa7081c1950133aa5d3772b888fe1644 521 SUPERFAMILY SSF53649 23 470 6.54E-122 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS06290 fa7081c1950133aa5d3772b888fe1644 521 Gene3D G3DSA:3.30.1120.10 389 482 9.9E-11 T 28-03-2018 AL549_RS09025 5806ac9ad542f4227a79bb40219d4911 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.368 T 28-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL549_RS09025 5806ac9ad542f4227a79bb40219d4911 283 SUPERFAMILY SSF51569 2 279 3.85E-105 T 28-03-2018 AL549_RS09025 5806ac9ad542f4227a79bb40219d4911 283 Gene3D G3DSA:3.20.20.70 16 279 9.0E-69 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS09025 5806ac9ad542f4227a79bb40219d4911 283 Pfam PF00793 DAHP synthetase I family 10 275 9.0E-70 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL549_RS09025 5806ac9ad542f4227a79bb40219d4911 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 2.2E-116 T 28-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL549_RS07185 99017c8ff4b93a30824f64ef3b12671b 202 Pfam PF11140 Protein of unknown function (DUF2913) 13 192 1.3E-46 T 28-03-2018 IPR021316 Protein of unknown function DUF2913 AL549_RS02250 2e99678129ba5c9f97d6339e26b0dc70 639 Gene3D G3DSA:3.90.76.10 79 224 2.2E-29 T 28-03-2018 AL549_RS02250 2e99678129ba5c9f97d6339e26b0dc70 639 Gene3D G3DSA:3.10.105.10 364 600 2.3E-27 T 28-03-2018 AL549_RS02250 2e99678129ba5c9f97d6339e26b0dc70 639 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 102 534 3.0E-75 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL549_RS02250 2e99678129ba5c9f97d6339e26b0dc70 639 Gene3D G3DSA:3.40.190.10 250 363 3.6E-7 T 28-03-2018 AL549_RS02250 2e99678129ba5c9f97d6339e26b0dc70 639 SUPERFAMILY SSF53850 258 625 9.05E-78 T 28-03-2018 AL549_RS02250 2e99678129ba5c9f97d6339e26b0dc70 639 SUPERFAMILY SSF53850 83 219 9.05E-78 T 28-03-2018 AL549_RS16195 213520d6c02a15a916b3d9f6b4f5dc22 318 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.497 T 28-03-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 AL549_RS16195 213520d6c02a15a916b3d9f6b4f5dc22 318 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL549_RS16195 213520d6c02a15a916b3d9f6b4f5dc22 318 SUPERFAMILY SSF51395 1 312 1.12E-71 T 28-03-2018 AL549_RS16195 213520d6c02a15a916b3d9f6b4f5dc22 318 Pfam PF01207 Dihydrouridine synthase (Dus) 5 300 2.5E-76 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL549_RS16195 213520d6c02a15a916b3d9f6b4f5dc22 318 Gene3D G3DSA:3.20.20.70 1 242 1.9E-44 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS16195 213520d6c02a15a916b3d9f6b4f5dc22 318 PIRSF PIRSF006621 1 318 1.6E-75 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL549_RS22735 1daff0aa6e218ca32b230adda0467de2 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 28-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AL549_RS22735 1daff0aa6e218ca32b230adda0467de2 224 SUPERFAMILY SSF47781 17 91 2.71E-10 T 28-03-2018 IPR010994 RuvA domain 2-like AL549_RS22735 1daff0aa6e218ca32b230adda0467de2 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 2.0E-77 T 28-03-2018 IPR001405 RadC protein AL549_RS22735 1daff0aa6e218ca32b230adda0467de2 224 Pfam PF04002 RadC-like JAB domain 104 222 1.9E-45 T 28-03-2018 IPR025657 RadC-like JAB domain AL549_RS22735 1daff0aa6e218ca32b230adda0467de2 224 SUPERFAMILY SSF102712 130 192 5.89E-5 T 28-03-2018 AL549_RS22735 1daff0aa6e218ca32b230adda0467de2 224 Gene3D G3DSA:3.40.140.10 99 224 1.3E-48 T 28-03-2018 AL549_RS19805 a19e67979d1667eaf0057ffc88f058e5 192 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 3.8E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS19805 a19e67979d1667eaf0057ffc88f058e5 192 Gene3D G3DSA:3.30.700.10 8 192 3.1E-15 T 28-03-2018 AL549_RS19805 a19e67979d1667eaf0057ffc88f058e5 192 SUPERFAMILY SSF54523 8 104 1.65E-12 T 28-03-2018 AL549_RS19805 a19e67979d1667eaf0057ffc88f058e5 192 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 9.9E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS19445 299161419ea7dcafa0c3050a6f27149a 306 Gene3D G3DSA:3.40.710.10 1 306 1.3E-122 T 28-03-2018 AL549_RS19445 299161419ea7dcafa0c3050a6f27149a 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 1.8E-129 T 28-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AL549_RS19445 299161419ea7dcafa0c3050a6f27149a 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.389 T 28-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AL549_RS19445 299161419ea7dcafa0c3050a6f27149a 306 SUPERFAMILY SSF56601 3 306 7.92E-115 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL549_RS19445 299161419ea7dcafa0c3050a6f27149a 306 Pfam PF04960 Glutaminase 22 306 4.7E-112 T 28-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AL549_RS18755 2e9362a2dac63f1dd47c41a6746e9ab3 337 PIRSF PIRSF002825 1 337 1.2E-108 T 28-03-2018 IPR026045 Ferric binding protein AL549_RS18755 2e9362a2dac63f1dd47c41a6746e9ab3 337 Pfam PF13343 Bacterial extracellular solute-binding protein 72 295 3.9E-21 T 28-03-2018 AL549_RS18755 2e9362a2dac63f1dd47c41a6746e9ab3 337 Gene3D G3DSA:3.40.190.10 22 164 2.4E-21 T 28-03-2018 AL549_RS18755 2e9362a2dac63f1dd47c41a6746e9ab3 337 SUPERFAMILY SSF53850 24 332 9.51E-78 T 28-03-2018 AL549_RS18755 2e9362a2dac63f1dd47c41a6746e9ab3 337 Gene3D G3DSA:3.40.190.10 165 304 2.8E-21 T 28-03-2018 AL549_RS18785 9c82deffed1e4913cc53f15b9d8362b9 378 SUPERFAMILY SSF110738 1 375 1.44E-143 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AL549_RS18785 9c82deffed1e4913cc53f15b9d8362b9 378 Pfam PF02595 Glycerate kinase family 3 372 2.4E-149 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AL549_RS18785 9c82deffed1e4913cc53f15b9d8362b9 378 PIRSF PIRSF006078 1 377 1.3E-138 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AL549_RS18785 9c82deffed1e4913cc53f15b9d8362b9 378 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 373 2.1E-161 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AL549_RS18785 9c82deffed1e4913cc53f15b9d8362b9 378 Gene3D G3DSA:3.90.1510.10 42 276 9.7E-97 T 28-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 AL549_RS01235 09a67934b7d69518b0134e25b50902be 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.1E-11 T 28-03-2018 IPR000813 7Fe ferredoxin GO:0009055 AL549_RS01235 09a67934b7d69518b0134e25b50902be 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.1E-11 T 28-03-2018 IPR000813 7Fe ferredoxin GO:0009055 AL549_RS01235 09a67934b7d69518b0134e25b50902be 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.1E-11 T 28-03-2018 IPR000813 7Fe ferredoxin GO:0009055 AL549_RS01235 09a67934b7d69518b0134e25b50902be 107 Gene3D G3DSA:3.30.70.20 2 44 4.3E-13 T 28-03-2018 AL549_RS01235 09a67934b7d69518b0134e25b50902be 107 Pfam PF11953 Domain of unknown function (DUF3470) 68 107 1.0E-16 T 28-03-2018 IPR022569 Ferredoxin, C-terminal AL549_RS01235 09a67934b7d69518b0134e25b50902be 107 SUPERFAMILY SSF54862 3 96 7.38E-23 T 28-03-2018 AL549_RS01235 09a67934b7d69518b0134e25b50902be 107 Gene3D G3DSA:3.30.70.20 45 107 1.7E-10 T 28-03-2018 AL549_RS01235 09a67934b7d69518b0134e25b50902be 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 7.2E-7 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL549_RS19765 1d14f57a348d50bb2b62e434a0853612 296 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 274 4.7E-89 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AL549_RS19765 1d14f57a348d50bb2b62e434a0853612 296 Pfam PF04085 rod shape-determining protein MreC 123 269 1.2E-38 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AL549_RS19765 1d14f57a348d50bb2b62e434a0853612 296 PIRSF PIRSF038471 2 283 2.5E-80 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AL549_RS01645 a74a5453725f2437c811ec794e4036ca 290 SUPERFAMILY SSF53613 2 275 1.48E-69 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS01645 a74a5453725f2437c811ec794e4036ca 290 Pfam PF08543 Phosphomethylpyrimidine kinase 75 260 7.6E-21 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AL549_RS01645 a74a5453725f2437c811ec794e4036ca 290 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 284 53.181 T 28-03-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 AL549_RS01645 a74a5453725f2437c811ec794e4036ca 290 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 4.9E-104 T 28-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AL549_RS01645 a74a5453725f2437c811ec794e4036ca 290 Gene3D G3DSA:3.40.1190.20 1 284 2.3E-58 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS04285 0d819425512c426b90f1bf97392bb468 143 SUPERFAMILY SSF54593 6 131 2.2E-15 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS04285 0d819425512c426b90f1bf97392bb468 143 Gene3D G3DSA:3.10.180.10 5 139 2.1E-13 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS04285 0d819425512c426b90f1bf97392bb468 143 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 127 3.3E-4 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL549_RS03730 00dabc004148c2b654986295cb2e19a8 995 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 416 683 1.9E-13 T 28-03-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 AL549_RS03730 00dabc004148c2b654986295cb2e19a8 995 SUPERFAMILY SSF53649 589 689 1.99E-11 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS03730 00dabc004148c2b654986295cb2e19a8 995 SUPERFAMILY SSF53649 414 519 1.99E-11 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS03730 00dabc004148c2b654986295cb2e19a8 995 Gene3D G3DSA:3.40.720.10 343 974 4.1E-13 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS07395 2e19ce7a63d611cf906c3b7212352138 274 Pfam PF00149 Calcineurin-like phosphoesterase 15 206 3.7E-15 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL549_RS07395 2e19ce7a63d611cf906c3b7212352138 274 SUPERFAMILY SSF56300 14 272 2.63E-56 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS07395 2e19ce7a63d611cf906c3b7212352138 274 Gene3D G3DSA:3.60.21.10 1 270 1.8E-34 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS07395 2e19ce7a63d611cf906c3b7212352138 274 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 205 260 3.0E-27 T 28-03-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 AL549_RS07395 2e19ce7a63d611cf906c3b7212352138 274 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 14 260 42.713 T 28-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 AL549_RS16095 5ef3ce98b01ed06aded31d5a01cde490 509 Pfam PF01966 HD domain 319 453 2.6E-18 T 28-03-2018 IPR006674 HD domain AL549_RS16095 5ef3ce98b01ed06aded31d5a01cde490 509 SMART SM00471 313 463 1.5E-8 T 28-03-2018 IPR003607 HD/PDEase domain AL549_RS16095 5ef3ce98b01ed06aded31d5a01cde490 509 Gene3D G3DSA:1.10.3210.10 250 504 3.0E-47 T 28-03-2018 AL549_RS16095 5ef3ce98b01ed06aded31d5a01cde490 509 SUPERFAMILY SSF109604 293 491 8.17E-34 T 28-03-2018 AL549_RS01355 3fa2bd709bcbc982c6e7fe9e95f9f9d0 446 PIRSF PIRSF006603 2 446 9.0E-65 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS01355 3fa2bd709bcbc982c6e7fe9e95f9f9d0 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 417 9.1E-58 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS01355 3fa2bd709bcbc982c6e7fe9e95f9f9d0 446 Pfam PF01554 MatE 19 179 2.1E-25 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS01355 3fa2bd709bcbc982c6e7fe9e95f9f9d0 446 Pfam PF01554 MatE 247 404 1.2E-21 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS07795 7236624241cf0c80ca8f240fce509c75 579 Pfam PF01368 DHH family 71 204 2.1E-9 T 28-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL549_RS07795 7236624241cf0c80ca8f240fce509c75 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 21 575 2.6E-155 T 28-03-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AL549_RS07795 7236624241cf0c80ca8f240fce509c75 579 SUPERFAMILY SSF64182 45 462 2.88E-118 T 28-03-2018 AL549_RS07795 7236624241cf0c80ca8f240fce509c75 579 Pfam PF02272 DHHA1 domain 319 451 2.7E-26 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AL549_RS07795 7236624241cf0c80ca8f240fce509c75 579 Gene3D G3DSA:3.90.1640.10 49 242 1.4E-22 T 28-03-2018 AL549_RS06735 f5ad11d709469b9798e1adefa9a4a515 504 SUPERFAMILY SSF53720 21 463 6.41E-109 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL549_RS06735 f5ad11d709469b9798e1adefa9a4a515 504 PIRSF PIRSF036492 7 492 4.1E-163 T 28-03-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 AL549_RS06735 f5ad11d709469b9798e1adefa9a4a515 504 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 224 231 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL549_RS06735 f5ad11d709469b9798e1adefa9a4a515 504 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 252 263 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL549_RS06735 f5ad11d709469b9798e1adefa9a4a515 504 Gene3D G3DSA:3.40.309.10 240 434 1.1E-49 T 28-03-2018 AL549_RS06735 f5ad11d709469b9798e1adefa9a4a515 504 Gene3D G3DSA:3.40.605.10 9 239 3.2E-57 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL549_RS06735 f5ad11d709469b9798e1adefa9a4a515 504 Pfam PF00171 Aldehyde dehydrogenase family 22 448 6.6E-83 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL549_RS05985 f812bfd55d1c799e8a9c02c4c04a8983 161 PIRSF PIRSF003174 1 157 1.7E-48 T 28-03-2018 IPR010292 Uncharacterised protein family CreA AL549_RS05985 f812bfd55d1c799e8a9c02c4c04a8983 161 Pfam PF05981 CreA protein 24 146 4.8E-44 T 28-03-2018 IPR010292 Uncharacterised protein family CreA AL549_RS11100 eb8474f5d2e4551f07bd3f970c3d5ddf 135 SUPERFAMILY SSF81273 93 135 4.71E-12 T 28-03-2018 AL549_RS11100 eb8474f5d2e4551f07bd3f970c3d5ddf 135 SUPERFAMILY SSF81273 2 58 3.14E-16 T 28-03-2018 AL549_RS11100 eb8474f5d2e4551f07bd3f970c3d5ddf 135 Gene3D G3DSA:1.10.287.1050 1 57 4.2E-25 T 28-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 AL549_RS11100 eb8474f5d2e4551f07bd3f970c3d5ddf 135 PIRSF PIRSF002096 1 135 2.6E-54 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AL549_RS11100 eb8474f5d2e4551f07bd3f970c3d5ddf 135 Pfam PF00816 H-NS histone family 32 129 1.6E-19 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AL549_RS11100 eb8474f5d2e4551f07bd3f970c3d5ddf 135 Gene3D G3DSA:4.10.430.10 94 135 2.4E-19 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AL549_RS11100 eb8474f5d2e4551f07bd3f970c3d5ddf 135 SMART SM00528 88 135 2.9E-25 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AL549_RS14105 2570199024e10aa5bb3a58d8be87a8bb 46 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 5.3E-18 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS11700 13d36eb95ca4c4dd785559c62202fa90 255 Pfam PF02654 Cobalamin-5-phosphate synthase 14 247 5.4E-49 T 28-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL549_RS11700 13d36eb95ca4c4dd785559c62202fa90 255 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 255 45.675 T 28-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL549_RS07575 09ba3ff8ce5b8657171cc45b63515724 155 Pfam PF05258 Protein of unknown function (DUF721) 14 93 2.0E-10 T 28-03-2018 IPR007922 Protein of unknown function DUF721/UPF0232 AL549_RS11150 e7934b6fa876c66ca36bbb2d40d71f86 167 SUPERFAMILY SSF54427 28 128 3.94E-34 T 28-03-2018 IPR032710 NTF2-like domain AL549_RS11150 e7934b6fa876c66ca36bbb2d40d71f86 167 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 127 25.731 T 28-03-2018 IPR023006 Uncharacterised protein family UPF0225 AL549_RS11150 e7934b6fa876c66ca36bbb2d40d71f86 167 SUPERFAMILY SSF103642 147 167 3.6E-8 T 28-03-2018 AL549_RS11150 e7934b6fa876c66ca36bbb2d40d71f86 167 Pfam PF02810 SEC-C motif 150 167 4.9E-10 T 28-03-2018 IPR004027 SEC-C motif AL549_RS11150 e7934b6fa876c66ca36bbb2d40d71f86 167 Pfam PF02810 SEC-C motif 4 18 5.5E-6 T 28-03-2018 IPR004027 SEC-C motif AL549_RS11150 e7934b6fa876c66ca36bbb2d40d71f86 167 Gene3D G3DSA:3.10.450.50 3 130 6.3E-41 T 28-03-2018 AL549_RS20385 96844abbb627fcde05e024c8cf5ff061 289 SUPERFAMILY SSF52540 4 286 8.65E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20385 96844abbb627fcde05e024c8cf5ff061 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 8.1E-28 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AL549_RS20385 96844abbb627fcde05e024c8cf5ff061 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 8.1E-28 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AL549_RS20385 96844abbb627fcde05e024c8cf5ff061 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 8.1E-28 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AL549_RS20385 96844abbb627fcde05e024c8cf5ff061 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 8.1E-28 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AL549_RS20385 96844abbb627fcde05e024c8cf5ff061 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.0E-70 T 28-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 AL549_RS20385 96844abbb627fcde05e024c8cf5ff061 289 Gene3D G3DSA:3.40.50.300 1 289 1.3E-43 T 28-03-2018 AL549_RS14195 ac8009d4739b79888fd5f8d1b9177373 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.2E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS04315 d8ca926db1a700430c552e331e9d2c23 209 Gene3D G3DSA:1.10.10.60 6 70 1.7E-19 T 28-03-2018 AL549_RS04315 d8ca926db1a700430c552e331e9d2c23 209 Gene3D G3DSA:1.10.357.10 71 206 6.2E-12 T 28-03-2018 AL549_RS04315 d8ca926db1a700430c552e331e9d2c23 209 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL549_RS04315 d8ca926db1a700430c552e331e9d2c23 209 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 147 201 2.4E-13 T 28-03-2018 AL549_RS04315 d8ca926db1a700430c552e331e9d2c23 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 9.8E-15 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS04315 d8ca926db1a700430c552e331e9d2c23 209 SUPERFAMILY SSF46689 4 75 3.09E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS04315 d8ca926db1a700430c552e331e9d2c23 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.7E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS04315 d8ca926db1a700430c552e331e9d2c23 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.7E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS05340 b807b3c76f21ee804bb74e60bcee16d6 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 177 9.3E-42 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AL549_RS05340 b807b3c76f21ee804bb74e60bcee16d6 328 SUPERFAMILY SSF52540 4 171 3.81E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS05340 b807b3c76f21ee804bb74e60bcee16d6 328 SMART SM00833 241 324 0.0095 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL549_RS05340 b807b3c76f21ee804bb74e60bcee16d6 328 Gene3D G3DSA:3.40.50.300 2 200 6.2E-28 T 28-03-2018 AL549_RS02370 e1f01a2fdf68d1c1400abdda63322b1e 251 Gene3D G3DSA:3.40.50.1360 74 238 3.2E-27 T 28-03-2018 AL549_RS02370 e1f01a2fdf68d1c1400abdda63322b1e 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 2.1E-39 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AL549_RS02370 e1f01a2fdf68d1c1400abdda63322b1e 251 SMART SM01134 74 232 2.2E-42 T 28-03-2018 AL549_RS02370 e1f01a2fdf68d1c1400abdda63322b1e 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL549_RS02370 e1f01a2fdf68d1c1400abdda63322b1e 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 3.6E-16 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS02370 e1f01a2fdf68d1c1400abdda63322b1e 251 SMART SM00420 6 58 3.6E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS02370 e1f01a2fdf68d1c1400abdda63322b1e 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.7E-5 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS02370 e1f01a2fdf68d1c1400abdda63322b1e 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.7E-5 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL549_RS02370 e1f01a2fdf68d1c1400abdda63322b1e 251 SUPERFAMILY SSF46785 5 61 1.39E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02370 e1f01a2fdf68d1c1400abdda63322b1e 251 SUPERFAMILY SSF100950 75 234 1.67E-24 T 28-03-2018 AL549_RS02370 e1f01a2fdf68d1c1400abdda63322b1e 251 Gene3D G3DSA:1.10.10.10 1 63 1.5E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS07505 f1c8c2932e75d4e708d1a17ccbbd3a82 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 315 1.5E-119 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL549_RS07505 f1c8c2932e75d4e708d1a17ccbbd3a82 316 SUPERFAMILY SSF53335 7 113 2.12E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS07505 f1c8c2932e75d4e708d1a17ccbbd3a82 316 SUPERFAMILY SSF53335 217 316 2.12E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS07505 f1c8c2932e75d4e708d1a17ccbbd3a82 316 Gene3D G3DSA:1.10.150.170 112 219 3.0E-34 T 28-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL549_RS07505 f1c8c2932e75d4e708d1a17ccbbd3a82 316 Pfam PF01795 MraW methylase family 5 315 4.6E-111 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL549_RS07505 f1c8c2932e75d4e708d1a17ccbbd3a82 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 38.0 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL549_RS07505 f1c8c2932e75d4e708d1a17ccbbd3a82 316 SUPERFAMILY SSF81799 113 216 7.98E-31 T 28-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL549_RS07505 f1c8c2932e75d4e708d1a17ccbbd3a82 316 PIRSF PIRSF004486 1 316 4.1E-101 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL549_RS20350 e7521fbf38a14dbf2fdac87b469c8ef1 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 60 4.3E-32 T 28-03-2018 IPR012658 Conserved hypothetical protein CHP02443 AL549_RS20350 e7521fbf38a14dbf2fdac87b469c8ef1 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 53 6.0E-20 T 28-03-2018 IPR012658 Conserved hypothetical protein CHP02443 AL549_RS06865 9024eb5176152c1e580499769c240b72 382 Gene3D G3DSA:3.40.50.1970 8 181 1.3E-48 T 28-03-2018 AL549_RS06865 9024eb5176152c1e580499769c240b72 382 Gene3D G3DSA:1.20.1090.10 183 382 3.6E-72 T 28-03-2018 AL549_RS06865 9024eb5176152c1e580499769c240b72 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL549_RS06865 9024eb5176152c1e580499769c240b72 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL549_RS06865 9024eb5176152c1e580499769c240b72 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 374 1.2E-127 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL549_RS06865 9024eb5176152c1e580499769c240b72 382 SUPERFAMILY SSF56796 5 381 4.32E-137 T 28-03-2018 AL549_RS15450 865e9819fcc2a4d125661095828c5df7 95 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.6E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS15450 865e9819fcc2a4d125661095828c5df7 95 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.6E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS15450 865e9819fcc2a4d125661095828c5df7 95 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.6E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS15450 865e9819fcc2a4d125661095828c5df7 95 Gene3D G3DSA:4.10.520.10 1 95 8.7E-34 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL549_RS15450 865e9819fcc2a4d125661095828c5df7 95 SMART SM00411 3 92 2.7E-40 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS15450 865e9819fcc2a4d125661095828c5df7 95 SUPERFAMILY SSF47729 3 93 3.53E-32 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL549_RS15450 865e9819fcc2a4d125661095828c5df7 95 Pfam PF00216 Bacterial DNA-binding protein 3 91 9.0E-32 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL549_RS15450 865e9819fcc2a4d125661095828c5df7 95 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AL549_RS15450 865e9819fcc2a4d125661095828c5df7 95 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 93 1.1E-50 T 28-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AL549_RS15450 865e9819fcc2a4d125661095828c5df7 95 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 95 29.664 T 28-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AL549_RS21515 74a8506ebc253285dde7beaba080bcdd 325 Gene3D G3DSA:1.10.3720.10 3 308 1.4E-37 T 28-03-2018 AL549_RS21515 74a8506ebc253285dde7beaba080bcdd 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 3.0E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS21515 74a8506ebc253285dde7beaba080bcdd 325 SUPERFAMILY SSF161098 89 302 2.35E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS13690 cdf4bc06543ccf00a6058b193177f810 296 Gene3D G3DSA:3.40.1800.10 201 290 7.6E-7 T 28-03-2018 AL549_RS13690 cdf4bc06543ccf00a6058b193177f810 296 Pfam PF01844 HNH endonuclease 222 277 6.1E-5 T 28-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AL549_RS05655 5d6bdc131a40f357c46b9c26a14aec2c 124 Pfam PF10719 Late competence development protein ComFB 8 85 3.1E-13 T 28-03-2018 IPR019657 Late competence development protein ComFB AL549_RS10145 f38a735fc7f784c34d806d31afa550c3 456 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 43 428 4.6E-125 T 28-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AL549_RS10145 f38a735fc7f784c34d806d31afa550c3 456 Pfam PF02386 Cation transport protein 50 438 5.5E-56 T 28-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AL549_RS18010 922d5beb07596442bbece8fb3c1a53cd 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.873 T 28-03-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AL549_RS18010 922d5beb07596442bbece8fb3c1a53cd 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 2.0E-107 T 28-03-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AL549_RS18010 922d5beb07596442bbece8fb3c1a53cd 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 2.3E-59 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AL549_RS18010 922d5beb07596442bbece8fb3c1a53cd 198 PIRSF PIRSF006102 1 198 1.2E-65 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AL549_RS21350 97123248dd31542b35f7877e443aeb6c 243 Gene3D G3DSA:3.40.50.10090 1 116 1.3E-18 T 28-03-2018 AL549_RS21350 97123248dd31542b35f7877e443aeb6c 243 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 228 6.1E-36 T 28-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL549_RS21350 97123248dd31542b35f7877e443aeb6c 243 SUPERFAMILY SSF69618 1 241 1.57E-55 T 28-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL549_RS21350 97123248dd31542b35f7877e443aeb6c 243 Gene3D G3DSA:3.40.50.10090 117 242 9.5E-21 T 28-03-2018 AL549_RS03680 f4440fbfbb8c87a8d2a0ba90e9d6d858 1205 Gene3D G3DSA:2.40.50.70 139 177 0.0017 T 28-03-2018 AL549_RS03680 f4440fbfbb8c87a8d2a0ba90e9d6d858 1205 Gene3D G3DSA:2.40.50.70 332 375 5.0E-10 T 28-03-2018 AL549_RS03680 f4440fbfbb8c87a8d2a0ba90e9d6d858 1205 Pfam PF14600 Cellulose-binding domain 454 507 5.5E-14 T 28-03-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AL549_RS03680 f4440fbfbb8c87a8d2a0ba90e9d6d858 1205 SMART SM00495 462 503 1.2E-4 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS03680 f4440fbfbb8c87a8d2a0ba90e9d6d858 1205 Gene3D G3DSA:2.60.40.1080 178 241 0.002 T 28-03-2018 AL549_RS03680 f4440fbfbb8c87a8d2a0ba90e9d6d858 1205 Gene3D G3DSA:2.60.40.10 248 331 0.16 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS03680 f4440fbfbb8c87a8d2a0ba90e9d6d858 1205 Gene3D G3DSA:1.10.530.10 821 1205 2.0E-65 T 28-03-2018 AL549_RS03680 f4440fbfbb8c87a8d2a0ba90e9d6d858 1205 Gene3D G3DSA:2.60.40.10 376 443 1.9E-7 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS03680 f4440fbfbb8c87a8d2a0ba90e9d6d858 1205 Gene3D G3DSA:2.10.10.20 445 507 1.6E-8 T 28-03-2018 AL549_RS03680 f4440fbfbb8c87a8d2a0ba90e9d6d858 1205 SUPERFAMILY SSF51055 457 507 4.51E-13 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL549_RS12770 41b4a1c915f4611ccbbeaba8ced4e508 345 Gene3D G3DSA:3.40.1550.10 159 345 9.7E-23 T 28-03-2018 IPR028976 CheC-like domain AL549_RS12770 41b4a1c915f4611ccbbeaba8ced4e508 345 SUPERFAMILY SSF52172 23 136 2.85E-28 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS12770 41b4a1c915f4611ccbbeaba8ced4e508 345 SUPERFAMILY SSF103039 164 343 6.93E-29 T 28-03-2018 IPR028976 CheC-like domain AL549_RS12770 41b4a1c915f4611ccbbeaba8ced4e508 345 Gene3D G3DSA:3.40.50.2300 11 145 2.4E-28 T 28-03-2018 AL549_RS12770 41b4a1c915f4611ccbbeaba8ced4e508 345 SMART SM00448 25 137 2.2E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS12770 41b4a1c915f4611ccbbeaba8ced4e508 345 Pfam PF00072 Response regulator receiver domain 27 133 6.4E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS19580 87f9b2cc81ffac57399b7ea1ee12bdee 418 Gene3D G3DSA:1.10.3210.10 134 334 1.9E-32 T 28-03-2018 AL549_RS19580 87f9b2cc81ffac57399b7ea1ee12bdee 418 SMART SM00471 165 301 1.9E-7 T 28-03-2018 IPR003607 HD/PDEase domain AL549_RS19580 87f9b2cc81ffac57399b7ea1ee12bdee 418 SUPERFAMILY SSF109604 160 331 2.47E-26 T 28-03-2018 AL549_RS19580 87f9b2cc81ffac57399b7ea1ee12bdee 418 TIGRFAM TIGR00277 HDIG: HDIG domain 167 260 2.6E-7 T 28-03-2018 IPR006675 HDIG domain AL549_RS19580 87f9b2cc81ffac57399b7ea1ee12bdee 418 Pfam PF01966 HD domain 171 291 2.7E-15 T 28-03-2018 IPR006674 HD domain AL549_RS19580 87f9b2cc81ffac57399b7ea1ee12bdee 418 Pfam PF11871 Domain of unknown function (DUF3391) 4 138 5.5E-30 T 28-03-2018 IPR021812 Protein of unknown function DUF3391 AL549_RS00580 08c27ac4d7837cb169d36b8c28230dc7 127 SUPERFAMILY SSF54593 1 126 3.85E-30 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS00580 08c27ac4d7837cb169d36b8c28230dc7 127 Gene3D G3DSA:3.10.180.10 2 127 5.6E-26 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS00580 08c27ac4d7837cb169d36b8c28230dc7 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 9.4E-18 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL549_RS07965 7c46f07e5e1d389a6a0c8b911d122065 334 SUPERFAMILY SSF51261 41 268 3.92E-54 T 28-03-2018 IPR011055 Duplicated hybrid motif AL549_RS07965 7c46f07e5e1d389a6a0c8b911d122065 334 Pfam PF01551 Peptidase family M23 172 267 6.1E-30 T 28-03-2018 IPR016047 Peptidase M23 AL549_RS07965 7c46f07e5e1d389a6a0c8b911d122065 334 Gene3D G3DSA:2.70.70.10 66 276 2.5E-42 T 28-03-2018 AL549_RS23115 76a5f640560395c958b798b6cd70a827 200 Gene3D G3DSA:3.40.1370.10 141 198 3.5E-10 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AL549_RS23115 76a5f640560395c958b798b6cd70a827 200 Gene3D G3DSA:3.40.1370.10 2 140 7.9E-49 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AL549_RS23115 76a5f640560395c958b798b6cd70a827 200 SUPERFAMILY SSF52166 10 199 3.53E-73 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AL549_RS23115 76a5f640560395c958b798b6cd70a827 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 4.5E-65 T 28-03-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AL549_RS23115 76a5f640560395c958b798b6cd70a827 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 200 33.821 T 28-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23115 76a5f640560395c958b798b6cd70a827 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 7.9E-76 T 28-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS22585 f9c6f3f747c3f3d0fbe8d347d4e84034 468 TIGRFAM TIGR03173 pbuX: xanthine permease 29 449 1.3E-131 T 28-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 AL549_RS22585 f9c6f3f747c3f3d0fbe8d347d4e84034 468 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 365 385 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL549_RS22585 f9c6f3f747c3f3d0fbe8d347d4e84034 468 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 19 447 1.4E-125 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL549_RS22585 f9c6f3f747c3f3d0fbe8d347d4e84034 468 Pfam PF00860 Permease family 24 417 4.2E-98 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL549_RS04425 ea3e1cdfe8c2e387f157bd461545db39 348 SUPERFAMILY SSF56935 22 347 6.11E-45 T 28-03-2018 AL549_RS04425 ea3e1cdfe8c2e387f157bd461545db39 348 Gene3D G3DSA:2.40.160.10 5 347 2.4E-27 T 28-03-2018 AL549_RS17860 87eb9dc0c6a9783342713a5a3d7a9689 245 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS17860 87eb9dc0c6a9783342713a5a3d7a9689 245 Gene3D G3DSA:3.30.2350.10 1 237 2.9E-59 T 28-03-2018 AL549_RS17860 87eb9dc0c6a9783342713a5a3d7a9689 245 Pfam PF00849 RNA pseudouridylate synthase 11 170 4.1E-32 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS17860 87eb9dc0c6a9783342713a5a3d7a9689 245 SUPERFAMILY SSF55120 2 237 1.44E-61 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS06235 7b39c08df7a22d67bc071bfa26e1323b 566 SUPERFAMILY SSF53649 23 111 3.73E-62 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS06235 7b39c08df7a22d67bc071bfa26e1323b 566 SUPERFAMILY SSF53649 277 545 3.73E-62 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS06235 7b39c08df7a22d67bc071bfa26e1323b 566 SUPERFAMILY SSF53649 144 233 3.73E-62 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS06235 7b39c08df7a22d67bc071bfa26e1323b 566 PIRSF PIRSF031924 1 566 6.1E-223 T 28-03-2018 IPR026263 Alkaline phosphatase, prokaryotic GO:0004035 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL549_RS06235 7b39c08df7a22d67bc071bfa26e1323b 566 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 30 505 7.6E-82 T 28-03-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 AL549_RS06235 7b39c08df7a22d67bc071bfa26e1323b 566 Gene3D G3DSA:3.40.720.10 29 566 1.4E-49 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS19595 6189114038a784f60e1e351cb05b2eef 256 Pfam PF04794 YdjC-like protein 6 235 5.4E-51 T 28-03-2018 IPR006879 Carbohydrate deacetylase YdjC-like AL549_RS19595 6189114038a784f60e1e351cb05b2eef 256 Gene3D G3DSA:3.20.20.370 1 249 1.6E-68 T 28-03-2018 AL549_RS19595 6189114038a784f60e1e351cb05b2eef 256 SUPERFAMILY SSF88713 4 247 4.89E-67 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL549_RS19595 6189114038a784f60e1e351cb05b2eef 256 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 5 244 37.663 T 28-03-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 AL549_RS02960 49e91d3160339619bbf537e1afb06239 215 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 215 29.283 T 28-03-2018 IPR018635 Uncharacterised protein family UPF0319 AL549_RS02960 49e91d3160339619bbf537e1afb06239 215 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 210 7.1E-53 T 28-03-2018 IPR018635 Uncharacterised protein family UPF0319 AL549_RS23005 e3b05970d6a774afb6ab03683039a530 441 TIGRFAM TIGR04370 glyco_rpt_poly: oligosaccharide repeat unit polymerase 69 432 1.3E-11 T 28-03-2018 AL549_RS23005 e3b05970d6a774afb6ab03683039a530 441 Pfam PF14296 O-antigen polysaccharide polymerase Wzy 11 434 4.5E-8 T 28-03-2018 IPR029468 O-antigen polysaccharide polymerase Wzy AL549_RS01915 d9e88f2aad3ac2654497f1f2593d044e 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 250 6.2E-10 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS01915 d9e88f2aad3ac2654497f1f2593d044e 251 Gene3D G3DSA:3.40.190.10 17 251 2.2E-17 T 28-03-2018 AL549_RS01915 d9e88f2aad3ac2654497f1f2593d044e 251 SUPERFAMILY SSF53850 22 250 1.97E-23 T 28-03-2018 AL549_RS08330 28cecf7c5624474eb3ba91cc7883c5ba 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 85.456 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AL549_RS08330 28cecf7c5624474eb3ba91cc7883c5ba 487 Gene3D G3DSA:3.20.20.70 1 484 9.8E-119 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS08330 28cecf7c5624474eb3ba91cc7883c5ba 487 Pfam PF00571 CBS domain 95 140 7.2E-10 T 28-03-2018 IPR000644 CBS domain AL549_RS08330 28cecf7c5624474eb3ba91cc7883c5ba 487 Pfam PF00571 CBS domain 149 201 4.7E-4 T 28-03-2018 IPR000644 CBS domain AL549_RS08330 28cecf7c5624474eb3ba91cc7883c5ba 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.0E-196 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AL549_RS08330 28cecf7c5624474eb3ba91cc7883c5ba 487 SMART SM01240 7 473 0.0 T 28-03-2018 AL549_RS08330 28cecf7c5624474eb3ba91cc7883c5ba 487 SUPERFAMILY SSF54631 94 203 1.89E-26 T 28-03-2018 AL549_RS08330 28cecf7c5624474eb3ba91cc7883c5ba 487 PIRSF PIRSF000130 1 487 3.3E-202 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AL549_RS08330 28cecf7c5624474eb3ba91cc7883c5ba 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 1.4E-163 T 28-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AL549_RS08330 28cecf7c5624474eb3ba91cc7883c5ba 487 SMART SM00116 158 206 2.3E-5 T 28-03-2018 IPR000644 CBS domain AL549_RS08330 28cecf7c5624474eb3ba91cc7883c5ba 487 SMART SM00116 96 144 1.0E-12 T 28-03-2018 IPR000644 CBS domain AL549_RS08330 28cecf7c5624474eb3ba91cc7883c5ba 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 28-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AL549_RS08330 28cecf7c5624474eb3ba91cc7883c5ba 487 SUPERFAMILY SSF51412 217 477 8.37E-126 T 28-03-2018 AL549_RS08330 28cecf7c5624474eb3ba91cc7883c5ba 487 SUPERFAMILY SSF51412 1 90 8.37E-126 T 28-03-2018 AL549_RS10260 e7b19a6c44c97a3140f27fc74a1ef45b 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 1.1E-22 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL549_RS10260 e7b19a6c44c97a3140f27fc74a1ef45b 138 SUPERFAMILY SSF54593 3 130 6.04E-36 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS10260 e7b19a6c44c97a3140f27fc74a1ef45b 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 5 136 5.2E-68 T 28-03-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL549_RS10260 e7b19a6c44c97a3140f27fc74a1ef45b 138 Gene3D G3DSA:3.10.180.10 5 138 4.0E-37 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS10260 e7b19a6c44c97a3140f27fc74a1ef45b 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 28-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL549_RS00545 9a883ca4143ba23ef58b470d5780a88b 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AL549_RS00545 9a883ca4143ba23ef58b470d5780a88b 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 1.0E-30 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL549_RS00545 9a883ca4143ba23ef58b470d5780a88b 343 Gene3D G3DSA:3.90.180.10 1 153 4.2E-43 T 28-03-2018 AL549_RS00545 9a883ca4143ba23ef58b470d5780a88b 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 6.4E-28 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL549_RS00545 9a883ca4143ba23ef58b470d5780a88b 343 SMART SM00829 14 340 6.2E-5 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL549_RS00545 9a883ca4143ba23ef58b470d5780a88b 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 3.3E-180 T 28-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 AL549_RS00545 9a883ca4143ba23ef58b470d5780a88b 343 SUPERFAMILY SSF50129 3 175 1.13E-51 T 28-03-2018 IPR011032 GroES-like AL549_RS00545 9a883ca4143ba23ef58b470d5780a88b 343 Gene3D G3DSA:3.40.50.10730 154 308 1.9E-26 T 28-03-2018 AL549_RS00545 9a883ca4143ba23ef58b470d5780a88b 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 60.335 T 28-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 AL549_RS00545 9a883ca4143ba23ef58b470d5780a88b 343 SUPERFAMILY SSF51735 143 307 8.02E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS10965 dcd8c84286c3a64925ca048ce46e144a 400 Pfam PF13679 Methyltransferase domain 118 230 1.9E-17 T 28-03-2018 IPR025714 Methyltransferase domain AL549_RS10965 dcd8c84286c3a64925ca048ce46e144a 400 SUPERFAMILY SSF53335 119 182 1.19E-5 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS10965 dcd8c84286c3a64925ca048ce46e144a 400 Gene3D G3DSA:3.40.50.150 103 290 1.6E-4 T 28-03-2018 AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 SUPERFAMILY SSF51120 4425 4630 8.24E-15 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 SUPERFAMILY SSF158842 2364 2607 1.57E-63 T 28-03-2018 AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF11713 Peptidase C80 family 3616 3772 4.0E-53 T 28-03-2018 IPR020974 CGT/MARTX, cysteine protease (CPD) domain AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 SUPERFAMILY SSF53474 2993 3108 1.49E-22 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 SUPERFAMILY SSF51120 4340 4432 1.31E-5 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF12146 Serine aminopeptidase, S33 2997 3111 8.0E-10 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 1220 1236 3.3 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 1067 1079 5.4 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 877 891 0.19 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 991 1006 0.11 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 759 769 4.5 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 187 204 0.32 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 934 950 9.2 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 1184 1199 0.016 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 1087 1102 0.25 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 141 157 0.015 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 101 118 0.35 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 1242 1256 38.0 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 275 288 0.54 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 801 816 0.05 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 915 932 0.64 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 972 984 7.2 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 584 600 1.2 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 1296 1313 0.0074 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 741 754 0.14 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 1201 1217 0.0032 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 1110 1122 6.3 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 858 875 0.47 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 896 910 3.8 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 953 968 0.14 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 624 641 0.046 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 1031 1043 0.39 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 782 799 0.14 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 121 138 0.013 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 161 184 0.0012 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 1258 1275 2.0 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 604 620 7.9 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 207 224 0.52 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 820 835 0.08 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 1315 1332 1.2 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 644 658 3.7 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 1125 1142 0.094 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 1144 1159 0.51 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 255 272 3.3 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 1163 1179 0.04 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF07634 RtxA repeat 839 855 0.21 T 28-03-2018 IPR011509 RtxA toxin AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Gene3D G3DSA:3.40.50.1820 2661 3209 1.8E-22 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Gene3D G3DSA:2.60.120.260 1457 1618 1.4E-13 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Pfam PF11647 Membrane Localization Domain 2380 2449 9.7E-27 T 28-03-2018 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Gene3D G3DSA:2.150.10.10 4447 4650 3.1E-7 T 28-03-2018 AL549_RS04895 b6dd6aa3deba09095d5b1e593fcd9eca 4703 Gene3D G3DSA:2.150.10.10 4241 4446 3.6E-6 T 28-03-2018 AL549_RS14840 7181e0ead9163eb3463d025b8e9a721a 52 Pfam PF11665 Protein of unknown function (DUF3265) 10 36 5.1E-7 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS10230 4b9063b40e17263d5da73862e1001659 117 Gene3D G3DSA:3.40.30.10 6 117 1.9E-30 T 28-03-2018 AL549_RS10230 4b9063b40e17263d5da73862e1001659 117 Pfam PF00462 Glutaredoxin 21 85 4.0E-17 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL549_RS10230 4b9063b40e17263d5da73862e1001659 117 SUPERFAMILY SSF52833 6 109 2.02E-34 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS10230 4b9063b40e17263d5da73862e1001659 117 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 9 105 3.1E-46 T 28-03-2018 IPR004480 Monothiol glutaredoxin-related AL549_RS10230 4b9063b40e17263d5da73862e1001659 117 PIRSF PIRSF005894 2 112 1.1E-52 T 28-03-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 AL549_RS19785 ca13651ec2cc9718b6e09255eb2fe012 229 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 6.1E-5 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS19785 ca13651ec2cc9718b6e09255eb2fe012 229 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS19785 ca13651ec2cc9718b6e09255eb2fe012 229 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 4.3E-5 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS20900 6d6610a796810f1a68596c68e4f1998e 362 SUPERFAMILY SSF54631 181 315 8.1E-25 T 28-03-2018 AL549_RS20900 6d6610a796810f1a68596c68e4f1998e 362 Pfam PF01595 Domain of unknown function DUF21 9 177 4.0E-29 T 28-03-2018 IPR002550 Domain of unknown function DUF21 AL549_RS20900 6d6610a796810f1a68596c68e4f1998e 362 Pfam PF00571 CBS domain 262 313 4.3E-6 T 28-03-2018 IPR000644 CBS domain AL549_RS20900 6d6610a796810f1a68596c68e4f1998e 362 Gene3D G3DSA:3.20.20.70 154 353 8.2E-28 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS11350 63ebf765c3dc85ce43a64f3bdaa95814 475 SUPERFAMILY SSF161070 9 457 3.14E-129 T 28-03-2018 AL549_RS11350 63ebf765c3dc85ce43a64f3bdaa95814 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 90 116 3.8E-12 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS11350 63ebf765c3dc85ce43a64f3bdaa95814 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 334 3.8E-12 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS11350 63ebf765c3dc85ce43a64f3bdaa95814 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 17 38 3.8E-12 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS11350 63ebf765c3dc85ce43a64f3bdaa95814 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 46 65 3.8E-12 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS11350 63ebf765c3dc85ce43a64f3bdaa95814 475 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 33 47 - T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS11350 63ebf765c3dc85ce43a64f3bdaa95814 475 Pfam PF00209 Sodium:neurotransmitter symporter family 149 447 3.3E-32 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS11350 63ebf765c3dc85ce43a64f3bdaa95814 475 Pfam PF00209 Sodium:neurotransmitter symporter family 9 119 1.7E-21 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS16060 27a9e88eff792749a0374cb2a061df6c 120 SUPERFAMILY SSF55620 2 118 5.56E-41 T 28-03-2018 AL549_RS16060 27a9e88eff792749a0374cb2a061df6c 120 Gene3D G3DSA:3.30.479.10 1 120 1.3E-41 T 28-03-2018 AL549_RS16060 27a9e88eff792749a0374cb2a061df6c 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 1.7E-35 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AL549_RS16060 27a9e88eff792749a0374cb2a061df6c 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 6.4E-33 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AL549_RS16060 27a9e88eff792749a0374cb2a061df6c 120 PIRSF PIRSF006113 1 120 2.9E-53 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AL549_RS16125 a2412d07582d2579254e3a19353531e4 523 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 520 6.1E-136 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AL549_RS16125 a2412d07582d2579254e3a19353531e4 523 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 28-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AL549_RS16125 a2412d07582d2579254e3a19353531e4 523 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 1.2E-173 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AL549_RS09375 d89956c3f398f851c28087b4899faa9e 530 SUPERFAMILY SSF51735 387 518 1.36E-15 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS09375 d89956c3f398f851c28087b4899faa9e 530 Pfam PF02254 TrkA-N domain 388 504 3.9E-19 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL549_RS09375 d89956c3f398f851c28087b4899faa9e 530 Pfam PF00999 Sodium/hydrogen exchanger family 3 350 5.3E-35 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL549_RS09375 d89956c3f398f851c28087b4899faa9e 530 Gene3D G3DSA:3.40.50.720 379 527 1.9E-16 T 28-03-2018 AL549_RS09375 d89956c3f398f851c28087b4899faa9e 530 Gene3D G3DSA:1.20.91.10 210 284 1.8E-4 T 28-03-2018 AL549_RS16945 d9439d75cdaa91b5c6762188ea80db57 445 Pfam PF13520 Amino acid permease 8 421 1.5E-36 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL549_RS16945 d9439d75cdaa91b5c6762188ea80db57 445 PIRSF PIRSF006060 1 433 2.4E-49 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL549_RS10010 bc5437082e3181f6e32955d193518691 1015 Gene3D G3DSA:2.60.40.1080 227 301 0.12 T 28-03-2018 AL549_RS10010 bc5437082e3181f6e32955d193518691 1015 Gene3D G3DSA:2.60.40.1080 438 555 0.023 T 28-03-2018 AL549_RS22165 1262b9f742d428b27236aa89b6c423f9 304 Pfam PF00892 EamA-like transporter family 155 287 1.6E-6 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS22165 1262b9f742d428b27236aa89b6c423f9 304 Pfam PF00892 EamA-like transporter family 12 145 7.3E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS22165 1262b9f742d428b27236aa89b6c423f9 304 TIGRFAM TIGR00688 rarD: protein RarD 11 264 7.4E-88 T 28-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 AL549_RS22165 1262b9f742d428b27236aa89b6c423f9 304 SUPERFAMILY SSF103481 192 291 2.48E-7 T 28-03-2018 AL549_RS22165 1262b9f742d428b27236aa89b6c423f9 304 SUPERFAMILY SSF103481 50 145 4.18E-13 T 28-03-2018 AL549_RS21380 cd1d33a529ccb3837dca586275e76bad 141 SUPERFAMILY SSF52402 3 138 4.19E-33 T 28-03-2018 AL549_RS21380 cd1d33a529ccb3837dca586275e76bad 141 Gene3D G3DSA:3.40.50.620 2 141 5.3E-25 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS21380 cd1d33a529ccb3837dca586275e76bad 141 Pfam PF00582 Universal stress protein family 3 138 1.5E-21 T 28-03-2018 IPR006016 UspA GO:0006950 AL549_RS21380 cd1d33a529ccb3837dca586275e76bad 141 PIRSF PIRSF006276 1 141 4.4E-53 T 28-03-2018 IPR006015 Universal stress protein A AL549_RS00960 91ec057917ee92ee92bb9a23d0d06e00 281 SMART SM00849 35 216 3.5E-15 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS00960 91ec057917ee92ee92bb9a23d0d06e00 281 Pfam PF00753 Metallo-beta-lactamase superfamily 34 216 6.2E-10 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS00960 91ec057917ee92ee92bb9a23d0d06e00 281 Gene3D G3DSA:3.60.15.10 11 244 3.1E-18 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS00960 91ec057917ee92ee92bb9a23d0d06e00 281 SUPERFAMILY SSF56281 22 237 1.45E-33 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS12780 00a19241c840e22b0107dcb54cc0dec5 67 Pfam PF14255 Cysteine-rich CPXCG 10 59 5.3E-20 T 28-03-2018 IPR025990 Cysteine-rich CPXCG protein AL549_RS12780 00a19241c840e22b0107dcb54cc0dec5 67 PIRSF PIRSF037225 1 65 7.4E-28 T 28-03-2018 IPR017143 Uncharacterised conserved protein UCP037225 AL549_RS11195 58801bd1577aee1d964117f61f42b50d 141 Pfam PF05232 Chlorhexidine efflux transporter 2 63 7.9E-22 T 28-03-2018 IPR007896 Chlorhexidine efflux transporter AL549_RS11195 58801bd1577aee1d964117f61f42b50d 141 Pfam PF05232 Chlorhexidine efflux transporter 69 131 2.7E-22 T 28-03-2018 IPR007896 Chlorhexidine efflux transporter AL549_RS23315 d300f7dc3a5767162a945c951918f3a5 419 Pfam PF02687 FtsX-like permease family 317 410 7.6E-11 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL549_RS23315 d300f7dc3a5767162a945c951918f3a5 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 8.0E-11 T 28-03-2018 IPR025857 MacB-like periplasmic core domain AL549_RS07945 9f2a0de1aae8669e32b21e4f3736ba75 370 Gene3D G3DSA:3.30.420.40 197 370 1.9E-29 T 28-03-2018 AL549_RS07945 9f2a0de1aae8669e32b21e4f3736ba75 370 Gene3D G3DSA:3.30.420.40 4 185 2.3E-58 T 28-03-2018 AL549_RS07945 9f2a0de1aae8669e32b21e4f3736ba75 370 SUPERFAMILY SSF53067 6 40 2.59E-29 T 28-03-2018 AL549_RS07945 9f2a0de1aae8669e32b21e4f3736ba75 370 SUPERFAMILY SSF53067 67 112 2.59E-29 T 28-03-2018 AL549_RS07945 9f2a0de1aae8669e32b21e4f3736ba75 370 SUPERFAMILY SSF53067 144 344 2.59E-29 T 28-03-2018 AL549_RS07945 9f2a0de1aae8669e32b21e4f3736ba75 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 42.685 T 28-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 AL549_RS07945 9f2a0de1aae8669e32b21e4f3736ba75 370 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 6 369 1.0E-167 T 28-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 AL549_RS21720 770181c6141896912fcbeb419fab2839 359 Gene3D G3DSA:3.40.50.300 1 359 3.6E-33 T 28-03-2018 AL549_RS21720 770181c6141896912fcbeb419fab2839 359 SUPERFAMILY SSF52540 1 344 3.9E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS21720 770181c6141896912fcbeb419fab2839 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 354 1.1E-121 T 28-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AL549_RS21720 770181c6141896912fcbeb419fab2839 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 98.939 T 28-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AL549_RS21720 770181c6141896912fcbeb419fab2839 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 355 4.0E-38 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal AL549_RS21720 770181c6141896912fcbeb419fab2839 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 28-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AL549_RS21720 770181c6141896912fcbeb419fab2839 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 28-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AL549_RS11885 0787c04a6a0e310907ae9964ebf82008 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 288 7.2E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS11885 0787c04a6a0e310907ae9964ebf82008 293 SUPERFAMILY SSF161098 55 282 1.44E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS11885 0787c04a6a0e310907ae9964ebf82008 293 Gene3D G3DSA:1.10.3720.10 62 292 5.0E-28 T 28-03-2018 AL549_RS11885 0787c04a6a0e310907ae9964ebf82008 293 Gene3D G3DSA:1.20.58.370 4 41 5.4E-4 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain AL549_RS16215 e0b60e6311dbf07faa967cceaebe94e4 310 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 270 8.8E-26 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL549_RS16215 e0b60e6311dbf07faa967cceaebe94e4 310 Gene3D G3DSA:1.10.3470.10 3 287 4.2E-29 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL549_RS16665 0bd5ea38543ca96da78d256df0706480 106 Gene3D G3DSA:3.30.1390.10 13 105 2.0E-36 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL549_RS16665 0bd5ea38543ca96da78d256df0706480 106 SUPERFAMILY SSF54736 21 105 6.8E-32 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL549_RS16665 0bd5ea38543ca96da78d256df0706480 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 101 27.258 T 28-03-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AL549_RS16665 0bd5ea38543ca96da78d256df0706480 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 3.7E-34 T 28-03-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 AL549_RS18045 b4fd334ae7c13910daa7eb2dce1d879d 189 Pfam PF03923 Uncharacterized lipoprotein 28 186 1.5E-51 T 28-03-2018 IPR005619 Uncharacterised protein family, YajG AL549_RS20060 ae5be97997a1231d6562ea70bef35c2b 100 Hamap MF_00720 Primosomal replication protein N [priB]. 2 100 22.252 T 28-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AL549_RS20060 ae5be97997a1231d6562ea70bef35c2b 100 SUPERFAMILY SSF50249 1 98 2.5E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS20060 ae5be97997a1231d6562ea70bef35c2b 100 PIRSF PIRSF003135 1 100 1.7E-45 T 28-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AL549_RS20060 ae5be97997a1231d6562ea70bef35c2b 100 Pfam PF00436 Single-strand binding protein family 3 87 8.4E-8 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AL549_RS20060 ae5be97997a1231d6562ea70bef35c2b 100 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 97 1.4E-32 T 28-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AL549_RS20060 ae5be97997a1231d6562ea70bef35c2b 100 Gene3D G3DSA:2.40.50.140 1 100 1.3E-8 T 28-03-2018 AL549_RS19690 808052d4dc11742f7ed6ddbca23bbd8e 406 SUPERFAMILY SSF55909 3 406 2.86E-129 T 28-03-2018 AL549_RS19690 808052d4dc11742f7ed6ddbca23bbd8e 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 4.2E-44 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL549_RS19690 808052d4dc11742f7ed6ddbca23bbd8e 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 4.2E-44 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL549_RS19690 808052d4dc11742f7ed6ddbca23bbd8e 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 4.2E-44 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL549_RS19690 808052d4dc11742f7ed6ddbca23bbd8e 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 4.2E-44 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL549_RS19690 808052d4dc11742f7ed6ddbca23bbd8e 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 4.2E-44 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL549_RS19690 808052d4dc11742f7ed6ddbca23bbd8e 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 4.2E-44 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL549_RS19690 808052d4dc11742f7ed6ddbca23bbd8e 406 Pfam PF02274 Amidinotransferase 18 403 2.3E-111 T 28-03-2018 AL549_RS19690 808052d4dc11742f7ed6ddbca23bbd8e 406 Gene3D G3DSA:3.75.10.10 3 404 4.7E-97 T 28-03-2018 AL549_RS19690 808052d4dc11742f7ed6ddbca23bbd8e 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 45.034 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL549_RS19690 808052d4dc11742f7ed6ddbca23bbd8e 406 PIRSF PIRSF006356 1 406 6.9E-159 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL549_RS19690 808052d4dc11742f7ed6ddbca23bbd8e 406 TIGRFAM TIGR01078 arcA: arginine deiminase 4 406 1.3E-171 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL549_RS04815 acb537064620a93267cfb010c005213d 129 SUPERFAMILY SSF46955 4 118 2.05E-26 T 28-03-2018 IPR009061 Putative DNA-binding domain AL549_RS04815 acb537064620a93267cfb010c005213d 129 Gene3D G3DSA:1.10.1660.10 57 129 9.6E-14 T 28-03-2018 AL549_RS04815 acb537064620a93267cfb010c005213d 129 Gene3D G3DSA:1.10.1660.10 1 56 2.4E-19 T 28-03-2018 AL549_RS04815 acb537064620a93267cfb010c005213d 129 SMART SM00422 4 71 1.3E-19 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS04815 acb537064620a93267cfb010c005213d 129 Pfam PF13411 MerR HTH family regulatory protein 4 69 6.0E-17 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL549_RS09370 dc188146b7f82c5e399cfd12ffc09c73 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 2.3E-40 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain AL549_RS09370 dc188146b7f82c5e399cfd12ffc09c73 554 Gene3D G3DSA:3.40.50.620 192 514 6.2E-85 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS09370 dc188146b7f82c5e399cfd12ffc09c73 554 SUPERFAMILY SSF56235 1 196 2.06E-57 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL549_RS09370 dc188146b7f82c5e399cfd12ffc09c73 554 PIRSF PIRSF001589 1 371 3.1E-104 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AL549_RS09370 dc188146b7f82c5e399cfd12ffc09c73 554 PIRSF PIRSF001589 362 507 3.7E-27 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AL549_RS09370 dc188146b7f82c5e399cfd12ffc09c73 554 Gene3D G3DSA:3.60.20.10 2 191 1.1E-49 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL549_RS09370 dc188146b7f82c5e399cfd12ffc09c73 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 1.7E-115 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AL549_RS09370 dc188146b7f82c5e399cfd12ffc09c73 554 SUPERFAMILY SSF52402 209 479 1.39E-73 T 28-03-2018 AL549_RS09370 dc188146b7f82c5e399cfd12ffc09c73 554 Pfam PF00733 Asparagine synthase 212 511 2.8E-96 T 28-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AL549_RS07725 a4dea1c46db27b087ebc138f48a184b5 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 85 368 3.1E-23 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL549_RS07725 a4dea1c46db27b087ebc138f48a184b5 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AL549_RS07725 a4dea1c46db27b087ebc138f48a184b5 426 Gene3D G3DSA:3.40.50.1100 195 318 5.0E-43 T 28-03-2018 AL549_RS07725 a4dea1c46db27b087ebc138f48a184b5 426 Gene3D G3DSA:3.40.50.1100 319 393 1.2E-12 T 28-03-2018 AL549_RS07725 a4dea1c46db27b087ebc138f48a184b5 426 Pfam PF14821 Threonine synthase N terminus 8 78 5.1E-8 T 28-03-2018 IPR029144 Threonine synthase, N-terminal AL549_RS07725 a4dea1c46db27b087ebc138f48a184b5 426 Gene3D G3DSA:3.40.50.1100 99 194 1.9E-19 T 28-03-2018 AL549_RS07725 a4dea1c46db27b087ebc138f48a184b5 426 Gene3D G3DSA:3.90.1380.10 1 79 3.0E-14 T 28-03-2018 IPR029144 Threonine synthase, N-terminal AL549_RS07725 a4dea1c46db27b087ebc138f48a184b5 426 SUPERFAMILY SSF53686 1 424 6.16E-132 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL549_RS07725 a4dea1c46db27b087ebc138f48a184b5 426 TIGRFAM TIGR00260 thrC: threonine synthase 53 391 1.2E-114 T 28-03-2018 IPR004450 Threonine synthase-like AL549_RS16180 03b090cffa7c63ab369ff1c331df5b0e 529 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 0.0 T 28-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AL549_RS16180 03b090cffa7c63ab369ff1c331df5b0e 529 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 529 381.941 T 28-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AL549_RS16180 03b090cffa7c63ab369ff1c331df5b0e 529 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 516 2.3E-300 T 28-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AL549_RS17925 36b9b16e65cccd7c2f26c12932b7cd88 528 Pfam PF03806 AbgT putative transporter family 19 526 3.2E-229 T 28-03-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 AL549_RS01710 ed14695a576f4d47c8fe97641604ed9c 602 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 435 589 1.3E-26 T 28-03-2018 IPR000160 GGDEF domain AL549_RS01710 ed14695a576f4d47c8fe97641604ed9c 602 SUPERFAMILY SSF55073 441 590 9.42E-31 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS01710 ed14695a576f4d47c8fe97641604ed9c 602 Gene3D G3DSA:3.30.450.20 19 274 6.3E-12 T 28-03-2018 AL549_RS01710 ed14695a576f4d47c8fe97641604ed9c 602 Pfam PF17201 Cache 3/Cache 2 fusion domain 174 269 7.5E-7 T 28-03-2018 IPR033462 Cache 3/Cache 2 fusion domain AL549_RS01710 ed14695a576f4d47c8fe97641604ed9c 602 Pfam PF00990 Diguanylate cyclase, GGDEF domain 437 587 2.3E-26 T 28-03-2018 IPR000160 GGDEF domain AL549_RS01710 ed14695a576f4d47c8fe97641604ed9c 602 Gene3D G3DSA:3.30.70.270 431 599 3.5E-37 T 28-03-2018 AL549_RS01710 ed14695a576f4d47c8fe97641604ed9c 602 SMART SM00267 423 591 2.2E-28 T 28-03-2018 IPR000160 GGDEF domain AL549_RS08775 426ed1402ca1119852e7991333ba95a4 474 Pfam PF02378 Phosphotransferase system, EIIC 112 404 2.0E-33 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL549_RS08775 426ed1402ca1119852e7991333ba95a4 474 Gene3D G3DSA:3.30.1360.60 5 78 6.4E-24 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL549_RS08775 426ed1402ca1119852e7991333ba95a4 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 461 1.2E-202 T 28-03-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00230+2.7.1.20|KEGG: 00500+2.7.1.201|MetaCyc: PWY-6619 AL549_RS08775 426ed1402ca1119852e7991333ba95a4 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL549_RS08775 426ed1402ca1119852e7991333ba95a4 474 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 7.2E-14 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL549_RS08775 426ed1402ca1119852e7991333ba95a4 474 Pfam PF00367 phosphotransferase system, EIIB 11 43 5.4E-14 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL549_RS08775 426ed1402ca1119852e7991333ba95a4 474 SUPERFAMILY SSF55604 9 81 1.29E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL549_RS21290 240b2f61474fac4e2d6915dda854ab58 516 PIRSF PIRSF028175 1 516 0.0 T 28-03-2018 IPR014540 Uncharacterised conserved protein UCP028175 AL549_RS21290 240b2f61474fac4e2d6915dda854ab58 516 Gene3D G3DSA:2.130.10.130 118 510 4.4E-4 T 28-03-2018 AL549_RS02780 a900f93614d181c1a22ddbdb4a8d2d30 344 PIRSF PIRSF005632 1 344 8.2E-194 T 28-03-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit AL549_RS02780 a900f93614d181c1a22ddbdb4a8d2d30 344 Gene3D G3DSA:3.20.20.210 1 344 2.0E-90 T 28-03-2018 AL549_RS02780 a900f93614d181c1a22ddbdb4a8d2d30 344 SUPERFAMILY SSF51726 9 343 7.06E-70 T 28-03-2018 AL549_RS02780 a900f93614d181c1a22ddbdb4a8d2d30 344 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 7 331 5.3E-37 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL549_RS22590 811f6a4dda4d8ce5bd0283d9123166b0 693 SUPERFAMILY SSF52540 214 453 1.8E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS22590 811f6a4dda4d8ce5bd0283d9123166b0 693 Gene3D G3DSA:2.40.50.140 55 143 2.1E-14 T 28-03-2018 AL549_RS22590 811f6a4dda4d8ce5bd0283d9123166b0 693 SMART SM00490 505 589 6.5E-23 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS22590 811f6a4dda4d8ce5bd0283d9123166b0 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 1.4E-17 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS22590 811f6a4dda4d8ce5bd0283d9123166b0 693 Pfam PF17191 RecG wedge domain 14 171 6.6E-21 T 28-03-2018 IPR033454 RecG, wedge domain AL549_RS22590 811f6a4dda4d8ce5bd0283d9123166b0 693 Gene3D G3DSA:3.40.50.300 254 456 9.6E-37 T 28-03-2018 AL549_RS22590 811f6a4dda4d8ce5bd0283d9123166b0 693 SUPERFAMILY SSF52540 508 653 2.42E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS22590 811f6a4dda4d8ce5bd0283d9123166b0 693 SUPERFAMILY SSF52540 292 342 2.42E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS22590 811f6a4dda4d8ce5bd0283d9123166b0 693 SUPERFAMILY SSF50249 9 174 8.39E-40 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS22590 811f6a4dda4d8ce5bd0283d9123166b0 693 Gene3D G3DSA:3.40.50.300 457 630 2.1E-29 T 28-03-2018 AL549_RS22590 811f6a4dda4d8ce5bd0283d9123166b0 693 SMART SM00487 265 459 2.3E-31 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS22590 811f6a4dda4d8ce5bd0283d9123166b0 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 665 5.2E-235 T 28-03-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AL549_RS22590 811f6a4dda4d8ce5bd0283d9123166b0 693 Gene3D G3DSA:1.10.150.20 3 54 2.4E-4 T 28-03-2018 AL549_RS22590 811f6a4dda4d8ce5bd0283d9123166b0 693 Pfam PF00270 DEAD/DEAH box helicase 271 433 3.6E-18 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL549_RS05045 bd639a8daa70f40b6be035bb2b919eb7 432 SUPERFAMILY SSF49879 50 139 1.99E-20 T 28-03-2018 IPR008984 SMAD/FHA domain GO:0005515 AL549_RS05045 bd639a8daa70f40b6be035bb2b919eb7 432 Gene3D G3DSA:2.60.200.20 43 155 6.3E-18 T 28-03-2018 AL549_RS05045 bd639a8daa70f40b6be035bb2b919eb7 432 Pfam PF00498 FHA domain 62 130 3.3E-15 T 28-03-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AL549_RS05045 bd639a8daa70f40b6be035bb2b919eb7 432 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 32 427 1.2E-125 T 28-03-2018 IPR017735 Type VI secretion system, FHA domain-containing protein AL549_RS05045 bd639a8daa70f40b6be035bb2b919eb7 432 SMART SM00240 60 111 8.1E-9 T 28-03-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AL549_RS00820 73d34c8878a878f7507c6148925f5fb6 98 SUPERFAMILY SSF81296 12 95 3.83E-14 T 28-03-2018 IPR014756 Immunoglobulin E-set AL549_RS00820 73d34c8878a878f7507c6148925f5fb6 98 Gene3D G3DSA:2.60.40.10 4 98 1.9E-16 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS03560 245eb4f75fb83fa0e80f5648b4e68e68 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 4.8E-67 T 28-03-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AL549_RS03560 245eb4f75fb83fa0e80f5648b4e68e68 301 Gene3D G3DSA:3.30.470.20 171 277 1.2E-35 T 28-03-2018 AL549_RS03560 245eb4f75fb83fa0e80f5648b4e68e68 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 286 2.1E-84 T 28-03-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 AL549_RS03560 245eb4f75fb83fa0e80f5648b4e68e68 301 Gene3D G3DSA:3.40.50.20 1 114 2.3E-37 T 28-03-2018 AL549_RS03560 245eb4f75fb83fa0e80f5648b4e68e68 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.247 T 28-03-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK AL549_RS03560 245eb4f75fb83fa0e80f5648b4e68e68 301 Gene3D G3DSA:3.30.1490.20 115 170 1.1E-10 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL549_RS03560 245eb4f75fb83fa0e80f5648b4e68e68 301 SUPERFAMILY SSF56059 98 288 3.36E-50 T 28-03-2018 AL549_RS17785 2fdb0eb0b60f7bd55d38061cbdf4e589 150 SUPERFAMILY SSF54637 7 146 5.89E-49 T 28-03-2018 IPR029069 HotDog domain AL549_RS17785 2fdb0eb0b60f7bd55d38061cbdf4e589 150 Gene3D G3DSA:3.10.129.10 1 149 3.8E-53 T 28-03-2018 AL549_RS17785 2fdb0eb0b60f7bd55d38061cbdf4e589 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.549 T 28-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL549_RS17785 2fdb0eb0b60f7bd55d38061cbdf4e589 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 5.9E-60 T 28-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL549_RS17785 2fdb0eb0b60f7bd55d38061cbdf4e589 150 Pfam PF07977 FabA-like domain 17 141 1.7E-39 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL549_RS00810 c0f4ab5f4aa0ad34f8bcd108015972e9 200 SUPERFAMILY SSF52833 23 198 4.29E-44 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS00810 c0f4ab5f4aa0ad34f8bcd108015972e9 200 Pfam PF01323 DSBA-like thioredoxin domain 41 189 2.4E-22 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AL549_RS00810 c0f4ab5f4aa0ad34f8bcd108015972e9 200 PIRSF PIRSF001488 2 200 7.4E-63 T 28-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AL549_RS00810 c0f4ab5f4aa0ad34f8bcd108015972e9 200 ProSitePatterns PS00194 Thioredoxin family active site. 42 60 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL549_RS00810 c0f4ab5f4aa0ad34f8bcd108015972e9 200 Gene3D G3DSA:3.40.30.10 18 200 1.0E-40 T 28-03-2018 AL549_RS03850 f04ed5c9c5371e89c97db58ddc073d73 407 Gene3D G3DSA:2.40.50.100 70 137 4.4E-11 T 28-03-2018 AL549_RS03850 f04ed5c9c5371e89c97db58ddc073d73 407 Pfam PF13533 Biotin-lipoyl like 71 110 4.8E-10 T 28-03-2018 AL549_RS03850 f04ed5c9c5371e89c97db58ddc073d73 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 227 321 1.3E-7 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL549_RS03850 f04ed5c9c5371e89c97db58ddc073d73 407 SUPERFAMILY SSF111369 64 154 1.83E-8 T 28-03-2018 AL549_RS03850 f04ed5c9c5371e89c97db58ddc073d73 407 SUPERFAMILY SSF111369 198 293 1.7E-6 T 28-03-2018 AL549_RS03850 f04ed5c9c5371e89c97db58ddc073d73 407 Gene3D G3DSA:1.20.1600.10 209 341 3.7E-13 T 28-03-2018 AL549_RS12555 ddbfa69288e9f28014dc6fe192b21531 220 Pfam PF11205 Protein of unknown function (DUF2987) 22 166 1.1E-53 T 28-03-2018 IPR021370 Protein of unknown function DUF2987 AL549_RS14275 45b5efdca0919f2a15c48259961d176a 36 Pfam PF11665 Protein of unknown function (DUF3265) 10 36 1.6E-6 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS08445 661d7d31252debcb2e20ef56dff4ccc7 119 Pfam PF04355 SmpA / OmlA family 35 102 6.2E-26 T 28-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AL549_RS08445 661d7d31252debcb2e20ef56dff4ccc7 119 Gene3D G3DSA:3.30.1450.10 35 104 7.8E-13 T 28-03-2018 AL549_RS08445 661d7d31252debcb2e20ef56dff4ccc7 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 32.317 T 28-03-2018 IPR026592 Outer membrane protein assembly factor BamE AL549_RS20695 336b51de221f533089d85655cdcaa31c 164 Pfam PF02308 MgtC family 19 141 6.4E-29 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL549_RS20695 336b51de221f533089d85655cdcaa31c 164 PRINTS PR01837 MgtC/SapB protein signature 41 59 1.7E-30 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL549_RS20695 336b51de221f533089d85655cdcaa31c 164 PRINTS PR01837 MgtC/SapB protein signature 22 41 1.7E-30 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL549_RS20695 336b51de221f533089d85655cdcaa31c 164 PRINTS PR01837 MgtC/SapB protein signature 68 90 1.7E-30 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL549_RS20695 336b51de221f533089d85655cdcaa31c 164 PRINTS PR01837 MgtC/SapB protein signature 95 119 1.7E-30 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL549_RS08740 3fa0223e91c2d3ba0e42174d019eaaef 181 Hamap MF_01104 Protein Syd [syd]. 3 181 36.977 T 28-03-2018 IPR009948 Syd GO:0009898 AL549_RS08740 3fa0223e91c2d3ba0e42174d019eaaef 181 Pfam PF07348 Syd protein (SUKH-2) 8 179 3.1E-68 T 28-03-2018 IPR009948 Syd GO:0009898 AL549_RS05770 4289e070a46c853acd9a7a6d81682775 823 Pfam PF12704 MacB-like periplasmic core domain 39 202 3.0E-7 T 28-03-2018 IPR025857 MacB-like periplasmic core domain AL549_RS05770 4289e070a46c853acd9a7a6d81682775 823 Pfam PF02687 FtsX-like permease family 731 813 7.0E-7 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL549_RS05770 4289e070a46c853acd9a7a6d81682775 823 Pfam PF02687 FtsX-like permease family 289 381 3.4E-7 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL549_RS13255 d311186ade70dbe868f3e15cb317cfa0 119 SUPERFAMILY SSF50044 8 66 1.18E-7 T 28-03-2018 IPR001452 SH3 domain GO:0005515 AL549_RS13255 d311186ade70dbe868f3e15cb317cfa0 119 PIRSF PIRSF034961 7 119 3.1E-28 T 28-03-2018 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 AL549_RS13255 d311186ade70dbe868f3e15cb317cfa0 119 Gene3D G3DSA:2.30.30.40 73 119 1.2E-4 T 28-03-2018 AL549_RS13255 d311186ade70dbe868f3e15cb317cfa0 119 Pfam PF07653 Variant SH3 domain 9 63 3.6E-6 T 28-03-2018 IPR011511 Variant SH3 domain AL549_RS13255 d311186ade70dbe868f3e15cb317cfa0 119 Gene3D G3DSA:2.30.30.40 7 70 1.9E-5 T 28-03-2018 AL549_RS13255 d311186ade70dbe868f3e15cb317cfa0 119 SUPERFAMILY SSF50044 75 117 5.03E-6 T 28-03-2018 IPR001452 SH3 domain GO:0005515 AL549_RS00255 c1284759e988e051998d9d3054062375 483 Pfam PF07603 Protein of unknown function (DUF1566) 296 435 3.6E-17 T 28-03-2018 IPR011460 Protein of unknown function DUF1566 AL549_RS03860 9451328dfddd56849f5e25f7a458b331 336 SMART SM00342 248 329 2.0E-13 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS03860 9451328dfddd56849f5e25f7a458b331 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 313 329 4.1E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS03860 9451328dfddd56849f5e25f7a458b331 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 298 313 4.1E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS03860 9451328dfddd56849f5e25f7a458b331 336 Gene3D G3DSA:1.10.10.60 172 277 0.017 T 28-03-2018 AL549_RS03860 9451328dfddd56849f5e25f7a458b331 336 Pfam PF12833 Helix-turn-helix domain 255 331 3.1E-14 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS03860 9451328dfddd56849f5e25f7a458b331 336 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 30 195 5.6E-11 T 28-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AL549_RS03860 9451328dfddd56849f5e25f7a458b331 336 Gene3D G3DSA:1.10.10.60 284 333 1.6E-11 T 28-03-2018 AL549_RS03860 9451328dfddd56849f5e25f7a458b331 336 SUPERFAMILY SSF46689 287 333 1.25E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS15765 a4e98484038571c17f24906ea790b66a 234 Gene3D G3DSA:1.10.340.30 36 163 2.1E-23 T 28-03-2018 AL549_RS15765 a4e98484038571c17f24906ea790b66a 234 Pfam PF03352 Methyladenine glycosylase 43 134 1.5E-15 T 28-03-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AL549_RS15765 a4e98484038571c17f24906ea790b66a 234 SUPERFAMILY SSF48150 39 184 2.2E-38 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL549_RS18780 9b51b37684e389d39752239017a8f6a5 421 Pfam PF02447 GntP family permease 9 414 2.9E-23 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL549_RS11095 22512e40c126a1021deed6740c35753a 434 SUPERFAMILY SSF53613 338 417 1.34E-43 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS11095 22512e40c126a1021deed6740c35753a 434 SUPERFAMILY SSF53613 31 305 1.34E-43 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS11095 22512e40c126a1021deed6740c35753a 434 Pfam PF00294 pfkB family carbohydrate kinase 77 292 7.5E-10 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AL549_RS11095 22512e40c126a1021deed6740c35753a 434 Gene3D G3DSA:3.40.1190.20 32 431 5.7E-41 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS22390 2d49101366c3baf9606464c59f4e96fc 463 Gene3D G3DSA:3.20.20.70 43 359 3.8E-46 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS22390 2d49101366c3baf9606464c59f4e96fc 463 PIRSF PIRSF000167 9 460 5.3E-172 T 28-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 AL549_RS22390 2d49101366c3baf9606464c59f4e96fc 463 Pfam PF06969 HemN C-terminal domain 369 437 7.5E-11 T 28-03-2018 IPR010723 HemN, C-terminal AL549_RS22390 2d49101366c3baf9606464c59f4e96fc 463 Pfam PF04055 Radical SAM superfamily 63 234 3.7E-18 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS22390 2d49101366c3baf9606464c59f4e96fc 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 14 463 9.5E-208 T 28-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 AL549_RS22390 2d49101366c3baf9606464c59f4e96fc 463 SMART SM00729 58 278 4.4E-51 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL549_RS22390 2d49101366c3baf9606464c59f4e96fc 463 SUPERFAMILY SSF102114 12 450 3.01E-142 T 28-03-2018 AL549_RS16120 4fad81ac4501dfaddf95c0e122f2f121 627 SUPERFAMILY SSF58104 318 627 3.14E-76 T 28-03-2018 AL549_RS16120 4fad81ac4501dfaddf95c0e122f2f121 627 SMART SM00304 296 350 6.3E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS16120 4fad81ac4501dfaddf95c0e122f2f121 627 SMART SM00304 353 403 3.3 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS16120 4fad81ac4501dfaddf95c0e122f2f121 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 424 593 3.2E-39 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS16120 4fad81ac4501dfaddf95c0e122f2f121 627 Gene3D G3DSA:1.10.287.950 412 627 1.0E-48 T 28-03-2018 AL549_RS16120 4fad81ac4501dfaddf95c0e122f2f121 627 Gene3D G3DSA:1.10.287.950 326 411 4.5E-9 T 28-03-2018 AL549_RS16120 4fad81ac4501dfaddf95c0e122f2f121 627 SMART SM00283 365 626 1.8E-63 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS16120 4fad81ac4501dfaddf95c0e122f2f121 627 Pfam PF02743 Cache domain 43 258 2.6E-28 T 28-03-2018 IPR033479 Double Cache domain 1 AL549_RS16120 4fad81ac4501dfaddf95c0e122f2f121 627 SUPERFAMILY SSF103190 89 175 1.99E-11 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AL549_RS16120 4fad81ac4501dfaddf95c0e122f2f121 627 Pfam PF00672 HAMP domain 300 346 3.1E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS16120 4fad81ac4501dfaddf95c0e122f2f121 627 Gene3D G3DSA:3.30.450.20 60 154 1.6E-22 T 28-03-2018 AL549_RS16120 4fad81ac4501dfaddf95c0e122f2f121 627 Gene3D G3DSA:3.30.450.20 155 274 3.9E-22 T 28-03-2018 AL549_RS01015 6d685fa8ba186ed611c63fee4fcf3968 301 SUPERFAMILY SSF103481 51 148 1.23E-9 T 28-03-2018 AL549_RS01015 6d685fa8ba186ed611c63fee4fcf3968 301 SUPERFAMILY SSF103481 204 299 1.31E-17 T 28-03-2018 AL549_RS01015 6d685fa8ba186ed611c63fee4fcf3968 301 Pfam PF00892 EamA-like transporter family 158 298 3.9E-18 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS01015 6d685fa8ba186ed611c63fee4fcf3968 301 Pfam PF00892 EamA-like transporter family 20 147 1.2E-13 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS17230 e0ae9f3a0558879c85135ca4c9d5dffe 87 Pfam PF08891 YfcL protein 4 84 5.5E-32 T 28-03-2018 IPR014987 Uncharacterised protein family YfcL AL549_RS12140 8e8641e176b00c428e220dbfe0060f79 458 Pfam PF01235 Sodium:alanine symporter family 54 448 3.4E-138 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS12140 8e8641e176b00c428e220dbfe0060f79 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS12140 8e8641e176b00c428e220dbfe0060f79 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 4.3E-52 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS12140 8e8641e176b00c428e220dbfe0060f79 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 4.3E-52 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS12140 8e8641e176b00c428e220dbfe0060f79 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 4.3E-52 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS12140 8e8641e176b00c428e220dbfe0060f79 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 4.3E-52 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS12140 8e8641e176b00c428e220dbfe0060f79 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 4.3E-52 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS12140 8e8641e176b00c428e220dbfe0060f79 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 4.3E-52 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS12140 8e8641e176b00c428e220dbfe0060f79 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 441 7.4E-152 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS17520 a6211bb39447c2041f940dc1542880cf 142 Gene3D G3DSA:3.30.160.170 34 139 1.2E-21 T 28-03-2018 IPR005186 FlaG protein AL549_RS17520 a6211bb39447c2041f940dc1542880cf 142 SUPERFAMILY SSF160214 44 141 8.5E-23 T 28-03-2018 IPR005186 FlaG protein AL549_RS17520 a6211bb39447c2041f940dc1542880cf 142 Pfam PF03646 FlaG protein 40 141 1.4E-24 T 28-03-2018 IPR005186 FlaG protein AL549_RS09625 a7f287a7febb615ac79e8f6fd368804c 323 Gene3D G3DSA:1.10.530.10 198 323 1.1E-33 T 28-03-2018 AL549_RS09625 a7f287a7febb615ac79e8f6fd368804c 323 SUPERFAMILY SSF53955 12 322 5.48E-100 T 28-03-2018 IPR023346 Lysozyme-like domain AL549_RS09625 a7f287a7febb615ac79e8f6fd368804c 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 23 322 2.1E-113 T 28-03-2018 IPR011970 Lytic murein transglycosylase AL549_RS09625 a7f287a7febb615ac79e8f6fd368804c 323 Gene3D G3DSA:1.10.8.350 87 192 2.5E-37 T 28-03-2018 AL549_RS09625 a7f287a7febb615ac79e8f6fd368804c 323 Pfam PF13406 Transglycosylase SLT domain 23 319 2.2E-110 T 28-03-2018 IPR031304 Transglycosylase SLT domain 2 AL549_RS22535 65394225286a675071f72cf428311744 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 6.0E-14 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL549_RS22535 65394225286a675071f72cf428311744 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 6.0E-14 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL549_RS22535 65394225286a675071f72cf428311744 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 6.0E-14 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL549_RS22535 65394225286a675071f72cf428311744 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 217 241 6.0E-14 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL549_RS22535 65394225286a675071f72cf428311744 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 185 206 6.0E-14 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL549_RS22535 65394225286a675071f72cf428311744 275 Gene3D G3DSA:3.40.190.80 164 272 2.3E-28 T 28-03-2018 AL549_RS22535 65394225286a675071f72cf428311744 275 SUPERFAMILY SSF56655 6 272 1.1E-77 T 28-03-2018 AL549_RS22535 65394225286a675071f72cf428311744 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 2.4E-105 T 28-03-2018 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 AL549_RS22535 65394225286a675071f72cf428311744 275 Pfam PF00459 Inositol monophosphatase family 8 252 4.4E-52 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL549_RS22535 65394225286a675071f72cf428311744 275 Gene3D G3DSA:3.30.540.10 4 163 6.3E-43 T 28-03-2018 AL549_RS15735 7426597eb7b6fde604826ac7495c1c4b 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 1.3E-53 T 28-03-2018 IPR021212 Domain of unknown function DUF2760 AL549_RS02245 d177efa48774686dad8fdc826d726f99 573 PIRSF PIRSF014753 1 573 5.0E-179 T 28-03-2018 IPR016624 Uncharacterised conserved protein UCP014753 AL549_RS02245 d177efa48774686dad8fdc826d726f99 573 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 18 356 6.3E-96 T 28-03-2018 IPR016624 Uncharacterised conserved protein UCP014753 AL549_RS16355 9f7bd5a45000bb94ddc4a20420384605 123 Pfam PF13453 Transcription factor zinc-finger 2 39 1.3E-10 T 28-03-2018 IPR027392 Transcription factor zinc-finger AL549_RS16355 9f7bd5a45000bb94ddc4a20420384605 123 Gene3D G3DSA:2.10.230.10 1 97 7.7E-4 T 28-03-2018 AL549_RS05450 1621846455cd13b97e4e6b324ae45dce 188 Pfam PF01618 MotA/TolQ/ExbB proton channel family 68 181 4.8E-22 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL549_RS20815 b303b45724b63bbfd8a7be4b6510d474 396 Gene3D G3DSA:1.20.1250.20 1 193 1.1E-12 T 28-03-2018 AL549_RS20815 b303b45724b63bbfd8a7be4b6510d474 396 Gene3D G3DSA:1.20.1250.20 194 375 2.7E-9 T 28-03-2018 AL549_RS20815 b303b45724b63bbfd8a7be4b6510d474 396 SUPERFAMILY SSF103473 8 373 2.62E-35 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS20815 b303b45724b63bbfd8a7be4b6510d474 396 Pfam PF12832 MFS_1 like family 13 361 9.0E-41 T 28-03-2018 IPR024989 Major facilitator superfamily associated domain AL549_RS20815 b303b45724b63bbfd8a7be4b6510d474 396 PIRSF PIRSF004925 2 389 6.9E-104 T 28-03-2018 IPR026032 Probable 3-phenylpropionic acid transporter AL549_RS05210 99ccc31b497fb25330b191589116b9dc 196 SUPERFAMILY SSF140478 25 181 3.66E-53 T 28-03-2018 IPR023353 LemA-like domain AL549_RS05210 99ccc31b497fb25330b191589116b9dc 196 Pfam PF04011 LemA family 6 196 1.8E-65 T 28-03-2018 IPR007156 LemA AL549_RS05210 99ccc31b497fb25330b191589116b9dc 196 Gene3D G3DSA:1.20.1440.20 13 196 1.5E-60 T 28-03-2018 AL549_RS04260 6d2e40d3c7637b972d78cb5ca4c51914 180 Pfam PF13302 Acetyltransferase (GNAT) domain 21 160 6.0E-25 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS04260 6d2e40d3c7637b972d78cb5ca4c51914 180 Gene3D G3DSA:3.40.630.30 4 178 6.6E-21 T 28-03-2018 AL549_RS04260 6d2e40d3c7637b972d78cb5ca4c51914 180 SUPERFAMILY SSF55729 13 167 3.67E-34 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS00390 3d7d108f4b22f5ce0723a42df85e5525 257 Gene3D G3DSA:3.10.200.10 33 257 2.4E-65 T 28-03-2018 IPR001148 Alpha carbonic anhydrase AL549_RS00390 3d7d108f4b22f5ce0723a42df85e5525 257 SMART SM01057 41 256 8.0E-90 T 28-03-2018 IPR001148 Alpha carbonic anhydrase AL549_RS00390 3d7d108f4b22f5ce0723a42df85e5525 257 Pfam PF00194 Eukaryotic-type carbonic anhydrase 40 255 3.6E-50 T 28-03-2018 IPR001148 Alpha carbonic anhydrase AL549_RS00390 3d7d108f4b22f5ce0723a42df85e5525 257 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 127 143 - T 28-03-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0006730|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 AL549_RS00390 3d7d108f4b22f5ce0723a42df85e5525 257 SUPERFAMILY SSF51069 40 254 1.31E-72 T 28-03-2018 IPR001148 Alpha carbonic anhydrase AL549_RS11560 62bfbde5213a394a37841b6b97bb1a8b 306 SUPERFAMILY SSF109604 25 301 1.0E-43 T 28-03-2018 AL549_RS11560 62bfbde5213a394a37841b6b97bb1a8b 306 Pfam PF08668 HDOD domain 39 235 3.0E-38 T 28-03-2018 IPR013976 Metal-dependent hydrolase HDOD AL549_RS11560 62bfbde5213a394a37841b6b97bb1a8b 306 Gene3D G3DSA:1.10.3210.10 12 303 4.2E-30 T 28-03-2018 AL549_RS22785 72bf65c2952005b51c995d5b60316814 129 Pfam PF01219 Prokaryotic diacylglycerol kinase 22 122 6.1E-35 T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL549_RS22785 72bf65c2952005b51c995d5b60316814 129 Gene3D G3DSA:1.10.3830.10 13 125 3.6E-41 T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL549_RS22785 72bf65c2952005b51c995d5b60316814 129 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 76 87 - T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL549_RS20940 e8a853986f05d084f76ffab258bec287 164 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 154 2.4E-54 T 28-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AL549_RS20940 e8a853986f05d084f76ffab258bec287 164 PIRSF PIRSF016548 3 164 6.4E-72 T 28-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AL549_RS21135 326eb4879f53976aa93c03bb3fdda5ea 207 Gene3D G3DSA:1.10.10.10 1 70 2.5E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21135 326eb4879f53976aa93c03bb3fdda5ea 207 Gene3D G3DSA:2.10.109.10 85 204 6.8E-26 T 28-03-2018 AL549_RS21135 326eb4879f53976aa93c03bb3fdda5ea 207 SUPERFAMILY SSF46785 3 69 3.09E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21135 326eb4879f53976aa93c03bb3fdda5ea 207 TIGRFAM TIGR00498 lexA: repressor LexA 1 204 6.3E-81 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AL549_RS21135 326eb4879f53976aa93c03bb3fdda5ea 207 SUPERFAMILY SSF51306 81 203 1.92E-36 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL549_RS21135 326eb4879f53976aa93c03bb3fdda5ea 207 Hamap MF_00015 LexA repressor [lexA]. 3 204 32.01 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AL549_RS21135 326eb4879f53976aa93c03bb3fdda5ea 207 Pfam PF00717 Peptidase S24-like 119 184 2.3E-15 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL549_RS21135 326eb4879f53976aa93c03bb3fdda5ea 207 Pfam PF01726 LexA DNA binding domain 1 65 8.3E-29 T 28-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AL549_RS21135 326eb4879f53976aa93c03bb3fdda5ea 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 116 126 7.0E-13 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AL549_RS21135 326eb4879f53976aa93c03bb3fdda5ea 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 127 138 7.0E-13 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AL549_RS21135 326eb4879f53976aa93c03bb3fdda5ea 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 155 167 7.0E-13 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AL549_RS03525 ad7088be3108274f0a29ea6fb4ca7a7d 191 Gene3D G3DSA:2.60.40.420 80 191 3.2E-14 T 28-03-2018 IPR008972 Cupredoxin AL549_RS03525 ad7088be3108274f0a29ea6fb4ca7a7d 191 SUPERFAMILY SSF49503 82 189 8.09E-23 T 28-03-2018 IPR008972 Cupredoxin AL549_RS15885 8acd276b68370ac941c880a939796c66 401 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 28-03-2018 IPR013061 Tryptophan/tryrosine permease, conserved site AL549_RS15885 8acd276b68370ac941c880a939796c66 401 PRINTS PR00166 Aromatic amino acid permease signature 183 205 3.6E-79 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS15885 8acd276b68370ac941c880a939796c66 401 PRINTS PR00166 Aromatic amino acid permease signature 38 57 3.6E-79 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS15885 8acd276b68370ac941c880a939796c66 401 PRINTS PR00166 Aromatic amino acid permease signature 222 241 3.6E-79 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS15885 8acd276b68370ac941c880a939796c66 401 PRINTS PR00166 Aromatic amino acid permease signature 279 298 3.6E-79 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS15885 8acd276b68370ac941c880a939796c66 401 PRINTS PR00166 Aromatic amino acid permease signature 313 331 3.6E-79 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS15885 8acd276b68370ac941c880a939796c66 401 PRINTS PR00166 Aromatic amino acid permease signature 11 34 3.6E-79 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS15885 8acd276b68370ac941c880a939796c66 401 PRINTS PR00166 Aromatic amino acid permease signature 83 103 3.6E-79 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS15885 8acd276b68370ac941c880a939796c66 401 PRINTS PR00166 Aromatic amino acid permease signature 334 353 3.6E-79 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS15885 8acd276b68370ac941c880a939796c66 401 PRINTS PR00166 Aromatic amino acid permease signature 149 169 3.6E-79 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS15885 8acd276b68370ac941c880a939796c66 401 Pfam PF03222 Tryptophan/tyrosine permease family 4 387 1.8E-111 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AL549_RS15885 8acd276b68370ac941c880a939796c66 401 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 377 2.0E-113 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS11485 1eed4cd959115e5deef00b0d3b071881 502 Gene3D G3DSA:3.40.50.720 20 323 8.9E-26 T 28-03-2018 AL549_RS11485 1eed4cd959115e5deef00b0d3b071881 502 SUPERFAMILY SSF51735 21 314 1.23E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS11485 1eed4cd959115e5deef00b0d3b071881 502 Pfam PF11066 Protein of unknown function (DUF2867) 352 485 1.5E-12 T 28-03-2018 IPR021295 Protein of unknown function DUF2867 AL549_RS11485 1eed4cd959115e5deef00b0d3b071881 502 Pfam PF13460 NAD(P)H-binding 28 137 1.5E-11 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS04110 806cc19c9399ffa2f1e12b7c605cebac 278 Gene3D G3DSA:3.40.50.10490 91 276 1.8E-28 T 28-03-2018 AL549_RS04110 806cc19c9399ffa2f1e12b7c605cebac 278 SUPERFAMILY SSF53697 100 268 7.72E-31 T 28-03-2018 AL549_RS04110 806cc19c9399ffa2f1e12b7c605cebac 278 Gene3D G3DSA:1.10.10.10 1 81 1.4E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS04110 806cc19c9399ffa2f1e12b7c605cebac 278 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 80 1.2E-19 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL549_RS04110 806cc19c9399ffa2f1e12b7c605cebac 278 Pfam PF01380 SIS domain 129 251 1.4E-15 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL549_RS04110 806cc19c9399ffa2f1e12b7c605cebac 278 SUPERFAMILY SSF46689 5 80 8.96E-22 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS02945 e81ed24923251c170ccc10582fea521f 144 Pfam PF13279 Thioesterase-like superfamily 16 136 2.9E-21 T 28-03-2018 AL549_RS02945 e81ed24923251c170ccc10582fea521f 144 SUPERFAMILY SSF54637 8 137 4.88E-34 T 28-03-2018 IPR029069 HotDog domain AL549_RS02945 e81ed24923251c170ccc10582fea521f 144 Gene3D G3DSA:3.10.129.10 5 144 6.4E-37 T 28-03-2018 AL549_RS13450 b812b2aae4104c530126237493746884 33 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 3.8E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS12225 b46f22ee05e35bf72a6714b08b89663c 67 Pfam PF06945 Protein of unknown function (DUF1289) 8 53 9.1E-17 T 28-03-2018 IPR010710 Protein of unknown function DUF1289 AL549_RS09725 77d754cbac0f41ef2f89faf4fd803748 84 SUPERFAMILY SSF47336 4 82 1.7E-19 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL549_RS09725 77d754cbac0f41ef2f89faf4fd803748 84 Hamap MF_01217 Acyl carrier protein [acpP]. 8 82 14.069 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AL549_RS09725 77d754cbac0f41ef2f89faf4fd803748 84 Gene3D G3DSA:1.10.1200.10 1 84 7.2E-19 T 28-03-2018 AL549_RS09725 77d754cbac0f41ef2f89faf4fd803748 84 Pfam PF00550 Phosphopantetheine attachment site 11 78 2.9E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL549_RS21110 4222d46517635590780ac4b75e41507d 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 368 2.4E-196 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AL549_RS21110 4222d46517635590780ac4b75e41507d 369 SUPERFAMILY SSF53335 10 367 3.52E-55 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS21110 4222d46517635590780ac4b75e41507d 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site AL549_RS21110 4222d46517635590780ac4b75e41507d 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 44.997 T 28-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AL549_RS21110 4222d46517635590780ac4b75e41507d 369 Gene3D G3DSA:3.40.50.150 164 368 5.6E-34 T 28-03-2018 AL549_RS21110 4222d46517635590780ac4b75e41507d 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 28-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site AL549_RS21110 4222d46517635590780ac4b75e41507d 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 368 2.2E-192 T 28-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AL549_RS08530 a4931a4da063897ab52832a5c28f247a 281 SUPERFAMILY SSF53474 3 279 5.49E-93 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS08530 a4931a4da063897ab52832a5c28f247a 281 Gene3D G3DSA:3.40.50.1820 1 280 6.7E-47 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS08530 a4931a4da063897ab52832a5c28f247a 281 Pfam PF00756 Putative esterase 23 273 3.2E-62 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AL549_RS08530 a4931a4da063897ab52832a5c28f247a 281 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 278 5.6E-120 T 28-03-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 AL549_RS06325 943c2cae02b7a6cb8b18f13ea7a49b45 1162 SMART SM00635 508 589 1.2E-8 T 28-03-2018 IPR003343 Bacterial Ig-like, group 2 AL549_RS06325 943c2cae02b7a6cb8b18f13ea7a49b45 1162 Gene3D G3DSA:2.60.40.1080 335 418 2.2E-4 T 28-03-2018 AL549_RS06325 943c2cae02b7a6cb8b18f13ea7a49b45 1162 Gene3D G3DSA:2.60.40.1080 422 506 9.9E-9 T 28-03-2018 AL549_RS06325 943c2cae02b7a6cb8b18f13ea7a49b45 1162 Gene3D G3DSA:2.60.40.1080 507 592 2.1E-15 T 28-03-2018 AL549_RS06325 943c2cae02b7a6cb8b18f13ea7a49b45 1162 SUPERFAMILY SSF49373 457 505 1.41E-5 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AL549_RS06325 943c2cae02b7a6cb8b18f13ea7a49b45 1162 SUPERFAMILY SSF49373 509 591 1.57E-6 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AL549_RS23245 67c4a14e77f8364ca998ce135a94cfbc 164 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 44 160 2.0E-23 T 28-03-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE AL549_RS21355 fab8fec2239d5e3d62ae2217eea148a0 405 Gene3D G3DSA:3.90.20.10 188 386 0.025 T 28-03-2018 AL549_RS21355 fab8fec2239d5e3d62ae2217eea148a0 405 Gene3D G3DSA:3.90.20.10 81 162 0.25 T 28-03-2018 AL549_RS21355 fab8fec2239d5e3d62ae2217eea148a0 405 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 64 392 1.0E-101 T 28-03-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX AL549_RS17105 87af584844fbfada2b104c242f9f2a14 82 Pfam PF03692 Putative zinc- or iron-chelating domain 3 59 9.5E-6 T 28-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AL549_RS10210 608892b03e04bedaf0936def6fbaf6b2 891 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 850 5.2E-113 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL549_RS10210 608892b03e04bedaf0936def6fbaf6b2 891 Gene3D G3DSA:3.40.605.10 1 226 3.1E-32 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL549_RS10210 608892b03e04bedaf0936def6fbaf6b2 891 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL549_RS10210 608892b03e04bedaf0936def6fbaf6b2 891 SUPERFAMILY SSF56796 452 863 7.33E-115 T 28-03-2018 AL549_RS10210 608892b03e04bedaf0936def6fbaf6b2 891 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL549_RS10210 608892b03e04bedaf0936def6fbaf6b2 891 Pfam PF00171 Aldehyde dehydrogenase family 4 402 1.8E-25 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL549_RS10210 608892b03e04bedaf0936def6fbaf6b2 891 SUPERFAMILY SSF53720 5 454 1.01E-84 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL549_RS10210 608892b03e04bedaf0936def6fbaf6b2 891 Gene3D G3DSA:1.20.1090.10 643 867 3.5E-58 T 28-03-2018 AL549_RS10210 608892b03e04bedaf0936def6fbaf6b2 891 Gene3D G3DSA:3.40.309.10 227 405 2.1E-25 T 28-03-2018 AL549_RS10210 608892b03e04bedaf0936def6fbaf6b2 891 PIRSF PIRSF000111 1 865 0.0 T 28-03-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 AL549_RS10210 608892b03e04bedaf0936def6fbaf6b2 891 Gene3D G3DSA:3.40.50.1970 431 642 2.6E-50 T 28-03-2018 AL549_RS08420 29f49634f077e0a22ec351263fa774e4 456 Pfam PF07804 HipA-like C-terminal domain 169 388 2.3E-22 T 28-03-2018 IPR012893 HipA-like, C-terminal AL549_RS08420 29f49634f077e0a22ec351263fa774e4 456 PIRSF PIRSF028135 4 456 8.0E-234 T 28-03-2018 IPR016869 Uncharacterised conserved protein UCP028135, HipA-like AL549_RS03415 c5012704e0611a78d46a2b7f87b0ded2 272 PIRSF PIRSF016184 7 272 1.9E-51 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL549_RS03415 c5012704e0611a78d46a2b7f87b0ded2 272 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 9 231 3.4E-38 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL549_RS03415 c5012704e0611a78d46a2b7f87b0ded2 272 SUPERFAMILY SSF54506 8 272 4.94E-67 T 28-03-2018 AL549_RS03415 c5012704e0611a78d46a2b7f87b0ded2 272 Pfam PF02567 Phenazine biosynthesis-like protein 14 268 1.2E-62 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL549_RS03415 c5012704e0611a78d46a2b7f87b0ded2 272 Gene3D G3DSA:3.10.310.10 5 132 2.4E-31 T 28-03-2018 AL549_RS03415 c5012704e0611a78d46a2b7f87b0ded2 272 Gene3D G3DSA:3.10.310.10 133 260 2.2E-31 T 28-03-2018 AL549_RS18525 4d4a8c32e571346f494ee2ef526db182 302 Pfam PF13176 Tetratricopeptide repeat 240 263 0.029 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS18525 4d4a8c32e571346f494ee2ef526db182 302 SMART SM00028 66 99 0.057 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS18525 4d4a8c32e571346f494ee2ef526db182 302 SMART SM00028 100 133 0.0011 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS18525 4d4a8c32e571346f494ee2ef526db182 302 SMART SM00028 237 270 20.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS18525 4d4a8c32e571346f494ee2ef526db182 302 PIRSF PIRSF004654 1 295 6.9E-88 T 28-03-2018 IPR023605 Lipoprotein NlpI AL549_RS18525 4d4a8c32e571346f494ee2ef526db182 302 SUPERFAMILY SSF48452 34 286 7.83E-69 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS18525 4d4a8c32e571346f494ee2ef526db182 302 Gene3D G3DSA:1.25.40.10 30 297 5.3E-38 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS21170 541be2db4267c9460ffbce1ebb2c2750 280 Gene3D G3DSA:1.20.1540.10 94 271 1.0E-33 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AL549_RS21170 541be2db4267c9460ffbce1ebb2c2750 280 SUPERFAMILY SSF144091 96 275 4.71E-41 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AL549_RS21170 541be2db4267c9460ffbce1ebb2c2750 280 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 4.3E-34 T 28-03-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 AL549_RS21170 541be2db4267c9460ffbce1ebb2c2750 280 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 272 5.5E-115 T 28-03-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 AL549_RS21170 541be2db4267c9460ffbce1ebb2c2750 280 Pfam PF01694 Rhomboid family 133 271 4.7E-30 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AL549_RS18080 4b539967256ed3c2fb8550b160566bc8 297 Gene3D G3DSA:3.40.50.720 3 167 3.1E-23 T 28-03-2018 AL549_RS18080 4b539967256ed3c2fb8550b160566bc8 297 SUPERFAMILY SSF51735 3 166 1.73E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS18080 4b539967256ed3c2fb8550b160566bc8 297 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 291 1.9E-36 T 28-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AL549_RS18080 4b539967256ed3c2fb8550b160566bc8 297 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 142 2.5E-32 T 28-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AL549_RS18080 4b539967256ed3c2fb8550b160566bc8 297 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 293 1.2E-83 T 28-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AL549_RS18080 4b539967256ed3c2fb8550b160566bc8 297 Gene3D G3DSA:1.10.1040.10 168 292 4.6E-37 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL549_RS18080 4b539967256ed3c2fb8550b160566bc8 297 SUPERFAMILY SSF48179 168 291 8.84E-36 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL549_RS05505 8d10609ddc2931d5205282b2d968849b 144 PIRSF PIRSF000077 38 142 1.9E-32 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL549_RS05505 8d10609ddc2931d5205282b2d968849b 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 141 3.6E-35 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL549_RS05505 8d10609ddc2931d5205282b2d968849b 144 PRINTS PR00421 Thioredoxin family signature 58 66 2.4E-7 T 28-03-2018 AL549_RS05505 8d10609ddc2931d5205282b2d968849b 144 PRINTS PR00421 Thioredoxin family signature 106 117 2.4E-7 T 28-03-2018 AL549_RS05505 8d10609ddc2931d5205282b2d968849b 144 PRINTS PR00421 Thioredoxin family signature 66 75 2.4E-7 T 28-03-2018 AL549_RS05505 8d10609ddc2931d5205282b2d968849b 144 Gene3D G3DSA:3.40.30.10 41 144 1.1E-35 T 28-03-2018 AL549_RS05505 8d10609ddc2931d5205282b2d968849b 144 Pfam PF00085 Thioredoxin 43 140 1.5E-27 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 AL549_RS05505 8d10609ddc2931d5205282b2d968849b 144 SUPERFAMILY SSF52833 29 142 2.93E-37 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS22135 c0f7dc7d8187f43f38e62295208eabb4 291 SUPERFAMILY SSF51658 29 255 7.54E-7 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL549_RS22135 c0f7dc7d8187f43f38e62295208eabb4 291 Gene3D G3DSA:3.20.20.150 6 284 9.9E-78 T 28-03-2018 AL549_RS22135 c0f7dc7d8187f43f38e62295208eabb4 291 Hamap MF_00697 UPF0276 protein . 10 282 45.598 T 28-03-2018 IPR007801 Uncharacterised protein family UPF0276 AL549_RS22135 c0f7dc7d8187f43f38e62295208eabb4 291 Pfam PF05114 Protein of unknown function (DUF692) 10 274 4.4E-107 T 28-03-2018 IPR007801 Uncharacterised protein family UPF0276 AL549_RS03990 4b5a18a3eb2c1f957fca02fafae30d22 366 SUPERFAMILY SSF53822 27 364 7.46E-83 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS03990 4b5a18a3eb2c1f957fca02fafae30d22 366 Pfam PF13407 Periplasmic binding protein domain 69 321 1.1E-12 T 28-03-2018 IPR025997 Periplasmic binding protein AL549_RS03990 4b5a18a3eb2c1f957fca02fafae30d22 366 Gene3D G3DSA:3.40.50.2300 210 341 1.2E-18 T 28-03-2018 AL549_RS03990 4b5a18a3eb2c1f957fca02fafae30d22 366 Gene3D G3DSA:3.40.50.2300 24 209 2.1E-23 T 28-03-2018 AL549_RS02290 fe91ce78e2b24a360b066e60d463b9f5 541 Pfam PF00916 Sulfate permease family 27 395 8.1E-91 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AL549_RS02290 fe91ce78e2b24a360b066e60d463b9f5 541 SUPERFAMILY SSF52091 436 509 1.94E-9 T 28-03-2018 IPR002645 STAS domain AL549_RS02290 fe91ce78e2b24a360b066e60d463b9f5 541 Gene3D G3DSA:3.30.750.24 432 528 3.3E-9 T 28-03-2018 IPR002645 STAS domain AL549_RS02980 f349aad9ab33d8e028476ca0cce6a27d 385 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 7 368 9.6E-62 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AL549_RS02980 f349aad9ab33d8e028476ca0cce6a27d 385 Gene3D G3DSA:1.20.1250.20 195 375 8.6E-7 T 28-03-2018 AL549_RS02980 f349aad9ab33d8e028476ca0cce6a27d 385 Pfam PF07690 Major Facilitator Superfamily 18 343 3.6E-38 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS02980 f349aad9ab33d8e028476ca0cce6a27d 385 SUPERFAMILY SSF103473 4 370 9.68E-48 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS02980 f349aad9ab33d8e028476ca0cce6a27d 385 Gene3D G3DSA:1.20.1250.20 2 191 2.7E-28 T 28-03-2018 AL549_RS03175 4b3f8e9089c95f14f5b49e6248e3a61e 131 Pfam PF10000 ACT domain 2 69 3.5E-27 T 28-03-2018 IPR018717 Domain of unknown function DUF2241 AL549_RS03175 4b3f8e9089c95f14f5b49e6248e3a61e 131 SUPERFAMILY SSF55021 69 129 3.43E-20 T 28-03-2018 AL549_RS03175 4b3f8e9089c95f14f5b49e6248e3a61e 131 Gene3D G3DSA:3.30.2130.10 1 131 2.3E-30 T 28-03-2018 AL549_RS03175 4b3f8e9089c95f14f5b49e6248e3a61e 131 SUPERFAMILY SSF55021 2 65 1.01E-19 T 28-03-2018 AL549_RS03175 4b3f8e9089c95f14f5b49e6248e3a61e 131 Pfam PF13840 ACT domain 72 127 3.5E-11 T 28-03-2018 IPR027795 GATS-like ACT domain AL549_RS04580 30194c3947e19ea1533c38b847e2e8fb 264 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 248 8.6E-132 T 28-03-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 AL549_RS04580 30194c3947e19ea1533c38b847e2e8fb 264 Gene3D G3DSA:3.40.50.720 1 250 6.9E-77 T 28-03-2018 AL549_RS04580 30194c3947e19ea1533c38b847e2e8fb 264 Pfam PF00899 ThiF family 12 245 1.1E-63 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL549_RS04580 30194c3947e19ea1533c38b847e2e8fb 264 SUPERFAMILY SSF69572 4 249 1.31E-85 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL549_RS22660 aa24de8c993bbfd157a35d0329ae2f71 608 Gene3D G3DSA:3.90.76.10 56 208 8.5E-26 T 28-03-2018 AL549_RS22660 aa24de8c993bbfd157a35d0329ae2f71 608 Gene3D G3DSA:3.10.105.10 327 539 2.0E-35 T 28-03-2018 AL549_RS22660 aa24de8c993bbfd157a35d0329ae2f71 608 Gene3D G3DSA:3.40.190.10 212 326 8.6E-8 T 28-03-2018 AL549_RS22660 aa24de8c993bbfd157a35d0329ae2f71 608 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 484 1.7E-57 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL549_RS22660 aa24de8c993bbfd157a35d0329ae2f71 608 PIRSF PIRSF002741 2 564 8.1E-64 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL549_RS22660 aa24de8c993bbfd157a35d0329ae2f71 608 SUPERFAMILY SSF53850 41 557 6.98E-92 T 28-03-2018 AL549_RS13965 7713f9a030e0f48f15c20bad2b994b35 47 Pfam PF11665 Protein of unknown function (DUF3265) 20 47 4.9E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS08685 2bf57890716c4333cb4eed1b2891958a 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 3.1E-70 T 28-03-2018 IPR020536 Thil, AANH domain GO:0004810 AL549_RS08685 2bf57890716c4333cb4eed1b2891958a 482 SUPERFAMILY SSF143437 1 173 9.77E-47 T 28-03-2018 AL549_RS08685 2bf57890716c4333cb4eed1b2891958a 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 220.193 T 28-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 AL549_RS08685 2bf57890716c4333cb4eed1b2891958a 482 SMART SM00981 75 165 1.9E-23 T 28-03-2018 IPR004114 THUMP domain GO:0003723 AL549_RS08685 2bf57890716c4333cb4eed1b2891958a 482 Gene3D G3DSA:3.30.2300.10 84 160 1.3E-21 T 28-03-2018 AL549_RS08685 2bf57890716c4333cb4eed1b2891958a 482 Pfam PF02926 THUMP domain 59 158 1.6E-22 T 28-03-2018 IPR004114 THUMP domain GO:0003723 AL549_RS08685 2bf57890716c4333cb4eed1b2891958a 482 SUPERFAMILY SSF52402 174 372 1.01E-40 T 28-03-2018 AL549_RS08685 2bf57890716c4333cb4eed1b2891958a 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 2.6E-42 T 28-03-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 AL549_RS08685 2bf57890716c4333cb4eed1b2891958a 482 Gene3D G3DSA:3.40.250.10 402 481 5.1E-13 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS08685 2bf57890716c4333cb4eed1b2891958a 482 Gene3D G3DSA:3.30.70.1510 2 82 7.0E-18 T 28-03-2018 AL549_RS08685 2bf57890716c4333cb4eed1b2891958a 482 Gene3D G3DSA:3.40.50.620 175 401 2.1E-25 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS08685 2bf57890716c4333cb4eed1b2891958a 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 1.6E-110 T 28-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 AL549_RS08685 2bf57890716c4333cb4eed1b2891958a 482 SUPERFAMILY SSF52821 401 481 2.49E-12 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS18720 09481cf2e156a283db363e56db43498c 573 Gene3D G3DSA:1.50.10.10 96 567 1.1E-66 T 28-03-2018 AL549_RS18720 09481cf2e156a283db363e56db43498c 573 Pfam PF02927 Cellulase N-terminal ig-like domain 5 83 7.1E-9 T 28-03-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 AL549_RS18720 09481cf2e156a283db363e56db43498c 573 SUPERFAMILY SSF48208 78 566 3.4E-95 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL549_RS18720 09481cf2e156a283db363e56db43498c 573 Gene3D G3DSA:2.60.40.10 2 92 3.7E-20 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS18720 09481cf2e156a283db363e56db43498c 573 Pfam PF00759 Glycosyl hydrolase family 9 100 500 1.1E-23 T 28-03-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AL549_RS18720 09481cf2e156a283db363e56db43498c 573 SUPERFAMILY SSF81296 2 90 4.13E-14 T 28-03-2018 IPR014756 Immunoglobulin E-set AL549_RS11825 0c65795414da70ff26a1dd89abfb2616 221 PIRSF PIRSF028063 1 221 5.8E-144 T 28-03-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger AL549_RS11825 0c65795414da70ff26a1dd89abfb2616 221 Gene3D G3DSA:3.30.65.10 163 216 1.5E-10 T 28-03-2018 AL549_RS11825 0c65795414da70ff26a1dd89abfb2616 221 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 1.5E-37 T 28-03-2018 IPR024402 Domain of unknown function DUF2726 AL549_RS09595 2a52b9da0b3af20c8571cff6cce7b201 565 Gene3D G3DSA:3.40.50.980 217 370 1.6E-38 T 28-03-2018 AL549_RS09595 2a52b9da0b3af20c8571cff6cce7b201 565 SUPERFAMILY SSF56801 14 553 2.22E-149 T 28-03-2018 AL549_RS09595 2a52b9da0b3af20c8571cff6cce7b201 565 Pfam PF00501 AMP-binding enzyme 29 461 1.3E-106 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL549_RS09595 2a52b9da0b3af20c8571cff6cce7b201 565 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 1.1E-17 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL549_RS09595 2a52b9da0b3af20c8571cff6cce7b201 565 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL549_RS09595 2a52b9da0b3af20c8571cff6cce7b201 565 Gene3D G3DSA:3.30.300.30 455 560 4.8E-25 T 28-03-2018 AL549_RS09595 2a52b9da0b3af20c8571cff6cce7b201 565 Gene3D G3DSA:3.40.50.980 20 216 1.9E-41 T 28-03-2018 AL549_RS09595 2a52b9da0b3af20c8571cff6cce7b201 565 Gene3D G3DSA:2.30.38.10 371 454 3.6E-29 T 28-03-2018 AL549_RS04800 e1b3d1e9bf755f2f668fa2cec1cab621 269 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 261 3.1E-49 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL549_RS04800 e1b3d1e9bf755f2f668fa2cec1cab621 269 SUPERFAMILY SSF52096 7 261 4.54E-70 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS04800 e1b3d1e9bf755f2f668fa2cec1cab621 269 Gene3D G3DSA:3.90.226.10 3 268 1.4E-65 T 28-03-2018 AL549_RS10610 1fff55bcf3a0c3d4d89beb307a1623b8 318 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 6 318 2.4E-149 T 28-03-2018 IPR017566 NrfD AL549_RS10610 1fff55bcf3a0c3d4d89beb307a1623b8 318 Pfam PF03916 Polysulphide reductase, NrfD 6 317 3.9E-75 T 28-03-2018 IPR005614 NrfD family AL549_RS10610 1fff55bcf3a0c3d4d89beb307a1623b8 318 Gene3D G3DSA:1.20.1630.10 6 318 1.8E-51 T 28-03-2018 AL549_RS12860 404bc8fb8373908e34ca7d38c1bdd36f 157 Pfam PF13673 Acetyltransferase (GNAT) domain 46 132 1.9E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS12860 404bc8fb8373908e34ca7d38c1bdd36f 157 Gene3D G3DSA:3.40.630.30 5 156 3.6E-14 T 28-03-2018 AL549_RS12860 404bc8fb8373908e34ca7d38c1bdd36f 157 SUPERFAMILY SSF55729 21 137 4.12E-14 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS18835 c5ba7ea63f83d27aa50d7c8507693898 264 Gene3D G3DSA:3.20.20.60 1 263 2.9E-81 T 28-03-2018 AL549_RS18835 c5ba7ea63f83d27aa50d7c8507693898 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 2.2E-107 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL549_RS18835 c5ba7ea63f83d27aa50d7c8507693898 264 PIRSF PIRSF000388 1 264 2.5E-100 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL549_RS18835 c5ba7ea63f83d27aa50d7c8507693898 264 SUPERFAMILY SSF51621 3 262 1.02E-104 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL549_RS18835 c5ba7ea63f83d27aa50d7c8507693898 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 1.1E-113 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL549_RS18835 c5ba7ea63f83d27aa50d7c8507693898 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.058 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL549_RS12405 d685d2fa126af907a82c547145eafe48 72 Pfam PF11197 Protein of unknown function (DUF2835) 4 70 6.1E-28 T 28-03-2018 IPR021363 Protein of unknown function DUF2835 AL549_RS13765 4eb7d77ad266ee745a72ac5f46047399 165 Pfam PF13671 AAA domain 7 148 7.8E-20 T 28-03-2018 AL549_RS13765 4eb7d77ad266ee745a72ac5f46047399 165 SUPERFAMILY SSF52540 3 147 2.52E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS13765 4eb7d77ad266ee745a72ac5f46047399 165 Gene3D G3DSA:3.40.50.300 5 156 2.3E-13 T 28-03-2018 AL549_RS03185 763354a2c3f333d0c6b75358cc30d2a1 238 SMART SM00479 51 225 3.1E-18 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL549_RS03185 763354a2c3f333d0c6b75358cc30d2a1 238 Pfam PF00929 Exonuclease 54 216 6.1E-14 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL549_RS03185 763354a2c3f333d0c6b75358cc30d2a1 238 Gene3D G3DSA:3.30.420.10 42 231 1.3E-27 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS03185 763354a2c3f333d0c6b75358cc30d2a1 238 SUPERFAMILY SSF53098 43 222 1.25E-35 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS20080 c36483924f62ad9244d964021cdba038 498 SUPERFAMILY SSF52540 15 224 6.45E-10 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS20080 c36483924f62ad9244d964021cdba038 498 Gene3D G3DSA:3.40.50.300 8 182 5.1E-4 T 28-03-2018 AL549_RS20080 c36483924f62ad9244d964021cdba038 498 Gene3D G3DSA:3.30.70.1070 407 478 0.043 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL549_RS20080 c36483924f62ad9244d964021cdba038 498 Pfam PF13401 AAA domain 29 130 1.0E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS20080 c36483924f62ad9244d964021cdba038 498 Pfam PF05036 Sporulation related domain 411 484 3.6E-8 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL549_RS11555 1069c156fc10b85e8f06eb42323416de 301 Pfam PF03956 Lysine exporter LysO 112 297 1.1E-52 T 28-03-2018 IPR005642 Lysine exporter LysO AL549_RS11555 1069c156fc10b85e8f06eb42323416de 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 4.0E-87 T 28-03-2018 IPR005642 Lysine exporter LysO AL549_RS07330 6b9ba44b6f04953b11ab17860744d883 261 Pfam PF00005 ABC transporter 22 171 1.7E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS07330 6b9ba44b6f04953b11ab17860744d883 261 SMART SM00382 31 220 3.8E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS07330 6b9ba44b6f04953b11ab17860744d883 261 SUPERFAMILY SSF52540 6 232 9.78E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS07330 6b9ba44b6f04953b11ab17860744d883 261 Gene3D G3DSA:3.40.50.300 1 239 4.1E-50 T 28-03-2018 AL549_RS16920 bc94d6563ed3a24791bf3ce3052f3988 252 Pfam PF01048 Phosphorylase superfamily 20 240 1.9E-40 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL549_RS16920 bc94d6563ed3a24791bf3ce3052f3988 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 1.1E-109 T 28-03-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 AL549_RS16920 bc94d6563ed3a24791bf3ce3052f3988 252 Gene3D G3DSA:3.40.50.1580 2 252 6.8E-56 T 28-03-2018 AL549_RS16920 bc94d6563ed3a24791bf3ce3052f3988 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 28-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS16920 bc94d6563ed3a24791bf3ce3052f3988 252 SUPERFAMILY SSF53167 4 251 4.71E-72 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL549_RS14015 c18a2d45b2343746aebe633576e54c7f 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.8E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS03360 a425b9de3db57c2e7b0660b91388e64f 546 Pfam PF00884 Sulfatase 240 529 2.7E-48 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL549_RS03360 a425b9de3db57c2e7b0660b91388e64f 546 Gene3D G3DSA:3.40.720.10 230 535 1.4E-23 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS03360 a425b9de3db57c2e7b0660b91388e64f 546 SUPERFAMILY SSF53649 282 532 6.98E-18 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS03360 a425b9de3db57c2e7b0660b91388e64f 546 Pfam PF08019 Domain of unknown function (DUF1705) 58 209 1.0E-51 T 28-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AL549_RS06530 8c605047356c513da95f2765d5aa4e6b 308 Gene3D G3DSA:3.60.10.10 88 307 5.3E-17 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS06530 8c605047356c513da95f2765d5aa4e6b 308 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 93 298 5.4E-9 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS06530 8c605047356c513da95f2765d5aa4e6b 308 SUPERFAMILY SSF56219 86 306 1.16E-24 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS14730 17c39a2c1ebd01975125b2522b8d8f39 127 SUPERFAMILY SSF54593 3 126 1.48E-30 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS14730 17c39a2c1ebd01975125b2522b8d8f39 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 8.2E-20 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL549_RS14730 17c39a2c1ebd01975125b2522b8d8f39 127 Gene3D G3DSA:3.10.180.10 3 127 3.7E-27 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS20745 fb11cc8a2184b3ed95dd71eea3d3203a 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 5.7E-27 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS20745 fb11cc8a2184b3ed95dd71eea3d3203a 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 9.3E-39 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS20745 fb11cc8a2184b3ed95dd71eea3d3203a 202 Gene3D G3DSA:1.10.287.990 20 85 3.5E-23 T 28-03-2018 AL549_RS20745 fb11cc8a2184b3ed95dd71eea3d3203a 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.4E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS20745 fb11cc8a2184b3ed95dd71eea3d3203a 202 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 3.4E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS20745 fb11cc8a2184b3ed95dd71eea3d3203a 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.4E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS20745 fb11cc8a2184b3ed95dd71eea3d3203a 202 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 3.4E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS20745 fb11cc8a2184b3ed95dd71eea3d3203a 202 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 3.4E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS20745 fb11cc8a2184b3ed95dd71eea3d3203a 202 PIRSF PIRSF000349 1 202 3.5E-83 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS20745 fb11cc8a2184b3ed95dd71eea3d3203a 202 SUPERFAMILY SSF46609 1 86 5.11E-30 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS20745 fb11cc8a2184b3ed95dd71eea3d3203a 202 SUPERFAMILY SSF54719 87 201 2.49E-43 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS20745 fb11cc8a2184b3ed95dd71eea3d3203a 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 28-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL549_RS22440 72328900f2ac136ca7d47ec19fd44b42 313 PIRSF PIRSF035875 7 300 3.5E-55 T 28-03-2018 IPR017039 Virulence factor BrkB AL549_RS22440 72328900f2ac136ca7d47ec19fd44b42 313 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 20 296 23.94 T 28-03-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial AL549_RS22440 72328900f2ac136ca7d47ec19fd44b42 313 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 21 279 2.8E-82 T 28-03-2018 IPR017039 Virulence factor BrkB AL549_RS22440 72328900f2ac136ca7d47ec19fd44b42 313 Pfam PF03631 Virulence factor BrkB 32 280 7.5E-58 T 28-03-2018 IPR017039 Virulence factor BrkB AL549_RS00470 e34d2157b421c81553fe4fc9a6b4ccd0 310 Pfam PF03466 LysR substrate binding domain 100 300 8.4E-19 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS00470 e34d2157b421c81553fe4fc9a6b4ccd0 310 Gene3D G3DSA:1.10.10.10 6 91 1.0E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00470 e34d2157b421c81553fe4fc9a6b4ccd0 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 2.7E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS00470 e34d2157b421c81553fe4fc9a6b4ccd0 310 SUPERFAMILY SSF46785 8 88 2.27E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00470 e34d2157b421c81553fe4fc9a6b4ccd0 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 7.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS00470 e34d2157b421c81553fe4fc9a6b4ccd0 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 7.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS00470 e34d2157b421c81553fe4fc9a6b4ccd0 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 7.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS00470 e34d2157b421c81553fe4fc9a6b4ccd0 310 Gene3D G3DSA:3.40.190.10 98 188 2.0E-9 T 28-03-2018 AL549_RS00470 e34d2157b421c81553fe4fc9a6b4ccd0 310 Gene3D G3DSA:3.40.190.10 189 273 2.4E-13 T 28-03-2018 AL549_RS00470 e34d2157b421c81553fe4fc9a6b4ccd0 310 SUPERFAMILY SSF53850 94 300 2.71E-40 T 28-03-2018 AL549_RS17335 75982410a5e4c2f06adc41b377d6f801 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 8.7E-17 T 28-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AL549_RS17335 75982410a5e4c2f06adc41b377d6f801 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 4.4E-20 T 28-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AL549_RS23655 021a3583a6ef18ff92ca97bf94664467 601 Pfam PF00501 AMP-binding enzyme 14 466 1.5E-97 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL549_RS23655 021a3583a6ef18ff92ca97bf94664467 601 SUPERFAMILY SSF56801 7 285 5.23E-112 T 28-03-2018 AL549_RS23655 021a3583a6ef18ff92ca97bf94664467 601 SUPERFAMILY SSF56801 336 596 5.23E-112 T 28-03-2018 AL549_RS23655 021a3583a6ef18ff92ca97bf94664467 601 Gene3D G3DSA:3.40.50.980 7 188 3.3E-36 T 28-03-2018 AL549_RS23655 021a3583a6ef18ff92ca97bf94664467 601 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL549_RS23655 021a3583a6ef18ff92ca97bf94664467 601 Gene3D G3DSA:2.30.38.10 381 459 3.6E-18 T 28-03-2018 AL549_RS23655 021a3583a6ef18ff92ca97bf94664467 601 Gene3D G3DSA:3.40.50.980 189 380 3.2E-42 T 28-03-2018 AL549_RS23655 021a3583a6ef18ff92ca97bf94664467 601 Gene3D G3DSA:3.30.300.30 461 597 1.2E-16 T 28-03-2018 AL549_RS17710 463e0721eaced24f9d09cce399e87232 243 Pfam PF00929 Exonuclease 13 180 5.3E-38 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL549_RS17710 463e0721eaced24f9d09cce399e87232 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 11 226 3.6E-80 T 28-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS17710 463e0721eaced24f9d09cce399e87232 243 SUPERFAMILY SSF53098 10 190 2.05E-53 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS17710 463e0721eaced24f9d09cce399e87232 243 Gene3D G3DSA:3.30.420.10 1 191 2.8E-40 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS17710 463e0721eaced24f9d09cce399e87232 243 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 243 6.3E-98 T 28-03-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS17710 463e0721eaced24f9d09cce399e87232 243 SMART SM00479 11 189 6.1E-52 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL549_RS04500 07106282470a57532a15f5e96d64102e 298 Pfam PF02104 SURF1 family 62 270 1.4E-22 T 28-03-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS20430 77ba8cd80dd045a4d7aada70df31b3b6 338 Gene3D G3DSA:1.10.240.10 205 317 1.3E-30 T 28-03-2018 AL549_RS20430 77ba8cd80dd045a4d7aada70df31b3b6 338 Gene3D G3DSA:3.40.50.620 2 204 5.0E-73 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS20430 77ba8cd80dd045a4d7aada70df31b3b6 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 2.8E-76 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS20430 77ba8cd80dd045a4d7aada70df31b3b6 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 3.7E-108 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL549_RS20430 77ba8cd80dd045a4d7aada70df31b3b6 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL549_RS20430 77ba8cd80dd045a4d7aada70df31b3b6 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL549_RS20430 77ba8cd80dd045a4d7aada70df31b3b6 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL549_RS20430 77ba8cd80dd045a4d7aada70df31b3b6 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL549_RS20430 77ba8cd80dd045a4d7aada70df31b3b6 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.647 T 28-03-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 AL549_RS20430 77ba8cd80dd045a4d7aada70df31b3b6 338 SUPERFAMILY SSF52374 5 334 8.44E-92 T 28-03-2018 AL549_RS04485 9e6948b172d31251d3787a39b4b46a92 203 Gene3D G3DSA:2.60.370.10 57 178 5.0E-42 T 28-03-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04485 9e6948b172d31251d3787a39b4b46a92 203 PIRSF PIRSF005413 2 193 2.8E-69 T 28-03-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04485 9e6948b172d31251d3787a39b4b46a92 203 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 29 173 7.3E-48 T 28-03-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS04485 9e6948b172d31251d3787a39b4b46a92 203 SUPERFAMILY SSF110111 57 174 4.84E-45 T 28-03-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS05400 8cd8070bfe73a19244a1d1cab4883c4c 963 Gene3D G3DSA:2.130.10.10 469 622 2.0E-11 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL549_RS05400 8cd8070bfe73a19244a1d1cab4883c4c 963 Gene3D G3DSA:2.130.10.10 402 468 2.1E-5 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL549_RS05400 8cd8070bfe73a19244a1d1cab4883c4c 963 SUPERFAMILY SSF82171 371 576 5.49E-21 T 28-03-2018 AL549_RS09045 986a0cae24992ddd1709b721fe15a203 193 SMART SM00463 92 175 1.0E-12 T 28-03-2018 IPR002625 Smr domain AL549_RS09045 986a0cae24992ddd1709b721fe15a203 193 Pfam PF01713 Smr domain 95 174 5.9E-18 T 28-03-2018 IPR002625 Smr domain AL549_RS09045 986a0cae24992ddd1709b721fe15a203 193 SUPERFAMILY SSF160443 93 174 3.92E-13 T 28-03-2018 IPR002625 Smr domain AL549_RS10585 c4a31401f6becc9bbc2fee4cd3730d18 213 Gene3D G3DSA:1.25.40.10 130 208 4.8E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS10585 c4a31401f6becc9bbc2fee4cd3730d18 213 SUPERFAMILY SSF48452 72 188 1.04E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS10585 c4a31401f6becc9bbc2fee4cd3730d18 213 Gene3D G3DSA:1.25.40.10 57 129 6.3E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS03535 c0ab4d649c157bef2a383ee2c9afc48f 567 Pfam PF11604 Copper binding periplasmic protein CusF 497 562 8.4E-16 T 28-03-2018 IPR021647 Copper binding periplasmic protein CusF AL549_RS03535 c0ab4d649c157bef2a383ee2c9afc48f 567 Pfam PF11604 Copper binding periplasmic protein CusF 417 483 1.1E-24 T 28-03-2018 IPR021647 Copper binding periplasmic protein CusF AL549_RS03535 c0ab4d649c157bef2a383ee2c9afc48f 567 Gene3D G3DSA:2.40.50.100 122 249 6.4E-12 T 28-03-2018 AL549_RS03535 c0ab4d649c157bef2a383ee2c9afc48f 567 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 109 317 8.2E-77 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL549_RS03535 c0ab4d649c157bef2a383ee2c9afc48f 567 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 212 390 2.0E-31 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL549_RS03535 c0ab4d649c157bef2a383ee2c9afc48f 567 SUPERFAMILY SSF111369 130 322 4.18E-15 T 28-03-2018 AL549_RS21025 1f1148fd4f9a5f1ca9b79336f0eee913 145 Gene3D G3DSA:3.40.630.30 3 145 8.3E-9 T 28-03-2018 AL549_RS21025 1f1148fd4f9a5f1ca9b79336f0eee913 145 Pfam PF13673 Acetyltransferase (GNAT) domain 32 117 4.7E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS21025 1f1148fd4f9a5f1ca9b79336f0eee913 145 SUPERFAMILY SSF55729 10 118 3.92E-11 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS10440 e7cff711f6c96ab4d5e7d0d2ff5cd408 41 Pfam PF08056 Tryptophan operon leader peptide 1 41 1.2E-30 T 28-03-2018 IPR012639 Tryptophan operon leader peptide AL549_RS10440 e7cff711f6c96ab4d5e7d0d2ff5cd408 41 ProDom PD926058 BIOSYNTHESIS PEPTIDE LEADER AROMATIC VC1176 VV1222 OPERON ACID AMINO AMINO-ACID 1 41 1.0E-7 T 28-03-2018 IPR012639 Tryptophan operon leader peptide AL549_RS06145 e77cd31ca5394f00cca47151243325a6 313 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 33 300 5.6E-30 T 28-03-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AL549_RS07000 62620f661e462447c887e2caa484b5a1 285 Pfam PF02698 DUF218 domain 6 132 2.9E-14 T 28-03-2018 IPR003848 Domain of unknown function DUF218 AL549_RS07000 62620f661e462447c887e2caa484b5a1 285 Gene3D G3DSA:3.40.50.620 1 138 3.7E-17 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS19205 d2ce172a74c15c2121baa886d3ca5604 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 237 250 - T 28-03-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AL549_RS19205 d2ce172a74c15c2121baa886d3ca5604 299 SUPERFAMILY SSF51306 78 298 3.56E-69 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL549_RS19205 d2ce172a74c15c2121baa886d3ca5604 299 Pfam PF10502 Signal peptidase, peptidase S26 209 269 1.8E-8 T 28-03-2018 IPR019533 Peptidase S26 AL549_RS19205 d2ce172a74c15c2121baa886d3ca5604 299 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 272 5.0E-47 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL549_RS19205 d2ce172a74c15c2121baa886d3ca5604 299 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 28-03-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AL549_RS19205 d2ce172a74c15c2121baa886d3ca5604 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 28-03-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 AL549_RS19205 d2ce172a74c15c2121baa886d3ca5604 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 6.0E-27 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL549_RS19205 d2ce172a74c15c2121baa886d3ca5604 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 6.0E-27 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL549_RS19205 d2ce172a74c15c2121baa886d3ca5604 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 232 251 6.0E-27 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL549_RS19205 d2ce172a74c15c2121baa886d3ca5604 299 Pfam PF00717 Peptidase S24-like 86 166 1.8E-21 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL549_RS19205 d2ce172a74c15c2121baa886d3ca5604 299 Gene3D G3DSA:2.10.109.10 76 295 3.3E-55 T 28-03-2018 AL549_RS15340 aed653f4a712bcd0122e4e493bb3f7b8 183 Gene3D G3DSA:3.30.110.10 91 183 2.2E-33 T 28-03-2018 AL549_RS15340 aed653f4a712bcd0122e4e493bb3f7b8 183 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 19 183 1.4E-70 T 28-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL549_RS15340 aed653f4a712bcd0122e4e493bb3f7b8 183 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 12 183 30.017 T 28-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL549_RS15340 aed653f4a712bcd0122e4e493bb3f7b8 183 Gene3D G3DSA:3.10.20.80 13 90 2.6E-29 T 28-03-2018 AL549_RS15340 aed653f4a712bcd0122e4e493bb3f7b8 183 SUPERFAMILY SSF55200 95 183 6.8E-33 T 28-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AL549_RS15340 aed653f4a712bcd0122e4e493bb3f7b8 183 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 95 181 2.0E-35 T 28-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AL549_RS15340 aed653f4a712bcd0122e4e493bb3f7b8 183 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 18 88 9.7E-28 T 28-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL549_RS15340 aed653f4a712bcd0122e4e493bb3f7b8 183 ProSitePatterns PS00938 Initiation factor 3 signature. 70 83 - T 28-03-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 AL549_RS15340 aed653f4a712bcd0122e4e493bb3f7b8 183 SUPERFAMILY SSF54364 16 90 8.11E-26 T 28-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL549_RS04685 dc1611aa618728e2363884b70b4a33e2 119 Pfam PF13417 Glutathione S-transferase, N-terminal domain 43 119 6.0E-11 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL549_RS04685 dc1611aa618728e2363884b70b4a33e2 119 Gene3D G3DSA:3.40.30.10 27 119 1.5E-15 T 28-03-2018 AL549_RS04685 dc1611aa618728e2363884b70b4a33e2 119 SUPERFAMILY SSF52833 42 119 2.9E-19 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS22810 44ba9814a15ad4a59619bc2f5b9e5bb7 381 Gene3D G3DSA:3.40.640.10 28 268 2.7E-40 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS22810 44ba9814a15ad4a59619bc2f5b9e5bb7 381 SUPERFAMILY SSF53383 19 378 8.02E-92 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS22810 44ba9814a15ad4a59619bc2f5b9e5bb7 381 Gene3D G3DSA:3.90.1150.10 269 379 1.6E-24 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS22810 44ba9814a15ad4a59619bc2f5b9e5bb7 381 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 20 376 4.1E-165 T 28-03-2018 IPR026385 Aminotransferase, LLPSF_NHT_00031 family AL549_RS22810 44ba9814a15ad4a59619bc2f5b9e5bb7 381 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 30 378 4.7E-82 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AL549_RS22810 44ba9814a15ad4a59619bc2f5b9e5bb7 381 PIRSF PIRSF000390 15 379 6.4E-87 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AL549_RS14210 b801cca9d31fa96057a7384f45bf9bdb 165 Pfam PF11665 Protein of unknown function (DUF3265) 1 19 2.4E-6 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS00125 5b6b73cd4cb196bdf71906c272d035a5 346 Pfam PF13439 Glycosyltransferase Family 4 26 158 9.9E-13 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL549_RS00125 5b6b73cd4cb196bdf71906c272d035a5 346 Pfam PF00534 Glycosyl transferases group 1 173 319 5.5E-35 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL549_RS00125 5b6b73cd4cb196bdf71906c272d035a5 346 SUPERFAMILY SSF53756 7 342 3.93E-70 T 28-03-2018 AL549_RS00125 5b6b73cd4cb196bdf71906c272d035a5 346 Gene3D G3DSA:3.40.50.2000 173 333 3.9E-38 T 28-03-2018 AL549_RS00125 5b6b73cd4cb196bdf71906c272d035a5 346 Gene3D G3DSA:3.40.50.2000 14 172 6.5E-8 T 28-03-2018 AL549_RS01320 64365c0443c3f73442663c8139479bf5 636 Pfam PF13289 SIR2-like domain 117 238 1.2E-12 T 28-03-2018 AL549_RS01320 64365c0443c3f73442663c8139479bf5 636 SUPERFAMILY SSF52467 21 130 1.12E-13 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL549_RS01320 64365c0443c3f73442663c8139479bf5 636 SUPERFAMILY SSF52467 157 219 1.12E-13 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL549_RS01320 64365c0443c3f73442663c8139479bf5 636 Gene3D G3DSA:3.40.50.1220 7 196 8.1E-10 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL549_RS16540 10a5d7d247c8b0fa9fa02a6b8376e0a8 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 234 241 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL549_RS16540 10a5d7d247c8b0fa9fa02a6b8376e0a8 494 SUPERFAMILY SSF53720 19 482 4.45E-112 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL549_RS16540 10a5d7d247c8b0fa9fa02a6b8376e0a8 494 Gene3D G3DSA:3.40.309.10 253 441 2.6E-58 T 28-03-2018 AL549_RS16540 10a5d7d247c8b0fa9fa02a6b8376e0a8 494 Pfam PF00171 Aldehyde dehydrogenase family 16 456 4.7E-85 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL549_RS16540 10a5d7d247c8b0fa9fa02a6b8376e0a8 494 Gene3D G3DSA:3.40.605.10 7 252 9.1E-58 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL549_RS16540 10a5d7d247c8b0fa9fa02a6b8376e0a8 494 PIRSF PIRSF036492 13 491 5.4E-150 T 28-03-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 AL549_RS15190 e960d376f20fed7de997cf8f24ab730a 122 Gene3D G3DSA:3.10.180.10 2 121 2.4E-15 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS15190 e960d376f20fed7de997cf8f24ab730a 122 SUPERFAMILY SSF54593 3 121 5.64E-20 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS15190 e960d376f20fed7de997cf8f24ab730a 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 118 9.5E-8 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL549_RS12255 554c5040ac9862483da6cc7b9c6a7e76 392 Gene3D G3DSA:3.40.50.2000 10 217 5.4E-5 T 28-03-2018 AL549_RS12255 554c5040ac9862483da6cc7b9c6a7e76 392 SUPERFAMILY SSF53756 91 391 1.32E-18 T 28-03-2018 AL549_RS12255 554c5040ac9862483da6cc7b9c6a7e76 392 SUPERFAMILY SSF53756 11 44 1.32E-18 T 28-03-2018 AL549_RS12255 554c5040ac9862483da6cc7b9c6a7e76 392 Gene3D G3DSA:3.40.50.2000 218 374 7.0E-15 T 28-03-2018 AL549_RS19065 1c1c1e690a930269884cf5569782c4d8 395 SUPERFAMILY SSF53633 6 236 5.89E-74 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL549_RS19065 1c1c1e690a930269884cf5569782c4d8 395 Pfam PF00696 Amino acid kinase family 5 231 8.5E-53 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL549_RS19065 1c1c1e690a930269884cf5569782c4d8 395 Gene3D G3DSA:3.30.70.260 246 280 0.086 T 28-03-2018 AL549_RS19065 1c1c1e690a930269884cf5569782c4d8 395 Gene3D G3DSA:3.30.70.260 310 392 1.0E-7 T 28-03-2018 AL549_RS19065 1c1c1e690a930269884cf5569782c4d8 395 PIRSF PIRSF000726 3 63 1.5E-22 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS19065 1c1c1e690a930269884cf5569782c4d8 395 PIRSF PIRSF000726 59 313 3.5E-74 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS19065 1c1c1e690a930269884cf5569782c4d8 395 PIRSF PIRSF000726 298 386 2.9 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS19065 1c1c1e690a930269884cf5569782c4d8 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 64 379 7.6E-77 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS19065 1c1c1e690a930269884cf5569782c4d8 395 Gene3D G3DSA:3.40.1160.10 3 245 7.1E-73 T 28-03-2018 AL549_RS19065 1c1c1e690a930269884cf5569782c4d8 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL549_RS09820 8a84db157dc92efbc23811c23ccb95c5 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 1.2E-84 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL549_RS09820 8a84db157dc92efbc23811c23ccb95c5 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 2.2E-116 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL549_RS09820 8a84db157dc92efbc23811c23ccb95c5 453 PIRSF PIRSF006066 272 447 6.1E-50 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL549_RS09820 8a84db157dc92efbc23811c23ccb95c5 453 PIRSF PIRSF006066 1 267 1.2E-92 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL549_RS21820 cbabc1113e0113d85d1de0ac2739ed19 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.268 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AL549_RS21820 cbabc1113e0113d85d1de0ac2739ed19 156 Gene3D G3DSA:1.20.5.620 62 122 1.2E-12 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain AL549_RS21820 cbabc1113e0113d85d1de0ac2739ed19 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 2.6E-35 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AL549_RS21820 cbabc1113e0113d85d1de0ac2739ed19 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.1E-58 T 28-03-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 AL549_RS21820 cbabc1113e0113d85d1de0ac2739ed19 156 SUPERFAMILY SSF81573 63 121 2.48E-14 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain AL549_RS03555 e44e983a81632dec3cc7e63dc8df587f 142 Pfam PF05618 Putative ATP-dependant zinc protease 6 139 1.0E-28 T 28-03-2018 AL549_RS03555 e44e983a81632dec3cc7e63dc8df587f 142 SUPERFAMILY SSF50630 6 140 2.34E-40 T 28-03-2018 IPR021109 Aspartic peptidase domain AL549_RS03555 e44e983a81632dec3cc7e63dc8df587f 142 Gene3D G3DSA:2.40.70.10 3 133 9.1E-33 T 28-03-2018 IPR021109 Aspartic peptidase domain AL549_RS23265 9ef4743fb58db171d3fa0535a87dfc63 150 SUPERFAMILY SSF55729 1 149 3.9E-37 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS23265 9ef4743fb58db171d3fa0535a87dfc63 150 Pfam PF13673 Acetyltransferase (GNAT) domain 46 148 1.2E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS23265 9ef4743fb58db171d3fa0535a87dfc63 150 Gene3D G3DSA:3.40.630.30 1 149 2.6E-29 T 28-03-2018 AL549_RS05465 b24e38f2633edc13a156c8d329ad0c73 425 SMART SM00028 104 137 6.5 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS05465 b24e38f2633edc13a156c8d329ad0c73 425 SMART SM00028 342 375 390.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS05465 b24e38f2633edc13a156c8d329ad0c73 425 SMART SM00028 278 311 48.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS05465 b24e38f2633edc13a156c8d329ad0c73 425 SMART SM00028 66 99 72.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS05465 b24e38f2633edc13a156c8d329ad0c73 425 Gene3D G3DSA:1.25.40.10 130 244 4.0E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS05465 b24e38f2633edc13a156c8d329ad0c73 425 Gene3D G3DSA:1.25.40.10 22 129 8.4E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS05465 b24e38f2633edc13a156c8d329ad0c73 425 Pfam PF13428 Tetratricopeptide repeat 107 149 5.0E-5 T 28-03-2018 AL549_RS05465 b24e38f2633edc13a156c8d329ad0c73 425 Gene3D G3DSA:1.25.40.10 245 398 1.7E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS05465 b24e38f2633edc13a156c8d329ad0c73 425 SUPERFAMILY SSF48452 57 235 5.24E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS14690 082aa6dc23ddf277069f012753c84468 106 Pfam PF13711 Domain of unknown function (DUF4160) 9 79 1.2E-14 T 28-03-2018 IPR025427 Protein of unknown function DUF4160 AL549_RS21520 83a3a1d31c836b82dfc757a173e0c2a5 518 SUPERFAMILY SSF53850 26 516 5.43E-129 T 28-03-2018 AL549_RS21520 83a3a1d31c836b82dfc757a173e0c2a5 518 Gene3D G3DSA:3.90.76.10 33 176 3.2E-33 T 28-03-2018 AL549_RS21520 83a3a1d31c836b82dfc757a173e0c2a5 518 Gene3D G3DSA:3.40.190.10 179 280 1.2E-24 T 28-03-2018 AL549_RS21520 83a3a1d31c836b82dfc757a173e0c2a5 518 Gene3D G3DSA:3.10.105.10 281 488 1.1E-51 T 28-03-2018 AL549_RS21520 83a3a1d31c836b82dfc757a173e0c2a5 518 PIRSF PIRSF002741 20 502 1.1E-94 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL549_RS21520 83a3a1d31c836b82dfc757a173e0c2a5 518 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 28-03-2018 IPR023765 Solute-binding protein family 5, conserved site AL549_RS21520 83a3a1d31c836b82dfc757a173e0c2a5 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 425 2.6E-86 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL549_RS17610 f9f2b12dfca0a0bb0f9db49cafdac1ef 356 Pfam PF01594 AI-2E family transporter 20 345 2.5E-78 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like AL549_RS20170 10ce6e4ad02671c37fca7ae5a9dfe88d 297 SUPERFAMILY SSF51730 22 294 7.65E-96 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like AL549_RS20170 10ce6e4ad02671c37fca7ae5a9dfe88d 297 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 3.7E-102 T 28-03-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 AL549_RS20170 10ce6e4ad02671c37fca7ae5a9dfe88d 297 Gene3D G3DSA:3.20.20.220 1 297 1.5E-97 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like AL549_RS20170 10ce6e4ad02671c37fca7ae5a9dfe88d 297 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 2.3E-101 T 28-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL549_RS22700 27fe97cfa6583f948daae4788429cf48 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 2.3E-34 T 28-03-2018 IPR013551 Domain of unknown function DUF1732 AL549_RS22700 27fe97cfa6583f948daae4788429cf48 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 5.3E-44 T 28-03-2018 IPR013527 YicC-like, N-terminal AL549_RS22700 27fe97cfa6583f948daae4788429cf48 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 3.8E-119 T 28-03-2018 IPR005229 Conserved hypothetical protein CHP00255 AL549_RS02330 cadc0ed01c27855cfd862cc4c2b47758 324 Pfam PF02274 Amidinotransferase 22 317 2.4E-62 T 28-03-2018 AL549_RS02330 cadc0ed01c27855cfd862cc4c2b47758 324 Gene3D G3DSA:3.75.10.10 14 316 2.2E-38 T 28-03-2018 AL549_RS02330 cadc0ed01c27855cfd862cc4c2b47758 324 PIRSF PIRSF028188 3 320 5.9E-151 T 28-03-2018 IPR014541 Predicted amidinotransferase, FN0238 type AL549_RS02330 cadc0ed01c27855cfd862cc4c2b47758 324 SUPERFAMILY SSF55909 18 312 2.52E-36 T 28-03-2018 AL549_RS02920 6e4dee5282e69cb30885a10148f7998e 398 SUPERFAMILY SSF52540 73 358 3.49E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS02920 6e4dee5282e69cb30885a10148f7998e 398 SMART SM00487 20 221 1.2E-62 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL549_RS02920 6e4dee5282e69cb30885a10148f7998e 398 Pfam PF00271 Helicase conserved C-terminal domain 232 338 1.3E-25 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS02920 6e4dee5282e69cb30885a10148f7998e 398 Pfam PF00270 DEAD/DEAH box helicase 25 194 5.7E-50 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL549_RS02920 6e4dee5282e69cb30885a10148f7998e 398 Gene3D G3DSA:3.40.50.300 225 396 2.7E-40 T 28-03-2018 AL549_RS02920 6e4dee5282e69cb30885a10148f7998e 398 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL549_RS02920 6e4dee5282e69cb30885a10148f7998e 398 SMART SM00490 257 338 4.0E-28 T 28-03-2018 IPR001650 Helicase, C-terminal AL549_RS02920 6e4dee5282e69cb30885a10148f7998e 398 Gene3D G3DSA:3.40.50.300 1 224 1.4E-58 T 28-03-2018 AL549_RS21670 fd5809ea035b81c4a67ab944f8cd504c 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 28-03-2018 IPR001455 TusA-like domain AL549_RS21670 fd5809ea035b81c4a67ab944f8cd504c 81 Gene3D G3DSA:3.30.110.40 7 81 2.3E-26 T 28-03-2018 IPR001455 TusA-like domain AL549_RS21670 fd5809ea035b81c4a67ab944f8cd504c 81 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 28.815 T 28-03-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 AL549_RS21670 fd5809ea035b81c4a67ab944f8cd504c 81 Pfam PF01206 Sulfurtransferase TusA 10 79 1.0E-22 T 28-03-2018 IPR001455 TusA-like domain AL549_RS21670 fd5809ea035b81c4a67ab944f8cd504c 81 SUPERFAMILY SSF64307 9 80 1.29E-24 T 28-03-2018 IPR001455 TusA-like domain AL549_RS21865 3b35b9a9957ec1b7d074c10ff85eb077 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 368 3.6E-81 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AL549_RS21865 3b35b9a9957ec1b7d074c10ff85eb077 401 SUPERFAMILY SSF103473 6 376 5.23E-51 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS21865 3b35b9a9957ec1b7d074c10ff85eb077 401 Gene3D G3DSA:1.20.1250.20 2 192 1.2E-22 T 28-03-2018 AL549_RS21865 3b35b9a9957ec1b7d074c10ff85eb077 401 Gene3D G3DSA:1.20.1250.20 193 383 4.1E-17 T 28-03-2018 AL549_RS21865 3b35b9a9957ec1b7d074c10ff85eb077 401 Pfam PF07690 Major Facilitator Superfamily 13 349 1.7E-35 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS12580 8773c3f7a489519868a604d527e49c70 256 Gene3D G3DSA:1.10.3720.10 5 256 6.9E-38 T 28-03-2018 AL549_RS12580 8773c3f7a489519868a604d527e49c70 256 SUPERFAMILY SSF161098 4 254 5.79E-54 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS12580 8773c3f7a489519868a604d527e49c70 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 7.9E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS22965 02ed26211fba643254012fe67e499296 119 Gene3D G3DSA:1.20.1440.60 2 116 2.7E-29 T 28-03-2018 IPR012657 23S rRNA-intervening sequence protein AL549_RS22965 02ed26211fba643254012fe67e499296 119 Pfam PF05635 23S rRNA-intervening sequence protein 7 108 3.3E-31 T 28-03-2018 IPR012657 23S rRNA-intervening sequence protein AL549_RS22965 02ed26211fba643254012fe67e499296 119 SUPERFAMILY SSF158446 4 112 1.15E-33 T 28-03-2018 IPR012657 23S rRNA-intervening sequence protein AL549_RS22965 02ed26211fba643254012fe67e499296 119 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 11 112 6.6E-32 T 28-03-2018 IPR012657 23S rRNA-intervening sequence protein AL549_RS16220 2e6db0037d13eebee6b81552f7468038 321 Gene3D G3DSA:3.40.50.2300 153 287 6.0E-19 T 28-03-2018 AL549_RS16220 2e6db0037d13eebee6b81552f7468038 321 SUPERFAMILY SSF53822 42 252 5.5E-20 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS16220 2e6db0037d13eebee6b81552f7468038 321 Gene3D G3DSA:3.40.50.2300 26 152 2.7E-22 T 28-03-2018 AL549_RS16220 2e6db0037d13eebee6b81552f7468038 321 Pfam PF04392 ABC transporter substrate binding protein 29 321 2.2E-115 T 28-03-2018 IPR007487 ABC transporter, substrate-binding protein AL549_RS23640 2c378eb0b14254918b0a0bee31e747b1 185 Pfam PF01569 PAP2 superfamily 70 182 3.6E-21 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL549_RS23640 2c378eb0b14254918b0a0bee31e747b1 185 Gene3D G3DSA:1.20.144.10 23 182 8.3E-28 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL549_RS23640 2c378eb0b14254918b0a0bee31e747b1 185 SUPERFAMILY SSF48317 17 182 7.06E-38 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL549_RS23640 2c378eb0b14254918b0a0bee31e747b1 185 SMART SM00014 71 180 5.8E-19 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL549_RS06605 8b57a63cf3ab5288d20b0669599775d0 146 Pfam PF01478 Type IV leader peptidase family 8 104 6.6E-7 T 28-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AL549_RS07475 e8c6d1490fbf56fed53ffe3dc8e7aa48 197 Pfam PF04972 BON domain 44 110 1.2E-10 T 28-03-2018 IPR007055 BON domain AL549_RS07475 e8c6d1490fbf56fed53ffe3dc8e7aa48 197 Pfam PF04972 BON domain 120 185 3.8E-19 T 28-03-2018 IPR007055 BON domain AL549_RS07475 e8c6d1490fbf56fed53ffe3dc8e7aa48 197 SMART SM00749 125 188 1.9E-5 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AL549_RS07475 e8c6d1490fbf56fed53ffe3dc8e7aa48 197 SMART SM00749 48 111 11.0 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AL549_RS22305 d1024fba42d825302df78b92e28ac8b8 275 SUPERFAMILY SSF109604 5 254 2.95E-56 T 28-03-2018 AL549_RS22305 d1024fba42d825302df78b92e28ac8b8 275 Pfam PF08668 HDOD domain 13 203 2.6E-52 T 28-03-2018 IPR013976 Metal-dependent hydrolase HDOD AL549_RS22305 d1024fba42d825302df78b92e28ac8b8 275 Gene3D G3DSA:1.10.3210.10 2 257 4.6E-38 T 28-03-2018 AL549_RS15720 d79033f5d57aa73bbd11bc04b54928ef 148 Pfam PF05099 Tellurite resistance protein TerB 9 143 8.2E-40 T 28-03-2018 IPR007791 Co-chaperone DjlA, N-terminal AL549_RS15720 d79033f5d57aa73bbd11bc04b54928ef 148 Gene3D G3DSA:1.10.3680.10 6 147 1.9E-32 T 28-03-2018 IPR029024 TerB-like AL549_RS15720 d79033f5d57aa73bbd11bc04b54928ef 148 SUPERFAMILY SSF158682 2 147 2.35E-30 T 28-03-2018 AL549_RS16690 63616cffd534d4e21fbf057ad2f9830e 313 Gene3D G3DSA:2.40.160.10 29 313 2.7E-23 T 28-03-2018 AL549_RS16690 63616cffd534d4e21fbf057ad2f9830e 313 SUPERFAMILY SSF56935 31 313 3.66E-26 T 28-03-2018 AL549_RS16690 63616cffd534d4e21fbf057ad2f9830e 313 Pfam PF13609 Gram-negative porin 7 298 7.5E-27 T 28-03-2018 AL549_RS05160 c9846538821cee33523b9ca35def2b23 113 SUPERFAMILY SSF160424 1 101 1.7E-14 T 28-03-2018 IPR006728 Protein of unknown function DUF600 AL549_RS05160 c9846538821cee33523b9ca35def2b23 113 Gene3D G3DSA:3.30.500.20 2 100 2.7E-11 T 28-03-2018 AL549_RS16880 6f79ef9cbc34a206bc0360ef49695be9 180 SUPERFAMILY SSF53474 2 176 2.01E-6 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS16880 6f79ef9cbc34a206bc0360ef49695be9 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 2.4E-71 T 28-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AL549_RS16880 6f79ef9cbc34a206bc0360ef49695be9 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 49.556 T 28-03-2018 IPR022987 Uncharacterised protein family UPF0227 AL549_RS16880 6f79ef9cbc34a206bc0360ef49695be9 180 Gene3D G3DSA:3.40.50.1820 1 179 1.6E-4 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS08485 ef684a2c5e8ae5188935ccee9ee577fa 261 Pfam PF00950 ABC 3 transport family 161 243 3.0E-5 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AL549_RS21455 e953375afd57ca902a2342c7bf895277 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL549_RS21455 e953375afd57ca902a2342c7bf895277 598 Pfam PF00920 Dehydratase family 68 594 1.1E-145 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL549_RS21455 e953375afd57ca902a2342c7bf895277 598 SUPERFAMILY SSF52016 418 596 3.06E-51 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL549_RS21455 e953375afd57ca902a2342c7bf895277 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL549_RS21455 e953375afd57ca902a2342c7bf895277 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 596 9.8E-248 T 28-03-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 AL549_RS21455 e953375afd57ca902a2342c7bf895277 598 SUPERFAMILY SSF143975 3 408 5.62E-130 T 28-03-2018 AL549_RS15655 0b99e00b4bd47c74455aeaa7ae2a4b87 293 Pfam PF00482 Type II secretion system (T2SS), protein F 153 281 1.4E-19 T 28-03-2018 IPR018076 Type II secretion system F domain AL549_RS05205 feefa3e95a9c46321ccf5cefb0e40cae 617 Gene3D G3DSA:1.10.3680.10 441 614 1.3E-16 T 28-03-2018 IPR029024 TerB-like AL549_RS05205 feefa3e95a9c46321ccf5cefb0e40cae 617 Gene3D G3DSA:3.30.2010.10 94 186 2.1E-16 T 28-03-2018 AL549_RS05205 feefa3e95a9c46321ccf5cefb0e40cae 617 Pfam PF01435 Peptidase family M48 103 329 8.9E-27 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL549_RS07305 51e0e21a25b7d66c32da7e73b0641b7a 240 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 162 239 1.3E-23 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL549_RS07305 51e0e21a25b7d66c32da7e73b0641b7a 240 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 163 239 1.6E-21 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL549_RS07305 51e0e21a25b7d66c32da7e73b0641b7a 240 Gene3D G3DSA:3.30.1150.10 55 240 2.0E-20 T 28-03-2018 AL549_RS07305 51e0e21a25b7d66c32da7e73b0641b7a 240 PRINTS PR01374 Gram-negative bacterial tonB protein signature 157 178 9.0E-6 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL549_RS07305 51e0e21a25b7d66c32da7e73b0641b7a 240 PRINTS PR01374 Gram-negative bacterial tonB protein signature 178 196 9.0E-6 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL549_RS07305 51e0e21a25b7d66c32da7e73b0641b7a 240 PRINTS PR01374 Gram-negative bacterial tonB protein signature 72 82 9.0E-6 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL549_RS07305 51e0e21a25b7d66c32da7e73b0641b7a 240 SUPERFAMILY SSF74653 160 237 5.49E-23 T 28-03-2018 AL549_RS07230 7a06048eddba0337939a8e78bc847637 129 Gene3D G3DSA:3.90.1590.10 2 127 5.6E-15 T 28-03-2018 AL549_RS07230 7a06048eddba0337939a8e78bc847637 129 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 29 109 1.1E-11 T 28-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AL549_RS07230 7a06048eddba0337939a8e78bc847637 129 SUPERFAMILY SSF51316 6 110 2.3E-20 T 28-03-2018 IPR011057 Mss4-like AL549_RS18305 0f83b1a8c06ed38ca211fe5e84a7142f 329 Pfam PF00482 Type II secretion system (T2SS), protein F 189 317 6.1E-23 T 28-03-2018 IPR018076 Type II secretion system F domain AL549_RS07200 a29c945f421c36bfeeadfd191a0e2ba6 291 SUPERFAMILY SSF48179 166 289 5.67E-39 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL549_RS07200 a29c945f421c36bfeeadfd191a0e2ba6 291 PIRSF PIRSF000103 1 291 6.1E-75 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL549_RS07200 a29c945f421c36bfeeadfd191a0e2ba6 291 SUPERFAMILY SSF51735 4 166 3.52E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS07200 a29c945f421c36bfeeadfd191a0e2ba6 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 162 1.2E-47 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AL549_RS07200 a29c945f421c36bfeeadfd191a0e2ba6 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 287 2.2E-32 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AL549_RS07200 a29c945f421c36bfeeadfd191a0e2ba6 291 Gene3D G3DSA:3.40.50.720 3 166 5.3E-36 T 28-03-2018 AL549_RS07200 a29c945f421c36bfeeadfd191a0e2ba6 291 Gene3D G3DSA:1.10.1040.10 167 291 2.3E-33 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL549_RS16635 905f477f972b7f14d3f56368e7c51c6f 428 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 28-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL549_RS16635 905f477f972b7f14d3f56368e7c51c6f 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 427 35.685 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL549_RS16635 905f477f972b7f14d3f56368e7c51c6f 428 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 28-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL549_RS16635 905f477f972b7f14d3f56368e7c51c6f 428 Gene3D G3DSA:3.65.10.10 228 426 8.9E-69 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL549_RS16635 905f477f972b7f14d3f56368e7c51c6f 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 4.7E-158 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL549_RS16635 905f477f972b7f14d3f56368e7c51c6f 428 PIRSF PIRSF000505 1 427 1.6E-157 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL549_RS16635 905f477f972b7f14d3f56368e7c51c6f 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 1.1E-144 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL549_RS16635 905f477f972b7f14d3f56368e7c51c6f 428 Gene3D G3DSA:3.65.10.10 21 227 4.1E-64 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL549_RS16635 905f477f972b7f14d3f56368e7c51c6f 428 SUPERFAMILY SSF55205 1 424 3.92E-146 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AL549_RS09910 4adea33715ebe90f87a9c8bce4ee6623 263 Pfam PF12697 Alpha/beta hydrolase family 20 251 3.1E-15 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS09910 4adea33715ebe90f87a9c8bce4ee6623 263 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 6 258 33.696 T 28-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 AL549_RS09910 4adea33715ebe90f87a9c8bce4ee6623 263 Gene3D G3DSA:3.40.50.1820 4 259 3.2E-39 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS09910 4adea33715ebe90f87a9c8bce4ee6623 263 SUPERFAMILY SSF53474 13 259 3.78E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS09910 4adea33715ebe90f87a9c8bce4ee6623 263 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 17 258 1.9E-83 T 28-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 AL549_RS04450 926e1ba6d7f04726b59e1c5d2b695ca3 241 Pfam PF03591 AzlC protein 29 167 1.9E-34 T 28-03-2018 IPR011606 Branched-chain amino acid transport, permease AL549_RS06885 644de23c26ae6f65f2c40303f0d6749b 358 Gene3D G3DSA:3.40.640.10 29 259 1.7E-20 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS06885 644de23c26ae6f65f2c40303f0d6749b 358 Pfam PF01212 Beta-eliminating lyase 27 292 5.0E-32 T 28-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AL549_RS06885 644de23c26ae6f65f2c40303f0d6749b 358 SUPERFAMILY SSF53383 27 347 1.04E-72 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS03395 03cf80ea770c6b4b99a9e25bf72be99d 423 SUPERFAMILY SSF56935 51 423 3.02E-66 T 28-03-2018 AL549_RS03395 03cf80ea770c6b4b99a9e25bf72be99d 423 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 43 421 4.0E-48 T 28-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL549_RS03395 03cf80ea770c6b4b99a9e25bf72be99d 423 Gene3D G3DSA:2.40.160.40 56 381 3.4E-53 T 28-03-2018 AL549_RS12475 fed01a7daff95837839155af710a6374 405 SUPERFAMILY SSF109604 131 278 2.79E-8 T 28-03-2018 AL549_RS12475 fed01a7daff95837839155af710a6374 405 Pfam PF08668 HDOD domain 137 280 1.3E-5 T 28-03-2018 IPR013976 Metal-dependent hydrolase HDOD AL549_RS12475 fed01a7daff95837839155af710a6374 405 Gene3D G3DSA:1.10.3210.10 95 337 5.6E-8 T 28-03-2018 AL549_RS04630 841d379c2763e902bb711fbc418dd3a6 302 Pfam PF00248 Aldo/keto reductase family 16 291 5.8E-59 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL549_RS04630 841d379c2763e902bb711fbc418dd3a6 302 Gene3D G3DSA:3.20.20.100 2 302 7.6E-62 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL549_RS04630 841d379c2763e902bb711fbc418dd3a6 302 PRINTS PR00069 Aldo-keto reductase signature 145 162 2.9E-6 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL549_RS04630 841d379c2763e902bb711fbc418dd3a6 302 PRINTS PR00069 Aldo-keto reductase signature 114 132 2.9E-6 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL549_RS04630 841d379c2763e902bb711fbc418dd3a6 302 SUPERFAMILY SSF51430 5 299 7.99E-69 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL549_RS19660 b5c6a0aa5e4d29fdafbba2b6dea924a3 331 Pfam PF01435 Peptidase family M48 159 330 2.2E-26 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL549_RS19660 b5c6a0aa5e4d29fdafbba2b6dea924a3 331 Gene3D G3DSA:3.30.2010.10 146 238 1.7E-14 T 28-03-2018 AL549_RS05705 01b56923edc33ef40ab7a1ace7cbb668 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 1.1E-38 T 28-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AL549_RS05705 01b56923edc33ef40ab7a1ace7cbb668 103 Pfam PF01253 Translation initiation factor SUI1 27 96 1.9E-19 T 28-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AL549_RS05705 01b56923edc33ef40ab7a1ace7cbb668 103 PIRSF PIRSF037511 1 103 5.2E-33 T 28-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AL549_RS05705 01b56923edc33ef40ab7a1ace7cbb668 103 Gene3D G3DSA:3.30.780.10 11 101 2.5E-20 T 28-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AL549_RS05705 01b56923edc33ef40ab7a1ace7cbb668 103 SUPERFAMILY SSF55159 3 99 4.84E-27 T 28-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AL549_RS02900 25f911e4998d3c6f00decc38a1345e52 300 Pfam PF01841 Transglutaminase-like superfamily 93 152 4.2E-9 T 28-03-2018 IPR002931 Transglutaminase-like AL549_RS02900 25f911e4998d3c6f00decc38a1345e52 300 Gene3D G3DSA:3.90.260.10 77 197 0.0019 T 28-03-2018 IPR002931 Transglutaminase-like AL549_RS02900 25f911e4998d3c6f00decc38a1345e52 300 SUPERFAMILY SSF54001 59 255 6.17E-29 T 28-03-2018 AL549_RS11865 c21061b083d5ffe7043c0e01505c3a75 235 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 232 7.5E-36 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AL549_RS11865 c21061b083d5ffe7043c0e01505c3a75 235 Gene3D G3DSA:3.20.20.190 1 235 8.6E-63 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AL549_RS11865 c21061b083d5ffe7043c0e01505c3a75 235 SUPERFAMILY SSF51695 3 234 1.74E-64 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AL549_RS15405 ad66b67a5dfde7b4a7973f184b73f11e 229 Gene3D G3DSA:3.40.1550.10 4 174 2.2E-27 T 28-03-2018 IPR028976 CheC-like domain AL549_RS15405 ad66b67a5dfde7b4a7973f184b73f11e 229 SUPERFAMILY SSF103039 10 173 2.09E-24 T 28-03-2018 IPR028976 CheC-like domain AL549_RS15405 ad66b67a5dfde7b4a7973f184b73f11e 229 Pfam PF11813 Protein of unknown function (DUF3334) 4 229 5.6E-116 T 28-03-2018 IPR024513 Protein of unknown function DUF3334 AL549_RS15325 3096f004f39c2999d9c627673ef71c54 320 SUPERFAMILY SSF56349 214 315 2.18E-47 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL549_RS15325 3096f004f39c2999d9c627673ef71c54 320 SUPERFAMILY SSF56349 100 185 2.18E-47 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL549_RS15325 3096f004f39c2999d9c627673ef71c54 320 TIGRFAM TIGR02249 integrase_gron: integron integrase 5 320 1.4E-143 T 28-03-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 AL549_RS15325 3096f004f39c2999d9c627673ef71c54 320 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 8 87 1.5E-22 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AL549_RS15325 3096f004f39c2999d9c627673ef71c54 320 Gene3D G3DSA:1.10.150.130 1 94 3.3E-12 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AL549_RS15325 3096f004f39c2999d9c627673ef71c54 320 Gene3D G3DSA:1.10.443.10 101 309 6.1E-47 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL549_RS15325 3096f004f39c2999d9c627673ef71c54 320 Pfam PF00589 Phage integrase family 105 306 2.2E-45 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL549_RS15090 5b5d0cbb3810b230522230b99540c5da 51 Pfam PF11665 Protein of unknown function (DUF3265) 14 41 2.6E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS04540 28ddd04556aa730f19ed6b91ea9910fe 202 SUPERFAMILY SSF49503 57 169 3.48E-15 T 28-03-2018 IPR008972 Cupredoxin AL549_RS04540 28ddd04556aa730f19ed6b91ea9910fe 202 Gene3D G3DSA:2.60.40.10 20 193 1.0E-10 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS15965 208c2adffdf3ea05c5459e22f2f1ffdd 451 SUPERFAMILY SSF55874 291 438 1.83E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS15965 208c2adffdf3ea05c5459e22f2f1ffdd 451 SUPERFAMILY SSF51206 3 133 1.09E-15 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AL549_RS15965 208c2adffdf3ea05c5459e22f2f1ffdd 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 439 2.3E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS15965 208c2adffdf3ea05c5459e22f2f1ffdd 451 SMART SM00100 2 124 3.2E-4 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL549_RS15965 208c2adffdf3ea05c5459e22f2f1ffdd 451 SMART SM00387 329 440 7.3E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS15965 208c2adffdf3ea05c5459e22f2f1ffdd 451 Gene3D G3DSA:3.30.565.10 290 450 3.8E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS15965 208c2adffdf3ea05c5459e22f2f1ffdd 451 Pfam PF00027 Cyclic nucleotide-binding domain 22 100 4.2E-9 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL549_RS15965 208c2adffdf3ea05c5459e22f2f1ffdd 451 Gene3D G3DSA:2.60.120.10 8 143 3.7E-14 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS15965 208c2adffdf3ea05c5459e22f2f1ffdd 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 2.4E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS15965 208c2adffdf3ea05c5459e22f2f1ffdd 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 2.4E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS15965 208c2adffdf3ea05c5459e22f2f1ffdd 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 2.4E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS15965 208c2adffdf3ea05c5459e22f2f1ffdd 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 2.4E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS03690 3f9fa97d59efa8b2bd4a0bb56ec3ef44 222 SUPERFAMILY SSF161098 9 202 8.76E-32 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS03690 3f9fa97d59efa8b2bd4a0bb56ec3ef44 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 112 3.7E-16 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL549_RS03690 3f9fa97d59efa8b2bd4a0bb56ec3ef44 222 Gene3D G3DSA:1.10.3720.10 4 220 5.5E-31 T 28-03-2018 AL549_RS03690 3f9fa97d59efa8b2bd4a0bb56ec3ef44 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 215 1.5E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS10020 aa8abe897384cbf76cde90a42e3032b9 141 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 32 134 4.1E-40 T 28-03-2018 AL549_RS05780 2a4984dddc493accba0b6f94789d6c7c 200 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 26 183 3.8E-22 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL549_RS05780 2a4984dddc493accba0b6f94789d6c7c 200 Gene3D G3DSA:3.40.50.1110 19 200 3.7E-37 T 28-03-2018 AL549_RS05780 2a4984dddc493accba0b6f94789d6c7c 200 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 23 33 - T 28-03-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 AL549_RS05780 2a4984dddc493accba0b6f94789d6c7c 200 SUPERFAMILY SSF52266 22 199 3.21E-50 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL549_RS21210 7cb944d5691c78f67aecc6e10398e1f4 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 189 1.4E-30 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL549_RS21210 7cb944d5691c78f67aecc6e10398e1f4 197 Pfam PF01914 MarC family integral membrane protein 3 192 1.3E-54 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL549_RS07290 adc40409fa79d35235eb05ec3feff529 176 Gene3D G3DSA:2.30.110.10 9 174 1.4E-26 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL549_RS07290 adc40409fa79d35235eb05ec3feff529 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 4 171 3.4E-89 T 28-03-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain AL549_RS07290 adc40409fa79d35235eb05ec3feff529 176 SUPERFAMILY SSF50475 12 162 6.55E-34 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL549_RS07290 adc40409fa79d35235eb05ec3feff529 176 PIRSF PIRSF004633 1 176 6.6E-80 T 28-03-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain AL549_RS07290 adc40409fa79d35235eb05ec3feff529 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 14 105 5.5E-19 T 28-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL549_RS01830 109f9cd399828ba6b4b8a705473b8e5d 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 24.085 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL549_RS01830 109f9cd399828ba6b4b8a705473b8e5d 408 Pfam PF03616 Sodium/glutamate symporter 10 376 9.6E-148 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL549_RS01830 109f9cd399828ba6b4b8a705473b8e5d 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 11 407 1.6E-137 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL549_RS16545 dd49bc9b641472ca08f95deae8d77348 357 SMART SM00342 263 345 1.9E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS16545 dd49bc9b641472ca08f95deae8d77348 357 Pfam PF12833 Helix-turn-helix domain 269 347 3.0E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL549_RS16545 dd49bc9b641472ca08f95deae8d77348 357 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 329 1.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS16545 dd49bc9b641472ca08f95deae8d77348 357 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 329 345 1.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL549_RS16545 dd49bc9b641472ca08f95deae8d77348 357 Gene3D G3DSA:1.10.10.10 247 294 3.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS16545 dd49bc9b641472ca08f95deae8d77348 357 SUPERFAMILY SSF46689 298 349 1.07E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS16545 dd49bc9b641472ca08f95deae8d77348 357 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 39 220 1.7E-34 T 28-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AL549_RS16545 dd49bc9b641472ca08f95deae8d77348 357 Gene3D G3DSA:1.10.10.60 295 348 3.2E-13 T 28-03-2018 AL549_RS11435 a465a6db558688354d747eb3abfd5a72 542 Pfam PF08811 Protein of unknown function (DUF1800) 44 535 4.5E-98 T 28-03-2018 IPR014917 Protein of unknown function DUF1800 AL549_RS00490 41a3bafa4d4579d2e60a61d31cb39044 171 PRINTS PR01171 Bacterial lipocalin signature 29 43 1.6E-35 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL549_RS00490 41a3bafa4d4579d2e60a61d31cb39044 171 PRINTS PR01171 Bacterial lipocalin signature 99 113 1.6E-35 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL549_RS00490 41a3bafa4d4579d2e60a61d31cb39044 171 PRINTS PR01171 Bacterial lipocalin signature 159 169 1.6E-35 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL549_RS00490 41a3bafa4d4579d2e60a61d31cb39044 171 PRINTS PR01171 Bacterial lipocalin signature 46 62 1.6E-35 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL549_RS00490 41a3bafa4d4579d2e60a61d31cb39044 171 PRINTS PR01171 Bacterial lipocalin signature 132 143 1.6E-35 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL549_RS00490 41a3bafa4d4579d2e60a61d31cb39044 171 PRINTS PR01171 Bacterial lipocalin signature 65 74 1.6E-35 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL549_RS00490 41a3bafa4d4579d2e60a61d31cb39044 171 ProSitePatterns PS00213 Lipocalin signature. 28 41 - T 28-03-2018 IPR022272 Lipocalin family conserved site AL549_RS00490 41a3bafa4d4579d2e60a61d31cb39044 171 Gene3D G3DSA:2.40.128.20 2 171 1.3E-44 T 28-03-2018 IPR012674 Calycin AL549_RS00490 41a3bafa4d4579d2e60a61d31cb39044 171 SUPERFAMILY SSF50814 4 170 8.42E-53 T 28-03-2018 IPR012674 Calycin AL549_RS00490 41a3bafa4d4579d2e60a61d31cb39044 171 PIRSF PIRSF036893 1 171 1.3E-45 T 28-03-2018 IPR022271 Lipocalin, ApoD type AL549_RS00490 41a3bafa4d4579d2e60a61d31cb39044 171 Pfam PF08212 Lipocalin-like domain 30 170 3.9E-42 T 28-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AL549_RS08410 40163780733aac00918b142ac4cdfc9e 579 Gene3D G3DSA:3.40.630.30 310 471 7.9E-21 T 28-03-2018 AL549_RS08410 40163780733aac00918b142ac4cdfc9e 579 SUPERFAMILY SSF55729 312 458 9.0E-20 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS08410 40163780733aac00918b142ac4cdfc9e 579 Pfam PF13444 Acetyltransferase (GNAT) domain 329 430 1.2E-19 T 28-03-2018 AL549_RS08410 40163780733aac00918b142ac4cdfc9e 579 SMART SM00563 74 197 1.3E-9 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS08410 40163780733aac00918b142ac4cdfc9e 579 SUPERFAMILY SSF69593 42 252 2.09E-12 T 28-03-2018 AL549_RS08410 40163780733aac00918b142ac4cdfc9e 579 Gene3D G3DSA:3.40.1130.10 33 262 3.2E-26 T 28-03-2018 AL549_RS08410 40163780733aac00918b142ac4cdfc9e 579 Pfam PF01553 Acyltransferase 66 194 5.9E-6 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS23740 3a4d7bc34e12da543dde669858464617 147 Pfam PF09424 Yqey-like protein 5 146 7.0E-58 T 28-03-2018 IPR019004 Uncharacterised domain YOR215C, mitochondrial AL549_RS23740 3a4d7bc34e12da543dde669858464617 147 SUPERFAMILY SSF89095 1 146 5.23E-44 T 28-03-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 AL549_RS23740 3a4d7bc34e12da543dde669858464617 147 Gene3D G3DSA:1.10.1510.10 1 90 8.7E-31 T 28-03-2018 AL549_RS23740 3a4d7bc34e12da543dde669858464617 147 Gene3D G3DSA:1.10.10.410 91 147 3.9E-19 T 28-03-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AL549_RS15395 b26329bc5dc3c7fdf62ade55f1812b40 153 Pfam PF04191 Phospholipid methyltransferase 38 142 5.7E-13 T 28-03-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 AL549_RS15395 b26329bc5dc3c7fdf62ade55f1812b40 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 108 153 5.0E-21 T 28-03-2018 AL549_RS02030 1545c7767a2603d30c13979b15e0a8f9 557 Pfam PF03961 Flagellar Assembly Protein A 81 544 5.3E-125 T 28-03-2018 IPR005646 Flagellar assembly protein A AL549_RS02030 1545c7767a2603d30c13979b15e0a8f9 557 Gene3D G3DSA:2.160.20.70 259 389 2.1E-8 T 28-03-2018 AL549_RS05335 e99c8e68070853f8b0c159dbbbf779c8 225 Gene3D G3DSA:3.40.50.150 1 169 4.7E-14 T 28-03-2018 AL549_RS05335 e99c8e68070853f8b0c159dbbbf779c8 225 Pfam PF12847 Methyltransferase domain 3 159 1.0E-27 T 28-03-2018 AL549_RS05335 e99c8e68070853f8b0c159dbbbf779c8 225 SUPERFAMILY SSF53335 7 104 6.29E-10 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS05335 e99c8e68070853f8b0c159dbbbf779c8 225 PIRSF PIRSF028234 1 225 1.1E-120 T 28-03-2018 IPR016876 Uncharacterised conserved protein UCP028234 AL549_RS05850 85f6dc40ab9c9a6569d41ddb4865040f 144 Pfam PF03061 Thioesterase superfamily 52 128 1.7E-14 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL549_RS05850 85f6dc40ab9c9a6569d41ddb4865040f 144 SUPERFAMILY SSF54637 1 138 3.32E-29 T 28-03-2018 IPR029069 HotDog domain AL549_RS05850 85f6dc40ab9c9a6569d41ddb4865040f 144 Gene3D G3DSA:3.10.129.10 1 143 2.9E-24 T 28-03-2018 AL549_RS05850 85f6dc40ab9c9a6569d41ddb4865040f 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 135 2.6E-37 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AL549_RS16415 e9a2e27929d9f2e202c6d1d79d1f7bd8 346 Gene3D G3DSA:1.10.287.70 20 109 4.6E-13 T 28-03-2018 AL549_RS16415 e9a2e27929d9f2e202c6d1d79d1f7bd8 346 Pfam PF07885 Ion channel 26 103 1.6E-13 T 28-03-2018 IPR013099 Potassium channel domain AL549_RS16415 e9a2e27929d9f2e202c6d1d79d1f7bd8 346 SUPERFAMILY SSF51735 121 240 3.64E-11 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS16415 e9a2e27929d9f2e202c6d1d79d1f7bd8 346 SUPERFAMILY SSF81324 3 132 8.37E-19 T 28-03-2018 AL549_RS16415 e9a2e27929d9f2e202c6d1d79d1f7bd8 346 Gene3D G3DSA:3.40.50.720 112 237 4.9E-11 T 28-03-2018 AL549_RS11030 1c29d00bd65fda9a2f9dd4e71fe20722 139 SUPERFAMILY SSF54427 8 125 8.07E-23 T 28-03-2018 IPR032710 NTF2-like domain AL549_RS11030 1c29d00bd65fda9a2f9dd4e71fe20722 139 Pfam PF12680 SnoaL-like domain 8 108 1.4E-13 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL549_RS11030 1c29d00bd65fda9a2f9dd4e71fe20722 139 Gene3D G3DSA:3.10.450.50 6 121 5.3E-21 T 28-03-2018 AL549_RS05885 e4a7ed4f9698892407ce054b4a09c2b2 377 SUPERFAMILY SSF54909 2 57 2.82E-10 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL549_RS05885 e4a7ed4f9698892407ce054b4a09c2b2 377 Gene3D G3DSA:3.40.800.10 75 375 9.6E-61 T 28-03-2018 AL549_RS05885 e4a7ed4f9698892407ce054b4a09c2b2 377 PRINTS PR00116 Arginase signature 173 188 1.7E-21 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL549_RS05885 e4a7ed4f9698892407ce054b4a09c2b2 377 PRINTS PR00116 Arginase signature 201 228 1.7E-21 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL549_RS05885 e4a7ed4f9698892407ce054b4a09c2b2 377 PRINTS PR00116 Arginase signature 251 269 1.7E-21 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL549_RS05885 e4a7ed4f9698892407ce054b4a09c2b2 377 PRINTS PR00116 Arginase signature 300 329 1.7E-21 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL549_RS05885 e4a7ed4f9698892407ce054b4a09c2b2 377 Pfam PF00491 Arginase family 99 371 5.8E-54 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL549_RS05885 e4a7ed4f9698892407ce054b4a09c2b2 377 PIRSF PIRSF036979 51 373 1.1E-31 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AL549_RS05885 e4a7ed4f9698892407ce054b4a09c2b2 377 Gene3D G3DSA:3.30.70.100 1 56 3.8E-6 T 28-03-2018 AL549_RS05885 e4a7ed4f9698892407ce054b4a09c2b2 377 SUPERFAMILY SSF52768 111 375 2.34E-59 T 28-03-2018 AL549_RS12340 667ace218d61a1e71861c4570c0482c0 350 Pfam PF00793 DAHP synthetase I family 42 338 8.3E-99 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL549_RS12340 667ace218d61a1e71861c4570c0482c0 350 PIRSF PIRSF001361 2 350 1.8E-154 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL549_RS12340 667ace218d61a1e71861c4570c0482c0 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 4.8E-159 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL549_RS12340 667ace218d61a1e71861c4570c0482c0 350 SUPERFAMILY SSF51569 8 347 8.79E-129 T 28-03-2018 AL549_RS12340 667ace218d61a1e71861c4570c0482c0 350 Gene3D G3DSA:3.20.20.70 8 350 2.0E-121 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS08190 0db84054d3bf18f26d3310a9b2f83495 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 2.4E-15 T 28-03-2018 IPR003849 Preprotein translocase YajC AL549_RS08190 0db84054d3bf18f26d3310a9b2f83495 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 2.4E-15 T 28-03-2018 IPR003849 Preprotein translocase YajC AL549_RS08190 0db84054d3bf18f26d3310a9b2f83495 109 SMART SM01323 17 101 4.0E-39 T 28-03-2018 IPR003849 Preprotein translocase YajC AL549_RS08190 0db84054d3bf18f26d3310a9b2f83495 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 5.5E-30 T 28-03-2018 IPR003849 Preprotein translocase YajC AL549_RS08190 0db84054d3bf18f26d3310a9b2f83495 109 Pfam PF02699 Preprotein translocase subunit 21 98 5.7E-26 T 28-03-2018 IPR003849 Preprotein translocase YajC AL549_RS20010 75e800e15f87659e2e0dc87b77d2b72f 149 SUPERFAMILY SSF46785 11 144 2.9E-34 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS20010 75e800e15f87659e2e0dc87b77d2b72f 149 Pfam PF01475 Ferric uptake regulator family 20 138 4.5E-19 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AL549_RS20010 75e800e15f87659e2e0dc87b77d2b72f 149 Gene3D G3DSA:1.10.10.10 3 90 2.1E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00240 2b1ead22523c0b597721fb8442af57c3 547 SMART SM00283 278 546 3.1E-60 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS00240 2b1ead22523c0b597721fb8442af57c3 547 Gene3D G3DSA:1.10.287.1060 76 193 0.013 T 28-03-2018 AL549_RS00240 2b1ead22523c0b597721fb8442af57c3 547 Gene3D G3DSA:1.10.287.950 307 518 3.5E-48 T 28-03-2018 AL549_RS00240 2b1ead22523c0b597721fb8442af57c3 547 Gene3D G3DSA:1.10.287.950 217 306 0.001 T 28-03-2018 AL549_RS00240 2b1ead22523c0b597721fb8442af57c3 547 SUPERFAMILY SSF58104 238 547 2.75E-68 T 28-03-2018 AL549_RS00240 2b1ead22523c0b597721fb8442af57c3 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 353 512 5.3E-38 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS00240 2b1ead22523c0b597721fb8442af57c3 547 SMART SM00304 218 270 1.1E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS00240 2b1ead22523c0b597721fb8442af57c3 547 Pfam PF00672 HAMP domain 220 266 9.4E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS08260 52615d7582c13384a2cec9eaff1b3b4b 64 PIRSF PIRSF039003 1 64 1.1E-32 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL549_RS08260 52615d7582c13384a2cec9eaff1b3b4b 64 SUPERFAMILY SSF140319 1 63 7.59E-27 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL549_RS08260 52615d7582c13384a2cec9eaff1b3b4b 64 Pfam PF04384 Iron-sulphur cluster assembly 1 64 2.8E-32 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL549_RS08260 52615d7582c13384a2cec9eaff1b3b4b 64 Gene3D G3DSA:1.10.10.600 1 62 3.4E-32 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL549_RS08260 52615d7582c13384a2cec9eaff1b3b4b 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 63 2.4E-32 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL549_RS07190 78c519061930a1216c2b1bf33af7ee02 185 Gene3D G3DSA:3.40.630.30 3 182 4.2E-27 T 28-03-2018 AL549_RS07190 78c519061930a1216c2b1bf33af7ee02 185 SUPERFAMILY SSF55729 6 173 2.45E-38 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS07190 78c519061930a1216c2b1bf33af7ee02 185 Pfam PF13302 Acetyltransferase (GNAT) domain 29 149 1.7E-21 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS10850 0729dbaf3a0e38268fa2726ba542adf2 389 Gene3D G3DSA:1.25.40.10 56 108 2.8E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS10850 0729dbaf3a0e38268fa2726ba542adf2 389 Pfam PF13176 Tetratricopeptide repeat 71 94 0.02 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS10850 0729dbaf3a0e38268fa2726ba542adf2 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.755 T 28-03-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 AL549_RS10850 0729dbaf3a0e38268fa2726ba542adf2 389 Gene3D G3DSA:1.25.40.10 210 267 4.2E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS10850 0729dbaf3a0e38268fa2726ba542adf2 389 Gene3D G3DSA:1.20.960.10 20 55 0.25 T 28-03-2018 AL549_RS10850 0729dbaf3a0e38268fa2726ba542adf2 389 Gene3D G3DSA:1.25.40.10 109 209 6.9E-16 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS10850 0729dbaf3a0e38268fa2726ba542adf2 389 Pfam PF13181 Tetratricopeptide repeat 180 213 0.011 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS10850 0729dbaf3a0e38268fa2726ba542adf2 389 Pfam PF13181 Tetratricopeptide repeat 216 246 0.04 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS10850 0729dbaf3a0e38268fa2726ba542adf2 389 SMART SM00028 180 213 0.019 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS10850 0729dbaf3a0e38268fa2726ba542adf2 389 SMART SM00028 35 68 400.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS10850 0729dbaf3a0e38268fa2726ba542adf2 389 SMART SM00028 214 247 0.014 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS10850 0729dbaf3a0e38268fa2726ba542adf2 389 SMART SM00028 69 102 81.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS10850 0729dbaf3a0e38268fa2726ba542adf2 389 SUPERFAMILY SSF81901 39 274 7.85E-20 T 28-03-2018 AL549_RS10850 0729dbaf3a0e38268fa2726ba542adf2 389 Gene3D G3DSA:1.25.40.10 268 352 0.12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS05810 bbfd997e12846d2cf8c969ffc7936562 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 1.1E-15 T 28-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AL549_RS05810 bbfd997e12846d2cf8c969ffc7936562 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 96 6.5E-10 T 28-03-2018 IPR026992 Non-haem dioxygenase N-terminal domain AL549_RS05810 bbfd997e12846d2cf8c969ffc7936562 279 SUPERFAMILY SSF51197 7 276 5.77E-62 T 28-03-2018 AL549_RS05810 bbfd997e12846d2cf8c969ffc7936562 279 Gene3D G3DSA:2.60.120.330 1 279 8.1E-60 T 28-03-2018 IPR027443 Isopenicillin N synthase-like AL549_RS22835 2236540ef9fa3ff917a2e2725061dd4e 324 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 118 8.7E-20 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AL549_RS22835 2236540ef9fa3ff917a2e2725061dd4e 324 Gene3D G3DSA:3.30.360.10 140 320 2.6E-29 T 28-03-2018 AL549_RS22835 2236540ef9fa3ff917a2e2725061dd4e 324 Gene3D G3DSA:3.40.50.720 1 139 3.8E-29 T 28-03-2018 AL549_RS22835 2236540ef9fa3ff917a2e2725061dd4e 324 SUPERFAMILY SSF55347 126 294 2.4E-24 T 28-03-2018 AL549_RS22835 2236540ef9fa3ff917a2e2725061dd4e 324 SUPERFAMILY SSF51735 3 153 6.4E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS11920 d38d1e28a9b107a493079e2d74521ba2 219 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 41 142 2.7E-7 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AL549_RS11920 d38d1e28a9b107a493079e2d74521ba2 219 SUPERFAMILY SSF49354 34 141 5.23E-11 T 28-03-2018 IPR008962 PapD-like AL549_RS11920 d38d1e28a9b107a493079e2d74521ba2 219 Gene3D G3DSA:2.60.40.10 23 141 9.1E-18 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS17700 7e1275fb1b4b3a957144d8cff5994dca 204 SUPERFAMILY SSF52218 5 180 5.51E-51 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS17700 7e1275fb1b4b3a957144d8cff5994dca 204 Gene3D G3DSA:3.40.50.360 1 183 1.7E-38 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS17700 7e1275fb1b4b3a957144d8cff5994dca 204 Pfam PF02525 Flavodoxin-like fold 5 172 1.2E-45 T 28-03-2018 IPR003680 Flavodoxin-like fold AL549_RS00845 feead0692c3c054b0342b84a96ac32e1 211 SUPERFAMILY SSF51735 1 209 4.35E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS00845 feead0692c3c054b0342b84a96ac32e1 211 Pfam PF13460 NAD(P)H-binding 7 197 6.2E-31 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS00845 feead0692c3c054b0342b84a96ac32e1 211 Gene3D G3DSA:3.40.50.720 1 211 9.2E-27 T 28-03-2018 AL549_RS17540 104b1dc738109acf74d60f540f81b123 300 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 1.0E-84 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AL549_RS17540 104b1dc738109acf74d60f540f81b123 300 Pfam PF04261 Dyp-type peroxidase family 5 293 1.1E-88 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AL549_RS17540 104b1dc738109acf74d60f540f81b123 300 SUPERFAMILY SSF54909 1 296 1.18E-92 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL549_RS13260 037481102b8daaae040ee14c4b975d0c 52 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 7.7E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS00115 a847f5f7f8c959b18382b3dc3c631080 177 Pfam PF10531 SLBB domain 105 152 9.2E-16 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL549_RS00115 a847f5f7f8c959b18382b3dc3c631080 177 Gene3D G3DSA:3.10.560.10 95 174 1.6E-17 T 28-03-2018 AL549_RS00115 a847f5f7f8c959b18382b3dc3c631080 177 Gene3D G3DSA:3.30.1950.10 32 94 4.1E-17 T 28-03-2018 AL549_RS00115 a847f5f7f8c959b18382b3dc3c631080 177 Pfam PF02563 Polysaccharide biosynthesis/export protein 24 99 1.2E-19 T 28-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AL549_RS18430 55e964d1904c8098b3cea99934085a86 203 Pfam PF10144 Bacterial virulence factor haemolysin 7 151 2.2E-38 T 28-03-2018 IPR019305 Uncharacterised protein family Smp AL549_RS18430 55e964d1904c8098b3cea99934085a86 203 Gene3D G3DSA:3.30.450.20 33 122 6.8E-4 T 28-03-2018 AL549_RS11200 81df0e395ec063be28e5a8a199e5c20f 77 Pfam PF06146 Phosphate-starvation-inducible E 9 68 1.1E-9 T 28-03-2018 IPR020948 Phosphate-starvation-induced PsiE-like AL549_RS11200 81df0e395ec063be28e5a8a199e5c20f 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 2.8E-38 T 28-03-2018 IPR013468 Conserved hypothetical protein CHP02647 AL549_RS21985 c96162c835c9ac02fa81cb9ee576c43d 189 SUPERFAMILY SSF57783 16 64 5.1E-15 T 28-03-2018 AL549_RS21985 c96162c835c9ac02fa81cb9ee576c43d 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 67 103 4.4E-17 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL549_RS21985 c96162c835c9ac02fa81cb9ee576c43d 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 116 152 6.2E-16 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL549_RS21985 c96162c835c9ac02fa81cb9ee576c43d 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 22 57 3.5E-16 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL549_RS21985 c96162c835c9ac02fa81cb9ee576c43d 189 Gene3D G3DSA:3.30.65.10 107 152 1.2E-13 T 28-03-2018 AL549_RS21985 c96162c835c9ac02fa81cb9ee576c43d 189 Gene3D G3DSA:3.30.65.10 63 106 6.9E-17 T 28-03-2018 AL549_RS21985 c96162c835c9ac02fa81cb9ee576c43d 189 Gene3D G3DSA:3.30.65.10 11 62 6.4E-17 T 28-03-2018 AL549_RS21985 c96162c835c9ac02fa81cb9ee576c43d 189 Gene3D G3DSA:3.30.65.10 153 188 0.015 T 28-03-2018 AL549_RS21985 c96162c835c9ac02fa81cb9ee576c43d 189 SUPERFAMILY SSF57783 66 109 3.57E-14 T 28-03-2018 AL549_RS13535 8e1a1de05dca83b0ff5146c8885858c2 42 Pfam PF11665 Protein of unknown function (DUF3265) 10 36 3.5E-9 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS22630 b7175c14f998da5db6f124ae2bb03180 175 Pfam PF01618 MotA/TolQ/ExbB proton channel family 52 168 4.2E-20 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL549_RS01130 a02c7c4390f6ae4900b681a55d957277 299 SUPERFAMILY SSF103481 42 132 5.75E-6 T 28-03-2018 AL549_RS01130 a02c7c4390f6ae4900b681a55d957277 299 Pfam PF00892 EamA-like transporter family 141 280 1.0E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS01130 a02c7c4390f6ae4900b681a55d957277 299 Pfam PF00892 EamA-like transporter family 7 131 6.5E-9 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS01130 a02c7c4390f6ae4900b681a55d957277 299 SUPERFAMILY SSF103481 181 283 1.57E-9 T 28-03-2018 AL549_RS21100 36bd56d7435aa585d9dd56feef6e980d 227 Pfam PF01902 Diphthamide synthase 4 211 7.6E-22 T 28-03-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 AL549_RS21100 36bd56d7435aa585d9dd56feef6e980d 227 Gene3D G3DSA:3.90.1490.10 145 227 7.5E-13 T 28-03-2018 AL549_RS21100 36bd56d7435aa585d9dd56feef6e980d 227 SUPERFAMILY SSF52402 1 217 1.77E-55 T 28-03-2018 AL549_RS21100 36bd56d7435aa585d9dd56feef6e980d 227 Gene3D G3DSA:3.40.50.620 1 143 7.7E-20 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS13610 c98ae00822f843bb26fab7684757558a 43 Pfam PF11665 Protein of unknown function (DUF3265) 10 36 2.4E-6 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS23225 d3bd527a20b37999b9675fbbe24989fa 136 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 19 133 1.2E-53 T 28-03-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23225 d3bd527a20b37999b9675fbbe24989fa 136 Pfam PF00411 Ribosomal protein S11 26 135 1.9E-52 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AL549_RS23225 d3bd527a20b37999b9675fbbe24989fa 136 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 136 32.809 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AL549_RS23225 d3bd527a20b37999b9675fbbe24989fa 136 Gene3D G3DSA:3.30.420.80 8 136 3.1E-43 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AL549_RS23225 d3bd527a20b37999b9675fbbe24989fa 136 PIRSF PIRSF002131 3 136 2.4E-51 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AL549_RS23225 d3bd527a20b37999b9675fbbe24989fa 136 ProSitePatterns PS00054 Ribosomal protein S11 signature. 104 126 - T 28-03-2018 IPR018102 Ribosomal S11, conserved site AL549_RS23225 d3bd527a20b37999b9675fbbe24989fa 136 SUPERFAMILY SSF53137 25 136 1.47E-47 T 28-03-2018 AL549_RS10415 4d9c667fff3e8accf1297f5e7cfa44e9 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 2.0E-49 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL549_RS10415 4d9c667fff3e8accf1297f5e7cfa44e9 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.65 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL549_RS10415 4d9c667fff3e8accf1297f5e7cfa44e9 396 PIRSF PIRSF001413 1 396 5.0E-168 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL549_RS10415 4d9c667fff3e8accf1297f5e7cfa44e9 396 Gene3D G3DSA:3.40.50.1100 8 195 1.0E-44 T 28-03-2018 AL549_RS10415 4d9c667fff3e8accf1297f5e7cfa44e9 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 28-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL549_RS10415 4d9c667fff3e8accf1297f5e7cfa44e9 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 5.6E-194 T 28-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL549_RS10415 4d9c667fff3e8accf1297f5e7cfa44e9 396 Gene3D G3DSA:3.40.50.1100 196 396 4.6E-38 T 28-03-2018 AL549_RS10415 4d9c667fff3e8accf1297f5e7cfa44e9 396 SUPERFAMILY SSF53686 5 387 8.51E-142 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL549_RS09305 3126ba1c18763d06324863ba8e2ac167 116 Gene3D G3DSA:3.30.70.120 1 106 5.6E-18 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL549_RS09305 3126ba1c18763d06324863ba8e2ac167 116 SMART SM00938 6 104 1.0E-5 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL549_RS09305 3126ba1c18763d06324863ba8e2ac167 116 SUPERFAMILY SSF54913 1 102 9.45E-22 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL549_RS11515 6e3d0a1d6f8bb865d2a09473d5019b12 761 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 67 173 5.9E-15 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL549_RS11515 6e3d0a1d6f8bb865d2a09473d5019b12 761 SUPERFAMILY SSF56645 65 296 1.1E-45 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL549_RS11515 6e3d0a1d6f8bb865d2a09473d5019b12 761 Gene3D G3DSA:2.40.110.10 177 299 2.3E-18 T 28-03-2018 AL549_RS11515 6e3d0a1d6f8bb865d2a09473d5019b12 761 Gene3D G3DSA:1.10.540.10 16 176 2.0E-28 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL549_RS11515 6e3d0a1d6f8bb865d2a09473d5019b12 761 Gene3D G3DSA:1.20.140.10 301 449 6.0E-17 T 28-03-2018 AL549_RS11515 6e3d0a1d6f8bb865d2a09473d5019b12 761 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 1.0E-9 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL549_RS11515 6e3d0a1d6f8bb865d2a09473d5019b12 761 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 5.9E-110 T 28-03-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 AL549_RS11515 6e3d0a1d6f8bb865d2a09473d5019b12 761 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 1.6E-9 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL549_RS11515 6e3d0a1d6f8bb865d2a09473d5019b12 761 SUPERFAMILY SSF47203 301 453 3.54E-21 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL549_RS10325 60061c7410f13303b5d003be585b67ce 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 36.757 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 AL549_RS10325 60061c7410f13303b5d003be585b67ce 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 5.2E-39 T 28-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 AL549_RS10325 60061c7410f13303b5d003be585b67ce 329 Pfam PF04055 Radical SAM superfamily 19 181 5.3E-27 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS10325 60061c7410f13303b5d003be585b67ce 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 3.5E-105 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 AL549_RS10325 60061c7410f13303b5d003be585b67ce 329 SUPERFAMILY SSF102114 6 281 1.31E-69 T 28-03-2018 AL549_RS10325 60061c7410f13303b5d003be585b67ce 329 Gene3D G3DSA:3.20.20.70 1 329 1.2E-68 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS10325 60061c7410f13303b5d003be585b67ce 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 1.7E-9 T 28-03-2018 AL549_RS10325 60061c7410f13303b5d003be585b67ce 329 SMART SM00729 14 219 9.2E-5 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL549_RS08630 9cf2731766ea2f7d3e9b84e2465fea6a 218 SUPERFAMILY SSF63380 1 89 6.38E-25 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL549_RS08630 9cf2731766ea2f7d3e9b84e2465fea6a 218 Gene3D G3DSA:2.40.30.20 94 191 1.9E-33 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS08630 9cf2731766ea2f7d3e9b84e2465fea6a 218 Gene3D G3DSA:2.40.30.20 1 89 2.0E-25 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS08630 9cf2731766ea2f7d3e9b84e2465fea6a 218 SUPERFAMILY SSF63380 93 195 8.08E-32 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL549_RS08630 9cf2731766ea2f7d3e9b84e2465fea6a 218 PIRSF PIRSF000498 1 212 1.1E-79 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS08630 9cf2731766ea2f7d3e9b84e2465fea6a 218 Pfam PF00677 Lumazine binding domain 3 87 2.7E-20 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS08630 9cf2731766ea2f7d3e9b84e2465fea6a 218 Pfam PF00677 Lumazine binding domain 100 184 6.0E-24 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS08630 9cf2731766ea2f7d3e9b84e2465fea6a 218 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 199 1.6E-66 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL549_RS18435 0b7e64ad5c8f6d6630ba8921306e41ca 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 28-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL549_RS18435 0b7e64ad5c8f6d6630ba8921306e41ca 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.76 T 28-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL549_RS18435 0b7e64ad5c8f6d6630ba8921306e41ca 239 Gene3D G3DSA:3.40.50.1580 9 235 3.3E-54 T 28-03-2018 AL549_RS18435 0b7e64ad5c8f6d6630ba8921306e41ca 239 SUPERFAMILY SSF53167 3 234 5.11E-93 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL549_RS18435 0b7e64ad5c8f6d6630ba8921306e41ca 239 Pfam PF01048 Phosphorylase superfamily 15 220 1.8E-39 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL549_RS18435 0b7e64ad5c8f6d6630ba8921306e41ca 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 2.1E-120 T 28-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL549_RS18265 bda3e27c42f2c3ba1b267f7ef7e32682 150 Pfam PF04074 Domain of unknown function (DUF386) 3 140 1.0E-25 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family AL549_RS18265 bda3e27c42f2c3ba1b267f7ef7e32682 150 Gene3D G3DSA:2.60.120.370 1 143 1.7E-21 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family AL549_RS18265 bda3e27c42f2c3ba1b267f7ef7e32682 150 SUPERFAMILY SSF51197 1 143 4.94E-25 T 28-03-2018 AL549_RS11210 c36a40a7b9a665b33efd11ab5c307720 280 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 28-03-2018 IPR024002 Formate/nitrite transporter, conserved site AL549_RS11210 c36a40a7b9a665b33efd11ab5c307720 280 Pfam PF01226 Formate/nitrite transporter 14 275 2.9E-75 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AL549_RS11210 c36a40a7b9a665b33efd11ab5c307720 280 Gene3D G3DSA:1.20.1080.10 10 280 1.5E-79 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL549_RS11210 c36a40a7b9a665b33efd11ab5c307720 280 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 1.4E-79 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AL549_RS11210 c36a40a7b9a665b33efd11ab5c307720 280 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 278 8.7E-115 T 28-03-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 AL549_RS08880 3abeddae2116bc9bd4052ca45e9e06e2 370 SUPERFAMILY SSF52540 119 320 5.29E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS08880 3abeddae2116bc9bd4052ca45e9e06e2 370 Pfam PF02562 PhoH-like protein 120 323 7.2E-95 T 28-03-2018 IPR003714 PhoH-like protein GO:0005524 AL549_RS08880 3abeddae2116bc9bd4052ca45e9e06e2 370 Gene3D G3DSA:3.40.50.300 116 323 4.0E-27 T 28-03-2018 AL549_RS08695 a2901e523dedb364dc03ac13e5d3f8d8 208 Gene3D G3DSA:3.40.50.1820 3 203 8.8E-22 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS08695 a2901e523dedb364dc03ac13e5d3f8d8 208 SUPERFAMILY SSF53474 9 179 9.34E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS08695 a2901e523dedb364dc03ac13e5d3f8d8 208 Pfam PF12697 Alpha/beta hydrolase family 16 134 8.2E-7 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS13270 321463d8b07502331c2b8d3784292c6d 47 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 9.8E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS03055 5c020a5a652aa9c88a1171767665f62d 151 Gene3D G3DSA:3.40.630.30 3 151 1.5E-27 T 28-03-2018 AL549_RS03055 5c020a5a652aa9c88a1171767665f62d 151 SUPERFAMILY SSF55729 10 146 8.75E-27 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS03055 5c020a5a652aa9c88a1171767665f62d 151 Pfam PF00583 Acetyltransferase (GNAT) family 25 129 6.8E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS01310 41a53a6cc4288e7728ed89cee6a0e90a 565 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 409 423 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS01310 41a53a6cc4288e7728ed89cee6a0e90a 565 Gene3D G3DSA:3.30.2350.10 361 564 3.4E-59 T 28-03-2018 AL549_RS01310 41a53a6cc4288e7728ed89cee6a0e90a 565 Pfam PF00849 RNA pseudouridylate synthase 371 518 8.4E-29 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS01310 41a53a6cc4288e7728ed89cee6a0e90a 565 SUPERFAMILY SSF55120 355 562 6.88E-59 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL549_RS17440 fc353ee4257e682610decd9a1771809b 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 1.5E-33 T 28-03-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AL549_RS17440 fc353ee4257e682610decd9a1771809b 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 6.6E-25 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL549_RS17440 fc353ee4257e682610decd9a1771809b 136 Gene3D G3DSA:2.30.330.10 41 136 4.0E-30 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL549_RS17440 fc353ee4257e682610decd9a1771809b 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 5.6E-28 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL549_RS17440 fc353ee4257e682610decd9a1771809b 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 5.6E-28 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL549_RS17440 fc353ee4257e682610decd9a1771809b 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 5.6E-28 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL549_RS17440 fc353ee4257e682610decd9a1771809b 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 5.6E-28 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL549_RS17440 fc353ee4257e682610decd9a1771809b 136 SUPERFAMILY SSF101801 54 134 7.32E-25 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL549_RS18565 b0efab3a0c141ef5c730bf3bb9c8cfba 131 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 3.0E-47 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL549_RS18565 b0efab3a0c141ef5c730bf3bb9c8cfba 131 Pfam PF02033 Ribosome-binding factor A 7 110 4.0E-30 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL549_RS18565 b0efab3a0c141ef5c730bf3bb9c8cfba 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 118 21.07 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL549_RS18565 b0efab3a0c141ef5c730bf3bb9c8cfba 131 Gene3D G3DSA:3.30.300.20 5 118 6.9E-33 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL549_RS18565 b0efab3a0c141ef5c730bf3bb9c8cfba 131 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 5.2E-35 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL549_RS18565 b0efab3a0c141ef5c730bf3bb9c8cfba 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 28-03-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AL549_RS18565 b0efab3a0c141ef5c730bf3bb9c8cfba 131 SUPERFAMILY SSF89919 2 105 1.31E-31 T 28-03-2018 IPR023799 Ribosome-binding factor A domain AL549_RS04120 31b48ba6d38f074aa71246a33ee78152 353 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 8 352 1.9E-148 T 28-03-2018 IPR019936 Mutatrotase, YjhT-like AL549_RS04120 31b48ba6d38f074aa71246a33ee78152 353 SUPERFAMILY SSF117281 28 137 2.22E-19 T 28-03-2018 AL549_RS04120 31b48ba6d38f074aa71246a33ee78152 353 SUPERFAMILY SSF117281 172 352 2.22E-19 T 28-03-2018 AL549_RS04120 31b48ba6d38f074aa71246a33ee78152 353 Gene3D G3DSA:2.120.10.80 3 150 3.5E-9 T 28-03-2018 IPR015915 Kelch-type beta propeller GO:0005515 AL549_RS04120 31b48ba6d38f074aa71246a33ee78152 353 Gene3D G3DSA:2.120.10.80 163 353 2.5E-13 T 28-03-2018 IPR015915 Kelch-type beta propeller GO:0005515 AL549_RS05025 7335814c51c2a79a9afee9783e5b530c 131 Gene3D G3DSA:3.30.1330.80 4 131 3.8E-29 T 28-03-2018 AL549_RS05025 7335814c51c2a79a9afee9783e5b530c 131 SUPERFAMILY SSF117856 3 130 4.19E-32 T 28-03-2018 AL549_RS05025 7335814c51c2a79a9afee9783e5b530c 131 Pfam PF03479 Domain of unknown function (DUF296) 6 109 2.8E-19 T 28-03-2018 IPR005175 PPC domain AL549_RS09540 d1ea496c88574fc95edcad6bdfbc603f 76 SUPERFAMILY SSF46785 1 58 1.91E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS09540 d1ea496c88574fc95edcad6bdfbc603f 76 Gene3D G3DSA:1.10.10.10 1 72 3.7E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS09540 d1ea496c88574fc95edcad6bdfbc603f 76 Pfam PF09012 FeoC like transcriptional regulator 2 54 2.7E-13 T 28-03-2018 IPR015102 Transcriptional regulator HTH-type, FeoC AL549_RS07235 d8803753c40b7cb538a9e06514e0d6c8 222 Pfam PF06912 Protein of unknown function (DUF1275) 13 208 4.7E-30 T 28-03-2018 IPR010699 Protein of unknown function DUF1275 AL549_RS10730 1292a7ea4b876f6082c22e8a2babbb36 267 Gene3D G3DSA:3.30.470.10 1 110 1.4E-25 T 28-03-2018 AL549_RS10730 1292a7ea4b876f6082c22e8a2babbb36 267 Pfam PF01063 Amino-transferase class IV 24 247 1.8E-40 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL549_RS10730 1292a7ea4b876f6082c22e8a2babbb36 267 Gene3D G3DSA:3.20.10.10 121 264 1.7E-30 T 28-03-2018 AL549_RS10730 1292a7ea4b876f6082c22e8a2babbb36 267 SUPERFAMILY SSF56752 1 260 1.57E-67 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL549_RS10730 1292a7ea4b876f6082c22e8a2babbb36 267 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 2.0E-107 T 28-03-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 AL549_RS10730 1292a7ea4b876f6082c22e8a2babbb36 267 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 28-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL549_RS01075 e0fd74566ccbc8072d0557f9e8003fb9 127 PIRSF PIRSF005610 1 121 1.4E-13 T 28-03-2018 IPR007360 Invasion gene expression up-regulator, SirB AL549_RS01075 e0fd74566ccbc8072d0557f9e8003fb9 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 4 123 9.6E-30 T 28-03-2018 IPR007360 Invasion gene expression up-regulator, SirB AL549_RS10615 f8188952715088f61c0b5dc8bebbd5af 639 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 620 1.6E-61 T 28-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AL549_RS10615 f8188952715088f61c0b5dc8bebbd5af 639 Pfam PF01578 Cytochrome C assembly protein 89 295 1.6E-41 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL549_RS10615 f8188952715088f61c0b5dc8bebbd5af 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 3.9E-70 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS10615 f8188952715088f61c0b5dc8bebbd5af 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 3.9E-70 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS10615 f8188952715088f61c0b5dc8bebbd5af 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 3.9E-70 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS10615 f8188952715088f61c0b5dc8bebbd5af 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 3.9E-70 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS10615 f8188952715088f61c0b5dc8bebbd5af 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 309 328 3.9E-70 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS10615 f8188952715088f61c0b5dc8bebbd5af 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 3.9E-70 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS10615 f8188952715088f61c0b5dc8bebbd5af 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 131 148 3.9E-70 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS10615 f8188952715088f61c0b5dc8bebbd5af 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 3.9E-70 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL549_RS08705 3e2983a56e0ac54f355b29798fab0be3 363 PIRSF PIRSF028774 1 362 4.1E-193 T 28-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AL549_RS08705 3e2983a56e0ac54f355b29798fab0be3 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 84.432 T 28-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AL549_RS08705 3e2983a56e0ac54f355b29798fab0be3 363 Gene3D G3DSA:3.40.50.150 178 359 2.5E-17 T 28-03-2018 AL549_RS08705 3e2983a56e0ac54f355b29798fab0be3 363 SUPERFAMILY SSF53335 186 281 2.22E-11 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS08705 3e2983a56e0ac54f355b29798fab0be3 363 Pfam PF01728 FtsJ-like methyltransferase 188 251 6.7E-6 T 28-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AL549_RS17775 02798cc8dbc833a415a95e541489006b 380 Pfam PF02684 Lipid-A-disaccharide synthetase 8 374 1.0E-129 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AL549_RS17775 02798cc8dbc833a415a95e541489006b 380 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 377 8.5E-145 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AL549_RS17775 02798cc8dbc833a415a95e541489006b 380 SUPERFAMILY SSF53756 7 380 7.99E-29 T 28-03-2018 AL549_RS17775 02798cc8dbc833a415a95e541489006b 380 Gene3D G3DSA:3.40.50.2000 172 365 2.4E-12 T 28-03-2018 AL549_RS17775 02798cc8dbc833a415a95e541489006b 380 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 5 379 41.843 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AL549_RS14770 100606988a3e7052b76a3e082234d917 61 Pfam PF11665 Protein of unknown function (DUF3265) 19 46 7.8E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS12980 f4b5e8876de204318ea9555ccefc7a9a 45 Pfam PF11665 Protein of unknown function (DUF3265) 14 41 2.1E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS03330 7e62b646fe1dfc70d53211b3cbb83f82 261 SUPERFAMILY SSF53850 22 257 1.09E-23 T 28-03-2018 AL549_RS03330 7e62b646fe1dfc70d53211b3cbb83f82 261 Gene3D G3DSA:3.40.190.10 140 219 1.6E-4 T 28-03-2018 AL549_RS03330 7e62b646fe1dfc70d53211b3cbb83f82 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 257 1.0E-10 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS03330 7e62b646fe1dfc70d53211b3cbb83f82 261 Gene3D G3DSA:3.40.190.10 16 112 5.9E-8 T 28-03-2018 AL549_RS19610 00c07a22a3bbed44d424c79aeff257a2 443 PIRSF PIRSF006351 4 434 1.2E-148 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AL549_RS19610 00c07a22a3bbed44d424c79aeff257a2 443 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 425 3.1E-114 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AL549_RS19610 00c07a22a3bbed44d424c79aeff257a2 443 Pfam PF02378 Phosphotransferase system, EIIC 32 351 5.8E-66 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL549_RS16645 6b1604f0554b0e8101f741189b3b075a 237 SUPERFAMILY SSF55729 4 232 4.24E-86 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS16645 6b1604f0554b0e8101f741189b3b075a 237 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 205 1.1E-65 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AL549_RS16645 6b1604f0554b0e8101f741189b3b075a 237 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 237 88.871 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AL549_RS16645 6b1604f0554b0e8101f741189b3b075a 237 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 36 221 6.5E-73 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AL549_RS10655 2896b1737bd659da4e68480866b95e44 247 SMART SM00062 22 245 0.0048 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS10655 2896b1737bd659da4e68480866b95e44 247 Gene3D G3DSA:3.40.190.10 132 247 7.6E-7 T 28-03-2018 AL549_RS10655 2896b1737bd659da4e68480866b95e44 247 Gene3D G3DSA:3.40.190.10 16 127 4.0E-14 T 28-03-2018 AL549_RS10655 2896b1737bd659da4e68480866b95e44 247 SUPERFAMILY SSF53850 25 242 3.69E-31 T 28-03-2018 AL549_RS10655 2896b1737bd659da4e68480866b95e44 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 242 1.6E-19 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS05695 9ba988834f3bcd28577b62217a9ae516 51 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 9.4E-26 T 28-03-2018 IPR005371 Uncharacterised protein family UPF0181 AL549_RS05695 9ba988834f3bcd28577b62217a9ae516 51 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 51 4.0E-12 T 28-03-2018 IPR005371 Uncharacterised protein family UPF0181 AL549_RS05695 9ba988834f3bcd28577b62217a9ae516 51 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 51 19.152 T 28-03-2018 IPR005371 Uncharacterised protein family UPF0181 AL549_RS21500 8acfa60711adcbafcc56a9eba84ab9da 908 Gene3D G3DSA:3.40.190.10 1 274 8.4E-6 T 28-03-2018 AL549_RS21500 8acfa60711adcbafcc56a9eba84ab9da 908 Gene3D G3DSA:2.60.120.380 683 817 5.3E-4 T 28-03-2018 AL549_RS03710 8fbc416bcf94e7dad723e50074623fa0 168 Pfam PF04170 NlpE N-terminal domain 74 158 1.6E-32 T 28-03-2018 IPR007298 Copper resistance lipoprotein NlpE AL549_RS05200 f90890129a15038ea17c12e1754a083d 465 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 49 456 1.2E-26 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS05200 f90890129a15038ea17c12e1754a083d 465 SUPERFAMILY SSF56219 182 226 1.03E-13 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS05200 f90890129a15038ea17c12e1754a083d 465 SUPERFAMILY SSF56219 92 143 1.03E-13 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS05200 f90890129a15038ea17c12e1754a083d 465 SUPERFAMILY SSF56219 264 461 1.03E-13 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS05200 f90890129a15038ea17c12e1754a083d 465 SUPERFAMILY SSF56219 43 59 1.03E-13 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS05200 f90890129a15038ea17c12e1754a083d 465 Gene3D G3DSA:3.60.10.10 39 465 7.2E-16 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS23355 d8001ba2a35ad85afdb27b3214ba2298 1251 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 915 1250 4.8E-62 T 28-03-2018 IPR007452 Translocation and assembly module TamB AL549_RS07710 a9e3221be882cf93b5adf8370c799773 154 PIRSF PIRSF028680 1 154 2.0E-77 T 28-03-2018 IPR016895 Uncharacterised conserved protein UCP028680 AL549_RS07710 a9e3221be882cf93b5adf8370c799773 154 Gene3D G3DSA:2.40.160.20 10 154 2.3E-7 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS13530 525f89fcc18a2869c5d42dba5f6a36f6 47 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 7.4E-18 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS10810 26ff9cb3f15a628d9dfdc5536073e536 467 Gene3D G3DSA:1.10.150.20 172 451 2.4E-4 T 28-03-2018 AL549_RS10810 26ff9cb3f15a628d9dfdc5536073e536 467 Pfam PF00817 impB/mucB/samB family 19 148 5.2E-6 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL549_RS10810 26ff9cb3f15a628d9dfdc5536073e536 467 SUPERFAMILY SSF56672 22 225 2.08E-26 T 28-03-2018 AL549_RS19005 39b9594bf4321e2120294227c1b0693d 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 1.0E-156 T 28-03-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AL549_RS19005 39b9594bf4321e2120294227c1b0693d 376 PIRSF PIRSF015658 1 376 6.1E-176 T 28-03-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AL549_RS19005 39b9594bf4321e2120294227c1b0693d 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 2.3E-169 T 28-03-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AL549_RS10870 778bd4546042f52c7be62a1aaed5cdeb 613 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 491 1.5E-63 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AL549_RS10870 778bd4546042f52c7be62a1aaed5cdeb 613 PIRSF PIRSF002741 3 572 6.9E-68 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL549_RS10870 778bd4546042f52c7be62a1aaed5cdeb 613 Gene3D G3DSA:3.90.76.10 82 173 2.0E-20 T 28-03-2018 AL549_RS10870 778bd4546042f52c7be62a1aaed5cdeb 613 SUPERFAMILY SSF53850 45 566 1.79E-95 T 28-03-2018 AL549_RS10870 778bd4546042f52c7be62a1aaed5cdeb 613 Gene3D G3DSA:3.10.105.10 340 546 6.1E-36 T 28-03-2018 AL549_RS10870 778bd4546042f52c7be62a1aaed5cdeb 613 Gene3D G3DSA:3.40.190.10 174 339 1.5E-17 T 28-03-2018 AL549_RS16285 0456ea3321441c83fcac9e98382bcc0d 587 SUPERFAMILY SSF52091 446 536 3.73E-13 T 28-03-2018 IPR002645 STAS domain AL549_RS16285 0456ea3321441c83fcac9e98382bcc0d 587 Gene3D G3DSA:3.30.750.24 421 555 5.3E-19 T 28-03-2018 IPR002645 STAS domain AL549_RS16285 0456ea3321441c83fcac9e98382bcc0d 587 Pfam PF00916 Sulfate permease family 24 383 1.1E-80 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AL549_RS16285 0456ea3321441c83fcac9e98382bcc0d 587 Pfam PF01740 STAS domain 447 539 1.6E-15 T 28-03-2018 IPR002645 STAS domain AL549_RS16385 b93f76bd06690f1a91a8fde2bcfaab72 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 2.0E-69 T 28-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AL549_RS16385 b93f76bd06690f1a91a8fde2bcfaab72 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 31.432 T 28-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AL549_RS16385 b93f76bd06690f1a91a8fde2bcfaab72 149 Pfam PF06610 L-alanine exporter 8 142 4.1E-68 T 28-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AL549_RS13755 8acd61c4c612786187c95b5b58ca7c00 49 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.9E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS09755 7b4f207e2d898cb79006460569c4e754 418 Pfam PF01494 FAD binding domain 6 164 2.2E-19 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AL549_RS09755 7b4f207e2d898cb79006460569c4e754 418 Gene3D G3DSA:3.30.9.10 185 329 2.4E-13 T 28-03-2018 AL549_RS09755 7b4f207e2d898cb79006460569c4e754 418 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 3.0E-7 T 28-03-2018 AL549_RS09755 7b4f207e2d898cb79006460569c4e754 418 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 3.0E-7 T 28-03-2018 AL549_RS09755 7b4f207e2d898cb79006460569c4e754 418 SUPERFAMILY SSF51905 285 380 1.61E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS09755 7b4f207e2d898cb79006460569c4e754 418 SUPERFAMILY SSF51905 4 175 1.61E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS09755 7b4f207e2d898cb79006460569c4e754 418 Gene3D G3DSA:3.50.50.60 1 184 6.3E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS13885 fb7b9b2d91ed4429a4ddcd52b61105b3 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 3.9E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS05415 772758111cb7100fe3fc1033020b362c 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 105 2.2E-39 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AL549_RS05415 772758111cb7100fe3fc1033020b362c 107 SUPERFAMILY SSF50022 2 106 1.19E-34 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL549_RS05415 772758111cb7100fe3fc1033020b362c 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 106 6.8E-36 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AL549_RS05415 772758111cb7100fe3fc1033020b362c 107 Gene3D G3DSA:2.102.10.10 2 107 6.0E-18 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL549_RS06540 1baf5decc8c5e7f6a21057e321ad2d83 198 SUPERFAMILY SSF103088 97 197 3.01E-20 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS06540 1baf5decc8c5e7f6a21057e321ad2d83 198 Pfam PF00691 OmpA family 99 191 4.3E-19 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS06540 1baf5decc8c5e7f6a21057e321ad2d83 198 Gene3D G3DSA:3.30.1330.60 32 198 9.1E-21 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS06540 1baf5decc8c5e7f6a21057e321ad2d83 198 PRINTS PR01021 OMPA domain signature 142 158 4.6E-8 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS06540 1baf5decc8c5e7f6a21057e321ad2d83 198 PRINTS PR01021 OMPA domain signature 127 142 4.6E-8 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS02480 275c7b093ebf57fa76041d3b21dc0999 834 Pfam PF00501 AMP-binding enzyme 12 403 6.2E-49 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL549_RS02480 275c7b093ebf57fa76041d3b21dc0999 834 Gene3D G3DSA:2.30.38.10 321 402 2.3E-10 T 28-03-2018 AL549_RS02480 275c7b093ebf57fa76041d3b21dc0999 834 Gene3D G3DSA:3.40.50.980 4 170 2.2E-16 T 28-03-2018 AL549_RS02480 275c7b093ebf57fa76041d3b21dc0999 834 Gene3D G3DSA:3.40.50.980 171 320 1.5E-26 T 28-03-2018 AL549_RS02480 275c7b093ebf57fa76041d3b21dc0999 834 SUPERFAMILY SSF103481 562 661 1.57E-9 T 28-03-2018 AL549_RS02480 275c7b093ebf57fa76041d3b21dc0999 834 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 28-03-2018 IPR020845 AMP-binding, conserved site AL549_RS02480 275c7b093ebf57fa76041d3b21dc0999 834 SUPERFAMILY SSF56801 5 497 2.62E-64 T 28-03-2018 AL549_RS02480 275c7b093ebf57fa76041d3b21dc0999 834 Gene3D G3DSA:3.30.300.30 405 502 2.6E-4 T 28-03-2018 AL549_RS02480 275c7b093ebf57fa76041d3b21dc0999 834 Pfam PF00892 EamA-like transporter family 674 810 1.4E-8 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS02480 275c7b093ebf57fa76041d3b21dc0999 834 Pfam PF00892 EamA-like transporter family 524 659 4.0E-20 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS02880 9d4b89392ab280b39779d0878b640ae6 101 SUPERFAMILY SSF101744 14 100 6.28E-24 T 28-03-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 AL549_RS02880 9d4b89392ab280b39779d0878b640ae6 101 Gene3D G3DSA:2.30.30.400 21 99 1.3E-25 T 28-03-2018 AL549_RS02880 9d4b89392ab280b39779d0878b640ae6 101 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 20 99 7.4E-29 T 28-03-2018 IPR009778 Modulator of Rho-dependent transcription termination AL549_RS02475 42c7c17c3398e3038ebd7ae6a24b92a3 465 Gene3D G3DSA:3.40.640.10 6 305 6.7E-17 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS02475 42c7c17c3398e3038ebd7ae6a24b92a3 465 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 54 325 2.8E-35 T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AL549_RS02475 42c7c17c3398e3038ebd7ae6a24b92a3 465 SUPERFAMILY SSF53383 52 407 2.18E-37 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS02475 42c7c17c3398e3038ebd7ae6a24b92a3 465 Gene3D G3DSA:3.90.1150.10 307 428 8.4E-11 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS07400 341404524b558e0b7b00831b6d9e6140 196 Gene3D G3DSA:3.40.50.1820 7 195 3.4E-20 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS07400 341404524b558e0b7b00831b6d9e6140 196 SUPERFAMILY SSF53474 5 194 5.69E-21 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS07400 341404524b558e0b7b00831b6d9e6140 196 Pfam PF05728 Uncharacterised protein family (UPF0227) 9 194 1.0E-69 T 28-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AL549_RS10270 dff030101bbaf8e50ffd0ae92dd5c123 230 PIRSF PIRSF006102 1 219 5.9E-79 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AL549_RS10270 dff030101bbaf8e50ffd0ae92dd5c123 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 208 7.8E-88 T 28-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 AL549_RS10270 dff030101bbaf8e50ffd0ae92dd5c123 230 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 28.186 T 28-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 AL549_RS10270 dff030101bbaf8e50ffd0ae92dd5c123 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 3.6E-66 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AL549_RS03320 3d621c29f919f1056b7f48e00f0fe85d 313 SUPERFAMILY SSF46785 6 88 2.27E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03320 3d621c29f919f1056b7f48e00f0fe85d 313 Gene3D G3DSA:3.40.190.10 100 187 1.4E-9 T 28-03-2018 AL549_RS03320 3d621c29f919f1056b7f48e00f0fe85d 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 8.9E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03320 3d621c29f919f1056b7f48e00f0fe85d 313 SUPERFAMILY SSF53850 93 302 7.96E-27 T 28-03-2018 AL549_RS03320 3d621c29f919f1056b7f48e00f0fe85d 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 8.9E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03320 3d621c29f919f1056b7f48e00f0fe85d 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 8.9E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03320 3d621c29f919f1056b7f48e00f0fe85d 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 8.9E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS03320 3d621c29f919f1056b7f48e00f0fe85d 313 Pfam PF03466 LysR substrate binding domain 99 302 2.1E-17 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS03320 3d621c29f919f1056b7f48e00f0fe85d 313 Gene3D G3DSA:1.10.10.10 1 92 5.7E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS03320 3d621c29f919f1056b7f48e00f0fe85d 313 Gene3D G3DSA:3.40.190.10 188 274 1.1E-8 T 28-03-2018 AL549_RS16685 297dfb079ed72551f5487482ba3a6dfc 201 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 196 1.8E-32 T 28-03-2018 IPR018635 Uncharacterised protein family UPF0319 AL549_RS11685 db072e4efa2eb626f0fcbaee9ba53abb 232 SUPERFAMILY SSF51735 7 227 4.9E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS11685 db072e4efa2eb626f0fcbaee9ba53abb 232 Pfam PF08732 HIM1 80 168 3.3E-10 T 28-03-2018 IPR014843 Protein Him1/Fmp52 AL549_RS11685 db072e4efa2eb626f0fcbaee9ba53abb 232 Gene3D G3DSA:3.40.50.720 4 232 1.0E-17 T 28-03-2018 AL549_RS23135 4a8e027edf593979c60b380a74d4b34d 110 SUPERFAMILY SSF54843 1 109 7.85E-45 T 28-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AL549_RS23135 4a8e027edf593979c60b380a74d4b34d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 28-03-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL549_RS23135 4a8e027edf593979c60b380a74d4b34d 110 Gene3D G3DSA:3.90.470.10 1 110 4.4E-46 T 28-03-2018 AL549_RS23135 4a8e027edf593979c60b380a74d4b34d 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 1.2E-39 T 28-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AL549_RS23135 4a8e027edf593979c60b380a74d4b34d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.662 T 28-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23135 4a8e027edf593979c60b380a74d4b34d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 2.0E-50 T 28-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS17290 c3e37a2e8deb84aeaa6736c699fc50ea 243 Pfam PF11859 Protein of unknown function (DUF3379) 1 239 8.3E-84 T 28-03-2018 IPR021806 Protein of unknown function DUF3379 AL549_RS17085 1582100946f01e9aa5629df1775c3e23 102 Gene3D G3DSA:1.10.3990.20 11 95 2.3E-28 T 28-03-2018 AL549_RS17085 1582100946f01e9aa5629df1775c3e23 102 Pfam PF13467 Ribbon-helix-helix domain 16 82 1.6E-23 T 28-03-2018 IPR027373 Ribbon-helix-helix domain AL549_RS18830 b00122cb6145dbc03299d29780d7eea1 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL549_RS18830 b00122cb6145dbc03299d29780d7eea1 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 6.9E-47 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL549_RS18830 b00122cb6145dbc03299d29780d7eea1 161 SUPERFAMILY SSF55083 1 157 1.24E-54 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL549_RS18830 b00122cb6145dbc03299d29780d7eea1 161 Gene3D G3DSA:3.30.70.560 1 155 3.7E-57 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL549_RS18830 b00122cb6145dbc03299d29780d7eea1 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 2.5E-37 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL549_RS20120 b6b756b90a224fbaa7085c811aecf7d3 837 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 768 2.8E-167 T 28-03-2018 AL549_RS20120 b6b756b90a224fbaa7085c811aecf7d3 837 Pfam PF00905 Penicillin binding protein transpeptidase domain 438 709 5.0E-26 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL549_RS20120 b6b756b90a224fbaa7085c811aecf7d3 837 SUPERFAMILY SSF53955 43 255 5.06E-77 T 28-03-2018 IPR023346 Lysozyme-like domain AL549_RS20120 b6b756b90a224fbaa7085c811aecf7d3 837 Gene3D G3DSA:3.40.710.10 425 785 8.7E-89 T 28-03-2018 AL549_RS20120 b6b756b90a224fbaa7085c811aecf7d3 837 Gene3D G3DSA:1.10.3810.10 47 246 2.5E-79 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AL549_RS20120 b6b756b90a224fbaa7085c811aecf7d3 837 Pfam PF17092 Penicillin-binding protein OB-like domain 317 435 4.7E-31 T 28-03-2018 IPR031376 Penicillin-binding protein, OB-like domain AL549_RS20120 b6b756b90a224fbaa7085c811aecf7d3 837 Pfam PF00912 Transglycosylase 55 229 5.9E-63 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AL549_RS20120 b6b756b90a224fbaa7085c811aecf7d3 837 SUPERFAMILY SSF56601 432 620 3.62E-116 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL549_RS20120 b6b756b90a224fbaa7085c811aecf7d3 837 SUPERFAMILY SSF56601 211 233 3.62E-116 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL549_RS20120 b6b756b90a224fbaa7085c811aecf7d3 837 SUPERFAMILY SSF56601 262 314 3.62E-116 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL549_RS20120 b6b756b90a224fbaa7085c811aecf7d3 837 SUPERFAMILY SSF56601 650 821 3.62E-116 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL549_RS20120 b6b756b90a224fbaa7085c811aecf7d3 837 Gene3D G3DSA:2.40.50.140 349 424 2.0E-24 T 28-03-2018 AL549_RS05455 ad171ccc7eece34103a0b6a3f757cb3c 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 1.5E-28 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AL549_RS21165 fa1af02b0aadf24d1a5bb4a1ecd22211 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 1.7E-19 T 28-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AL549_RS17755 8548da91ebe9920d4ba51b3a12eb7461 436 Pfam PF01171 PP-loop family 22 199 4.3E-59 T 28-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AL549_RS17755 8548da91ebe9920d4ba51b3a12eb7461 436 SMART SM00977 365 434 8.4E-23 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL549_RS17755 8548da91ebe9920d4ba51b3a12eb7461 436 SUPERFAMILY SSF82829 238 319 5.62E-22 T 28-03-2018 AL549_RS17755 8548da91ebe9920d4ba51b3a12eb7461 436 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 203 4.9E-55 T 28-03-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL549_RS17755 8548da91ebe9920d4ba51b3a12eb7461 436 Gene3D G3DSA:3.40.50.620 14 227 1.6E-41 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL549_RS17755 8548da91ebe9920d4ba51b3a12eb7461 436 Pfam PF11734 TilS substrate C-terminal domain 367 432 9.7E-23 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL549_RS17755 8548da91ebe9920d4ba51b3a12eb7461 436 SUPERFAMILY SSF52402 15 233 7.98E-62 T 28-03-2018 AL549_RS17755 8548da91ebe9920d4ba51b3a12eb7461 436 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 309 22.972 T 28-03-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL549_RS17755 8548da91ebe9920d4ba51b3a12eb7461 436 SUPERFAMILY SSF56037 323 435 9.15E-29 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AL549_RS17755 8548da91ebe9920d4ba51b3a12eb7461 436 Pfam PF09179 TilS substrate binding domain 248 315 3.9E-14 T 28-03-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL549_RS17755 8548da91ebe9920d4ba51b3a12eb7461 436 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 365 411 7.4E-18 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL549_RS06270 4edaa696fd573d319f3906814d2c69cb 327 SUPERFAMILY SSF52540 9 301 5.82E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06270 4edaa696fd573d319f3906814d2c69cb 327 Gene3D G3DSA:3.40.50.300 19 187 2.7E-28 T 28-03-2018 AL549_RS06270 4edaa696fd573d319f3906814d2c69cb 327 PIRSF PIRSF002849 1 327 2.5E-126 T 28-03-2018 AL549_RS06270 4edaa696fd573d319f3906814d2c69cb 327 Gene3D G3DSA:1.10.8.300 208 324 4.9E-32 T 28-03-2018 AL549_RS06270 4edaa696fd573d319f3906814d2c69cb 327 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 170 1.6E-62 T 28-03-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AL549_RS15700 e50713eeac52b7e6409e8df21eade1e9 966 SUPERFAMILY SSF49363 680 730 3.66E-7 T 28-03-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 AL549_RS15700 e50713eeac52b7e6409e8df21eade1e9 966 Pfam PF07603 Protein of unknown function (DUF1566) 847 941 1.1E-9 T 28-03-2018 IPR011460 Protein of unknown function DUF1566 AL549_RS15700 e50713eeac52b7e6409e8df21eade1e9 966 Gene3D G3DSA:3.40.190.10 1 409 1.1E-5 T 28-03-2018 AL549_RS15700 e50713eeac52b7e6409e8df21eade1e9 966 Gene3D G3DSA:2.60.40.10 649 740 6.2E-8 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS15700 e50713eeac52b7e6409e8df21eade1e9 966 ProSitePatterns PS00018 EF-hand calcium-binding domain. 456 468 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site AL549_RS09320 d30b5e63466b9387ab959d99e70fe8c6 92 Gene3D G3DSA:3.40.30.10 1 92 1.9E-40 T 28-03-2018 AL549_RS09320 d30b5e63466b9387ab959d99e70fe8c6 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 78 7.3E-24 T 28-03-2018 IPR011893 Selenoprotein, Rdx type AL549_RS09320 d30b5e63466b9387ab959d99e70fe8c6 92 SUPERFAMILY SSF52833 4 87 3.35E-30 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS09320 d30b5e63466b9387ab959d99e70fe8c6 92 Pfam PF10262 Rdx family 5 78 2.2E-33 T 28-03-2018 IPR011893 Selenoprotein, Rdx type AL549_RS03685 c01204c7fc8833ac6571aea90dc45068 186 Gene3D G3DSA:2.30.110.10 4 133 1.2E-15 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL549_RS03685 c01204c7fc8833ac6571aea90dc45068 186 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 8 98 2.3E-7 T 28-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL549_RS03685 c01204c7fc8833ac6571aea90dc45068 186 SUPERFAMILY SSF50475 8 113 9.42E-11 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL549_RS06820 b2ec165afc74f2f4f2cc9ea95de385ee 423 Pfam PF02308 MgtC family 17 141 9.0E-19 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL549_RS06820 b2ec165afc74f2f4f2cc9ea95de385ee 423 Pfam PF13194 Domain of unknown function (DUF4010) 189 397 1.8E-64 T 28-03-2018 IPR025105 Domain of unknown function DUF4010 AL549_RS19120 71ba12ef9dfa9d6f1983eb2f1a4a2365 158 Gene3D G3DSA:3.30.1330.50 1 158 6.5E-72 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL549_RS19120 71ba12ef9dfa9d6f1983eb2f1a4a2365 158 SUPERFAMILY SSF69765 1 157 3.4E-65 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL549_RS19120 71ba12ef9dfa9d6f1983eb2f1a4a2365 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 28-03-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL549_RS19120 71ba12ef9dfa9d6f1983eb2f1a4a2365 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 36.281 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL549_RS19120 71ba12ef9dfa9d6f1983eb2f1a4a2365 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 2.0E-69 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL549_RS19120 71ba12ef9dfa9d6f1983eb2f1a4a2365 158 Pfam PF02542 YgbB family 2 155 1.1E-65 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL549_RS14860 f843d0494abdce0319218661e68d2d38 143 Pfam PF00293 NUDIX domain 15 83 7.4E-9 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL549_RS14860 f843d0494abdce0319218661e68d2d38 143 Gene3D G3DSA:3.90.79.10 2 125 1.5E-14 T 28-03-2018 AL549_RS14860 f843d0494abdce0319218661e68d2d38 143 SUPERFAMILY SSF55811 10 136 2.3E-15 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL549_RS17425 1688dba375e2077d4a5333347c3ce287 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.0E-17 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL549_RS17425 1688dba375e2077d4a5333347c3ce287 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.0E-17 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL549_RS17425 1688dba375e2077d4a5333347c3ce287 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.0E-17 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL549_RS17425 1688dba375e2077d4a5333347c3ce287 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 6.9E-33 T 28-03-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 AL549_RS17425 1688dba375e2077d4a5333347c3ce287 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.3E-28 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL549_RS17425 1688dba375e2077d4a5333347c3ce287 89 PIRSF PIRSF004669 1 89 2.3E-30 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL549_RS16160 cc539fd73a0c50517edf19b682df32f6 445 SUPERFAMILY SSF53098 94 377 9.86E-25 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS16160 cc539fd73a0c50517edf19b682df32f6 445 Pfam PF01609 Transposase DDE domain 129 356 4.6E-25 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL549_RS16160 cc539fd73a0c50517edf19b682df32f6 445 Pfam PF13006 Insertion element 4 transposase N-terminal 20 112 9.7E-29 T 28-03-2018 IPR024473 Transposase, IS4, N-terminal AL549_RS16160 cc539fd73a0c50517edf19b682df32f6 445 Gene3D G3DSA:3.90.350.10 193 336 1.2E-13 T 28-03-2018 IPR014736 Transposase, Tn5-like, core AL549_RS07760 8d26e3d09be375a87b03e54a19354f20 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.841 T 28-03-2018 IPR005583 Peroxide stress protein YaaA AL549_RS07760 8d26e3d09be375a87b03e54a19354f20 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 9.9E-94 T 28-03-2018 IPR005583 Peroxide stress protein YaaA AL549_RS08725 01139c82f7d2408a0407e76c293efc2a 521 SMART SM00267 351 521 2.7E-41 T 28-03-2018 IPR000160 GGDEF domain AL549_RS08725 01139c82f7d2408a0407e76c293efc2a 521 SUPERFAMILY SSF55073 366 518 4.08E-36 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS08725 01139c82f7d2408a0407e76c293efc2a 521 Gene3D G3DSA:3.30.70.270 353 520 6.4E-41 T 28-03-2018 AL549_RS08725 01139c82f7d2408a0407e76c293efc2a 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 518 6.2E-35 T 28-03-2018 IPR000160 GGDEF domain AL549_RS08725 01139c82f7d2408a0407e76c293efc2a 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 516 1.8E-36 T 28-03-2018 IPR000160 GGDEF domain AL549_RS12740 f9202a218c41b03b5c05d6ec2520e3d6 271 SMART SM01144 47 247 2.1E-63 T 28-03-2018 IPR005636 DTW AL549_RS12740 f9202a218c41b03b5c05d6ec2520e3d6 271 Pfam PF03942 DTW domain 50 241 3.7E-40 T 28-03-2018 IPR005636 DTW AL549_RS06135 e626cb9728847a6a7fc180e4fc23d2a2 954 Gene3D G3DSA:3.90.1150.10 768 899 5.6E-45 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS06135 e626cb9728847a6a7fc180e4fc23d2a2 954 Pfam PF02347 Glycine cleavage system P-protein 458 734 2.8E-8 T 28-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL549_RS06135 e626cb9728847a6a7fc180e4fc23d2a2 954 Pfam PF02347 Glycine cleavage system P-protein 17 438 1.0E-178 T 28-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL549_RS06135 e626cb9728847a6a7fc180e4fc23d2a2 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 946 0.0 T 28-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL549_RS06135 e626cb9728847a6a7fc180e4fc23d2a2 954 SUPERFAMILY SSF53383 17 438 1.67E-100 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS06135 e626cb9728847a6a7fc180e4fc23d2a2 954 Gene3D G3DSA:3.40.640.10 526 767 6.4E-35 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS06135 e626cb9728847a6a7fc180e4fc23d2a2 954 Gene3D G3DSA:3.90.1150.10 341 440 4.0E-26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS06135 e626cb9728847a6a7fc180e4fc23d2a2 954 Gene3D G3DSA:3.40.640.10 95 340 2.1E-28 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS06135 e626cb9728847a6a7fc180e4fc23d2a2 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.548 T 28-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL549_RS06135 e626cb9728847a6a7fc180e4fc23d2a2 954 SUPERFAMILY SSF53383 454 882 9.22E-99 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS06135 e626cb9728847a6a7fc180e4fc23d2a2 954 SUPERFAMILY SSF53383 925 947 9.22E-99 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS08840 035291730ce00cf67372066ae16a89bb 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 9.5E-28 T 28-03-2018 AL549_RS08840 035291730ce00cf67372066ae16a89bb 105 Gene3D G3DSA:3.30.460.10 1 105 5.0E-34 T 28-03-2018 AL549_RS08840 035291730ce00cf67372066ae16a89bb 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 1.3E-38 T 28-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AL549_RS08840 035291730ce00cf67372066ae16a89bb 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.159 T 28-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AL549_RS08840 035291730ce00cf67372066ae16a89bb 105 SUPERFAMILY SSF81301 5 105 3.43E-38 T 28-03-2018 AL549_RS22370 213745a07c56b13f840656b4479fbdc5 205 Gene3D G3DSA:1.10.760.10 13 104 4.5E-23 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS22370 213745a07c56b13f840656b4479fbdc5 205 Gene3D G3DSA:1.10.760.10 105 202 2.4E-23 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS22370 213745a07c56b13f840656b4479fbdc5 205 PIRSF PIRSF000005 1 205 4.8E-65 T 28-03-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 AL549_RS22370 213745a07c56b13f840656b4479fbdc5 205 SUPERFAMILY SSF46626 16 104 1.14E-20 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS22370 213745a07c56b13f840656b4479fbdc5 205 Pfam PF00034 Cytochrome c 117 201 7.5E-9 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS22370 213745a07c56b13f840656b4479fbdc5 205 Pfam PF00034 Cytochrome c 25 103 1.4E-10 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS22370 213745a07c56b13f840656b4479fbdc5 205 SUPERFAMILY SSF46626 114 203 6.06E-20 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS16650 2c14cd56c00c2e574e1a139fb3cb6aeb 232 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 232 35.34 T 28-03-2018 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic MetaCyc: PWY-7799 AL549_RS16650 2c14cd56c00c2e574e1a139fb3cb6aeb 232 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 107 225 5.9E-32 T 28-03-2018 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7799 AL549_RS16650 2c14cd56c00c2e574e1a139fb3cb6aeb 232 SUPERFAMILY SSF55729 80 231 9.8E-22 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS16650 2c14cd56c00c2e574e1a139fb3cb6aeb 232 Gene3D G3DSA:3.40.630.30 79 222 7.7E-8 T 28-03-2018 AL549_RS16650 2c14cd56c00c2e574e1a139fb3cb6aeb 232 PIRSF PIRSF037208 1 232 8.6E-84 T 28-03-2018 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic MetaCyc: PWY-7799 AL549_RS16650 2c14cd56c00c2e574e1a139fb3cb6aeb 232 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 5.2E-19 T 28-03-2018 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7799 AL549_RS02965 5596b3d86701308669128ab1c5f71f91 176 Pfam PF10973 Protein of unknown function (DUF2799) 29 110 1.9E-24 T 28-03-2018 IPR021242 Protein of unknown function DUF2799 AL549_RS13565 5d2f4bd03d85b46805b064931b794920 173 Pfam PF12158 Protein of unknown function (DUF3592) 10 163 6.7E-15 T 28-03-2018 IPR021994 Protein of unknown function DUF3592 AL549_RS20480 cc77328cc8dc9015a9d416c581a6e988 326 SUPERFAMILY SSF117892 56 142 1.57E-21 T 28-03-2018 IPR001107 Band 7 domain AL549_RS20480 cc77328cc8dc9015a9d416c581a6e988 326 SUPERFAMILY SSF117892 173 223 1.57E-21 T 28-03-2018 IPR001107 Band 7 domain AL549_RS20480 cc77328cc8dc9015a9d416c581a6e988 326 Pfam PF01145 SPFH domain / Band 7 family 22 233 1.0E-28 T 28-03-2018 IPR001107 Band 7 domain AL549_RS20480 cc77328cc8dc9015a9d416c581a6e988 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 5.9E-136 T 28-03-2018 IPR010200 HflC GO:0016021|GO:0052547 AL549_RS20480 cc77328cc8dc9015a9d416c581a6e988 326 PIRSF PIRSF005651 1 326 4.5E-95 T 28-03-2018 IPR010200 HflC GO:0016021|GO:0052547 AL549_RS20480 cc77328cc8dc9015a9d416c581a6e988 326 SMART SM00244 18 218 1.3E-45 T 28-03-2018 IPR001107 Band 7 domain AL549_RS02640 8bfdf27d6378900fbadb4c092dd1756b 435 Gene3D G3DSA:1.10.400.20 296 409 2.5E-41 T 28-03-2018 AL549_RS02640 8bfdf27d6378900fbadb4c092dd1756b 435 Gene3D G3DSA:3.20.20.70 5 295 2.6E-68 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS02640 8bfdf27d6378900fbadb4c092dd1756b 435 Pfam PF08013 Tagatose 6 phosphate kinase 4 424 7.4E-193 T 28-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AL549_RS02640 8bfdf27d6378900fbadb4c092dd1756b 435 SUPERFAMILY SSF51569 4 424 3.85E-163 T 28-03-2018 AL549_RS02640 8bfdf27d6378900fbadb4c092dd1756b 435 PIRSF PIRSF009264 1 430 6.5E-205 T 28-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AL549_RS02640 8bfdf27d6378900fbadb4c092dd1756b 435 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 424 4.9E-211 T 28-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AL549_RS06800 e067f202b5662c52e35d4803bb9740e5 131 Gene3D G3DSA:3.40.50.10600 5 131 3.6E-22 T 28-03-2018 AL549_RS06800 e067f202b5662c52e35d4803bb9740e5 131 SUPERFAMILY SSF52091 9 130 1.14E-37 T 28-03-2018 IPR002645 STAS domain AL549_RS06800 e067f202b5662c52e35d4803bb9740e5 131 Pfam PF11964 SpoIIAA-like 25 129 1.5E-17 T 28-03-2018 IPR021866 SpoIIAA-like AL549_RS16730 24ef267f83873dd3c490ac623638ccbb 225 SUPERFAMILY SSF161098 11 203 9.29E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS16730 24ef267f83873dd3c490ac623638ccbb 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 9.7E-24 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL549_RS16730 24ef267f83873dd3c490ac623638ccbb 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 1.6E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS16730 24ef267f83873dd3c490ac623638ccbb 225 Gene3D G3DSA:1.10.3720.10 2 222 5.4E-39 T 28-03-2018 AL549_RS10080 37db5ac0bca4bf97c8c2987abb7da01e 146 SUPERFAMILY SSF51316 17 143 6.28E-57 T 28-03-2018 IPR011057 Mss4-like AL549_RS10080 37db5ac0bca4bf97c8c2987abb7da01e 146 Pfam PF01641 SelR domain 22 140 1.3E-52 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL549_RS10080 37db5ac0bca4bf97c8c2987abb7da01e 146 Gene3D G3DSA:2.170.150.20 8 146 1.5E-58 T 28-03-2018 AL549_RS10080 37db5ac0bca4bf97c8c2987abb7da01e 146 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 18 143 1.7E-54 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL549_RS10080 37db5ac0bca4bf97c8c2987abb7da01e 146 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 19 142 37.051 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL549_RS02555 3f6dd0985ebbe84beb79b90a42ac0c12 450 Gene3D G3DSA:3.40.190.10 131 409 2.2E-42 T 28-03-2018 AL549_RS02555 3f6dd0985ebbe84beb79b90a42ac0c12 450 SUPERFAMILY SSF53850 21 405 2.32E-62 T 28-03-2018 AL549_RS02555 3f6dd0985ebbe84beb79b90a42ac0c12 450 Pfam PF01547 Bacterial extracellular solute-binding protein 32 318 1.8E-34 T 28-03-2018 IPR006059 Solute-binding family 1 GO:0006810 AL549_RS02555 3f6dd0985ebbe84beb79b90a42ac0c12 450 Gene3D G3DSA:3.40.190.10 15 125 0.13 T 28-03-2018 AL549_RS06740 7cc17dbc34941f893a125d2a1cc1a5b7 510 Pfam PF03606 C4-dicarboxylate anaerobic carrier 20 505 1.6E-135 T 28-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AL549_RS03265 651a4982666919fe8546b96d6adffd93 743 SUPERFAMILY SSF51126 382 712 3.77E-48 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AL549_RS03265 651a4982666919fe8546b96d6adffd93 743 Gene3D G3DSA:2.160.20.10 373 728 1.5E-26 T 28-03-2018 IPR012334 Pectin lyase fold AL549_RS12320 6adca74207e1eb49ae3e140f910e5e2d 106 SUPERFAMILY SSF52091 7 101 1.77E-20 T 28-03-2018 IPR002645 STAS domain AL549_RS12320 6adca74207e1eb49ae3e140f910e5e2d 106 Gene3D G3DSA:3.30.750.24 1 105 1.9E-11 T 28-03-2018 IPR002645 STAS domain AL549_RS12320 6adca74207e1eb49ae3e140f910e5e2d 106 Pfam PF01740 STAS domain 10 99 2.1E-10 T 28-03-2018 IPR002645 STAS domain AL549_RS15535 7b9e082859ab0c608d562ad189f12d0a 158 SUPERFAMILY SSF56784 1 141 3.25E-22 T 28-03-2018 IPR023214 HAD-like domain AL549_RS15535 7b9e082859ab0c608d562ad189f12d0a 158 Gene3D G3DSA:3.40.50.1000 2 154 6.2E-23 T 28-03-2018 IPR023214 HAD-like domain AL549_RS15535 7b9e082859ab0c608d562ad189f12d0a 158 Pfam PF13419 Haloacid dehalogenase-like hydrolase 25 132 6.2E-9 T 28-03-2018 IPR023214 HAD-like domain AL549_RS02390 2e5d531afc97acb4e4b853e6a7614fbd 222 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 39 218 2.1E-32 T 28-03-2018 AL549_RS02390 2e5d531afc97acb4e4b853e6a7614fbd 222 SUPERFAMILY SSF51735 7 220 5.43E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS02390 2e5d531afc97acb4e4b853e6a7614fbd 222 Gene3D G3DSA:3.40.50.720 2 36 0.005 T 28-03-2018 AL549_RS02390 2e5d531afc97acb4e4b853e6a7614fbd 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 57 68 3.2E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS02390 2e5d531afc97acb4e4b853e6a7614fbd 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 205 3.2E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS02390 2e5d531afc97acb4e4b853e6a7614fbd 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.2E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS02390 2e5d531afc97acb4e4b853e6a7614fbd 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 148 3.2E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS02390 2e5d531afc97acb4e4b853e6a7614fbd 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 165 3.2E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS02390 2e5d531afc97acb4e4b853e6a7614fbd 222 Gene3D G3DSA:3.40.50.720 37 222 2.7E-35 T 28-03-2018 AL549_RS19100 d922889ed66c98dc47c5c356c2431d27 298 Pfam PF01551 Peptidase family M23 199 293 2.1E-31 T 28-03-2018 IPR016047 Peptidase M23 AL549_RS19100 d922889ed66c98dc47c5c356c2431d27 298 SMART SM00257 38 82 2.1E-9 T 28-03-2018 IPR018392 LysM domain AL549_RS19100 d922889ed66c98dc47c5c356c2431d27 298 Gene3D G3DSA:2.70.70.10 124 298 4.9E-39 T 28-03-2018 AL549_RS19100 d922889ed66c98dc47c5c356c2431d27 298 SUPERFAMILY SSF51261 38 297 1.57E-50 T 28-03-2018 IPR011055 Duplicated hybrid motif AL549_RS19100 d922889ed66c98dc47c5c356c2431d27 298 Gene3D G3DSA:3.10.350.10 27 123 2.9E-13 T 28-03-2018 AL549_RS19100 d922889ed66c98dc47c5c356c2431d27 298 Pfam PF01476 LysM domain 39 81 9.2E-10 T 28-03-2018 IPR018392 LysM domain AL549_RS05590 f0e5b58fda6efb2cd16693ac5b082d43 422 Pfam PF13006 Insertion element 4 transposase N-terminal 18 109 2.6E-29 T 28-03-2018 IPR024473 Transposase, IS4, N-terminal AL549_RS05590 f0e5b58fda6efb2cd16693ac5b082d43 422 SUPERFAMILY SSF53098 96 357 1.37E-28 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS05590 f0e5b58fda6efb2cd16693ac5b082d43 422 Gene3D G3DSA:3.90.350.10 110 333 1.3E-18 T 28-03-2018 IPR014736 Transposase, Tn5-like, core AL549_RS05590 f0e5b58fda6efb2cd16693ac5b082d43 422 Pfam PF01609 Transposase DDE domain 128 352 2.8E-24 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL549_RS00195 6bcf4aa5c65114f4f0984d66b37a63b2 156 Pfam PF14316 Domain of unknown function (DUF4381) 9 145 2.5E-34 T 28-03-2018 IPR025489 Protein of unknown function (DUF4381 AL549_RS06675 3f8a5b8659d6ed1aa48f05707296f997 292 SUPERFAMILY SSF53822 8 292 1.18E-86 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AL549_RS06675 3f8a5b8659d6ed1aa48f05707296f997 292 Gene3D G3DSA:3.40.50.2300 139 289 6.8E-40 T 28-03-2018 AL549_RS06675 3f8a5b8659d6ed1aa48f05707296f997 292 Pfam PF13407 Periplasmic binding protein domain 28 277 5.3E-60 T 28-03-2018 IPR025997 Periplasmic binding protein AL549_RS06675 3f8a5b8659d6ed1aa48f05707296f997 292 Gene3D G3DSA:3.40.50.2300 17 138 5.7E-27 T 28-03-2018 AL549_RS23190 daaa3ab88a31c0ee04775d685cefcddc 117 SUPERFAMILY SSF53137 3 115 1.66E-51 T 28-03-2018 AL549_RS23190 daaa3ab88a31c0ee04775d685cefcddc 117 Gene3D G3DSA:3.30.420.100 1 117 1.9E-37 T 28-03-2018 AL549_RS23190 daaa3ab88a31c0ee04775d685cefcddc 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.753 T 28-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23190 daaa3ab88a31c0ee04775d685cefcddc 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 7.4E-44 T 28-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23190 daaa3ab88a31c0ee04775d685cefcddc 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 4.9E-43 T 28-03-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS15890 8ea0de459123baa16a1c20bffbe1ce33 304 SMART SM00046 5 135 3.0E-5 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AL549_RS15890 8ea0de459123baa16a1c20bffbe1ce33 304 SUPERFAMILY SSF111331 5 302 2.11E-53 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain AL549_RS15890 8ea0de459123baa16a1c20bffbe1ce33 304 Gene3D G3DSA:3.40.50.10330 3 133 1.3E-26 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 AL549_RS15890 8ea0de459123baa16a1c20bffbe1ce33 304 Pfam PF00781 Diacylglycerol kinase catalytic domain 5 127 6.9E-24 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AL549_RS06095 782828b9b6cef23cddfb443069a127f9 356 SUPERFAMILY SSF111369 46 269 6.93E-25 T 28-03-2018 AL549_RS06095 782828b9b6cef23cddfb443069a127f9 356 Gene3D G3DSA:1.10.287.470 109 147 1.9E-5 T 28-03-2018 AL549_RS06095 782828b9b6cef23cddfb443069a127f9 356 Pfam PF13533 Biotin-lipoyl like 57 104 6.6E-8 T 28-03-2018 AL549_RS06095 782828b9b6cef23cddfb443069a127f9 356 Pfam PF13437 HlyD family secretion protein 155 257 7.9E-7 T 28-03-2018 AL549_RS06095 782828b9b6cef23cddfb443069a127f9 356 Gene3D G3DSA:2.40.50.100 49 108 1.1E-7 T 28-03-2018 AL549_RS06095 782828b9b6cef23cddfb443069a127f9 356 Gene3D G3DSA:2.40.50.100 148 338 2.2E-5 T 28-03-2018 AL549_RS06095 782828b9b6cef23cddfb443069a127f9 356 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 350 2.8E-55 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL549_RS18905 84a108a6cb7513169b8a189bb9b1fbce 150 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS18905 84a108a6cb7513169b8a189bb9b1fbce 150 Pfam PF00114 Pilin (bacterial filament) 43 149 3.9E-11 T 28-03-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 AL549_RS18905 84a108a6cb7513169b8a189bb9b1fbce 150 Gene3D G3DSA:3.30.700.10 14 150 7.8E-26 T 28-03-2018 AL549_RS18905 84a108a6cb7513169b8a189bb9b1fbce 150 SUPERFAMILY SSF54523 14 116 7.32E-23 T 28-03-2018 AL549_RS18905 84a108a6cb7513169b8a189bb9b1fbce 150 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 33 5.8E-11 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS18905 84a108a6cb7513169b8a189bb9b1fbce 150 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 34 2.4E-10 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS02600 1b6851c8895ff95f2e41aee304c4b72e 655 Pfam PF14864 Alkyl sulfatase C-terminal 536 655 3.4E-30 T 28-03-2018 IPR029229 Alkyl sulfatase, C-terminal AL549_RS02600 1b6851c8895ff95f2e41aee304c4b72e 655 Pfam PF14863 Alkyl sulfatase dimerisation 388 527 3.3E-57 T 28-03-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 AL549_RS02600 1b6851c8895ff95f2e41aee304c4b72e 655 Gene3D G3DSA:3.30.1050.10 529 655 5.0E-21 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AL549_RS02600 1b6851c8895ff95f2e41aee304c4b72e 655 SMART SM00849 129 351 2.5E-19 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS02600 1b6851c8895ff95f2e41aee304c4b72e 655 SUPERFAMILY SSF55718 538 655 2.83E-27 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AL549_RS02600 1b6851c8895ff95f2e41aee304c4b72e 655 Gene3D G3DSA:3.60.15.10 102 402 6.0E-25 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS02600 1b6851c8895ff95f2e41aee304c4b72e 655 Pfam PF00753 Metallo-beta-lactamase superfamily 125 351 1.0E-32 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS02600 1b6851c8895ff95f2e41aee304c4b72e 655 SUPERFAMILY SSF56281 30 529 4.2E-147 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS05290 21bac766c4086fab88b73105c582c90d 302 Gene3D G3DSA:3.40.50.1820 71 298 1.0E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS05290 21bac766c4086fab88b73105c582c90d 302 SUPERFAMILY SSF53474 78 300 2.54E-42 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS05290 21bac766c4086fab88b73105c582c90d 302 Pfam PF01738 Dienelactone hydrolase family 91 299 1.2E-46 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 AL549_RS09460 5942bba9d0739a41b1eebc7c6650a7fd 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 238 2.8E-58 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AL549_RS09460 5942bba9d0739a41b1eebc7c6650a7fd 252 SUPERFAMILY SSF102705 1 251 8.24E-82 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AL549_RS09460 5942bba9d0739a41b1eebc7c6650a7fd 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 3.7E-67 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AL549_RS09460 5942bba9d0739a41b1eebc7c6650a7fd 252 Gene3D G3DSA:3.40.1390.30 110 223 5.5E-31 T 28-03-2018 AL549_RS09460 5942bba9d0739a41b1eebc7c6650a7fd 252 Gene3D G3DSA:3.40.1390.30 1 109 2.3E-27 T 28-03-2018 AL549_RS04605 cb2d2eb95d72627416f31338523ad053 467 SUPERFAMILY SSF81340 26 451 3.92E-114 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AL549_RS04605 cb2d2eb95d72627416f31338523ad053 467 Gene3D G3DSA:1.10.3080.10 17 459 1.5E-108 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AL549_RS04605 cb2d2eb95d72627416f31338523ad053 467 Pfam PF00654 Voltage gated chloride channel 88 435 7.3E-95 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL549_RS04605 cb2d2eb95d72627416f31338523ad053 467 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 467 51.196 T 28-03-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 AL549_RS04605 cb2d2eb95d72627416f31338523ad053 467 PRINTS PR00762 Chloride channel signature 181 200 3.2E-28 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL549_RS04605 cb2d2eb95d72627416f31338523ad053 467 PRINTS PR00762 Chloride channel signature 385 401 3.2E-28 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL549_RS04605 cb2d2eb95d72627416f31338523ad053 467 PRINTS PR00762 Chloride channel signature 403 422 3.2E-28 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL549_RS04605 cb2d2eb95d72627416f31338523ad053 467 PRINTS PR00762 Chloride channel signature 350 370 3.2E-28 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL549_RS04605 cb2d2eb95d72627416f31338523ad053 467 PRINTS PR00762 Chloride channel signature 100 117 3.2E-28 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL549_RS01380 3a6597d3a45cd88530543eeedfdd57b3 533 Gene3D G3DSA:2.60.120.200 36 340 2.3E-80 T 28-03-2018 AL549_RS01380 3a6597d3a45cd88530543eeedfdd57b3 533 SUPERFAMILY SSF49899 50 337 2.11E-80 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AL549_RS01380 3a6597d3a45cd88530543eeedfdd57b3 533 Pfam PF00722 Glycosyl hydrolases family 16 95 274 3.0E-23 T 28-03-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 AL549_RS01380 3a6597d3a45cd88530543eeedfdd57b3 533 Gene3D G3DSA:2.60.120.430 367 533 1.5E-15 T 28-03-2018 AL549_RS01860 d883fc5e5beb479fca10413e3b0de06a 367 SMART SM00387 263 360 1.5E-5 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS01860 d883fc5e5beb479fca10413e3b0de06a 367 Gene3D G3DSA:3.30.565.10 177 358 6.2E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS01860 d883fc5e5beb479fca10413e3b0de06a 367 Pfam PF06580 Histidine kinase 170 248 1.9E-24 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AL549_RS01860 d883fc5e5beb479fca10413e3b0de06a 367 SUPERFAMILY SSF55874 229 357 2.75E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS06590 bddb72d52ce70773929ccf7b9f41ff1e 441 PRINTS PR00811 Bacterial general secretion pathway protein D signature 188 198 6.1E-6 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS06590 bddb72d52ce70773929ccf7b9f41ff1e 441 PRINTS PR00811 Bacterial general secretion pathway protein D signature 361 379 6.1E-6 T 28-03-2018 IPR001775 GspD/PilQ family AL549_RS06590 bddb72d52ce70773929ccf7b9f41ff1e 441 Pfam PF13629 Pilus formation protein N terminal region 26 93 9.1E-20 T 28-03-2018 IPR032789 Pilus formation protein, N-terminal AL549_RS06590 bddb72d52ce70773929ccf7b9f41ff1e 441 Pfam PF00263 Bacterial type II and III secretion system protein 242 396 3.3E-42 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 AL549_RS00585 de14f4c9033045dd9624582d5bc9376b 471 Pfam PF03929 PepSY-associated TM region 23 408 7.1E-65 T 28-03-2018 IPR005625 PepSY-associated TM protein AL549_RS00585 de14f4c9033045dd9624582d5bc9376b 471 Gene3D G3DSA:1.20.950.20 158 280 1.7E-4 T 28-03-2018 AL549_RS11925 b1bbccc5684bf7459c1ed5af9e961a1b 800 Pfam PF00577 Outer membrane usher protein 256 606 3.3E-5 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AL549_RS11925 b1bbccc5684bf7459c1ed5af9e961a1b 800 SUPERFAMILY SSF49452 710 767 1.8E-5 T 28-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AL549_RS11925 b1bbccc5684bf7459c1ed5af9e961a1b 800 Gene3D G3DSA:2.60.40.1120 707 782 2.8E-4 T 28-03-2018 AL549_RS23450 6a0a6703d5e7520505fe5becdd0c16a1 164 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 1.0E-46 T 28-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AL549_RS23450 6a0a6703d5e7520505fe5becdd0c16a1 164 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 24.741 T 28-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AL549_RS23450 6a0a6703d5e7520505fe5becdd0c16a1 164 Gene3D G3DSA:2.60.450.10 20 157 2.3E-26 T 28-03-2018 AL549_RS23450 6a0a6703d5e7520505fe5becdd0c16a1 164 Pfam PF03968 OstA-like protein 30 141 2.7E-31 T 28-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal AL549_RS07125 5b340ce4c9a16a0b0219c585ebe52d3f 182 Gene3D G3DSA:2.160.10.10 1 182 4.6E-44 T 28-03-2018 AL549_RS07125 5b340ce4c9a16a0b0219c585ebe52d3f 182 Pfam PF12464 Maltose acetyltransferase 6 55 2.0E-8 T 28-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL549_RS07125 5b340ce4c9a16a0b0219c585ebe52d3f 182 SUPERFAMILY SSF51161 2 181 8.18E-44 T 28-03-2018 IPR011004 Trimeric LpxA-like AL549_RS07125 5b340ce4c9a16a0b0219c585ebe52d3f 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 127 161 3.4E-8 T 28-03-2018 IPR001451 Hexapeptide repeat AL549_RS07125 5b340ce4c9a16a0b0219c585ebe52d3f 182 SMART SM01266 4 56 3.7E-14 T 28-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL549_RS01115 0eae74ddbc1fe2063a3c4eff92663201 219 SUPERFAMILY SSF56784 4 209 4.46E-27 T 28-03-2018 IPR023214 HAD-like domain AL549_RS01115 0eae74ddbc1fe2063a3c4eff92663201 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 203 2.4E-50 T 28-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AL549_RS01115 0eae74ddbc1fe2063a3c4eff92663201 219 Gene3D G3DSA:3.40.50.1000 86 219 7.8E-14 T 28-03-2018 IPR023214 HAD-like domain AL549_RS01115 0eae74ddbc1fe2063a3c4eff92663201 219 Gene3D G3DSA:1.20.1440.100 18 85 2.1E-23 T 28-03-2018 AL549_RS01115 0eae74ddbc1fe2063a3c4eff92663201 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 190 3.1E-24 T 28-03-2018 AL549_RS01115 0eae74ddbc1fe2063a3c4eff92663201 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 2.0E-25 T 28-03-2018 AL549_RS06535 9d75a915a6f2ab3e361c86088802c55b 126 Gene3D G3DSA:3.10.450.10 41 120 1.1E-10 T 28-03-2018 AL549_RS06535 9d75a915a6f2ab3e361c86088802c55b 126 SUPERFAMILY SSF54403 42 115 3.19E-17 T 28-03-2018 AL549_RS06535 9d75a915a6f2ab3e361c86088802c55b 126 Pfam PF00031 Cystatin domain 44 108 6.8E-8 T 28-03-2018 IPR000010 Cystatin domain GO:0004869 AL549_RS06535 9d75a915a6f2ab3e361c86088802c55b 126 ProSitePatterns PS00287 Cysteine proteases inhibitors signature. 80 93 - T 28-03-2018 IPR018073 Proteinase inhibitor I25, cystatin, conserved site AL549_RS07380 1f5831433ca3bcae1be0ada7672c7b14 441 Pfam PF02321 Outer membrane efflux protein 238 423 9.4E-33 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL549_RS07380 1f5831433ca3bcae1be0ada7672c7b14 441 Pfam PF02321 Outer membrane efflux protein 25 214 1.3E-25 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL549_RS07380 1f5831433ca3bcae1be0ada7672c7b14 441 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 435 9.0E-105 T 28-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AL549_RS07380 1f5831433ca3bcae1be0ada7672c7b14 441 PIRSF PIRSF001892 1 98 7.7E-8 T 28-03-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 AL549_RS07380 1f5831433ca3bcae1be0ada7672c7b14 441 PIRSF PIRSF001892 22 430 5.0E-50 T 28-03-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 AL549_RS07380 1f5831433ca3bcae1be0ada7672c7b14 441 Gene3D G3DSA:1.20.1600.10 10 433 6.1E-75 T 28-03-2018 AL549_RS07380 1f5831433ca3bcae1be0ada7672c7b14 441 SUPERFAMILY SSF56954 1 429 1.7E-91 T 28-03-2018 AL549_RS19130 5ad1544f883d556d5cf56e694fd0522c 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 37.024 T 28-03-2018 IPR023081 Cell division protein FtsB AL549_RS19130 5ad1544f883d556d5cf56e694fd0522c 93 Pfam PF04977 Septum formation initiator 11 89 6.1E-28 T 28-03-2018 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 AL549_RS00770 7fde31f55f9afc1414cbbcbb604025c9 279 Pfam PF08543 Phosphomethylpyrimidine kinase 21 269 4.5E-97 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AL549_RS00770 7fde31f55f9afc1414cbbcbb604025c9 279 SUPERFAMILY SSF53613 12 272 2.81E-82 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS00770 7fde31f55f9afc1414cbbcbb604025c9 279 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 14 271 4.9E-100 T 28-03-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL549_RS00770 7fde31f55f9afc1414cbbcbb604025c9 279 Gene3D G3DSA:3.40.1190.20 2 278 4.2E-62 T 28-03-2018 IPR029056 Ribokinase-like AL549_RS00500 14e442e30561a8cd40d5a630e6674560 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 7.9E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS02175 334bb3c5c33c81e37f5c19fe1e8dbc84 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 37.895 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL549_RS02175 334bb3c5c33c81e37f5c19fe1e8dbc84 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 7.6E-20 T 28-03-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL549_RS02175 334bb3c5c33c81e37f5c19fe1e8dbc84 211 SUPERFAMILY SSF50475 11 211 5.24E-66 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL549_RS02175 334bb3c5c33c81e37f5c19fe1e8dbc84 211 Gene3D G3DSA:2.30.110.10 10 211 2.3E-68 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL549_RS02175 334bb3c5c33c81e37f5c19fe1e8dbc84 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 28-03-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL549_RS02175 334bb3c5c33c81e37f5c19fe1e8dbc84 211 PIRSF PIRSF000190 1 211 1.4E-81 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL549_RS02175 334bb3c5c33c81e37f5c19fe1e8dbc84 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 5.5E-90 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL549_RS02175 334bb3c5c33c81e37f5c19fe1e8dbc84 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 116 2.9E-24 T 28-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL549_RS17300 2021861adb75c89d68d9230dbaf087e3 435 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 20 435 3.5E-129 T 28-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL549_RS17300 2021861adb75c89d68d9230dbaf087e3 435 Gene3D G3DSA:2.40.160.60 26 435 1.8E-83 T 28-03-2018 AL549_RS17300 2021861adb75c89d68d9230dbaf087e3 435 SUPERFAMILY SSF56935 26 435 1.46E-101 T 28-03-2018 AL549_RS00880 25d9eb432360444e9ec8e9951bd035dc 144 PIRSF PIRSF028777 1 138 3.6E-52 T 28-03-2018 IPR031308 Uncharacterised conserved protein UCP028777 AL549_RS00880 25d9eb432360444e9ec8e9951bd035dc 144 Pfam PF03733 Inner membrane component domain 76 126 9.9E-18 T 28-03-2018 IPR005185 Inner membrane component domain AL549_RS00880 25d9eb432360444e9ec8e9951bd035dc 144 Pfam PF03733 Inner membrane component domain 4 53 6.9E-14 T 28-03-2018 IPR005185 Inner membrane component domain AL549_RS04755 8443b83313a13b5632066fe404c00c2a 205 Gene3D G3DSA:3.40.30.10 1 94 1.3E-21 T 28-03-2018 AL549_RS04755 8443b83313a13b5632066fe404c00c2a 205 SUPERFAMILY SSF52833 1 77 7.74E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS04755 8443b83313a13b5632066fe404c00c2a 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 117 192 3.9E-11 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL549_RS04755 8443b83313a13b5632066fe404c00c2a 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 73 7.7E-16 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL549_RS04755 8443b83313a13b5632066fe404c00c2a 205 Gene3D G3DSA:1.20.1050.10 95 205 2.9E-19 T 28-03-2018 AL549_RS04755 8443b83313a13b5632066fe404c00c2a 205 SUPERFAMILY SSF47616 72 201 6.4E-23 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL549_RS19110 00a48178de768a94a08f025c39285bb6 255 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 9 255 41.127 T 28-03-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL549_RS19110 00a48178de768a94a08f025c39285bb6 255 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 10 240 2.0E-75 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL549_RS19110 00a48178de768a94a08f025c39285bb6 255 Pfam PF01975 Survival protein SurE 11 189 2.0E-61 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL549_RS19110 00a48178de768a94a08f025c39285bb6 255 SUPERFAMILY SSF64167 9 253 9.55E-87 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL549_RS19110 00a48178de768a94a08f025c39285bb6 255 Gene3D G3DSA:3.40.1210.10 9 255 7.8E-89 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL549_RS09230 d81f0ba3296863963e37c68e6253d0f6 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 28-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AL549_RS09230 d81f0ba3296863963e37c68e6253d0f6 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 6.5E-18 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS09230 d81f0ba3296863963e37c68e6253d0f6 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 6.5E-18 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS09230 d81f0ba3296863963e37c68e6253d0f6 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 6.5E-18 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS09230 d81f0ba3296863963e37c68e6253d0f6 85 SUPERFAMILY SSF55594 1 82 1.57E-26 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS09230 d81f0ba3296863963e37c68e6253d0f6 85 Gene3D G3DSA:3.30.1340.10 1 85 1.6E-31 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS09230 d81f0ba3296863963e37c68e6253d0f6 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL549_RS09230 d81f0ba3296863963e37c68e6253d0f6 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.5E-27 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS09230 d81f0ba3296863963e37c68e6253d0f6 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 4.6E-27 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AL549_RS09085 66cc72ef6b3e92941a3f40fe7e4e4005 196 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 21 190 3.6E-30 T 28-03-2018 IPR018635 Uncharacterised protein family UPF0319 AL549_RS09085 66cc72ef6b3e92941a3f40fe7e4e4005 196 Hamap MF_00789 UPF0319 protein YccT [yccT]. 2 193 24.331 T 28-03-2018 IPR018635 Uncharacterised protein family UPF0319 AL549_RS01040 18113230bcb5853a1f555da258876a9c 226 SUPERFAMILY SSF51206 18 142 4.45E-19 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AL549_RS01040 18113230bcb5853a1f555da258876a9c 226 Gene3D G3DSA:2.60.120.10 11 147 6.9E-13 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AL549_RS01040 18113230bcb5853a1f555da258876a9c 226 Pfam PF00027 Cyclic nucleotide-binding domain 36 112 6.1E-11 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AL549_RS01040 18113230bcb5853a1f555da258876a9c 226 Gene3D G3DSA:1.10.10.10 173 226 1.4E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS16490 0437216c0002c5230d298517543ce23f 486 Gene3D G3DSA:1.10.287.950 275 486 2.0E-35 T 28-03-2018 AL549_RS16490 0437216c0002c5230d298517543ce23f 486 Gene3D G3DSA:1.10.287.950 181 274 0.015 T 28-03-2018 AL549_RS16490 0437216c0002c5230d298517543ce23f 486 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 291 443 1.5E-32 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS16490 0437216c0002c5230d298517543ce23f 486 SUPERFAMILY SSF58104 241 481 8.63E-43 T 28-03-2018 AL549_RS16490 0437216c0002c5230d298517543ce23f 486 SMART SM00283 223 477 8.4E-27 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS05020 ca3b5005c34f307d6992638452a1b607 87 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 17 82 6.6E-29 T 28-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AL549_RS05020 ca3b5005c34f307d6992638452a1b607 87 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 28 82 8.0E-26 T 28-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AL549_RS07860 5d577ecc79eba0af6a0d482472c920f9 382 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 17 376 5.3E-148 T 28-03-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA AL549_RS07860 5d577ecc79eba0af6a0d482472c920f9 382 SMART SM01154 43 382 2.0E-154 T 28-03-2018 IPR012548 Protein of unknown function DUF1704 AL549_RS07860 5d577ecc79eba0af6a0d482472c920f9 382 Pfam PF08014 Domain of unknown function (DUF1704) 46 380 5.3E-114 T 28-03-2018 IPR012548 Protein of unknown function DUF1704 AL549_RS06915 4c11763cd7686a3628102135f45a9c7b 409 Pfam PF01483 Proprotein convertase P-domain 327 407 5.8E-17 T 28-03-2018 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 AL549_RS06915 4c11763cd7686a3628102135f45a9c7b 409 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 45 190 2.4E-30 T 28-03-2018 AL549_RS06915 4c11763cd7686a3628102135f45a9c7b 409 Gene3D G3DSA:2.60.120.260 274 409 6.4E-17 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS06915 4c11763cd7686a3628102135f45a9c7b 409 Gene3D G3DSA:3.40.390.10 16 244 6.9E-12 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AL549_RS06915 4c11763cd7686a3628102135f45a9c7b 409 SUPERFAMILY SSF49785 288 408 1.4E-14 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS06915 4c11763cd7686a3628102135f45a9c7b 409 SUPERFAMILY SSF55486 21 242 1.54E-17 T 28-03-2018 AL549_RS16055 f5ace4cee823664a43695ab06241ef76 155 SUPERFAMILY SSF55729 1 140 8.47E-15 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS16055 f5ace4cee823664a43695ab06241ef76 155 Pfam PF00583 Acetyltransferase (GNAT) family 20 133 3.3E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS16055 f5ace4cee823664a43695ab06241ef76 155 Gene3D G3DSA:3.40.630.30 1 154 1.1E-13 T 28-03-2018 AL549_RS06215 d5b9e5906b5a5c1450ddbc4148cd4992 542 Pfam PF08774 VRR-NUC domain 433 535 5.4E-23 T 28-03-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AL549_RS06215 d5b9e5906b5a5c1450ddbc4148cd4992 542 Gene3D G3DSA:1.25.40.10 17 457 0.0021 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS06215 d5b9e5906b5a5c1450ddbc4148cd4992 542 SMART SM00990 425 536 1.8E-26 T 28-03-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AL549_RS00325 198bdbae1fc9e90874cbb21f7bb01e2b 127 PIRSF PIRSF028770 1 127 7.4E-73 T 28-03-2018 IPR011223 Uncharacterised conserved protein UCP028770 AL549_RS00325 198bdbae1fc9e90874cbb21f7bb01e2b 127 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 3.9E-40 T 28-03-2018 IPR011223 Uncharacterised conserved protein UCP028770 AL549_RS00325 198bdbae1fc9e90874cbb21f7bb01e2b 127 Gene3D G3DSA:1.20.5.1000 34 127 1.9E-5 T 28-03-2018 AL549_RS07390 aceb12196e48e3b0aa5d5ba35e6d5071 149 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 2.0E-38 T 28-03-2018 IPR009659 Protein of unknown function DUF1249 AL549_RS01680 aabeca21637309d0a42ae092832b9bed 606 SMART SM00642 20 491 1.3E-6 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS01680 aabeca21637309d0a42ae092832b9bed 606 SUPERFAMILY SSF51445 13 497 6.79E-86 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS01680 aabeca21637309d0a42ae092832b9bed 606 Pfam PF00128 Alpha amylase, catalytic domain 58 437 4.5E-22 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS01680 aabeca21637309d0a42ae092832b9bed 606 Gene3D G3DSA:3.20.20.80 9 499 4.5E-62 T 28-03-2018 AL549_RS17735 b9e77e991c6f7fae382945111338cbff 229 Pfam PF06930 Protein of unknown function (DUF1282) 14 224 1.4E-58 T 28-03-2018 IPR009698 Protein of unknown function DUF1282 AL549_RS02380 48a36e47c4b9c5bc47598d15d0627357 364 Gene3D G3DSA:3.20.20.70 1 364 9.3E-128 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS02380 48a36e47c4b9c5bc47598d15d0627357 364 SUPERFAMILY SSF51395 1 362 1.22E-123 T 28-03-2018 AL549_RS02380 48a36e47c4b9c5bc47598d15d0627357 364 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 340 2.0E-98 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AL549_RS19530 d809e67c27eac1f7538d43e90f3f0d39 243 Pfam PF00753 Metallo-beta-lactamase superfamily 30 218 1.7E-13 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS19530 d809e67c27eac1f7538d43e90f3f0d39 243 SUPERFAMILY SSF56281 16 236 2.3E-32 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS19530 d809e67c27eac1f7538d43e90f3f0d39 243 Gene3D G3DSA:3.60.15.10 6 242 1.6E-23 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS19530 d809e67c27eac1f7538d43e90f3f0d39 243 SMART SM00849 29 218 1.7E-12 T 28-03-2018 IPR001279 Metallo-beta-lactamase AL549_RS02740 2c52246852b4e1cbbd74b318c9099532 230 Pfam PF00005 ABC transporter 26 174 4.7E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS02740 2c52246852b4e1cbbd74b318c9099532 230 Gene3D G3DSA:3.40.50.300 3 230 1.9E-68 T 28-03-2018 AL549_RS02740 2c52246852b4e1cbbd74b318c9099532 230 SMART SM00382 35 222 9.1E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS02740 2c52246852b4e1cbbd74b318c9099532 230 SUPERFAMILY SSF52540 6 227 5.19E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS02740 2c52246852b4e1cbbd74b318c9099532 230 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS09475 4e40f88986ebad73401cd567c031c963 114 SUPERFAMILY SSF81343 4 113 9.65E-25 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL549_RS09475 4e40f88986ebad73401cd567c031c963 114 Gene3D G3DSA:1.20.1300.10 1 114 1.7E-15 T 28-03-2018 AL549_RS09475 4e40f88986ebad73401cd567c031c963 114 PIRSF PIRSF000169 1 114 7.7E-37 T 28-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AL549_RS09475 4e40f88986ebad73401cd567c031c963 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 7.1E-34 T 28-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AL549_RS21415 781f2a627afc2c50dca9bf99895ba062 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 1.4E-118 T 28-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AL549_RS21415 781f2a627afc2c50dca9bf99895ba062 279 Gene3D G3DSA:3.40.50.150 1 279 4.6E-91 T 28-03-2018 AL549_RS21415 781f2a627afc2c50dca9bf99895ba062 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL549_RS21415 781f2a627afc2c50dca9bf99895ba062 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.38 T 28-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AL549_RS21415 781f2a627afc2c50dca9bf99895ba062 279 SUPERFAMILY SSF53335 9 275 5.55E-97 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS06750 5a1b911eb937acbdb47155878b29ad61 201 SUPERFAMILY SSF48317 40 179 6.54E-28 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL549_RS06750 5a1b911eb937acbdb47155878b29ad61 201 Gene3D G3DSA:1.20.144.10 27 181 1.2E-22 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL549_RS06750 5a1b911eb937acbdb47155878b29ad61 201 Pfam PF01569 PAP2 superfamily 98 180 5.7E-15 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL549_RS06750 5a1b911eb937acbdb47155878b29ad61 201 SMART SM00014 75 175 1.6E-5 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL549_RS08005 3edabd61804272e5c8d5eaba10fc939b 241 Pfam PF13525 Outer membrane lipoprotein 26 233 1.0E-79 T 28-03-2018 AL549_RS08005 3edabd61804272e5c8d5eaba10fc939b 241 SUPERFAMILY SSF48452 30 119 7.25E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS08005 3edabd61804272e5c8d5eaba10fc939b 241 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 37.109 T 28-03-2018 IPR017689 Outer membrane protein assembly factor BamD AL549_RS08005 3edabd61804272e5c8d5eaba10fc939b 241 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 239 8.3E-79 T 28-03-2018 IPR017689 Outer membrane protein assembly factor BamD AL549_RS08005 3edabd61804272e5c8d5eaba10fc939b 241 Gene3D G3DSA:1.25.20.10 30 241 2.3E-14 T 28-03-2018 AL549_RS09330 73f52c4a4343c1575661451733dea79f 176 Pfam PF17323 Trans-membrane regulatory protein ToxS 25 174 7.2E-71 T 28-03-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 AL549_RS09330 73f52c4a4343c1575661451733dea79f 176 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 5 176 6.0E-87 T 28-03-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 AL549_RS03820 8d2eeca52cd5185190f60edcda72786b 166 Gene3D G3DSA:1.25.40.10 7 151 1.2E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS03820 8d2eeca52cd5185190f60edcda72786b 166 SUPERFAMILY SSF48452 4 91 5.06E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS08595 a426ca18bc1f05d02cf95307a385ce30 154 Gene3D G3DSA:3.40.50.2020 1 152 2.3E-25 T 28-03-2018 AL549_RS08595 a426ca18bc1f05d02cf95307a385ce30 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.625 T 28-03-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 AL549_RS08595 a426ca18bc1f05d02cf95307a385ce30 154 Pfam PF00156 Phosphoribosyl transferase domain 32 144 6.1E-13 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL549_RS08595 a426ca18bc1f05d02cf95307a385ce30 154 SUPERFAMILY SSF53271 5 146 1.26E-27 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AL549_RS12240 644b15461cdc7317b64b58cedecc78ac 409 Gene3D G3DSA:3.90.550.10 31 315 4.9E-26 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS12240 644b15461cdc7317b64b58cedecc78ac 409 Pfam PF13641 Glycosyltransferase like family 2 66 286 1.8E-12 T 28-03-2018 AL549_RS12240 644b15461cdc7317b64b58cedecc78ac 409 SUPERFAMILY SSF53448 56 330 3.0E-28 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS18280 ce0aa5ded6d34fabdf1c93311e514df9 788 Gene3D G3DSA:2.70.98.50 31 259 9.6E-91 T 28-03-2018 AL549_RS18280 ce0aa5ded6d34fabdf1c93311e514df9 788 Gene3D G3DSA:1.10.287.100 261 298 6.2E-19 T 28-03-2018 AL549_RS18280 ce0aa5ded6d34fabdf1c93311e514df9 788 Gene3D G3DSA:1.50.10.10 300 788 3.8E-100 T 28-03-2018 AL549_RS18280 ce0aa5ded6d34fabdf1c93311e514df9 788 SUPERFAMILY SSF48208 273 535 1.88E-82 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL549_RS18280 ce0aa5ded6d34fabdf1c93311e514df9 788 SUPERFAMILY SSF48208 563 783 1.88E-82 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL549_RS18280 ce0aa5ded6d34fabdf1c93311e514df9 788 Pfam PF01204 Trehalase 578 766 2.2E-9 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AL549_RS17570 5209ff9658cf86d355d7336e0a37ba23 377 Pfam PF07687 Peptidase dimerisation domain 177 284 1.1E-21 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL549_RS17570 5209ff9658cf86d355d7336e0a37ba23 377 SUPERFAMILY SSF55031 181 291 5.08E-28 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AL549_RS17570 5209ff9658cf86d355d7336e0a37ba23 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 7.6E-180 T 28-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AL549_RS17570 5209ff9658cf86d355d7336e0a37ba23 377 Gene3D G3DSA:3.40.630.10 277 375 1.7E-5 T 28-03-2018 AL549_RS17570 5209ff9658cf86d355d7336e0a37ba23 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.111 T 28-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AL549_RS17570 5209ff9658cf86d355d7336e0a37ba23 377 SUPERFAMILY SSF53187 6 180 2.24E-66 T 28-03-2018 AL549_RS17570 5209ff9658cf86d355d7336e0a37ba23 377 SUPERFAMILY SSF53187 294 376 2.24E-66 T 28-03-2018 AL549_RS17570 5209ff9658cf86d355d7336e0a37ba23 377 Pfam PF01546 Peptidase family M20/M25/M40 64 374 7.0E-46 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL549_RS17570 5209ff9658cf86d355d7336e0a37ba23 377 Gene3D G3DSA:3.40.630.10 2 276 1.0E-60 T 28-03-2018 AL549_RS17570 5209ff9658cf86d355d7336e0a37ba23 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL549_RS17905 8e01a3a3c2a67fad6bbda88439ffdd06 328 Gene3D G3DSA:3.40.50.720 1 328 1.1E-53 T 28-03-2018 AL549_RS17905 8e01a3a3c2a67fad6bbda88439ffdd06 328 SUPERFAMILY SSF51735 1 262 2.57E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS17905 8e01a3a3c2a67fad6bbda88439ffdd06 328 SUPERFAMILY SSF51735 292 326 2.57E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS17905 8e01a3a3c2a67fad6bbda88439ffdd06 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 226 4.5E-31 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL549_RS14240 b1a1a9247e658510fc1a2cde1a79c548 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.6E-13 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS10775 554352e15dde4428e9646952979eba43 197 Gene3D G3DSA:2.40.160.20 21 197 2.5E-13 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS10775 554352e15dde4428e9646952979eba43 197 SUPERFAMILY SSF56925 20 197 9.94E-17 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS13285 39e546b5df7eece5d8a4fbf19297e09a 128 SUPERFAMILY SSF55331 2 119 5.69E-33 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily AL549_RS13285 39e546b5df7eece5d8a4fbf19297e09a 128 Gene3D G3DSA:3.30.429.10 1 128 9.2E-28 T 28-03-2018 AL549_RS13285 39e546b5df7eece5d8a4fbf19297e09a 128 Pfam PF14552 Tautomerase enzyme 36 112 4.2E-26 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 AL549_RS13100 39e546b5df7eece5d8a4fbf19297e09a 128 SUPERFAMILY SSF55331 2 119 5.69E-33 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily AL549_RS13100 39e546b5df7eece5d8a4fbf19297e09a 128 Gene3D G3DSA:3.30.429.10 1 128 9.2E-28 T 28-03-2018 AL549_RS13100 39e546b5df7eece5d8a4fbf19297e09a 128 Pfam PF14552 Tautomerase enzyme 36 112 4.2E-26 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 AL549_RS05845 6d4c5a8fcfe1212d3e0772364de92224 78 Pfam PF11869 Protein of unknown function (DUF3389) 1 76 1.4E-35 T 28-03-2018 IPR021811 Protein of unknown function DUF3389 AL549_RS06955 ecdb48df7b3354d2d5500548cee13148 560 Gene3D G3DSA:3.30.560.10 105 489 1.7E-107 T 28-03-2018 AL549_RS06955 ecdb48df7b3354d2d5500548cee13148 560 SUPERFAMILY SSF54373 292 474 2.16E-63 T 28-03-2018 AL549_RS06955 ecdb48df7b3354d2d5500548cee13148 560 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL549_RS06955 ecdb48df7b3354d2d5500548cee13148 560 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 553 64.858 T 28-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AL549_RS06955 ecdb48df7b3354d2d5500548cee13148 560 SUPERFAMILY SSF51905 473 534 5.37E-89 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS06955 ecdb48df7b3354d2d5500548cee13148 560 SUPERFAMILY SSF51905 1 290 5.37E-89 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS06955 ecdb48df7b3354d2d5500548cee13148 560 Gene3D G3DSA:4.10.450.10 36 104 6.0E-27 T 28-03-2018 AL549_RS06955 ecdb48df7b3354d2d5500548cee13148 560 Pfam PF00732 GMC oxidoreductase 5 297 1.3E-91 T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL549_RS06955 ecdb48df7b3354d2d5500548cee13148 560 Pfam PF05199 GMC oxidoreductase 388 526 1.9E-42 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AL549_RS06955 ecdb48df7b3354d2d5500548cee13148 560 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 536 5.2E-239 T 28-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AL549_RS06955 ecdb48df7b3354d2d5500548cee13148 560 PIRSF PIRSF000137 1 536 9.9E-149 T 28-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL549_RS12510 bd354a3df68d4f1679889e83aee1141d 325 Gene3D G3DSA:1.10.760.10 243 325 1.7E-16 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS12510 bd354a3df68d4f1679889e83aee1141d 325 Gene3D G3DSA:1.10.760.10 98 242 2.3E-23 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS12510 bd354a3df68d4f1679889e83aee1141d 325 SUPERFAMILY SSF46626 238 323 3.58E-22 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS12510 bd354a3df68d4f1679889e83aee1141d 325 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 113 322 6.3E-59 T 28-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AL549_RS12510 bd354a3df68d4f1679889e83aee1141d 325 PRINTS PR00605 Class IC cytochrome C signature 206 228 1.6E-5 T 28-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL549_RS12510 bd354a3df68d4f1679889e83aee1141d 325 PRINTS PR00605 Class IC cytochrome C signature 164 175 1.6E-5 T 28-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL549_RS12510 bd354a3df68d4f1679889e83aee1141d 325 PIRSF PIRSF000006 1 322 1.5E-109 T 28-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AL549_RS12510 bd354a3df68d4f1679889e83aee1141d 325 SUPERFAMILY SSF46626 55 78 1.86E-30 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS12510 bd354a3df68d4f1679889e83aee1141d 325 SUPERFAMILY SSF46626 145 238 1.86E-30 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS12510 bd354a3df68d4f1679889e83aee1141d 325 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 38 83 2.7E-23 T 28-03-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal AL549_RS12510 bd354a3df68d4f1679889e83aee1141d 325 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 241 315 3.4E-10 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS12510 bd354a3df68d4f1679889e83aee1141d 325 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 154 228 6.6E-14 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS02455 087e9f76e13936e4ff2a558061677fd0 388 SUPERFAMILY SSF53383 2 387 3.03E-96 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS02455 087e9f76e13936e4ff2a558061677fd0 388 Pfam PF00155 Aminotransferase class I and II 36 383 1.2E-39 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL549_RS02455 087e9f76e13936e4ff2a558061677fd0 388 Gene3D G3DSA:3.40.640.10 44 276 7.5E-37 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS02455 087e9f76e13936e4ff2a558061677fd0 388 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 387 1.1E-121 T 28-03-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AL549_RS02455 087e9f76e13936e4ff2a558061677fd0 388 Gene3D G3DSA:3.90.1150.10 277 386 9.4E-17 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS06685 53401c873900478a287ed29e80c9696e 501 SUPERFAMILY SSF52540 269 475 4.51E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06685 53401c873900478a287ed29e80c9696e 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS06685 53401c873900478a287ed29e80c9696e 501 Pfam PF00005 ABC transporter 21 170 5.0E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS06685 53401c873900478a287ed29e80c9696e 501 Pfam PF00005 ABC transporter 270 423 3.0E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS06685 53401c873900478a287ed29e80c9696e 501 Gene3D G3DSA:3.40.50.300 1 234 8.4E-52 T 28-03-2018 AL549_RS06685 53401c873900478a287ed29e80c9696e 501 SMART SM00382 278 472 3.4E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS06685 53401c873900478a287ed29e80c9696e 501 SMART SM00382 30 225 7.6E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS06685 53401c873900478a287ed29e80c9696e 501 Gene3D G3DSA:3.40.50.300 265 489 3.4E-42 T 28-03-2018 AL549_RS06685 53401c873900478a287ed29e80c9696e 501 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS06685 53401c873900478a287ed29e80c9696e 501 SUPERFAMILY SSF52540 5 224 5.33E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS19650 97deffc5f6561ab61a55d4d9d0d4bf98 149 SUPERFAMILY SSF102400 1 146 3.27E-42 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AL549_RS19650 97deffc5f6561ab61a55d4d9d0d4bf98 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 3.6E-31 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AL549_RS19650 97deffc5f6561ab61a55d4d9d0d4bf98 149 Gene3D G3DSA:3.40.50.10110 1 147 2.4E-37 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AL549_RS16320 a90c17d5546676294c26b000a261e27f 546 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 180 1.9E-9 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL549_RS16320 a90c17d5546676294c26b000a261e27f 546 SMART SM00283 284 545 2.2E-60 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS16320 a90c17d5546676294c26b000a261e27f 546 Gene3D G3DSA:1.10.287.950 73 318 2.3E-9 T 28-03-2018 AL549_RS16320 a90c17d5546676294c26b000a261e27f 546 Gene3D G3DSA:1.10.287.950 319 546 1.0E-46 T 28-03-2018 AL549_RS16320 a90c17d5546676294c26b000a261e27f 546 SUPERFAMILY SSF58104 248 546 5.14E-63 T 28-03-2018 AL549_RS16320 a90c17d5546676294c26b000a261e27f 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 6.0E-8 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS16320 a90c17d5546676294c26b000a261e27f 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 298 327 6.0E-8 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS16320 a90c17d5546676294c26b000a261e27f 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 357 510 1.0E-36 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS18505 1918f0024ee746ee0d9ad302ee1cd3c4 337 Pfam PF01136 Peptidase family U32 75 336 1.2E-69 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL549_RS18505 1918f0024ee746ee0d9ad302ee1cd3c4 337 Gene3D G3DSA:3.20.20.150 10 327 5.8E-17 T 28-03-2018 AL549_RS18505 1918f0024ee746ee0d9ad302ee1cd3c4 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL549_RS02440 6a4bb913e24d7ef840813ceb5917e8fe 263 Gene3D G3DSA:1.20.120.530 99 244 1.6E-27 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL549_RS02440 6a4bb913e24d7ef840813ceb5917e8fe 263 SUPERFAMILY SSF46785 14 107 8.65E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02440 6a4bb913e24d7ef840813ceb5917e8fe 263 SUPERFAMILY SSF48008 100 237 2.12E-28 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL549_RS02440 6a4bb913e24d7ef840813ceb5917e8fe 263 Gene3D G3DSA:1.10.10.10 11 81 8.9E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02440 6a4bb913e24d7ef840813ceb5917e8fe 263 Pfam PF07729 FCD domain 102 228 1.2E-21 T 28-03-2018 IPR011711 GntR, C-terminal AL549_RS02440 6a4bb913e24d7ef840813ceb5917e8fe 263 SMART SM00895 102 229 9.5E-21 T 28-03-2018 IPR011711 GntR, C-terminal AL549_RS02440 6a4bb913e24d7ef840813ceb5917e8fe 263 SMART SM00345 21 80 6.3E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS02440 6a4bb913e24d7ef840813ceb5917e8fe 263 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 80 5.6E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS02440 6a4bb913e24d7ef840813ceb5917e8fe 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 3.9E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS02440 6a4bb913e24d7ef840813ceb5917e8fe 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 3.9E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL549_RS15895 75843a70b64abd0f5f3206aaf8c59120 235 Gene3D G3DSA:3.40.190.10 129 232 1.7E-4 T 28-03-2018 AL549_RS15895 75843a70b64abd0f5f3206aaf8c59120 235 Gene3D G3DSA:3.40.190.10 14 128 3.3E-6 T 28-03-2018 AL549_RS15895 75843a70b64abd0f5f3206aaf8c59120 235 SUPERFAMILY SSF53850 16 230 2.72E-28 T 28-03-2018 AL549_RS15895 75843a70b64abd0f5f3206aaf8c59120 235 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 229 1.7E-12 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS00870 48cb7c5b0c72f1ba9dab566c5f1e5144 550 SUPERFAMILY SSF53649 284 505 5.56E-19 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS00870 48cb7c5b0c72f1ba9dab566c5f1e5144 550 Pfam PF00884 Sulfatase 242 532 4.4E-42 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL549_RS00870 48cb7c5b0c72f1ba9dab566c5f1e5144 550 Pfam PF08019 Domain of unknown function (DUF1705) 60 211 1.4E-49 T 28-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AL549_RS00870 48cb7c5b0c72f1ba9dab566c5f1e5144 550 Gene3D G3DSA:3.40.720.10 204 543 2.9E-21 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS03275 c096018bd5034524dc72971a8fa4263c 388 Pfam PF14583 Oligogalacturonate lyase 1 386 7.4E-253 T 28-03-2018 IPR027946 Oligogalacturonate lyase domain GO:0045490|GO:0047487 KEGG: 00040+4.2.2.6 AL549_RS03275 c096018bd5034524dc72971a8fa4263c 388 SUPERFAMILY SSF82171 185 384 1.44E-24 T 28-03-2018 AL549_RS03275 c096018bd5034524dc72971a8fa4263c 388 SUPERFAMILY SSF82171 27 133 1.44E-24 T 28-03-2018 AL549_RS03275 c096018bd5034524dc72971a8fa4263c 388 Gene3D G3DSA:2.130.10.10 1 387 6.8E-34 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL549_RS05265 a1d386489715b9d3373446fc61d6ea76 466 PRINTS PR00110 Alpha-amylase signature 240 258 4.4E-15 T 28-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL549_RS05265 a1d386489715b9d3373446fc61d6ea76 466 PRINTS PR00110 Alpha-amylase signature 98 109 4.4E-15 T 28-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL549_RS05265 a1d386489715b9d3373446fc61d6ea76 466 PRINTS PR00110 Alpha-amylase signature 211 222 4.4E-15 T 28-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL549_RS05265 a1d386489715b9d3373446fc61d6ea76 466 PRINTS PR00110 Alpha-amylase signature 65 82 4.4E-15 T 28-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL549_RS05265 a1d386489715b9d3373446fc61d6ea76 466 PRINTS PR00110 Alpha-amylase signature 306 318 4.4E-15 T 28-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL549_RS05265 a1d386489715b9d3373446fc61d6ea76 466 SUPERFAMILY SSF51011 404 464 4.68E-5 T 28-03-2018 AL549_RS05265 a1d386489715b9d3373446fc61d6ea76 466 SMART SM00642 24 382 1.2E-41 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS05265 a1d386489715b9d3373446fc61d6ea76 466 Gene3D G3DSA:3.20.20.80 19 387 3.4E-45 T 28-03-2018 AL549_RS05265 a1d386489715b9d3373446fc61d6ea76 466 Pfam PF00128 Alpha amylase, catalytic domain 48 255 1.2E-14 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL549_RS05265 a1d386489715b9d3373446fc61d6ea76 466 SUPERFAMILY SSF51445 32 411 1.9E-62 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AL549_RS05265 a1d386489715b9d3373446fc61d6ea76 466 Gene3D G3DSA:2.60.40.1180 388 465 5.7E-9 T 28-03-2018 AL549_RS06450 17dee2a9433dcd825784c74c44c00b53 82 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 3 73 4.0E-34 T 28-03-2018 IPR020137 Uncharacterised protein family HI1736 AL549_RS06450 17dee2a9433dcd825784c74c44c00b53 82 Pfam PF10688 Bacterial inner membrane protein 4 73 3.5E-8 T 28-03-2018 IPR019629 Uncharacterised protein family HI1736/YgjV AL549_RS16580 c8e07c2ff4bcb5b0f4bfa9fb9e8c11c2 215 Gene3D G3DSA:1.10.3480.10 1 214 3.5E-49 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AL549_RS16580 c8e07c2ff4bcb5b0f4bfa9fb9e8c11c2 215 Pfam PF02613 Nitrate reductase delta subunit 51 183 9.8E-39 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AL549_RS16580 c8e07c2ff4bcb5b0f4bfa9fb9e8c11c2 215 SUPERFAMILY SSF89155 9 213 4.45E-51 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AL549_RS16580 c8e07c2ff4bcb5b0f4bfa9fb9e8c11c2 215 Hamap MF_01150 Chaperone protein TorD [torD]. 4 213 34.243 T 28-03-2018 IPR023069 Chaperone TorD AL549_RS23000 d91e06a30296109d44f75eb033f9ca2c 351 Gene3D G3DSA:3.40.50.2000 183 335 2.6E-30 T 28-03-2018 AL549_RS23000 d91e06a30296109d44f75eb033f9ca2c 351 Pfam PF00534 Glycosyl transferases group 1 189 331 2.3E-26 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AL549_RS23000 d91e06a30296109d44f75eb033f9ca2c 351 SUPERFAMILY SSF53756 67 330 5.76E-38 T 28-03-2018 AL549_RS14465 4b35df3a6afa6154520edf404d8e4327 46 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 5.1E-11 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS08745 2237a77cdcf209e54051b721e92f1097 258 PIRSF PIRSF029037 1 258 7.6E-115 T 28-03-2018 IPR016908 Uncharacterised conserved protein UCP029037 AL549_RS08745 2237a77cdcf209e54051b721e92f1097 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 3.0E-113 T 28-03-2018 IPR016908 Uncharacterised conserved protein UCP029037 AL549_RS16105 bc9a1ff9e91778aa4296c8ff99636fbb 210 SUPERFAMILY SSF56925 55 181 4.19E-11 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS16105 bc9a1ff9e91778aa4296c8ff99636fbb 210 Gene3D G3DSA:2.40.160.10 26 128 0.0044 T 28-03-2018 AL549_RS16105 bc9a1ff9e91778aa4296c8ff99636fbb 210 Gene3D G3DSA:2.40.160.10 129 207 0.034 T 28-03-2018 AL549_RS20325 4289703cf5f9c13d4235a459a17165ac 260 Gene3D G3DSA:1.10.287.460 31 137 8.1E-29 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AL549_RS20325 4289703cf5f9c13d4235a459a17165ac 260 SUPERFAMILY SSF54534 48 253 1.19E-64 T 28-03-2018 AL549_RS20325 4289703cf5f9c13d4235a459a17165ac 260 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 37 157 1.2E-32 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AL549_RS20325 4289703cf5f9c13d4235a459a17165ac 260 Gene3D G3DSA:3.10.50.40 138 255 2.1E-45 T 28-03-2018 AL549_RS20325 4289703cf5f9c13d4235a459a17165ac 260 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 251 4.7E-30 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL549_RS09240 4136679b8c81013c7f5ae13e2717679a 246 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 13 229 7.2E-42 T 28-03-2018 AL549_RS09240 4136679b8c81013c7f5ae13e2717679a 246 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 7 246 27.605 T 28-03-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 AL549_RS02235 bf26718488565e601f8ed5176d243cc1 403 SUPERFAMILY SSF102114 13 344 4.71E-45 T 28-03-2018 AL549_RS02235 bf26718488565e601f8ed5176d243cc1 403 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 178 401 2.0E-10 T 28-03-2018 AL549_RS02235 bf26718488565e601f8ed5176d243cc1 403 Pfam PF13186 Iron-sulfur cluster-binding domain 274 334 4.5E-6 T 28-03-2018 IPR023885 4Fe4S-binding SPASM domain AL549_RS02235 bf26718488565e601f8ed5176d243cc1 403 Gene3D G3DSA:3.20.20.70 8 356 2.6E-40 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS02235 bf26718488565e601f8ed5176d243cc1 403 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 274 364 4.8E-17 T 28-03-2018 IPR023885 4Fe4S-binding SPASM domain AL549_RS02235 bf26718488565e601f8ed5176d243cc1 403 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 18 383 2.1E-151 T 28-03-2018 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 AL549_RS02235 bf26718488565e601f8ed5176d243cc1 403 Pfam PF04055 Radical SAM superfamily 24 188 1.7E-13 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS01475 99b6fd520e646647637825d466994a7f 153 Pfam PF00174 Oxidoreductase molybdopterin binding domain 39 126 7.2E-5 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL549_RS01475 99b6fd520e646647637825d466994a7f 153 Gene3D G3DSA:3.90.420.10 10 153 1.7E-22 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL549_RS01475 99b6fd520e646647637825d466994a7f 153 SUPERFAMILY SSF56524 18 151 6.54E-15 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL549_RS21160 175909896237e14546ba1c7813aafe1d 183 SUPERFAMILY SSF64288 11 178 6.2E-46 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL549_RS21160 175909896237e14546ba1c7813aafe1d 183 Pfam PF04345 Chorismate lyase 16 182 5.8E-54 T 28-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 AL549_RS21160 175909896237e14546ba1c7813aafe1d 183 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 19 178 25.085 T 28-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 AL549_RS21160 175909896237e14546ba1c7813aafe1d 183 Gene3D G3DSA:3.40.1410.10 11 178 2.0E-42 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL549_RS20720 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 5.9E-83 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL549_RS20720 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 5.9E-83 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL549_RS20720 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 5.9E-83 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL549_RS20720 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 5.9E-83 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL549_RS20720 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 5.9E-83 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL549_RS20720 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 5.9E-83 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL549_RS20720 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 5.9E-83 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL549_RS20720 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 5.9E-83 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL549_RS20720 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 5.9E-83 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL549_RS20720 ae815f0be22e5f1c50de6257ccaffd52 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 6.5E-129 T 28-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AL549_RS20720 ae815f0be22e5f1c50de6257ccaffd52 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.142 T 28-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AL549_RS20720 ae815f0be22e5f1c50de6257ccaffd52 320 Pfam PF00365 Phosphofructokinase 4 276 2.5E-108 T 28-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL549_RS20720 ae815f0be22e5f1c50de6257ccaffd52 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 28-03-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL549_RS20720 ae815f0be22e5f1c50de6257ccaffd52 320 Gene3D G3DSA:3.40.50.450 1 209 2.4E-84 T 28-03-2018 AL549_RS20720 ae815f0be22e5f1c50de6257ccaffd52 320 PIRSF PIRSF000532 1 320 2.9E-126 T 28-03-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AL549_RS20720 ae815f0be22e5f1c50de6257ccaffd52 320 Gene3D G3DSA:3.40.50.450 210 308 3.1E-9 T 28-03-2018 AL549_RS20720 ae815f0be22e5f1c50de6257ccaffd52 320 SUPERFAMILY SSF53784 3 310 1.2E-112 T 28-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL549_RS09590 66671851b198a7f165ef20545c894b71 284 Pfam PF00561 alpha/beta hydrolase fold 27 139 2.0E-18 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS09590 66671851b198a7f165ef20545c894b71 284 Gene3D G3DSA:3.40.50.1820 2 280 7.9E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS09590 66671851b198a7f165ef20545c894b71 284 SUPERFAMILY SSF53474 10 282 8.9E-44 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS18935 f071312894623906e4c3dbfb97c1380d 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 57 7.2E-25 T 28-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AL549_RS18935 f071312894623906e4c3dbfb97c1380d 64 SUPERFAMILY SSF57716 2 62 3.99E-22 T 28-03-2018 AL549_RS18935 f071312894623906e4c3dbfb97c1380d 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.78 T 28-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AL549_RS18935 f071312894623906e4c3dbfb97c1380d 64 Gene3D G3DSA:3.30.50.10 2 60 2.4E-25 T 28-03-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 AL549_RS03655 caa6cd6beb8a4e605bb2e88e2451f56a 242 Gene3D G3DSA:3.40.190.10 161 240 0.0012 T 28-03-2018 AL549_RS03655 caa6cd6beb8a4e605bb2e88e2451f56a 242 SUPERFAMILY SSF53850 26 240 8.69E-39 T 28-03-2018 AL549_RS03655 caa6cd6beb8a4e605bb2e88e2451f56a 242 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 240 2.1E-30 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS03655 caa6cd6beb8a4e605bb2e88e2451f56a 242 Gene3D G3DSA:3.40.190.10 13 160 4.9E-21 T 28-03-2018 AL549_RS03655 caa6cd6beb8a4e605bb2e88e2451f56a 242 SMART SM00062 19 242 5.8E-5 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS04860 7e5eeab0ca17c7da7ecf84bcb2e92939 248 SUPERFAMILY SSF53850 13 234 3.95E-32 T 28-03-2018 AL549_RS04860 7e5eeab0ca17c7da7ecf84bcb2e92939 248 Gene3D G3DSA:3.40.190.10 129 236 7.4E-6 T 28-03-2018 AL549_RS04860 7e5eeab0ca17c7da7ecf84bcb2e92939 248 Gene3D G3DSA:3.40.190.10 7 128 1.6E-11 T 28-03-2018 AL549_RS04860 7e5eeab0ca17c7da7ecf84bcb2e92939 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 21 234 6.1E-17 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS12685 356d25749740d07417d970d5b6e0215e 781 Gene3D G3DSA:3.40.50.300 444 587 1.6E-5 T 28-03-2018 AL549_RS12685 356d25749740d07417d970d5b6e0215e 781 SUPERFAMILY SSF52540 456 626 2.23E-10 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS03070 9402ec344c75ba0b48f138c216af9b2a 408 Pfam PF13416 Bacterial extracellular solute-binding protein 43 339 1.0E-15 T 28-03-2018 AL549_RS03070 9402ec344c75ba0b48f138c216af9b2a 408 SUPERFAMILY SSF53850 18 389 2.62E-39 T 28-03-2018 AL549_RS03070 9402ec344c75ba0b48f138c216af9b2a 408 Gene3D G3DSA:3.40.190.10 230 365 1.2E-8 T 28-03-2018 AL549_RS03070 9402ec344c75ba0b48f138c216af9b2a 408 Gene3D G3DSA:3.40.190.10 17 197 3.3E-18 T 28-03-2018 AL549_RS16710 bff80c452c2b14a994c848c02b0848a5 55 Pfam PF10689 Protein of unknown function (DUF2496) 8 50 1.6E-23 T 28-03-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related AL549_RS13415 8e3592c1904dd1637aabd26ab92a8258 168 SUPERFAMILY SSF52540 2 165 2.4E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS13415 8e3592c1904dd1637aabd26ab92a8258 168 Gene3D G3DSA:3.40.50.300 2 167 5.4E-15 T 28-03-2018 AL549_RS13415 8e3592c1904dd1637aabd26ab92a8258 168 Pfam PF13671 AAA domain 6 138 1.3E-10 T 28-03-2018 AL549_RS23490 de27e2607ff62e94af8d8c9bbc675f64 219 Gene3D G3DSA:3.10.450.50 35 91 2.8E-7 T 28-03-2018 AL549_RS23490 de27e2607ff62e94af8d8c9bbc675f64 219 Gene3D G3DSA:3.10.450.50 92 180 4.2E-17 T 28-03-2018 AL549_RS23490 de27e2607ff62e94af8d8c9bbc675f64 219 Pfam PF05494 MlaC protein 41 206 1.8E-46 T 28-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AL549_RS23490 de27e2607ff62e94af8d8c9bbc675f64 219 PIRSF PIRSF004649 8 219 1.2E-54 T 28-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AL549_RS16035 17dc6cdf98f8659e72278253ec428ac6 208 Pfam PF00293 NUDIX domain 45 162 5.9E-15 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL549_RS16035 17dc6cdf98f8659e72278253ec428ac6 208 SUPERFAMILY SSF55811 40 197 2.57E-34 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL549_RS16035 17dc6cdf98f8659e72278253ec428ac6 208 Gene3D G3DSA:3.90.79.10 23 206 5.9E-39 T 28-03-2018 AL549_RS21370 c12df03a7dc41c5e38940fe5b1698632 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 4.3E-49 T 28-03-2018 IPR019598 Universal stress protein B AL549_RS21370 c12df03a7dc41c5e38940fe5b1698632 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 36.994 T 28-03-2018 IPR019598 Universal stress protein B AL549_RS22675 efe5e38895869d63b476c167fa131f9f 632 Gene3D G3DSA:3.40.720.10 248 533 3.1E-36 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS22675 efe5e38895869d63b476c167fa131f9f 632 SUPERFAMILY SSF53649 258 594 5.09E-40 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS22675 efe5e38895869d63b476c167fa131f9f 632 Pfam PF00884 Sulfatase 260 529 2.2E-26 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL549_RS00360 1342b2f89755835c07c28ad3a8db5f24 166 Pfam PF00583 Acetyltransferase (GNAT) family 34 136 8.6E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS00360 1342b2f89755835c07c28ad3a8db5f24 166 Gene3D G3DSA:3.40.630.30 1 166 1.1E-33 T 28-03-2018 AL549_RS00360 1342b2f89755835c07c28ad3a8db5f24 166 SUPERFAMILY SSF55729 3 161 3.09E-37 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS16000 7c488450e2a1f5285393a60f44fbffa3 458 PIRSF PIRSF019381 1 458 3.3E-199 T 28-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AL549_RS16000 7c488450e2a1f5285393a60f44fbffa3 458 Pfam PF04317 YcjX-like family, DUF463 20 457 7.7E-187 T 28-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AL549_RS16000 7c488450e2a1f5285393a60f44fbffa3 458 Gene3D G3DSA:3.40.50.300 13 384 2.4E-17 T 28-03-2018 AL549_RS07430 0422d03c7048652cf00d3ac29a176aa3 367 Pfam PF03969 AFG1-like ATPase 1 364 4.4E-156 T 28-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 AL549_RS07430 0422d03c7048652cf00d3ac29a176aa3 367 SUPERFAMILY SSF52540 62 201 1.52E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS07430 0422d03c7048652cf00d3ac29a176aa3 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 53.367 T 28-03-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 AL549_RS07430 0422d03c7048652cf00d3ac29a176aa3 367 Gene3D G3DSA:3.40.50.300 18 352 3.1E-12 T 28-03-2018 AL549_RS04465 d3ed9d316abf68b16970ddb7c1ee3161 140 Pfam PF13673 Acetyltransferase (GNAT) domain 40 122 2.4E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS04465 d3ed9d316abf68b16970ddb7c1ee3161 140 SUPERFAMILY SSF55729 33 139 9.49E-24 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS04465 d3ed9d316abf68b16970ddb7c1ee3161 140 Gene3D G3DSA:3.40.630.30 36 140 1.5E-20 T 28-03-2018 AL549_RS02525 f1a4349779fe400bd41a727462bfae29 599 SUPERFAMILY SSF63829 295 478 1.31E-9 T 28-03-2018 AL549_RS02525 f1a4349779fe400bd41a727462bfae29 599 Gene3D G3DSA:2.60.40.10 20 137 0.011 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS02525 f1a4349779fe400bd41a727462bfae29 599 Gene3D G3DSA:2.120.10.30 290 447 1.4E-8 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL549_RS06940 362a6cd07fb92bc69c1cf8302799e6f7 397 Gene3D G3DSA:3.40.50.300 1 292 8.0E-67 T 28-03-2018 AL549_RS06940 362a6cd07fb92bc69c1cf8302799e6f7 397 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 385 1.1E-196 T 28-03-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 AL549_RS06940 362a6cd07fb92bc69c1cf8302799e6f7 397 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS06940 362a6cd07fb92bc69c1cf8302799e6f7 397 SUPERFAMILY SSF52540 42 273 1.27E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06940 362a6cd07fb92bc69c1cf8302799e6f7 397 Pfam PF00005 ABC transporter 44 195 1.1E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS06940 362a6cd07fb92bc69c1cf8302799e6f7 397 SMART SM00382 52 253 1.2E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS09825 3a82098849e252f4dc27bd256a0064f7 652 SUPERFAMILY SSF54001 245 394 3.14E-8 T 28-03-2018 AL549_RS09825 3a82098849e252f4dc27bd256a0064f7 652 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 67 224 1.7E-31 T 28-03-2018 IPR024618 Domain of unknown function DUF3857 AL549_RS09825 3a82098849e252f4dc27bd256a0064f7 652 Gene3D G3DSA:3.10.670.10 316 465 0.0018 T 28-03-2018 AL549_RS23260 57abe3de563172dfbb0a3beec335737b 290 SUPERFAMILY SSF103481 41 141 7.72E-14 T 28-03-2018 AL549_RS23260 57abe3de563172dfbb0a3beec335737b 290 Pfam PF00892 EamA-like transporter family 6 137 5.2E-12 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS23260 57abe3de563172dfbb0a3beec335737b 290 Pfam PF00892 EamA-like transporter family 143 268 2.2E-8 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS23260 57abe3de563172dfbb0a3beec335737b 290 SUPERFAMILY SSF103481 178 268 1.57E-13 T 28-03-2018 AL549_RS05630 21e22c1a7cb93fb1e190cf078daf329d 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 86 2.2E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS05630 21e22c1a7cb93fb1e190cf078daf329d 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 102 2.2E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS05630 21e22c1a7cb93fb1e190cf078daf329d 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 136 156 2.2E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS05630 21e22c1a7cb93fb1e190cf078daf329d 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 122 2.2E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS05630 21e22c1a7cb93fb1e190cf078daf329d 161 SUPERFAMILY SSF46785 10 159 6.66E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS05630 21e22c1a7cb93fb1e190cf078daf329d 161 ProSitePatterns PS01117 MarR-type HTH domain signature. 85 119 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL549_RS05630 21e22c1a7cb93fb1e190cf078daf329d 161 SMART SM00347 43 146 1.6E-25 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS05630 21e22c1a7cb93fb1e190cf078daf329d 161 Pfam PF01047 MarR family 51 111 9.8E-15 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL549_RS05630 21e22c1a7cb93fb1e190cf078daf329d 161 Gene3D G3DSA:1.10.10.10 1 161 1.1E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21375 cfad2a70c58588c6640cbf54f9d0a0cd 175 Gene3D G3DSA:1.20.1260.10 1 162 4.8E-41 T 28-03-2018 IPR012347 Ferritin-related AL549_RS21375 cfad2a70c58588c6640cbf54f9d0a0cd 175 Pfam PF00210 Ferritin-like domain 8 143 7.3E-39 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AL549_RS21375 cfad2a70c58588c6640cbf54f9d0a0cd 175 SUPERFAMILY SSF47240 1 160 3.57E-58 T 28-03-2018 IPR009078 Ferritin-like superfamily AL549_RS14380 07de5b8b481caf161948d389b9e33257 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.9E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS02400 d9ecd3f01901a4056ba48c80dd2fdefd 173 Pfam PF10688 Bacterial inner membrane protein 5 161 3.4E-53 T 28-03-2018 IPR019629 Uncharacterised protein family HI1736/YgjV AL549_RS02400 d9ecd3f01901a4056ba48c80dd2fdefd 173 PIRSF PIRSF011443 1 172 8.0E-46 T 28-03-2018 IPR026267 Inner membrane protein YgjV AL549_RS08170 29663e566b35fc77d5ac55b69ea0bd2a 151 SMART SM00116 84 131 6.1E-6 T 28-03-2018 IPR000644 CBS domain AL549_RS08170 29663e566b35fc77d5ac55b69ea0bd2a 151 SMART SM00116 11 59 5.9E-9 T 28-03-2018 IPR000644 CBS domain AL549_RS08170 29663e566b35fc77d5ac55b69ea0bd2a 151 Pfam PF00571 CBS domain 79 127 9.8E-10 T 28-03-2018 IPR000644 CBS domain AL549_RS08170 29663e566b35fc77d5ac55b69ea0bd2a 151 Pfam PF00571 CBS domain 4 58 1.3E-13 T 28-03-2018 IPR000644 CBS domain AL549_RS08170 29663e566b35fc77d5ac55b69ea0bd2a 151 SUPERFAMILY SSF54631 1 132 1.77E-33 T 28-03-2018 AL549_RS08170 29663e566b35fc77d5ac55b69ea0bd2a 151 Gene3D G3DSA:3.10.580.10 1 150 6.1E-33 T 28-03-2018 AL549_RS02230 5cefc6ee2db8bdbadd92baaa9ab3acea 497 Gene3D G3DSA:3.30.1120.10 398 481 1.5E-6 T 28-03-2018 AL549_RS02230 5cefc6ee2db8bdbadd92baaa9ab3acea 497 SUPERFAMILY SSF53649 2 472 1.26E-85 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL549_RS02230 5cefc6ee2db8bdbadd92baaa9ab3acea 497 Gene3D G3DSA:3.40.720.10 4 376 9.6E-70 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS02230 5cefc6ee2db8bdbadd92baaa9ab3acea 497 Pfam PF00884 Sulfatase 4 354 6.3E-56 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL549_RS12145 4fa35c442a7d0b4e8f634fe06c1ffda8 247 Gene3D G3DSA:1.20.120.330 48 245 0.016 T 28-03-2018 AL549_RS08055 7929ef6e3f1ed5d59598a984bccc9d14 276 Gene3D G3DSA:3.30.1380.10 22 275 1.2E-86 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL549_RS08055 7929ef6e3f1ed5d59598a984bccc9d14 276 PIRSF PIRSF018455 1 276 1.1E-111 T 28-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AL549_RS08055 7929ef6e3f1ed5d59598a984bccc9d14 276 SUPERFAMILY SSF55166 23 273 9.42E-93 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL549_RS08055 7929ef6e3f1ed5d59598a984bccc9d14 276 Pfam PF03411 Penicillin-insensitive murein endopeptidase 38 271 1.6E-90 T 28-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AL549_RS03700 9a5a31c78bb0e0ae5362ed536570c27a 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL549_RS03700 9a5a31c78bb0e0ae5362ed536570c27a 243 SUPERFAMILY SSF53850 1 242 5.09E-66 T 28-03-2018 AL549_RS03700 9a5a31c78bb0e0ae5362ed536570c27a 243 Gene3D G3DSA:3.40.190.10 133 243 6.6E-20 T 28-03-2018 AL549_RS03700 9a5a31c78bb0e0ae5362ed536570c27a 243 Gene3D G3DSA:3.40.190.10 11 132 3.4E-34 T 28-03-2018 AL549_RS03700 9a5a31c78bb0e0ae5362ed536570c27a 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 5.7E-80 T 28-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 AL549_RS03700 9a5a31c78bb0e0ae5362ed536570c27a 243 SMART SM00062 22 243 4.7E-72 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS03700 9a5a31c78bb0e0ae5362ed536570c27a 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 243 1.3E-63 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS11495 a370e42935fb53452af96472836eb088 817 Gene3D G3DSA:2.40.40.20 510 671 0.048 T 28-03-2018 AL549_RS11495 a370e42935fb53452af96472836eb088 817 Pfam PF02687 FtsX-like permease family 271 368 9.6E-7 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL549_RS11495 a370e42935fb53452af96472836eb088 817 Pfam PF02687 FtsX-like permease family 715 809 1.8E-8 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL549_RS10385 98489416b436fec58025fa5f47a16b9e 98 Pfam PF03795 YCII-related domain 1 95 2.8E-30 T 28-03-2018 IPR005545 YCII-related AL549_RS10385 98489416b436fec58025fa5f47a16b9e 98 SUPERFAMILY SSF54909 1 98 2.68E-32 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL549_RS10385 98489416b436fec58025fa5f47a16b9e 98 Gene3D G3DSA:3.30.70.1060 1 98 1.2E-27 T 28-03-2018 AL549_RS04840 d915355fd34d929b1f88b990b4cd804b 375 Gene3D G3DSA:3.90.226.10 1 352 5.7E-72 T 28-03-2018 AL549_RS04840 d915355fd34d929b1f88b990b4cd804b 375 Pfam PF16113 Enoyl-CoA hydratase/isomerase 20 358 3.8E-108 T 28-03-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 AL549_RS04840 d915355fd34d929b1f88b990b4cd804b 375 SUPERFAMILY SSF52096 268 344 1.51E-55 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS04840 d915355fd34d929b1f88b990b4cd804b 375 SUPERFAMILY SSF52096 16 197 1.51E-55 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AL549_RS07245 43881f5918ed69809743429daf031c33 407 Pfam PF04932 O-Antigen ligase 185 340 1.9E-13 T 28-03-2018 IPR007016 O-antigen ligase-related AL549_RS21185 d60cfd2cefcc6b48e458111ec0926681 322 PIRSF PIRSF003097 24 318 9.4E-60 T 28-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 AL549_RS01940 aaea81e14c150702a868e003414e1f35 310 Pfam PF00005 ABC transporter 30 184 7.3E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS01940 aaea81e14c150702a868e003414e1f35 310 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS01940 aaea81e14c150702a868e003414e1f35 310 Gene3D G3DSA:3.40.50.300 2 281 3.8E-70 T 28-03-2018 AL549_RS01940 aaea81e14c150702a868e003414e1f35 310 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 264 3.7E-8 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL549_RS01940 aaea81e14c150702a868e003414e1f35 310 SMART SM00382 39 233 3.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS01940 aaea81e14c150702a868e003414e1f35 310 SUPERFAMILY SSF52540 5 254 1.36E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS13155 2e7beca209af699b346c9b532017ed20 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 1.5E-13 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS14170 2e7beca209af699b346c9b532017ed20 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 1.5E-13 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS18090 9d06cfb9804ec929c8febdade48ee640 403 Gene3D G3DSA:3.40.640.10 33 281 1.4E-58 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS18090 9d06cfb9804ec929c8febdade48ee640 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 6.0E-168 T 28-03-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AL549_RS18090 9d06cfb9804ec929c8febdade48ee640 403 Gene3D G3DSA:3.90.1150.10 282 399 2.9E-40 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS18090 9d06cfb9804ec929c8febdade48ee640 403 PIRSF PIRSF005572 21 403 8.4E-51 T 28-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AL549_RS18090 9d06cfb9804ec929c8febdade48ee640 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 2 403 2.4E-156 T 28-03-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AL549_RS18090 9d06cfb9804ec929c8febdade48ee640 403 Pfam PF00266 Aminotransferase class-V 24 392 7.5E-149 T 28-03-2018 IPR000192 Aminotransferase class V domain AL549_RS18090 9d06cfb9804ec929c8febdade48ee640 403 SUPERFAMILY SSF53383 2 400 1.6E-122 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS00315 69134c89591f6783a717193cd3cf74a6 499 Gene3D G3DSA:1.25.40.10 5 370 5.1E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS00315 69134c89591f6783a717193cd3cf74a6 499 SUPERFAMILY SSF48452 126 242 2.99E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS00315 69134c89591f6783a717193cd3cf74a6 499 SMART SM00028 127 160 18.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS00315 69134c89591f6783a717193cd3cf74a6 499 SMART SM00028 167 200 440.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS00315 69134c89591f6783a717193cd3cf74a6 499 SMART SM00028 207 240 20.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL549_RS21930 4dcf2cd5d901b96dd8e5e77a4d9c1bf0 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 3.7E-45 T 28-03-2018 IPR009383 Protein of unknown function DUF1040 AL549_RS21930 4dcf2cd5d901b96dd8e5e77a4d9c1bf0 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 4.0E-40 T 28-03-2018 IPR009383 Protein of unknown function DUF1040 AL549_RS15085 55c49b8d9f9e70bb12e2d3f5de6fa6c5 94 Gene3D G3DSA:1.10.287.1080 1 94 1.1E-17 T 28-03-2018 AL549_RS15085 55c49b8d9f9e70bb12e2d3f5de6fa6c5 94 SUPERFAMILY SSF101386 1 93 3.43E-19 T 28-03-2018 AL549_RS15085 55c49b8d9f9e70bb12e2d3f5de6fa6c5 94 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 23 89 2.3E-9 T 28-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AL549_RS01815 12656394b5a3b6ab45a1a7df36b1d1f1 83 Pfam PF11280 Protein of unknown function (DUF3081) 5 79 5.5E-29 T 28-03-2018 IPR021432 Protein of unknown function DUF3081 AL549_RS09180 53c034b56ffe73231887b8d66537b1e3 259 PRINTS PR01008 Flagellar L-ring protein signature 222 236 6.6E-21 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL549_RS09180 53c034b56ffe73231887b8d66537b1e3 259 PRINTS PR01008 Flagellar L-ring protein signature 238 252 6.6E-21 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL549_RS09180 53c034b56ffe73231887b8d66537b1e3 259 PRINTS PR01008 Flagellar L-ring protein signature 102 114 6.6E-21 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL549_RS09180 53c034b56ffe73231887b8d66537b1e3 259 PRINTS PR01008 Flagellar L-ring protein signature 201 217 6.6E-21 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL549_RS09180 53c034b56ffe73231887b8d66537b1e3 259 PRINTS PR01008 Flagellar L-ring protein signature 175 190 6.6E-21 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL549_RS09180 53c034b56ffe73231887b8d66537b1e3 259 Pfam PF02107 Flagellar L-ring protein 80 256 8.0E-58 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL549_RS09180 53c034b56ffe73231887b8d66537b1e3 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 259 27.844 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL549_RS14215 bb47c8700c81aefb22061a07d751f6b9 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 8.0E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS11455 2d25d48bddab53864be1fbe5316f0c74 129 Gene3D G3DSA:3.10.450.40 65 119 5.9E-7 T 28-03-2018 AL549_RS10025 e201cb3769edc421df84895413535fc8 100 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 4 81 8.4E-14 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL549_RS10025 e201cb3769edc421df84895413535fc8 100 SUPERFAMILY SSF46767 2 84 1.83E-26 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL549_RS10025 e201cb3769edc421df84895413535fc8 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 6 82 1.3E-25 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL549_RS10025 e201cb3769edc421df84895413535fc8 100 Gene3D G3DSA:1.10.10.10 1 100 5.1E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS17090 a02b57ed0ad86807f73e25a126f67523 128 Gene3D G3DSA:3.10.180.10 1 128 4.1E-28 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS17090 a02b57ed0ad86807f73e25a126f67523 128 SUPERFAMILY SSF54593 2 124 1.11E-27 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS17090 a02b57ed0ad86807f73e25a126f67523 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 120 7.8E-15 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL549_RS09615 f4db669c09540505ffa5d77dc0d86932 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 5.5E-29 T 28-03-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 AL549_RS09615 f4db669c09540505ffa5d77dc0d86932 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 4.6E-32 T 28-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AL549_RS09615 f4db669c09540505ffa5d77dc0d86932 220 SUPERFAMILY SSF63848 113 218 2.09E-31 T 28-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AL549_RS09615 f4db669c09540505ffa5d77dc0d86932 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 7.6E-77 T 28-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AL549_RS09615 f4db669c09540505ffa5d77dc0d86932 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 28.296 T 28-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AL549_RS09615 f4db669c09540505ffa5d77dc0d86932 220 Gene3D G3DSA:2.160.20.70 96 220 6.1E-35 T 28-03-2018 AL549_RS12210 58b993e446168d607906bf5e5eff9bbd 211 Gene3D G3DSA:2.40.160.20 8 183 2.2E-6 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS12210 58b993e446168d607906bf5e5eff9bbd 211 Pfam PF13505 Outer membrane protein beta-barrel domain 8 178 7.1E-7 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel AL549_RS12210 58b993e446168d607906bf5e5eff9bbd 211 SUPERFAMILY SSF56925 29 180 1.23E-5 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS02420 0771c30ba47a74b57d0d07c3efe3ad1a 487 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 217 463 3.0E-91 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AL549_RS02420 0771c30ba47a74b57d0d07c3efe3ad1a 487 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 5.7E-52 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AL549_RS02420 0771c30ba47a74b57d0d07c3efe3ad1a 487 SUPERFAMILY SSF51735 4 281 6.3E-100 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS02420 0771c30ba47a74b57d0d07c3efe3ad1a 487 Gene3D G3DSA:1.10.1040.10 282 487 1.1E-61 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL549_RS02420 0771c30ba47a74b57d0d07c3efe3ad1a 487 SUPERFAMILY SSF48179 283 486 1.12E-64 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL549_RS02420 0771c30ba47a74b57d0d07c3efe3ad1a 487 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 4.3E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL549_RS02420 0771c30ba47a74b57d0d07c3efe3ad1a 487 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 4.3E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL549_RS02420 0771c30ba47a74b57d0d07c3efe3ad1a 487 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 4.3E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL549_RS02420 0771c30ba47a74b57d0d07c3efe3ad1a 487 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 4.3E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL549_RS02420 0771c30ba47a74b57d0d07c3efe3ad1a 487 Gene3D G3DSA:3.40.50.720 1 281 9.0E-110 T 28-03-2018 AL549_RS02420 0771c30ba47a74b57d0d07c3efe3ad1a 487 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 28-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL549_RS21155 5069ae18f6585b526e4e3924981f1b9f 284 Pfam PF01040 UbiA prenyltransferase family 24 266 3.3E-69 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AL549_RS21155 5069ae18f6585b526e4e3924981f1b9f 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.477 T 28-03-2018 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AL549_RS21155 5069ae18f6585b526e4e3924981f1b9f 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 2.2E-107 T 28-03-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AL549_RS18040 de8cb0bbe1da854fc4ed52442019d011 376 Pfam PF08468 Methyltransferase small domain N-terminal 49 168 2.0E-5 T 28-03-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS18040 de8cb0bbe1da854fc4ed52442019d011 376 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 49.971 T 28-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS18040 de8cb0bbe1da854fc4ed52442019d011 376 Gene3D G3DSA:3.40.50.150 184 376 3.2E-27 T 28-03-2018 AL549_RS18040 de8cb0bbe1da854fc4ed52442019d011 376 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL549_RS18040 de8cb0bbe1da854fc4ed52442019d011 376 Pfam PF05175 Methyltransferase small domain 200 373 2.0E-52 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AL549_RS18040 de8cb0bbe1da854fc4ed52442019d011 376 SUPERFAMILY SSF53335 193 355 2.71E-29 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS18040 de8cb0bbe1da854fc4ed52442019d011 376 PIRSF PIRSF037565 1 376 4.7E-175 T 28-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL549_RS11680 8dcbe9ea0f48121df32d5ef11f978b14 473 Pfam PF08411 Exonuclease C-terminal 210 469 1.0E-102 T 28-03-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 AL549_RS11680 8dcbe9ea0f48121df32d5ef11f978b14 473 Pfam PF00929 Exonuclease 11 190 2.7E-23 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL549_RS11680 8dcbe9ea0f48121df32d5ef11f978b14 473 SUPERFAMILY SSF53098 7 471 1.24E-135 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS11680 8dcbe9ea0f48121df32d5ef11f978b14 473 Gene3D G3DSA:3.30.420.10 1 199 1.3E-27 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS11680 8dcbe9ea0f48121df32d5ef11f978b14 473 PIRSF PIRSF000977 1 473 4.3E-197 T 28-03-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 AL549_RS23310 fa662d20229f6e236076c4df3988ccea 165 Pfam PF11736 Protein of unknown function (DUF3299) 31 161 7.0E-44 T 28-03-2018 IPR021727 Protein of unknown function DUF3299 AL549_RS18030 39bb7556be645916573fbc415201347a 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 46.222 T 28-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AL549_RS18030 39bb7556be645916573fbc415201347a 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 1.5E-114 T 28-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AL549_RS18030 39bb7556be645916573fbc415201347a 446 Gene3D G3DSA:2.40.50.100 34 88 2.0E-4 T 28-03-2018 AL549_RS18030 39bb7556be645916573fbc415201347a 446 Pfam PF11973 NQRA C-terminal domain 261 310 5.2E-21 T 28-03-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 AL549_RS18030 39bb7556be645916573fbc415201347a 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 8.9E-205 T 28-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AL549_RS20730 fd46f74a26ab0b02f85ade699a2dfc8b 177 PIRSF PIRSF034445 2 166 5.5E-21 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 AL549_RS20730 fd46f74a26ab0b02f85ade699a2dfc8b 177 Pfam PF07813 LTXXQ motif family protein 46 156 2.1E-24 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 AL549_RS15955 d4bd6d03d94f14a59366917bbe008eac 439 SMART SM00267 279 438 1.3E-46 T 28-03-2018 IPR000160 GGDEF domain AL549_RS15955 d4bd6d03d94f14a59366917bbe008eac 439 Gene3D G3DSA:3.30.70.270 280 439 5.3E-44 T 28-03-2018 AL549_RS15955 d4bd6d03d94f14a59366917bbe008eac 439 SUPERFAMILY SSF55073 295 436 1.57E-36 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS15955 d4bd6d03d94f14a59366917bbe008eac 439 Pfam PF00990 Diguanylate cyclase, GGDEF domain 291 434 5.5E-35 T 28-03-2018 IPR000160 GGDEF domain AL549_RS15955 d4bd6d03d94f14a59366917bbe008eac 439 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 287 436 6.9E-39 T 28-03-2018 IPR000160 GGDEF domain AL549_RS12985 6f1afa3c18cb9c62f4ad79faa273ed5f 159 Pfam PF00583 Acetyltransferase (GNAT) family 47 138 3.8E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS12985 6f1afa3c18cb9c62f4ad79faa273ed5f 159 SUPERFAMILY SSF55729 2 141 3.84E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS12985 6f1afa3c18cb9c62f4ad79faa273ed5f 159 Gene3D G3DSA:3.40.630.30 10 155 5.8E-20 T 28-03-2018 AL549_RS01775 e12f5752ca8645e0434bdb36551d6dfc 202 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 7.8E-33 T 28-03-2018 IPR003740 Uncharacterised membrane protein YitT AL549_RS02725 3560b2ee7e977526900e07f13642d9c7 423 SUPERFAMILY SSF56954 4 412 1.02E-76 T 28-03-2018 AL549_RS02725 3560b2ee7e977526900e07f13642d9c7 423 Pfam PF02321 Outer membrane efflux protein 230 407 5.4E-27 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL549_RS02725 3560b2ee7e977526900e07f13642d9c7 423 Pfam PF02321 Outer membrane efflux protein 28 204 1.0E-28 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL549_RS02725 3560b2ee7e977526900e07f13642d9c7 423 Gene3D G3DSA:1.20.1600.10 16 414 8.5E-70 T 28-03-2018 AL549_RS23575 f85b21d6458fcca8172fa8b83d982db8 269 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 269 47.936 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AL549_RS23575 f85b21d6458fcca8172fa8b83d982db8 269 SUPERFAMILY SSF56300 4 257 2.58E-53 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS23575 f85b21d6458fcca8172fa8b83d982db8 269 PIRSF PIRSF000903 1 269 3.4E-122 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AL549_RS23575 f85b21d6458fcca8172fa8b83d982db8 269 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 2 266 1.8E-118 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AL549_RS23575 f85b21d6458fcca8172fa8b83d982db8 269 Gene3D G3DSA:3.60.21.10 3 268 1.4E-44 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS23575 f85b21d6458fcca8172fa8b83d982db8 269 Pfam PF00149 Calcineurin-like phosphoesterase 5 163 4.2E-13 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL549_RS11225 032b8123a60733bba4755a92114feddb 394 PIRSF PIRSF000014 1 394 4.1E-162 T 28-03-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AL549_RS11225 032b8123a60733bba4755a92114feddb 394 SUPERFAMILY SSF48695 13 187 9.53E-61 T 28-03-2018 IPR011031 Multihaem cytochrome AL549_RS11225 032b8123a60733bba4755a92114feddb 394 Gene3D G3DSA:1.10.760.10 322 393 0.057 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS11225 032b8123a60733bba4755a92114feddb 394 Gene3D G3DSA:1.10.3820.10 12 192 9.4E-27 T 28-03-2018 AL549_RS11225 032b8123a60733bba4755a92114feddb 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 5.9E-189 T 28-03-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AL549_RS11225 032b8123a60733bba4755a92114feddb 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 187 1.9E-72 T 28-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AL549_RS11575 77d32ee0c7862cededfaae8237993792 165 SMART SM00448 4 125 3.7E-10 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS11575 77d32ee0c7862cededfaae8237993792 165 SUPERFAMILY SSF52172 1 142 8.11E-20 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS11575 77d32ee0c7862cededfaae8237993792 165 Gene3D G3DSA:3.40.50.2300 1 163 3.8E-16 T 28-03-2018 AL549_RS11575 77d32ee0c7862cededfaae8237993792 165 Pfam PF00072 Response regulator receiver domain 6 126 1.2E-10 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS10770 c5b554863810e61bddc15035737d7809 486 Pfam PF00209 Sodium:neurotransmitter symporter family 3 120 8.8E-41 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS10770 c5b554863810e61bddc15035737d7809 486 Pfam PF00209 Sodium:neurotransmitter symporter family 121 467 3.5E-77 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS10770 c5b554863810e61bddc15035737d7809 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 1.2E-36 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS10770 c5b554863810e61bddc15035737d7809 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 1.2E-36 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS10770 c5b554863810e61bddc15035737d7809 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 1.2E-36 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS10770 c5b554863810e61bddc15035737d7809 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 1.2E-36 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS10770 c5b554863810e61bddc15035737d7809 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 1.2E-36 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS10770 c5b554863810e61bddc15035737d7809 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 1.2E-36 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS10770 c5b554863810e61bddc15035737d7809 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 1.2E-36 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS10770 c5b554863810e61bddc15035737d7809 486 SUPERFAMILY SSF161070 3 474 2.35E-148 T 28-03-2018 AL549_RS10770 c5b554863810e61bddc15035737d7809 486 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL549_RS15140 298b882e7acfb8c4ea424aab712f639b 52 Pfam PF11665 Protein of unknown function (DUF3265) 19 46 9.4E-13 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS16115 38862b38e8d43914d9c6d65dd34e9c99 238 Gene3D G3DSA:3.30.420.10 38 228 1.9E-32 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS16115 38862b38e8d43914d9c6d65dd34e9c99 238 Pfam PF00929 Exonuclease 49 219 2.4E-15 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL549_RS16115 38862b38e8d43914d9c6d65dd34e9c99 238 SMART SM00479 47 228 2.6E-19 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL549_RS16115 38862b38e8d43914d9c6d65dd34e9c99 238 SUPERFAMILY SSF53098 47 226 1.47E-38 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS17035 b3ab3b7bad26dcddbf5228276730c9b7 792 Pfam PF13476 AAA domain 6 217 4.5E-20 T 28-03-2018 AL549_RS17035 b3ab3b7bad26dcddbf5228276730c9b7 792 Gene3D G3DSA:3.40.50.300 1 225 1.4E-16 T 28-03-2018 AL549_RS17035 b3ab3b7bad26dcddbf5228276730c9b7 792 SUPERFAMILY SSF52540 573 761 3.31E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS17035 b3ab3b7bad26dcddbf5228276730c9b7 792 SUPERFAMILY SSF52540 4 223 3.31E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS17035 b3ab3b7bad26dcddbf5228276730c9b7 792 Gene3D G3DSA:3.40.50.300 343 771 1.4E-9 T 28-03-2018 AL549_RS21980 94cc757b4b6b09045e70d3171aba516c 159 Pfam PF04361 Protein of unknown function (DUF494) 2 159 3.5E-59 T 28-03-2018 IPR007456 Smg AL549_RS21980 94cc757b4b6b09045e70d3171aba516c 159 Hamap MF_00598 Protein Smg [smg]. 2 159 32.953 T 28-03-2018 IPR007456 Smg AL549_RS02045 45a9730a4183e936ad8270e0b3519a64 205 SUPERFAMILY SSF52540 3 191 6.4E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS02045 45a9730a4183e936ad8270e0b3519a64 205 ProSitePatterns PS01331 Thymidylate kinase signature. 79 91 - T 28-03-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL549_RS02045 45a9730a4183e936ad8270e0b3519a64 205 Pfam PF02223 Thymidylate kinase 7 182 8.4E-16 T 28-03-2018 AL549_RS02045 45a9730a4183e936ad8270e0b3519a64 205 Gene3D G3DSA:3.40.50.300 2 199 1.9E-20 T 28-03-2018 AL549_RS12415 9ed01360a263c3b278980855ed9da91f 336 PIRSF PIRSF000164 10 336 3.7E-107 T 28-03-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 AL549_RS12415 9ed01360a263c3b278980855ed9da91f 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 8.0E-89 T 28-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AL549_RS12415 9ed01360a263c3b278980855ed9da91f 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 50.626 T 28-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AL549_RS12415 9ed01360a263c3b278980855ed9da91f 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 28-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AL549_RS12415 9ed01360a263c3b278980855ed9da91f 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.4E-145 T 28-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AL549_RS12415 9ed01360a263c3b278980855ed9da91f 336 SUPERFAMILY SSF51395 1 336 9.99E-106 T 28-03-2018 AL549_RS12415 9ed01360a263c3b278980855ed9da91f 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 28-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AL549_RS12415 9ed01360a263c3b278980855ed9da91f 336 Gene3D G3DSA:3.20.20.70 1 336 1.2E-80 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS15075 f2de32fafb476d29df0e158349e66298 162 Gene3D G3DSA:3.40.1800.10 15 109 1.4E-7 T 28-03-2018 AL549_RS16070 48aca24128ba05cd3410f7d81a33556a 466 Gene3D G3DSA:3.30.930.10 128 462 2.6E-91 T 28-03-2018 AL549_RS16070 48aca24128ba05cd3410f7d81a33556a 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.768 T 28-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AL549_RS16070 48aca24128ba05cd3410f7d81a33556a 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 2.7E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS16070 48aca24128ba05cd3410f7d81a33556a 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 2.7E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS16070 48aca24128ba05cd3410f7d81a33556a 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 2.7E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS16070 48aca24128ba05cd3410f7d81a33556a 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 2.7E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS16070 48aca24128ba05cd3410f7d81a33556a 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 3.5E-80 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL549_RS16070 48aca24128ba05cd3410f7d81a33556a 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 1.3E-205 T 28-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AL549_RS16070 48aca24128ba05cd3410f7d81a33556a 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 2.5E-10 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL549_RS16070 48aca24128ba05cd3410f7d81a33556a 466 Gene3D G3DSA:2.40.50.140 8 109 1.2E-17 T 28-03-2018 AL549_RS16070 48aca24128ba05cd3410f7d81a33556a 466 SUPERFAMILY SSF55681 97 464 2.79E-94 T 28-03-2018 AL549_RS16070 48aca24128ba05cd3410f7d81a33556a 466 SUPERFAMILY SSF50249 15 101 6.0E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS20250 b1aa9617d4e7c3a9359a5008310ffd9e 112 Pfam PF11333 Protein of unknown function (DUF3135) 9 89 3.6E-33 T 28-03-2018 IPR021482 Protein of unknown function DUF3135 AL549_RS19335 465391ccc220802bb1f9af46a5997f9d 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 121 134 1.6E-31 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19335 465391ccc220802bb1f9af46a5997f9d 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 185 201 1.6E-31 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19335 465391ccc220802bb1f9af46a5997f9d 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 281 296 1.6E-31 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19335 465391ccc220802bb1f9af46a5997f9d 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 158 176 1.6E-31 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19335 465391ccc220802bb1f9af46a5997f9d 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 241 258 1.6E-31 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19335 465391ccc220802bb1f9af46a5997f9d 346 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 112 2.3E-30 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19335 465391ccc220802bb1f9af46a5997f9d 346 Gene3D G3DSA:3.30.360.10 174 327 4.0E-52 T 28-03-2018 AL549_RS19335 465391ccc220802bb1f9af46a5997f9d 346 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 169 325 7.1E-56 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19335 465391ccc220802bb1f9af46a5997f9d 346 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 337 3.7E-191 T 28-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AL549_RS19335 465391ccc220802bb1f9af46a5997f9d 346 SUPERFAMILY SSF51735 2 188 2.38E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS19335 465391ccc220802bb1f9af46a5997f9d 346 PIRSF PIRSF000149 1 346 2.5E-126 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS19335 465391ccc220802bb1f9af46a5997f9d 346 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 346 66.402 T 28-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AL549_RS19335 465391ccc220802bb1f9af46a5997f9d 346 SUPERFAMILY SSF55347 164 326 2.8E-59 T 28-03-2018 AL549_RS19335 465391ccc220802bb1f9af46a5997f9d 346 Gene3D G3DSA:3.40.50.720 1 173 5.2E-61 T 28-03-2018 AL549_RS19335 465391ccc220802bb1f9af46a5997f9d 346 SMART SM00846 2 164 8.7E-65 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL549_RS02085 495f7f92c6dd6e79787b735e705202de 352 SUPERFAMILY SSF56935 26 350 2.51E-41 T 28-03-2018 AL549_RS02085 495f7f92c6dd6e79787b735e705202de 352 Gene3D G3DSA:2.40.160.10 32 351 1.7E-30 T 28-03-2018 AL549_RS15960 a590465a3649a53c9b2070c892a6c485 158 Gene3D G3DSA:3.40.50.2300 1 141 3.6E-22 T 28-03-2018 AL549_RS15960 a590465a3649a53c9b2070c892a6c485 158 SMART SM00448 4 125 2.6E-15 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS15960 a590465a3649a53c9b2070c892a6c485 158 Pfam PF00072 Response regulator receiver domain 7 125 9.0E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL549_RS15960 a590465a3649a53c9b2070c892a6c485 158 SUPERFAMILY SSF52172 1 133 3.7E-23 T 28-03-2018 IPR011006 CheY-like superfamily AL549_RS00775 604c13a9c9c445c18f06a2e1c9607311 249 Gene3D G3DSA:1.20.144.10 49 232 6.1E-21 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL549_RS00775 604c13a9c9c445c18f06a2e1c9607311 249 SMART SM00014 80 228 7.0E-6 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL549_RS00775 604c13a9c9c445c18f06a2e1c9607311 249 Pfam PF01569 PAP2 superfamily 84 228 8.1E-20 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL549_RS00775 604c13a9c9c445c18f06a2e1c9607311 249 SUPERFAMILY SSF48317 147 232 2.88E-21 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL549_RS00775 604c13a9c9c445c18f06a2e1c9607311 249 SUPERFAMILY SSF48317 17 117 2.88E-21 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL549_RS02080 57f20b9ee453ff78bbe0f36b0fad19a5 247 SMART SM00052 8 244 4.7E-10 T 28-03-2018 IPR001633 EAL domain AL549_RS02080 57f20b9ee453ff78bbe0f36b0fad19a5 247 Gene3D G3DSA:3.20.20.450 17 247 9.8E-43 T 28-03-2018 IPR001633 EAL domain AL549_RS02080 57f20b9ee453ff78bbe0f36b0fad19a5 247 Pfam PF00563 EAL domain 22 243 8.3E-39 T 28-03-2018 IPR001633 EAL domain AL549_RS02080 57f20b9ee453ff78bbe0f36b0fad19a5 247 SUPERFAMILY SSF141868 24 244 7.72E-43 T 28-03-2018 IPR001633 EAL domain AL549_RS23710 4db67df7a0027f19f34589b137223808 360 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 325 1.3E-74 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL549_RS23710 4db67df7a0027f19f34589b137223808 360 Gene3D G3DSA:3.40.190.10 163 343 3.0E-4 T 28-03-2018 AL549_RS23710 4db67df7a0027f19f34589b137223808 360 PIRSF PIRSF039026 5 360 2.4E-133 T 28-03-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like AL549_RS05815 f3348eeda2a3ae6e581ff69b5d8e19b2 204 PIRSF PIRSF020606 4 204 3.2E-84 T 28-03-2018 IPR014509 Uncharacterised conserved protein UCP020606 AL549_RS05815 f3348eeda2a3ae6e581ff69b5d8e19b2 204 Pfam PF09997 Predicted membrane protein (DUF2238) 45 182 5.9E-53 T 28-03-2018 IPR014509 Uncharacterised conserved protein UCP020606 AL549_RS11040 d7145e6c6f1fdae8032b4af7ed401095 430 SUPERFAMILY SSF51905 382 413 2.3E-55 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS11040 d7145e6c6f1fdae8032b4af7ed401095 430 SUPERFAMILY SSF51905 1 299 2.3E-55 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS11040 d7145e6c6f1fdae8032b4af7ed401095 430 Pfam PF01593 Flavin containing amine oxidoreductase 10 297 2.4E-19 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AL549_RS11040 d7145e6c6f1fdae8032b4af7ed401095 430 Gene3D G3DSA:3.90.660.20 43 361 1.3E-31 T 28-03-2018 AL549_RS11040 d7145e6c6f1fdae8032b4af7ed401095 430 Gene3D G3DSA:3.50.50.60 1 42 0.0085 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS05270 090215fe65a2b3b0a1ec87cd3afba6b7 156 Gene3D G3DSA:3.40.630.30 1 75 5.5E-13 T 28-03-2018 AL549_RS05270 090215fe65a2b3b0a1ec87cd3afba6b7 156 SUPERFAMILY SSF55729 1 142 2.62E-28 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS05270 090215fe65a2b3b0a1ec87cd3afba6b7 156 Pfam PF00583 Acetyltransferase (GNAT) family 39 124 1.9E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS05270 090215fe65a2b3b0a1ec87cd3afba6b7 156 Gene3D G3DSA:3.40.630.30 76 141 2.0E-16 T 28-03-2018 AL549_RS07060 943b9fb57b13a95aea957ec2aeab2257 367 Gene3D G3DSA:3.40.640.10 16 254 4.3E-31 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS07060 943b9fb57b13a95aea957ec2aeab2257 367 Gene3D G3DSA:3.90.1150.10 255 365 2.0E-30 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS07060 943b9fb57b13a95aea957ec2aeab2257 367 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 367 213.424 T 28-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AL549_RS07060 943b9fb57b13a95aea957ec2aeab2257 367 Pfam PF00266 Aminotransferase class-V 36 313 5.3E-30 T 28-03-2018 IPR000192 Aminotransferase class V domain AL549_RS07060 943b9fb57b13a95aea957ec2aeab2257 367 SUPERFAMILY SSF53383 3 362 3.78E-87 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS07060 943b9fb57b13a95aea957ec2aeab2257 367 PIRSF PIRSF000524 1 365 1.4E-57 T 28-03-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 AL549_RS07060 943b9fb57b13a95aea957ec2aeab2257 367 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 2 365 1.3E-201 T 28-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AL549_RS07060 943b9fb57b13a95aea957ec2aeab2257 367 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 6 362 3.0E-170 T 28-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AL549_RS05085 2d701824f094a34ef0499753156a2f7b 170 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 162 1.1E-60 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL549_RS05085 2d701824f094a34ef0499753156a2f7b 170 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 9 161 3.1E-61 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL549_RS05085 2d701824f094a34ef0499753156a2f7b 170 PIRSF PIRSF028301 1 170 6.7E-66 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL549_RS06855 77b4c11e0e4235551f6f0e27a76d5e41 129 Gene3D G3DSA:3.40.250.10 35 129 5.2E-24 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS06855 77b4c11e0e4235551f6f0e27a76d5e41 129 Pfam PF00581 Rhodanese-like domain 40 117 6.9E-16 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS06855 77b4c11e0e4235551f6f0e27a76d5e41 129 SUPERFAMILY SSF52821 13 124 3.67E-27 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS06855 77b4c11e0e4235551f6f0e27a76d5e41 129 SMART SM00450 34 128 4.7E-21 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS20380 63a4f6cd497fede8795dcb0262ee5949 70 SUPERFAMILY SSF118001 1 70 1.44E-28 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 AL549_RS20380 63a4f6cd497fede8795dcb0262ee5949 70 PIRSF PIRSF006169 1 70 2.6E-36 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 AL549_RS20380 63a4f6cd497fede8795dcb0262ee5949 70 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.109 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 AL549_RS20380 63a4f6cd497fede8795dcb0262ee5949 70 Gene3D G3DSA:1.10.10.610 1 70 6.7E-34 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 AL549_RS20380 63a4f6cd497fede8795dcb0262ee5949 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 2.5E-34 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 AL549_RS20380 63a4f6cd497fede8795dcb0262ee5949 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 53 4.0E-24 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 AL549_RS18200 39c268522e6365036a0a14fd8f77facf 394 Pfam PF05940 NnrS protein 16 388 1.3E-105 T 28-03-2018 IPR010266 NnrS AL549_RS03880 969ae34c697ce83cde84aba44fd873fd 221 Gene3D G3DSA:2.30.110.10 1 182 5.6E-35 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL549_RS03880 969ae34c697ce83cde84aba44fd873fd 221 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 20 162 2.8E-39 T 28-03-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related AL549_RS03880 969ae34c697ce83cde84aba44fd873fd 221 SUPERFAMILY SSF50475 2 184 8.84E-52 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL549_RS04995 f23aff25309da8acc6ebb2a2f0591212 263 Gene3D G3DSA:1.10.800.10 1 248 3.3E-90 T 28-03-2018 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 AL549_RS04995 f23aff25309da8acc6ebb2a2f0591212 263 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 11 251 9.7E-97 T 28-03-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 AL549_RS04995 f23aff25309da8acc6ebb2a2f0591212 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 2.2E-9 T 28-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AL549_RS04995 f23aff25309da8acc6ebb2a2f0591212 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 2.2E-9 T 28-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AL549_RS04995 f23aff25309da8acc6ebb2a2f0591212 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 2.2E-9 T 28-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AL549_RS04995 f23aff25309da8acc6ebb2a2f0591212 263 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 28-03-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 AL549_RS04995 f23aff25309da8acc6ebb2a2f0591212 263 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 14 228 1.4E-46 T 28-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AL549_RS04995 f23aff25309da8acc6ebb2a2f0591212 263 SUPERFAMILY SSF56534 3 247 1.83E-96 T 28-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AL549_RS08310 171e21654729fbae6786093a299d152e 294 Gene3D G3DSA:3.30.980.10 122 288 4.7E-19 T 28-03-2018 AL549_RS08310 171e21654729fbae6786093a299d152e 294 SUPERFAMILY SSF55186 122 272 1.14E-11 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.9E-38 T 28-03-2018 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.9E-38 T 28-03-2018 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.9E-38 T 28-03-2018 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.9E-38 T 28-03-2018 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.9E-38 T 28-03-2018 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 3.2E-75 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 3.2E-75 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 3.2E-75 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 3.2E-75 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 3.2E-75 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 3.2E-75 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 3.2E-75 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 3.2E-75 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 3.2E-75 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 Gene3D G3DSA:3.50.50.60 2 137 5.0E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 SUPERFAMILY SSF51905 4 313 5.65E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 2.9E-123 T 28-03-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 4.8E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 Gene3D G3DSA:3.40.50.720 144 318 9.9E-23 T 28-03-2018 AL549_RS11605 0ba974a77feeb02f679f517d1e32c016 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 28-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AL549_RS21790 bac15505f79bee19563dd39dfaa0c3e4 211 SUPERFAMILY SSF53335 7 209 9.73E-42 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS21790 bac15505f79bee19563dd39dfaa0c3e4 211 Pfam PF02527 rRNA small subunit methyltransferase G 24 204 3.8E-64 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL549_RS21790 bac15505f79bee19563dd39dfaa0c3e4 211 Gene3D G3DSA:3.40.50.150 4 211 3.6E-39 T 28-03-2018 AL549_RS21790 bac15505f79bee19563dd39dfaa0c3e4 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 3.0E-58 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL549_RS21790 bac15505f79bee19563dd39dfaa0c3e4 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.83 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL549_RS21790 bac15505f79bee19563dd39dfaa0c3e4 211 PIRSF PIRSF003078 1 211 4.7E-60 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL549_RS22085 858e14cae603a67fa1df044720678cd6 278 SUPERFAMILY SSF69572 4 264 2.88E-70 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL549_RS22085 858e14cae603a67fa1df044720678cd6 278 Gene3D G3DSA:3.40.50.720 1 266 1.5E-62 T 28-03-2018 AL549_RS22085 858e14cae603a67fa1df044720678cd6 278 Pfam PF00899 ThiF family 10 261 1.7E-55 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL549_RS01525 1360b173d478c188bd60ef558ece1ee0 285 Gene3D G3DSA:3.40.30.10 44 144 2.1E-23 T 28-03-2018 AL549_RS01525 1360b173d478c188bd60ef558ece1ee0 285 SUPERFAMILY SSF52833 38 130 4.19E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS01525 1360b173d478c188bd60ef558ece1ee0 285 Pfam PF13410 Glutathione S-transferase, C-terminal domain 176 242 5.2E-11 T 28-03-2018 AL549_RS01525 1360b173d478c188bd60ef558ece1ee0 285 Pfam PF02798 Glutathione S-transferase, N-terminal domain 44 126 1.3E-6 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL549_RS01525 1360b173d478c188bd60ef558ece1ee0 285 SUPERFAMILY SSF47616 132 278 1.27E-33 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL549_RS01525 1360b173d478c188bd60ef558ece1ee0 285 Gene3D G3DSA:1.20.1050.10 145 284 3.1E-29 T 28-03-2018 AL549_RS17770 bbe9343961c80af36ea0eaecca15d4b0 207 Gene3D G3DSA:3.30.420.10 2 207 4.1E-73 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS17770 bbe9343961c80af36ea0eaecca15d4b0 207 Hamap MF_00052_B Ribonuclease HII [rnhB]. 20 199 37.919 T 28-03-2018 IPR022898 Ribonuclease HII GO:0004523 AL549_RS17770 bbe9343961c80af36ea0eaecca15d4b0 207 SUPERFAMILY SSF53098 14 204 1.67E-71 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL549_RS17770 bbe9343961c80af36ea0eaecca15d4b0 207 Pfam PF01351 Ribonuclease HII 22 198 6.5E-40 T 28-03-2018 IPR024567 Ribonuclease HII/HIII domain AL549_RS02800 e182f3b46678c1112222989b8b2efa86 463 SUPERFAMILY SSF55874 292 454 3.54E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS02800 e182f3b46678c1112222989b8b2efa86 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 302 1.1E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS02800 e182f3b46678c1112222989b8b2efa86 463 Gene3D G3DSA:1.10.287.130 227 299 7.5E-12 T 28-03-2018 AL549_RS02800 e182f3b46678c1112222989b8b2efa86 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 455 5.1E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS02800 e182f3b46678c1112222989b8b2efa86 463 SMART SM00387 346 458 1.7E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS02800 e182f3b46678c1112222989b8b2efa86 463 SUPERFAMILY SSF47384 220 302 9.02E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS02800 e182f3b46678c1112222989b8b2efa86 463 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 17 454 1.9E-115 T 28-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 AL549_RS02800 e182f3b46678c1112222989b8b2efa86 463 SMART SM00304 183 236 4.0E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS02800 e182f3b46678c1112222989b8b2efa86 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 411 4.3E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS02800 e182f3b46678c1112222989b8b2efa86 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 4.3E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS02800 e182f3b46678c1112222989b8b2efa86 463 SMART SM00388 237 303 3.1E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS02800 e182f3b46678c1112222989b8b2efa86 463 Gene3D G3DSA:3.30.565.10 305 455 8.6E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS22185 e8ae595b369e5858594b09431b90aa20 223 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 13 204 4.6E-62 T 28-03-2018 IPR003744 Queuosine precursor transporter AL549_RS22185 e8ae595b369e5858594b09431b90aa20 223 Pfam PF02592 Putative vitamin uptake transporter 43 199 4.2E-38 T 28-03-2018 IPR003744 Queuosine precursor transporter AL549_RS21245 04638a8c43fc4c3fdd9fdc4907927f56 405 Gene3D G3DSA:1.20.1250.20 5 203 8.1E-16 T 28-03-2018 AL549_RS21245 04638a8c43fc4c3fdd9fdc4907927f56 405 SUPERFAMILY SSF103473 9 399 5.75E-34 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS21245 04638a8c43fc4c3fdd9fdc4907927f56 405 Gene3D G3DSA:1.20.1250.20 204 404 4.5E-14 T 28-03-2018 AL549_RS21245 04638a8c43fc4c3fdd9fdc4907927f56 405 Pfam PF07690 Major Facilitator Superfamily 19 276 3.2E-16 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS23395 553e5f9af4f6e2c7750b8323df38ec2e 535 Gene3D G3DSA:1.10.3720.10 38 259 3.2E-27 T 28-03-2018 AL549_RS23395 553e5f9af4f6e2c7750b8323df38ec2e 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 65 257 5.5E-7 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS23395 553e5f9af4f6e2c7750b8323df38ec2e 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 364 512 3.5E-6 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS23395 553e5f9af4f6e2c7750b8323df38ec2e 535 SUPERFAMILY SSF161098 15 257 1.44E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS23395 553e5f9af4f6e2c7750b8323df38ec2e 535 SUPERFAMILY SSF161098 278 518 1.96E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS23395 553e5f9af4f6e2c7750b8323df38ec2e 535 Gene3D G3DSA:1.10.3720.10 281 531 8.6E-23 T 28-03-2018 AL549_RS23395 553e5f9af4f6e2c7750b8323df38ec2e 535 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 516 3.1E-160 T 28-03-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 AL549_RS12845 b3b4a256cf1b76dc92a16e4bd32b2193 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 3.7E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS05080 92c29589a48f0c2e9fd1231048965afb 377 Pfam PF06812 ImpA, N-terminal, type VI secretion system 16 144 2.4E-30 T 28-03-2018 IPR010657 ImpA, N-terminal AL549_RS05080 92c29589a48f0c2e9fd1231048965afb 377 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 12 371 7.6E-78 T 28-03-2018 IPR017740 Type VI secretion system-associated, ImpA AL549_RS03620 222a82c4f5255c0c8713dbc7331e1f48 262 Gene3D G3DSA:3.40.50.720 51 262 3.0E-57 T 28-03-2018 AL549_RS03620 222a82c4f5255c0c8713dbc7331e1f48 262 Gene3D G3DSA:3.40.50.720 1 50 2.1E-8 T 28-03-2018 AL549_RS03620 222a82c4f5255c0c8713dbc7331e1f48 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL549_RS03620 222a82c4f5255c0c8713dbc7331e1f48 262 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 11 261 6.4E-111 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AL549_RS03620 222a82c4f5255c0c8713dbc7331e1f48 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 212 231 8.1E-60 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AL549_RS03620 222a82c4f5255c0c8713dbc7331e1f48 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 15 32 8.1E-60 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AL549_RS03620 222a82c4f5255c0c8713dbc7331e1f48 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 173 196 8.1E-60 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AL549_RS03620 222a82c4f5255c0c8713dbc7331e1f48 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 88 105 8.1E-60 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AL549_RS03620 222a82c4f5255c0c8713dbc7331e1f48 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 238 257 8.1E-60 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AL549_RS03620 222a82c4f5255c0c8713dbc7331e1f48 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 108 128 8.1E-60 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AL549_RS03620 222a82c4f5255c0c8713dbc7331e1f48 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 259 4.7E-55 T 28-03-2018 AL549_RS03620 222a82c4f5255c0c8713dbc7331e1f48 262 SUPERFAMILY SSF51735 8 260 1.85E-68 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS07465 3752a24761f0f02e50a3d90906e7b6a8 211 SUPERFAMILY SSF47616 82 208 2.42E-24 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL549_RS07465 3752a24761f0f02e50a3d90906e7b6a8 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 8.9E-17 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL549_RS07465 3752a24761f0f02e50a3d90906e7b6a8 211 Gene3D G3DSA:1.20.1050.10 89 209 7.3E-15 T 28-03-2018 AL549_RS07465 3752a24761f0f02e50a3d90906e7b6a8 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 194 5.8E-7 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL549_RS07465 3752a24761f0f02e50a3d90906e7b6a8 211 Gene3D G3DSA:3.40.30.10 1 88 1.1E-22 T 28-03-2018 AL549_RS07465 3752a24761f0f02e50a3d90906e7b6a8 211 SUPERFAMILY SSF52833 11 110 8.42E-22 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS14995 5d9ad2a163785fa484a11a1cf5d4113f 40 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 7.2E-12 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS11945 30716be821a368a95f6de924b70da162 323 PIRSF PIRSF017082 2 323 3.3E-85 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL549_RS11945 30716be821a368a95f6de924b70da162 323 SUPERFAMILY SSF53850 111 289 1.71E-8 T 28-03-2018 AL549_RS11945 30716be821a368a95f6de924b70da162 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 66 320 9.8E-26 T 28-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL549_RS11945 30716be821a368a95f6de924b70da162 323 Gene3D G3DSA:3.40.190.10 120 228 2.5E-13 T 28-03-2018 AL549_RS15975 95ad599af4f2c2bc234f1f3d7e5419f8 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 9.7E-72 T 28-03-2018 IPR021334 Protein of unknown function DUF2947 AL549_RS11475 28d54ca1bfb1727b35064a29d190e62b 246 Pfam PF11140 Protein of unknown function (DUF2913) 29 240 4.2E-85 T 28-03-2018 IPR021316 Protein of unknown function DUF2913 AL549_RS12865 01f82500051191b1fcabada6be60a26a 35 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 2.7E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS19850 facd71d1bb2ab76a2fccd2dd3c780beb 486 Gene3D G3DSA:3.90.20.10 208 418 1.7E-5 T 28-03-2018 AL549_RS19850 facd71d1bb2ab76a2fccd2dd3c780beb 486 PIRSF PIRSF028153 1 486 1.9E-235 T 28-03-2018 IPR016871 MSHA biogenesis protein, MshI AL549_RS19850 facd71d1bb2ab76a2fccd2dd3c780beb 486 SUPERFAMILY SSF53067 57 159 4.53E-10 T 28-03-2018 AL549_RS00570 331fae089be6979f14434781f6964bf2 413 Gene3D G3DSA:1.20.1250.20 7 203 1.2E-28 T 28-03-2018 AL549_RS00570 331fae089be6979f14434781f6964bf2 413 SUPERFAMILY SSF103473 13 404 7.85E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS00570 331fae089be6979f14434781f6964bf2 413 Pfam PF07690 Major Facilitator Superfamily 23 354 1.9E-37 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS00570 331fae089be6979f14434781f6964bf2 413 Gene3D G3DSA:1.20.1250.20 211 412 3.2E-19 T 28-03-2018 AL549_RS00570 331fae089be6979f14434781f6964bf2 413 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 90 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL549_RS01330 6760e1fe5fb9ffcf6602f26f2e1b803b 182 Gene3D G3DSA:3.40.630.30 9 181 1.2E-9 T 28-03-2018 AL549_RS01330 6760e1fe5fb9ffcf6602f26f2e1b803b 182 SUPERFAMILY SSF55729 23 159 3.67E-10 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS01330 6760e1fe5fb9ffcf6602f26f2e1b803b 182 Pfam PF13673 Acetyltransferase (GNAT) domain 98 157 1.3E-5 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS10195 419a65b84ba1eac2b9dd1e5ccfa46264 179 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 33 2.9E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS10195 419a65b84ba1eac2b9dd1e5ccfa46264 179 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS10195 419a65b84ba1eac2b9dd1e5ccfa46264 179 SUPERFAMILY SSF54523 14 148 9.42E-14 T 28-03-2018 AL549_RS10195 419a65b84ba1eac2b9dd1e5ccfa46264 179 Gene3D G3DSA:3.30.700.10 14 176 1.4E-17 T 28-03-2018 AL549_RS10195 419a65b84ba1eac2b9dd1e5ccfa46264 179 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 34 2.5E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS01715 3ca1b99271745e7e780394490d52ccdd 398 SUPERFAMILY SSF55073 196 363 1.18E-39 T 28-03-2018 IPR029787 Nucleotide cyclase AL549_RS01715 3ca1b99271745e7e780394490d52ccdd 398 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 358 2.1E-39 T 28-03-2018 IPR000160 GGDEF domain AL549_RS01715 3ca1b99271745e7e780394490d52ccdd 398 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 361 3.6E-40 T 28-03-2018 IPR000160 GGDEF domain AL549_RS01715 3ca1b99271745e7e780394490d52ccdd 398 Gene3D G3DSA:3.30.70.270 185 374 9.2E-47 T 28-03-2018 AL549_RS01715 3ca1b99271745e7e780394490d52ccdd 398 SMART SM00267 180 362 4.9E-48 T 28-03-2018 IPR000160 GGDEF domain AL549_RS03760 9971ce865883732bc25e31d5a57f44c1 215 Pfam PF07819 PGAP1-like protein 60 166 4.8E-6 T 28-03-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 AL549_RS03760 9971ce865883732bc25e31d5a57f44c1 215 SUPERFAMILY SSF53474 8 194 9.54E-16 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS03760 9971ce865883732bc25e31d5a57f44c1 215 Gene3D G3DSA:3.40.50.1820 2 214 1.7E-10 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS06760 6632c1be5dc2985eb94f07ccea4ab11a 213 Pfam PF01852 START domain 23 205 3.9E-11 T 28-03-2018 IPR002913 START domain GO:0008289 AL549_RS06760 6632c1be5dc2985eb94f07ccea4ab11a 213 PIRSF PIRSF039033 2 213 3.6E-65 T 28-03-2018 IPR028347 START domain-containing protein AL549_RS06760 6632c1be5dc2985eb94f07ccea4ab11a 213 Gene3D G3DSA:3.30.530.20 16 209 3.5E-32 T 28-03-2018 IPR023393 START-like domain AL549_RS06760 6632c1be5dc2985eb94f07ccea4ab11a 213 SUPERFAMILY SSF55961 19 203 4.12E-40 T 28-03-2018 AL549_RS20300 5ffbb7826d3b77841f4d614d00008e61 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.98 T 28-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20300 5ffbb7826d3b77841f4d614d00008e61 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS20300 5ffbb7826d3b77841f4d614d00008e61 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.5E-42 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS20300 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.7E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS20300 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.7E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS20300 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.7E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS20300 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.7E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS20300 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.7E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS20300 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.7E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS20300 5ffbb7826d3b77841f4d614d00008e61 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.3E-71 T 28-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS20300 5ffbb7826d3b77841f4d614d00008e61 124 SUPERFAMILY SSF50249 3 123 2.4E-52 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL549_RS20300 5ffbb7826d3b77841f4d614d00008e61 124 Gene3D G3DSA:2.40.50.140 1 124 2.2E-64 T 28-03-2018 AL549_RS20300 5ffbb7826d3b77841f4d614d00008e61 124 PIRSF PIRSF002133 1 124 2.2E-54 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS15985 7714057e5eddc6dcfe1ed69a81924a41 191 SUPERFAMILY SSF55729 8 183 2.75E-40 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS15985 7714057e5eddc6dcfe1ed69a81924a41 191 Pfam PF13302 Acetyltransferase (GNAT) domain 15 158 4.3E-21 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS15985 7714057e5eddc6dcfe1ed69a81924a41 191 Gene3D G3DSA:3.40.630.30 9 191 1.7E-25 T 28-03-2018 AL549_RS07025 a0053c67a728211325d43cc51d033007 490 Gene3D G3DSA:3.50.50.60 40 468 1.4E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS07025 a0053c67a728211325d43cc51d033007 490 SUPERFAMILY SSF51905 39 146 6.62E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS07025 a0053c67a728211325d43cc51d033007 490 SUPERFAMILY SSF51905 201 331 6.62E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL549_RS07025 a0053c67a728211325d43cc51d033007 490 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 28 488 3.7E-237 T 28-03-2018 IPR017715 Putative aminophosphonate oxidoreductase AL549_RS07025 a0053c67a728211325d43cc51d033007 490 Pfam PF01266 FAD dependent oxidoreductase 53 417 2.8E-47 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL549_RS02445 7b58e7de0ce074c93d108d9d06f3a516 395 Gene3D G3DSA:3.20.20.150 1 394 8.7E-110 T 28-03-2018 AL549_RS02445 7b58e7de0ce074c93d108d9d06f3a516 395 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 389 4.8E-156 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AL549_RS02445 7b58e7de0ce074c93d108d9d06f3a516 395 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 395 223.096 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AL549_RS02445 7b58e7de0ce074c93d108d9d06f3a516 395 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 394 8.2E-213 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AL549_RS02445 7b58e7de0ce074c93d108d9d06f3a516 395 SUPERFAMILY SSF51658 1 384 3.93E-79 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL549_RS02445 7b58e7de0ce074c93d108d9d06f3a516 395 PIRSF PIRSF016049 1 394 1.1E-176 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AL549_RS08320 f4e76350f7663a1f48b0b08b46407c6f 76 Gene3D G3DSA:2.10.290.10 2 71 5.7E-6 T 28-03-2018 AL549_RS08320 f4e76350f7663a1f48b0b08b46407c6f 76 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 5 68 6.0E-31 T 28-03-2018 IPR010807 Protein of unknown function DUF1407 AL549_RS08320 f4e76350f7663a1f48b0b08b46407c6f 76 SUPERFAMILY SSF161187 3 70 4.97E-27 T 28-03-2018 IPR029037 YfgJ-like AL549_RS08320 f4e76350f7663a1f48b0b08b46407c6f 76 Pfam PF07191 zinc-ribbons 5 68 1.5E-27 T 28-03-2018 IPR010807 Protein of unknown function DUF1407 AL549_RS01835 f16bbc18773d4ff2f053ae6350cc89aa 408 Pfam PF03616 Sodium/glutamate symporter 6 376 1.4E-154 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL549_RS01835 f16bbc18773d4ff2f053ae6350cc89aa 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 24.207 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL549_RS01835 f16bbc18773d4ff2f053ae6350cc89aa 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 9 407 7.4E-137 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL549_RS14360 a1e3c451e9d37a050bfbe8ab6a765df5 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.3E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS18000 b1ca2a0b119770c414895b8210fbcddf 335 Gene3D G3DSA:3.10.520.10 31 326 2.1E-62 T 28-03-2018 AL549_RS18000 b1ca2a0b119770c414895b8210fbcddf 335 SUPERFAMILY SSF143631 23 332 6.28E-100 T 28-03-2018 IPR003374 ApbE-like domain AL549_RS18000 b1ca2a0b119770c414895b8210fbcddf 335 Pfam PF02424 ApbE family 31 308 2.7E-85 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 AL549_RS18000 b1ca2a0b119770c414895b8210fbcddf 335 PIRSF PIRSF006268 1 333 8.3E-95 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 AL549_RS12040 ba6a0902bfb2fe6f000538cc32c39cf7 208 Pfam PF00691 OmpA family 85 180 2.1E-17 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS12040 ba6a0902bfb2fe6f000538cc32c39cf7 208 Gene3D G3DSA:3.30.1330.60 95 208 3.8E-28 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS12040 ba6a0902bfb2fe6f000538cc32c39cf7 208 Gene3D G3DSA:4.10.1080.10 13 94 6.7E-6 T 28-03-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AL549_RS12040 ba6a0902bfb2fe6f000538cc32c39cf7 208 SUPERFAMILY SSF103088 55 184 2.09E-29 T 28-03-2018 IPR006665 OmpA-like domain AL549_RS12040 ba6a0902bfb2fe6f000538cc32c39cf7 208 PRINTS PR01021 OMPA domain signature 131 147 1.4E-7 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS12040 ba6a0902bfb2fe6f000538cc32c39cf7 208 PRINTS PR01021 OMPA domain signature 86 108 1.4E-7 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS12040 ba6a0902bfb2fe6f000538cc32c39cf7 208 PRINTS PR01021 OMPA domain signature 116 131 1.4E-7 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL549_RS04670 657e8dc2f9377e68ef7b9d1e3231aea5 157 Gene3D G3DSA:1.10.287.460 14 46 2.0E-6 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AL549_RS04670 657e8dc2f9377e68ef7b9d1e3231aea5 157 SUPERFAMILY SSF54534 16 156 5.3E-50 T 28-03-2018 AL549_RS04670 657e8dc2f9377e68ef7b9d1e3231aea5 157 Gene3D G3DSA:3.10.50.40 47 157 1.8E-42 T 28-03-2018 AL549_RS04670 657e8dc2f9377e68ef7b9d1e3231aea5 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 66 154 4.9E-27 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL549_RS04670 657e8dc2f9377e68ef7b9d1e3231aea5 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 24 59 7.7E-11 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AL549_RS03945 6997d5a07e12dbce119f5146b92b0432 350 Gene3D G3DSA:2.40.160.10 21 350 2.1E-28 T 28-03-2018 AL549_RS03945 6997d5a07e12dbce119f5146b92b0432 350 SUPERFAMILY SSF56935 25 350 1.98E-32 T 28-03-2018 AL549_RS02990 d5b1bab0670d35bcf7f66f8a74614cdd 114 Gene3D G3DSA:1.10.196.10 52 113 0.0017 T 28-03-2018 IPR024066 RGS, subdomain 1 AL549_RS19435 a5ce5482105d5ef3401181b8f53af45e 389 SMART SM00729 6 227 2.0E-56 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL549_RS19435 a5ce5482105d5ef3401181b8f53af45e 389 Gene3D G3DSA:3.20.20.70 3 317 2.9E-47 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL549_RS19435 a5ce5482105d5ef3401181b8f53af45e 389 Pfam PF06969 HemN C-terminal domain 314 374 2.2E-7 T 28-03-2018 IPR010723 HemN, C-terminal AL549_RS19435 a5ce5482105d5ef3401181b8f53af45e 389 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 8.3E-137 T 28-03-2018 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 AL549_RS19435 a5ce5482105d5ef3401181b8f53af45e 389 SUPERFAMILY SSF102114 4 386 7.85E-111 T 28-03-2018 AL549_RS19435 a5ce5482105d5ef3401181b8f53af45e 389 Pfam PF04055 Radical SAM superfamily 11 181 1.0E-18 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL549_RS15910 c5dd7e89ba2704bc8c7a2c6f9f48dcac 200 Gene3D G3DSA:2.60.120.620 5 194 6.9E-33 T 28-03-2018 AL549_RS15910 c5dd7e89ba2704bc8c7a2c6f9f48dcac 200 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 97 187 2.4E-20 T 28-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AL549_RS15910 c5dd7e89ba2704bc8c7a2c6f9f48dcac 200 SMART SM00702 11 187 1.0E-25 T 28-03-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AL549_RS13420 0c19515fa1c98bd1ea19b81967eabfb0 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.0E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS09990 0d69f50a58c012c4bf8b50a434ae64eb 193 Gene3D G3DSA:2.40.160.20 5 193 2.9E-14 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS09990 0d69f50a58c012c4bf8b50a434ae64eb 193 Pfam PF13505 Outer membrane protein beta-barrel domain 7 193 5.1E-15 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel AL549_RS09990 0d69f50a58c012c4bf8b50a434ae64eb 193 SUPERFAMILY SSF56925 29 191 2.56E-11 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS12895 6b0e37abebd5315ad608b96d1672cf20 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 4.9E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS12745 74eedb474d6ea7b052b400ce285b0092 268 Pfam PF04116 Fatty acid hydroxylase superfamily 93 229 6.5E-25 T 28-03-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AL549_RS06975 4413263c522639df05faeecfb4697b01 221 Pfam PF01551 Peptidase family M23 84 179 1.8E-18 T 28-03-2018 IPR016047 Peptidase M23 AL549_RS06975 4413263c522639df05faeecfb4697b01 221 Gene3D G3DSA:2.70.70.10 24 215 2.1E-24 T 28-03-2018 AL549_RS06975 4413263c522639df05faeecfb4697b01 221 SUPERFAMILY SSF51261 57 179 6.28E-22 T 28-03-2018 IPR011055 Duplicated hybrid motif AL549_RS02760 40b437613c2e1d81073da8a2b79e8c71 351 Gene3D G3DSA:3.60.60.10 1 347 7.9E-65 T 28-03-2018 AL549_RS02760 40b437613c2e1d81073da8a2b79e8c71 351 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 4 301 4.9E-31 T 28-03-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal AL549_RS02760 40b437613c2e1d81073da8a2b79e8c71 351 SUPERFAMILY SSF56235 4 321 1.77E-57 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL549_RS10055 88c21551db8123f5ac613fbb75bb7185 158 Gene3D G3DSA:3.40.190.10 6 145 2.8E-4 T 28-03-2018 AL549_RS00760 643837010ca61ca848902329aa5799cc 172 Pfam PF11286 Protein of unknown function (DUF3087) 2 169 2.2E-58 T 28-03-2018 IPR021438 Protein of unknown function DUF3087 AL549_RS10380 4913c8bf3f13cecc92fe26505ad27e67 130 PIRSF PIRSF007010 1 130 1.2E-55 T 28-03-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein AL549_RS10380 4913c8bf3f13cecc92fe26505ad27e67 130 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 15 128 5.8E-49 T 28-03-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein AL549_RS06315 0888b86b8bfabfbed1ac99af0be0212b 118 Pfam PF11225 Protein of unknown function (DUF3024) 60 118 4.3E-18 T 28-03-2018 IPR021388 Bacteriophage 933W, L0084 AL549_RS13650 d07ed55234a4f8eb200b44e530ac7119 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 7.0E-18 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS13580 d07ed55234a4f8eb200b44e530ac7119 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 7.0E-18 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS03595 a15bee330da47be60f2cf56e4635611b 109 SMART SM00830 17 96 8.7E-25 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL549_RS03595 a15bee330da47be60f2cf56e4635611b 109 SUPERFAMILY SSF48600 5 97 2.44E-26 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL549_RS03595 a15bee330da47be60f2cf56e4635611b 109 TIGRFAM TIGR01803 CM-like: chorismate mutase related enzymes 13 93 4.7E-26 T 28-03-2018 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL549_RS03595 a15bee330da47be60f2cf56e4635611b 109 PIRSF PIRSF029775 1 104 1.8E-43 T 28-03-2018 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL549_RS03595 a15bee330da47be60f2cf56e4635611b 109 Gene3D G3DSA:1.20.59.10 4 101 4.5E-23 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL549_RS03595 a15bee330da47be60f2cf56e4635611b 109 Pfam PF01817 Chorismate mutase type II 17 93 9.0E-17 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL549_RS13330 fae8bb75f143e2c3b1b05033ddfe3a74 44 Pfam PF11665 Protein of unknown function (DUF3265) 17 44 8.6E-13 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS04255 d4612dfd1db8f1761044b765ae7c85a7 442 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 181 405 7.3E-10 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS04255 d4612dfd1db8f1761044b765ae7c85a7 442 SUPERFAMILY SSF56219 175 440 8.51E-64 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS04255 d4612dfd1db8f1761044b765ae7c85a7 442 Gene3D G3DSA:3.60.10.10 175 441 4.9E-32 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL549_RS02485 7797aa83a70e227ab959883a665cee41 288 SUPERFAMILY SSF53850 96 283 1.5E-18 T 28-03-2018 AL549_RS02485 7797aa83a70e227ab959883a665cee41 288 Gene3D G3DSA:1.10.10.10 2 86 3.3E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02485 7797aa83a70e227ab959883a665cee41 288 Gene3D G3DSA:3.40.190.10 93 191 4.4E-11 T 28-03-2018 AL549_RS02485 7797aa83a70e227ab959883a665cee41 288 Pfam PF03466 LysR substrate binding domain 96 278 6.7E-18 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS02485 7797aa83a70e227ab959883a665cee41 288 SUPERFAMILY SSF46785 5 84 1.92E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02485 7797aa83a70e227ab959883a665cee41 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.0E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS02835 1b965d0923f786a95e64f93081c6808a 336 Gene3D G3DSA:3.40.190.10 156 328 4.6E-42 T 28-03-2018 AL549_RS02835 1b965d0923f786a95e64f93081c6808a 336 Gene3D G3DSA:3.40.190.10 24 155 5.7E-15 T 28-03-2018 AL549_RS02835 1b965d0923f786a95e64f93081c6808a 336 Pfam PF16868 NMT1-like family 32 326 1.2E-109 T 28-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL549_RS02835 1b965d0923f786a95e64f93081c6808a 336 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 326 3.4E-102 T 28-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL549_RS02835 1b965d0923f786a95e64f93081c6808a 336 SUPERFAMILY SSF53850 29 327 5.26E-63 T 28-03-2018 AL549_RS14110 3f552582c3a1227762513a6b3285901c 246 SUPERFAMILY SSF55729 125 201 4.18E-9 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS14110 3f552582c3a1227762513a6b3285901c 246 Pfam PF12746 GNAT acetyltransferase 121 214 2.3E-9 T 28-03-2018 IPR027365 GNAT acetyltransferase YdfB-like AL549_RS14110 3f552582c3a1227762513a6b3285901c 246 Gene3D G3DSA:3.40.630.30 76 216 2.6E-10 T 28-03-2018 AL549_RS02550 eba02e131ff0b2bc0897574fa206f37b 659 SUPERFAMILY SSF58104 350 659 3.92E-72 T 28-03-2018 AL549_RS02550 eba02e131ff0b2bc0897574fa206f37b 659 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 442 625 1.4E-43 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS02550 eba02e131ff0b2bc0897574fa206f37b 659 Gene3D G3DSA:1.10.287.950 312 425 4.0E-4 T 28-03-2018 AL549_RS02550 eba02e131ff0b2bc0897574fa206f37b 659 Gene3D G3DSA:1.20.120.570 26 140 0.0063 T 28-03-2018 AL549_RS02550 eba02e131ff0b2bc0897574fa206f37b 659 SMART SM00283 397 658 2.9E-77 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS02550 eba02e131ff0b2bc0897574fa206f37b 659 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 131 1.7E-13 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL549_RS02550 eba02e131ff0b2bc0897574fa206f37b 659 Gene3D G3DSA:1.10.287.950 426 609 2.3E-50 T 28-03-2018 AL549_RS11715 40afe2da6740785a02342a685d5fa182 599 Pfam PF01432 Peptidase family M3 339 580 1.7E-22 T 28-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AL549_RS11715 40afe2da6740785a02342a685d5fa182 599 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 593 1.8E-218 T 28-03-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 AL549_RS11715 40afe2da6740785a02342a685d5fa182 599 Gene3D G3DSA:1.10.520.20 264 351 0.35 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL549_RS11715 40afe2da6740785a02342a685d5fa182 599 Pfam PF08439 Oligopeptidase F 106 174 5.3E-10 T 28-03-2018 IPR013647 Oligopeptidase F, N-terminal domain AL549_RS11715 40afe2da6740785a02342a685d5fa182 599 SUPERFAMILY SSF55486 5 580 3.94E-91 T 28-03-2018 AL549_RS22335 3fc4ea37d1e1915b69d36fc2fdb763b6 78 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 49 9.4E-23 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AL549_RS22335 3fc4ea37d1e1915b69d36fc2fdb763b6 78 Pfam PF02416 mttA/Hcf106 family 4 61 1.1E-14 T 28-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AL549_RS22335 3fc4ea37d1e1915b69d36fc2fdb763b6 78 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 74 25.967 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AL549_RS18665 86a319b4f44bf4995d0bd2bf09d948a8 364 Gene3D G3DSA:2.40.50.100 77 168 2.6E-11 T 28-03-2018 AL549_RS18665 86a319b4f44bf4995d0bd2bf09d948a8 364 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 273 8.0E-20 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL549_RS18665 86a319b4f44bf4995d0bd2bf09d948a8 364 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 60 354 6.4E-46 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL549_RS18665 86a319b4f44bf4995d0bd2bf09d948a8 364 SUPERFAMILY SSF111369 67 281 1.27E-28 T 28-03-2018 AL549_RS18665 86a319b4f44bf4995d0bd2bf09d948a8 364 Gene3D G3DSA:2.40.50.100 169 362 2.5E-9 T 28-03-2018 AL549_RS17120 79e04a16147713d1f223df7beae541e9 544 Gene3D G3DSA:3.30.565.10 399 544 8.6E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS17120 79e04a16147713d1f223df7beae541e9 544 Gene3D G3DSA:1.10.287.130 304 376 1.5E-9 T 28-03-2018 AL549_RS17120 79e04a16147713d1f223df7beae541e9 544 Pfam PF00512 His Kinase A (phospho-acceptor) domain 315 376 6.5E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS17120 79e04a16147713d1f223df7beae541e9 544 SUPERFAMILY SSF47384 297 378 5.69E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS17120 79e04a16147713d1f223df7beae541e9 544 SUPERFAMILY SSF55874 370 538 8.25E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS17120 79e04a16147713d1f223df7beae541e9 544 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 427 533 1.7E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS17120 79e04a16147713d1f223df7beae541e9 544 SMART SM00388 314 380 8.4E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL549_RS17120 79e04a16147713d1f223df7beae541e9 544 SMART SM00387 426 536 1.7E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL549_RS17120 79e04a16147713d1f223df7beae541e9 544 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 475 1.8E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS17120 79e04a16147713d1f223df7beae541e9 544 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 489 1.8E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS17120 79e04a16147713d1f223df7beae541e9 544 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 514 1.8E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS17120 79e04a16147713d1f223df7beae541e9 544 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 533 1.8E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL549_RS17120 79e04a16147713d1f223df7beae541e9 544 SMART SM00304 261 313 1.3E-4 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS20360 ce89e492cefe2237539ef27b8a40bed2 192 Pfam PF02525 Flavodoxin-like fold 13 179 3.1E-42 T 28-03-2018 IPR003680 Flavodoxin-like fold AL549_RS20360 ce89e492cefe2237539ef27b8a40bed2 192 SUPERFAMILY SSF52218 12 185 5.45E-47 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS20360 ce89e492cefe2237539ef27b8a40bed2 192 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 8 189 47.716 T 28-03-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AL549_RS20360 ce89e492cefe2237539ef27b8a40bed2 192 Gene3D G3DSA:3.40.50.360 7 184 6.4E-36 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS02620 8875f2c30cfff5820326feec217bf11a 304 SUPERFAMILY SSF103481 202 297 1.96E-9 T 28-03-2018 AL549_RS02620 8875f2c30cfff5820326feec217bf11a 304 Pfam PF00892 EamA-like transporter family 164 292 9.0E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS02620 8875f2c30cfff5820326feec217bf11a 304 Pfam PF00892 EamA-like transporter family 19 149 8.9E-10 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS02620 8875f2c30cfff5820326feec217bf11a 304 SUPERFAMILY SSF103481 73 152 5.75E-5 T 28-03-2018 AL549_RS10555 fd20a76c7571e7b814bbf85e332671d1 92 Gene3D G3DSA:3.10.20.30 3 91 1.0E-15 T 28-03-2018 IPR012675 Beta-grasp domain AL549_RS10555 fd20a76c7571e7b814bbf85e332671d1 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL549_RS10555 fd20a76c7571e7b814bbf85e332671d1 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 74 4.5E-9 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL549_RS10555 fd20a76c7571e7b814bbf85e332671d1 92 SUPERFAMILY SSF54292 4 82 4.98E-19 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL549_RS10220 8da147aa39638a08d65450697d477760 178 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 12 171 1.6E-62 T 28-03-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) AL549_RS14685 fa49e02cfc9968672ae64902e0243971 81 SUPERFAMILY SSF143880 4 67 1.26E-6 T 28-03-2018 IPR018841 Protein of unknown function DUF2442 AL549_RS14685 fa49e02cfc9968672ae64902e0243971 81 Pfam PF10387 Protein of unknown function (DUF2442) 6 79 7.1E-9 T 28-03-2018 IPR018841 Protein of unknown function DUF2442 AL549_RS14685 fa49e02cfc9968672ae64902e0243971 81 Gene3D G3DSA:3.30.2020.10 2 80 1.4E-12 T 28-03-2018 IPR018841 Protein of unknown function DUF2442 AL549_RS17000 5f1e5d2d076bbb904bef4588e9cc188d 418 SUPERFAMILY SSF110849 114 181 8.63E-7 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AL549_RS17000 5f1e5d2d076bbb904bef4588e9cc188d 418 Gene3D G3DSA:3.90.1530.10 109 211 9.0E-5 T 28-03-2018 AL549_RS16810 f69b9a67003410ac93f076f56e606422 251 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 9.8E-116 T 28-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AL549_RS16810 f69b9a67003410ac93f076f56e606422 251 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 47.607 T 28-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AL549_RS16810 f69b9a67003410ac93f076f56e606422 251 Gene3D G3DSA:3.90.550.10 1 251 2.7E-53 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS16810 f69b9a67003410ac93f076f56e606422 251 Pfam PF02348 Cytidylyltransferase 5 221 4.3E-68 T 28-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AL549_RS16810 f69b9a67003410ac93f076f56e606422 251 SUPERFAMILY SSF53448 3 246 1.2E-64 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL549_RS02795 b7ab6ac7e28b4bbf44fe8b7a8cef9317 286 SUPERFAMILY SSF46785 4 88 2.86E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02795 b7ab6ac7e28b4bbf44fe8b7a8cef9317 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.0E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS02795 b7ab6ac7e28b4bbf44fe8b7a8cef9317 286 Pfam PF03466 LysR substrate binding domain 89 285 2.1E-26 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS02795 b7ab6ac7e28b4bbf44fe8b7a8cef9317 286 Gene3D G3DSA:3.40.190.10 93 179 2.9E-6 T 28-03-2018 AL549_RS02795 b7ab6ac7e28b4bbf44fe8b7a8cef9317 286 SUPERFAMILY SSF53850 92 286 3.08E-29 T 28-03-2018 AL549_RS02795 b7ab6ac7e28b4bbf44fe8b7a8cef9317 286 Gene3D G3DSA:1.10.10.10 1 88 4.6E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS02795 b7ab6ac7e28b4bbf44fe8b7a8cef9317 286 Gene3D G3DSA:3.40.190.10 180 256 7.6E-16 T 28-03-2018 AL549_RS14085 995431313cb1e5e68f29d1ef809604c8 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 5.7E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS01905 aaf2a0fabdb1a18cfdb53b3f3e9ef693 69 Pfam PF11686 Protein of unknown function (DUF3283) 4 64 6.0E-35 T 28-03-2018 IPR021700 Protein of unknown function DUF3283 AL549_RS01905 aaf2a0fabdb1a18cfdb53b3f3e9ef693 69 Gene3D G3DSA:1.20.58.250 3 67 1.0E-15 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL549_RS04135 110d29bbed3521541d2a158518c9e0f1 157 PIRSF PIRSF006105 2 157 1.7E-48 T 28-03-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB AL549_RS04135 110d29bbed3521541d2a158518c9e0f1 157 SUPERFAMILY SSF48695 38 154 6.59E-42 T 28-03-2018 IPR011031 Multihaem cytochrome AL549_RS04135 110d29bbed3521541d2a158518c9e0f1 157 Gene3D G3DSA:1.10.1130.10 70 136 4.9E-30 T 28-03-2018 AL549_RS04135 110d29bbed3521541d2a158518c9e0f1 157 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 37 150 1.1E-49 T 28-03-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB AL549_RS09415 1b729dd4f4be99cff4b0e590f6138b03 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 7.4E-18 T 28-03-2018 IPR021249 Protein of unknown function DUF2788 AL549_RS22220 d4274d978f0baa515ef11db8331ac73a 90 Gene3D G3DSA:3.10.20.30 2 90 9.0E-18 T 28-03-2018 IPR012675 Beta-grasp domain AL549_RS22220 d4274d978f0baa515ef11db8331ac73a 90 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 77 1.3E-12 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL549_RS22220 d4274d978f0baa515ef11db8331ac73a 90 SUPERFAMILY SSF54292 1 87 5.77E-24 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL549_RS22220 d4274d978f0baa515ef11db8331ac73a 90 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL549_RS13290 2de8c8fc6107539b4abf0472f0b0cb9d 384 Pfam PF14022 Protein of unknown function (DUF4238) 15 278 5.6E-21 T 28-03-2018 IPR025332 Protein of unknown function DUF4238 AL549_RS06715 1bf438cd020a1fcd66e440edb13ea258 555 Pfam PF12592 Protein of unknown function (DUF3763) 486 537 9.5E-20 T 28-03-2018 IPR022547 ATPase, RavA, C-terminal GO:0016820 AL549_RS06715 1bf438cd020a1fcd66e440edb13ea258 555 SUPERFAMILY SSF52540 21 303 2.31E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06715 1bf438cd020a1fcd66e440edb13ea258 555 Gene3D G3DSA:3.40.50.300 7 207 1.0E-16 T 28-03-2018 AL549_RS06715 1bf438cd020a1fcd66e440edb13ea258 555 Gene3D G3DSA:1.10.8.300 213 296 1.7E-4 T 28-03-2018 AL549_RS06715 1bf438cd020a1fcd66e440edb13ea258 555 SMART SM00382 46 189 5.2E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS06715 1bf438cd020a1fcd66e440edb13ea258 555 Pfam PF07728 AAA domain (dynein-related subfamily) 49 179 9.3E-23 T 28-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AL549_RS07295 b64325c14feb68c120b0d3162ca6f73b 167 PIRSF PIRSF030840 1 167 4.2E-64 T 28-03-2018 IPR010413 Heme utilization carrier protein HutX-like AL549_RS07295 b64325c14feb68c120b0d3162ca6f73b 167 SUPERFAMILY SSF144064 1 164 4.71E-56 T 28-03-2018 AL549_RS07295 b64325c14feb68c120b0d3162ca6f73b 167 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 8 161 9.2E-63 T 28-03-2018 IPR010413 Heme utilization carrier protein HutX-like AL549_RS07295 b64325c14feb68c120b0d3162ca6f73b 167 Pfam PF06228 Haem utilisation ChuX/HutX 24 160 7.2E-33 T 28-03-2018 IPR010413 Heme utilization carrier protein HutX-like AL549_RS07295 b64325c14feb68c120b0d3162ca6f73b 167 Gene3D G3DSA:3.40.1570.10 4 167 1.1E-44 T 28-03-2018 AL549_RS22350 39b2e5a27d240b4f2552077f84ca3c0a 256 Pfam PF01026 TatD related DNase 2 252 4.6E-68 T 28-03-2018 IPR001130 TatD family GO:0016788 AL549_RS22350 39b2e5a27d240b4f2552077f84ca3c0a 256 Gene3D G3DSA:3.20.20.140 1 256 9.9E-73 T 28-03-2018 AL549_RS22350 39b2e5a27d240b4f2552077f84ca3c0a 256 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 253 6.7E-73 T 28-03-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AL549_RS22350 39b2e5a27d240b4f2552077f84ca3c0a 256 PIRSF PIRSF005902 1 256 4.7E-72 T 28-03-2018 IPR001130 TatD family GO:0016788 AL549_RS22350 39b2e5a27d240b4f2552077f84ca3c0a 256 SUPERFAMILY SSF51556 1 252 2.02E-80 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL549_RS09130 532efe95a5ed9d12632404154348643b 108 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 3 99 1.5E-25 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AL549_RS09130 532efe95a5ed9d12632404154348643b 108 Gene3D G3DSA:1.10.287.1160 69 97 6.5E-14 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AL549_RS09130 532efe95a5ed9d12632404154348643b 108 SUPERFAMILY SSF101498 3 99 7.19E-20 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AL549_RS09130 532efe95a5ed9d12632404154348643b 108 Pfam PF04316 Anti-sigma-28 factor, FlgM 43 96 5.5E-19 T 28-03-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal AL549_RS20375 01bb16e07675e2c46a7e7c4a64026a78 325 SUPERFAMILY SSF53474 31 299 3.46E-39 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS20375 01bb16e07675e2c46a7e7c4a64026a78 325 Gene3D G3DSA:3.40.50.1820 21 317 7.7E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AL549_RS20375 01bb16e07675e2c46a7e7c4a64026a78 325 Pfam PF00561 alpha/beta hydrolase fold 61 301 8.0E-21 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL549_RS20375 01bb16e07675e2c46a7e7c4a64026a78 325 PIRSF PIRSF005211 1 324 6.3E-103 T 28-03-2018 IPR012020 AB hydrolase 4 family AL549_RS04145 27a873f1fb90c6961309e1790aa67b6e 101 Pfam PF03927 NapD protein 6 80 9.7E-29 T 28-03-2018 IPR005623 Chaperone NapD, nitrate reductase assembly AL549_RS22310 10fc3e235e564d9916c1a7607d9053f5 302 Pfam PF00892 EamA-like transporter family 156 286 8.4E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS22310 10fc3e235e564d9916c1a7607d9053f5 302 Pfam PF00892 EamA-like transporter family 9 141 2.8E-18 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS22310 10fc3e235e564d9916c1a7607d9053f5 302 SUPERFAMILY SSF103481 189 291 2.09E-10 T 28-03-2018 AL549_RS22310 10fc3e235e564d9916c1a7607d9053f5 302 SUPERFAMILY SSF103481 43 144 1.83E-12 T 28-03-2018 AL549_RS09150 e604e3563d82ea92be427f3806a1352a 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 2.6E-28 T 28-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AL549_RS09150 e604e3563d82ea92be427f3806a1352a 131 PIRSF PIRSF002889 1 131 2.3E-32 T 28-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AL549_RS14040 09f3a85245eed049bde6fed827e100ef 123 Gene3D G3DSA:1.10.1200.10 25 118 1.2E-6 T 28-03-2018 AL549_RS14040 09f3a85245eed049bde6fed827e100ef 123 SUPERFAMILY SSF47336 24 87 1.01E-5 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL549_RS06360 17dffa9af3011889647efd9223668f94 660 SUPERFAMILY SSF56935 424 656 1.5E-5 T 28-03-2018 AL549_RS06360 17dffa9af3011889647efd9223668f94 660 Pfam PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB 57 659 2.1E-164 T 28-03-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB AL549_RS06360 17dffa9af3011889647efd9223668f94 660 Gene3D G3DSA:2.40.160.10 369 458 2.7E-4 T 28-03-2018 AL549_RS06360 17dffa9af3011889647efd9223668f94 660 Gene3D G3DSA:2.40.160.10 42 368 2.8E-5 T 28-03-2018 AL549_RS06360 17dffa9af3011889647efd9223668f94 660 Gene3D G3DSA:2.40.160.10 459 659 5.6E-4 T 28-03-2018 AL549_RS06360 17dffa9af3011889647efd9223668f94 660 TIGRFAM TIGR03509 OMP_MtrB_PioB: decaheme-associated outer membrane protein, MtrB/PioB family 49 657 3.6E-158 T 28-03-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB AL549_RS06360 17dffa9af3011889647efd9223668f94 660 SUPERFAMILY SSF56935 126 141 3.66E-7 T 28-03-2018 AL549_RS06360 17dffa9af3011889647efd9223668f94 660 SUPERFAMILY SSF56935 219 435 3.66E-7 T 28-03-2018 AL549_RS15835 8b1c5c2d8762ed5d281d911c0f9d2796 432 Gene3D G3DSA:2.40.160.20 342 429 2.1E-4 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS13230 f4bece052f38f873a31ae689cef94e3e 40 Pfam PF11665 Protein of unknown function (DUF3265) 14 40 2.2E-12 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS11160 1391b638106201bff9506e5bb7131c6b 243 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 122.774 T 28-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AL549_RS11160 1391b638106201bff9506e5bb7131c6b 243 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 6.6E-105 T 28-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AL549_RS11160 1391b638106201bff9506e5bb7131c6b 243 Gene3D G3DSA:3.60.21.10 1 237 1.8E-24 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS11160 1391b638106201bff9506e5bb7131c6b 243 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 1.1E-8 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL549_RS11160 1391b638106201bff9506e5bb7131c6b 243 SUPERFAMILY SSF56300 1 223 4.49E-33 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS18255 501c12581c8df020d3adfd8aaf8d50b4 291 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 124 273 2.1E-18 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL549_RS18255 501c12581c8df020d3adfd8aaf8d50b4 291 SUPERFAMILY SSF52266 100 284 1.05E-40 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL549_RS18255 501c12581c8df020d3adfd8aaf8d50b4 291 Gene3D G3DSA:3.40.50.1110 73 286 5.3E-28 T 28-03-2018 AL549_RS02710 2bb570265ca787f249d44430218ef443 244 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 217 237 2.8E-4 T 28-03-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 AL549_RS02710 2bb570265ca787f249d44430218ef443 244 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 10 237 4.1E-94 T 28-03-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family AL549_RS03040 cd9f826d9cf92d7c3fd337d3d0345bd8 65 Pfam PF04400 (Na+)-NQR maturation NqrM 22 61 3.7E-18 T 28-03-2018 IPR007495 (Na+)-NQR maturation factor NqrM AL549_RS15355 2d2d9ee65676a1d707a92268cea0216d 247 Pfam PF07070 SpoOM protein 2 215 6.9E-62 T 28-03-2018 IPR009776 Sporulation stage 0, protein M AL549_RS15520 7ac7f074e5b63a1c3d1b518863094ca2 179 SUPERFAMILY SSF55729 4 171 1.71E-31 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS15520 7ac7f074e5b63a1c3d1b518863094ca2 179 Gene3D G3DSA:3.40.630.30 1 175 1.7E-18 T 28-03-2018 AL549_RS15520 7ac7f074e5b63a1c3d1b518863094ca2 179 Pfam PF13302 Acetyltransferase (GNAT) domain 8 150 1.5E-19 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS04610 b0c820c7764723f860669d41ccfa8c77 635 SUPERFAMILY SSF53300 382 562 7.87E-9 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS04610 b0c820c7764723f860669d41ccfa8c77 635 Gene3D G3DSA:3.40.50.410 377 571 6.6E-13 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS08520 8ae81471f6997183c4d8f2ee66ebf32d 138 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS08520 8ae81471f6997183c4d8f2ee66ebf32d 138 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 27 3.3E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS08520 8ae81471f6997183c4d8f2ee66ebf32d 138 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 3.3E-4 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL549_RS22640 4932b4c17719f981a3b5eb6464cf9b9e 254 Pfam PF11932 Protein of unknown function (DUF3450) 12 249 3.3E-90 T 28-03-2018 IPR016866 Uncharacterised conserved protein UCP028069 AL549_RS22640 4932b4c17719f981a3b5eb6464cf9b9e 254 Gene3D G3DSA:1.20.1170.10 7 210 2.6E-4 T 28-03-2018 AL549_RS22640 4932b4c17719f981a3b5eb6464cf9b9e 254 PIRSF PIRSF028069 4 254 9.8E-94 T 28-03-2018 IPR016866 Uncharacterised conserved protein UCP028069 AL549_RS19845 e7a359a495bb41f49e2d7cf6cb201816 216 Gene3D G3DSA:3.30.70.60 110 213 4.5E-11 T 28-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AL549_RS19845 e7a359a495bb41f49e2d7cf6cb201816 216 Pfam PF04612 Type II secretion system (T2SS), protein M 9 75 1.9E-8 T 28-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 AL549_RS15595 d67988cbcc6a91143ad737da937633e4 153 Gene3D G3DSA:3.30.300.20 1 153 1.7E-35 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AL549_RS15595 d67988cbcc6a91143ad737da937633e4 153 Pfam PF02566 OsmC-like protein 55 152 2.8E-16 T 28-03-2018 IPR003718 OsmC/Ohr family AL549_RS15595 d67988cbcc6a91143ad737da937633e4 153 SUPERFAMILY SSF82784 1 152 3.8E-50 T 28-03-2018 IPR003718 OsmC/Ohr family AL549_RS02705 847204858b2722fe7d1fbef7376c916d 255 SUPERFAMILY SSF52540 6 231 3.91E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS02705 847204858b2722fe7d1fbef7376c916d 255 Gene3D G3DSA:3.40.50.300 1 238 6.5E-57 T 28-03-2018 AL549_RS02705 847204858b2722fe7d1fbef7376c916d 255 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS02705 847204858b2722fe7d1fbef7376c916d 255 SMART SM00382 26 214 5.5E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS02705 847204858b2722fe7d1fbef7376c916d 255 Pfam PF00005 ABC transporter 18 166 5.4E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS05800 9507f55329e0e27dd3677235dece76f6 179 Gene3D G3DSA:3.40.630.30 2 179 1.1E-25 T 28-03-2018 AL549_RS05800 9507f55329e0e27dd3677235dece76f6 179 Pfam PF13302 Acetyltransferase (GNAT) domain 9 148 9.6E-23 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS05800 9507f55329e0e27dd3677235dece76f6 179 SUPERFAMILY SSF55729 3 170 3.41E-35 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS02660 92d6f47cf7968c981d3f41ed1726d551 294 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 38 294 4.9E-90 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AL549_RS07010 f9dc1575a5444385abc9e93d6048920e 494 Pfam PF07690 Major Facilitator Superfamily 10 422 5.1E-10 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS07010 f9dc1575a5444385abc9e93d6048920e 494 Gene3D G3DSA:1.20.1250.20 8 199 1.4E-19 T 28-03-2018 AL549_RS07010 f9dc1575a5444385abc9e93d6048920e 494 SUPERFAMILY SSF103473 9 189 9.02E-19 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS07010 f9dc1575a5444385abc9e93d6048920e 494 SUPERFAMILY SSF103473 243 481 9.02E-19 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS07010 f9dc1575a5444385abc9e93d6048920e 494 Gene3D G3DSA:1.20.1250.20 252 486 6.2E-10 T 28-03-2018 AL549_RS17960 3bd2a0e10ef7d00ede749471523ccd8f 63 Pfam PF14056 Domain of unknown function (DUF4250) 8 62 6.7E-21 T 28-03-2018 IPR025346 Protein of unknown function DUF4250 AL549_RS21120 e5854bf53e0f8cc266e45eb7e5b33f77 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL549_RS21120 e5854bf53e0f8cc266e45eb7e5b33f77 213 SUPERFAMILY SSF46689 5 80 2.13E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS21120 e5854bf53e0f8cc266e45eb7e5b33f77 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.3E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL549_RS21120 e5854bf53e0f8cc266e45eb7e5b33f77 213 Gene3D G3DSA:1.10.357.10 1 209 1.3E-25 T 28-03-2018 AL549_RS07080 f044d8f982ee2221585e5ba08f3cddf4 384 Gene3D G3DSA:3.90.1150.10 286 383 4.5E-26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS07080 f044d8f982ee2221585e5ba08f3cddf4 384 SUPERFAMILY SSF53383 3 379 6.33E-90 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS07080 f044d8f982ee2221585e5ba08f3cddf4 384 Gene3D G3DSA:3.40.640.10 42 285 2.3E-39 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS07080 f044d8f982ee2221585e5ba08f3cddf4 384 Pfam PF00155 Aminotransferase class I and II 31 375 1.0E-33 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL549_RS14710 c8449959af029893c1eb21bdd44371d4 223 TIGRFAM TIGR04402 mob_CxxC_CxxC: mobilome CxxCx(11)CxxC protein 27 211 2.0E-55 T 28-03-2018 IPR030914 Mobilome CxxCx(11)CxxC protein AL549_RS09270 5982b506f4c9e8b24dffc726cc15883d 307 Pfam PF16200 C-terminal region of band_7 242 301 4.6E-7 T 28-03-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 AL549_RS09270 5982b506f4c9e8b24dffc726cc15883d 307 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 28-03-2018 IPR018080 Band 7/stomatin-like, conserved site AL549_RS09270 5982b506f4c9e8b24dffc726cc15883d 307 SUPERFAMILY SSF117892 53 187 1.96E-41 T 28-03-2018 IPR001107 Band 7 domain AL549_RS09270 5982b506f4c9e8b24dffc726cc15883d 307 Pfam PF01145 SPFH domain / Band 7 family 26 195 3.6E-34 T 28-03-2018 IPR001107 Band 7 domain AL549_RS09270 5982b506f4c9e8b24dffc726cc15883d 307 SMART SM00244 22 180 7.3E-60 T 28-03-2018 IPR001107 Band 7 domain AL549_RS09270 5982b506f4c9e8b24dffc726cc15883d 307 PRINTS PR00721 Stomatin signature 132 155 1.5E-28 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AL549_RS09270 5982b506f4c9e8b24dffc726cc15883d 307 PRINTS PR00721 Stomatin signature 175 196 1.5E-28 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AL549_RS09270 5982b506f4c9e8b24dffc726cc15883d 307 PRINTS PR00721 Stomatin signature 77 98 1.5E-28 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AL549_RS09270 5982b506f4c9e8b24dffc726cc15883d 307 PRINTS PR00721 Stomatin signature 112 129 1.5E-28 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AL549_RS09270 5982b506f4c9e8b24dffc726cc15883d 307 PRINTS PR00721 Stomatin signature 156 174 1.5E-28 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AL549_RS02295 410336fdaf2f320c0b514e3b860b5fe8 338 SUPERFAMILY SSF51735 1 337 5.32E-96 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS02295 410336fdaf2f320c0b514e3b860b5fe8 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 2.6E-137 T 28-03-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-70370 AL549_RS02295 410336fdaf2f320c0b514e3b860b5fe8 338 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 5.5E-6 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 AL549_RS02295 410336fdaf2f320c0b514e3b860b5fe8 338 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 5.5E-6 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 AL549_RS02295 410336fdaf2f320c0b514e3b860b5fe8 338 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 5.5E-6 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 AL549_RS02295 410336fdaf2f320c0b514e3b860b5fe8 338 Gene3D G3DSA:3.90.25.10 176 338 4.2E-38 T 28-03-2018 AL549_RS02295 410336fdaf2f320c0b514e3b860b5fe8 338 Gene3D G3DSA:3.40.50.720 1 175 2.1E-34 T 28-03-2018 AL549_RS02295 410336fdaf2f320c0b514e3b860b5fe8 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 7.2E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS13425 c0caba943a2e2a9dfe69ab15293b4e14 127 SUPERFAMILY SSF54427 1 125 1.25E-13 T 28-03-2018 IPR032710 NTF2-like domain AL549_RS13425 c0caba943a2e2a9dfe69ab15293b4e14 127 Gene3D G3DSA:3.10.450.50 1 127 2.3E-14 T 28-03-2018 AL549_RS13425 c0caba943a2e2a9dfe69ab15293b4e14 127 Pfam PF12680 SnoaL-like domain 10 122 2.7E-9 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL549_RS15530 0201fcac454e9fd1db9383f49e4342d5 278 Gene3D G3DSA:1.10.3210.10 3 256 5.0E-39 T 28-03-2018 AL549_RS15530 0201fcac454e9fd1db9383f49e4342d5 278 Pfam PF08668 HDOD domain 15 206 1.9E-55 T 28-03-2018 IPR013976 Metal-dependent hydrolase HDOD AL549_RS15530 0201fcac454e9fd1db9383f49e4342d5 278 SUPERFAMILY SSF109604 8 232 1.48E-56 T 28-03-2018 AL549_RS06245 3ede744cef74f35c3bf582bb4274f75f 446 Pfam PF13584 Oxygen tolerance 69 299 1.1E-25 T 28-03-2018 IPR025738 Aerotolerance-related protein BatD AL549_RS21285 443f932af8cfb6e8be729609bff822f1 156 Gene3D G3DSA:3.10.590.10 1 155 8.5E-61 T 28-03-2018 AL549_RS21285 443f932af8cfb6e8be729609bff822f1 156 Pfam PF01878 EVE domain 2 148 7.0E-56 T 28-03-2018 IPR002740 EVE domain AL549_RS21285 443f932af8cfb6e8be729609bff822f1 156 SUPERFAMILY SSF88697 1 148 1.14E-60 T 28-03-2018 IPR015947 PUA-like domain AL549_RS19635 86a537562343589690563962347ecaa4 357 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 8.3E-133 T 28-03-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AL549_RS19635 86a537562343589690563962347ecaa4 357 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 1.5E-70 T 28-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AL549_RS00910 93d2d8c1f026031b41ae26224dc0c94f 301 Pfam PF00892 EamA-like transporter family 9 135 9.1E-12 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS00910 93d2d8c1f026031b41ae26224dc0c94f 301 Pfam PF00892 EamA-like transporter family 150 283 2.8E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS00910 93d2d8c1f026031b41ae26224dc0c94f 301 SUPERFAMILY SSF103481 42 138 1.29E-11 T 28-03-2018 AL549_RS00910 93d2d8c1f026031b41ae26224dc0c94f 301 SUPERFAMILY SSF103481 185 287 4.32E-14 T 28-03-2018 AL549_RS22905 f8d6806cc4a1efa7ba06f5deb4b4d1a7 330 PIRSF PIRSF026649 12 317 1.3E-83 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL549_RS22905 f8d6806cc4a1efa7ba06f5deb4b4d1a7 330 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 14 313 1.3E-101 T 28-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 AL549_RS22905 f8d6806cc4a1efa7ba06f5deb4b4d1a7 330 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 308 2.6E-71 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL549_RS22905 f8d6806cc4a1efa7ba06f5deb4b4d1a7 330 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 313 45.708 T 28-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 AL549_RS16555 605a2798b8fb4149162b81d1844492cb 240 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 237 51.49 T 28-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 AL549_RS16555 605a2798b8fb4149162b81d1844492cb 240 Pfam PF04288 MukE-like family 10 234 1.6E-118 T 28-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 AL549_RS17235 7434e5979c4c9ed01be2a5571c8bb106 176 Pfam PF04315 Elongation factor P hydroxylase 11 168 2.3E-73 T 28-03-2018 IPR007411 Elongation factor P hydroxylase AL549_RS02730 0ce40f397540945b087023c40f64713e 404 Pfam PF12704 MacB-like periplasmic core domain 19 237 4.0E-22 T 28-03-2018 IPR025857 MacB-like periplasmic core domain AL549_RS02730 0ce40f397540945b087023c40f64713e 404 Pfam PF02687 FtsX-like permease family 305 396 1.2E-13 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL549_RS17880 0a343e9fb332e55e3e30be65e6c4d794 167 SUPERFAMILY SSF55729 2 141 1.02E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS17880 0a343e9fb332e55e3e30be65e6c4d794 167 Gene3D G3DSA:3.40.630.30 37 150 5.3E-14 T 28-03-2018 AL549_RS17880 0a343e9fb332e55e3e30be65e6c4d794 167 Pfam PF13302 Acetyltransferase (GNAT) domain 34 138 2.9E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS03480 a5c67049f2e95b138fa826057fcb393a 147 SUPERFAMILY SSF55804 1 146 8.24E-42 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS03480 a5c67049f2e95b138fa826057fcb393a 147 Gene3D G3DSA:3.40.930.10 1 147 4.5E-36 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL549_RS03480 a5c67049f2e95b138fa826057fcb393a 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 6.3E-35 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AL549_RS03480 a5c67049f2e95b138fa826057fcb393a 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain AL549_RS08590 77bf9fc0d42688882076cc4b92773e85 429 PIRSF PIRSF005353 1 429 3.8E-189 T 28-03-2018 IPR026033 Purine permease PbuG-like AL549_RS08590 77bf9fc0d42688882076cc4b92773e85 429 Pfam PF00860 Permease family 17 391 3.7E-56 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL549_RS23650 c7a44bc0c717284059722af49c81cbf3 319 Gene3D G3DSA:3.40.190.10 201 283 4.9E-12 T 28-03-2018 AL549_RS23650 c7a44bc0c717284059722af49c81cbf3 319 Gene3D G3DSA:1.10.10.10 19 101 7.4E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS23650 c7a44bc0c717284059722af49c81cbf3 319 Gene3D G3DSA:3.40.190.10 115 200 1.4E-12 T 28-03-2018 AL549_RS23650 c7a44bc0c717284059722af49c81cbf3 319 SUPERFAMILY SSF46785 22 99 2.72E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS23650 c7a44bc0c717284059722af49c81cbf3 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.3E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS23650 c7a44bc0c717284059722af49c81cbf3 319 SUPERFAMILY SSF53850 106 309 6.52E-38 T 28-03-2018 AL549_RS23650 c7a44bc0c717284059722af49c81cbf3 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS23650 c7a44bc0c717284059722af49c81cbf3 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS23650 c7a44bc0c717284059722af49c81cbf3 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL549_RS23650 c7a44bc0c717284059722af49c81cbf3 319 Pfam PF03466 LysR substrate binding domain 121 308 6.5E-20 T 28-03-2018 IPR005119 LysR, substrate-binding AL549_RS09640 a55ae166da1caec6830186b1402cfcf8 397 Gene3D G3DSA:3.40.190.10 2 323 4.7E-5 T 28-03-2018 AL549_RS22815 f00d98e4413386955754697849dad38f 392 Gene3D G3DSA:3.40.50.2000 209 351 2.6E-26 T 28-03-2018 AL549_RS22815 f00d98e4413386955754697849dad38f 392 Gene3D G3DSA:3.40.50.2000 1 208 1.5E-45 T 28-03-2018 AL549_RS22815 f00d98e4413386955754697849dad38f 392 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 6 372 4.9E-144 T 28-03-2018 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-4085001 AL549_RS22815 f00d98e4413386955754697849dad38f 392 SUPERFAMILY SSF53756 5 376 1.49E-94 T 28-03-2018 AL549_RS22815 f00d98e4413386955754697849dad38f 392 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 373 3.1E-90 T 28-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 AL549_RS16145 7629ff421e2f161a00860947a16448e3 428 PIRSF PIRSF006066 1 427 4.8E-75 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL549_RS16145 7629ff421e2f161a00860947a16448e3 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 2.7E-100 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL549_RS16145 7629ff421e2f161a00860947a16448e3 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 424 1.0E-107 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL549_RS18540 3b6e7e3019fa9d030a70e99d3dba5602 250 SUPERFAMILY SSF103491 60 154 8.11E-6 T 28-03-2018 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL549_RS17155 05482ae2c9d045cf747f696a59980212 121 Pfam PF04304 Protein of unknown function (DUF454) 1 109 5.6E-38 T 28-03-2018 IPR007401 Protein of unknown function DUF454 AL549_RS17155 05482ae2c9d045cf747f696a59980212 121 PIRSF PIRSF016789 1 116 3.4E-43 T 28-03-2018 IPR007401 Protein of unknown function DUF454 AL549_RS04865 6818f86f94f719d1ae7ae4f31317ff2f 249 SUPERFAMILY SSF53850 22 240 2.81E-36 T 28-03-2018 AL549_RS04865 6818f86f94f719d1ae7ae4f31317ff2f 249 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 240 5.9E-20 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS04865 6818f86f94f719d1ae7ae4f31317ff2f 249 Gene3D G3DSA:3.40.190.10 17 124 1.2E-12 T 28-03-2018 AL549_RS04865 6818f86f94f719d1ae7ae4f31317ff2f 249 Gene3D G3DSA:3.40.190.10 125 248 1.1E-8 T 28-03-2018 AL549_RS15610 a29830b728c0f96301fd9d32a3cb25c5 165 Pfam PF13505 Outer membrane protein beta-barrel domain 5 164 1.9E-13 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel AL549_RS15610 a29830b728c0f96301fd9d32a3cb25c5 165 Gene3D G3DSA:2.40.160.20 5 165 1.3E-14 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS15610 a29830b728c0f96301fd9d32a3cb25c5 165 SUPERFAMILY SSF56925 17 164 6.54E-22 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS21940 766d9d610865cd468e599b974c0e37d6 214 Pfam PF03006 Haemolysin-III related 7 204 1.0E-37 T 28-03-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AL549_RS21940 766d9d610865cd468e599b974c0e37d6 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 10 211 1.3E-66 T 28-03-2018 IPR005744 Hly-III GO:0016021|GO:0019835 AL549_RS09695 770e2eb890bfb943ab71fc0bec6592f7 148 SUPERFAMILY SSF54637 9 145 3.28E-30 T 28-03-2018 IPR029069 HotDog domain AL549_RS09695 770e2eb890bfb943ab71fc0bec6592f7 148 Gene3D G3DSA:3.10.129.10 9 144 6.3E-26 T 28-03-2018 AL549_RS09695 770e2eb890bfb943ab71fc0bec6592f7 148 Pfam PF13279 Thioesterase-like superfamily 18 119 3.2E-12 T 28-03-2018 AL549_RS11665 5e61bda4579861971604f93c499ea1de 130 SUPERFAMILY SSF52540 20 99 1.43E-6 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS11665 5e61bda4579861971604f93c499ea1de 130 Pfam PF03846 Cell division inhibitor SulA 27 96 3.7E-5 T 28-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 AL549_RS11665 5e61bda4579861971604f93c499ea1de 130 Gene3D G3DSA:3.40.50.300 24 124 1.3E-6 T 28-03-2018 AL549_RS18025 762042379ea8ccafe8406df50ac844f3 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 406 1.4E-108 T 28-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 AL549_RS18025 762042379ea8ccafe8406df50ac844f3 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.454 T 28-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AL549_RS18025 762042379ea8ccafe8406df50ac844f3 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 8.3E-205 T 28-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AL549_RS18025 762042379ea8ccafe8406df50ac844f3 414 PIRSF PIRSF016055 1 414 7.5E-201 T 28-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Pfam PF12245 Bacterial Ig-like domain (group 3) 507 522 3.1 T 28-03-2018 IPR022038 Bacterial Ig-like domain AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Pfam PF12245 Bacterial Ig-like domain (group 3) 837 864 2.5 T 28-03-2018 IPR022038 Bacterial Ig-like domain AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.120.640 2873 2995 0.0016 T 28-03-2018 AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.120.640 3110 3239 0.033 T 28-03-2018 AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.120.640 3013 3109 2.3E-5 T 28-03-2018 AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.120.640 3240 3365 3.0E-4 T 28-03-2018 AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.120.640 4027 4167 0.13 T 28-03-2018 AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.120.640 3367 3486 0.16 T 28-03-2018 AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.40.10 127 228 0.23 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.40.10 229 327 1.4E-7 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.40.10 430 529 1.7E-8 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.40.10 2048 2147 7.9E-8 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.40.10 667 766 0.0078 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.40.10 328 429 0.0011 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.40.10 1740 1844 6.7E-4 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.40.10 1846 1944 1.9E-5 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.40.10 1949 2046 2.7E-8 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2873 2998 1.0E-24 T 28-03-2018 IPR019959 T1SS-143 repeat-containing domain AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 4562 4652 7.0E-13 T 28-03-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.40.1310 1476 1578 6.1E-13 T 28-03-2018 AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.40.1310 1579 1704 0.47 T 28-03-2018 AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.40.1310 1271 1379 3.7E-7 T 28-03-2018 AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.40.1310 936 1038 5.2E-14 T 28-03-2018 AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.40.1310 832 935 4.8E-8 T 28-03-2018 AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.40.1310 1380 1475 2.4E-7 T 28-03-2018 AL549_RS00420 b9f65e89dd9a73fb192542408aaa1e3d 4654 Gene3D G3DSA:2.60.40.1310 1039 1163 5.0E-4 T 28-03-2018 AL549_RS05960 da2ea0d76f98e72caac24c13be3caf29 477 Gene3D G3DSA:1.10.287.950 255 477 1.3E-44 T 28-03-2018 AL549_RS05960 da2ea0d76f98e72caac24c13be3caf29 477 Gene3D G3DSA:1.10.287.950 94 254 3.7E-6 T 28-03-2018 AL549_RS05960 da2ea0d76f98e72caac24c13be3caf29 477 SUPERFAMILY SSF58104 166 476 6.15E-66 T 28-03-2018 AL549_RS05960 da2ea0d76f98e72caac24c13be3caf29 477 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 235 264 2.8E-24 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS05960 da2ea0d76f98e72caac24c13be3caf29 477 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 341 370 2.8E-24 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS05960 da2ea0d76f98e72caac24c13be3caf29 477 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 312 339 2.8E-24 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL549_RS05960 da2ea0d76f98e72caac24c13be3caf29 477 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 287 440 1.8E-37 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS05960 da2ea0d76f98e72caac24c13be3caf29 477 SMART SM00283 214 475 3.1E-53 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS04405 4bcc4d16a840ac6de921e1b348d115e3 292 SUPERFAMILY SSF103481 191 288 1.19E-9 T 28-03-2018 AL549_RS04405 4bcc4d16a840ac6de921e1b348d115e3 292 Pfam PF00892 EamA-like transporter family 9 144 3.1E-8 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS04405 4bcc4d16a840ac6de921e1b348d115e3 292 Pfam PF00892 EamA-like transporter family 155 284 3.5E-10 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS04405 4bcc4d16a840ac6de921e1b348d115e3 292 SUPERFAMILY SSF103481 47 145 5.75E-9 T 28-03-2018 AL549_RS17560 af6d2ace2e832e9ab4aadee9f6f535bf 95 Pfam PF09904 Winged helix-turn helix 4 91 1.2E-38 T 28-03-2018 IPR017162 Uncharacterised conserved protein UCP037266 AL549_RS17560 af6d2ace2e832e9ab4aadee9f6f535bf 95 PIRSF PIRSF037266 1 94 3.5E-42 T 28-03-2018 IPR017162 Uncharacterised conserved protein UCP037266 AL549_RS00990 c52213753f7dad042f8de045901f419c 366 Pfam PF13265 Protein of unknown function (DUF4056) 22 285 6.4E-122 T 28-03-2018 IPR025130 Protein of unknown function DUF4056 AL549_RS16865 99e7284034dbbf1a9fa09160c50bd014 255 Pfam PF10972 Peptidoglycan-binding protein, CsiV 6 254 8.0E-71 T 28-03-2018 IPR021241 Peptidoglycan-binding protein, CsiV AL549_RS03165 e56f4b4f67ec8c4e72fea83c150ac5fb 198 SUPERFAMILY SSF50182 109 175 3.92E-11 T 28-03-2018 IPR010920 LSM domain AL549_RS03165 e56f4b4f67ec8c4e72fea83c150ac5fb 198 Gene3D G3DSA:2.30.30.60 124 176 7.8E-13 T 28-03-2018 AL549_RS03165 e56f4b4f67ec8c4e72fea83c150ac5fb 198 Pfam PF00924 Mechanosensitive ion channel 78 174 1.4E-9 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL549_RS02970 43be9e4b3611ef7030ff3464e5096e46 298 SUPERFAMILY SSF103481 189 285 1.29E-15 T 28-03-2018 AL549_RS02970 43be9e4b3611ef7030ff3464e5096e46 298 Pfam PF00892 EamA-like transporter family 152 282 6.0E-18 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS02970 43be9e4b3611ef7030ff3464e5096e46 298 Pfam PF00892 EamA-like transporter family 9 137 1.8E-17 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS02970 43be9e4b3611ef7030ff3464e5096e46 298 SUPERFAMILY SSF103481 38 139 2.48E-13 T 28-03-2018 AL549_RS18205 bb52ee63985425ef849d577089a5463d 184 SUPERFAMILY SSF110857 1 123 3.01E-16 T 28-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like AL549_RS18205 bb52ee63985425ef849d577089a5463d 184 Gene3D G3DSA:3.10.490.10 1 150 5.7E-20 T 28-03-2018 AL549_RS18205 bb52ee63985425ef849d577089a5463d 184 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 108 3.9E-8 T 28-03-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AL549_RS09945 e806284b7b93571f7e8ee034d5aa7778 289 Pfam PF04280 Tim44-like domain 167 288 2.0E-14 T 28-03-2018 IPR007379 Tim44-like domain AL549_RS09945 e806284b7b93571f7e8ee034d5aa7778 289 SMART SM00978 158 289 2.0E-35 T 28-03-2018 IPR007379 Tim44-like domain AL549_RS09945 e806284b7b93571f7e8ee034d5aa7778 289 Pfam PF07466 Protein of unknown function (DUF1517) 28 124 1.4E-5 T 28-03-2018 IPR010903 Protein of unknown function DUF1517 AL549_RS09945 e806284b7b93571f7e8ee034d5aa7778 289 SUPERFAMILY SSF54427 168 288 1.75E-15 T 28-03-2018 IPR032710 NTF2-like domain AL549_RS18195 9f15ce63dd2fe0069310f16bc70241e7 483 Gene3D G3DSA:3.40.50.20 169 284 4.1E-21 T 28-03-2018 AL549_RS18195 9f15ce63dd2fe0069310f16bc70241e7 483 Pfam PF08443 RimK-like ATP-grasp domain 277 455 8.0E-10 T 28-03-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AL549_RS18195 9f15ce63dd2fe0069310f16bc70241e7 483 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 167 4.4E-44 T 28-03-2018 IPR025839 RimK-like ATPgrasp N-terminal domain AL549_RS18195 9f15ce63dd2fe0069310f16bc70241e7 483 Gene3D G3DSA:3.30.470.20 353 462 2.5E-23 T 28-03-2018 AL549_RS18195 9f15ce63dd2fe0069310f16bc70241e7 483 SUPERFAMILY SSF56059 268 476 1.41E-40 T 28-03-2018 AL549_RS18195 9f15ce63dd2fe0069310f16bc70241e7 483 Gene3D G3DSA:3.30.1490.20 285 352 1.2E-12 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL549_RS15645 bdea5dbb8b00d3ff9d4fcca225a4f707 155 Pfam PF07811 TadE-like protein 9 49 2.8E-9 T 28-03-2018 IPR012495 TadE-like AL549_RS00540 37c381e4d1c9d13c20feff675d4f147f 166 Pfam PF04664 Opioid growth factor receptor (OGFr) conserved region 27 164 3.7E-18 T 28-03-2018 IPR006757 Opioid growth factor receptor (OGFr) conserved domain GO:0004872|GO:0016020 AL549_RS04235 80a2cccccafa1fd7730943c202467246 173 Gene3D G3DSA:3.40.1280.10 2 171 1.1E-29 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL549_RS04235 80a2cccccafa1fd7730943c202467246 173 SUPERFAMILY SSF75217 5 145 2.22E-27 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AL549_RS04235 80a2cccccafa1fd7730943c202467246 173 Pfam PF00588 SpoU rRNA Methylase family 7 140 2.2E-19 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL549_RS13510 ad193350a6b684a5677f01cc25b8ef9e 339 Pfam PF04471 Restriction endonuclease 210 324 1.7E-22 T 28-03-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 AL549_RS13510 ad193350a6b684a5677f01cc25b8ef9e 339 Gene3D G3DSA:3.40.1350.10 198 328 2.0E-19 T 28-03-2018 AL549_RS13510 ad193350a6b684a5677f01cc25b8ef9e 339 SUPERFAMILY SSF52980 213 329 2.84E-15 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL549_RS15265 a1ffc2aeb1dd4daba1733158451605c8 40 Pfam PF11665 Protein of unknown function (DUF3265) 12 36 1.7E-6 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS01695 7d8dca864fc3158eea7c148b654f72b2 287 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 75 205 2.0E-43 T 28-03-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 AL549_RS00980 70979247569b91195d95c77c2ed0fed9 282 Gene3D G3DSA:2.40.160.20 35 279 1.0E-8 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS12650 33a24475eefbe65d7807e2c78aeade67 206 Gene3D G3DSA:1.10.3480.10 2 196 1.0E-42 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AL549_RS12650 33a24475eefbe65d7807e2c78aeade67 206 Pfam PF02613 Nitrate reductase delta subunit 42 156 1.2E-30 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AL549_RS12650 33a24475eefbe65d7807e2c78aeade67 206 SUPERFAMILY SSF89155 3 192 6.28E-52 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AL549_RS09895 9eee86f00f3b0506950e90673953e6b4 404 Pfam PF00155 Aminotransferase class I and II 61 391 1.3E-47 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL549_RS09895 9eee86f00f3b0506950e90673953e6b4 404 SUPERFAMILY SSF53383 5 400 7.93E-95 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS09895 9eee86f00f3b0506950e90673953e6b4 404 Gene3D G3DSA:3.40.640.10 53 280 7.0E-50 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS09895 9eee86f00f3b0506950e90673953e6b4 404 Gene3D G3DSA:3.90.1150.10 281 404 3.1E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS05100 a08b1daf870b86b345172b87ff06b01c 267 Gene3D G3DSA:1.25.40.10 4 263 9.4E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS05100 a08b1daf870b86b345172b87ff06b01c 267 SUPERFAMILY SSF144059 3 262 1.02E-84 T 28-03-2018 AL549_RS05100 a08b1daf870b86b345172b87ff06b01c 267 PIRSF PIRSF029288 1 265 2.8E-93 T 28-03-2018 IPR009211 Predicted virulence protein, SciE type AL549_RS05100 a08b1daf870b86b345172b87ff06b01c 267 Pfam PF07024 ImpE protein 140 258 3.0E-34 T 28-03-2018 IPR009211 Predicted virulence protein, SciE type AL549_RS18635 6b87a8e7bda1eb353e76d73db3ae7724 334 Pfam PF13609 Gram-negative porin 10 299 4.3E-30 T 28-03-2018 AL549_RS18635 6b87a8e7bda1eb353e76d73db3ae7724 334 Gene3D G3DSA:2.40.160.10 6 334 6.3E-41 T 28-03-2018 AL549_RS18635 6b87a8e7bda1eb353e76d73db3ae7724 334 SUPERFAMILY SSF56935 22 334 2.99E-56 T 28-03-2018 AL549_RS10690 349e526e7e81aee5934d29bbb001f577 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 4.9E-16 T 28-03-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AL549_RS14935 2d6817dfa90208477d272826b21e1351 51 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.2E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS23410 a5f2637e76405741ceccf7958e848e65 447 Gene3D G3DSA:3.30.2290.10 1 233 3.0E-54 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain AL549_RS23410 a5f2637e76405741ceccf7958e848e65 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 2.3E-62 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL549_RS23410 a5f2637e76405741ceccf7958e848e65 447 SUPERFAMILY SSF111283 12 447 1.7E-128 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL549_RS00995 2894892fae509190c46e4548a357c449 434 SUPERFAMILY SSF118215 9 407 1.96E-120 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS00995 2894892fae509190c46e4548a357c449 434 Pfam PF00375 Sodium:dicarboxylate symporter family 9 405 1.3E-131 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS00995 2894892fae509190c46e4548a357c449 434 Gene3D G3DSA:1.10.3860.10 1 413 2.6E-135 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS00995 2894892fae509190c46e4548a357c449 434 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 5.1E-53 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS00995 2894892fae509190c46e4548a357c449 434 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 5.1E-53 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS00995 2894892fae509190c46e4548a357c449 434 PRINTS PR00173 Glutamate-aspartate symporter signature 231 250 5.1E-53 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS00995 2894892fae509190c46e4548a357c449 434 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 5.1E-53 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS00995 2894892fae509190c46e4548a357c449 434 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 5.1E-53 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS00995 2894892fae509190c46e4548a357c449 434 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 5.1E-53 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS00995 2894892fae509190c46e4548a357c449 434 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 5.1E-53 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS00995 2894892fae509190c46e4548a357c449 434 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 5.1E-53 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL549_RS20245 68f28a7c554211fa67ad1a6200cd7aa8 208 Gene3D G3DSA:1.10.10.10 1 72 2.9E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS20245 68f28a7c554211fa67ad1a6200cd7aa8 208 SUPERFAMILY SSF46785 6 183 1.44E-35 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS20245 68f28a7c554211fa67ad1a6200cd7aa8 208 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 2.6E-6 T 28-03-2018 AL549_RS08470 27a877403f5e9e1e3cd2d1ad1f5e6e6e 428 Gene3D G3DSA:2.130.10.10 18 317 2.3E-8 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL549_RS08470 27a877403f5e9e1e3cd2d1ad1f5e6e6e 428 SUPERFAMILY SSF51004 328 351 4.19E-11 T 28-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain AL549_RS08470 27a877403f5e9e1e3cd2d1ad1f5e6e6e 428 SUPERFAMILY SSF51004 37 262 4.19E-11 T 28-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain AL549_RS08470 27a877403f5e9e1e3cd2d1ad1f5e6e6e 428 Gene3D G3DSA:2.120.10.30 318 420 0.16 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL549_RS12500 e92f0c5d37c2cd3d4e3f54cbe7491bd0 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 187 1.1E-80 T 28-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AL549_RS12500 e92f0c5d37c2cd3d4e3f54cbe7491bd0 206 Gene3D G3DSA:1.10.760.10 40 206 1.4E-26 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS12500 e92f0c5d37c2cd3d4e3f54cbe7491bd0 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 2.4E-81 T 28-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AL549_RS12500 e92f0c5d37c2cd3d4e3f54cbe7491bd0 206 SUPERFAMILY SSF46626 21 202 2.81E-28 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL549_RS06195 96be36986fe30afcbe989990534965cc 495 Pfam PF07690 Major Facilitator Superfamily 17 408 3.1E-56 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL549_RS06195 96be36986fe30afcbe989990534965cc 495 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 487 1.5E-109 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AL549_RS06195 96be36986fe30afcbe989990534965cc 495 Gene3D G3DSA:1.20.1250.20 9 196 1.6E-32 T 28-03-2018 AL549_RS06195 96be36986fe30afcbe989990534965cc 495 SUPERFAMILY SSF103473 469 490 4.19E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS06195 96be36986fe30afcbe989990534965cc 495 SUPERFAMILY SSF103473 247 418 4.19E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS06195 96be36986fe30afcbe989990534965cc 495 SUPERFAMILY SSF103473 10 196 4.19E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS06195 96be36986fe30afcbe989990534965cc 495 Gene3D G3DSA:1.20.1250.20 258 495 1.1E-20 T 28-03-2018 AL549_RS11855 76e42e1061df7073293ff888a0594f18 116 Pfam PF04342 Putative member of DMT superfamily (DUF486) 8 111 4.5E-47 T 28-03-2018 IPR007437 Putative member of DMT superfamily AL549_RS11855 76e42e1061df7073293ff888a0594f18 116 PIRSF PIRSF021239 1 114 3.3E-57 T 28-03-2018 IPR007437 Putative member of DMT superfamily AL549_RS03835 6f5627dd151906d7818c65c40bd3c8b9 412 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 1.9E-63 T 28-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 AL549_RS20450 99b2df05280b7037eb4d8bd2e44ff376 468 Gene3D G3DSA:3.20.20.140 100 400 2.2E-53 T 28-03-2018 AL549_RS20450 99b2df05280b7037eb4d8bd2e44ff376 468 SUPERFAMILY SSF51338 28 85 4.2E-34 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS20450 99b2df05280b7037eb4d8bd2e44ff376 468 SUPERFAMILY SSF51338 382 454 4.2E-34 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS20450 99b2df05280b7037eb4d8bd2e44ff376 468 Pfam PF01979 Amidohydrolase family 82 430 8.8E-68 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL549_RS20450 99b2df05280b7037eb4d8bd2e44ff376 468 Gene3D G3DSA:2.30.40.10 16 99 7.1E-19 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL549_RS20450 99b2df05280b7037eb4d8bd2e44ff376 468 SUPERFAMILY SSF51556 85 383 2.68E-82 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL549_RS03110 79333bf4dcbe6e87a710187211f3356f 179 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 43 177 4.0E-38 T 28-03-2018 IPR005247 YbhB/YbcL AL549_RS03110 79333bf4dcbe6e87a710187211f3356f 179 Pfam PF01161 Phosphatidylethanolamine-binding protein 46 177 5.3E-36 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AL549_RS03110 79333bf4dcbe6e87a710187211f3356f 179 Gene3D G3DSA:3.90.280.10 10 179 1.8E-48 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AL549_RS03110 79333bf4dcbe6e87a710187211f3356f 179 SUPERFAMILY SSF49777 24 179 1.83E-49 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AL549_RS11315 fd62e81004270b76d29732beeeae975a 139 Pfam PF04024 PspC domain 14 72 7.4E-15 T 28-03-2018 IPR007168 Phage shock protein, PspC, N-terminal AL549_RS11315 fd62e81004270b76d29732beeeae975a 139 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 13 139 5.8E-48 T 28-03-2018 IPR014320 Phage shock protein, PspC AL549_RS21710 8d9609ce339bc5e8f71428a0bd19b329 144 Pfam PF00011 Hsp20/alpha crystallin family 43 136 3.2E-19 T 28-03-2018 IPR002068 Alpha crystallin/Hsp20 domain AL549_RS21710 8d9609ce339bc5e8f71428a0bd19b329 144 Gene3D G3DSA:2.60.40.790 7 137 2.7E-21 T 28-03-2018 IPR008978 HSP20-like chaperone AL549_RS21710 8d9609ce339bc5e8f71428a0bd19b329 144 SUPERFAMILY SSF49764 6 137 1.92E-23 T 28-03-2018 IPR008978 HSP20-like chaperone AL549_RS17870 d547d142c07803d57fea963a9401982e 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 7.2E-137 T 28-03-2018 IPR021936 Protein of unknown function DUF3549 AL549_RS03725 d0883a5330bf94de994cec378193488a 682 Gene3D G3DSA:3.20.20.450 419 679 1.3E-68 T 28-03-2018 IPR001633 EAL domain AL549_RS03725 d0883a5330bf94de994cec378193488a 682 Pfam PF00563 EAL domain 440 663 1.2E-56 T 28-03-2018 IPR001633 EAL domain AL549_RS03725 d0883a5330bf94de994cec378193488a 682 Pfam PF02378 Phosphotransferase system, EIIC 117 322 2.5E-17 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL549_RS03725 d0883a5330bf94de994cec378193488a 682 SUPERFAMILY SSF141868 439 675 6.54E-67 T 28-03-2018 IPR001633 EAL domain AL549_RS03725 d0883a5330bf94de994cec378193488a 682 SMART SM00052 426 668 5.1E-60 T 28-03-2018 IPR001633 EAL domain AL549_RS03310 802dd7151cf26e4b4acd4589bf7e3c76 358 SUPERFAMILY SSF160935 10 336 6.28E-32 T 28-03-2018 AL549_RS03310 802dd7151cf26e4b4acd4589bf7e3c76 358 Pfam PF06863 Protein of unknown function (DUF1254) 66 147 3.9E-5 T 28-03-2018 IPR010679 Domain of unknown function DUF1254 AL549_RS03310 802dd7151cf26e4b4acd4589bf7e3c76 358 Gene3D G3DSA:2.60.40.1610 65 191 1.8E-9 T 28-03-2018 IPR010679 Domain of unknown function DUF1254 AL549_RS13430 16418b04c78ab7aa90c5e486ca931fdf 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.2E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS08375 008f3f1139f6577cd06278a79b602964 203 Pfam PF09335 SNARE associated Golgi protein 39 159 2.4E-24 T 28-03-2018 IPR032816 SNARE associated Golgi protein AL549_RS13115 8dc92b10306add4db40267cc96daef5f 57 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 5.6E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS02535 8ccc18790635281466e77fe412dfa17c 89 PRINTS PR00160 Glutaredoxin signature 60 73 3.4E-11 T 28-03-2018 IPR014025 Glutaredoxin subgroup AL549_RS02535 8ccc18790635281466e77fe412dfa17c 89 PRINTS PR00160 Glutaredoxin signature 46 59 3.4E-11 T 28-03-2018 IPR014025 Glutaredoxin subgroup AL549_RS02535 8ccc18790635281466e77fe412dfa17c 89 PRINTS PR00160 Glutaredoxin signature 4 22 3.4E-11 T 28-03-2018 IPR014025 Glutaredoxin subgroup AL549_RS02535 8ccc18790635281466e77fe412dfa17c 89 Pfam PF00462 Glutaredoxin 4 63 1.1E-21 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL549_RS02535 8ccc18790635281466e77fe412dfa17c 89 Gene3D G3DSA:3.40.30.10 1 84 2.8E-23 T 28-03-2018 AL549_RS02535 8ccc18790635281466e77fe412dfa17c 89 SUPERFAMILY SSF52833 3 84 3.31E-24 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS02535 8ccc18790635281466e77fe412dfa17c 89 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 6.2E-33 T 28-03-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 AL549_RS02535 8ccc18790635281466e77fe412dfa17c 89 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 28-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AL549_RS06465 bda57ea7db3d96b887d9d6636d5b9580 316 Gene3D G3DSA:1.10.3470.10 6 315 1.5E-45 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL549_RS06465 bda57ea7db3d96b887d9d6636d5b9580 316 SUPERFAMILY SSF81345 7 313 1.44E-58 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL549_RS06465 bda57ea7db3d96b887d9d6636d5b9580 316 Pfam PF01032 FecCD transport family 27 312 1.4E-54 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL549_RS13770 6f32b782eba5f7dccd00bab596d7d8b5 54 Pfam PF11665 Protein of unknown function (DUF3265) 21 48 1.2E-10 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS14900 37808eeeae9a2092539820ea88a1cc73 44 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.7E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS02975 4bb528cd050ea6516a0d7317b7d54007 350 Pfam PF01757 Acyltransferase family 5 329 1.6E-18 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AL549_RS05530 442366b6ea25c50a85783999959e7b60 61 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 2.2E-14 T 28-03-2018 IPR021309 Protein of unknown function DUF2892 AL549_RS09635 118bc1fd61933b6e57aad7216bba444f 399 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 189 396 2.5E-72 T 28-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AL549_RS09635 118bc1fd61933b6e57aad7216bba444f 399 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 4.8E-24 T 28-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AL549_RS09635 118bc1fd61933b6e57aad7216bba444f 399 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 2 395 6.9E-137 T 28-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AL549_RS09635 118bc1fd61933b6e57aad7216bba444f 399 Pfam PF07670 Nucleoside recognition 87 182 2.6E-7 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL549_RS09740 1adffe5074e7d5e620133f4e8cbc49b3 250 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 35 248 3.4E-74 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL549_RS09740 1adffe5074e7d5e620133f4e8cbc49b3 250 SUPERFAMILY SSF53901 40 160 1.18E-6 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS09740 1adffe5074e7d5e620133f4e8cbc49b3 250 Gene3D G3DSA:3.40.47.10 9 234 4.2E-4 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL549_RS01825 908c4e7ac084804a0c1f73f86ca1b429 288 Gene3D G3DSA:3.40.91.30 185 283 3.9E-7 T 28-03-2018 AL549_RS10860 a4f1c2b77244d0681eb96d92308894a5 340 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 131 337 6.7E-32 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS10860 a4f1c2b77244d0681eb96d92308894a5 340 Gene3D G3DSA:1.10.3720.10 3 326 4.1E-34 T 28-03-2018 AL549_RS10860 a4f1c2b77244d0681eb96d92308894a5 340 SUPERFAMILY SSF161098 108 320 5.89E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS06690 b40316fcbf20a3555b967f2de6283f0f 139 Gene3D G3DSA:3.40.1650.10 1 139 6.3E-40 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AL549_RS06690 b40316fcbf20a3555b967f2de6283f0f 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 5.5E-48 T 28-03-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AL549_RS06690 b40316fcbf20a3555b967f2de6283f0f 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.824 T 28-03-2018 IPR023064 D-ribose pyranase GO:0016872 AL549_RS06690 b40316fcbf20a3555b967f2de6283f0f 139 SUPERFAMILY SSF102546 1 139 2.22E-43 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AL549_RS03355 0909565e7152d090d1726e2f8f8e65b6 166 SUPERFAMILY SSF81342 4 166 2.35E-29 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL549_RS03355 0909565e7152d090d1726e2f8f8e65b6 166 Pfam PF01292 Prokaryotic cytochrome b561 6 166 1.2E-20 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AL549_RS03355 0909565e7152d090d1726e2f8f8e65b6 166 Gene3D G3DSA:1.20.950.20 1 166 7.3E-26 T 28-03-2018 AL549_RS07115 7aba20eba35bf176849bbb29fb0204b5 104 SUPERFAMILY SSF54909 4 69 1.7E-8 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AL549_RS07115 7aba20eba35bf176849bbb29fb0204b5 104 Gene3D G3DSA:3.30.70.100 1 78 8.2E-4 T 28-03-2018 AL549_RS14450 54b39aebc0dee78ee8e5f52104143106 44 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 2.3E-10 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS04005 2fa2a9a4bbd5c46b258bbef453f2028e 324 SUPERFAMILY SSF103481 212 294 9.81E-11 T 28-03-2018 AL549_RS04005 2fa2a9a4bbd5c46b258bbef453f2028e 324 Pfam PF00892 EamA-like transporter family 155 294 1.9E-11 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS04005 2fa2a9a4bbd5c46b258bbef453f2028e 324 Pfam PF00892 EamA-like transporter family 4 136 1.9E-7 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS04005 2fa2a9a4bbd5c46b258bbef453f2028e 324 SUPERFAMILY SSF103481 39 138 1.03E-10 T 28-03-2018 AL549_RS17890 ec75cfeb9ce43e0424ed3636debe09b7 97 Gene3D G3DSA:1.20.5.1070 1 97 2.3E-4 T 28-03-2018 AL549_RS12900 c0a0ee942e5ee24a80de6b0372c7b3a7 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 3.2E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS01800 3ec07e91121580dd927fe2ba872d5245 119 Pfam PF04219 Protein of unknown function, DUF 12 100 4.0E-34 T 28-03-2018 IPR007335 Protein of unknown function DUF413 AL549_RS16445 da8ba56b3830ce7a3db2ceaf1470200d 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 5.2E-25 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AL549_RS13120 e87c40a5e25dddcfef0a131458511bfc 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 5.5E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS20110 4783a5c3ec5ce2249f42795e14863dd9 196 Pfam PF05137 Fimbrial assembly protein (PilN) 102 177 7.0E-15 T 28-03-2018 IPR007813 Fimbrial assembly PilN AL549_RS06165 777b3259d2433637dd248bd01fcfcba7 266 Gene3D G3DSA:3.60.110.10 6 264 6.8E-44 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL549_RS06165 777b3259d2433637dd248bd01fcfcba7 266 SUPERFAMILY SSF56317 23 257 1.44E-44 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL549_RS06165 777b3259d2433637dd248bd01fcfcba7 266 Pfam PF00795 Carbon-nitrogen hydrolase 25 259 4.9E-23 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL549_RS13620 1e4ba141fdef9b1ab3d6c60c9ec775bf 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 1.0E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS09730 75fd86949244cd3f1120aa6b1948d8ea 86 Gene3D G3DSA:1.10.1200.10 3 86 2.7E-18 T 28-03-2018 AL549_RS09730 75fd86949244cd3f1120aa6b1948d8ea 86 Pfam PF00550 Phosphopantetheine attachment site 7 80 5.8E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL549_RS09730 75fd86949244cd3f1120aa6b1948d8ea 86 SUPERFAMILY SSF47336 5 85 5.23E-14 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL549_RS20615 fae50dde27a7f49638530a49baf377a4 144 SMART SM00450 40 138 1.1E-21 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS20615 fae50dde27a7f49638530a49baf377a4 144 SUPERFAMILY SSF52821 16 141 6.55E-32 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS20615 fae50dde27a7f49638530a49baf377a4 144 Gene3D G3DSA:3.40.250.10 21 144 5.5E-26 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS20615 fae50dde27a7f49638530a49baf377a4 144 Pfam PF00581 Rhodanese-like domain 42 135 1.3E-18 T 28-03-2018 IPR001763 Rhodanese-like domain AL549_RS16155 e16205db3714158c94816250ab005b38 362 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 327 1.1E-70 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL549_RS16155 e16205db3714158c94816250ab005b38 362 PIRSF PIRSF039026 4 362 8.8E-141 T 28-03-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like AL549_RS16155 e16205db3714158c94816250ab005b38 362 Gene3D G3DSA:3.40.190.10 165 303 0.002 T 28-03-2018 AL549_RS15310 42f2959b765d833de79bc45da09abc29 159 SUPERFAMILY SSF55729 2 141 2.74E-22 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS15310 42f2959b765d833de79bc45da09abc29 159 Gene3D G3DSA:3.40.630.30 10 155 1.2E-20 T 28-03-2018 AL549_RS15310 42f2959b765d833de79bc45da09abc29 159 Pfam PF00583 Acetyltransferase (GNAT) family 47 138 1.6E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS02590 1d6757321ff2761b7d379451763722c7 177 Pfam PF01872 RibD C-terminal domain 4 169 1.1E-20 T 28-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AL549_RS02590 1d6757321ff2761b7d379451763722c7 177 SUPERFAMILY SSF53597 4 175 7.2E-36 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL549_RS02590 1d6757321ff2761b7d379451763722c7 177 Gene3D G3DSA:3.40.430.10 3 175 7.8E-43 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL549_RS22650 c3a4280932d759e24832a18166c1bafd 341 SUPERFAMILY SSF161098 108 321 1.83E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS22650 c3a4280932d759e24832a18166c1bafd 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 1.6E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS22650 c3a4280932d759e24832a18166c1bafd 341 Gene3D G3DSA:1.10.3720.10 3 327 8.4E-36 T 28-03-2018 AL549_RS11410 1b040217bcf319d8d1e9debe47cb6fab 82 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 2.4E-18 T 28-03-2018 IPR010710 Protein of unknown function DUF1289 AL549_RS10185 ad39936d51f18394c9b30cce865234ae 478 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 2.3E-162 T 28-03-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 AL549_RS10185 ad39936d51f18394c9b30cce865234ae 478 Pfam PF03553 Na+/H+ antiporter family 161 453 9.7E-66 T 28-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL549_RS10625 eae0661fc7994e139989ac50e4b0f9ca 145 Pfam PF03918 Cytochrome C biogenesis protein 35 143 2.7E-41 T 28-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AL549_RS10625 eae0661fc7994e139989ac50e4b0f9ca 145 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 12 143 3.5E-59 T 28-03-2018 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF AL549_RS08370 8c50878dcf04bafe9dbb3268ee8fd8a2 637 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 50 503 3.5E-145 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AL549_RS08370 8c50878dcf04bafe9dbb3268ee8fd8a2 637 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 13 502 1.8E-156 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AL549_RS08370 8c50878dcf04bafe9dbb3268ee8fd8a2 637 ProSitePatterns PS01303 BCCT family of transporters signature. 321 330 - T 28-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AL549_RS13055 1cc4c5eb719774641c10af25ca6facbf 202 Pfam PF03703 Bacterial PH domain 92 168 1.5E-10 T 28-03-2018 IPR005182 Domain of unknown function DUF304 AL549_RS04300 bc3818a0e92a7bb5af01c823f0bbb95d 305 Pfam PF01545 Cation efflux family 22 232 2.6E-36 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL549_RS04300 bc3818a0e92a7bb5af01c823f0bbb95d 305 SUPERFAMILY SSF161111 14 233 3.27E-52 T 28-03-2018 AL549_RS04300 bc3818a0e92a7bb5af01c823f0bbb95d 305 Gene3D G3DSA:1.20.1510.10 17 232 9.5E-53 T 28-03-2018 AL549_RS04300 bc3818a0e92a7bb5af01c823f0bbb95d 305 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 304 2.2E-65 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL549_RS16795 1dadd4efbed72f3571113517b5b78a58 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.247 T 28-03-2018 IPR006698 Uncharacterised protein family UPF0229 AL549_RS16795 1dadd4efbed72f3571113517b5b78a58 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 3.8E-188 T 28-03-2018 IPR006698 Uncharacterised protein family UPF0229 AL549_RS00625 d150db3cde12b32c395430eb1ff5b1fa 146 SUPERFAMILY SSF55961 2 145 4.88E-22 T 28-03-2018 AL549_RS00625 d150db3cde12b32c395430eb1ff5b1fa 146 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 11 143 2.2E-8 T 28-03-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 AL549_RS00625 d150db3cde12b32c395430eb1ff5b1fa 146 Gene3D G3DSA:3.30.530.20 2 146 8.1E-20 T 28-03-2018 IPR023393 START-like domain AL549_RS01555 6110fbf865c3bc1c73e8c96bb88e5bda 222 SUPERFAMILY SSF56925 20 218 1.31E-16 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS01555 6110fbf865c3bc1c73e8c96bb88e5bda 222 Pfam PF13505 Outer membrane protein beta-barrel domain 7 218 2.6E-16 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel AL549_RS01555 6110fbf865c3bc1c73e8c96bb88e5bda 222 Gene3D G3DSA:2.40.160.20 18 221 9.5E-20 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS01875 6672b75f75818579d056a045034080a6 421 Pfam PF12704 MacB-like periplasmic core domain 27 254 9.6E-15 T 28-03-2018 IPR025857 MacB-like periplasmic core domain AL549_RS01875 6672b75f75818579d056a045034080a6 421 Pfam PF02687 FtsX-like permease family 314 411 2.3E-9 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL549_RS09775 720f171e593ff957049ef813cc26a3ea 490 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 459 1.1E-153 T 28-03-2018 IPR003846 Uncharacterised protein family UPF0061 AL549_RS09775 720f171e593ff957049ef813cc26a3ea 490 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 476 44.496 T 28-03-2018 IPR003846 Uncharacterised protein family UPF0061 AL549_RS13460 97171c761f6f0887b48f1fe59c2768c1 96 Gene3D G3DSA:1.10.340.20 10 90 2.7E-18 T 28-03-2018 AL549_RS05070 30da6920b6c2d02ca6ef6df3980c618f 231 Gene3D G3DSA:3.40.1730.10 8 231 8.3E-55 T 28-03-2018 AL549_RS05070 30da6920b6c2d02ca6ef6df3980c618f 231 PIRSF PIRSF029287 1 229 3.3E-31 T 28-03-2018 IPR017748 Type VI secretion system-associated, BMAA0400 AL549_RS05070 30da6920b6c2d02ca6ef6df3980c618f 231 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 11 140 1.5E-38 T 28-03-2018 IPR017748 Type VI secretion system-associated, BMAA0400 AL549_RS05070 30da6920b6c2d02ca6ef6df3980c618f 231 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 11 141 5.6E-45 T 28-03-2018 IPR017748 Type VI secretion system-associated, BMAA0400 AL549_RS19525 db7544d81176b44b5c3a866f386a376a 203 SUPERFAMILY SSF58104 26 147 1.83E-5 T 28-03-2018 AL549_RS19525 db7544d81176b44b5c3a866f386a376a 203 Gene3D G3DSA:1.20.1270.60 11 199 1.6E-6 T 28-03-2018 AL549_RS06920 7ba472652725c9cee8ef5791c81ff062 337 Pfam PF10974 Protein of unknown function (DUF2804) 15 335 6.9E-88 T 28-03-2018 IPR021243 Protein of unknown function DUF2804 AL549_RS03290 895652e6ef748da6d988153aaea29e22 249 Pfam PF07670 Nucleoside recognition 85 179 2.4E-10 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL549_RS14745 c8b1a619e73ae51bce93488f0ea12af3 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 4.1E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS23495 d2d507b3d1f4fc5edc5f29da536ae3ff 105 Pfam PF13466 STAS domain 14 92 6.0E-18 T 28-03-2018 IPR002645 STAS domain AL549_RS23495 d2d507b3d1f4fc5edc5f29da536ae3ff 105 SUPERFAMILY SSF52091 2 96 1.41E-15 T 28-03-2018 IPR002645 STAS domain AL549_RS23495 d2d507b3d1f4fc5edc5f29da536ae3ff 105 Gene3D G3DSA:3.30.750.24 12 104 5.4E-9 T 28-03-2018 IPR002645 STAS domain AL549_RS01625 8f0cce8704f5d2d4b7dfdf7ebbdda6af 199 SUPERFAMILY SSF52833 42 196 8.54E-39 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS01625 8f0cce8704f5d2d4b7dfdf7ebbdda6af 199 Pfam PF02630 SCO1/SenC 19 177 1.9E-33 T 28-03-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL549_RS01625 8f0cce8704f5d2d4b7dfdf7ebbdda6af 199 Gene3D G3DSA:3.40.30.10 38 196 2.2E-19 T 28-03-2018 AL549_RS02105 9b86aba5116c9b97aa57a96abb9fb5a5 282 SUPERFAMILY SSF53697 99 275 5.37E-39 T 28-03-2018 AL549_RS02105 9b86aba5116c9b97aa57a96abb9fb5a5 282 SUPERFAMILY SSF46689 2 77 1.16E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL549_RS02105 9b86aba5116c9b97aa57a96abb9fb5a5 282 Pfam PF01380 SIS domain 129 257 1.8E-18 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL549_RS02105 9b86aba5116c9b97aa57a96abb9fb5a5 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 74 4.4E-20 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL549_RS02105 9b86aba5116c9b97aa57a96abb9fb5a5 282 Gene3D G3DSA:3.40.50.10490 104 277 3.0E-35 T 28-03-2018 AL549_RS02105 9b86aba5116c9b97aa57a96abb9fb5a5 282 Gene3D G3DSA:1.10.10.10 1 103 1.1E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS00395 bab5c2a4aee93e37a919b90f3a367f67 302 Pfam PF12849 PBP superfamily domain 45 245 2.8E-9 T 28-03-2018 IPR024370 PBP domain AL549_RS00395 bab5c2a4aee93e37a919b90f3a367f67 302 Gene3D G3DSA:3.40.190.10 32 291 1.4E-13 T 28-03-2018 AL549_RS00395 bab5c2a4aee93e37a919b90f3a367f67 302 SUPERFAMILY SSF53850 44 291 6.38E-35 T 28-03-2018 AL549_RS11385 c005489006e36c37b3f81f1020eae4ce 207 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL549_RS11385 c005489006e36c37b3f81f1020eae4ce 207 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 2.0E-10 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL549_RS23110 2ff5d8db50135fc9335f30d0c18f2254 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 28-03-2018 IPR019926 Ribosomal protein L3, conserved site AL549_RS23110 2ff5d8db50135fc9335f30d0c18f2254 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 1.2E-94 T 28-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23110 2ff5d8db50135fc9335f30d0c18f2254 209 Gene3D G3DSA:4.10.960.10 57 165 6.5E-36 T 28-03-2018 AL549_RS23110 2ff5d8db50135fc9335f30d0c18f2254 209 Pfam PF00297 Ribosomal protein L3 49 182 9.0E-16 T 28-03-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL549_RS23110 2ff5d8db50135fc9335f30d0c18f2254 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.03 T 28-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL549_RS23110 2ff5d8db50135fc9335f30d0c18f2254 209 SUPERFAMILY SSF50447 1 208 8.65E-84 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AL549_RS12935 4914929f5a5ca5679f503b6ec9ec08f1 40 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 3.3E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS14695 4914929f5a5ca5679f503b6ec9ec08f1 40 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 3.3E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS06250 154ab17e6297c8d747d5a8a70118fcc5 585 SUPERFAMILY SSF53300 109 278 6.67E-14 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS06250 154ab17e6297c8d747d5a8a70118fcc5 585 Pfam PF13519 von Willebrand factor type A domain 112 217 5.9E-11 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS06250 154ab17e6297c8d747d5a8a70118fcc5 585 Gene3D G3DSA:3.40.50.410 106 296 1.3E-13 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS06250 154ab17e6297c8d747d5a8a70118fcc5 585 Gene3D G3DSA:1.25.40.10 379 570 1.7E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS17070 5c06cd005e0627538426ebd8c47c703e 308 PIRSF PIRSF020419 1 292 1.4E-75 T 28-03-2018 IPR016773 Ferric uptake regulator, CjrA, predicted AL549_RS17070 5c06cd005e0627538426ebd8c47c703e 308 SUPERFAMILY SSF159501 28 277 2.49E-72 T 28-03-2018 AL549_RS17070 5c06cd005e0627538426ebd8c47c703e 308 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 49 248 5.3E-59 T 28-03-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN AL549_RS02035 866a4039f7a28b4874f630f84fc06fc0 894 Gene3D G3DSA:1.25.40.20 267 873 9.6E-32 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL549_RS02035 866a4039f7a28b4874f630f84fc06fc0 894 SUPERFAMILY SSF48403 742 863 7.93E-27 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL549_RS02035 866a4039f7a28b4874f630f84fc06fc0 894 SMART SM00248 782 811 1.7 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL549_RS02035 866a4039f7a28b4874f630f84fc06fc0 894 SMART SM00248 815 844 0.029 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL549_RS02035 866a4039f7a28b4874f630f84fc06fc0 894 SMART SM00248 749 778 0.0018 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL549_RS02035 866a4039f7a28b4874f630f84fc06fc0 894 Pfam PF12796 Ankyrin repeats (3 copies) 754 838 8.9E-14 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AL549_RS11905 120e720cf1090297d037478a9dc7ef16 252 Pfam PF01925 Sulfite exporter TauE/SafE 6 245 1.0E-40 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL549_RS20210 e826ea3188589de8dbce7de00d3cf48b 185 Pfam PF05036 Sporulation related domain 111 180 4.6E-14 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL549_RS20210 e826ea3188589de8dbce7de00d3cf48b 185 SUPERFAMILY SSF110997 110 181 3.53E-16 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL549_RS20210 e826ea3188589de8dbce7de00d3cf48b 185 Gene3D G3DSA:3.30.70.1070 107 184 8.2E-13 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL549_RS14575 40038b6a4ea1c6982c71610600a2b61c 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.6E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS07360 1d8f07974f0b2ae32fb9aef64cb48f14 250 Gene3D G3DSA:1.10.287.70 9 211 7.8E-29 T 28-03-2018 AL549_RS07360 1d8f07974f0b2ae32fb9aef64cb48f14 250 Pfam PF00520 Ion transport protein 42 209 7.3E-17 T 28-03-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 AL549_RS07360 1d8f07974f0b2ae32fb9aef64cb48f14 250 SUPERFAMILY SSF81324 13 210 2.22E-48 T 28-03-2018 AL549_RS07360 1d8f07974f0b2ae32fb9aef64cb48f14 250 PRINTS PR00169 Potassium channel signature 183 209 8.0E-8 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL549_RS07360 1d8f07974f0b2ae32fb9aef64cb48f14 250 PRINTS PR00169 Potassium channel signature 123 146 8.0E-8 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL549_RS07360 1d8f07974f0b2ae32fb9aef64cb48f14 250 PRINTS PR00169 Potassium channel signature 154 176 8.0E-8 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL549_RS05625 6d6572d7fa182d6fc6ce0c0885d2b621 304 Pfam PF00892 EamA-like transporter family 139 275 2.4E-9 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS05625 6d6572d7fa182d6fc6ce0c0885d2b621 304 Pfam PF00892 EamA-like transporter family 3 119 1.6E-9 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS07250 f648a4d3ed9b0e4f5771d44d535668a6 342 Pfam PF01757 Acyltransferase family 6 314 1.3E-30 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AL549_RS14265 21556b638240290d57831b8f31ba5f34 106 Pfam PF07119 Protein of unknown function (DUF1375) 13 82 2.3E-6 T 28-03-2018 IPR010780 Protein of unknown function DUF1375 AL549_RS12730 8ec3a683172c0f61181467e1c9146a34 88 Pfam PF11173 Protein of unknown function (DUF2960) 1 77 1.2E-33 T 28-03-2018 IPR021343 Protein of unknown function DUF2960 AL549_RS02565 8af52a4edfc9008078d6d6f908ccce10 82 Pfam PF11730 Protein of unknown function (DUF3297) 11 81 1.5E-36 T 28-03-2018 IPR021724 Protein of unknown function DUF3297 AL549_RS05900 cedb4f88c22a0870e9a619b1a3b892d2 394 Pfam PF03741 Integral membrane protein TerC family 141 342 2.0E-53 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AL549_RS05900 cedb4f88c22a0870e9a619b1a3b892d2 394 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 70 374 5.0E-104 T 28-03-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AL549_RS04850 24c95e32bf9d1054b8ede1fe09f63463 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.4E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04850 24c95e32bf9d1054b8ede1fe09f63463 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.4E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04850 24c95e32bf9d1054b8ede1fe09f63463 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.4E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04850 24c95e32bf9d1054b8ede1fe09f63463 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.4E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04850 24c95e32bf9d1054b8ede1fe09f63463 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 2.4E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04850 24c95e32bf9d1054b8ede1fe09f63463 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.4E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04850 24c95e32bf9d1054b8ede1fe09f63463 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 6.7E-58 T 28-03-2018 AL549_RS04850 24c95e32bf9d1054b8ede1fe09f63463 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 0.0026 T 28-03-2018 AL549_RS04850 24c95e32bf9d1054b8ede1fe09f63463 252 SUPERFAMILY SSF51735 6 250 3.18E-69 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS04850 24c95e32bf9d1054b8ede1fe09f63463 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.2E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04850 24c95e32bf9d1054b8ede1fe09f63463 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.2E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04850 24c95e32bf9d1054b8ede1fe09f63463 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.2E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS04850 24c95e32bf9d1054b8ede1fe09f63463 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL549_RS04850 24c95e32bf9d1054b8ede1fe09f63463 252 Gene3D G3DSA:3.40.50.720 1 49 2.7E-7 T 28-03-2018 AL549_RS04850 24c95e32bf9d1054b8ede1fe09f63463 252 Gene3D G3DSA:3.40.50.720 50 252 5.3E-56 T 28-03-2018 AL549_RS20595 3b5780df3450369376b126009416a126 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 8 465 7.7E-48 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL549_RS20595 3b5780df3450369376b126009416a126 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 466 4.1E-81 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL549_RS10215 8ece37936a996e3c75e2455ec165e9fe 240 Pfam PF00106 short chain dehydrogenase 21 199 8.1E-17 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS10215 8ece37936a996e3c75e2455ec165e9fe 240 SUPERFAMILY SSF51735 14 201 5.71E-24 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS10215 8ece37936a996e3c75e2455ec165e9fe 240 Gene3D G3DSA:3.40.50.720 2 237 4.7E-19 T 28-03-2018 AL549_RS10345 7732bd6a42566815ffef15124fb5244f 151 Pfam PF02391 MoaE protein 8 119 2.8E-38 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL549_RS10345 7732bd6a42566815ffef15124fb5244f 151 SUPERFAMILY SSF54690 4 149 1.83E-57 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL549_RS10345 7732bd6a42566815ffef15124fb5244f 151 Gene3D G3DSA:3.90.1170.40 1 149 5.6E-60 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL549_RS10935 d758d5d4461e08edd63603c3a6b15e4d 222 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 9.2E-60 T 28-03-2018 IPR021367 Protein of unknown function DUF2982 AL549_RS03295 b7526fdebf2ca3a5956d02ff6ce5a0e0 155 Pfam PF07670 Nucleoside recognition 31 124 2.0E-6 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL549_RS04635 be02d76667c52b1d77c99c8115acaacd 295 Gene3D G3DSA:3.30.70.270 17 94 0.031 T 28-03-2018 AL549_RS04635 be02d76667c52b1d77c99c8115acaacd 295 PIRSF PIRSF028200 14 294 4.4E-110 T 28-03-2018 IPR016875 Uncharacterised conserved protein UCP028200 AL549_RS23365 0bd1f72f5758c249e99ef121e87a966b 119 Pfam PF10973 Protein of unknown function (DUF2799) 29 112 4.7E-21 T 28-03-2018 IPR021242 Protein of unknown function DUF2799 AL549_RS13730 b91de443a7f12c53d17418a4662f6760 63 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 1.3E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS13615 57ae9d076793f2b23e6964e9ed6beb51 172 Pfam PF13302 Acetyltransferase (GNAT) domain 56 148 3.5E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS13615 57ae9d076793f2b23e6964e9ed6beb51 172 SUPERFAMILY SSF55729 17 162 3.66E-18 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS13615 57ae9d076793f2b23e6964e9ed6beb51 172 Gene3D G3DSA:3.40.630.30 9 159 4.9E-14 T 28-03-2018 AL549_RS12710 270bfe2f16d3b4849ab6b1b6cd48f628 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 220 5.4E-11 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS12710 270bfe2f16d3b4849ab6b1b6cd48f628 232 SUPERFAMILY SSF161098 6 222 1.24E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS12710 270bfe2f16d3b4849ab6b1b6cd48f628 232 Gene3D G3DSA:1.10.3720.10 3 222 3.5E-22 T 28-03-2018 AL549_RS09210 8e9d3be736b69f769e7f161856cfa00d 377 SUPERFAMILY SSF64518 1 376 1.44E-97 T 28-03-2018 AL549_RS09210 8e9d3be736b69f769e7f161856cfa00d 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.4E-25 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL549_RS09210 8e9d3be736b69f769e7f161856cfa00d 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 6.9E-43 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL549_RS09210 8e9d3be736b69f769e7f161856cfa00d 377 PRINTS PR00207 Flagellin signature 37 54 1.9E-27 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL549_RS09210 8e9d3be736b69f769e7f161856cfa00d 377 PRINTS PR00207 Flagellin signature 111 134 1.9E-27 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL549_RS09210 8e9d3be736b69f769e7f161856cfa00d 377 PRINTS PR00207 Flagellin signature 76 95 1.9E-27 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL549_RS09210 8e9d3be736b69f769e7f161856cfa00d 377 Pfam PF07196 Flagellin hook IN motif 195 249 2.2E-9 T 28-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL549_RS09210 8e9d3be736b69f769e7f161856cfa00d 377 Gene3D G3DSA:1.20.1330.10 40 349 1.4E-69 T 28-03-2018 AL549_RS21260 0272060e92c6b476d0cf019e1a59b149 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 4.1E-12 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS21260 0272060e92c6b476d0cf019e1a59b149 111 SMART SM00418 5 83 4.0E-25 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS21260 0272060e92c6b476d0cf019e1a59b149 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 2.0E-18 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS21260 0272060e92c6b476d0cf019e1a59b149 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 2.0E-18 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS21260 0272060e92c6b476d0cf019e1a59b149 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 2.0E-18 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS21260 0272060e92c6b476d0cf019e1a59b149 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 2.0E-18 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL549_RS21260 0272060e92c6b476d0cf019e1a59b149 111 Gene3D G3DSA:1.10.10.10 3 110 7.6E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS21260 0272060e92c6b476d0cf019e1a59b149 111 SUPERFAMILY SSF46785 5 88 3.39E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS10360 d3243f72c635eeefddaf0eca0f16d103 300 Gene3D G3DSA:1.10.3720.10 28 289 8.1E-42 T 28-03-2018 AL549_RS10360 d3243f72c635eeefddaf0eca0f16d103 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 1.9E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS10360 d3243f72c635eeefddaf0eca0f16d103 300 SUPERFAMILY SSF161098 97 281 8.63E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS10360 d3243f72c635eeefddaf0eca0f16d103 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 69 8.8E-15 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL549_RS06650 2eff4210204dea7f68af1b16d29bec00 378 PIRSF PIRSF000345 5 335 1.5E-96 T 28-03-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 AL549_RS06650 2eff4210204dea7f68af1b16d29bec00 378 Pfam PF00487 Fatty acid desaturase 47 266 3.0E-19 T 28-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AL549_RS06650 2eff4210204dea7f68af1b16d29bec00 378 PRINTS PR00075 Fatty acid desaturase family 1 signature 102 131 3.9E-31 T 28-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL549_RS06650 2eff4210204dea7f68af1b16d29bec00 378 PRINTS PR00075 Fatty acid desaturase family 1 signature 192 213 3.9E-31 T 28-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL549_RS06650 2eff4210204dea7f68af1b16d29bec00 378 PRINTS PR00075 Fatty acid desaturase family 1 signature 161 179 3.9E-31 T 28-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL549_RS06650 2eff4210204dea7f68af1b16d29bec00 378 PRINTS PR00075 Fatty acid desaturase family 1 signature 14 34 3.9E-31 T 28-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL549_RS06650 2eff4210204dea7f68af1b16d29bec00 378 PRINTS PR00075 Fatty acid desaturase family 1 signature 235 249 3.9E-31 T 28-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL549_RS06650 2eff4210204dea7f68af1b16d29bec00 378 PRINTS PR00075 Fatty acid desaturase family 1 signature 64 84 3.9E-31 T 28-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL549_RS21220 bf8507af3fa189bc9b99eb433e85876e 206 Pfam PF07947 YhhN family 26 204 4.6E-34 T 28-03-2018 IPR012506 YhhN-like GO:0016021 AL549_RS05420 1c2359c697c3e47f44ad1c5cb8c06afb 285 Pfam PF01226 Formate/nitrite transporter 8 257 3.7E-61 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AL549_RS05420 1c2359c697c3e47f44ad1c5cb8c06afb 285 Gene3D G3DSA:1.20.1080.10 2 271 5.3E-67 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL549_RS20395 3c6e83c1af2ce7e725226f28303fa4f2 263 Pfam PF07063 Domain of unknown function (DUF1338) 30 261 4.3E-46 T 28-03-2018 IPR009770 Domain of unknown function DUF1338 AL549_RS20395 3c6e83c1af2ce7e725226f28303fa4f2 263 SMART SM01150 3 262 3.0E-109 T 28-03-2018 IPR009770 Domain of unknown function DUF1338 AL549_RS07935 d19c9a27c57e20661c113d32b53ed580 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 4.2E-23 T 28-03-2018 IPR021242 Protein of unknown function DUF2799 AL549_RS15205 b4b29027969decdb4a1533eb1d6e74b2 96 Gene3D G3DSA:1.10.340.20 10 90 4.7E-18 T 28-03-2018 AL549_RS04440 4328ff774ce0783089ee4d6dc214559f 204 Gene3D G3DSA:3.90.850.10 6 200 1.1E-46 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL549_RS04440 4328ff774ce0783089ee4d6dc214559f 204 SUPERFAMILY SSF56529 9 188 4.06E-46 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL549_RS04440 4328ff774ce0783089ee4d6dc214559f 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 186 4.1E-28 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL549_RS13085 1eabd1c0e9f4e3a27d21f9298414fe17 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.5E-18 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS17130 a35cbd7b1e2e86e4ae8c1b6561fd47f5 381 Gene3D G3DSA:2.60.40.10 30 131 6.0E-10 T 28-03-2018 IPR013783 Immunoglobulin-like fold AL549_RS17130 a35cbd7b1e2e86e4ae8c1b6561fd47f5 381 Gene3D G3DSA:3.30.750.44 134 221 1.2E-6 T 28-03-2018 AL549_RS00650 b08e1d7e9c344c970367ddf638aea12e 424 Pfam PF11301 Protein of unknown function (DUF3103) 65 422 9.6E-182 T 28-03-2018 IPR021452 Protein of unknown function DUF3103 AL549_RS16165 bf58b872f06a5a5c8656150995021711 198 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 3 198 38.597 T 28-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL549_RS16165 bf58b872f06a5a5c8656150995021711 198 Pfam PF00925 GTP cyclohydrolase II 19 171 2.0E-59 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL549_RS16165 bf58b872f06a5a5c8656150995021711 198 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 23 195 4.4E-62 T 28-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL549_RS16165 bf58b872f06a5a5c8656150995021711 198 SUPERFAMILY SSF142695 19 172 2.88E-54 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL549_RS16800 d7d87207e9bd643579a3d96de9a92222 510 Pfam PF04293 SpoVR like protein 17 447 1.9E-177 T 28-03-2018 IPR007390 Sporulation stage V, protein R AL549_RS07240 6443b46b56c9bb7d51058381ff2a673a 458 Pfam PF07670 Nucleoside recognition 144 238 1.3E-7 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL549_RS09080 b903e23a7b8cbaf2c48259aad9abee3c 372 SUPERFAMILY SSF56935 44 372 6.11E-40 T 28-03-2018 AL549_RS09080 b903e23a7b8cbaf2c48259aad9abee3c 372 Gene3D G3DSA:2.40.160.10 44 372 9.1E-37 T 28-03-2018 AL549_RS09080 b903e23a7b8cbaf2c48259aad9abee3c 372 Pfam PF13609 Gram-negative porin 10 342 7.2E-34 T 28-03-2018 AL549_RS06470 1fe2b4445ae4c63c5569e3fb3d06a8a1 311 SUPERFAMILY SSF81345 4 306 3.53E-63 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL549_RS06470 1fe2b4445ae4c63c5569e3fb3d06a8a1 311 Pfam PF01032 FecCD transport family 8 306 1.2E-63 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL549_RS06470 1fe2b4445ae4c63c5569e3fb3d06a8a1 311 Gene3D G3DSA:1.10.3470.10 2 311 4.4E-42 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL549_RS05445 e86fcec2744718535ac30c8e6a7d4111 455 Gene3D G3DSA:1.20.1170.10 16 234 2.0E-5 T 28-03-2018 AL549_RS05445 e86fcec2744718535ac30c8e6a7d4111 455 PIRSF PIRSF037714 2 452 2.6E-160 T 28-03-2018 IPR017270 Putative MotA/TolQ/ExbB family protein AL549_RS05445 e86fcec2744718535ac30c8e6a7d4111 455 Pfam PF01618 MotA/TolQ/ExbB proton channel family 322 426 1.1E-28 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL549_RS18510 efee64ab4a88253cd3fd7b90169483db 292 Pfam PF01136 Peptidase family U32 82 236 2.4E-12 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL549_RS03135 6d784823154c62158ec3059e807adfa5 386 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 281 1.3E-9 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL549_RS03135 6d784823154c62158ec3059e807adfa5 386 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 60 373 8.0E-38 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL549_RS03135 6d784823154c62158ec3059e807adfa5 386 SUPERFAMILY SSF111369 62 283 1.06E-22 T 28-03-2018 AL549_RS03135 6d784823154c62158ec3059e807adfa5 386 Gene3D G3DSA:2.40.50.100 182 346 7.9E-4 T 28-03-2018 AL549_RS03135 6d784823154c62158ec3059e807adfa5 386 Gene3D G3DSA:2.40.50.100 148 181 0.41 T 28-03-2018 AL549_RS03135 6d784823154c62158ec3059e807adfa5 386 Gene3D G3DSA:2.40.50.100 70 147 1.5E-12 T 28-03-2018 AL549_RS17305 94ceeaaeeaa4e53570c7e02108318ad0 262 PRINTS PR01805 VacJ lipoprotein signature 117 134 1.2E-29 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AL549_RS17305 94ceeaaeeaa4e53570c7e02108318ad0 262 PRINTS PR01805 VacJ lipoprotein signature 154 171 1.2E-29 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AL549_RS17305 94ceeaaeeaa4e53570c7e02108318ad0 262 PRINTS PR01805 VacJ lipoprotein signature 66 82 1.2E-29 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AL549_RS17305 94ceeaaeeaa4e53570c7e02108318ad0 262 PRINTS PR01805 VacJ lipoprotein signature 48 61 1.2E-29 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AL549_RS17305 94ceeaaeeaa4e53570c7e02108318ad0 262 Pfam PF04333 MlaA lipoprotein 48 238 1.1E-62 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AL549_RS06695 132094f113d16bcdf3b4a97dcb28383a 206 PIRSF PIRSF006324 1 206 7.8E-45 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL549_RS06695 132094f113d16bcdf3b4a97dcb28383a 206 Pfam PF01810 LysE type translocator 15 204 2.6E-24 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL549_RS04030 e197ca50f49dd9b25cb11e4697a373b5 219 Gene3D G3DSA:2.40.50.110 47 123 2.6E-6 T 28-03-2018 AL549_RS00485 068b5e8a3ace965632c59259e956a444 359 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 36 124 5.0E-12 T 28-03-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain AL549_RS00485 068b5e8a3ace965632c59259e956a444 359 PIRSF PIRSF035009 1 359 2.6E-143 T 28-03-2018 IPR017035 Uncharacterised conserved protein UCP035009, HsdR, All3000-type AL549_RS08385 2717f1f66795da7b2e897ac93151dbe7 209 Pfam PF09335 SNARE associated Golgi protein 50 158 3.1E-13 T 28-03-2018 IPR032816 SNARE associated Golgi protein AL549_RS14505 d4259544462f5ac6dca69e966039d590 121 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 117 2.4E-6 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL549_RS14505 d4259544462f5ac6dca69e966039d590 121 SUPERFAMILY SSF54593 12 119 6.44E-24 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS14505 d4259544462f5ac6dca69e966039d590 121 Gene3D G3DSA:3.10.180.10 7 120 2.1E-13 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS13855 bea49b91646f4007f833e948e64a0ba9 198 Gene3D G3DSA:3.40.50.150 2 179 2.2E-18 T 28-03-2018 AL549_RS13855 bea49b91646f4007f833e948e64a0ba9 198 Pfam PF08241 Methyltransferase domain 39 132 1.1E-10 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AL549_RS13855 bea49b91646f4007f833e948e64a0ba9 198 SUPERFAMILY SSF53335 7 196 1.48E-22 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS00635 38e0375c7bb207406dbb260fb2ee1866 312 Pfam PF00892 EamA-like transporter family 161 295 8.1E-10 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS00635 38e0375c7bb207406dbb260fb2ee1866 312 Pfam PF00892 EamA-like transporter family 12 141 8.7E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS00635 38e0375c7bb207406dbb260fb2ee1866 312 SUPERFAMILY SSF103481 187 297 7.85E-8 T 28-03-2018 AL549_RS00635 38e0375c7bb207406dbb260fb2ee1866 312 SUPERFAMILY SSF103481 46 144 1.7E-13 T 28-03-2018 AL549_RS05095 734a8348ba656b8fa2aa49bae8415d06 535 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 99 529 9.0E-162 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL549_RS05095 734a8348ba656b8fa2aa49bae8415d06 535 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 84 529 9.7E-136 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL549_RS04770 0630a75f614b0c2c774b986523ea83a5 322 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 313 6.7E-71 T 28-03-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 AL549_RS04770 0630a75f614b0c2c774b986523ea83a5 322 Pfam PF01699 Sodium/calcium exchanger protein 174 315 6.0E-32 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AL549_RS04770 0630a75f614b0c2c774b986523ea83a5 322 Pfam PF01699 Sodium/calcium exchanger protein 6 144 1.0E-22 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AL549_RS16765 7fd73fe37f5991c40179ab25dc15616c 326 Gene3D G3DSA:2.40.128.140 15 323 1.1E-83 T 28-03-2018 IPR018707 Protein of unknown function DUF2219 AL549_RS16765 7fd73fe37f5991c40179ab25dc15616c 326 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 28 323 3.2E-86 T 28-03-2018 IPR018707 Protein of unknown function DUF2219 AL549_RS20100 885acbdb4538752545a3b8cc0a6a4526 170 Pfam PF04351 Pilus assembly protein, PilP 24 169 3.2E-40 T 28-03-2018 IPR007446 Pilus assembly protein PilP AL549_RS20100 885acbdb4538752545a3b8cc0a6a4526 170 PIRSF PIRSF016481 1 170 2.0E-48 T 28-03-2018 IPR007446 Pilus assembly protein PilP AL549_RS20255 c6791eedc69168ec2f705c2abaf06bca 157 Pfam PF05656 Protein of unknown function (DUF805) 25 155 5.3E-21 T 28-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AL549_RS19425 ec223687618ce3525072328df79e8005 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 4.1E-48 T 28-03-2018 IPR025218 Domain of unknown function DUF4426 AL549_RS21270 abe61c96685292652719460203874ac4 205 Pfam PF01810 LysE type translocator 15 202 2.1E-36 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL549_RS21270 abe61c96685292652719460203874ac4 205 PIRSF PIRSF006324 1 205 6.6E-57 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL549_RS03255 b3253e7ad9b6866141daacf23bf35cd3 576 Pfam PF00474 Sodium:solute symporter family 33 416 3.0E-27 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL549_RS02460 51253f990217f2db387db88846548abb 491 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 8 470 1.3E-161 T 28-03-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 AL549_RS02460 51253f990217f2db387db88846548abb 491 Pfam PF03553 Na+/H+ antiporter family 160 464 6.8E-51 T 28-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL549_RS07635 37a0215d78e5f7301d6a951463b717e8 317 Pfam PF03186 CobD/Cbib protein 18 291 5.3E-38 T 28-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AL549_RS09300 352b14d850a4cd8c7caaec66f62e1b52 264 Pfam PF07556 Protein of unknown function (DUF1538) 21 246 5.6E-68 T 28-03-2018 IPR011435 Protein of unknown function DUF1538 AL549_RS00135 def38f55700d4174ce398f70395a4ef3 343 Pfam PF13439 Glycosyltransferase Family 4 13 158 4.3E-9 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL549_RS00135 def38f55700d4174ce398f70395a4ef3 343 Pfam PF13692 Glycosyl transferases group 1 182 311 2.1E-15 T 28-03-2018 AL549_RS00135 def38f55700d4174ce398f70395a4ef3 343 Gene3D G3DSA:3.40.50.2000 115 317 5.6E-19 T 28-03-2018 AL549_RS00135 def38f55700d4174ce398f70395a4ef3 343 SUPERFAMILY SSF53756 3 313 7.85E-34 T 28-03-2018 AL549_RS13545 7e04d03a5c59b332752463c2ae2d24a7 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.7E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS13640 edd5292e754c0473dfd6908b723f5cf5 52 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.2E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS05215 7aab2adab6c4cd16f08d75d0149cac80 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 441 2.0E-144 T 28-03-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 AL549_RS05215 7aab2adab6c4cd16f08d75d0149cac80 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 451 2.0E-125 T 28-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AL549_RS09795 8dd2d08057b1d9f3960f023716a56447 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 294 1.4E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS09795 8dd2d08057b1d9f3960f023716a56447 307 SUPERFAMILY SSF161098 68 294 2.35E-47 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS09795 8dd2d08057b1d9f3960f023716a56447 307 Gene3D G3DSA:1.10.3720.10 28 307 7.4E-40 T 28-03-2018 AL549_RS02215 76872cf58172ede0bc988eddd9893605 234 Pfam PF04286 Protein of unknown function (DUF445) 140 233 7.7E-9 T 28-03-2018 IPR007383 Protein of unknown function DUF445 AL549_RS02930 0658578e68d12e5afe114d55327480ca 217 Gene3D G3DSA:3.40.109.10 1 217 3.2E-37 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL549_RS02930 0658578e68d12e5afe114d55327480ca 217 Pfam PF00881 Nitroreductase family 8 193 3.4E-28 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL549_RS02930 0658578e68d12e5afe114d55327480ca 217 SUPERFAMILY SSF55469 1 216 5.23E-64 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL549_RS03510 a92fb56e9477ab7c268caa6d45dd8e2e 404 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 9 384 1.8E-131 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS03510 a92fb56e9477ab7c268caa6d45dd8e2e 404 PRINTS PR00166 Aromatic amino acid permease signature 84 104 6.2E-81 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS03510 a92fb56e9477ab7c268caa6d45dd8e2e 404 PRINTS PR00166 Aromatic amino acid permease signature 144 164 6.2E-81 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS03510 a92fb56e9477ab7c268caa6d45dd8e2e 404 PRINTS PR00166 Aromatic amino acid permease signature 281 300 6.2E-81 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS03510 a92fb56e9477ab7c268caa6d45dd8e2e 404 PRINTS PR00166 Aromatic amino acid permease signature 336 355 6.2E-81 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS03510 a92fb56e9477ab7c268caa6d45dd8e2e 404 PRINTS PR00166 Aromatic amino acid permease signature 182 204 6.2E-81 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS03510 a92fb56e9477ab7c268caa6d45dd8e2e 404 PRINTS PR00166 Aromatic amino acid permease signature 220 239 6.2E-81 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS03510 a92fb56e9477ab7c268caa6d45dd8e2e 404 PRINTS PR00166 Aromatic amino acid permease signature 315 333 6.2E-81 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS03510 a92fb56e9477ab7c268caa6d45dd8e2e 404 PRINTS PR00166 Aromatic amino acid permease signature 39 58 6.2E-81 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS03510 a92fb56e9477ab7c268caa6d45dd8e2e 404 PRINTS PR00166 Aromatic amino acid permease signature 12 35 6.2E-81 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL549_RS03510 a92fb56e9477ab7c268caa6d45dd8e2e 404 Pfam PF03222 Tryptophan/tyrosine permease family 3 391 1.0E-128 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AL549_RS12120 b6f792fe01347a1e9b1ce8f7606ec3bd 252 SMART SM00563 67 182 4.4E-40 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS12120 b6f792fe01347a1e9b1ce8f7606ec3bd 252 Gene3D G3DSA:3.40.1130.10 29 251 1.3E-44 T 28-03-2018 AL549_RS12120 b6f792fe01347a1e9b1ce8f7606ec3bd 252 Pfam PF01553 Acyltransferase 56 180 2.5E-32 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS12120 b6f792fe01347a1e9b1ce8f7606ec3bd 252 SUPERFAMILY SSF69593 4 242 9.42E-59 T 28-03-2018 AL549_RS12120 b6f792fe01347a1e9b1ce8f7606ec3bd 252 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 4.4E-42 T 28-03-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 AL549_RS15035 62c8b2b7dd18ab83dee2a6677d9cfb85 40 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 1.0E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS09105 c42908de7e3f215c614c72fa742bd978 377 Pfam PF16539 Flagellar assembly protein T, middle domain 115 256 7.3E-44 T 28-03-2018 IPR032386 Flagellar assembly protein T, middle domain AL549_RS09105 c42908de7e3f215c614c72fa742bd978 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 375 1.1E-27 T 28-03-2018 IPR032388 Flagellar assembly protein T, C-terminal AL549_RS09105 c42908de7e3f215c614c72fa742bd978 377 Gene3D G3DSA:3.40.50.10070 116 268 1.6E-6 T 28-03-2018 AL549_RS09105 c42908de7e3f215c614c72fa742bd978 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 2.5E-26 T 28-03-2018 IPR032370 Flagellar assembly protein T, N-terminal AL549_RS00425 90d1565cf8b8df385445dd03d2e55fdc 134 Pfam PF04076 Bacterial OB fold (BOF) protein 36 133 1.2E-31 T 28-03-2018 IPR005220 Bacterial OB-fold AL549_RS00425 90d1565cf8b8df385445dd03d2e55fdc 134 SUPERFAMILY SSF101756 32 134 5.89E-33 T 28-03-2018 IPR005220 Bacterial OB-fold AL549_RS00425 90d1565cf8b8df385445dd03d2e55fdc 134 Gene3D G3DSA:2.40.50.200 28 134 3.5E-30 T 28-03-2018 AL549_RS16250 9346231326f35c4d4d8e2378fb91aab9 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 1.9E-18 T 28-03-2018 IPR025346 Protein of unknown function DUF4250 AL549_RS14095 0ec05a4efe870af8ffcfcf9c9aed06b3 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 8.8E-18 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS15845 fa9eb61698c43be25937c3738ddd8a7b 515 PRINTS PR00175 Sodium/alanine symporter signature 355 373 6.2E-48 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS15845 fa9eb61698c43be25937c3738ddd8a7b 515 PRINTS PR00175 Sodium/alanine symporter signature 237 255 6.2E-48 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS15845 fa9eb61698c43be25937c3738ddd8a7b 515 PRINTS PR00175 Sodium/alanine symporter signature 132 154 6.2E-48 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS15845 fa9eb61698c43be25937c3738ddd8a7b 515 PRINTS PR00175 Sodium/alanine symporter signature 265 284 6.2E-48 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS15845 fa9eb61698c43be25937c3738ddd8a7b 515 PRINTS PR00175 Sodium/alanine symporter signature 400 422 6.2E-48 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS15845 fa9eb61698c43be25937c3738ddd8a7b 515 PRINTS PR00175 Sodium/alanine symporter signature 461 481 6.2E-48 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS15845 fa9eb61698c43be25937c3738ddd8a7b 515 Pfam PF01235 Sodium:alanine symporter family 96 500 1.9E-133 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS15845 fa9eb61698c43be25937c3738ddd8a7b 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 58 492 2.3E-122 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL549_RS18460 54b514addfaf727f04f8db8d3fe1ad15 279 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 17 25 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL549_RS18460 54b514addfaf727f04f8db8d3fe1ad15 279 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 212 228 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL549_RS18460 54b514addfaf727f04f8db8d3fe1ad15 279 PIRSF PIRSF005902 2 279 6.8E-61 T 28-03-2018 IPR001130 TatD family GO:0016788 AL549_RS18460 54b514addfaf727f04f8db8d3fe1ad15 279 Gene3D G3DSA:3.20.20.140 15 279 5.1E-67 T 28-03-2018 AL549_RS18460 54b514addfaf727f04f8db8d3fe1ad15 279 SUPERFAMILY SSF51556 15 277 2.61E-69 T 28-03-2018 IPR032466 Metal-dependent hydrolase AL549_RS18460 54b514addfaf727f04f8db8d3fe1ad15 279 Pfam PF01026 TatD related DNase 18 276 1.8E-56 T 28-03-2018 IPR001130 TatD family GO:0016788 AL549_RS12930 057b6995d2d3b1011a5c8f8387a11d1f 160 Pfam PF10077 Uncharacterized protein conserved in bacteria (DUF2314) 37 153 3.7E-14 T 28-03-2018 IPR018756 Domain of unknown function DUF2314 AL549_RS15020 a6ced4e42802d4e2589b8bf7abc32b39 50 Pfam PF11665 Protein of unknown function (DUF3265) 17 44 1.7E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS01735 e0309848ab30948bf01b30203d6d0b2d 169 Pfam PF11012 Protein of unknown function (DUF2850) 60 139 6.5E-32 T 28-03-2018 IPR021271 Protein of unknown function DUF2850 AL549_RS06790 52edd85df7cc9385872f82c9a7dc9242 245 SUPERFAMILY SSF56300 6 226 2.04E-36 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS06790 52edd85df7cc9385872f82c9a7dc9242 245 Gene3D G3DSA:3.60.21.10 9 243 7.1E-29 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AL549_RS06790 52edd85df7cc9385872f82c9a7dc9242 245 Pfam PF00149 Calcineurin-like phosphoesterase 15 199 2.6E-12 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL549_RS00005 84cca6d81e4a31cbaed72ca579837f20 203 Gene3D G3DSA:3.80.10.10 9 200 1.8E-5 T 28-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like AL549_RS22175 d96a4bf616a690fdc6d4a891550a8447 104 Pfam PF12305 Protein of unknown function (DUF3630) 8 100 7.1E-38 T 28-03-2018 IPR022080 Protein of unknown function DUF3630 AL549_RS12945 915789565006400912827a4653a5fca0 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.2E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS01760 d54e44d999b4885c3a9d734f1999d63e 478 Pfam PF03600 Citrate transporter 46 421 9.5E-53 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AL549_RS14865 6f8890c07349c38b486be5b666f36e72 60 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 8.3E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS17705 131ff41f7fb853824665650f2af10fab 425 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 33 408 3.9E-135 T 28-03-2018 IPR020010 Conserved hypothetical protein CHP03503 AL549_RS02155 a78f3e9519d26a9c5c6bb0bbb45134ef 245 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 81 187 1.5E-13 T 28-03-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted AL549_RS21700 2e60d6130f0b4993b3de85bd305ff3a9 418 Gene3D G3DSA:3.90.1150.10 300 413 1.9E-18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL549_RS21700 2e60d6130f0b4993b3de85bd305ff3a9 418 Gene3D G3DSA:3.40.640.10 69 299 1.1E-35 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS21700 2e60d6130f0b4993b3de85bd305ff3a9 418 SUPERFAMILY SSF53383 13 410 6.46E-61 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS21700 2e60d6130f0b4993b3de85bd305ff3a9 418 Pfam PF00155 Aminotransferase class I and II 67 399 1.4E-26 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL549_RS05185 fd99d40652940e1e89669a180bea5db5 222 Pfam PF08887 GAD-like domain 9 111 2.0E-31 T 28-03-2018 IPR014983 GAD-related AL549_RS05185 fd99d40652940e1e89669a180bea5db5 222 Pfam PF08906 Domain of unknown function (DUF1851) 134 206 8.1E-13 T 28-03-2018 IPR015002 Domain of unknown function DUF1851 AL549_RS11215 3aaaf69fc396f093b395b3dba7d182d0 294 Pfam PF03649 Uncharacterised protein family (UPF0014) 40 279 5.3E-72 T 28-03-2018 IPR005226 UPF0014 family AL549_RS18335 c7f3d9453cc0687cef6929a41bf509cf 406 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 17 61 2.0E-10 T 28-03-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AL549_RS13015 2dbd3847b3275f2e93443b75fade548f 81 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.5E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS07745 d5eced9e0634134e9ed69e5e61f57afe 189 Gene3D G3DSA:1.20.120.520 3 162 4.2E-19 T 28-03-2018 AL549_RS07745 d5eced9e0634134e9ed69e5e61f57afe 189 Pfam PF01814 Hemerythrin HHE cation binding domain 8 141 2.3E-13 T 28-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AL549_RS10090 a187052160f702892328087f2372b22d 94 Pfam PF07023 Protein of unknown function (DUF1315) 4 84 2.4E-28 T 28-03-2018 IPR009749 Protein of unknown function DUF1315 AL549_RS02280 bc5daeb966cbc57d1752c5edbf3dd1b7 72 Pfam PF04982 HPP family 4 66 6.5E-17 T 28-03-2018 IPR007065 HPP AL549_RS01895 4903495fb869c984fd8db0ef787c62a6 81 Pfam PF11391 Protein of unknown function (DUF2798) 13 70 3.7E-18 T 28-03-2018 IPR021529 Protein of unknown function DUF2798 AL549_RS16330 12cfe5bc569d7f78e26904d37f659fdb 133 Gene3D G3DSA:3.10.450.50 2 133 1.5E-14 T 28-03-2018 AL549_RS16330 12cfe5bc569d7f78e26904d37f659fdb 133 Pfam PF12680 SnoaL-like domain 11 106 4.3E-8 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL549_RS16330 12cfe5bc569d7f78e26904d37f659fdb 133 SUPERFAMILY SSF54427 5 127 5.85E-32 T 28-03-2018 IPR032710 NTF2-like domain AL549_RS19680 2e3ec9c35fb6a33a2e191e427f49fe8b 258 Gene3D G3DSA:2.60.120.260 1 157 1.8E-10 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS19680 2e3ec9c35fb6a33a2e191e427f49fe8b 258 SUPERFAMILY SSF49785 2 156 3.4E-18 T 28-03-2018 IPR008979 Galactose-binding domain-like AL549_RS14090 f28f6e205cf3d27fb3507e761bc07ed0 25 Pfam PF11665 Protein of unknown function (DUF3265) 1 19 3.9E-7 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS01250 68a72db3c27a835a1be8e2e1965b5640 457 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 10 439 8.0E-137 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 AL549_RS01250 68a72db3c27a835a1be8e2e1965b5640 457 Gene3D G3DSA:1.20.1250.20 219 434 2.5E-7 T 28-03-2018 AL549_RS01250 68a72db3c27a835a1be8e2e1965b5640 457 Pfam PF13347 MFS/sugar transport protein 12 433 1.8E-93 T 28-03-2018 AL549_RS01250 68a72db3c27a835a1be8e2e1965b5640 457 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 61 86 - T 28-03-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 AL549_RS01250 68a72db3c27a835a1be8e2e1965b5640 457 SUPERFAMILY SSF103473 20 435 2.75E-30 T 28-03-2018 IPR020846 Major facilitator superfamily domain AL549_RS01250 68a72db3c27a835a1be8e2e1965b5640 457 Gene3D G3DSA:1.20.1250.20 9 218 1.5E-13 T 28-03-2018 AL549_RS03475 8e244b9f60f338a7e1b0de148f97dfc8 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 82 5.6E-14 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS03475 8e244b9f60f338a7e1b0de148f97dfc8 95 SUPERFAMILY SSF52794 1 86 9.94E-22 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL549_RS03475 8e244b9f60f338a7e1b0de148f97dfc8 95 Gene3D G3DSA:3.40.50.2300 1 92 8.9E-18 T 28-03-2018 AL549_RS00335 e344105f0c0dcc1c248fbee1f716f506 182 Pfam PF07155 ECF-type riboflavin transporter, S component 3 171 2.9E-43 T 28-03-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 AL549_RS00335 e344105f0c0dcc1c248fbee1f716f506 182 Hamap MF_01572 UPF0397 protein . 1 182 20.934 T 28-03-2018 IPR022914 Protein of unknown function UPF0397 AL549_RS03715 81634bb6fd1291b372ee5291cd6a0b01 155 Pfam PF10517 Electron transfer DM13 59 154 4.6E-19 T 28-03-2018 IPR019545 DM13 domain AL549_RS04370 ca22edbb3121d1325b5f39ae85291def 346 SUPERFAMILY SSF51004 85 329 1.12E-27 T 28-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain AL549_RS04370 ca22edbb3121d1325b5f39ae85291def 346 Gene3D G3DSA:2.130.10.10 280 337 0.0079 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL549_RS04370 ca22edbb3121d1325b5f39ae85291def 346 Gene3D G3DSA:2.130.10.10 4 279 1.4E-23 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL549_RS04370 ca22edbb3121d1325b5f39ae85291def 346 Pfam PF10282 Lactonase, 7-bladed beta-propeller 8 339 5.9E-97 T 28-03-2018 IPR019405 Lactonase, 7-bladed beta propeller AL549_RS04375 a56ad8ba1b6530f1fa767fa32cb04509 120 Pfam PF01042 Endoribonuclease L-PSP 33 114 2.0E-19 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AL549_RS04375 a56ad8ba1b6530f1fa767fa32cb04509 120 SUPERFAMILY SSF55298 1 116 1.73E-27 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL549_RS04375 a56ad8ba1b6530f1fa767fa32cb04509 120 Gene3D G3DSA:3.30.1330.40 2 120 9.8E-22 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL549_RS01415 b52e2011510a1a311c35353b187ad6ce 324 Gene3D G3DSA:1.10.3720.10 2 312 3.4E-30 T 28-03-2018 AL549_RS01415 b52e2011510a1a311c35353b187ad6ce 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 323 5.3E-35 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS01415 b52e2011510a1a311c35353b187ad6ce 324 SUPERFAMILY SSF161098 93 311 4.41E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS06580 52190a8313526b30337a05608c37d4c2 400 SUPERFAMILY SSF52540 150 341 1.88E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS06580 52190a8313526b30337a05608c37d4c2 400 Gene3D G3DSA:3.40.50.300 143 341 5.6E-13 T 28-03-2018 AL549_RS12575 63eb7a52aed7b7824ec3204b500e469e 286 SUPERFAMILY SSF161098 10 275 2.49E-54 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS12575 63eb7a52aed7b7824ec3204b500e469e 286 Gene3D G3DSA:1.10.3720.10 10 285 1.9E-44 T 28-03-2018 AL549_RS12575 63eb7a52aed7b7824ec3204b500e469e 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 7.0E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS19670 465e0e55c30bb6e2ee6fb3cc5914ec75 136 Pfam PF09834 Predicted membrane protein (DUF2061) 66 115 5.1E-20 T 28-03-2018 IPR018638 Domain of unknown function DUF2061, membrane AL549_RS19670 465e0e55c30bb6e2ee6fb3cc5914ec75 136 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 1.4E-21 T 28-03-2018 IPR018638 Domain of unknown function DUF2061, membrane AL549_RS17065 21096c1c9f51b2960a88ee10f1764577 274 SUPERFAMILY SSF53335 4 258 1.04E-45 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS17065 21096c1c9f51b2960a88ee10f1764577 274 PIRSF PIRSF018249 1 273 5.8E-85 T 28-03-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 AL549_RS17065 21096c1c9f51b2960a88ee10f1764577 274 Gene3D G3DSA:3.40.50.150 1 273 1.3E-52 T 28-03-2018 AL549_RS17065 21096c1c9f51b2960a88ee10f1764577 274 Pfam PF13847 Methyltransferase domain 88 225 9.6E-14 T 28-03-2018 IPR025714 Methyltransferase domain AL549_RS18355 3c3610d4a88f99bfd346babecba44750 448 Gene3D G3DSA:3.40.50.300 129 401 3.4E-15 T 28-03-2018 AL549_RS18355 3c3610d4a88f99bfd346babecba44750 448 SUPERFAMILY SSF52540 152 198 1.22E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS18355 3c3610d4a88f99bfd346babecba44750 448 SUPERFAMILY SSF52540 249 436 1.22E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS13945 2243ee15be8a6618fc4db2be5f38471f 171 Pfam PF14113 Type VI secretion system (T6SS), amidase effector protein 4 30 167 6.1E-26 T 28-03-2018 IPR025562 Type VI secretion system (T6SS), amidase effector protein 4 AL549_RS14810 2243ee15be8a6618fc4db2be5f38471f 171 Pfam PF14113 Type VI secretion system (T6SS), amidase effector protein 4 30 167 6.1E-26 T 28-03-2018 IPR025562 Type VI secretion system (T6SS), amidase effector protein 4 AL549_RS14895 745209746ba64871a817696bd82c1113 136 Gene3D G3DSA:3.40.140.10 1 131 4.7E-15 T 28-03-2018 AL549_RS14895 745209746ba64871a817696bd82c1113 136 SUPERFAMILY SSF53927 2 129 1.27E-25 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL549_RS07820 8cf9448c25b01ac24c42d64fdeb8967d 344 Pfam PF00248 Aldo/keto reductase family 15 335 6.4E-75 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL549_RS07820 8cf9448c25b01ac24c42d64fdeb8967d 344 Gene3D G3DSA:3.20.20.100 1 344 4.4E-95 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL549_RS07820 8cf9448c25b01ac24c42d64fdeb8967d 344 SUPERFAMILY SSF51430 1 337 4.71E-107 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL549_RS11815 3b70d717dac4a58a7e7763ec73731484 271 SUPERFAMILY SSF53850 44 254 1.19E-31 T 28-03-2018 AL549_RS11815 3b70d717dac4a58a7e7763ec73731484 271 Gene3D G3DSA:3.40.190.10 37 141 2.0E-10 T 28-03-2018 AL549_RS11815 3b70d717dac4a58a7e7763ec73731484 271 Gene3D G3DSA:3.40.190.10 142 220 4.3E-7 T 28-03-2018 AL549_RS11815 3b70d717dac4a58a7e7763ec73731484 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 253 5.9E-20 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS11815 3b70d717dac4a58a7e7763ec73731484 271 SMART SM00062 43 265 0.009 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL549_RS03030 91a561e5b01f0236563f708d54603d71 116 Pfam PF02001 Protein of unknown function DUF134 19 104 3.1E-19 T 28-03-2018 IPR002852 Uncharacterised protein family UPF0251 AL549_RS03030 91a561e5b01f0236563f708d54603d71 116 Hamap MF_00674 UPF0251 protein . 18 114 25.223 T 28-03-2018 IPR002852 Uncharacterised protein family UPF0251 AL549_RS03030 91a561e5b01f0236563f708d54603d71 116 Gene3D G3DSA:1.10.10.10 12 100 5.1E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS04290 9a5c83f83286ae4a14536419ed9467de 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 134 2.0E-11 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL549_RS04290 9a5c83f83286ae4a14536419ed9467de 139 SUPERFAMILY SSF54593 10 135 7.01E-23 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS04290 9a5c83f83286ae4a14536419ed9467de 139 Gene3D G3DSA:3.10.180.10 1 135 1.4E-23 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL549_RS12790 7d473d9897ae846127f0d05690f203c4 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 2.2E-113 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS12790 7d473d9897ae846127f0d05690f203c4 456 PIRSF PIRSF006603 5 454 7.2E-58 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS12790 7d473d9897ae846127f0d05690f203c4 456 Pfam PF01554 MatE 243 403 7.0E-35 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS12790 7d473d9897ae846127f0d05690f203c4 456 Pfam PF01554 MatE 17 176 5.5E-34 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL549_RS10315 8d3c483e0430782943609ee67af874b7 115 SUPERFAMILY SSF47226 2 107 6.15E-22 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS10315 8d3c483e0430782943609ee67af874b7 115 Gene3D G3DSA:1.20.120.160 1 112 6.3E-14 T 28-03-2018 AL549_RS10315 8d3c483e0430782943609ee67af874b7 115 Pfam PF01627 Hpt domain 24 102 1.0E-11 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL549_RS15995 d3a286e18e1f239ef8a4f9ce9c8522f4 341 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 3 341 36.316 T 28-03-2018 IPR006507 Uncharacterised protein family UPF0283 AL549_RS15995 d3a286e18e1f239ef8a4f9ce9c8522f4 341 Pfam PF05128 Domain of unknown function (DUF697) 176 334 5.0E-52 T 28-03-2018 IPR021147 Protein of unknown function DUF697 AL549_RS15995 d3a286e18e1f239ef8a4f9ce9c8522f4 341 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 61 334 8.3E-80 T 28-03-2018 IPR006507 Uncharacterised protein family UPF0283 AL549_RS22880 6cae76209ffde674954956d874b39a6b 345 SUPERFAMILY SSF55729 9 137 6.68E-5 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS22880 6cae76209ffde674954956d874b39a6b 345 Gene3D G3DSA:3.40.630.30 2 181 0.3 T 28-03-2018 AL549_RS01410 48b918ee96be2560a17e944c86dc2c8d 330 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 123 308 1.9E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS01410 48b918ee96be2560a17e944c86dc2c8d 330 SUPERFAMILY SSF161098 99 287 5.49E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS01410 48b918ee96be2560a17e944c86dc2c8d 330 Gene3D G3DSA:1.10.3720.10 25 297 4.4E-35 T 28-03-2018 AL549_RS05190 bd72a4f0dfe7aa5ad151791b1d7b2615 111 SUPERFAMILY SSF160424 2 99 8.5E-12 T 28-03-2018 IPR006728 Protein of unknown function DUF600 AL549_RS05190 bd72a4f0dfe7aa5ad151791b1d7b2615 111 Gene3D G3DSA:3.30.500.20 2 98 3.9E-10 T 28-03-2018 AL549_RS19865 ab3338494e0afd1fd6da17ae9daeeda5 215 SMART SM00421 152 209 8.2E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS19865 ab3338494e0afd1fd6da17ae9daeeda5 215 SUPERFAMILY SSF46894 145 211 4.42E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL549_RS19865 ab3338494e0afd1fd6da17ae9daeeda5 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 5.9E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS19865 ab3338494e0afd1fd6da17ae9daeeda5 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 5.9E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS19865 ab3338494e0afd1fd6da17ae9daeeda5 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 5.9E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS19865 ab3338494e0afd1fd6da17ae9daeeda5 215 Gene3D G3DSA:1.10.10.10 115 214 2.2E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS19865 ab3338494e0afd1fd6da17ae9daeeda5 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 4.0E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL549_RS06600 1469803629828fc957ac3f541e882f0b 71 Pfam PF04964 Flp/Fap pilin component 19 63 2.0E-12 T 28-03-2018 IPR007047 Flp/Fap pilin component AL549_RS04195 ab511063da5fe95efdbdd024e548cf47 322 Pfam PF13280 WYL domain 157 310 3.7E-19 T 28-03-2018 IPR026881 WYL domain AL549_RS12715 ab2c58286d5f29116fde35d1abd8948d 239 Gene3D G3DSA:3.40.50.300 2 237 1.2E-48 T 28-03-2018 AL549_RS12715 ab2c58286d5f29116fde35d1abd8948d 239 SMART SM00382 29 213 1.1E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AL549_RS12715 ab2c58286d5f29116fde35d1abd8948d 239 SUPERFAMILY SSF52540 5 217 2.77E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL549_RS12715 ab2c58286d5f29116fde35d1abd8948d 239 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL549_RS12715 ab2c58286d5f29116fde35d1abd8948d 239 Pfam PF00005 ABC transporter 25 165 1.4E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL549_RS01580 77a8c5cc5c8dbc3f566615667e10186d 195 Pfam PF01810 LysE type translocator 17 188 7.3E-15 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL549_RS06890 4236376b71b794d53a03d69ac6d7f3cf 203 SUPERFAMILY SSF56784 11 198 8.54E-35 T 28-03-2018 IPR023214 HAD-like domain AL549_RS06890 4236376b71b794d53a03d69ac6d7f3cf 203 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 13 165 3.8E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS06890 4236376b71b794d53a03d69ac6d7f3cf 203 Gene3D G3DSA:3.40.50.1000 9 201 8.8E-28 T 28-03-2018 IPR023214 HAD-like domain AL549_RS06890 4236376b71b794d53a03d69ac6d7f3cf 203 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 172 5.4E-12 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL549_RS06890 4236376b71b794d53a03d69ac6d7f3cf 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 171 1.4E-18 T 28-03-2018 IPR023214 HAD-like domain AL549_RS13060 8402df61d5959b58abdc5b3b82a0d703 44 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 5.0E-11 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS06320 bd53b90f392d2fa1e0b6d22f81a86dbd 275 Gene3D G3DSA:3.40.190.10 19 110 3.7E-4 T 28-03-2018 AL549_RS06320 bd53b90f392d2fa1e0b6d22f81a86dbd 275 Gene3D G3DSA:3.40.190.10 220 271 0.0017 T 28-03-2018 AL549_RS06320 bd53b90f392d2fa1e0b6d22f81a86dbd 275 Gene3D G3DSA:3.40.190.10 111 219 3.1E-34 T 28-03-2018 AL549_RS06320 bd53b90f392d2fa1e0b6d22f81a86dbd 275 Pfam PF12849 PBP superfamily domain 22 253 1.5E-35 T 28-03-2018 IPR024370 PBP domain AL549_RS06320 bd53b90f392d2fa1e0b6d22f81a86dbd 275 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 21 268 3.9E-65 T 28-03-2018 IPR011862 Phosphate binding protein GO:0006810 AL549_RS06320 bd53b90f392d2fa1e0b6d22f81a86dbd 275 SUPERFAMILY SSF53850 24 271 7.03E-64 T 28-03-2018 AL549_RS18310 87511269ce24318de9bd556fe01facb7 321 Pfam PF00482 Type II secretion system (T2SS), protein F 154 279 9.9E-19 T 28-03-2018 IPR018076 Type II secretion system F domain AL549_RS13185 249a27566a37c0659fc9e8e0b8049849 215 SUPERFAMILY SSF52833 2 83 2.24E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS13185 249a27566a37c0659fc9e8e0b8049849 215 Pfam PF00043 Glutathione S-transferase, C-terminal domain 127 192 4.1E-8 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL549_RS13185 249a27566a37c0659fc9e8e0b8049849 215 Gene3D G3DSA:3.40.30.10 2 89 3.5E-19 T 28-03-2018 AL549_RS13185 249a27566a37c0659fc9e8e0b8049849 215 Gene3D G3DSA:1.20.1050.10 90 215 4.1E-17 T 28-03-2018 AL549_RS13185 249a27566a37c0659fc9e8e0b8049849 215 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 72 3.7E-14 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL549_RS13185 249a27566a37c0659fc9e8e0b8049849 215 SUPERFAMILY SSF47616 80 206 8.91E-20 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL549_RS21330 edeb672323c34a6e27dd70db51e50849 71 Pfam PF13627 Prokaryotic lipoprotein-attachment site 39 61 2.1E-8 T 28-03-2018 IPR032831 Prokaryotic lipoprotein-attachment site AL549_RS10015 e7c497721520b662880ac4374a349502 288 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 3.8E-94 T 28-03-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247 AL549_RS10015 e7c497721520b662880ac4374a349502 288 Gene3D G3DSA:3.10.129.10 2 116 4.1E-40 T 28-03-2018 AL549_RS10015 e7c497721520b662880ac4374a349502 288 Gene3D G3DSA:3.10.129.10 131 286 1.0E-54 T 28-03-2018 AL549_RS10015 e7c497721520b662880ac4374a349502 288 Pfam PF13622 Thioesterase-like superfamily 33 282 9.8E-60 T 28-03-2018 AL549_RS10015 e7c497721520b662880ac4374a349502 288 SUPERFAMILY SSF54637 116 283 7.88E-59 T 28-03-2018 IPR029069 HotDog domain AL549_RS10015 e7c497721520b662880ac4374a349502 288 SUPERFAMILY SSF54637 6 114 6.67E-39 T 28-03-2018 IPR029069 HotDog domain AL549_RS23480 426b346222c43b10611bf037a1cb1053 262 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 8 260 2.7E-97 T 28-03-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AL549_RS23480 426b346222c43b10611bf037a1cb1053 262 Pfam PF02405 Permease MlaE 47 258 3.3E-75 T 28-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AL549_RS14495 e3ce93d1b0583d1dfc9a6bddc44ccf43 159 Pfam PF04970 Lecithin retinol acyltransferase 37 102 4.3E-9 T 28-03-2018 IPR007053 LRAT-like domain AL549_RS13165 93709596ad4033624196309dfc4708cf 158 Pfam PF13673 Acetyltransferase (GNAT) domain 37 137 1.8E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AL549_RS13165 93709596ad4033624196309dfc4708cf 158 Gene3D G3DSA:3.40.630.30 1 158 1.1E-19 T 28-03-2018 AL549_RS13165 93709596ad4033624196309dfc4708cf 158 SUPERFAMILY SSF55729 3 154 6.03E-26 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL549_RS11270 f207aa5a323212376bbc47317d2e8350 260 Pfam PF11150 Protein of unknown function (DUF2927) 33 230 1.6E-64 T 28-03-2018 IPR021323 Protein of unknown function DUF2927 AL549_RS19305 291c67763b3b2703d13096b9a8442179 230 Pfam PF04402 Protein of unknown function (DUF541) 30 227 1.4E-42 T 28-03-2018 IPR007497 Protein of unknown function DUF541 AL549_RS17455 e2859501169417104c8d666484ef6c60 682 Pfam PF02120 Flagellar hook-length control protein FliK 553 636 8.7E-25 T 28-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal AL549_RS10355 c2349a08b5ea724374657ba0f393e67e 306 SUPERFAMILY SSF161098 89 291 6.0E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS10355 c2349a08b5ea724374657ba0f393e67e 306 Gene3D G3DSA:1.10.3720.10 2 294 5.9E-42 T 28-03-2018 AL549_RS10355 c2349a08b5ea724374657ba0f393e67e 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.1E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS12250 18a9e862787580aeac10cad5b5e24e3a 477 Pfam PF13807 G-rich domain on putative tyrosine kinase 362 442 1.3E-6 T 28-03-2018 IPR032807 Tyrosine kinase, G-rich domain AL549_RS12250 18a9e862787580aeac10cad5b5e24e3a 477 Gene3D G3DSA:3.30.1890.10 38 418 1.4E-11 T 28-03-2018 AL549_RS19375 0bec567528fa752e096b88dceb65a1a0 243 Gene3D G3DSA:2.40.240.20 1 73 2.2E-20 T 28-03-2018 AL549_RS19375 0bec567528fa752e096b88dceb65a1a0 243 Gene3D G3DSA:3.40.1280.10 74 243 1.0E-56 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL549_RS19375 0bec567528fa752e096b88dceb65a1a0 243 Pfam PF04452 RNA methyltransferase 19 236 1.2E-74 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL549_RS19375 0bec567528fa752e096b88dceb65a1a0 243 PIRSF PIRSF015601 2 242 2.4E-55 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL549_RS19375 0bec567528fa752e096b88dceb65a1a0 243 SUPERFAMILY SSF75217 75 242 5.23E-52 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AL549_RS19375 0bec567528fa752e096b88dceb65a1a0 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 2.2E-84 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL549_RS19375 0bec567528fa752e096b88dceb65a1a0 243 SUPERFAMILY SSF88697 2 70 8.45E-17 T 28-03-2018 IPR015947 PUA-like domain AL549_RS20030 58c4da4f38ffe07448b61855f7d9f90f 403 Pfam PF01103 Surface antigen 133 376 1.3E-10 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AL549_RS20030 58c4da4f38ffe07448b61855f7d9f90f 403 Gene3D G3DSA:2.40.160.50 42 403 1.6E-34 T 28-03-2018 AL549_RS10940 e6fdfdfc0a2708a8fc666ea4b3ec0604 132 Gene3D G3DSA:1.10.10.10 60 131 1.6E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL549_RS14605 50ad3d16865bf07c6794f47698e14bf0 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 4.7E-18 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS22625 4c161ea6f02eb1af29cae267865698b2 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 133 3.5E-32 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AL549_RS17640 7e0cb0fcb025ff4d5d8e441c4804bc1b 403 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 2.3E-68 T 28-03-2018 IPR018642 Protein of unknown function DUF2066 AL549_RS15970 fd5fb894fea926f45aab13344949f83a 472 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 461 4.5E-77 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL549_RS15970 fd5fb894fea926f45aab13344949f83a 472 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 462 3.7E-49 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL549_RS15970 fd5fb894fea926f45aab13344949f83a 472 PIRSF PIRSF002457 1 472 2.0E-116 T 28-03-2018 IPR030676 Citrate carrier CitT-related AL549_RS23340 499200c27f4205ee506394dc1192c0d0 69 Pfam PF06526 Protein of unknown function (DUF1107) 2 64 8.8E-27 T 28-03-2018 IPR009491 Protein of unknown function DUF1107 AL549_RS23340 499200c27f4205ee506394dc1192c0d0 69 Gene3D G3DSA:3.30.1910.10 2 63 1.1E-26 T 28-03-2018 AL549_RS23340 499200c27f4205ee506394dc1192c0d0 69 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 2.0E-32 T 28-03-2018 IPR009491 Protein of unknown function DUF1107 AL549_RS17720 aa49b7564540c397a034b9ff7c9cb2de 255 Gene3D G3DSA:3.40.50.150 53 216 1.5E-19 T 28-03-2018 AL549_RS17720 aa49b7564540c397a034b9ff7c9cb2de 255 SUPERFAMILY SSF53335 73 212 1.54E-20 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL549_RS17720 aa49b7564540c397a034b9ff7c9cb2de 255 Pfam PF08241 Methyltransferase domain 74 125 2.9E-9 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AL549_RS20680 37b49aa0f49ed93a96b39f62411c9755 467 Pfam PF01145 SPFH domain / Band 7 family 45 296 6.1E-37 T 28-03-2018 IPR001107 Band 7 domain AL549_RS20650 0ed7a2ede47460160c1a6f053ce84609 122 Pfam PF04892 VanZ like family 29 106 9.1E-10 T 28-03-2018 IPR006976 VanZ-like AL549_RS11620 81dadb10b7b620067e110cffd64a7370 274 Pfam PF10977 Protein of unknown function (DUF2797) 38 270 1.4E-95 T 28-03-2018 IPR021246 Protein of unknown function DUF2797 AL549_RS11940 b4e3f8e2251f6be2fb79bb0ff5fa8844 171 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 26 162 2.3E-18 T 28-03-2018 IPR009936 Protein of unknown function DUF1468 AL549_RS07485 46216c0c2e2a8a1fb30332ab99179c66 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 120 9.4E-35 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 AL549_RS07485 46216c0c2e2a8a1fb30332ab99179c66 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 23.829 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 AL549_RS07485 46216c0c2e2a8a1fb30332ab99179c66 122 Gene3D G3DSA:3.40.1350.10 13 122 1.9E-32 T 28-03-2018 AL549_RS07485 46216c0c2e2a8a1fb30332ab99179c66 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 9.7E-27 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 AL549_RS07485 46216c0c2e2a8a1fb30332ab99179c66 122 SUPERFAMILY SSF52980 8 112 1.07E-20 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL549_RS17915 ca774c5e5ae8a4a53fe40ff5caaaf27c 419 Gene3D G3DSA:3.40.50.980 130 254 1.7E-5 T 28-03-2018 AL549_RS17915 ca774c5e5ae8a4a53fe40ff5caaaf27c 419 TIGRFAM TIGR02304 aden_form_hyp: putative adenylate-forming enzyme 4 391 6.1E-112 T 28-03-2018 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related AL549_RS19665 1329799cf14d9acf311464cca0bfcdec 390 Pfam PF05987 Bacterial protein of unknown function (DUF898) 8 382 1.0E-95 T 28-03-2018 IPR010295 Protein of unknown function DUF898 AL549_RS10890 5c3b949c0a0db78774c1530e832a303e 1365 SUPERFAMILY SSF55486 556 635 3.8E-12 T 28-03-2018 AL549_RS10890 5c3b949c0a0db78774c1530e832a303e 1365 SUPERFAMILY SSF55486 304 378 3.8E-12 T 28-03-2018 AL549_RS10890 5c3b949c0a0db78774c1530e832a303e 1365 Pfam PF16313 Met-zincin 566 619 8.3E-8 T 28-03-2018 IPR032534 Domain of unknown function DUF4953 AL549_RS10890 5c3b949c0a0db78774c1530e832a303e 1365 Gene3D G3DSA:3.40.390.10 243 638 7.0E-13 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AL549_RS20780 221d2b1161b1ca5631e480aab05dd629 207 Pfam PF01914 MarC family integral membrane protein 3 204 7.6E-45 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL549_RS20780 221d2b1161b1ca5631e480aab05dd629 207 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 202 4.5E-41 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL549_RS14985 23c0eef6cc6edc88b2b309e520070b74 47 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 3.5E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS23525 741ec99b1f915c17ac4a3bf4fa075460 322 Pfam PF16868 NMT1-like family 30 319 1.7E-96 T 28-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL549_RS23525 741ec99b1f915c17ac4a3bf4fa075460 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 11 319 2.1E-112 T 28-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL549_RS23525 741ec99b1f915c17ac4a3bf4fa075460 322 Gene3D G3DSA:3.40.190.10 172 321 2.8E-41 T 28-03-2018 AL549_RS23525 741ec99b1f915c17ac4a3bf4fa075460 322 Gene3D G3DSA:3.40.190.10 22 171 3.5E-26 T 28-03-2018 AL549_RS23525 741ec99b1f915c17ac4a3bf4fa075460 322 SUPERFAMILY SSF53850 25 321 1.68E-88 T 28-03-2018 AL549_RS16040 21a516b04c8d735eb7e9ab40e31fb062 417 Pfam PF03222 Tryptophan/tyrosine permease family 28 413 9.1E-18 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AL549_RS08295 cf62bf01b1363bf84f4247440a383488 204 PIRSF PIRSF006170 1 204 4.4E-52 T 28-03-2018 IPR026039 Uncharacterised protein family UPF0070 AL549_RS08295 cf62bf01b1363bf84f4247440a383488 204 Gene3D G3DSA:1.25.40.10 38 202 3.2E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL549_RS08295 cf62bf01b1363bf84f4247440a383488 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 7.0E-53 T 28-03-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 AL549_RS20015 951d73aa55a889fc3c8e1aef13cc6a58 153 Gene3D G3DSA:3.40.1550.10 1 153 4.9E-33 T 28-03-2018 IPR028976 CheC-like domain AL549_RS20015 951d73aa55a889fc3c8e1aef13cc6a58 153 SUPERFAMILY SSF103039 1 153 7.19E-38 T 28-03-2018 IPR028976 CheC-like domain AL549_RS20015 951d73aa55a889fc3c8e1aef13cc6a58 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 5.1E-22 T 28-03-2018 IPR028051 Chemotaxis phosphatase CheX-like domain AL549_RS02775 67c085925496c38085af13fbf4a28446 324 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 3.3E-183 T 28-03-2018 IPR015004 Protein of unknown function DUF1852 AL549_RS02775 67c085925496c38085af13fbf4a28446 324 PIRSF PIRSF034367 1 324 3.2E-199 T 28-03-2018 IPR015004 Protein of unknown function DUF1852 AL549_RS17605 ef139e72be34bd258a5cc0335153157f 156 SUPERFAMILY SSF52833 3 154 3.8E-48 T 28-03-2018 IPR012336 Thioredoxin-like fold AL549_RS17605 ef139e72be34bd258a5cc0335153157f 156 Pfam PF00578 AhpC/TSA family 7 134 2.8E-35 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL549_RS17605 ef139e72be34bd258a5cc0335153157f 156 PIRSF PIRSF000239 1 147 7.6E-18 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL549_RS17605 ef139e72be34bd258a5cc0335153157f 156 Gene3D G3DSA:3.40.30.10 1 156 9.0E-39 T 28-03-2018 AL549_RS04275 21f94fce134e93ae72723983ba49b274 135 Pfam PF12614 Ribosome recycling factor 9 133 4.4E-56 T 28-03-2018 IPR022253 Ribosome recycling factor. bacterial AL549_RS05855 6a849962a776eaa58dd96b1b0d569c45 263 Pfam PF01435 Peptidase family M48 62 246 1.5E-46 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL549_RS05855 6a849962a776eaa58dd96b1b0d569c45 263 Gene3D G3DSA:3.30.2010.10 46 144 2.7E-25 T 28-03-2018 AL549_RS02005 78102fe45549c2d7b51b4e9cc593e728 214 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 26 185 29.087 T 28-03-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AL549_RS02005 78102fe45549c2d7b51b4e9cc593e728 214 Pfam PF03975 CheD chemotactic sensory transduction 84 181 5.6E-30 T 28-03-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AL549_RS02005 78102fe45549c2d7b51b4e9cc593e728 214 SUPERFAMILY SSF64438 30 186 2.29E-48 T 28-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AL549_RS08675 03fe7394b625bb55505f5f5914148b96 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 1.2E-21 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL549_RS08675 03fe7394b625bb55505f5f5914148b96 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 28-03-2018 IPR000540 Flagellar motor protein MotA, conserved site AL549_RS11065 0334f2ebc8e8922f2751bc0aecc1c0c5 177 Pfam PF12915 Protein of unknown function (DUF3833) 17 176 4.0E-66 T 28-03-2018 IPR024409 Protein of unknown function DUF3833 AL549_RS15585 c2e82fc6ad6b3e3392aea1885f5feca4 280 Pfam PF03280 Proteobacterial lipase chaperone protein 86 267 5.9E-45 T 28-03-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 AL549_RS15585 c2e82fc6ad6b3e3392aea1885f5feca4 280 Hamap MF_00790 Lipase chaperone [lifO]. 1 275 17.22 T 28-03-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 AL549_RS15585 c2e82fc6ad6b3e3392aea1885f5feca4 280 SUPERFAMILY SSF158855 34 278 1.15E-55 T 28-03-2018 AL549_RS17815 7ac532564d553f5932af0ca271201f95 282 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 240 266 - T 28-03-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 AL549_RS17815 7ac532564d553f5932af0ca271201f95 282 Pfam PF01148 Cytidylyltransferase family 4 282 5.2E-68 T 28-03-2018 AL549_RS03795 7d884435ddc52aea277e439b6dc7438b 251 Pfam PF02754 Cysteine-rich domain 11 91 1.7E-11 T 28-03-2018 IPR004017 Cysteine-rich domain AL549_RS03795 7d884435ddc52aea277e439b6dc7438b 251 Pfam PF02754 Cysteine-rich domain 139 223 3.9E-12 T 28-03-2018 IPR004017 Cysteine-rich domain AL549_RS14035 211b7192075cda03a106cfe5bb75b9ea 49 Pfam PF11665 Protein of unknown function (DUF3265) 22 49 1.0E-13 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS06550 0097908353663023f994479cdf6ea5de 193 Pfam PF16964 Putative tight adherence pilin protein F 2 171 2.9E-27 T 28-03-2018 IPR031582 Putative tight adherence pilin protein F AL549_RS07325 64ac7180c6401381f6a82f8131f8a5b7 343 Gene3D G3DSA:1.10.3470.10 3 343 1.9E-70 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL549_RS07325 64ac7180c6401381f6a82f8131f8a5b7 343 Pfam PF01032 FecCD transport family 19 336 3.2E-86 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL549_RS07325 64ac7180c6401381f6a82f8131f8a5b7 343 SUPERFAMILY SSF81345 6 337 1.19E-79 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AL549_RS03200 a44955835825c54cf601f6adad968df8 253 Gene3D G3DSA:3.40.50.720 2 251 3.7E-68 T 28-03-2018 AL549_RS03200 a44955835825c54cf601f6adad968df8 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 1.3E-134 T 28-03-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 AL549_RS03200 a44955835825c54cf601f6adad968df8 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL549_RS03200 a44955835825c54cf601f6adad968df8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.0E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS03200 a44955835825c54cf601f6adad968df8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.0E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS03200 a44955835825c54cf601f6adad968df8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.0E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS03200 a44955835825c54cf601f6adad968df8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.0E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS03200 a44955835825c54cf601f6adad968df8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.0E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS03200 a44955835825c54cf601f6adad968df8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.0E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS03200 a44955835825c54cf601f6adad968df8 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 1.2E-60 T 28-03-2018 AL549_RS03200 a44955835825c54cf601f6adad968df8 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 8.4E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS03200 a44955835825c54cf601f6adad968df8 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.4E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS03200 a44955835825c54cf601f6adad968df8 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.4E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL549_RS03200 a44955835825c54cf601f6adad968df8 253 SUPERFAMILY SSF51735 9 251 1.62E-77 T 28-03-2018 IPR016040 NAD(P)-binding domain AL549_RS09410 22783c04f8856ed67c4e723b4c423fb0 177 Gene3D G3DSA:3.40.50.360 74 175 4.1E-21 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS09410 22783c04f8856ed67c4e723b4c423fb0 177 Gene3D G3DSA:3.40.50.360 1 73 3.4E-16 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS09410 22783c04f8856ed67c4e723b4c423fb0 177 PIRSF PIRSF038996 1 174 2.0E-64 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 AL549_RS09410 22783c04f8856ed67c4e723b4c423fb0 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AL549_RS09410 22783c04f8856ed67c4e723b4c423fb0 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 2.7E-69 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 AL549_RS09410 22783c04f8856ed67c4e723b4c423fb0 177 Pfam PF00258 Flavodoxin 6 162 1.2E-32 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL549_RS09410 22783c04f8856ed67c4e723b4c423fb0 177 SUPERFAMILY SSF52218 4 173 1.47E-50 T 28-03-2018 IPR029039 Flavoprotein-like domain AL549_RS06785 832029408a938c6bae5418fb9d146e2a 237 Pfam PF01925 Sulfite exporter TauE/SafE 10 230 1.2E-21 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL549_RS04460 c5ad9df3572fcb3473adb84f6f604106 210 Pfam PF01810 LysE type translocator 16 205 9.3E-27 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL549_RS04460 c5ad9df3572fcb3473adb84f6f604106 210 PIRSF PIRSF006324 1 209 1.3E-55 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL549_RS20045 e1fe0accdb18075ad06a5621ef5de14c 255 Gene3D G3DSA:2.40.160.10 5 222 8.9E-5 T 28-03-2018 AL549_RS20045 e1fe0accdb18075ad06a5621ef5de14c 255 Pfam PF04338 Protein of unknown function, DUF481 40 255 3.0E-51 T 28-03-2018 IPR007433 Protein of unknown function DUF481 AL549_RS09115 2a8eb4f63c254f0ddabe4ac089673d04 143 PIRSF PIRSF028687 1 143 7.7E-59 T 28-03-2018 IPR007293 Flagellar protein FlgP AL549_RS09115 2a8eb4f63c254f0ddabe4ac089673d04 143 Pfam PF02169 LPP20 lipoprotein 21 118 8.5E-8 T 28-03-2018 IPR024952 Lipoprotein LPP20-like AL549_RS09255 b47c5d6cebb57791773b71d88a82a5b2 431 Gene3D G3DSA:2.40.160.10 2 431 3.0E-30 T 28-03-2018 AL549_RS14435 92832eb1889e82f7ddf827a0a5bd771f 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.8E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS14390 b34696038e2b51b5d5aca470b2ef0089 30 Pfam PF11665 Protein of unknown function (DUF3265) 9 29 1.6E-8 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS12155 15300eaf5d6deff364537961cb86d924 381 Pfam PF12698 ABC-2 family transporter protein 22 366 5.5E-39 T 28-03-2018 AL549_RS12155 15300eaf5d6deff364537961cb86d924 381 Gene3D G3DSA:3.40.1710.10 38 199 5.0E-25 T 28-03-2018 AL549_RS13390 2fc2076a09ae11fc3d4ac65669ea9907 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.1E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS00380 9235aa7c9977b2b2e704604034e1fc95 115 SUPERFAMILY SSF47413 5 87 7.41E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL549_RS00380 9235aa7c9977b2b2e704604034e1fc95 115 Gene3D G3DSA:1.10.260.40 5 76 3.2E-5 T 28-03-2018 AL549_RS16525 3f0b8ee96721372a2123abc53e780b60 501 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 183 3.6E-59 T 28-03-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices AL549_RS16525 3f0b8ee96721372a2123abc53e780b60 501 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 4.9E-108 T 28-03-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase AL549_RS13840 4b96a530300bceeb174f42e307f93b19 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 4.4E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS07510 f343ccb3b94d40dce0abf58ebe97fb37 105 Pfam PF04999 Cell division protein FtsL 8 103 9.7E-37 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AL549_RS07510 f343ccb3b94d40dce0abf58ebe97fb37 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 20 103 1.6E-27 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AL549_RS07510 f343ccb3b94d40dce0abf58ebe97fb37 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 16.39 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AL549_RS14455 b9e2e1ccbe4bb8955f817c610c7c507e 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 8.5E-18 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS14705 8bb383992f16ac20ae4e0147a6149f72 59 Pfam PF11665 Protein of unknown function (DUF3265) 32 59 7.8E-11 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS19740 04538815a9563733096e21060e02e1c3 274 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 28-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AL549_RS19740 04538815a9563733096e21060e02e1c3 274 SUPERFAMILY SSF56317 3 263 7.59E-84 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL549_RS19740 04538815a9563733096e21060e02e1c3 274 Pfam PF00795 Carbon-nitrogen hydrolase 3 255 1.5E-58 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL549_RS19740 04538815a9563733096e21060e02e1c3 274 Gene3D G3DSA:3.60.110.10 2 272 3.3E-81 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL549_RS00805 f54dec2a0f49d3a35705821a7809676c 632 SUPERFAMILY SSF53383 47 192 2.71E-57 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS00805 f54dec2a0f49d3a35705821a7809676c 632 SUPERFAMILY SSF53383 221 592 2.71E-57 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL549_RS00805 f54dec2a0f49d3a35705821a7809676c 632 Gene3D G3DSA:3.40.640.10 124 473 4.6E-26 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL549_RS00805 f54dec2a0f49d3a35705821a7809676c 632 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 297 449 1.1E-6 T 28-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AL549_RS17435 97031e83330a60d2bf47e06bd584626c 140 Pfam PF04347 Flagellar biosynthesis protein, FliO 58 136 1.3E-18 T 28-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AL549_RS17435 97031e83330a60d2bf47e06bd584626c 140 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 46 113 1.6E-21 T 28-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AL549_RS01215 59921e6c221124cb7e975180f3f1aca9 251 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 22 245 1.9E-88 T 28-03-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family AL549_RS23560 53a6d6fcc05727dc5ee05d5462081655 255 Pfam PF06738 Putative threonine/serine exporter 10 247 5.2E-68 T 28-03-2018 IPR010619 Putative threonine/serine exporter AL549_RS14045 9567da9a42afbab1a1236e0ff7dbeb0d 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 3.0E-18 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS22715 6e0d8c40b0a4cde695e778a76f3c4115 312 PIRSF PIRSF026649 4 307 2.6E-78 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL549_RS22715 6e0d8c40b0a4cde695e778a76f3c4115 312 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 7 298 8.5E-76 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL549_RS22715 6e0d8c40b0a4cde695e778a76f3c4115 312 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 309 46.801 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AL549_RS22715 6e0d8c40b0a4cde695e778a76f3c4115 312 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 7 305 1.8E-129 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AL549_RS02995 9dc73918415e8a3e4eef347c0d08f1f9 241 Gene3D G3DSA:2.40.160.20 38 237 0.0039 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS06805 fefd6f68c4b2d8941ecbeb395857f7b0 124 Pfam PF07238 PilZ domain 9 106 2.3E-8 T 28-03-2018 IPR009875 PilZ domain GO:0035438 AL549_RS06805 fefd6f68c4b2d8941ecbeb395857f7b0 124 Gene3D G3DSA:2.40.10.220 3 124 6.6E-10 T 28-03-2018 AL549_RS15110 23bfbd0c7df22dfa8340a1a7c89a0fd7 81 Gene3D G3DSA:1.10.1220.10 30 73 5.9E-9 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL549_RS23470 7edc1c76c003893d7f2785087d612f3c 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 1.2E-83 T 28-03-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 AL549_RS23470 7edc1c76c003893d7f2785087d612f3c 321 Pfam PF01699 Sodium/calcium exchanger protein 5 143 1.4E-27 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AL549_RS23470 7edc1c76c003893d7f2785087d612f3c 321 Pfam PF01699 Sodium/calcium exchanger protein 175 316 2.0E-29 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AL549_RS14190 ae7de35e32e9e53ab4e0279619380d41 49 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 3.8E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS20130 d3de7f7457288abd947325daa5b5b38a 90 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 6.5E-36 T 28-03-2018 IPR022072 Protein of unknown function DUF3624 AL549_RS18385 9414fcddb3adf88aa526f08d86602bdf 67 Pfam PF06568 Domain of unknown function (DUF1127) 26 58 4.2E-8 T 28-03-2018 IPR009506 Protein of unknown function DUF1127 AL549_RS10395 72de13d4d0cade79885b1b30d4821651 187 Pfam PF04279 Intracellular septation protein A 1 174 1.0E-68 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AL549_RS10395 72de13d4d0cade79885b1b30d4821651 187 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 176 2.6E-64 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AL549_RS10395 72de13d4d0cade79885b1b30d4821651 187 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.496 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AL549_RS15945 36319db620ac91eb8c6c17d941ebd888 292 Pfam PF03547 Membrane transport protein 172 284 1.1E-7 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AL549_RS15945 36319db620ac91eb8c6c17d941ebd888 292 Pfam PF03547 Membrane transport protein 6 157 5.2E-7 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AL549_RS15510 3fde8fbb986d1fcf4fc00f80cdc6bd13 1285 Pfam PF16313 Met-zincin 565 786 2.5E-6 T 28-03-2018 IPR032534 Domain of unknown function DUF4953 AL549_RS15510 3fde8fbb986d1fcf4fc00f80cdc6bd13 1285 Gene3D G3DSA:3.40.390.10 213 643 1.0E-15 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AL549_RS15510 3fde8fbb986d1fcf4fc00f80cdc6bd13 1285 SUPERFAMILY SSF55486 257 373 7.11E-16 T 28-03-2018 AL549_RS15510 3fde8fbb986d1fcf4fc00f80cdc6bd13 1285 SUPERFAMILY SSF55486 561 640 7.11E-16 T 28-03-2018 AL549_RS04595 f30aadf315fb4e90d5df383ae8bc016f 412 Pfam PF01566 Natural resistance-associated macrophage protein 56 378 2.3E-18 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AL549_RS22695 1ed70a821334e5fb48c80ad6b602b3d9 346 SUPERFAMILY SSF103481 69 170 7.32E-13 T 28-03-2018 AL549_RS22695 1ed70a821334e5fb48c80ad6b602b3d9 346 Pfam PF00892 EamA-like transporter family 36 168 3.2E-23 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS22695 1ed70a821334e5fb48c80ad6b602b3d9 346 Pfam PF00892 EamA-like transporter family 183 315 1.4E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL549_RS08700 b506ba2cd743208192555f5014c3ec03 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 1.1E-29 T 28-03-2018 IPR006696 Protein of unknown function DUF423 AL549_RS01765 e34b6f91cc254d04d920e763fa19d4cd 95 Pfam PF04994 TfoX C-terminal domain 1 80 4.8E-25 T 28-03-2018 IPR007077 TfoX, C-terminal AL549_RS01765 e34b6f91cc254d04d920e763fa19d4cd 95 Gene3D G3DSA:1.10.150.20 3 81 7.2E-21 T 28-03-2018 AL549_RS13180 0eb7b16e38eb7446643e107f8cbb8d70 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.4E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS17315 6465d03ad9320729cbad837ab0404afb 160 Pfam PF03918 Cytochrome C biogenesis protein 9 151 1.5E-55 T 28-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AL549_RS16755 f2bcb527f11689ab2187163e828ffd0f 515 Pfam PF11840 Protein of unknown function (DUF3360) 11 515 2.5E-269 T 28-03-2018 IPR021794 Protein of unknown function DUF3360 AL549_RS19355 1658bc31f17c463d79704ce43dc6f5f9 264 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 2.9E-27 T 28-03-2018 IPR018692 Predicted integral membrane protein DUF2189 AL549_RS23325 03718d797b571585ce11f96a80a4ff24 211 Pfam PF10986 Protein of unknown function (DUF2796) 29 206 2.4E-49 T 28-03-2018 IPR021253 Protein of unknown function DUF2796 AL549_RS15300 d2b8c5b042bcf08c61000b37995e9875 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.2E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS16835 6a8367e8c19653d65804121feda05b90 169 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 8.9E-46 T 28-03-2018 IPR018639 Domain of unknown function DUF2062 AL549_RS22410 74941bd55538b6e007ca54eefb208265 178 Pfam PF13511 Domain of unknown function (DUF4124) 9 57 3.2E-12 T 28-03-2018 IPR025392 Domain of unknown function DUF4124 AL549_RS02540 d11db3534016da56a8fa6da95a2cd0ce 161 Pfam PF04224 Protein of unknown function, DUF417 17 156 1.9E-26 T 28-03-2018 IPR007339 Protein of unknown function DUF417 AL549_RS02540 d11db3534016da56a8fa6da95a2cd0ce 161 PIRSF PIRSF028065 2 161 1.0E-69 T 28-03-2018 IPR016865 Inner membrane protein RclC AL549_RS08850 39796b8a5c4b61df65d75098604e28ca 176 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 8 164 24.602 T 28-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AL549_RS08850 39796b8a5c4b61df65d75098604e28ca 176 Gene3D G3DSA:3.30.160.150 22 173 1.2E-42 T 28-03-2018 AL549_RS08850 39796b8a5c4b61df65d75098604e28ca 176 Pfam PF04390 Lipopolysaccharide-assembly 41 159 3.0E-11 T 28-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AL549_RS12870 b1c6c84883cabeebd171ed9c1d97a26e 162 Gene3D G3DSA:3.40.1000.10 9 153 0.0015 T 28-03-2018 AL549_RS12905 f5010a40fd744fd40b696b0421e8a16b 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 5.5E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS13760 2abb3724ae4feb97291f8dbb05431ed4 44 Pfam PF11665 Protein of unknown function (DUF3265) 12 38 3.4E-10 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS19995 8eb13b5fda3ff2fa337d420f8582d275 220 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 9 220 5.9E-50 T 28-03-2018 IPR026387 Outer membrane protein AL549_RS19995 8eb13b5fda3ff2fa337d420f8582d275 220 Gene3D G3DSA:2.40.160.60 49 220 0.0015 T 28-03-2018 AL549_RS10205 a2ecc41c6edd10d03f0e885e3f776d53 212 Pfam PF01914 MarC family integral membrane protein 8 208 5.3E-65 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL549_RS10205 a2ecc41c6edd10d03f0e885e3f776d53 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 204 4.6E-66 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL549_RS05135 c05867bb0746efdaf659da86e91b0b7a 96 Pfam PF05488 PAAR motif 18 85 3.9E-25 T 28-03-2018 IPR008727 PAAR motif AL549_RS14890 b85109604a669a99648a8c672e0afd35 45 Pfam PF11665 Protein of unknown function (DUF3265) 18 45 3.9E-11 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS15175 c1d1d458cdb5ca6c47f832fc7a686596 51 Pfam PF11665 Protein of unknown function (DUF3265) 14 39 2.6E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS11935 f44eadf7f26300bfbe1d428f27bd782b 513 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 3.3E-140 T 28-03-2018 IPR002823 Protein of unknown function DUF112, transmembrane AL549_RS14915 6d84f014b1297e082254bd018f902b60 247 SUPERFAMILY SSF52141 96 211 2.71E-6 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL549_RS14915 6d84f014b1297e082254bd018f902b60 247 Gene3D G3DSA:3.40.470.10 68 222 3.2E-6 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL549_RS19245 cf94e5abcf860c05958c00651f5e8c00 86 SUPERFAMILY SSF109910 2 79 6.15E-26 T 28-03-2018 IPR005631 Flavinator of succinate dehydrogenase AL549_RS19245 cf94e5abcf860c05958c00651f5e8c00 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 2.4E-24 T 28-03-2018 IPR005631 Flavinator of succinate dehydrogenase AL549_RS19245 cf94e5abcf860c05958c00651f5e8c00 86 Gene3D G3DSA:1.10.150.250 2 86 5.4E-24 T 28-03-2018 AL549_RS15080 67198d41765f1ba9774211ed28c71930 46 Pfam PF11665 Protein of unknown function (DUF3265) 20 46 5.2E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS03640 2aae32a72f0131eee359860e7b7f604a 231 SUPERFAMILY SSF56214 110 224 8.2E-12 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL549_RS03640 2aae32a72f0131eee359860e7b7f604a 231 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 112 201 5.2E-10 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL549_RS03640 2aae32a72f0131eee359860e7b7f604a 231 Gene3D G3DSA:3.90.470.20 14 121 9.5E-14 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL549_RS03640 2aae32a72f0131eee359860e7b7f604a 231 PRINTS PR01399 Enterobactin synthetase component D signature 47 67 1.0E-16 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AL549_RS03640 2aae32a72f0131eee359860e7b7f604a 231 PRINTS PR01399 Enterobactin synthetase component D signature 77 95 1.0E-16 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AL549_RS03640 2aae32a72f0131eee359860e7b7f604a 231 PRINTS PR01399 Enterobactin synthetase component D signature 155 171 1.0E-16 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AL549_RS03640 2aae32a72f0131eee359860e7b7f604a 231 Gene3D G3DSA:3.90.470.20 122 225 2.2E-6 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL549_RS05010 fa87b422b8e19db5c0107463c94bb429 114 Pfam PF08888 HopJ type III effector protein 4 111 1.3E-50 T 28-03-2018 IPR014984 HopJ type III effector protein AL549_RS05010 fa87b422b8e19db5c0107463c94bb429 114 Gene3D G3DSA:3.20.160.10 2 112 1.2E-50 T 28-03-2018 AL549_RS00190 f23ac0baa2338240518ac302310eb3ec 305 Gene3D G3DSA:3.40.50.410 65 292 4.5E-19 T 28-03-2018 IPR002035 von Willebrand factor, type A AL549_RS00190 f23ac0baa2338240518ac302310eb3ec 305 Pfam PF01882 Protein of unknown function DUF58 53 137 1.5E-20 T 28-03-2018 IPR002881 Domain of unknown function DUF58 AL549_RS01325 afb09a4bb71b9ed96ac13d83078890d0 332 Gene3D G3DSA:1.20.5.340 102 272 8.8E-6 T 28-03-2018 AL549_RS11900 fd593acfcde811098185ede284fd8cb6 578 Pfam PF00672 HAMP domain 250 297 1.3E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS11900 fd593acfcde811098185ede284fd8cb6 578 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 364 543 8.6E-41 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS11900 fd593acfcde811098185ede284fd8cb6 578 SMART SM00304 246 300 1.4E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL549_RS11900 fd593acfcde811098185ede284fd8cb6 578 Gene3D G3DSA:1.10.287.950 351 578 5.4E-48 T 28-03-2018 AL549_RS11900 fd593acfcde811098185ede284fd8cb6 578 SUPERFAMILY SSF58104 268 577 9.94E-72 T 28-03-2018 AL549_RS11900 fd593acfcde811098185ede284fd8cb6 578 SMART SM00283 315 576 1.6E-56 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL549_RS11900 fd593acfcde811098185ede284fd8cb6 578 Gene3D G3DSA:1.20.120.230 50 350 0.002 T 28-03-2018 AL549_RS09060 8de0e40fa85e693f013b265c4c9ba528 286 Pfam PF01963 TraB family 23 275 3.1E-60 T 28-03-2018 IPR002816 Pheromone shutdown, TraB AL549_RS09295 5866a4c4c249daa50f33a73010fe20a9 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 242 5.6E-72 T 28-03-2018 IPR011435 Protein of unknown function DUF1538 AL549_RS07340 0ac8406f96f6a101d78096db0e8cf1a6 99 Gene3D G3DSA:3.30.70.860 18 95 3.2E-29 T 28-03-2018 IPR035571 UPF0234/UPF0381 domain AL549_RS07340 0ac8406f96f6a101d78096db0e8cf1a6 99 Pfam PF04175 Protein of unknown function (DUF406) 7 95 7.5E-30 T 28-03-2018 IPR005272 Conserved hypothetical protein CHP00743 AL549_RS08395 33f5b376fe54c59e7b954fef94ee284b 184 Gene3D G3DSA:1.20.120.450 19 171 4.8E-6 T 28-03-2018 AL549_RS14285 19bcff3bf72afc4a3a56bef96058a44f 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 8.4E-18 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS14595 19bcff3bf72afc4a3a56bef96058a44f 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 8.4E-18 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS05760 d43192b4273e8de721765ea56e28a546 311 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 29 291 7.2E-81 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL549_RS05760 d43192b4273e8de721765ea56e28a546 311 SUPERFAMILY SSF50891 185 295 3.3E-9 T 28-03-2018 IPR029000 Cyclophilin-like domain AL549_RS05760 d43192b4273e8de721765ea56e28a546 311 SMART SM00797 27 308 3.8E-130 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL549_RS05760 d43192b4273e8de721765ea56e28a546 311 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 6 292 3.4E-77 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL549_RS13685 acde0f9df59c07381e6c076001263e64 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 4.9E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS14850 db012827dab93585ad9c1b10e57f4f32 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 8.0E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS22475 80b1aaa526ea4140fc26196153cc6f47 309 SUPERFAMILY SSF50156 213 308 3.06E-17 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AL549_RS22475 80b1aaa526ea4140fc26196153cc6f47 309 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 35 309 6.2E-81 T 28-03-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AL549_RS22475 80b1aaa526ea4140fc26196153cc6f47 309 Gene3D G3DSA:2.30.42.10 158 308 7.2E-10 T 28-03-2018 AL549_RS22475 80b1aaa526ea4140fc26196153cc6f47 309 Pfam PF11356 Type II secretion system protein C 37 178 3.0E-41 T 28-03-2018 IPR024961 Type II secretion system protein C, N-terminal AL549_RS00010 6eca526206eadde1f567faa1c05daab7 367 SUPERFAMILY SSF69593 85 297 1.44E-8 T 28-03-2018 AL549_RS00010 6eca526206eadde1f567faa1c05daab7 367 Gene3D G3DSA:3.40.1130.10 54 337 1.1E-20 T 28-03-2018 AL549_RS00010 6eca526206eadde1f567faa1c05daab7 367 Pfam PF01553 Acyltransferase 92 240 5.7E-10 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL549_RS13805 0805a9be3956847303027d69062930bb 34 Pfam PF11665 Protein of unknown function (DUF3265) 7 34 1.3E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS07345 2e05f0c63fbbffb3324c4d3e1cb975e1 101 Pfam PF07383 Protein of unknown function (DUF1496) 42 94 8.2E-24 T 28-03-2018 IPR009971 Protein of unknown function DUF1496 AL549_RS22550 3d33c6cfe7a07f9578e7e40b13d39728 268 Gene3D G3DSA:3.40.50.2020 103 268 7.5E-25 T 28-03-2018 AL549_RS22550 3d33c6cfe7a07f9578e7e40b13d39728 268 SUPERFAMILY SSF53271 85 267 9.44E-38 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AL549_RS22550 3d33c6cfe7a07f9578e7e40b13d39728 268 Pfam PF00156 Phosphoribosyl transferase domain 170 266 1.7E-10 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL549_RS05485 ab664e074d4e5080b471fc01ec7040cb 141 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 22 110 1.0E-48 T 28-03-2018 IPR020483 Uncharacterised protein family YgbA AL549_RS05485 ab664e074d4e5080b471fc01ec7040cb 141 Pfam PF11756 Nitrous oxide-stimulated promoter 19 120 1.2E-45 T 28-03-2018 IPR020483 Uncharacterised protein family YgbA AL549_RS22655 c87972422945f0efdf7d95a15ad6dcbf 347 Gene3D G3DSA:1.10.3720.10 10 331 6.7E-39 T 28-03-2018 AL549_RS22655 c87972422945f0efdf7d95a15ad6dcbf 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 7.7E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS22655 c87972422945f0efdf7d95a15ad6dcbf 347 SUPERFAMILY SSF161098 139 325 1.7E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL549_RS08525 f8a170ce67954480117810a401b61b2b 519 Pfam PF03806 AbgT putative transporter family 19 517 1.3E-211 T 28-03-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 AL549_RS02055 1c95c9fe9448656c2975902ae3a87eb2 343 Pfam PF06674 Protein of unknown function (DUF1176) 25 332 2.7E-97 T 28-03-2018 IPR009560 Protein of unknown function DUF1176 AL549_RS17450 e85f880b046b9a7ebf1428064f2e314c 165 Pfam PF03748 Flagellar basal body-associated protein FliL 64 165 4.2E-21 T 28-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AL549_RS05685 b011250e9636ab0516d6c4a24961b5c3 293 Pfam PF11060 Protein of unknown function (DUF2861) 23 289 3.9E-96 T 28-03-2018 IPR021290 Protein of unknown function DUF2861 AL549_RS19215 ea60edd97ecef52be54700e1cf04b12e 156 PIRSF PIRSF004923 1 156 3.9E-38 T 28-03-2018 IPR026268 Protein RseC AL549_RS19215 ea60edd97ecef52be54700e1cf04b12e 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 19 149 2.3E-31 T 28-03-2018 IPR007359 Positive regulator of sigma(E), RseC/MucC AL549_RS11310 c3eb2d8d9a57b0227e8724ce7a4b058d 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 4.1E-35 T 28-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AL549_RS11310 c3eb2d8d9a57b0227e8724ce7a4b058d 77 Pfam PF06667 Phage shock protein B 4 74 9.6E-32 T 28-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AL549_RS07625 053ebd112ec625c5b2c97dd18d2d33ff 206 Pfam PF03458 UPF0126 domain 95 163 9.0E-20 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 AL549_RS07625 053ebd112ec625c5b2c97dd18d2d33ff 206 Pfam PF03458 UPF0126 domain 8 81 5.5E-23 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 AL549_RS15155 0f59e8650815b6be3bb8e240e4390f1c 46 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 5.5E-12 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS13895 e0bf0a57cfc440a9534ca94c7f774b4b 41 Pfam PF11665 Protein of unknown function (DUF3265) 14 41 8.6E-13 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS06395 fd2f7ea8dcc0569685453d685c12f8ab 784 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 102 783 3.0E-299 T 28-03-2018 IPR010706 Fatty acid cis-trans isomerase AL549_RS08130 b11066310257c306c9c6d96d752f24d0 232 Gene3D G3DSA:3.40.190.10 27 218 4.8E-4 T 28-03-2018 AL549_RS15270 b10c0c567b14e743c4709c0af29fc696 36 Pfam PF11665 Protein of unknown function (DUF3265) 10 36 1.2E-6 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS17555 0b29f463b2c701996910db2b31eebef0 110 Pfam PF13698 Domain of unknown function (DUF4156) 26 109 1.9E-22 T 28-03-2018 IPR025294 Protein of unknown function DUF4156 AL549_RS12840 5ecc0126cac4f7ba4e1616872e8d2384 300 Pfam PF14280 Domain of unknown function (DUF4365) 10 139 4.4E-31 T 28-03-2018 IPR025375 Domain of unknown function DUF4365 AL549_RS12840 5ecc0126cac4f7ba4e1616872e8d2384 300 SUPERFAMILY SSF56024 172 299 1.05E-10 T 28-03-2018 AL549_RS12840 5ecc0126cac4f7ba4e1616872e8d2384 300 Gene3D G3DSA:3.30.870.10 167 300 2.4E-12 T 28-03-2018 AL549_RS12840 5ecc0126cac4f7ba4e1616872e8d2384 300 Pfam PF13091 PLD-like domain 174 297 2.8E-13 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL549_RS14975 ee06ec038170789237031fe3843ccb8d 54 Pfam PF11665 Protein of unknown function (DUF3265) 10 37 4.1E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS03645 82a54bcbaf8d630cb4fef90429778736 112 Pfam PF04320 Protein with unknown function (DUF469) 11 111 2.5E-35 T 28-03-2018 IPR007416 Protein of unknown function DUF469 AL549_RS00345 a9ff628ccc72d3d481aa12b7840d17e9 279 Pfam PF02361 Cobalt transport protein 17 235 6.9E-32 T 28-03-2018 IPR003339 ABC/ECF transporter, transmembrane component AL549_RS18325 cafc3520d269ae48cd9a3ea9cc87c6c6 172 Pfam PF07811 TadE-like protein 14 56 2.3E-8 T 28-03-2018 IPR012495 TadE-like AL549_RS09815 1782bb8edf6e296981e49409a3acfc99 221 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 181 2.4E-32 T 28-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL549_RS21495 c9ba5deec103257356fcbc61b9520760 287 Gene3D G3DSA:2.40.160.60 15 286 7.7E-6 T 28-03-2018 AL549_RS13540 30843f17fa721c30c478b3da48dcc3d9 42 Pfam PF11665 Protein of unknown function (DUF3265) 10 36 1.1E-6 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS14875 346ab489f81d390ef4960d46ec0791ba 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.3E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS11105 adbfe73ec12ee4e5f4ee9abfd7a043b7 533 Pfam PF03553 Na+/H+ antiporter family 165 497 8.9E-106 T 28-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL549_RS16150 38ca504fcfc001663b0ac07b6f1ee572 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.2E-27 T 28-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL549_RS14580 c7c32c214b8dcfe00e4d616729188450 247 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 5.0E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS04600 6810aa508e38773b8d7d9002766369bc 319 Pfam PF03595 Voltage-dependent anion channel 12 304 5.8E-26 T 28-03-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 AL549_RS09720 6c54027905fb3d8f9daee5a795c8f3f8 185 Pfam PF04279 Intracellular septation protein A 16 157 2.9E-6 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AL549_RS22800 ea7b2b7af64338f7b5d39c258c53911d 238 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 175 5.9E-42 T 28-03-2018 IPR002654 Glycosyl transferase, family 25 AL549_RS14540 c203faa43308e2400c9b51554e8b9bfe 37 Pfam PF11665 Protein of unknown function (DUF3265) 10 37 3.7E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS12080 7a696aacca39205be81844b4b9b20e0c 222 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 216 2.3E-43 T 28-03-2018 IPR006214 Bax inhibitor 1-related AL549_RS06565 68c608243551bb056b8e9117c0621e69 292 Pfam PF00482 Type II secretion system (T2SS), protein F 154 281 6.1E-15 T 28-03-2018 IPR018076 Type II secretion system F domain AL549_RS20755 151bb4bbdf380782acf543d2cb51c149 176 Pfam PF04186 FxsA cytoplasmic membrane protein 7 114 1.3E-35 T 28-03-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 AL549_RS14060 b47f94aa6f1e24fe48fb52687ed58f26 105 Pfam PF07119 Protein of unknown function (DUF1375) 11 81 5.7E-9 T 28-03-2018 IPR010780 Protein of unknown function DUF1375 AL549_RS16335 dc82ef482de75d6927a83fbeb9ee987f 180 Pfam PF06042 Nucleotidyltransferase 25 178 7.5E-57 T 28-03-2018 IPR009267 Putative nucleotidyltransferase AL549_RS14405 2ca627381f1b74f2a405a57d86d55e91 33 Pfam PF11665 Protein of unknown function (DUF3265) 3 29 1.0E-6 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS13105 f285a62967610f671050127e7b5a3fa9 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 3.7E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS23795 cf63a4294fa9555163244a000ef2bfee 419 Pfam PF01384 Phosphate transporter family 26 407 1.5E-113 T 28-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AL549_RS15695 f55a2420b71b36c53acc6d8b875d98d3 58 Pfam PF04964 Flp/Fap pilin component 5 52 1.6E-12 T 28-03-2018 IPR007047 Flp/Fap pilin component AL549_RS08120 7b0b68b68081b8c4e7a25fc4ce8e9432 157 Gene3D G3DSA:2.40.160.20 5 157 3.8E-5 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS12855 1682cd1e56a74893505163effbfd1436 44 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.8E-17 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS13050 a29a065a01f4de8abb65c4f7fd708ffc 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 9.0E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS13355 ec8b0111709be58fe9ecf5e0932e5b52 41 Pfam PF11665 Protein of unknown function (DUF3265) 3 29 2.3E-7 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS11430 f309118cc91a1b602a364ba873a5876f 437 Gene3D G3DSA:3.40.720.10 31 431 2.3E-6 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL549_RS11430 f309118cc91a1b602a364ba873a5876f 437 Pfam PF07394 Protein of unknown function (DUF1501) 33 418 1.4E-71 T 28-03-2018 IPR010869 Protein of unknown function DUF1501 AL549_RS13675 2b50e7933f66bd5fbc1573d48f289c56 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.7E-18 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS20790 076c40d1376e610075f201cd6a135973 567 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 558 2.6E-262 T 28-03-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily AL549_RS20790 076c40d1376e610075f201cd6a135973 567 Pfam PF00474 Sodium:solute symporter family 368 489 3.0E-19 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL549_RS20790 076c40d1376e610075f201cd6a135973 567 Pfam PF00474 Sodium:solute symporter family 33 302 2.8E-33 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL549_RS04095 1343e72c7b3fb35b1e5435334779fa34 168 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 22 149 2.1E-25 T 28-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL549_RS21205 757f88f5203c97f1a3a871e2bc40d859 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 3.6E-18 T 28-03-2018 IPR009525 Protein of unknown function DUF1145 AL549_RS18550 ba5c9150365485f49224f30c698c98f9 1180 Pfam PF05488 PAAR motif 18 86 6.8E-22 T 28-03-2018 IPR008727 PAAR motif AL549_RS16630 d1f9928125852b0d360570d7df80c114 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 4.4E-42 T 28-03-2018 IPR019633 Protein of unknown function DUF2498 AL549_RS05745 905131d634280cf8b6f3561a647b2a53 195 Pfam PF13689 Domain of unknown function (DUF4154) 53 185 5.5E-26 T 28-03-2018 IPR025293 Protein of unknown function DUF4154 AL549_RS12515 e4ee5bd518bef72183214521abe4bfce 158 Pfam PF05751 FixH 7 147 2.1E-44 T 28-03-2018 IPR008620 Nitrogen fixation protein FixH AL549_RS18965 cc666c60f9d932bd816b6eb2013c9b0d 264 Pfam PF01578 Cytochrome C assembly protein 37 262 1.8E-45 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL549_RS21315 cf5961780c80f437b8a63eff5b48a619 233 Gene3D G3DSA:3.30.450.40 43 220 1.6E-5 T 28-03-2018 IPR029016 GAF domain-like AL549_RS21315 cf5961780c80f437b8a63eff5b48a619 233 Pfam PF04340 Protein of unknown function, DUF484 6 216 1.1E-69 T 28-03-2018 IPR007435 Protein of unknown function DUF484 AL549_RS15915 9b672f2a62516f30b6832376d55b8c9e 319 Pfam PF14321 Domain of unknown function (DUF4382) 29 176 2.7E-24 T 28-03-2018 IPR025491 Domain of unknown function DUF4382 AL549_RS05435 7a4f313a364363f14824d833b9ae576d 162 Pfam PF01936 NYN domain 7 155 1.3E-40 T 28-03-2018 IPR021139 NYN domain, limkain-b1-type AL549_RS05435 7a4f313a364363f14824d833b9ae576d 162 Gene3D G3DSA:3.40.50.1010 2 161 2.1E-36 T 28-03-2018 IPR029060 PIN domain-like AL549_RS21680 0fda6be8505e3fa16ead00f67de2db7c 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 6.0E-20 T 28-03-2018 IPR001727 Gdt1 family AL549_RS21680 0fda6be8505e3fa16ead00f67de2db7c 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 2.5E-20 T 28-03-2018 IPR001727 Gdt1 family AL549_RS20640 04af7342727beae7ae8c3c8923f020a7 317 SUPERFAMILY SSF64182 5 316 4.71E-41 T 28-03-2018 AL549_RS01340 626f47b4b7a0b381b4c95534e400bbe2 332 Pfam PF11168 Protein of unknown function (DUF2955) 9 148 1.1E-35 T 28-03-2018 IPR022604 Protein of unknown function DUF2955 AL549_RS00520 b7c7dc2287eb7b3a8ad13027bcd5eb64 94 Gene3D G3DSA:1.10.1220.10 2 42 7.5E-9 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL549_RS00520 b7c7dc2287eb7b3a8ad13027bcd5eb64 94 Pfam PF04221 RelB antitoxin 5 44 4.8E-5 T 28-03-2018 IPR007337 RelB antitoxin/Antitoxin DinJ AL549_RS13365 75a3eda2aa3fcbc55e5465aabb376829 43 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 7.3E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS00140 5ada0d84e19145652f0d2aaf85938694 455 Pfam PF01943 Polysaccharide biosynthesis protein 46 316 5.5E-7 T 28-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AL549_RS00480 7c71354c47776388088f5e57629a0627 242 Pfam PF06629 MltA-interacting protein MipA 33 242 2.4E-34 T 28-03-2018 IPR010583 MltA-interacting MipA AL549_RS00480 7c71354c47776388088f5e57629a0627 242 Gene3D G3DSA:2.40.160.20 13 242 8.2E-9 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL549_RS00145 47457e68ac8650616e38c34e198ac9c5 107 Pfam PF04892 VanZ like family 35 95 5.0E-9 T 28-03-2018 IPR006976 VanZ-like AL549_RS13070 a568007c1108e2bbcd7a35e610d2e746 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 6.2E-13 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS00660 169190f4030f6658873fcc1d279f4833 179 Pfam PF13689 Domain of unknown function (DUF4154) 35 171 3.5E-23 T 28-03-2018 IPR025293 Protein of unknown function DUF4154 AL549_RS11405 56fe2a5a2ef8a0f972b7b074410dfd07 148 Pfam PF03724 META domain 34 141 1.9E-26 T 28-03-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AL549_RS06570 d7a2319e66ec808bc6e903f009f4871b 305 Pfam PF00482 Type II secretion system (T2SS), protein F 137 261 8.5E-18 T 28-03-2018 IPR018076 Type II secretion system F domain AL549_RS15165 089a49d056a008e83d62c62ee939362f 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.8E-11 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS19415 d7c1d01039fc47e4dc78d7bfcae595a8 185 Pfam PF02325 YGGT family 10 77 3.2E-19 T 28-03-2018 IPR003425 CCB3/YggT GO:0016020 AL549_RS19415 d7c1d01039fc47e4dc78d7bfcae595a8 185 Pfam PF02325 YGGT family 109 173 1.9E-19 T 28-03-2018 IPR003425 CCB3/YggT GO:0016020 AL549_RS05540 ffc73d7b016b344a713670021239901c 140 Pfam PF04143 Sulphur transport 3 126 3.6E-11 T 28-03-2018 IPR007272 Sulphur transport domain AL549_RS10650 7464ecf875d45ba1d1710d6682afdd0f 702 Pfam PF05170 AsmA family 1 593 3.5E-121 T 28-03-2018 IPR007844 AsmA AL549_RS14305 3aea1e792f492bb6209ab3d8f16a8256 40 Pfam PF11665 Protein of unknown function (DUF3265) 10 36 2.0E-6 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS06260 fce3b46beefb18e7312e184cb3e22497 183 Pfam PF14316 Domain of unknown function (DUF4381) 15 156 1.3E-25 T 28-03-2018 IPR025489 Protein of unknown function (DUF4381 AL549_RS14560 9958570f3935279ba6dcc46d3107ded3 55 Pfam PF11665 Protein of unknown function (DUF3265) 12 39 1.5E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS05430 57ac16b080134f8681ba3baeb3d555e7 143 Pfam PF13778 Domain of unknown function (DUF4174) 21 133 1.8E-26 T 28-03-2018 IPR025232 Domain of unknown function DUF4174 AL549_RS13280 d575d573d17790e5c96aca69c81123f1 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.8E-16 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS17580 8b981aa99a22b281e9f3763bb72523f3 68 Pfam PF11446 Protein of unknown function (DUF2897) 5 57 5.8E-22 T 28-03-2018 IPR021550 Protein of unknown function DUF2897 AL549_RS06995 e4ae137ac6c7a5e2f3f7f6b3f557c0b1 310 SUPERFAMILY SSF64182 3 307 2.75E-12 T 28-03-2018 AL549_RS06995 e4ae137ac6c7a5e2f3f7f6b3f557c0b1 310 PIRSF PIRSF028235 1 310 5.3E-217 T 28-03-2018 IPR016877 Uncharacterised conserved protein UCP028235 AL549_RS21470 d48ddbda7377b7cf8171bdf2a0351014 265 Gene3D G3DSA:1.20.1170.10 38 184 0.0013 T 28-03-2018 AL549_RS21935 6dda2dc52cde2288cdbf4a75855b929d 266 Pfam PF07070 SpoOM protein 6 222 5.1E-77 T 28-03-2018 IPR009776 Sporulation stage 0, protein M AL549_RS15660 5fc853958cdc53b7034a02c767d4565c 294 Pfam PF00482 Type II secretion system (T2SS), protein F 127 252 7.2E-18 T 28-03-2018 IPR018076 Type II secretion system F domain AL549_RS09680 c9d4b9bd67c7612246de509fdf0299ad 217 Pfam PF11659 Protein of unknown function (DUF3261) 66 209 1.7E-33 T 28-03-2018 IPR021675 Protein of unknown function DUF3261 AL549_RS01280 4f4beb8d393240243657d8162c6e4adb 335 Gene3D G3DSA:1.10.3470.10 28 330 2.7E-31 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL549_RS01280 4f4beb8d393240243657d8162c6e4adb 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 324 2.4E-47 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL549_RS00935 6629b0ce39e450cd0eb8eed5b48600cc 1222 Gene3D G3DSA:4.10.1080.10 321 466 0.045 T 28-03-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AL549_RS00935 6629b0ce39e450cd0eb8eed5b48600cc 1222 Gene3D G3DSA:4.10.1080.10 202 320 4.9E-9 T 28-03-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AL549_RS09050 3cd540c6b2c65b6d8280e73ab234bd9d 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 3.2E-14 T 28-03-2018 IPR021494 Protein of unknown function DUF3149 AL549_RS11675 958d0fdf58afc1c329ab3f17a06ac5d5 123 Pfam PF03788 LrgA family 23 114 4.1E-26 T 28-03-2018 IPR005538 LrgA/CidA family GO:0016021 AL549_RS22385 e0372f5fb3dbf7ab8a6801f856189e1f 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 146 4.6E-45 T 28-03-2018 IPR019617 Domain of unknown function DUF2489 AL549_RS22130 bbf46feed1974022103a5a1947dccf32 257 Pfam PF09836 Putative DNA-binding domain 5 96 1.0E-21 T 28-03-2018 IPR018640 Putative DNA-binding domain, bacteria AL549_RS11205 d458c4f534e0718de2fff8ccb2bb5d7f 461 Gene3D G3DSA:3.40.190.10 4 443 9.6E-4 T 28-03-2018 AL549_RS04750 c02ebe596916ace262ac5d17337cfcaf 86 Pfam PF11216 Protein of unknown function (DUF3012) 20 51 2.7E-18 T 28-03-2018 IPR021379 Protein of unknown function DUF3012 AL549_RS04750 c02ebe596916ace262ac5d17337cfcaf 86 Pfam PF11216 Protein of unknown function (DUF3012) 55 86 1.0E-18 T 28-03-2018 IPR021379 Protein of unknown function DUF3012 AL549_RS23330 3f4c42837d4d9d40a79571fe97a9c5a4 97 Pfam PF10795 Protein of unknown function (DUF2607) 2 96 2.1E-37 T 28-03-2018 IPR019731 Protein of unknown function DUF2607 AL549_RS14475 93b3db768921a7dc4b7834996c2cb9f0 50 Pfam PF11665 Protein of unknown function (DUF3265) 23 50 4.7E-10 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS12265 d16d53f045b02c8ca03b9c78818765c7 453 Pfam PF04932 O-Antigen ligase 240 376 6.9E-19 T 28-03-2018 IPR007016 O-antigen ligase-related AL549_RS12035 99129639442c211ed91bf1961108687d 116 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 6.1E-33 T 28-03-2018 IPR021284 Protein of unknown function DUF2750 AL549_RS18110 780fa5ad21600dfe54ce996ca1a72375 155 Pfam PF11012 Protein of unknown function (DUF2850) 69 146 2.0E-31 T 28-03-2018 IPR021271 Protein of unknown function DUF2850 AL549_RS22995 07e3f6ee97fb5dcef31f8ef23afceea4 268 Pfam PF04991 LicD family 28 236 1.4E-37 T 28-03-2018 IPR007074 LicD family AL549_RS12270 71f16eb765954c0a35d02ed9450d08c4 486 Pfam PF01943 Polysaccharide biosynthesis protein 12 273 7.8E-12 T 28-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AL549_RS12365 b2a4fe844b849148c47c11117ea258de 893 Pfam PF02470 MlaD protein 171 231 1.1E-6 T 28-03-2018 IPR003399 Mce/MlaD AL549_RS12365 b2a4fe844b849148c47c11117ea258de 893 Pfam PF02470 MlaD protein 291 382 1.2E-6 T 28-03-2018 IPR003399 Mce/MlaD AL549_RS12365 b2a4fe844b849148c47c11117ea258de 893 Pfam PF02470 MlaD protein 407 478 5.1E-6 T 28-03-2018 IPR003399 Mce/MlaD AL549_RS12365 b2a4fe844b849148c47c11117ea258de 893 Pfam PF02470 MlaD protein 55 146 7.8E-14 T 28-03-2018 IPR003399 Mce/MlaD AL549_RS12365 b2a4fe844b849148c47c11117ea258de 893 Pfam PF02470 MlaD protein 764 840 1.3E-6 T 28-03-2018 IPR003399 Mce/MlaD AL549_RS04360 e61977d803e5fd9c7ce9b2035f687121 505 Pfam PF00474 Sodium:solute symporter family 34 416 1.1E-45 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL549_RS04510 d4b129dc9faf43dff6ac12061d419440 348 Pfam PF02628 Cytochrome oxidase assembly protein 13 324 3.4E-84 T 28-03-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 AL549_RS09455 1d102989d9eda741ef916b993c10e1c8 253 Pfam PF08907 Domain of unknown function (DUF1853) 9 213 3.9E-38 T 28-03-2018 IPR015003 Protein of unknown function DUF1853 AL549_RS12835 7ed44dee9d995ed1ac17ed8e252e0722 40 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 1.9E-10 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS12760 1be2bc65d65fc681396e7d672b209bed 114 Pfam PF12290 Protein of unknown function (DUF3802) 2 110 7.4E-42 T 28-03-2018 IPR020979 Uncharacterised protein family A0KLC6 AL549_RS09325 f22954977851232d637ea7071cb24bcd 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 249 9.4E-40 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL549_RS08860 f3ebf12ed6738097df6cd4824bf4559d 156 Pfam PF07295 Zinc-ribbon containing domain 14 152 2.6E-47 T 28-03-2018 IPR009912 Zinc-ribbon containing domain AL549_RS07170 b6ae3d8601bd7b5eb3680a6f8024c801 365 Pfam PF12060 Domain of unknown function (DUF3541) 30 252 8.3E-117 T 28-03-2018 IPR021928 Protein of unknown function DUF3541 AL549_RS03180 994d017883ad93e83025f91edbde8528 484 Pfam PF11840 Protein of unknown function (DUF3360) 3 484 7.4E-253 T 28-03-2018 IPR021794 Protein of unknown function DUF3360 AL549_RS13080 9cfa628dac2531ab6cf71c4a4a0181b4 205 Pfam PF07799 Protein of unknown function (DUF1643) 31 182 6.1E-5 T 28-03-2018 IPR012441 Protein of unknown function DUF1643 AL549_RS10900 f63b27d1fe23e0b5a719db4d4dc6589b 420 Pfam PF09375 Imelysin 40 398 1.5E-98 T 28-03-2018 IPR018976 Peptidase M75, Imelysin AL549_RS00250 1a7df6d8b048dc957391dfc6fbc74926 239 Pfam PF07603 Protein of unknown function (DUF1566) 95 236 3.7E-21 T 28-03-2018 IPR011460 Protein of unknown function DUF1566 AL549_RS14950 3b41f9e972431419b3c592d84d9f6a06 98 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 93 1.5E-14 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL549_RS07310 6336ee0de80f912dd236b208d559f279 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 95 194 4.1E-22 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL549_RS21580 7a4f833744ffbcc11ef2968fe01389c3 83 Pfam PF04380 Membrane fusogenic activity 1 78 1.4E-27 T 28-03-2018 IPR007475 Membrane fusogenic activity AL549_RS01615 708281c9630527376cdf671a825354c4 306 Pfam PF04018 Domain of unknown function (DUF368) 13 257 2.0E-96 T 28-03-2018 IPR007163 Protein of unknown function DUF368 AL549_RS12925 6190ba05b7e45cc615b0f3b55b235def 160 SUPERFAMILY SSF81301 1 155 4.36E-36 T 28-03-2018 AL549_RS14615 bedc43f373c0a018e01295b7cff8c06b 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 8.9E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS22140 d5288a1aa4178f75531a87f21cfc276c 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 4.7E-22 T 28-03-2018 IPR018740 Protein of unknown function DUF2282, integral membrane AL549_RS12660 e2a393ac48ee55a26062e7fd251584f8 195 Pfam PF11748 Protein of unknown function (DUF3306) 5 112 3.4E-20 T 28-03-2018 IPR021735 Protein of unknown function DUF3306 AL549_RS13075 3466749d02398b04414f76ecb22962b5 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 4.2E-14 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS08400 685948b5b4e87df31f6318b6b127fc13 251 Pfam PF05742 Transport and Golgi organisation 2 1 120 3.8E-9 T 28-03-2018 IPR008551 Transport and Golgi organisation protein 2 AL549_RS13725 33450cf4761788e6e473693d71a4a1d5 171 Pfam PF14113 Type VI secretion system (T6SS), amidase effector protein 4 30 167 4.4E-26 T 28-03-2018 IPR025562 Type VI secretion system (T6SS), amidase effector protein 4 AL549_RS07865 4b40bb6ebe1d21adc51fa43ad39fcc1a 382 Pfam PF02690 Na+/Pi-cotransporter 30 150 1.6E-20 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AL549_RS07865 4b40bb6ebe1d21adc51fa43ad39fcc1a 382 Pfam PF02690 Na+/Pi-cotransporter 218 326 8.0E-19 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AL549_RS18680 b81ae138edca531aaae048e2aa493e36 361 Pfam PF01594 AI-2E family transporter 14 347 1.0E-52 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like AL549_RS17045 09f72c66551dceeee90c3c6d07f8d5db 1114 Gene3D G3DSA:1.10.443.10 567 834 1.2E-4 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL549_RS11255 c03257556f91162dc803a55f1ec8c33c 404 Pfam PF11449 Putative, 10TM heavy-metal exporter 41 402 4.8E-164 T 28-03-2018 IPR021552 Putative, 10TM heavy-metal exporter AL549_RS12530 0d4416a27a2d3d42d0e9a159a520417f 225 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 212 2.5E-55 T 28-03-2018 AL549_RS07845 0d65caba76dfa452a44901dd49f2dc2a 263 Pfam PF01925 Sulfite exporter TauE/SafE 10 261 1.4E-50 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL549_RS22455 23ca05e8cedb0a89a49748f557673cd1 646 Pfam PF05170 AsmA family 1 571 1.9E-180 T 28-03-2018 IPR007844 AsmA AL549_RS17635 187bc8d015991e880dbf5729d79b8990 144 Pfam PF09842 Predicted membrane protein (DUF2069) 16 118 1.1E-33 T 28-03-2018 IPR018643 Protein of unknown function DUF2069, membrane AL549_RS14650 a8bb74c8edd35bc8f606372b87288069 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.1E-15 T 28-03-2018 IPR021681 Protein of unknown function DUF3265 AL549_RS16595 2189dfa501854efd58f7588ea4b09376 225 Pfam PF09335 SNARE associated Golgi protein 66 181 3.5E-23 T 28-03-2018 IPR032816 SNARE associated Golgi protein AL549_RS05170 ac376bbd4fa4648460e8e229849f390e 250 Pfam PF15575 Immunity protein 49 88 246 1.8E-7 T 28-03-2018 IPR029074 Immunity protein 49 AL549_RS21240 0dd03139829a509c0f76c51e193e7b51 337 Pfam PF01757 Acyltransferase family 7 327 1.7E-36 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AL549_RS03270 36d3393ff9bcb3ac01873253598d0351 590 Pfam PF00474 Sodium:solute symporter family 33 422 1.8E-36 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL549_RS11760 b9d3bfbe9304ed8097e6f9eea60d213d 170 Pfam PF01863 Protein of unknown function DUF45 94 150 1.3E-9 T 28-03-2018 IPR002725 Protein of unknown function DUF45 AL549_RS19370 a031aa548294e049f452cefc277650d3 444 Gene3D G3DSA:3.40.390.10 83 389 3.1E-4 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AL549_RS11610 d422fe90f23cad363db55fd3e83b2ac4 219 Pfam PF10014 2OG-Fe dioxygenase 25 209 1.3E-53 T 28-03-2018 IPR018724 2OG-Fe dioxygenase AL549_RS16310 e5bed211ef0709484e2fd7c9c3047ac1 256 Pfam PF03741 Integral membrane protein TerC family 16 203 9.0E-43 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AL549_RS08510 df1ce216add4005e4327059b4800d7d7 222 PIRSF PIRSF004525 8 222 2.0E-8 T 28-03-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted